Your job contains 1 sequence.
>012404
MCTENECCLHRTGIFDSDPTVMPKATELKKELQKLVRLIVDDVDYRTETIDQARDTLCAL
KELKTKKRSLSLKLHETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRT
CPRTQQVLSHTILTPNHLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKK
MSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDV
ITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIG
KSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVD
ELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWK
AMREEESTHGTISKLAQDGTARAKRKATGILERLKRTVNLTHTA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012404
(464 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 1429 2.8e-146 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 802 7.6e-80 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 745 8.4e-74 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 735 9.6e-73 1
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 690 5.6e-68 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 681 5.1e-67 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 671 5.8e-66 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 669 9.4e-66 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 658 1.4e-64 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 654 3.7e-64 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 598 3.2e-58 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 386 3.9e-56 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 488 2.9e-46 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 462 1.1e-43 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 461 3.2e-43 1
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 410 1.2e-37 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 398 4.9e-37 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 381 3.1e-35 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 364 2.0e-33 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 281 9.5e-32 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 237 1.3e-30 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 344 2.3e-30 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 335 2.3e-30 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 257 3.0e-30 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 340 4.7e-30 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 332 4.9e-30 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 315 3.1e-28 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 316 3.9e-26 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 284 3.0e-23 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 286 1.1e-22 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 235 1.3e-21 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 223 4.1e-19 2
UNIPROTKB|Q6K762 - symbol:PUB73 "U-box domain-containing ... 250 1.9e-18 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 252 2.0e-18 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 247 3.7e-18 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 212 5.8e-17 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 222 1.3e-15 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 221 1.4e-15 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 220 1.8e-15 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 193 6.2e-15 2
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 216 6.7e-15 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 212 2.0e-14 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 206 7.8e-14 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 203 1.6e-13 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 202 1.9e-13 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 180 9.3e-11 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 174 1.2e-10 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 175 3.1e-10 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 142 7.4e-10 2
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 170 1.1e-09 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 168 1.9e-09 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 168 1.9e-09 1
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 164 2.2e-09 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 154 2.5e-09 2
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 163 2.8e-09 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 166 3.2e-09 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 164 5.3e-09 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 163 8.0e-09 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 160 1.5e-08 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 160 1.5e-08 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 158 3.3e-08 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 155 3.7e-08 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 156 8.9e-08 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 153 1.2e-07 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 145 5.7e-07 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 145 1.5e-06 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 144 1.9e-06 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 144 1.9e-06 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 140 3.3e-06 1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 140 3.3e-06 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 140 3.3e-06 1
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 140 6.2e-06 1
TAIR|locus:2056529 - symbol:AT2G05810 "AT2G05810" species... 137 7.0e-06 1
TAIR|locus:2055033 - symbol:ARABIDILLO-1 "AT2G44900" spec... 139 7.9e-06 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 133 8.8e-06 1
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 134 1.4e-05 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 136 1.5e-05 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 134 2.3e-05 1
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 127 8.5e-05 1
UNIPROTKB|Q7Z5J8 - symbol:ANKAR "Ankyrin and armadillo re... 131 9.9e-05 1
TAIR|locus:2204700 - symbol:AT1G77460 "AT1G77460" species... 132 0.00012 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 127 0.00013 1
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi... 125 0.00013 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 122 0.00026 1
TAIR|locus:2025497 - symbol:ARK2 "armadillo repeat kinesi... 123 0.00043 1
UNIPROTKB|I3LQG8 - symbol:LOC100737278 "Uncharacterized p... 115 0.00056 1
FB|FBgn0032467 - symbol:CG9934 species:7227 "Drosophila m... 122 0.00078 1
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
Identities = 290/463 (62%), Positives = 362/463 (78%)
Query: 11 RTGIFDSDPTVMPKATELKKELQKLVRLIVDDVDYRTETIDQARDTLCAXXXXXXXXXXX 70
+TG+FDSDPT + KA ELK+E++KL+ I D+ D +TIDQ +D L A
Sbjct: 3 KTGVFDSDPTAIAKAKELKREMKKLLIKIDDEDDLGVQTIDQLQDALSALREATMRKMAK 62
Query: 71 XXXXH--ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVL 128
ETVSCPEEF+CPLS ELMRDPV+LASGQT+D+ +IQ+WL +GNRTCP+TQQVL
Sbjct: 63 SSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVL 122
Query: 129 SHTILTPNHLIREMISQWCRSQGIELPNSVQ--YINE-EGITEADRDHFLSLLKKMSAT- 184
HT LTPN LIREMIS+WC+ G+E + +NE E +T +DR+ F SLL K+S++
Sbjct: 123 PHTALTPNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSN 182
Query: 185 LPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPN--LQEDVIT 242
L DQ AAKELRLLT++ FRALFGES D I +L++PL +G NP+ LQEDV+T
Sbjct: 183 LQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLL-----HGSNPDEKLQEDVVT 237
Query: 243 TLLNLSIHDN-NKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK 301
TLLN+SIHD+ NKKLV E P VIPLL+DALR GT+ TRSNAAAA+FTLSALDSNK +IGK
Sbjct: 238 TLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGK 297
Query: 302 SGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDE 361
SG LKPLIDLL+EG+ A+KDVA+AIF LCI HEN++RAVRDG V V+ KKI +G++VDE
Sbjct: 298 SGILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDE 357
Query: 362 LLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKA 421
LLAILAML T+ +AVEE+G+LGGVS +L+I RES C RNKEN I ILHTIC SDRTKWK
Sbjct: 358 LLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWKE 417
Query: 422 MREEESTHGTISKLAQDGTARAKRKATGILERLKRTVNLTHTA 464
++EEE+ HGTI+KL+++GT+RA+RKA GIL+RL++ +NLTHTA
Sbjct: 418 IKEEENAHGTITKLSREGTSRAQRKANGILDRLRKAMNLTHTA 460
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 178/386 (46%), Positives = 252/386 (65%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
V P+EF C LS +M +PVI+ASGQT+++ YI WLK RTCP+T+QVLSH + PNH
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNH 128
Query: 138 LIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSAT--LPDQTEAAKEL 195
LI ++I+QWC + Q ++E + E +LL+++S++ + DQ EAAKEL
Sbjct: 129 LISDLITQWCLVNKYDH----QKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKEL 184
Query: 196 RLLTKRMPSFRALFGES-HDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK 254
R TK+ P+ R F HD+I +LLSPLS + LQE+++T L NLSI ++NK
Sbjct: 185 RHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESNK 244
Query: 255 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 314
++AE +VIPLL +L+ GT ETR NAAA L +LSA+DSNK +IG S A+K LIDL++E
Sbjct: 245 TVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEE 304
Query: 315 GHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHR 374
G A K+ S +FNLCI ENK + V G + KKI G +VDELL++LA++ST++R
Sbjct: 305 GDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLALISTHNR 364
Query: 375 AVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTIC--LSDRTKWKAMREEESTHGTI 432
AVEE+ LG + + I+R+ + EN + I+ + DR++ K + EEE+ HGT
Sbjct: 365 AVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSRLKVVGEEENQHGTF 424
Query: 433 SKLAQDGTARAKRKATGILERLKRTV 458
+KLA+ G+ RA RKA GIL+ +KR V
Sbjct: 425 TKLAKQGSVRAARKAQGILQWIKRFV 450
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 164/384 (42%), Positives = 245/384 (63%)
Query: 75 HETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILT 134
H + P+EF+CP+S ELM+DPVI++SGQT++R IQ+WL +G++TCP+TQQ LSHT LT
Sbjct: 223 HRSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLT 282
Query: 135 PNHLIREMISQWCRSQGIELPNSVQYINEEGITEA-DRDH--FLSLLKKM-SATLPDQTE 190
PN +++ +ISQWC + GIELP + Q ++ ++ D DH +SL+ ++ S +Q
Sbjct: 283 PNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQDEQRA 342
Query: 191 AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIH 250
AA E+RLL KR + R E+ AIP L++ LS S +P QE +T LLNLSIH
Sbjct: 343 AAGEIRLLAKRNVNNRICIAEA-GAIPLLVNLLSSS------DPRTQEHAVTALLNLSIH 395
Query: 251 DNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLID 310
+NNK + ++ IP +++ L++G++ETR NAAA LF+LS +D NK IG +GA+ PLI+
Sbjct: 396 ENNKASIVDSH-AIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLIN 454
Query: 311 LLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAILAM 368
LL +G KD A+AIFNLCI NK RAV+ G V ++ ++D G +DE L++L++
Sbjct: 455 LLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSI 514
Query: 369 LSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEEST 428
L+ N I + ++ +I+ + RN+EN AIL +C +D T+ +
Sbjct: 515 LAGNPEGKIVIARSEPIPPLVEVIKTGS-PRNRENAAAILWLLCSAD-TEQTLAAKAAGV 572
Query: 429 HGTISKLAQDGTARAKRKATGILE 452
+ +L++ GT RAKRKA+ ILE
Sbjct: 573 EDALKELSETGTDRAKRKASSILE 596
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 165/397 (41%), Positives = 241/397 (60%)
Query: 75 HETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILT 134
H + PE F+CP+S ELM+DPVI+++GQT++R IQ+WL AG++TCP++Q+ L H LT
Sbjct: 243 HRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLT 302
Query: 135 PNHLIREMISQWCRSQGIELPNS-----VQYINEEGITEADRDHFLSLLKKMS-ATLPDQ 188
PN++++ +I+ WC S GIELP + I ++ DR LSLL+K++ T Q
Sbjct: 303 PNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQ 362
Query: 189 TEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLS 248
AA ELRLL KR R E+ AIP L+ LS +P QE +T LLNLS
Sbjct: 363 RAAAGELRLLAKRNVDNRVCIAEA-GAIPLLVELLSSP------DPRTQEHSVTALLNLS 415
Query: 249 IHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPL 308
I++ NK + + + ++ + L++G++E R NAAA LF+LS +D NK IG +GA++ L
Sbjct: 416 INEGNKGAIVDAGAITDIV-EVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQAL 474
Query: 309 IDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAIL 366
I LL+EG + KD A+AIFNLCI NK+RAV+ G V + + + D G VDE LAIL
Sbjct: 475 ISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAIL 534
Query: 367 AMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEE 426
A+LSTN I + + ++ IIR + RN+EN AIL +C+ + + RE
Sbjct: 535 AILSTNQEGKTAIAEAESIPVLVEIIRTGS-PRNRENAAAILWYLCIGNIERLNVAREV- 592
Query: 427 STHGTISKLAQDGTARAKRKATGILERLKRTVNLTHT 463
+ +L ++GT RAKRKA +LE +++T + T
Sbjct: 593 GADVALKELTENGTDRAKRKAASLLELIQQTEGVAVT 629
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 158/385 (41%), Positives = 231/385 (60%)
Query: 76 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTP 135
+ ++ P +F CP+S ELM+DPVI+A+GQT++R YIQRW+ GN TCP+TQQ L + LTP
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTP 296
Query: 136 NHLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA-TLPDQTEAAKE 194
N+++R +IS+WC IE P YIN D +L++++S+ + D+ A E
Sbjct: 297 NYVLRSLISRWCAEHNIEQPAG--YINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSE 354
Query: 195 LRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK 254
+R L+KR R L E+ AIP L++ L+ QE+ IT +LNLSI++NNK
Sbjct: 355 IRSLSKRSTDNRILIAEA-GAIPVLVNLLTSEDVAT------QENAITCVLNLSIYENNK 407
Query: 255 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 314
+L+ V ++ LR+GT+E R NAAA LF+LS D NK +IG SGA+ L+DLL+
Sbjct: 408 ELIMFAGAVTSIVQ-VLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLEN 466
Query: 315 GHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGV-H--VDELLAILAMLST 371
G KD A+A+FNLCI H NK RAVR G V+ ++K + D H VDE L IL++L+
Sbjct: 467 GTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLAN 526
Query: 372 NHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGT 431
N A I + ++ I++ RN+EN AIL ++C D K + +
Sbjct: 527 NQDAKSAIVKANTLPALIGILQTDQT-RNRENAAAILLSLCKRDTEKLITIGRLGAVV-P 584
Query: 432 ISKLAQDGTARAKRKATGILERLKR 456
+ L+++GT R KRKA +LE L++
Sbjct: 585 LMDLSKNGTERGKRKAISLLELLRK 609
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 156/385 (40%), Positives = 232/385 (60%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
++ P+EF+CP+S ELM+DPVI+++GQT++R I++W+ +G+ TCP TQQ +S + LTPN+
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 138 LIREMISQWCRSQGIELPNSVQYINEE--GITEADRDHFLSLLKKM-SATLPDQTEAAKE 194
++R +ISQWC + G+E P N+ + ++R + +LL K+ S +Q AA E
Sbjct: 331 VLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAE 390
Query: 195 LRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK 254
LRLL KR + R E+ AIP LLS LS S QE +T LLNLSIH++NK
Sbjct: 391 LRLLAKRNANNRICIAEA-GAIPLLLSLLSSSDLRT------QEHAVTALLNLSIHEDNK 443
Query: 255 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 314
+ + V P ++ L++G++E R NAAA LF+LS +D K IG GA+ L+ LL E
Sbjct: 444 ASIISSGAV-PSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGE 502
Query: 315 GHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHVDELLAILAMLSTN 372
G Q KD A+A+FNLCI NK RA+R G V +I+ + + G +DE +AIL++LS++
Sbjct: 503 GSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSH 562
Query: 373 HRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEE-STHGT 431
IG V ++ +I T RN+EN A++ +C + R +E
Sbjct: 563 PEGKAAIGAAEPVPVLVEMIGSGT-PRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVP 621
Query: 432 ISKLAQDGTARAKRKATGILERLKR 456
+ +LA +GT R KRKA +LER+ R
Sbjct: 622 LRELALNGTDRGKRKAVQLLERMSR 646
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 153/384 (39%), Positives = 228/384 (59%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P++F+CP+S E+MRDPVI++SGQT++R I++W++ G+ TCP+TQQ L+ T LTPN+++R
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLR 316
Query: 141 EMISQWCRSQGIELPNSVQYINEEGITE----ADRDHFLSLLKKMSATLP-DQTEAAKEL 195
+I+QWC + IE P + ++ A+ + L+ +++ P DQ AA E+
Sbjct: 317 SLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQRSAAGEI 376
Query: 196 RLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKK 255
RLL KR R E+ AIP L+ LS + +QE +T LLNLSI +NNK
Sbjct: 377 RLLAKRNADNRVAIAEA-GAIPLLVGLLSTP------DSRIQEHSVTALLNLSICENNKG 429
Query: 256 LVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEG 315
+ IP ++ L+ G++E R NAAA LF+LS +D NK IG GA+ PL+ LL+EG
Sbjct: 430 AIVSAG-AIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEG 488
Query: 316 HQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD---GVHVDELLAILAMLSTN 372
Q KD A+A+FNLCI NK +A+R G + + + + + G+ VDE LAILA+LS++
Sbjct: 489 TQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGM-VDEALAILAILSSH 547
Query: 373 HRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTI 432
IG V ++ IR + RN+EN A+L +C D + ++ G +
Sbjct: 548 PEGKAIIGSSDAVPSLVEFIRTGS-PRNRENAAAVLVHLCSGD-PQHLVEAQKLGLMGPL 605
Query: 433 SKLAQDGTARAKRKATGILERLKR 456
LA +GT R KRKA +LER+ R
Sbjct: 606 IDLAGNGTDRGKRKAAQLLERISR 629
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 168/438 (38%), Positives = 253/438 (57%)
Query: 28 LKKELQKLVRLIVDD--VDYRTET---IDQARDTLCAXXXXXXXXXXXXXXXHETVSCPE 82
L++EL+K++ ++D V R ET ID+A L +V P+
Sbjct: 18 LRRELKKVLTENLNDGGVKDRVETVKSIDEAIRILNRLKIVESKKRKRESDS-SSVEVPK 76
Query: 83 EFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIREM 142
EFKC LSK +M DPVI+ SGQT+++ YI WL + TCP +QVL LTPNHLI E+
Sbjct: 77 EFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPTAKQVLYRVCLTPNHLINEL 135
Query: 143 ISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA---TLPDQTEAAKELRLLT 199
I++WC + + P + + + + +TE D SLL+++S+ ++ DQTEAAKEL L T
Sbjct: 136 ITRWCLANKYDRP-APKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEAAKELALQT 194
Query: 200 KRMPSFRALF-GESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA 258
++ + R F E D+I +LL+PLS E NP LQE+++T L N+S + NK ++A
Sbjct: 195 EKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALFNMSTFEKNKTVLA 254
Query: 259 ETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE-GHQ 317
E VIPLL +++ G++ TR NA L +LS +DSNK +IG S ALK LIDL+ E
Sbjct: 255 ENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSVALKALIDLIGELDDL 314
Query: 318 SAMKDVASAIFNLCITH-ENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAV 376
SA D A+ +LC EN +A+ G +K I ++ E LA LA++S + R +
Sbjct: 315 SATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRNLFESLAALALISPHERVI 374
Query: 377 EEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW--KAMREEESTHGTISK 434
+E+ +LG + +L I+R+++C EN + I+ + R + K + EEE+ H T +K
Sbjct: 375 QEVANLGVIYDLLSILRKTSCMVTCENAVVIVGNMYAKSRERSIKKILAEEENQHKTFTK 434
Query: 435 LAQDGTARAKRKATGILE 452
+A G+ A KA GIL+
Sbjct: 435 IATQGSVVAVMKAQGILQ 452
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 158/392 (40%), Positives = 230/392 (58%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
V P+EF C LS ++M +P+++ASGQTF++ YI WLK RTCPRT+QVL H + PNH
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIPNH 121
Query: 138 LIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSA--TLPDQTEAAKEL 195
LI E+I +WC + P + + + + D + SLL+++S+ ++ DQTEAAKEL
Sbjct: 122 LINEVIKEWCLIHNFDRPKTSDEVID--LFTGDLE---SLLQRISSPSSVEDQTEAAKEL 176
Query: 196 RLLTKRMPSFRALF-GESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK 254
L KR S F + D+I +LL+PLS S E+ NP E+++T L S + NK
Sbjct: 177 ALKAKRFSSVCVYFVAKIPDSITRLLTPLSIS--EDS-NPEFLENIVTALHIFSTSEKNK 233
Query: 255 KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDE 314
LVAE P+V+PLL ++ GT+ TR ++AA + +LS DSNK +IG S LK LI +++E
Sbjct: 234 TLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKALIHVIEE 293
Query: 315 GHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLST-NH 373
G A + SA+ NLC E +AV +G + +KKI G +V LL++LA +ST NH
Sbjct: 294 GDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFVSTQNH 353
Query: 374 RAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRT---------KWKAMRE 424
+ EE+ +LG + + I+R S N EN + I++ IC S + K + E
Sbjct: 354 QTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQNVVLREEKRDVVLE 413
Query: 425 EESTHGTISKLAQDGTARAKRKATGILERLKR 456
EE+ HGT ++L RA A ILE + R
Sbjct: 414 EENKHGTFTRLENQEAGRATSLAKRILEWILR 445
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 152/392 (38%), Positives = 234/392 (59%)
Query: 76 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTP 135
+ ++ PE+F CP+S ELM+DP I+++GQT++R +IQRW+ GN +CP+TQQ L + LTP
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTP 298
Query: 136 NHLIREMISQWCRSQGIELPNSV---QYINEEGI---TEADRDHFLSLLKKMSA-TLPDQ 188
N+++R +ISQWC IE P + N +G D +L+ K+S+ ++ D+
Sbjct: 299 NYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 358
Query: 189 TEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLS 248
A E+R L+KR R L E+ AIP L+ L+ +G + QE+ +T +LNLS
Sbjct: 359 RTAVSEIRSLSKRSTDNRILIAEA-GAIPVLVKLLTS----DG-DTETQENAVTCILNLS 412
Query: 249 IHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPL 308
I+++NK+L+ V +++ LR+G++E R NAAA LF+LS D NK +IG SGA+ L
Sbjct: 413 IYEHNKELIMLAGAVTSIVL-VLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMAL 471
Query: 309 IDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH---VDELLAI 365
+DLL G KD A+A+FNLCI NK RAVR G V ++K + D DE L I
Sbjct: 472 VDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTI 531
Query: 366 LAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREE 425
L++L++N A I + ++ +++ RN+EN AIL +C D K ++
Sbjct: 532 LSVLASNQVAKTAILRANAIPPLIDCLQKDQ-PRNRENAAAILLCLCKRDTEKLISIGRL 590
Query: 426 ESTHGTISKLAQDGTARAKRKATGILERLKRT 457
+ + +L++DGT RAKRKA +LE L+++
Sbjct: 591 GAVV-PLMELSRDGTERAKRKANSLLELLRKS 621
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 136/381 (35%), Positives = 223/381 (58%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P EF CP++ E+M DPVI+A+GQT+++ IQ+W AG++TCP+T+Q L H L PN ++
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALK 350
Query: 141 EMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSAT-LPDQTEAAKELRLLT 199
+I QWC ++P + ++ + E +D L++ +S++ L +Q + K++RLL
Sbjct: 351 NLIMQWCEKNNFKIPE--KEVSPDSQNE-QKDEVSLLVEALSSSQLEEQRRSVKQMRLLA 407
Query: 200 KRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAE 259
+ P R L + AIP L+ LS ++GI QE+ +TTLLNLSI + NKKL++
Sbjct: 408 RENPENRVLIANA-GAIPLLVQLLSYP--DSGI----QENAVTTLLNLSIDEVNKKLISN 460
Query: 260 TPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSA 319
IP +++ L +G E R N+AAALF+LS LD NK IG S + PL+DLL G
Sbjct: 461 EG-AIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRG 519
Query: 320 MKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD---GVHVDELLAILAMLSTNHRAV 376
KD +A+FNL + NK RA+ G V +L + D G+ +DE L+IL +L+++
Sbjct: 520 KKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGM-IDEALSILLLLASHPEGR 578
Query: 377 EEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLA 436
+ IG L + ++ IR+ T +NKE ++L + S+ + + + + + ++
Sbjct: 579 QAIGQLSFIETLVEFIRQGT-PKNKECATSVLLELG-SNNSSFILAALQFGVYEYLVEIT 636
Query: 437 QDGTARAKRKATGILERLKRT 457
GT RA+RKA +++ + ++
Sbjct: 637 TSGTNRAQRKANALIQLISKS 657
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 386 (140.9 bits), Expect = 3.9e-56, Sum P(2) = 3.9e-56
Identities = 102/272 (37%), Positives = 151/272 (55%)
Query: 182 SATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVI 241
S++L Q +A ELRLL K R + G S AI L+ L + QE+ +
Sbjct: 555 SSSLDTQRQATAELRLLAKHNMDNRIVIGNS-GAIVLLVELLYSTDSAT------QENAV 607
Query: 242 TTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK 301
T LLNLSI+DNNKK +A+ + PL+ L +G+ E + N+AA LF+LS ++ NK IG+
Sbjct: 608 TALLNLSINDNNKKAIADAGAIEPLI-HVLENGSSEAKENSAATLFSLSVIEENKIKIGQ 666
Query: 302 SGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVH--V 359
SGA+ PL+DLL G KD A+A+FNL I ENKA V+ G V ++ +MD V
Sbjct: 667 SGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID-LMDPAAGMV 725
Query: 360 DELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW 419
D+ +A+LA L+T IG GG+ ++ ++ + R KEN A L + ++ ++
Sbjct: 726 DKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSA-RGKENAAAALLQLS-TNSGRF 783
Query: 420 KAMREEESTHGTISKLAQDGTARAKRKATGIL 451
M +E + L+Q GT RA+ KA +L
Sbjct: 784 CNMVLQEGAVPPLVALSQSGTPRAREKAQALL 815
Score = 228 (85.3 bits), Expect = 3.9e-56, Sum P(2) = 3.9e-56
Identities = 38/89 (42%), Positives = 63/89 (70%)
Query: 77 TVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPN 136
+V+ +F CPLS E+M DPVI++SGQT+++ +I+RW+ G + CP+T+Q L+HT L PN
Sbjct: 230 SVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPN 289
Query: 137 HLIREMISQWCRSQGIELP--NSVQYINE 163
+ ++ +I+ WC + ++LP N +NE
Sbjct: 290 YTVKALIANWCETNDVKLPDPNKSTSLNE 318
Score = 138 (53.6 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 66/304 (21%), Positives = 130/304 (42%)
Query: 155 PNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHD 214
P++ ++ E AD + + + AT P ++A+ E+R + A + D
Sbjct: 445 PSATSTVSNEEFPRADANE--NSEESAHAT-PYSSDASGEIRSGPLAATTSAATRRDLSD 501
Query: 215 AIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSG 274
P+ + + + + L +++ N + D ++E + L++ L+S
Sbjct: 502 FSPKFMDRRTRGQFWRRPSERLGSRIVSAPSNETRRD-----LSEVETQVKKLVEELKSS 556
Query: 275 TIETRSNAAAALFTLSALD-SNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCIT 333
+++T+ A A L L+ + N+ VIG SGA+ L++LL + ++ +A+ NL I
Sbjct: 557 SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSIN 616
Query: 334 HENKARAVRDGG-VSVILKKIMDGVHV--DELLAILAMLSTNHRAVEEIGDLGGVSCMLR 390
NK +A+ D G + ++ + +G + A L LS +IG G + ++
Sbjct: 617 DNNK-KAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVD 675
Query: 391 IIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGI 450
++ T R K++ L + + K AM + + L D A KA +
Sbjct: 676 LLGNGT-PRGKKDAATALFNLSIHQENK--AMIVQSGAVRYLIDL-MDPAAGMVDKAVAV 731
Query: 451 LERL 454
L L
Sbjct: 732 LANL 735
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 488 (176.8 bits), Expect = 2.9e-46, P = 2.9e-46
Identities = 135/398 (33%), Positives = 211/398 (53%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
++ P++F CP+S +LM DPVI+++GQT+DR I RW++ G+ TCP+T Q+L + + PN
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNR 362
Query: 138 LIREMISQWCRSQGI-------ELPNS--VQYINEEGITEADRDHFLSLLKKMS-ATLPD 187
++ +I QWC + GI + PN + + EA++ L+K ++ +
Sbjct: 363 ALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAA 422
Query: 188 QTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNL 247
QT AA+E+RLL K RA E+ AIP L L+ EN I QE+ +T +LNL
Sbjct: 423 QTVAAREIRLLAKTGKENRAYIAEA-GAIPHLCRLLTS---ENAI---AQENSVTAMLNL 475
Query: 248 SIHDNNKKLVAETPMVIPLLMDALRSG-TIETRSNAAAALFTLSALDSNKEVIG-KSGAL 305
SI++ NK + E + ++ L SG T+E + NAAA LF+LSA+ K+ I +
Sbjct: 476 SIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCV 535
Query: 306 KPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM-DGVHVDELLA 364
+ L LL G KD +A++NL +N +R + GGVS ++ + +GV +E
Sbjct: 536 EALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGV-AEEAAG 594
Query: 365 ILAMLSTNHRAVEEIG-DLGGVSCMLRIIRESTCDRNKENCIAILHTICLSD--RTKWKA 421
LA+L E IG + V+ ++ ++R T R KEN +A L +C S K
Sbjct: 595 ALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGT-PRGKENAVAALLELCRSGGAAVAEKV 653
Query: 422 MREEESTHGTISKLAQDGTARAKRKATGILERLKRTVN 459
+R + G + L GT RA+RKA + +R N
Sbjct: 654 LRAP-AIAGLLQTLLFTGTKRARRKAASLARVFQRREN 690
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 462 (167.7 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 138/447 (30%), Positives = 223/447 (49%)
Query: 25 ATELKKELQKLVRLIVDDVDYRTET-----IDQARDTLCAXXXXXXXXXXXXXXXHETVS 79
+ L E+Q+L I D +D R+++ I R + C H+++S
Sbjct: 213 SASLTDEIQRLEDEIQDQIDDRSKSAAASLIGLVRYSKCVLYGPSTPAPDFRR--HQSLS 270
Query: 80 ---CPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPN 136
P +F+CP++ ELMRDPV++A+GQT+DR I W+++G+ TCP+T QVL HT L PN
Sbjct: 271 DANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPN 330
Query: 137 HLIREMISQWCRSQGI--EL--PNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAA 192
++ +I WCR Q I EL + + E + L++K+S D
Sbjct: 331 RALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVA--DSNGVV 388
Query: 193 KELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDN 252
ELR L K RA E+ AIP+L+ L+ ++C P+LQ + +TT+LNLSI +
Sbjct: 389 FELRALAKSDTVARACIAEA-GAIPKLVRYLA-TEC-----PSLQINAVTTILNLSILEQ 441
Query: 253 NKKLVAETPMVIPLLMDALRSG-TIETRSNAAAALFTLSALDSNKEVIG-KSGALKPLID 310
NK + ET + +++ LRSG T E ++NAAA LF+L+ + + + +G K+ + L+D
Sbjct: 442 NKTRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVD 501
Query: 311 LLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLS 370
L +G S+ +D AI NL EN R V G + + +E +A++ +
Sbjct: 502 LAKQGPTSSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQE--LPEEAVAVVEAVV 559
Query: 371 TNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKA-MREEESTH 429
+ + + ++RE D +E+ A L T+C ++ A M
Sbjct: 560 RRGGLMAVSAAFSLIRLLGEVMREGA-DTTRESAAATLVTMCRKGGSELVAEMAAIPGIE 618
Query: 430 GTISKLAQDGTARAKRKATGILERLKR 456
I ++ GTAR RKA ++ L+R
Sbjct: 619 RVIWEMIGAGTARGGRKAASLMRYLRR 645
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 461 (167.3 bits), Expect = 3.2e-43, P = 3.2e-43
Identities = 131/397 (32%), Positives = 212/397 (53%)
Query: 79 SCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHL 138
S P+EF CP+S +LMRDPV+ ++GQT+DRP I +W++ G+ TCP + Q L+ L PN
Sbjct: 296 SVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRA 355
Query: 139 IREMISQWCRSQGIELPNSVQYINEEGITE--ADRDHFLSLLKKMSAT-------LPDQT 189
+R +ISQWC G++ +S + + EG+ E A + ++ AT L D +
Sbjct: 356 LRSLISQWCGVYGLQY-DSPE--SNEGMAECVAASCSSRAAMEANKATARILVRMLEDGS 412
Query: 190 E-----AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTL 244
E AAKE+RLL K RA + AIP LL L S + QE+ +T L
Sbjct: 413 ENVKAVAAKEIRLLAKTGKQNRAFIADL-GAIP-LLCRLLLSN-----DWMAQENAVTAL 465
Query: 245 LNLSIHDNNKKLVAETPMVIPLLMDALRSG-TIETRSNAAAALFTLSALDSNKEVI-GKS 302
LNLSI + NK + E + L++ L++G T E + NAAA LF+LS + + K++I +
Sbjct: 466 LNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEP 525
Query: 303 GALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDEL 362
GA++ L +L +G KD A+FNL E+ AR + V +++ + + +E
Sbjct: 526 GAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRNDTVSEEA 585
Query: 363 LAILAMLSTNHRAVEEIGDLGGV-SCMLRIIRESTCDRNKENCIAILHTICLSDRTKW-K 420
LA+L V +G V + ++ ++R T + KEN ++ L+ IC + +
Sbjct: 586 AGALALLMKQPSIVHLVGSSETVITSLVGLMRRGT-PKGKENAVSALYEICRRGGSALVQ 644
Query: 421 AMREEESTHGTISKLAQDGTARAKRKATGILERLKRT 457
+ + + I + +GT RAK+KA+ I++ +R+
Sbjct: 645 RVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRS 681
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 410 (149.4 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 107/313 (34%), Positives = 171/313 (54%)
Query: 146 WCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSF 205
W R GI +P +V+ E + + LK S++L Q EA +R+L +
Sbjct: 400 W-RHPGI-IPATVRETGSSSSIETEVKKLIDDLK--SSSLDTQREATARIRILARNSTDN 455
Query: 206 RALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIP 265
R + +AIP L+S L + + +Q D +T LLNLSI+DNNK L+AE+ ++P
Sbjct: 456 RIVIARC-EAIPSLVSLLYST------DERIQADAVTCLLNLSINDNNKSLIAESGAIVP 508
Query: 266 LLMDALRSGTIE-TRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVA 324
L+ L++G +E ++N+AA LF+LS ++ K IG++GA++PL+DLL G S KD A
Sbjct: 509 LI-HVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAA 567
Query: 325 SAIFNLCITHENKARAVRDGGVSVILKKIMDGVH--VDELLAILAMLSTNHRAVEEIGDL 382
+A+FNL I HENK + + G V +++ +MD V++ + +LA L+T IG+
Sbjct: 568 TALFNLSIHHENKTKVIEAGAVRYLVE-LMDPAFGMVEKAVVVLANLATVREGKIAIGEE 626
Query: 383 GGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTAR 442
GG+ ++ ++ + R KEN A L +C + K+ E + L + GTAR
Sbjct: 627 GGIPVLVEVVELGSA-RGKENATAALLQLC-THSPKFCNNVIREGVIPPLVALTKSGTAR 684
Query: 443 AKRKATGILERLK 455
K KA +L+ K
Sbjct: 685 GKEKAQNLLKYFK 697
Score = 325 (119.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 93/355 (26%), Positives = 171/355 (48%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
V P +F+C LS ELM DPVI+ASGQTF+R +IQ+W+ G CP+T+Q LSHT LTPN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 138 LIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQ--TEA--AK 193
++R ++ WC + + P+ ++ I+ + F L++ + A+ + +E+ A+
Sbjct: 298 IVRAFLASWCETNNVYPPDPLELIHSS-------EPFPLLVESVRASSSENGHSESLDAE 350
Query: 194 ELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINP-NLQEDVITT---LLNLSI 249
ELR + R S + E + + ++ P E+ ++ ++
Sbjct: 351 ELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATV 410
Query: 250 HDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDS-NKEVIGKSGALKPL 308
+ ET + L+D L+S +++T+ A A + L+ + N+ VI + A+ L
Sbjct: 411 RETGSSSSIETE--VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSL 468
Query: 309 IDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDEL----LA 364
+ LL + D + + NL I NK+ G + ++ + G +++E A
Sbjct: 469 VSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTG-YLEEAKANSAA 527
Query: 365 ILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILH-TICLSDRTK 418
L LS EIG+ G + ++ ++ + K+ A+ + +I ++TK
Sbjct: 528 TLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTK 582
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 109/336 (32%), Positives = 177/336 (52%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHT-ILTPNHLI 139
P +F+CP+S E+M DPVIL SG TFDR IQ+W+ +GNRTCP T+ LS T L PNH +
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 140 REMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLT 199
R +I + + L S + ++ + + +S L S++ + E+ L LT
Sbjct: 66 RSLILNFAH---VSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLT 122
Query: 200 KRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKK-LVA 258
KR S R ES A+ L C + N LQE ++ LLNLS+ D+NK LVA
Sbjct: 123 KRDSSIRRKVTES-GAVRAALD------CVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVA 175
Query: 259 ETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK-SGALKPLIDLLDEGHQ 317
+ VI ++ LR G+ + ++ AA L +L+ ++ NK IG A+ L+ LL G+
Sbjct: 176 DG--VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGND 233
Query: 318 SAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVE 377
K+ A+A++ LC +N+ R V G V ++++ G+ + + +L +L E
Sbjct: 234 RERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSGL--ERAVEVLGLLVKCRGGRE 291
Query: 378 EIGDLGG-VSCMLRIIRESTCDRNKENCIAILHTIC 412
E+ + G V ++ ++R + + + IL+ +C
Sbjct: 292 EMSKVSGFVEVLVNVLRNGNL-KGIQYSLFILNCLC 326
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 99/293 (33%), Positives = 170/293 (58%)
Query: 172 DHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENG 231
+H +S L S ++ +Q +AA E+RLL+K P R ++ AI L+S +S S +
Sbjct: 65 NHLVSHLDS-SYSIDEQKQAAMEIRLLSKNKPENRIKIAKA-GAIKPLISLISSSDLQ-- 120
Query: 232 INPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSA 291
LQE +T +LNLS+ D NK+ +A + + PL+ AL+ GT + NAA AL LS
Sbjct: 121 ----LQEYGVTAILNLSLCDENKESIASSGAIKPLVR-ALKMGTPTAKENAACALLRLSQ 175
Query: 292 LDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILK 351
++ NK IG+SGA+ L++LL+ G A KD ++A+++LC ENK RAV+ G + +++
Sbjct: 176 IEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVE 235
Query: 352 KIMD-GVH-VDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILH 409
+ D G + VD+ ++++L + + I + GGV ++ I+ T R KE ++IL
Sbjct: 236 LMADFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGT-QRQKEMAVSILL 294
Query: 410 TICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRTVNLTH 462
+C + ++ M E + L+Q GT+RAK+KA ++E L++ ++++
Sbjct: 295 QLC-EESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISN 346
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 95/278 (34%), Positives = 160/278 (57%)
Query: 182 SATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVI 241
S+++ +Q +AA E+RLL+K P R ++ AI L+S +S S + LQE +
Sbjct: 72 SSSIEEQKQAAMEIRLLSKNKPENRIKLAKA-GAIKPLVSLISSSDLQ------LQEYGV 124
Query: 242 TTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK 301
T +LNLS+ D NK+++ + V PL+ +ALR GT T+ NAA AL LS ++ NK IG+
Sbjct: 125 TAVLNLSLCDENKEMIVSSGAVKPLV-NALRLGTPTTKENAACALLRLSQVEENKITIGR 183
Query: 302 SGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD--GVHV 359
SGA+ L++LL+ G A KD ++A+++LC T+ENK RAV G + +++ ++D V
Sbjct: 184 SGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMV 243
Query: 360 DELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW 419
D+ ++ +L + + + + GGV ++ I+ T R KE ++IL +C + +
Sbjct: 244 DKSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAGT-QRQKEISVSILLQLC-EESVVY 301
Query: 420 KAMREEESTHGTISKLAQDGTAR-AKRKATGILERLKR 456
+ M E + L+Q +R AK KA ++E L++
Sbjct: 302 RTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQ 339
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 281 (104.0 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 67/220 (30%), Positives = 117/220 (53%)
Query: 236 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 295
+Q + +++NLS+ NK + + V PLL+D L+SGT E + + A ALF+L+ D N
Sbjct: 292 VQTNAAASVVNLSLEKQNKVKIVRSGFV-PLLIDVLKSGTTEAQEHVAGALFSLALEDEN 350
Query: 296 KEVIGKSGALKPLIDLLDEGH-QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM 354
K VIG GA++PL+ L + A +D A A+++L + N+ R VR G V +L +
Sbjct: 351 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVR 410
Query: 355 DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRE---STCDRNKENCIAILHTI 411
G +L +L L+ + D V+ ++ +RE + +ENC+A+L T+
Sbjct: 411 SGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTL 470
Query: 412 CLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGIL 451
C + +++ + E + ++ ++G R K KA+ IL
Sbjct: 471 CQGN-LRFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 131 (51.2 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 34/100 (34%), Positives = 50/100 (50%)
Query: 75 HETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGN--RTCPRTQQVLSHTI 132
H+ P EF CP++ LM DPV+++SGQTF+R +Q G T+ LS T+
Sbjct: 26 HKHDETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLS-TV 84
Query: 133 LTPNHLIREMISQWCRSQGIELPNSVQYINEEGITEADRD 172
+ PN ++ I WC Q ++ P EG+ A D
Sbjct: 85 I-PNLAMKSTIFSWCDRQKVDHPRPPDAAYVEGVVRARMD 123
Score = 114 (45.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 40/137 (29%), Positives = 64/137 (46%)
Query: 260 TPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSA 319
T ++ L L S ++NAAA++ LS NK I +SG + LID+L G A
Sbjct: 274 TDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEA 333
Query: 320 MKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDG----VHVDELLAI--LAMLSTNH 373
+ VA A+F+L + ENK G V +L + D LA+ L+++ +N
Sbjct: 334 QEHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNR 393
Query: 374 RAVEEIGDLGGVSCMLR 390
+ G + + M+R
Sbjct: 394 TRLVRAGAVPTLLSMVR 410
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 237 (88.5 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 38/76 (50%), Positives = 56/76 (73%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
PEE +CP+S +LM DPVI+ASGQT++R I++W G+ TCP+TQQ L H LTPN+ ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 141 EMISQWCRSQGIELPN 156
+I+ WC G ++P+
Sbjct: 333 GLIASWCEQNGTQIPS 348
Score = 177 (67.4 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 70/291 (24%), Positives = 134/291 (46%)
Query: 166 ITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSE 225
+ E +D L++L + L + + +++RLL K R G ++ + LL L
Sbjct: 421 VLERYQD-LLAVLNEEEG-LEKKCKVVEKIRLLLKDDEEARIFMG-ANGFVEALLRFLGS 477
Query: 226 SKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAA 285
+ +N N Q+ L NL++++N K + T VI LL + S E+ +A A
Sbjct: 478 AVDDN--NAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSA--ESHGSATAL 533
Query: 286 LFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMK-DVASAIFNLCITHENKARAVRDG 344
LS LD K VIG S A+ L+ LL + ++ K D A++NL T+ A+
Sbjct: 534 YLNLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLS-TYSPNIPALLSS 592
Query: 345 GVSVILKKIM----DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRN 400
+ L+ ++ + + +++ LA+L L+++ +E G+ L + +
Sbjct: 593 NIIKSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE 652
Query: 401 KENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGIL 451
+E ++ L +C + R M +E ++ ++ +GT R + K+ +L
Sbjct: 653 QEQAVSCLLILC-NGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLL 702
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 344 (126.2 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 104/303 (34%), Positives = 160/303 (52%)
Query: 157 SVQYINEEGITEADRDHFLSLLKKM-SATLPDQTEAAKELRLLTKRMPSFRALFGESHDA 215
SV +++ G H + L++ + S + +T AA E+R LT R G A
Sbjct: 459 SVHDLDDSGTMTTS--HTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRC-GA 515
Query: 216 IPQLLSPL-SESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSG 274
I LLS L SE K QE +T LLNLSI + NK ++ E + PL+ L +G
Sbjct: 516 ITPLLSLLYSEEKLT-------QEHAVTALLNLSISELNKAMIVEVGAIEPLV-HVLNTG 567
Query: 275 TIETRSNAAAALFTLSALDSNKEVIGKSGA-LKPLIDLLDEGHQSAMKDVASAIFNLCIT 333
+ N+AA+LF+LS L N+E IG+S A ++ L++LL +G KD ASA+FNL IT
Sbjct: 568 NDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSIT 627
Query: 334 HENKARAVRDGGVSVILKKIMDGVH-VDELLAILAMLSTNHRAVEEIGDLGGVSCMLRII 392
H+NKAR V+ V +++ + + VD+ +A+LA LS + I GG+ ++ +
Sbjct: 628 HDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETV 687
Query: 393 RESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILE 452
+ R KEN ++L +CL+ K+ + +E + L+Q GT RAK KA +L
Sbjct: 688 -DLGSQRGKENAASVLLQLCLNS-PKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLS 745
Query: 453 RLK 455
+
Sbjct: 746 HFR 748
Score = 295 (108.9 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 110/401 (27%), Positives = 179/401 (44%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
+S P F+CPLS ELM DPVI+ASGQTFDR I++WL G CPRT+QVL+H L PN+
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 138 LIREMISQWCRSQGIELP-NSV-QY--------INEEGITEADR-DHFLSLLKKMSATLP 186
++ MI+ W + I L NS QY N G + +R + F L+ S T
Sbjct: 296 TVKAMIASWLEANRINLATNSCHQYDGGDASSMANNMGSQDFNRTESFRFSLRSSSLTSR 355
Query: 187 DQTEAAKELRLLTKRMPSFRALFGESHDA---IPQLLSP---LSESKCENGINPNLQEDV 240
E L + + +L GES I +LLSP + S+ E+ + D
Sbjct: 356 SSLETGNGFEKLKINVSA--SLCGESQSKDLEIFELLSPGQSYTHSRSESVCSVVSSVDY 413
Query: 241 ITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALD-SNKEVI 299
+ ++ H+ L L S ++AA + S D + +
Sbjct: 414 VPSVT----HETESILGNHQSSSEMSPKKNLESSNNVNHEHSAAKTYECSVHDLDDSGTM 469
Query: 300 GKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITH-ENKARAVRDGGVSVILKKIMDGVH 358
S +K L++ L G A+ I +L I EN+ R G ++ +L +
Sbjct: 470 TTSHTIK-LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEK 528
Query: 359 VDELLAILAMLSTNHRAVEE--IGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDR 416
+ + A+ A+L+ + + + I ++G + ++ ++ DR KEN A L ++ +
Sbjct: 529 LTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGN-DRAKENSAASLFSLSVLQV 587
Query: 417 TKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRT 457
+ + + + ++ L + GT R K+ A L L T
Sbjct: 588 NRERIGQSNAAIQALVNLLGK-GTFRGKKDAASALFNLSIT 627
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 115/403 (28%), Positives = 186/403 (46%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
+ P F+CP+S +LM DPV +++GQT+DR I W+ GN TCP T+ LS L PNH
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 138 LIREMISQWC---RSQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSA------TLPD 187
+R +I +WC RS G+E +P Q AD SLL + SA ++
Sbjct: 72 TLRRLIQEWCVANRSNGVERIPTPKQ--------PADPISVRSLLSQASAITGTHVSVRS 123
Query: 188 QTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNL 247
+ A + LR L + R L H+A L+ L ++ L + + L+ L
Sbjct: 124 RAAAIRRLRGLARDSEKNRVLIA-GHNAREILVRILFADIETTSLSSELVSESLALLVLL 182
Query: 248 SIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAAL-FTLS---ALDSNKEVIGKSG 303
+ + + VA P + + L +IE R NAAA + L+ ++D + G
Sbjct: 183 HMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDS 242
Query: 304 ALKPLIDLLDEGHQS--AMKDVASAIFNLCITHENKARAVRDGGVSVILKKI---MDGVH 358
+ ++DLL S A+K AIF LC+ + + A+ G +++ ++ D
Sbjct: 243 IFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCD 302
Query: 359 VDELLAILAMLSTNHRAVEEIGDLG-GVSCMLR-IIRESTCDRNKENCIAILHTICLSDR 416
+ LA + +L G+ V M++ I+R S DR E L +C ++
Sbjct: 303 TERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVS--DRATEYAAGALLALCTAE- 359
Query: 417 TKWKAMREEESTHGTISKLA----QDGTARAKRKATGILERLK 455
+ R+E + G +++L D T RAKRKA +L+ L+
Sbjct: 360 ---ERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLR 399
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 257 (95.5 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 65/227 (28%), Positives = 122/227 (53%)
Query: 236 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 295
+Q + +++NLS+ NK + + V PLL+D L+SG+ E + + ALF+L+ + N
Sbjct: 241 VQTNAAASIVNLSLEKPNKLKIVRSGFV-PLLIDVLKSGSTEAQEHVIGALFSLAVEEEN 299
Query: 296 KEVIGKSGALKPLIDLLDEGH-QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM 354
K VIG GA++PL+ L + A +D A A+++L + N++R V+ G V ++L I
Sbjct: 300 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIR 359
Query: 355 DGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRN----KENCIAILHT 410
G +L +L L+ + D VS ++ +RES + +ENC+ L T
Sbjct: 360 SGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLT 419
Query: 411 ICLSDRTKWKAMREEESTHGTISKL--AQDGTARAKRKATGILERLK 455
+ + + +++ + E ++++ ++ G+ R K KA+ IL+ L+
Sbjct: 420 LSVGNM-RFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTLR 465
Score = 143 (55.4 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 36/94 (38%), Positives = 49/94 (52%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQ--RWLKAGNRTCPRTQQVLSHTILTPNHL 138
P EF CP++ LM DPV++ASGQTF+R +Q R L + TQ LS T++ PN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLS-TVI-PNLA 68
Query: 139 IREMISQWCRSQGIELPNSVQYINEEGITEADRD 172
++ I WC +E P Y EG+ D
Sbjct: 69 MKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMD 102
Score = 130 (50.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 56/195 (28%), Positives = 88/195 (45%)
Query: 260 TPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSA 319
T ++ LL + S ++NAAA++ LS NK I +SG + LID+L G A
Sbjct: 223 TDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEA 282
Query: 320 MKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDG----VHVDELLAILAM-LSTNHR 374
+ V A+F+L + ENK G V +L + D LA+ + L N+R
Sbjct: 283 QEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNR 342
Query: 375 AVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTIC-LSDRTKWK-AMREEESTHGTI 432
+ + G V ML +IR E+ IL +C L+ ++ K AM + + +
Sbjct: 343 S--RLVKAGAVPMMLSMIRSG------ESASRILLLLCNLAACSEGKGAMLDGNAVSILV 394
Query: 433 SKLAQDGTARAKRKA 447
KL + G A + A
Sbjct: 395 GKLRESGGAESDAAA 409
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 340 (124.7 bits), Expect = 4.7e-30, P = 4.7e-30
Identities = 107/393 (27%), Positives = 198/393 (50%)
Query: 82 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIRE 141
++ +CP+S E+M DPV+L SG T+DR I +W +GN TCP+T + L T+L N +++
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 142 MISQWCRSQGIEL----PNSVQYINEEGITEADR--DHFLSLLKKMSATLPDQTEAAKEL 195
+I + + G+ + V EA + FL+ + + + +A E+
Sbjct: 340 VIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAG-ELIKGDEEEMVKALVEI 398
Query: 196 RLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNK- 254
R+LTK +R+ E+ + L+ L +P +QE+ + ++NLS K
Sbjct: 399 RILTKTSTFYRSCLVEA-GVVESLMKILRSD------DPRIQENAMAGIMNLSKDIAGKT 451
Query: 255 KLVAETPMVIPLLMDALRSGTI-ETRSNAAAALFTLSALDSNKEVIGK-SGALKPLIDLL 312
++V E + L+++ L G E+R AAAALF LS+L +IG+ S A+ L+ ++
Sbjct: 452 RIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIV 511
Query: 313 ---DEGHQSAMKDVASAIFNLCITH-ENKARAVRDGGVSVIL-----KKIMDGVHVDELL 363
D G SA ++ AI +L + +N R + G V V+L ++I DGV D +
Sbjct: 512 KSCDYG-DSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSM- 569
Query: 364 AILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCD-RNKENCIAILHTICLSDRTKWK-A 421
AILA ++ + + GG+ ++I+ S K++C+A+L +C + + +
Sbjct: 570 AILAKMAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGS 629
Query: 422 MREEESTHGTISKLAQDGTARAKRKATGILERL 454
+ + S G++ + +G +KA+ +++ +
Sbjct: 630 LAKNPSIMGSLYTASSNGELGGGKKASALIKMI 662
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 95/278 (34%), Positives = 147/278 (52%)
Query: 182 SATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVI 241
S+++ + AA +LRLL K R L GES AI Q L PL +C + P QE +
Sbjct: 194 SSSVAIKRSAAAKLRLLAKNRADNRVLIGES-GAI-QALIPLL--RCND---PWTQEHAV 246
Query: 242 TTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK 301
T LLNLS+HD NK ++A + L+ L++GT ++ NAA AL +L+ L+ NK IG
Sbjct: 247 TALLNLSLHDQNKAVIAAGGAIKSLVW-VLKTGTETSKQNAACALLSLALLEENKGSIGA 305
Query: 302 SGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD-GVHVD 360
GA+ PL+ LL G KD + ++ LC +NK RAV G V ++ + + G +
Sbjct: 306 CGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMA 365
Query: 361 E-LLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKW 419
E + +L+ L+ E I + GG++ ++ I + + + KE I L +C SD +
Sbjct: 366 EKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSV-KGKEFAILTLLQLC-SDSVRN 423
Query: 420 KAMREEESTHGTISKLAQDGTA--RAKRKATGILERLK 455
+ + E + L+Q G+ RAKRKA +L L+
Sbjct: 424 RGLLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLR 461
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 52/196 (26%), Positives = 98/196 (50%)
Query: 264 IPLLMDALRSGTIETRSNAAAALFTLSALDS-NKEVIGKSGALKPLIDLLDEGHQSAMKD 322
+ L +D LRS ++ + +AAA L L+ + N+ +IG+SGA++ LI LL +
Sbjct: 185 VKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEH 244
Query: 323 VASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEE---- 378
+A+ NL + +NKA G + ++ + G + A A+LS +EE
Sbjct: 245 AVTALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSL--ALLEENKGS 302
Query: 379 IGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQD 438
IG G + ++ ++ +C R K++ + L+ +C + K +A+ + + +A++
Sbjct: 303 IGACGAIPPLVSLLLNGSC-RGKKDALTTLYKLCTLQQNKERAVTAG-AVKPLVDLVAEE 360
Query: 439 GTARAKRKATGILERL 454
GT A+ KA +L L
Sbjct: 361 GTGMAE-KAMVVLSSL 375
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 109/400 (27%), Positives = 183/400 (45%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRT-CPRTQQVLSHTILTPN 136
+ P F+CP+S ELM+DPV + +GQT+DR I+ W+ GN T CP T+ LS L PN
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 137 HLIREMISQWC---RSQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAA 192
H +R +I +WC RS G+E +P Q + + S + ++ + A
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQ--ASAITGTHVSVRSRAAAL 129
Query: 193 KELRLLTKRMPSFRALFGESHDAIPQLLSPL-SESKCENGINPNLQEDVITTLLNLSIHD 251
+ LR + R L +H+A L+ L SE+ + L + + L+ L I +
Sbjct: 130 RRLRGFARDSDKNRVLIA-AHNATEILIKILFSETT-----SSELVSESLALLVMLPITE 183
Query: 252 NNKKL-VAETPMVIPLLMDALRSGTIETRSNAAAALFTLS----ALDSNKEVIGKSGALK 306
N+ + ++ P + L L +IETR NAAA + +S + D + +
Sbjct: 184 PNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFE 243
Query: 307 PLIDLLDEGHQS--AMKDVASAIFNLCITHENKARAVRDGGVSVILKKI---MDGVHVDE 361
++DLL S A+K +F LC + A+ G +++ ++ D +
Sbjct: 244 GVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 303
Query: 362 LLAILAMLSTNHRAVEEIGDLG-GVSCMLR-IIRESTCDRNKENCIAILHTICLSDRTKW 419
LA + +L G+ V +++ I+R S DR E L +C ++ +W
Sbjct: 304 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVS--DRATEYAAGALLALCTAEE-RW 360
Query: 420 KAMREEESTHGTISKLA----QDGTARAKRKATGILERLK 455
REE + G + +L + T RAK+KA +L+ L+
Sbjct: 361 ---REEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLR 397
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 316 (116.3 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 104/394 (26%), Positives = 198/394 (50%)
Query: 82 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIRE 141
E+ CP+S E+M DPV++ +G T+DR I +W +GN TCP T ++L+ T L N +R+
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQ 349
Query: 142 MISQWCRSQGIELP--NSVQYINEEGITE--ADRDHFLSLLKKMSATLPDQTE-----AA 192
+I + C++ GI L + + +++ + E A + + K +++ L + E A
Sbjct: 350 VIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAV 409
Query: 193 KELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDN 252
+E+R+ TK R+ ++ A+ LL LS ++ +QE+ + +LNLS H
Sbjct: 410 REIRVQTKTSSFNRSCLVKA-GAVTPLLKLLSS------VDIRIQENAMAGILNLSKHVT 462
Query: 253 NKKLVAETPMVIPLLMDALRSGT-IETRSNAAAALFTLSALDSNKEVIGKS-GALKPLID 310
K +A + I L++ L G ETR +A+ALF LS+++ +IG++ A+ L++
Sbjct: 463 GKSKIAGEGLKI--LVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMN 520
Query: 311 LL--DEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILK-----KIMDGVHVDELL 363
++ D+ SA + A+ L + +N R + G V ++L +I G+ D L
Sbjct: 521 IVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTAD-CL 579
Query: 364 AILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCD--RNKENCIAILHTICLSD-RTKWK 420
A LA L+ + GG+ ++I+ S K++C+ ++ +CL+ R
Sbjct: 580 ATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVG 639
Query: 421 AMREEESTHGTISKLAQDGTARAKRKATGILERL 454
+ + G++ + +G +KA+ ++ +
Sbjct: 640 VLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMI 673
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 284 (105.0 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 83/291 (28%), Positives = 146/291 (50%)
Query: 76 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNR-TCPRTQQVLSHTILT 134
E + P F CP+S E+M+DPVI+++G T+DR I++WL AG + +CP T+Q ++ LT
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 135 PNHLIREMISQWCR---SQGIE-LPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTE 190
PNH +R +I WC S G+E +P I + I + RD +++ +Q +
Sbjct: 68 PNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDS--------ASSHENQVK 119
Query: 191 AAKELR-LLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSI 249
K LR ++++ + R L E+ +P+ L+ + + ENG +L ++ + L +L
Sbjct: 120 CLKRLRQIVSENATNKRCL--EAA-GVPEFLANIVSNDSENG---SLTDEALNLLYHLET 173
Query: 250 HDNNKKLVAETPM---VIPLLMDALRSGTIETRSNAAAALFT-LSALDSNKEVIGKSGAL 305
+ K + ++ L ++ G E+R A L L D + + K
Sbjct: 174 SETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVF 233
Query: 306 KPLIDLLDEG-HQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 355
++ +LD+ Q A K + N+C N+ +AV G +SVI++ +MD
Sbjct: 234 TEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMD 284
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 286 (105.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 64/225 (28%), Positives = 124/225 (55%)
Query: 236 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 295
+Q +V L+NLS+ +NK + + +V PL+ D L+ G++E + ++A +F+L+ D N
Sbjct: 286 VQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLI-DVLKCGSVEAQEHSAGVIFSLALEDEN 344
Query: 296 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 355
K IG G L+PL+ L+ G + D A A+++L + N+ + V+ G V ++L +
Sbjct: 345 KTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSL 404
Query: 356 GVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRES--TCDRNKENCIAILHTICL 413
G + +L IL +++ + + D GGV CM+ ++R + +E+C+A+L+ +
Sbjct: 405 GQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSH 464
Query: 414 SDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRTV 458
++K + + + K+ + G RAK+KA +LE L+ +
Sbjct: 465 DGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVLRAKI 509
Score = 184 (69.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 81/361 (22%), Positives = 153/361 (42%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P EF CP+S LM DP+I++SG +++R + G P S T++ PN ++
Sbjct: 59 PAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPD--FS-TVI-PNLALK 114
Query: 141 EMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTK 200
I WC + P + E + L+L++K + KEL +
Sbjct: 115 SAIHSWCERRCFPPPKPLNSAAAEKL-------ILALMEKKPQRRKVSV-SEKELIQAIR 166
Query: 201 RMPSFRALFGESH-DAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAE 259
PS R + D P + S+ + + LQ +TT + ++ ++ +
Sbjct: 167 DKPSVRLNHAATELDRRPNYFNSSSDESIASS-SRTLQ---LTTKPSCFSSPSSGEIESL 222
Query: 260 TPMVIP---LLMDALRSGTIETRSNAAAALFTLSALDSNKEV-IGKSGALKPLIDLLDEG 315
P + P L+ L+S I A ++ ++ +D + + + + + L L+
Sbjct: 223 EPNLTPEEEALLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSR 282
Query: 316 HQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDG-VHVDELLA-ILAMLSTNH 373
+ + +V + + NL + NK + VR G V ++ + G V E A ++ L+
Sbjct: 283 YATVQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALED 342
Query: 374 RAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILH-TICLSDRTKWKAMREEESTHGTI 432
IG LGG+ +L +IR T ++ +A+ H ++ S+R K + + G +
Sbjct: 343 ENKTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMV 402
Query: 433 S 433
S
Sbjct: 403 S 403
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 235 (87.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 38/75 (50%), Positives = 55/75 (73%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
PEE +CP+S +LM DPVI+ASGQT++R I++W G+ +CP+TQQ L H LTPN+ ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 141 EMISQWCRSQGIELP 155
+I+ WC GI +P
Sbjct: 336 GLIASWCEQNGITVP 350
Score = 175 (66.7 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 78/348 (22%), Positives = 152/348 (43%)
Query: 113 W-LKAGNRTCPRTQQVLSHTILTPNHL----IREMISQWCRSQGIELPNSVQYINEE-GI 166
W L + P ++ V S + TP + + E + Q E N+ ++ E +
Sbjct: 362 WRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINV 421
Query: 167 TEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSES 226
E +D L+++ K L + + + +R+L K R L G ++ + L L +
Sbjct: 422 LEGYQD-ILAIVDK-EEDLAKKCKVVENVRILLKDNEEARILMG-ANGFVEAFLQFLESA 478
Query: 227 KCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAAL 286
+N N QE L NL++++N K + T VIPLL + +++ A A
Sbjct: 479 VHDN--NAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCS--QSQGPATALY 534
Query: 287 FTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMK-DVASAIFNLCITHENKARAVRDGG 345
LS L+ K VIG S A+ ++LL + ++ K D A++NL N +
Sbjct: 535 LNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNI 594
Query: 346 VSVILKKIMDGVH--VDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKEN 403
+ + G H +++ LA+L L+++ EE+ G+ L + ++ +E
Sbjct: 595 IKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQ 654
Query: 404 CIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGIL 451
++ L +C + + + +E +S ++ +G+ R + K+ +L
Sbjct: 655 AVSCLVILCTGSESCIQMVLQEGVIPSLVS-ISVNGSPRGRDKSQKLL 701
Score = 93 (37.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 54/254 (21%), Positives = 106/254 (41%)
Query: 162 NEEGITEADRDHFL-SLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLL 220
NEE + F+ + L+ + + + D AA+E T M F + + L
Sbjct: 455 NEEARILMGANGFVEAFLQFLESAVHDNNAAAQE----TGAMALFNLAVNNNRNKELMLT 510
Query: 221 SPLSESKCENGINPNLQEDVITTL-LNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETR 279
S + E I+ + + T L LNLS + K ++ + V + L+ + +
Sbjct: 511 SGVIPL-LEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCK 569
Query: 280 SNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKAR 339
+A AL+ LS N + S +K L L G+ ++ + + NL + E K
Sbjct: 570 LDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEE 629
Query: 340 AVRDGGVSVILKKIMD-G--VHVDELLAILAMLSTNHRA-VEEIGDLGGVSCMLRI-IRE 394
+ G+ L ++D G V ++ ++ L +L T + ++ + G + ++ I +
Sbjct: 630 MITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNG 689
Query: 395 STCDRNKENCIAIL 408
S R+K + +L
Sbjct: 690 SPRGRDKSQKLLML 703
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 223 (83.6 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 58/176 (32%), Positives = 92/176 (52%)
Query: 76 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNR-TCPRTQQVLSHTILT 134
+ + P F CP+S ++M+DPVI+++G T+DR I++WL +G + +CP T+QV++ T LT
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 135 PNHLIREMISQWCR---SQGIE-LPNSVQYIN----EEGITEADRDHF--LSLLKKMSAT 184
PNH +R +I WC S GIE +P I E+ I E+ H + LK++
Sbjct: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQI 122
Query: 185 LPDQTEAAKELRLLTKRMPSFRA-LFGESHDAIPQLLSPLSESKCENGINPNLQED 239
+ + T + L +P F A + S D S LS S + N+ E+
Sbjct: 123 VSENTTNKRCLE--AAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLEN 176
Score = 72 (30.4 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 27/132 (20%), Positives = 57/132 (43%)
Query: 235 NLQEDVITTLLNLSIHDNNKKLVAETPM---VIPLLMDALRSGTIETRSNAAAALFTL-S 290
+L ++ ++ L +L + K + ++ L ++ G E+R+ AA L L
Sbjct: 183 SLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLE 242
Query: 291 ALDSNKEVIGKSGALKPLIDLL-DEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVI 349
D + ++ + +I +L D+ A + + C N+ +AV G +S+I
Sbjct: 243 VADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMI 302
Query: 350 LKKIMDGVHVDE 361
++ +MD E
Sbjct: 303 IELLMDDTFSSE 314
Score = 49 (22.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 361 ELLAILAMLSTN-HRAVEEIGDLGGVSCMLRIIRESTCD---RNKENCIAILHTIC 412
++L I N H+AVE G G +S ++ ++ + T RN E + +L +C
Sbjct: 278 QILVITCPWGRNRHKAVE--G--GTISMIIELLMDDTFSSERRNSEMAMVVLDMLC 329
>UNIPROTKB|Q6K762 [details] [associations]
symbol:PUB73 "U-box domain-containing protein 73"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 UniPathway:UPA00143 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208 EMBL:CM000139
GO:GO:0000151 EMBL:AP004864 EMBL:AK106789 RefSeq:NP_001046869.1
UniGene:Os.54797 ProteinModelPortal:Q6K762 PRIDE:Q6K762
EnsemblPlants:LOC_Os02g28870.1 GeneID:4329384
KEGG:dosa:Os02t0490000-01 KEGG:osa:4329384 Gramene:Q6K762
eggNOG:NOG240446 OMA:HLLRDMI ProtClustDB:CLSN2692738 Uniprot:Q6K762
Length = 586
Score = 250 (93.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 96/382 (25%), Positives = 176/382 (46%)
Query: 88 LSKELMRDPVILASGQTFDRPYI--QRWLKAGNRTCPRTQQVLSHTILTPNHLIREMISQ 145
L E+MRDPVIL SG + D+ Y Q+ T T L +++ PNHL+R+MIS
Sbjct: 191 LQAEVMRDPVILPSGYSVDQTYQNNQKRQNPWTNTSTFTDHSLPYSLSVPNHLLRDMISA 250
Query: 146 WCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSF 205
WC P++ + ++ + +LK S Q EA K ++LLTK
Sbjct: 251 WCLDHSDLSPSTTSDTPSTPLEPSEEEQIQRILKLFSGNSASQREALKLIQLLTKTTKGV 310
Query: 206 RALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA-ETPMVI 264
+ + D IP L++ K ++ +L+E+ +T +LNL++H N++++A + +
Sbjct: 311 QPCLAKYADIIPVLIN--LRRKYKSSWTQDLEEERLTIILNLTMHRQNREILAGQNELAG 368
Query: 265 PLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGK----SGALKPLIDLLDEGHQSAM 320
+ ++G R+++ A + ++ A+ S ++ K +G +K L +L +
Sbjct: 369 AIKKIVKKAGNRGKRTSSLAKVASIVAVLSEFDMFRKRMLDAGGMKMLRGMLKIKDTEVI 428
Query: 321 KDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIG 380
+ A+AI L E + A R V +L + + D +L +L L + R +I
Sbjct: 429 TEAATAILALYADGEGEQPA-RFHEVPQMLLECH--MFTDGILLLLDRLPKSPRVFRKIC 485
Query: 381 D--LGGVSCMLRIIRESTCDRNKE-NCIAILHTICLSDRTKWKAMREEESTHGTISKLAQ 437
D L V+ ++ R + I++++ I D K A++ E I +L Q
Sbjct: 486 DQALQLVNIVMAEDASGPVTRKGILSAISLIYEIVERDVGKMNAVKNMEDF---IERLRQ 542
Query: 438 DGTARAKRKATGILERLKRTVN 459
+ R + +ER+ RT++
Sbjct: 543 LSSDRLPMQKMLQVERIIRTLS 564
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 252 (93.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 77/253 (30%), Positives = 124/253 (49%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
PEE +CP+S +LM DPVI+ASGQT++R I++W G+ TCP+T Q LSH LTPN+ ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 141 EMISQWCRSQGIELPNSVQYINEEGITEA-DRDHFLSLLKKMSATLPDQTEAAKELRLLT 199
+IS WC G+++P +G E+ D +++ L +T T +AK R+ +
Sbjct: 340 ALISSWCEQNGVQVP--------DGPPESLDLNYWRLALSVSEST---DTRSAK--RVGS 386
Query: 200 KRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAE 259
++ + + E I + ES+ + L E L L+ D +K
Sbjct: 387 CKLKDVKVVPLEESGTIKE---EACESEYQED-QVTLVERCTELLTTLTDVDTLRKKCRV 442
Query: 260 TPMVIPLLMDALRSGTIETRSNAAAAL--FTLSALDSNKEVIGKSGALKPLIDLLDEGHQ 317
+ LL D + + + AL F SAL+ N K GA+ L +L + ++
Sbjct: 443 VEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMA-LFNLAVDNNR 501
Query: 318 SAMKDVASAIFNL 330
+ +AS I L
Sbjct: 502 NKELMLASGIIPL 514
Score = 149 (57.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 74/307 (24%), Positives = 136/307 (44%)
Query: 163 EEGITEADR-DHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLS 221
E+ +T +R L+ L + TL + +++R+L K R L GE+ + LL
Sbjct: 414 EDQVTLVERCTELLTTLTDVD-TLRKKCRVVEQIRVLLKDDEEARILMGEN-GCVEALLQ 471
Query: 222 PLSESKCENGINPNLQEDVITTLLNLSIHDN-NKKLVAETPMVIPLLMDALRSGTIETRS 280
L + EN N + Q+ L NL++ +N NK+L+ + +IPLL + L + +
Sbjct: 472 FLGSALNEN--NASAQKVGAMALFNLAVDNNRNKELMLASG-IIPLLEEMLCNP--HSHG 526
Query: 281 NAAAALFTLSALDSNKEVIGKSGALKPLIDLL-DEGHQSAMKDVASAIFNLCITHENKAR 339
+ A LS L+ K VIG S A+ +++LL E D ++F+L N
Sbjct: 527 SVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPC 586
Query: 340 AVRDGGVSVILK-KIMDGVH-VDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTC 397
+ V+ + I D ++ LA+L L N +E+ + L I ++
Sbjct: 587 LLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGE 646
Query: 398 DRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLK-- 455
+E +++L +C + + +E +S ++ +GT R + +A +L +
Sbjct: 647 PNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVS-ISVNGTQRGRERAQKLLTLFREL 705
Query: 456 RTVNLTH 462
R + TH
Sbjct: 706 RQRDQTH 712
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 247 (92.0 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 88/356 (24%), Positives = 157/356 (44%)
Query: 118 NRTCPRTQQVL-SHTILTPNHLIREMI----SQWCRSQGIELPNSVQYINEEGITEADRD 172
N T + V+ +H+ TP L S S IE + + T + D
Sbjct: 167 NSTTSSDESVIVAHSPFTPLPLTTRPACFSPSPSSSSSEIETLTHHTFFSNSTSTATEED 226
Query: 173 HFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGI 232
+ K S+ + DQ + +R +T+ R P++LS L
Sbjct: 227 EVI-YNKLKSSEIFDQEQGLIMMRKMTRTNDEARVSL-----CSPRILSLLKNMIVSR-- 278
Query: 233 NPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSAL 292
+Q + + +L+NLS+ NK + V P+L+D L+SG+ E + +AA +F+LS
Sbjct: 279 YSLVQTNALASLVNLSLDKKNKLTIVRLGFV-PILIDVLKSGSREAQEHAAGTIFSLSLE 337
Query: 293 DSNKEVIGKSGALKPLIDLLDEGHQSAMK-DVASAIFNLCITHENKARAVRDGGVSVILK 351
D NK IG GAL+PL+ L + D A A+++L + N+++ VR G V +
Sbjct: 338 DDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFS 397
Query: 352 KIMDGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCD-----RN----KE 402
+ G L ++ L+ + D V+ ++ +RE + R+ +E
Sbjct: 398 MVRSGESASRALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARE 457
Query: 403 NCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRTV 458
NC+A L + + ++K + +E + ++ + GT RA+ KA IL+ ++ V
Sbjct: 458 NCVAALFALS-HESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQLMRERV 512
Score = 179 (68.1 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 81/358 (22%), Positives = 152/358 (42%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQ--RWLKAGNRTCPRTQQVLSHTILTPNHL 138
P EF CP+SK +M DPV+++SGQTF+R +Q R L + + + + + PN
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLNDDEESLPDFSNIIPNLN 93
Query: 139 IREMISQWCRSQGIELPNSVQYINEEGITEA-----DRDHFLS---LLKKMSATLPDQTE 190
++ I WC + G+ P Y E I D + +S LL+ ++ P
Sbjct: 94 MKSTIDTWCDTVGVSRPQPPDYSTVERILRQQMPPPDVEIRVSEQELLRAVAHRAPMIIH 153
Query: 191 AAKELRLLTKRMPSFRALFGESHDAI-----PQLLSPLSESKCENGINPNLQEDVITTLL 245
A + L+ +R F S +++ P PL+ +P+ I TL
Sbjct: 154 HA-DSELMGRR--DFNNSTTSSDESVIVAHSPFTPLPLTTRPACFSPSPSSSSSEIETLT 210
Query: 246 NLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGAL 305
+ + N+ E VI + L+S I + + ++ + V S +
Sbjct: 211 HHTFFSNSTSTATEEDEVI---YNKLKSSEIFDQEQGLIMMRKMTRTNDEARVSLCSPRI 267
Query: 306 KPLI-DLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHV--DEL 362
L+ +++ + + +++ NL + +NK VR G V +++ + G +
Sbjct: 268 LSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSGSREAQEHA 327
Query: 363 LAILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNK-ENCIAILH-TICLSDRTK 418
+ LS IG LG + +L +R + DR + ++ +A+ H T+ ++R+K
Sbjct: 328 AGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSK 385
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 212 (79.7 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
++ P EF+CP+S +LM+DPVI+++G T+DR I+ W+ +GN+TCP T VL+ PNH
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 138 LIREMISQWCRSQGIEL 154
IR+MI WC +G L
Sbjct: 89 TIRKMIQGWCVEKGSPL 105
Score = 64 (27.6 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 18/91 (19%), Positives = 41/91 (45%)
Query: 359 VDELLAILA-MLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRT 417
++E+L++L M + ++ C+ +++ ST D ++N I+ I D T
Sbjct: 187 LNEILSLLTWMFPIGLEGISKLASATSFRCVAGLLK-STDDSVRQNAAFIMKEILSLDET 245
Query: 418 KWKAMREEESTHGTISKLAQDGTARAKRKAT 448
+ + E + KL +D + + K++
Sbjct: 246 RVHSFAVENGVAEALVKLIRDSVSSSSTKSS 276
Score = 57 (25.1 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 33/158 (20%), Positives = 68/158 (43%)
Query: 257 VAETPMVIPLLMDALRSGTIETRSNAAAAL-FTLSALDSNKEVIGKSGALKPLIDLLDEG 315
VAE ++ L+ D++ S + T+S+ A L + E + + G + ++++ +
Sbjct: 256 VAEA--LVKLIRDSVSSSS--TKSSLIAIYQMVLQKPEIASEFL-EIGLVSITVEMIVDA 310
Query: 316 HQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL-KKIMDGVHV---DELLAILAMLST 371
S + + + +C T + ++ V +L KKI + + IL + T
Sbjct: 311 ENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKT 370
Query: 372 -NHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAIL 408
N AVE+ LG +L +++ + KE +L
Sbjct: 371 GNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELL 408
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 222 (83.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 97/400 (24%), Positives = 184/400 (46%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
++ P +F+CP+S ELM+DPVI+ASG T+DR I++W ++G +TCP T VL+ PNH
Sbjct: 31 ITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNH 90
Query: 138 LIREMISQWCRSQ---GIE-LPNSVQYINEEGITE-ADRDHFLSLLKKMSATLPDQTEAA 192
IR MI WC S GIE +P + ++E +R + +A + E
Sbjct: 91 TIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACM----EMV 146
Query: 193 KELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQED---VITTLLNLSI 249
++ L K R E+ + +L ++ EN L E+ V+T +L + +
Sbjct: 147 TKMTRLGKESERNRKCVKENGAGL--VLCVCFDAFSENANASLLLEETVSVLTWMLPIGL 204
Query: 250 HDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALD-SNKEVIGKSGALKPL 308
+ KL T L++ LR+G NAA + L L+ ++ + K ++
Sbjct: 205 -EGQSKLT--TTSSFNRLVELLRNGD----QNAAFLIKELLELNVTHVHALTKINGVQEA 257
Query: 309 IDLLDEGHQSAMKDVASAIFNLCITH-ENKARAVRDGGVSVILKKIMDGVH--VDELLAI 365
+ S + +I ++ +T+ E +R + V++ ++ ++D + ++ L +
Sbjct: 258 F-MKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENSVCEKALTV 316
Query: 366 LAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLS-DRTKWKAMRE 424
L ++ E++ V +L +++ K++ ++++ +C S D ++ E
Sbjct: 317 LNVICETKEGREKVRRNKLVIPIL--VKKILKISEKKDLVSVMWKVCKSGDGSEV----E 370
Query: 425 EESTHGTISKLA---QDGTARA-KRKATGILERLKRTVNL 460
E G KL Q G K K T +L+ + + + +
Sbjct: 371 EALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKM 410
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 221 (82.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 92/399 (23%), Positives = 175/399 (43%)
Query: 76 ET-VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILT 134
ET ++ P FKCP+S ++MR PV L +G T+DR IQRWL GN TCP T Q+L
Sbjct: 7 ETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFV 66
Query: 135 PNHLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKE 194
PN ++ +I+ W S G +N E +++L + +L + K
Sbjct: 67 PNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLEN---LMKI 123
Query: 195 LRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHD-NN 253
+R + K S R + + +P L+ + K + I + I + + +N
Sbjct: 124 VRFV-KDSDSNREFLSKKMEFVPMLVDIIRTKKTK--IELVIMAIRILDSIKVDRERLSN 180
Query: 254 KKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIG-KSGALKPL---I 309
L + + ++ A++ G +E++ + L +S +K +I + G L + I
Sbjct: 181 LMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEMMKSI 240
Query: 310 DLLDEGHQSAMKDVASAIFNLCITHENKARA--VRDGGVS----VILKKIMDGVHVDEL- 362
+ + S ++ AS F + I+ + R+ + ++ ++L + + V V E
Sbjct: 241 SITESSDPSLIE--ASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTEKS 298
Query: 363 LAILAMLSTNHRAVEEI-GDLGGVSCMLRIIRE--STCDRNKENCIAILHTICL---SDR 416
L +L LS+ EI GD G C+ ++++ E+ + IL +C D+
Sbjct: 299 LKLLETLSSKREGRLEICGDDNG-RCVEGVVKKLLKVSTTATEHAVTILWCLCYVFREDK 357
Query: 417 TKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLK 455
T + + + + + +A ++ A +++ LK
Sbjct: 358 TVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLK 396
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 220 (82.5 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 80/298 (26%), Positives = 138/298 (46%)
Query: 167 TEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSES 226
+ A LSL++ S + AAKE+R LTK R F + A+ L+S L
Sbjct: 62 SSASIQRVLSLIR--SEDCDSRLFAAKEIRRLTKTSHRCRRHFSQ---AVEPLVSMLRFD 116
Query: 227 KCENGINPNLQEDVITTLLNLSIHDN-NKKLVAETPMVIPLLMDALRSGTIETRSNAAAA 285
E+ E + LLNL++ D NK + E + P++ + L+S + + A+A+
Sbjct: 117 SPESH-----HEAALLALLNLAVKDEKNKVSIIEAGALEPII-NFLQSNSPTLQEYASAS 170
Query: 286 LFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGG 345
L TLSA +NK +IG +G + L+ ++ G A D A+ NL +N + +
Sbjct: 171 LLTLSASANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKP 230
Query: 346 VSVIL---KKIMDGVHVDELLAILA---MLSTNHRAVEEIGDLGGVSCMLRIIRESTCDR 399
+S IL K E L M+S + D GGV ++ ++ +
Sbjct: 231 LSPILNLLKSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQA 290
Query: 400 NKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLKRT 457
+E+ + +L T+C SDR+K++ E + +L GT++++ KA +L L+ +
Sbjct: 291 -REHAVGVLLTLCQSDRSKYREPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNS 347
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 193 (73.0 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
PE+FKC LS+ +M DPVI++SG TF+R IQ+W GN +CP +++ L L PN ++
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 141 EMISQWCRSQGIEL 154
IS+WC G+++
Sbjct: 280 SQISEWCAKNGLDV 293
Score = 74 (31.1 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 36/184 (19%), Positives = 74/184 (40%)
Query: 276 IETRSNAAAALFTLSALDSNKE---VIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCI 332
+E+ A AL L L ++ I SG+L L+ +++ + + + NL
Sbjct: 473 LESEVVAEEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSS 532
Query: 333 THENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRII 392
+ E V + + + V + IL L + + I + + +
Sbjct: 533 SMEICLEMVSLDFIQKLTSFLQQKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAEL 592
Query: 393 RESTCDRNKENCIAILHTICLSDRTKWKAM--REEESTHGTISKLAQDGTARAKRKATGI 450
ES +EN I+IL +C+ + ++ + RE + ++ ++ +GT K A+ +
Sbjct: 593 LESNVPEEQENAISILLQLCVQ-KIEYCCLVVREATDIYSSLILISNNGTEEVKVSASEL 651
Query: 451 LERL 454
L L
Sbjct: 652 LRAL 655
Score = 65 (27.9 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 32/125 (25%), Positives = 58/125 (46%)
Query: 175 LSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINP 234
L ++K+++ L Q K ++ K + S G + P L+ ++E E+ + P
Sbjct: 543 LDFIQKLTSFL-QQKVFCKHSIIILKNLCSTEKGRGCITET-PDCLASIAEL-LESNV-P 598
Query: 235 NLQEDVITTLLNLSIHDNNK--KLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSAL 292
QE+ I+ LL L + +V E + L+ +GT E + +A+ L L +
Sbjct: 599 EEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRALVEV 658
Query: 293 DSNKE 297
DS+KE
Sbjct: 659 DSDKE 663
Score = 56 (24.8 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 30/116 (25%), Positives = 50/116 (43%)
Query: 178 LKKMSATLPDQTEAAKELRLLT-KRMPSFRALFGE--SHDAIPQLLSPLSESK-CENGIN 233
L + + Q E +E ++T K + S + E S D I +L S L + C++ I
Sbjct: 505 LSSLLKIVESQAEHLQEQAMITLKNLSSSMEICLEMVSLDFIQKLTSFLQQKVFCKHSI- 563
Query: 234 PNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTL 289
+I L NL + + + ETP + + + L S E + NA + L L
Sbjct: 564 ------II--LKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQL 611
Score = 43 (20.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 21/96 (21%), Positives = 41/96 (42%)
Query: 365 ILAMLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMRE 424
+LA LS N RA+E + + V M + ES + E + IL LS+ +
Sbjct: 447 LLAFLSGNRRAIESLEE--EVFKMFSVFLES--EVVAEEALNILEV--LSNHPHGPSKIT 500
Query: 425 EESTHGTISKLAQDGTARAKRKATGILERLKRTVNL 460
+ ++ K+ + + +A L+ L ++ +
Sbjct: 501 SSGSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEI 536
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 216 (81.1 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 85/385 (22%), Positives = 167/385 (43%)
Query: 76 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTP 135
E P F CP+S E M+DPV L +GQT++R I +W G+ TCP T Q L ++TP
Sbjct: 56 ELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTP 115
Query: 136 NHLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKEL 195
N + ++I W + + + + + I L L+K + A EL
Sbjct: 116 NKTLHQLIYTWFSQKYVLMKKRSEDVQGRAI------EILGTLRKAKGKA--KVHALSEL 167
Query: 196 R-LLTKRMPSFRALFGESHD-AIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNN 253
+ ++ + + + E I LLSP + + + I L+NL + D++
Sbjct: 168 KQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHA--------VGSEAIAILVNLEL-DSD 218
Query: 254 KKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTL-SALDSNKEVIGKSGALKPLIDLL 312
K P + L++D L G+IET+ N A + L E++ L L+ L+
Sbjct: 219 SKAGLMQPARVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLV 278
Query: 313 -DEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKI--MDGVHVDELLAILAML 369
D ++ + + + ++ + + + VR G V ++ + +D ++ L +L L
Sbjct: 279 KDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSL 338
Query: 370 STNHRAVEEIGD-LGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEEST 428
+ D + + +R++ + + ++ I+IL ++C + ++ E
Sbjct: 339 CLESEGRIALKDSVNTIPHTVRLLMKVS-EKCTNYAISILWSVCKLASEECSSLAVEVGL 397
Query: 429 HGTISKLAQDGTARA-KRKATGILE 452
+ + Q G A K+++ +L+
Sbjct: 398 AAKLLLVIQSGCDPALKQRSAELLK 422
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 212 (79.7 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 85/384 (22%), Positives = 165/384 (42%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P F CP+S E M+DPV L +GQT++R I +W G+ TCP T Q L +TPN +
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 141 EMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELR-LLT 199
+I W + + + + + I L LKK + A EL+ ++
Sbjct: 125 HLIYTWFSQKYVLMKKRSEDVQGRAI------EILGTLKKAKGQA--RVHALSELKQIVI 176
Query: 200 KRMPSFRALFGESH-DAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVA 258
+ + + + E I LL P + + +V+ L++L + ++K +
Sbjct: 177 AHLMARKTVVEEGGVSVISSLLGPFTSHA--------VGSEVVAILVSLDLDSDSKSGLM 228
Query: 259 ETPMVIPLLMDALRSGTIETRSNAAAALFTL-SALDSNKEVIGKSGALKPLIDLL-DEGH 316
+ P + L++D L G+ ET+ N A + L E++ L L+ L+ D+ H
Sbjct: 229 Q-PAKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRH 287
Query: 317 QSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKI--MDGVHVDELLAILAMLSTNHR 374
++ + + + + + ++ V G V ++ + +D ++ L +L L T+
Sbjct: 288 RNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVE 347
Query: 375 AVEEIGDLGG-VSCMLRIIRESTCDRNKENC----IAILHTICLSDRTKWKAMREEESTH 429
+ D + +R++ R ENC ++IL ++C + + E
Sbjct: 348 GRVAVKDSANTIPYTVRVLM-----RVSENCTNYALSILWSVCKLAPEECSPLAVEVGLA 402
Query: 430 GTISKLAQDGT-ARAKRKATGILE 452
+ + Q G A K+++ +L+
Sbjct: 403 AKLLLVIQSGCDAALKQRSAELLK 426
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 206 (77.6 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 86/401 (21%), Positives = 169/401 (42%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
++ P F+CP+S ++M+ PV L +G T+DR IQRWL GN TCP T Q+L + PN
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNR 67
Query: 138 LIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLK--KMSATLPDQTEAAKEL 195
++ +I W S + V+ + E + RD + K+ D E ++
Sbjct: 68 TLQRLIEIW--SDSVRRRTCVE--SAE-LAAPTRDEIADAIDRVKIEKEERDDREVLSKI 122
Query: 196 RLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPN---LQEDV-ITTLLNLSIHD 251
+ R D + L+ +++ E +QE V I + + + D
Sbjct: 123 VRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSD 182
Query: 252 NNK--KLVAETPMV-IPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVI--GKSGALK 306
+ L+ + +++ ++G +E + + A L A+D+ +++ + G +
Sbjct: 183 RRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAG-LLEFIAVDAESKLLIAERDGLIT 241
Query: 307 PLIDLLDEGHQ-SAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDG-----VHVD 360
L+ + + S ++ S + + K +R+ + + K + D V V
Sbjct: 242 ELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVSVT 301
Query: 361 E-LLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRE--STCDRNKENCIAILHTICLSDRT 417
E L +L +L++ EI G C+ ++++ E+ + +L ++ +
Sbjct: 302 EKCLKLLEILASTKEGRSEICG-GDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFKE 360
Query: 418 KWKAMREEESTHGT--ISKLAQDGTARA-KRKATGILERLK 455
KA+ S +G I L Q + A +R T +L+ K
Sbjct: 361 D-KALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFK 400
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 203 (76.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 78/348 (22%), Positives = 152/348 (43%)
Query: 77 TVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPN 136
TV C FKCP+S ++M+ PV L++G T+DR IQRWL GN TCP T Q+L + PN
Sbjct: 10 TVPC--FFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPN 67
Query: 137 HLIREMISQWCRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELR 196
+ +I W S + + E T RD + +++ + +A ++
Sbjct: 68 LTLHRLIDHWSDS----INRRADSESPESDTPT-RDEINAAIERFRI----ENDARSKIL 118
Query: 197 LLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDV--ITTLLNLSIHDNNK 254
+ R D + L+ +S+S+ + L + I +++ I D +
Sbjct: 119 RFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRR 178
Query: 255 K---LVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKS-GALKPLID 310
++ + ++ G + + + +A L ++ +K +I K G + +I
Sbjct: 179 LSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIK 238
Query: 311 LLDEGHQSAMKDV-ASAIFNLCITHENKARAVRDGGVSVILKKIMD---GVHVDE-LLAI 365
L+ S++ + S + + + K +R+ V+ + + D V V E L +
Sbjct: 239 LISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKCLKL 298
Query: 366 LAMLSTNHRAVEEIGDLGGVSCML-RIIRESTCDRNKENCIAILHTIC 412
L +S+ EI D V ++ ++++ ST E+ + +L ++C
Sbjct: 299 LEAISSCKEGRSEICDGVCVETVVNKLMKVSTAAT--EHAVTVLWSVC 344
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 202 (76.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 77/295 (26%), Positives = 138/295 (46%)
Query: 175 LSLLKKM-SATLPDQTEAAKELRLLTKRMPSFRALFGESHDA--IPQLLSPLSESKCENG 231
L L KK+ L + EAAKE+R L ++ P + + DA IP L+ L S
Sbjct: 48 LHLSKKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSS----- 102
Query: 232 INPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSA 291
N + + + LLNL++ + K+ +P L+ L+ R A AA+ TLSA
Sbjct: 103 -NVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSA 161
Query: 292 LDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILK 351
+NK +I SG LI +L G D +A+ NL E A + V ++
Sbjct: 162 APANKAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIH 221
Query: 352 KIMD-GVH---VDELLAILAMLSTN----HRAVEEIGDLGGVSCMLRIIRESTCDRNKEN 403
+ + H ++ A++ M+ ++ A+ D G+ ++ + + + + E+
Sbjct: 222 LLKECKKHSKFAEKATALVEMILSHSEDGRNAITSCED--GILTLVETVEDGS-PLSIEH 278
Query: 404 CIAILHTICLSDRTKW-KAMREEESTHGTISKLAQDGTARAKRKATGILERLKRT 457
+ L ++C SDR K+ K + +E + G +S DGT++++ +A +L+ L+ T
Sbjct: 279 AVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTV-DGTSKSRDRARVLLDLLRET 332
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 180 (68.4 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+EF CP+++E+M+DPVI A G +++R I+ W+ NRT P T L T+LTPN ++
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 141 EMISQWCRSQ 150
I +W SQ
Sbjct: 478 MAIFRWSTSQ 487
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 82 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIRE 141
E+FKCP+S E+MRDP + A G T++ ++WL++G RT P+T + L + L PNH +R
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 142 MISQW 146
+I W
Sbjct: 295 IIKDW 299
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 85/314 (27%), Positives = 146/314 (46%)
Query: 163 EEGITEADRDHFLSLLKKMSATLPDQTEA-----------AKELRLLTKRMPSFRALFGE 211
E G+ ++ L +LK++ L + EA A E+RLL K R
Sbjct: 90 ESGVETKKKEETLEILKRVVKDLQAEAEAEAEAAEKKIAAASEVRLLAKDDIEARVTLAM 149
Query: 212 SHDAIPQLLSPLS-ESKCENGINPNLQEDVITTLLNLSI-HDNNKKLVAETPMVIPLLMD 269
AIP L+S + ES+ E+ + +L LLNL I +D NK + + +V +L
Sbjct: 150 L-GAIPPLVSMIDDESQSEDALIASLY-----ALLNLGIGNDVNKAAIVKAGVVHKMLK- 202
Query: 270 ALRSGTIETRSNAAA--ALFT-LSALDSNKEVIGKSGALKPLIDLL---DEGHQS-AMKD 322
+ S ++ A A A F LSALDSNK +IG SGA+ L+ L +E S A +D
Sbjct: 203 LVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLVKTLKNFEETSSSQARED 262
Query: 323 VASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGDL 382
A++NL I H+N + + + +L + D + +LAIL + + + IG++
Sbjct: 263 ALRALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAILTNVVSVPEGRKAIGEV 322
Query: 383 -GGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTA 441
++ ++ + + +E + IL + AM E ++ +L G+
Sbjct: 323 VEAFPILVDVLNWNDSIKCQEKAVYILMLMAHKGYGDRNAMIEA-GIESSLLELTLVGSP 381
Query: 442 RAKRKATGILERLK 455
A+++A+ +LE L+
Sbjct: 382 LAQKRASRVLECLR 395
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 142 (55.0 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 82 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNR-----TCPRTQQVLSHTILTPN 136
E F CPL+K++M +PV L +GQTF+R I++W + +CP T + LS T L+P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 137 HLIREMISQW-CRSQGIEL 154
+R I +W R+ ++L
Sbjct: 87 IALRNTIEEWRARNDALKL 105
Score = 81 (33.6 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 215 AIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSG 274
AI L PL E +P + + L L+++++ K +VA+T V L+D +R+
Sbjct: 270 AINGRLQPLLAKLLEG--SPETKVSMAFYLGVLALNNDVKVIVAQT--VGSSLIDLMRTR 325
Query: 275 TIETRSNAAAALFTLSALDSNKEVIGKSGALKPLI-DLLDEGHQSA---MKDVASAI 327
+ R A AL +S+ + + +++ +G L PLI DL G +K+V++ I
Sbjct: 326 DMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVSATI 382
Score = 65 (27.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 41/198 (20%), Positives = 83/198 (41%)
Query: 177 LLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNL 236
+LK S + + +A + L+++ + +A+ E D + ++ LS+ +
Sbjct: 154 MLKSSSHEV--RCKALQTLQVVVEGDEESKAIVAEG-DTVRTIVKFLSQEPSKG------ 204
Query: 237 QEDVITTLLNLSIHDNNKKLVAETPMVIPLL--MDALRSGTIETRSNAAAALFTLSALDS 294
+E ++ L LS + + + I LL + + +S + T A L L +
Sbjct: 205 REAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEE 264
Query: 295 NKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVI-LKKI 353
N + +G L+PL+ L EG +A + L + ++ K + G S+I L +
Sbjct: 265 NVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQTVGSSLIDLMRT 324
Query: 354 MDGVHVDELLAILAMLST 371
D + L L +S+
Sbjct: 325 RDMSQREAALGALNNISS 342
Score = 49 (22.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 216 IPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETP 261
+P L L +S ++ N+Q T L NLS+ N + E P
Sbjct: 600 LPSLFLDLLQSNSQD----NIQRASATALENLSLESKNLTKIPELP 641
Score = 45 (20.9 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 38/171 (22%), Positives = 69/171 (40%)
Query: 264 IPLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDV 323
+ + +L G ET N AL + + N I + L+ L+ + +S+ +V
Sbjct: 105 LDIARQSLYLGNAET--NILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHEV 162
Query: 324 -ASAIFNLCIT----HENKARAVRDGGVSVILKKIMDGVHV--DELLAILAMLSTNHRAV 376
A+ L + E+KA V I+K + + +++L LS +
Sbjct: 163 RCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALC 222
Query: 377 EEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEES 427
E+IG + G +L + S EN + T+ +D+T R EE+
Sbjct: 223 EKIGSIHGAIILLVGLTSS----KSEN----VSTVEKADKTLTNLERSEEN 265
Score = 44 (20.5 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 214 DAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRS 273
D I +L+ L E++ EN L+ + + + + + V E V L+DA ++
Sbjct: 727 DGITPILNVLLENRTEN-----LRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQN 781
Query: 274 GTIETRSNAAAAL 286
TR A AL
Sbjct: 782 ADFRTRQIAEKAL 794
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 78 VSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNH 137
V+ P+EF CP+++ELM+DPVI A G ++++ ++ W+ R+ P T L +LTPN
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNR 461
Query: 138 LIREMISQWCRSQ 150
++ IS+W +Q
Sbjct: 462 TLKMAISRWLETQ 474
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+EF CP+++ELM+DP+I + G ++++ ++ W+ RT P T VLS ILTPN ++
Sbjct: 404 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLK 463
Query: 141 EMISQW 146
I +W
Sbjct: 464 MAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+EF CP+++ELM+DP+I + G ++++ ++ W+ RT P T VLS ILTPN ++
Sbjct: 405 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLK 464
Query: 141 EMISQW 146
I +W
Sbjct: 465 MAIDRW 470
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 74/283 (26%), Positives = 124/283 (43%)
Query: 181 MSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDV 240
+S Q EAA EL L+++ R E + I LLS L C E
Sbjct: 10 LSGNRESQIEAAIELTNLSRKQ---RQKLAE-REIISPLLSMLQSQDCIT------TEVA 59
Query: 241 ITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGT-IETRSNAAAALFTLSALDSNKEVI 299
++ LL+L+ K+ +P L++ L+S T + A A L LS+ + NK +
Sbjct: 60 LSALLSLAFGSERNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKM 119
Query: 300 GKSGALKPLIDL--LDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKI---- 353
+ ++ L+ L LD A D + + NL H+ + G +L+ I
Sbjct: 120 ASTRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVINFCD 179
Query: 354 MDGVHVDELLAILA-MLSTNHRAVEEIGDLGGVSCMLRIIRESTCDRNKENCIAILHTIC 412
D+ +A+L ++S + +V IG G + ++ I E + + KE+ + IL IC
Sbjct: 180 KSSELADKAVALLENIISHSPESVSSIG--GAIGVLVEAIEEGSA-QCKEHAVGILLGIC 236
Query: 413 LSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLK 455
+DR + M E + +++ DGT RAK A +L L+
Sbjct: 237 NNDRETNRGMILREGVMPGLLQVSVDGTRRAKEMARELLLLLR 279
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 154 (59.3 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 59/224 (26%), Positives = 101/224 (45%)
Query: 82 EEFKCPLSKELMRDPVILASGQTFDRPYIQRWLK----AGNR-TCPRTQQVLSHTILTPN 136
E F CPL+KE+M DPV L +G+TF+R I++W K +G +CP T Q L+ T ++ +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 137 HLIREMISQW-CRSQGIELPNSVQYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKEL 195
+R I +W R+ +L + Q + G E D L ++++ T+ +
Sbjct: 85 IALRNTIEEWRSRNDAAKLDIARQSLFL-GNAETDILQALMHVRQICRTIRSNRHGVRNS 143
Query: 196 RLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKK 255
+L+ + ++ Q L + E E+ + D + TL+ H+ +K
Sbjct: 144 QLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIV-AEGDTVRTLVKFLSHEPSKG 202
Query: 256 LVAETPMVIPLLMDALRSGTI-ETRSNAAAALFTLSAL-DSNKE 297
A + LL + +S + E + AL L L SN E
Sbjct: 203 REA----AVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSE 242
Score = 63 (27.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 25/126 (19%), Positives = 56/126 (44%)
Query: 343 DGGVSVILKKIMDGVHVDELLAILAMLSTN-------HRAVEEIGDLGGVSCMLRIIRES 395
+GG L ++D +V + A LA LS+ + V+ + + G+ +L ++RE+
Sbjct: 670 EGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLREN 729
Query: 396 TCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERLK 455
+R + ++ I + + + EE+S + Q+ R ++ A L+ +
Sbjct: 730 RTERLTRRAVWMVERILRIEDIA-REVAEEQSLSAALVDAFQNADFRTRQIAENALKHID 788
Query: 456 RTVNLT 461
+ N +
Sbjct: 789 KIPNFS 794
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 301 KSGALKPLIDLLDEGHQSAMKDVASAIFNL 330
+ GA++ L+ LLD + ++ +A+ +L
Sbjct: 670 EGGAVEKLVALLDHENVKVVEAALAALSSL 699
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 163 (62.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 75/307 (24%), Positives = 149/307 (48%)
Query: 169 ADRDHFLSLLKKMSATLPDQTEAAK--ELRLLTKRMPSFRALFGESHDAIPQLLSPLSES 226
A R +++ ++S+ + +QT AA ELRL++K+ P R + ++ AIP L L S
Sbjct: 4 AKRRTMSTIVSRLSS-VSEQTRAAALAELRLISKQDPDSRLIIADA-GAIPYLAETLYSS 61
Query: 227 KCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET-----RSN 281
+ QE+ TLLNLSI +++ + + ++ L ALR T +S+
Sbjct: 62 SHSS------QENAAATLLNLSI--TSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSS 113
Query: 282 AAAALFTLSALDSNKEVIG-KSGALKPLIDLL--DEGHQSAMKDVASAIFNLCITHENKA 338
AA L A +S + +IG K + LI ++ + H ++KD A+F + + N++
Sbjct: 114 AATIYSLLIAEESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRS 173
Query: 339 RAVRDGGV----SVILKKIMDGVHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRIIRE 394
+ G + S+I+K G+ V++ A++A ++ + + + + G + + ++
Sbjct: 174 TMISLGAIPALFSLIVKDSRCGI-VEDATAVMAQVAGCEDSEDGMRRVSGANVLADLLDP 232
Query: 395 STCD--RNKENCIAILHTI--C--LSDRTKWKAMREEESTHGTISKL---AQDGTARAKR 445
T R KEN + L + C + R++ A + G + + A++G+ + ++
Sbjct: 233 CTGSSLRIKENSVGALLNLARCGGAAARSEVAAAVASGADEGAMEGIVYVAENGSLKGRK 292
Query: 446 KATGILE 452
KA +L+
Sbjct: 293 KAVDLLK 299
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+EF CP+++ELM+DPVI + G ++++ ++ W+ RT P T +L +LTPN ++
Sbjct: 405 PDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTLK 464
Query: 141 EMISQW 146
IS+W
Sbjct: 465 MAISRW 470
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+EF CP+++ELM+DPVI + G ++++ ++ W+ RT P T VL +LTPN ++
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLK 464
Query: 141 EMISQW 146
I++W
Sbjct: 465 MAINRW 470
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 163 (62.4 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 81/277 (29%), Positives = 127/277 (45%)
Query: 191 AAKELRLLTKRMPSFRALFGESHDAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSI- 249
AA E+RLL K R AIP L+S + +S+ + Q + LLNL I
Sbjct: 163 AASEVRLLAKEDSEARVTLAML-GAIPPLVSMIDDSRIVDA-----QIASLYALLNLGIG 216
Query: 250 HDNNKKLVAETPMVIPLL--MDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKP 307
+D NK + + V +L +++ + E A LSALDSNK +IG SGA+
Sbjct: 217 NDANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIF 276
Query: 308 LIDLL---DEGHQS-AMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVDELL 363
L+ L DE S A +D A++NL I N + + ++ +L + D + V E
Sbjct: 277 LVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGD-MEVSE-- 333
Query: 364 AILAMLSTNHRAVEEIGDLGGVSC-----MLRIIRESTCDRNKENCIAILHTICLSDRTK 418
ILA+LS N AV E G+ C ++ ++ + +E IL +
Sbjct: 334 RILAILS-NLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKGYGD 392
Query: 419 WKAMREEESTHGTISKLAQDGTARAKRKATGILERLK 455
+ M E + +L G+A A+++A+ ILE L+
Sbjct: 393 RQVMIEA-GIESALLELTLLGSALAQKRASRILECLR 428
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+EF CP+++ELM+DPVI + G +++R ++ W+ RT P T L +LTPN ++
Sbjct: 403 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLK 462
Query: 141 EMISQW 146
I++W
Sbjct: 463 MAINRW 468
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+EF CP+++ELM+DPVI + G +++R ++ W+ RT P T L +LTPN ++
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLK 464
Query: 141 EMISQW 146
I++W
Sbjct: 465 MAINRW 470
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 158 (60.7 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P F CP+S+E+MR+P + A G T++ ++ WL G+ T P T L+H L PNH +R
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 141 EMISQW 146
I +W
Sbjct: 558 SAIQEW 563
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+ F CP+S E+M+DP + A G T++ I WL+ G+ T P T L HT L PN +R
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 141 EMISQW 146
I +W
Sbjct: 386 SAIQEW 391
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 156 (60.0 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P + CP+ KE+M DP I A G T++R I+ W++ P T+ L H+ LTPNH +R
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 141 EMISQWCRSQGIELPNSV 158
I +W ++L ++
Sbjct: 769 SAIREWRSRSRLDLSTTL 786
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/118 (29%), Positives = 58/118 (49%)
Query: 233 NPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSAL 292
+P +Q L NL++++ NK L+ E + PL+ + + +E + NA + L+
Sbjct: 98 DPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLI-NQMMGDNVEVQCNAVGCITNLATR 156
Query: 293 DSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL 350
D NK I SGAL PL L H ++ A+ N+ + EN+ V G V V++
Sbjct: 157 DDNKHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLV 214
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 42/172 (24%), Positives = 83/172 (48%)
Query: 231 GINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLS 290
G N +Q + + + NL+ D+NK +A + +IPL A +S I + NA AL ++
Sbjct: 137 GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLA-KSKHIRVQRNATGALLNMT 195
Query: 291 ALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKAR-AVRDGGVSVI 349
+ N++ + +GA+ L+ LL +A+ N+ + N+ + A + +
Sbjct: 196 HSEENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSK 255
Query: 350 LKKIMDG----VHVDELLAILAMLS-TNHRAVEEIGDLGGVSCMLRIIREST 396
L +MD V LA+ + S T+++ EI GG+ ++++I+ +
Sbjct: 256 LVSLMDSPSSRVKCQATLALRNLASDTSYQL--EIVRAGGLPHLVKLIQSDS 305
Score = 118 (46.6 bits), Expect = 0.00084, P = 0.00084
Identities = 47/193 (24%), Positives = 86/193 (44%)
Query: 265 PLLMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVA 324
P+L+ L+S + + A AAL L+ + NK +I + G L+PLI+ + + +
Sbjct: 89 PILI-LLQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLINQMMGDNVEVQCNAV 147
Query: 325 SAIFNLCITHENKARAVRDGGVSVILKKIMDGVHVD-ELLAILAMLSTNHRAV--EEIGD 381
I NL +NK + G + + L K+ H+ + A A+L+ H +E+ +
Sbjct: 148 GCITNLATRDDNKHKIATSGAL-IPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVN 206
Query: 382 LGGVSCMLRIIRESTCDRNKENCIAILHTICLSDRTKWKAMREEESTHGTISKLAQDGTA 441
G V ++ ++ ST + C L I + + + K + E + L ++
Sbjct: 207 AGAVPVLVSLL-SSTDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSS 265
Query: 442 RAKRKATGILERL 454
R K +AT L L
Sbjct: 266 RVKCQATLALRNL 278
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 145 (56.1 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+ F CP++ ++M DP + A G T++ I RW + G+ T P + L HT L PN +R
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 141 EMISQW 146
I +W
Sbjct: 414 SAIQEW 419
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P F CP+ +E+M+DP + A G T++ I+ WL + + T P T LSHT L NH +R
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 141 EMISQW 146
I +W
Sbjct: 824 SAIQEW 829
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P + CP+ +E+M +P I A G T++R I WL+ N + P T+Q L H LTPNH +R
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKLTPNHTLR 784
Query: 141 EMISQW 146
I W
Sbjct: 785 SAIRDW 790
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P F CPL K++M++P I A G T+DR I+ W++ +RT P T L + L PNH +
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 141 EMISQW 146
I +W
Sbjct: 809 AAIVEW 814
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 62/243 (25%), Positives = 108/243 (44%)
Query: 161 INEEGITEADRDHFLSLLKKM-SATLPDQTEAAKELRLLTKRMPS--FRALFGESHDAIP 217
I E + E DRD +L + S+ + Q A+ L L + G I
Sbjct: 95 ITERDVREVDRDTLEPILFLLQSSDIEVQRAASAALGNLAVNADNKVLIVALGGLAPLIK 154
Query: 218 QLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIE 277
Q++SP E +C N + IT NL+ H++NK +A + + PL+ A +S +
Sbjct: 155 QMMSPNVEVQC-NAVG------CIT---NLATHEDNKAKIARSGALGPLIRLA-KSKDMR 203
Query: 278 TRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENK 337
+ NA AL ++ D N++ + +GA+ L+ LL +A+ N+ + N+
Sbjct: 204 VQRNATGALLNMTHSDDNRQQLVNAGAIPVLVQLLSSSDVDVQYYCTTALSNIAVDASNR 263
Query: 338 AR-AVRDGGVSVILKKIMDG----VHVDELLAILAMLSTNHRAVEEIGDLGGVSCMLRII 392
R A + + L +MD V LA L L+++ + EI G+ +LR++
Sbjct: 264 KRLAQTESRLVQSLVHLMDSSTPKVQCQAALA-LRNLASDEKYQLEIVRAKGLPPLLRLL 322
Query: 393 RES 395
+ S
Sbjct: 323 QSS 325
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 42/144 (29%), Positives = 66/144 (45%)
Query: 236 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 295
+Q L NL+++ NK L+ E + PL+ + S IE + NA + L+ D N
Sbjct: 103 VQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMM-STNIEVQCNAVGCITNLATQDDN 161
Query: 296 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 355
K I KSGAL PL L ++ A+ N+ + EN+ V G V V++ ++
Sbjct: 162 KSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVS-LLS 220
Query: 356 GVHVDELLAILAMLSTNHRAVEEI 379
D LS + AV+E+
Sbjct: 221 NEDADVQYYCTTALS--NIAVDEV 242
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 42/144 (29%), Positives = 66/144 (45%)
Query: 236 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 295
+Q L NL+++ NK L+ E + PL+ + S IE + NA + L+ D N
Sbjct: 103 VQRAACGALGNLAVNTENKILIVEMGGLEPLIRQMM-STNIEVQCNAVGCITNLATQDDN 161
Query: 296 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIMD 355
K I KSGAL PL L ++ A+ N+ + EN+ V G V V++ ++
Sbjct: 162 KSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVS-LLS 220
Query: 356 GVHVDELLAILAMLSTNHRAVEEI 379
D LS + AV+E+
Sbjct: 221 NEDADVQYYCTTALS--NIAVDEV 242
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 140 (54.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 58/223 (26%), Positives = 97/223 (43%)
Query: 166 ITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSF--RALFGESHDAIPQLLSPL 223
+ A H L +L + Q +AA+ L L S A G+ A+ L+ L
Sbjct: 551 VARAGGVHALVMLARNCKYEGAQEQAARALANLAAHGDSNGNNAAVGQEAGALEALVQ-L 609
Query: 224 SESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET--RSN 281
++S E G+ +++ L NL+ D N++ +A V L+ A S T +
Sbjct: 610 TQSPHE-GV----KQEAAGALWNLAFDDKNRESIAAFGGVEALVALAKSSSNASTGLQER 664
Query: 282 AAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAV 341
A AL+ LS ++N IG G + PLI L+ + + A A++NL N R V
Sbjct: 665 VAGALWGLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALRIV 724
Query: 342 RDGGVSVILKKIMDGVH-VDELLAILAMLSTNHRAVEEIGDLG 383
+GGV +++ V + +A LA+ ++E +G
Sbjct: 725 EEGGVVALVQLCSSSVSKMARFMAALALAYMFDGRMDEYAMIG 767
>TAIR|locus:2056529 [details] [associations]
symbol:AT2G05810 "AT2G05810" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC006555 EMBL:AY099770
EMBL:BT015173 IPI:IPI00537341 PIR:F84471 RefSeq:NP_178638.1
RefSeq:NP_849939.1 UniGene:At.13408 UniGene:At.75216
ProteinModelPortal:Q8S8G1 SMR:Q8S8G1 EnsemblPlants:AT2G05810.1
EnsemblPlants:AT2G05810.2 GeneID:815132 KEGG:ath:AT2G05810
TAIR:At2g05810 eggNOG:NOG247895 HOGENOM:HOG000243018
InParanoid:Q8S8G1 OMA:WSQNPLL PhylomeDB:Q8S8G1
ProtClustDB:CLSN2683236 ArrayExpress:Q8S8G1 Genevestigator:Q8S8G1
Uniprot:Q8S8G1
Length = 580
Score = 137 (53.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 49/228 (21%), Positives = 107/228 (46%)
Query: 233 NPNLQEDVIT--TLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLS 290
+P ++E + +LL S D+ +K V E + PLL L +G+ ++ AA A+ ++
Sbjct: 215 HPLIREHALAAVSLLTSSSADS-RKTVFEQGGLGPLLR-LLETGSSPFKTRAAIAIEAIT 272
Query: 291 ALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL 350
A + I G + LI+ G + + +A AI N+ E + +G + V++
Sbjct: 273 ADPATAWAISAYGGVTVLIEACRSGSKQVQEHIAGAISNIAAVEEIRTTLAEEGAIPVLI 332
Query: 351 KKIMDGVH-VDELLA-ILAMLSTNHRAVEE--IGDLGGVSCMLRIIRESTCDRNKENCIA 406
+ ++ G V E A ++++S++ + + + GG+ ++ +++ES+ E+C+
Sbjct: 333 QLLISGSSSVQEKTANFISLISSSGEYYRDLIVRERGGLQILIHLVQESSNPDTIEHCLL 392
Query: 407 ILHTICLSDRTKWKAMREEESTHGTISKLAQDGTARAKRKATGILERL 454
L I + T + + + +L + G ++ +T +L L
Sbjct: 393 ALSQISAME-TVSRVLSSSTRFIIRLGELIKHGNVILQQISTSLLSNL 439
>TAIR|locus:2055033 [details] [associations]
symbol:ARABIDILLO-1 "AT2G44900" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0048527
"lateral root development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR001810
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181
SMART:SM00185 SMART:SM00256 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0048527 EMBL:AC002388 IPI:IPI00521082
PIR:T00403 RefSeq:NP_566029.1 UniGene:At.53128 HSSP:Q02248
ProteinModelPortal:O22161 SMR:O22161 PaxDb:O22161 PRIDE:O22161
EnsemblPlants:AT2G44900.1 GeneID:819099 KEGG:ath:AT2G44900
TAIR:At2g44900 eggNOG:NOG48141 HOGENOM:HOG000029512
InParanoid:O22161 OMA:MDDESAN PhylomeDB:O22161
ProtClustDB:CLSN2685043 Genevestigator:O22161 Uniprot:O22161
Length = 930
Score = 139 (54.0 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 56/208 (26%), Positives = 92/208 (44%)
Query: 166 ITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFR--ALFGESHDAIPQLLSPL 223
+ +A H L +L + Q +AA+ L L S A G+ A+ L+ L
Sbjct: 560 VAKAGGVHALVMLARNCKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQ-L 618
Query: 224 SESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET--RSN 281
++S E G+ +++ L NLS D N++ ++ V L+ A T +
Sbjct: 619 TKSPHE-GV----RQEAAGALWNLSFDDKNRESISVAGGVEALVALAQSCSNASTGLQER 673
Query: 282 AAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAV 341
AA AL+ LS ++N IG+ G + PLI L + + A A++NL N R V
Sbjct: 674 AAGALWGLSVSEANSVAIGREGGVPPLIALARSEAEDVHETAAGALWNLAFNPGNALRIV 733
Query: 342 RDGGVSVILKKIMDGVH-VDELLAILAM 368
+GGV ++ V + +A LA+
Sbjct: 734 EEGGVPALVHLCSSSVSKMARFMAALAL 761
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 133 (51.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 77 TVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPN 136
++ P+ F CP+SK++M++P + A G T++ +RWL G P T L + L PN
Sbjct: 291 SIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPN 350
Query: 137 HLIREMISQW 146
++R I W
Sbjct: 351 LVLRSAIKDW 360
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 236 LQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDSN 295
+Q L NL+++ NK LV + + LL+ + S +E + NA + L+ LD N
Sbjct: 101 IQRAASVALGNLAVNAENKALVVKLNG-LDLLIRQMMSPHVEVQCNAVGCITNLATLDEN 159
Query: 296 KEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVIL 350
K I SGAL PL L ++ A+ N+ ++EN+ + V G + V++
Sbjct: 160 KSKIAHSGALGPLTRLAKSKDIRVQRNATGALLNMTHSYENRQQLVSAGTIPVLV 214
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P F CPL K++M +P + A G T+DR I+ WLK N T P T L L PN+ +
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN-TSPMTDSPLHSKNLLPNYTLY 825
Query: 141 EMISQW 146
I +W
Sbjct: 826 TAIMEW 831
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P + CP+ +E+M+DP+I A G T++ I+ WL G+ T P T + L PNH +
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 141 EMISQW 146
I W
Sbjct: 796 LAIQDW 801
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 127 (49.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 54/189 (28%), Positives = 87/189 (46%)
Query: 208 LFGESH-DAIPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPL 266
L G ++ A+ QLL+ S E +N + ++L S H + + L++E V+P
Sbjct: 206 LIGRANVAALVQLLTATSTRIREKAVN-------LISVLAESGHCD-EWLISEG--VLPP 255
Query: 267 LMDALRSGTIETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASA 326
L+ + SG++ET+ AA A+ LS + N I G + PLIDL G + A+A
Sbjct: 256 LVRLIESGSLETKEKAAIAIQRLSMTEENAREIAGHGGITPLIDLCKTGDSVSQAASAAA 315
Query: 327 IFNLCITHENKARAVRDGGVSVILKKIMDGV------HVDELLAILAMLSTNHRAVEEIG 380
+ N+ E + +G + V + + G+ H+ E L L S R E I
Sbjct: 316 LKNMSAVSELRQLLAEEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASDALR--EAIV 373
Query: 381 DLGGVSCML 389
GGV +L
Sbjct: 374 SEGGVPSLL 382
Score = 118 (46.6 bits), Expect = 0.00083, P = 0.00083
Identities = 50/196 (25%), Positives = 82/196 (41%)
Query: 159 QYINEEGITEADRDHFLSLLKKMSATLPDQTEAAKELRLLTKRMPSFRALFGESHDAIPQ 218
Q + EEGI D L L + A+ L+ LT + R S +P
Sbjct: 327 QLLAEEGIIRVSID-----LLNHGILLGSREHMAECLQNLTAASDALREAI-VSEGGVPS 380
Query: 219 LLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET 278
LL+ L P Q+ +T L NL N + VA ++P L L+SG++
Sbjct: 381 LLAYLD--------GPLPQQPAVTALRNLIPSVNPEIWVALN--LLPRLRHVLKSGSLGA 430
Query: 279 RSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKA 338
+ AA+A+ + K ++G+SG + ++ LL+ + A AI L +
Sbjct: 431 QQAAASAICRFACSPETKRLVGESGCIPEIVKLLESKSNGCREAAAQAIAGL-VAEGRIR 489
Query: 339 RAVRDGGVSVILKKIM 354
R ++ G SV+ +M
Sbjct: 490 RELKKDGKSVLTNLVM 505
>UNIPROTKB|Q7Z5J8 [details] [associations]
symbol:ANKAR "Ankyrin and armadillo repeat-containing
protein" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000225 InterPro:IPR002110
InterPro:IPR016024 Pfam:PF00023 Pfam:PF00514 PROSITE:PS50088
PROSITE:PS50176 SMART:SM00185 SMART:SM00248 GO:GO:0016021
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:AK126073 EMBL:AC012488 EMBL:AC013468
EMBL:BC044907 EMBL:BC047413 EMBL:AJ549812 IPI:IPI00374192
IPI:IPI00845277 IPI:IPI00845337 IPI:IPI00845352 RefSeq:NP_653309.3
UniGene:Hs.60772 UniGene:Hs.655700 ProteinModelPortal:Q7Z5J8
SMR:Q7Z5J8 IntAct:Q7Z5J8 STRING:Q7Z5J8 PhosphoSite:Q7Z5J8
DMDM:308153635 PRIDE:Q7Z5J8 Ensembl:ENST00000281412
Ensembl:ENST00000313581 Ensembl:ENST00000438402
Ensembl:ENST00000441800 Ensembl:ENST00000520309 GeneID:150709
KEGG:hsa:150709 UCSC:uc002uqw.2 CTD:150709 GeneCards:GC02P190539
H-InvDB:HIX0002670 HGNC:HGNC:26350 HPA:HPA036168 MIM:609803
neXtProt:NX_Q7Z5J8 PharmGKB:PA145149868 eggNOG:NOG116057
HOGENOM:HOG000007170 HOVERGEN:HBG106658 InParanoid:Q7Z5J8
OMA:HGGIEFD GenomeRNAi:150709 NextBio:86508 ArrayExpress:Q7Z5J8
Bgee:Q7Z5J8 CleanEx:HS_ANKAR Genevestigator:Q7Z5J8 Uniprot:Q7Z5J8
Length = 1434
Score = 131 (51.2 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 52/217 (23%), Positives = 103/217 (47%)
Query: 216 IPQLLSPLSESKCENGINPNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGT 275
IP L++ L SK + LQ + L N+S H + + E IP L++ L
Sbjct: 744 IPALINLLKSSKIK------LQCKTVGLLSNISTHKSAVHALVEAGG-IPSLINLLVCDE 796
Query: 276 IETRSNAAAALFTLSALDSNKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHE 335
E S A L+ ++ + NK+VI K + LI+LL+ ++ + +V + I LCI +E
Sbjct: 797 PEVHSRCAVILYDIAQCE-NKDVIAKYNGIPSLINLLNLNIENVLVNVMNCIRVLCIGNE 855
Query: 336 NKARAVRDG-GVSVILKKIMDGVHVDELL--AILAMLSTNHRAVEE-IGDLGGVSCMLRI 391
N RAVR+ G+ +++ + V + + A +A + +++ +++ I G + ++ +
Sbjct: 856 NNQRAVREHKGLPYLIRFLSSDSDVLKAVSSAAIAEVGRDNKEIQDAIAMEGAIPPLVAL 915
Query: 392 IRESTCDRNKENCIAILHTICLSDRTKWKAMREEEST 428
+ + +A+ ++ + KA E+ T
Sbjct: 916 FKGKQISVQMKGAMAV-ESLASHNALIQKAFLEKSLT 951
>TAIR|locus:2204700 [details] [associations]
symbol:AT1G77460 "AT1G77460" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000008 InterPro:IPR008973 InterPro:IPR016024
Pfam:PF00168 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SMART:SM00239 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 IPI:IPI00548388 RefSeq:NP_001185419.1
RefSeq:NP_177870.2 UniGene:At.34473 PRIDE:F4I718
EnsemblPlants:AT1G77460.1 EnsemblPlants:AT1G77460.2 GeneID:844082
KEGG:ath:AT1G77460 OMA:VAPSKEC Uniprot:F4I718
Length = 2136
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 67/275 (24%), Positives = 123/275 (44%)
Query: 177 LLKKMSA-TLPDQTEAAKELRLL--TKRMPSFRALFGESHDAIPQLLSPLSESKCENGIN 233
L++++ A T Q + RLL K R L G A+P +S L NG
Sbjct: 42 LIEQLHAKTSSPQDKELTTARLLGIAKGKREARRLIGSYGQAMPLFISML-----RNGTT 96
Query: 234 PNLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALD 293
L + + ++L + D + +L IP L+ L+SGT+ETR AA A++ +S+
Sbjct: 97 --LAKVNVASILCVLCKDKDLRLKVLLGGCIPPLLSVLKSGTMETRKAAAEAIYEVSSAG 154
Query: 294 SNKEVIGKS-----GALKPLIDLLD-EGHQSAMKD--VASAIFNLCITHENKARAVRDG- 344
+ + IG G + L D L +G+Q + + V A+ NLC + R +G
Sbjct: 155 ISNDHIGMKIFITEGVVPTLWDQLSLKGNQDKVVEGYVTGALRNLCGVDDGYWRLTLEGS 214
Query: 345 GVSVILKKIM-DGVHVDELLA-ILAMLSTNH-RAVEEIGDLGGVSCMLRIIRESTCDRNK 401
GV +++ + D + A +LA L + ++++I + G V +++++ + +
Sbjct: 215 GVDIVVSLLSSDNPNSQANAASLLARLVLSFCDSIQKILNSGVVKSLIQLLEQKNDINVR 274
Query: 402 ENCIAILHTICL-SDRTKWKAMREEESTHGTISKL 435
+ L + SD K K +++ H I +
Sbjct: 275 ASAADALEALSANSDEAK-KCVKDAGGVHALIEAI 308
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 79 SCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHL 138
+ P F CP++K++M +P + + G T+++ I+ WL+ +++ P T L PNH
Sbjct: 724 NAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSLLPNHS 782
Query: 139 IREMISQWCRSQGIE 153
+ I +W RSQ I+
Sbjct: 783 LLSAIKEW-RSQLIK 796
>TAIR|locus:2157358 [details] [associations]
symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
Length = 555
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 39/182 (21%), Positives = 81/182 (44%)
Query: 236 LQEDVITTLLNLSIHDNNKK-LVAETPMVIPLLMDALRSGTIETRSNAAAALFTLSALDS 294
++E + + +S+ +++K L+AE ++ L+ L SG+ + A AL LS
Sbjct: 202 MKEKTVAVISRISMVESSKHVLIAEGLSLLNHLLRVLESGSGFAKEKACVALQALSLSKE 261
Query: 295 NKEVIGKSGALKPLIDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKKIM 354
N IG G + L+++ G + A + NL + E K V + + V++ +
Sbjct: 262 NARAIGCRGGISSLLEICQGGSPGSQAFAAGVLRNLALFGETKENFVEENAIFVLISMVS 321
Query: 355 DGVHVDELLAI--LAMLSTNHRAVE-EIGDLGGVSCMLRIIRESTCDRNKENCIAILHTI 411
G + + A+ LA L++ + + GG+ C+ + ++ E + +L +
Sbjct: 322 SGTSLAQENAVGCLANLTSGDEDLMISVVREGGIQCLKSFWDSVSSVKSLEVGVVLLKNL 381
Query: 412 CL 413
L
Sbjct: 382 AL 383
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 79 SCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHL 138
S P F CP+S E+M+DP + + G T++ I+ W G P T L + L PN +
Sbjct: 434 SVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRV 493
Query: 139 IREMISQWCRSQ 150
+R I + + Q
Sbjct: 494 LRSFIHGYLQQQ 505
>TAIR|locus:2025497 [details] [associations]
symbol:ARK2 "armadillo repeat kinesin 2" species:3702
"Arabidopsis thaliana" [GO:0003777 "microtubule motor activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0048364
"root development" evidence=IMP] InterPro:IPR000225
InterPro:IPR001752 InterPro:IPR016024 InterPro:IPR019821
Pfam:PF00225 Pfam:PF00514 PRINTS:PR00380 PROSITE:PS00411
PROSITE:PS50067 PROSITE:PS50176 SMART:SM00129 SMART:SM00185
EMBL:CP002684 GO:GO:0005524 GO:GO:0005875 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048364 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10 UniGene:At.17002
UniGene:At.66839 IPI:IPI00938676 RefSeq:NP_001154301.1
ProteinModelPortal:F4HU83 SMR:F4HU83 PRIDE:F4HU83
EnsemblPlants:AT1G01950.3 GeneID:839306 KEGG:ath:AT1G01950
OMA:IMVRSME Uniprot:F4HU83
Length = 915
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 45/153 (29%), Positives = 73/153 (47%)
Query: 235 NLQEDVITTLLNLSIHDNNKKLVAETPMVIPLLMDALRSGTIET-RSNAAAALFTLSALD 293
N++ + + NL+ + N++ + E + LLM LRS ET R AA A+ L+ +
Sbjct: 672 NIRIHAVKVVANLAAEEANQEKIVEAGGLTSLLM-LLRSYEDETVRRVAAGAIANLAMNE 730
Query: 294 SNKEVIGKSGALKPL-IDLLDEGHQSAMKDVASAIFNLCITHENKARAVRDGGVSVILKK 352
++++I G + L + D ++ VA AI NLC + +AR DGG+ +L
Sbjct: 731 VSQQLIVDQGGISLLSLTAADAEDPQTLRMVAGAIANLCGNDKLQARLWSDGGIKALLGM 790
Query: 353 IMDGVHVDELLAILAMLSTNHRAVEEIGDLGGV 385
+ G H D +LA +A N E GV
Sbjct: 791 VRCG-HPD-VLAQVARGIANFAKCESRATTQGV 821
>UNIPROTKB|I3LQG8 [details] [associations]
symbol:LOC100737278 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564
Pfam:PF10408 SMART:SM00504 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 EMBL:FP104527 EMBL:FP565389
Ensembl:ENSSSCT00000024710 OMA:INECTHY Uniprot:I3LQG8
Length = 289
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 81 PEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTPNHLIR 140
P+EF+ PL LM DPV L SG DR I R L + T P +Q L+ ++L P ++
Sbjct: 216 PDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHL-LNSPTDPFNRQTLTESMLEPVPELK 274
Query: 141 EMISQWCRSQ 150
E I W R +
Sbjct: 275 EQIHAWMREK 284
>FB|FBgn0032467 [details] [associations]
symbol:CG9934 species:7227 "Drosophila melanogaster"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003613 InterPro:IPR019474 Pfam:PF04564 Pfam:PF10408
SMART:SM00504 EMBL:AE014134 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0000151 GO:GO:0034450
GeneTree:ENSGT00390000009300 KO:K10597 FlyBase:FBgn0032467
EMBL:AY094803 RefSeq:NP_001162967.1 RefSeq:NP_609597.1
UniGene:Dm.6565 SMR:Q9VK44 IntAct:Q9VK44 MINT:MINT-1676904
EnsemblMetazoa:FBtr0080428 EnsemblMetazoa:FBtr0301247 GeneID:34699
KEGG:dme:Dmel_CG9934 UCSC:CG9934-RA InParanoid:Q9VK44 OMA:RYANRNN
GenomeRNAi:34699 NextBio:789760 Uniprot:Q9VK44
Length = 1217
Score = 122 (48.0 bits), Expect = 0.00078, P = 0.00078
Identities = 29/75 (38%), Positives = 39/75 (52%)
Query: 76 ETVSCPEEFKCPLSKELMRDPVILASGQTFDRPYIQRWLKAGNRTCPRTQQVLSHTILTP 135
E P+EFK PL LM DPV+L SG DR I R L + T P +Q L+ +L
Sbjct: 1137 ECADAPDEFKDPLMDTLMSDPVVLPSGTVMDRAIITRHL-LNSCTDPFNRQPLTEDMLVA 1195
Query: 136 NHLIREMISQWCRSQ 150
N +++ I W + Q
Sbjct: 1196 NIELKQRIDAWRKEQ 1210
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 464 449 0.00092 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 87
No. of states in DFA: 609 (65 KB)
Total size of DFA: 263 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.88u 0.12s 39.00t Elapsed: 00:00:02
Total cpu time: 38.90u 0.12s 39.02t Elapsed: 00:00:02
Start: Fri May 10 11:14:07 2013 End: Fri May 10 11:14:09 2013