Query 012409
Match_columns 464
No_of_seqs 182 out of 650
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 02:20:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012409.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012409hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02620 indole-3-acetic acid- 100.0 9E-117 2E-121 942.1 43.1 456 2-463 128-599 (612)
2 PLN02247 indole-3-acetic acid- 100.0 6E-115 1E-119 930.0 42.2 456 2-463 116-596 (606)
3 PLN02249 indole-3-acetic acid- 100.0 6E-104 1E-108 851.5 43.9 451 4-463 129-588 (597)
4 PF03321 GH3: GH3 auxin-respon 100.0 4.3E-91 9.4E-96 748.4 34.7 400 11-448 118-528 (528)
5 COG1541 PaaK Coenzyme F390 syn 99.7 4.8E-15 1E-19 154.2 19.4 232 152-440 189-433 (438)
6 TIGR03335 F390_ftsA coenzyme F 99.6 9.6E-15 2.1E-19 154.7 18.1 229 152-418 183-431 (445)
7 TIGR02155 PA_CoA_ligase phenyl 99.4 1.1E-11 2.4E-16 129.9 20.0 224 152-418 174-410 (422)
8 TIGR02304 aden_form_hyp probab 99.4 4E-11 8.7E-16 126.5 19.5 168 152-369 194-377 (430)
9 COG1021 EntE Peptide arylation 98.9 2.4E-09 5.2E-14 109.2 7.5 127 185-336 309-459 (542)
10 PRK00174 acetyl-CoA synthetase 98.8 1.4E-06 2.9E-11 96.2 26.4 132 178-336 367-528 (637)
11 TIGR02188 Ac_CoA_lig_AcsA acet 98.8 2.3E-06 5.1E-11 94.0 26.2 119 194-336 374-520 (625)
12 PTZ00237 acetyl-CoA synthetase 98.8 6.1E-07 1.3E-11 99.5 21.3 131 178-336 380-537 (647)
13 PRK06334 long chain fatty acid 98.8 1.6E-07 3.5E-12 101.5 15.8 134 177-336 298-455 (539)
14 PRK06060 acyl-CoA synthetase; 98.7 1.1E-06 2.3E-11 98.3 22.7 133 177-336 259-410 (705)
15 PRK09274 peptide synthase; Pro 98.7 8.6E-07 1.9E-11 95.6 21.2 142 177-336 287-465 (552)
16 PRK07514 malonyl-CoA synthase; 98.7 6.8E-07 1.5E-11 94.8 19.3 135 175-336 266-422 (504)
17 PLN02574 4-coumarate--CoA liga 98.7 8.7E-07 1.9E-11 96.1 19.3 133 177-335 318-474 (560)
18 PRK04319 acetyl-CoA synthetase 98.7 2.2E-06 4.8E-11 93.1 22.3 132 177-336 322-477 (570)
19 PRK07529 AMP-binding domain pr 98.7 6.7E-07 1.5E-11 98.8 18.4 137 177-336 332-490 (632)
20 PRK13295 cyclohexanecarboxylat 98.7 1.3E-06 2.8E-11 94.4 19.9 131 177-335 311-463 (547)
21 TIGR03205 pimA dicarboxylate-- 98.7 1.8E-06 4E-11 92.9 20.7 133 178-336 312-466 (541)
22 PRK05605 long-chain-fatty-acid 98.7 9.1E-07 2E-11 96.0 18.3 134 177-336 335-490 (573)
23 PRK06155 crotonobetaine/carnit 98.6 2.4E-06 5.3E-11 92.3 20.6 131 178-336 294-445 (542)
24 PRK07788 acyl-CoA synthetase; 98.6 2E-06 4.2E-11 92.9 19.7 132 177-336 322-472 (549)
25 PRK07867 acyl-CoA synthetase; 98.6 2.6E-06 5.7E-11 91.9 19.7 125 185-335 271-425 (529)
26 PRK09088 acyl-CoA synthetase; 98.6 1.3E-06 2.8E-11 92.5 16.9 129 178-335 252-405 (488)
27 PRK05852 acyl-CoA synthetase; 98.6 1.9E-06 4.2E-11 92.6 18.2 153 152-335 274-452 (534)
28 PRK10524 prpE propionyl-CoA sy 98.6 9.4E-06 2E-10 89.3 23.9 132 178-336 355-518 (629)
29 PRK03584 acetoacetyl-CoA synth 98.6 1.1E-05 2.4E-10 89.3 24.6 225 178-451 383-647 (655)
30 PRK07786 long-chain-fatty-acid 98.6 2.1E-06 4.5E-11 92.6 18.4 127 185-335 294-443 (542)
31 PRK08974 long-chain-fatty-acid 98.6 2.5E-06 5.3E-11 92.3 18.4 130 178-335 325-476 (560)
32 PRK13382 acyl-CoA synthetase; 98.6 3.4E-06 7.5E-11 91.0 19.4 132 177-336 311-461 (537)
33 PRK07638 acyl-CoA synthetase; 98.6 2.4E-06 5.1E-11 90.6 17.5 128 185-336 258-406 (487)
34 PRK07768 long-chain-fatty-acid 98.6 4.4E-06 9.4E-11 90.0 19.6 132 269-417 380-527 (545)
35 TIGR02275 DHB_AMP_lig 2,3-dihy 98.5 5.3E-06 1.1E-10 89.1 19.8 132 178-336 299-453 (527)
36 PRK05677 long-chain-fatty-acid 98.5 7.2E-07 1.6E-11 96.7 12.8 131 177-335 325-477 (562)
37 PLN02654 acetate-CoA ligase 98.5 4.3E-05 9.3E-10 85.2 27.2 158 270-452 475-662 (666)
38 PRK06187 long-chain-fatty-acid 98.5 6E-06 1.3E-10 87.5 19.5 151 152-336 262-440 (521)
39 PRK06145 acyl-CoA synthetase; 98.5 4.4E-06 9.5E-11 88.6 18.2 132 178-336 264-418 (497)
40 PRK07656 long-chain-fatty-acid 98.5 9.3E-06 2E-10 86.1 20.4 132 178-335 281-436 (513)
41 PLN03051 acyl-activating enzym 98.5 4.4E-06 9.6E-11 89.4 18.1 44 288-335 358-401 (499)
42 PRK06164 acyl-CoA synthetase; 98.5 7.5E-06 1.6E-10 88.0 19.6 120 193-336 310-451 (540)
43 TIGR01734 D-ala-DACP-lig D-ala 98.5 1.2E-05 2.5E-10 85.4 20.7 134 176-336 256-418 (502)
44 TIGR02316 propion_prpE propion 98.5 3E-05 6.5E-10 85.5 24.6 133 178-336 354-517 (628)
45 PRK06839 acyl-CoA synthetase; 98.5 7.5E-06 1.6E-10 86.6 19.0 131 177-336 263-416 (496)
46 PRK08633 2-acyl-glycerophospho 98.5 6.1E-06 1.3E-10 96.6 19.8 133 177-336 897-1064(1146)
47 TIGR03208 cyc_hxne_CoA_lg cycl 98.5 3.7E-06 8E-11 90.5 16.2 132 177-335 309-461 (538)
48 PLN02614 long-chain acyl-CoA s 98.5 7.2E-07 1.6E-11 99.4 10.9 134 178-335 386-541 (666)
49 TIGR01733 AA-adenyl-dom amino 98.5 2.1E-06 4.6E-11 88.2 13.4 134 177-336 233-400 (408)
50 PLN02330 4-coumarate--CoA liga 98.4 5E-06 1.1E-10 89.8 16.5 122 192-336 317-462 (546)
51 PRK12406 long-chain-fatty-acid 98.4 1.3E-05 2.8E-10 85.5 19.4 131 178-336 271-424 (509)
52 PRK12583 acyl-CoA synthetase; 98.4 1E-05 2.2E-10 87.1 18.8 133 177-335 316-472 (558)
53 TIGR01217 ac_ac_CoA_syn acetoa 98.4 1.4E-05 3.1E-10 88.7 20.1 157 272-452 461-646 (652)
54 TIGR03098 ligase_PEP_1 acyl-Co 98.4 2.3E-05 5.1E-10 83.2 20.9 133 178-336 274-439 (515)
55 PRK07769 long-chain-fatty-acid 98.4 7.4E-06 1.6E-10 90.2 17.5 62 269-335 412-507 (631)
56 PRK07059 Long-chain-fatty-acid 98.4 1.7E-06 3.6E-11 93.6 12.2 127 185-336 331-480 (557)
57 PRK13383 acyl-CoA synthetase; 98.4 1.8E-05 3.9E-10 84.7 19.8 131 177-335 291-440 (516)
58 COG0318 CaiC Acyl-CoA syntheta 98.4 5.6E-06 1.2E-10 89.8 16.0 153 151-336 270-446 (534)
59 PRK08314 long-chain-fatty-acid 98.4 2.6E-06 5.6E-11 91.6 13.1 133 177-336 304-461 (546)
60 PLN02246 4-coumarate--CoA liga 98.4 1.9E-05 4.1E-10 85.0 19.3 132 178-335 298-456 (537)
61 KOG1175 Acyl-CoA synthetase [L 98.4 2.1E-05 4.5E-10 86.1 19.4 251 152-453 338-623 (626)
62 PRK03640 O-succinylbenzoic aci 98.4 3.4E-05 7.4E-10 81.4 20.7 64 269-336 326-405 (483)
63 PRK06710 long-chain-fatty-acid 98.4 2.2E-06 4.7E-11 92.8 11.8 132 178-336 323-476 (563)
64 PRK12476 putative fatty-acid-- 98.4 1.2E-05 2.7E-10 88.2 17.5 63 269-336 423-520 (612)
65 PRK08316 acyl-CoA synthetase; 98.4 2.8E-06 6.1E-11 90.3 12.1 133 178-336 286-440 (523)
66 PRK13391 acyl-CoA synthetase; 98.4 1.8E-05 3.9E-10 84.5 18.3 132 179-336 276-427 (511)
67 PRK10946 entE enterobactin syn 98.4 1.5E-05 3.4E-10 85.8 17.7 132 177-335 299-453 (536)
68 PTZ00342 acyl-CoA synthetase; 98.4 2E-05 4.3E-10 89.1 19.2 132 178-335 461-615 (746)
69 PRK08751 putative long-chain f 98.4 2.8E-06 6.1E-11 91.8 11.9 133 177-336 328-482 (560)
70 PRK07470 acyl-CoA synthetase; 98.3 1.5E-05 3.2E-10 85.5 16.8 63 269-335 360-438 (528)
71 PRK05851 long-chain-fatty-acid 98.3 3.1E-05 6.6E-10 83.4 19.1 62 270-336 367-440 (525)
72 PRK12467 peptide synthase; Pro 98.3 4.4E-06 9.6E-11 109.1 14.8 133 177-336 3350-3516(3956)
73 PRK12492 long-chain-fatty-acid 98.3 5.6E-06 1.2E-10 89.8 13.4 118 193-335 348-485 (562)
74 PLN02860 o-succinylbenzoate-Co 98.3 9.1E-06 2E-10 88.2 14.2 61 272-336 382-459 (563)
75 PRK07868 acyl-CoA synthetase; 98.3 1.5E-05 3.3E-10 92.8 16.9 146 178-336 720-881 (994)
76 PRK13390 acyl-CoA synthetase; 98.3 1.1E-05 2.4E-10 85.9 14.3 129 178-335 270-423 (501)
77 PRK05850 acyl-CoA synthetase; 98.3 3.6E-05 7.7E-10 83.7 18.3 63 269-336 391-481 (578)
78 TIGR03443 alpha_am_amid L-amin 98.3 3.9E-06 8.4E-11 100.6 11.8 137 177-336 528-723 (1389)
79 PRK10252 entF enterobactin syn 98.3 1E-05 2.2E-10 96.2 15.0 132 178-336 717-882 (1296)
80 PRK13388 acyl-CoA synthetase; 98.3 8.6E-06 1.9E-10 88.1 13.1 129 191-335 276-424 (540)
81 PRK04813 D-alanine--poly(phosp 98.3 7.1E-06 1.5E-10 86.8 12.3 133 177-336 259-420 (503)
82 PLN02861 long-chain-fatty-acid 98.3 5.5E-06 1.2E-10 92.2 11.7 61 271-335 461-538 (660)
83 PRK08043 bifunctional acyl-[ac 98.3 2.5E-05 5.5E-10 87.6 17.0 45 288-336 592-636 (718)
84 PRK06087 short chain acyl-CoA 98.2 3.9E-05 8.4E-10 82.7 17.7 130 178-335 302-454 (547)
85 PLN02736 long-chain acyl-CoA s 98.2 6E-06 1.3E-10 91.5 11.6 134 179-336 377-533 (651)
86 KOG1176 Acyl-CoA synthetase [L 98.2 2E-05 4.3E-10 85.6 14.8 134 177-336 298-453 (537)
87 PRK07445 O-succinylbenzoic aci 98.2 4.7E-06 1E-10 88.4 9.8 61 272-336 298-369 (452)
88 PRK12316 peptide synthase; Pro 98.2 2E-05 4.3E-10 105.1 17.6 150 152-336 2243-2426(5163)
89 PRK08315 AMP-binding domain pr 98.2 6.2E-05 1.3E-09 81.2 18.6 135 177-336 314-472 (559)
90 PRK07787 acyl-CoA synthetase; 98.2 7.9E-05 1.7E-09 78.9 18.7 131 178-335 241-395 (471)
91 PLN03052 acetate--CoA ligase; 98.2 0.00012 2.6E-09 82.7 21.0 43 289-335 591-633 (728)
92 PRK08276 long-chain-fatty-acid 98.2 9.8E-05 2.1E-09 78.5 19.4 130 178-336 262-414 (502)
93 PRK07798 acyl-CoA synthetase; 98.2 8.5E-05 1.8E-09 79.1 18.6 133 178-336 296-453 (533)
94 PRK06188 acyl-CoA synthetase; 98.2 7.7E-05 1.7E-09 79.9 17.7 63 269-335 359-437 (524)
95 PLN02387 long-chain-fatty-acid 98.1 1.3E-05 2.9E-10 89.7 11.9 134 178-335 420-580 (696)
96 PRK07008 long-chain-fatty-acid 98.1 0.00015 3.3E-09 78.2 19.3 58 274-335 383-453 (539)
97 PRK12467 peptide synthase; Pro 98.1 2.1E-05 4.6E-10 102.9 14.9 120 193-336 786-935 (3956)
98 PRK05857 acyl-CoA synthetase; 98.1 3E-05 6.6E-10 83.7 13.5 64 268-335 367-446 (540)
99 PRK08008 caiC putative crotono 98.1 2.5E-05 5.5E-10 83.3 12.7 119 192-335 301-442 (517)
100 PRK06814 acylglycerophosphoeth 98.1 0.00011 2.4E-09 86.4 19.0 127 178-336 907-1055(1140)
101 PLN03102 acyl-activating enzym 98.1 2.6E-05 5.6E-10 85.2 12.6 60 273-336 390-465 (579)
102 PRK08308 acyl-CoA synthetase; 98.1 0.00014 3E-09 75.8 17.4 59 272-336 278-336 (414)
103 PRK07824 O-succinylbenzoic aci 98.1 9.6E-05 2.1E-09 75.3 15.7 44 288-336 235-278 (358)
104 PRK12316 peptide synthase; Pro 98.1 1.3E-05 2.9E-10 106.7 11.6 134 177-336 769-931 (5163)
105 PRK05691 peptide synthase; Val 98.1 4.2E-05 9.2E-10 100.9 15.9 134 177-336 1387-1550(4334)
106 PRK08279 long-chain-acyl-CoA s 98.1 3E-05 6.5E-10 84.8 12.4 147 177-336 313-484 (600)
107 PF00501 AMP-binding: AMP-bind 98.1 2.3E-05 5E-10 81.0 10.7 119 177-320 276-417 (417)
108 TIGR01923 menE O-succinylbenzo 98.1 0.00011 2.3E-09 76.5 15.6 58 274-335 291-364 (436)
109 PRK05691 peptide synthase; Val 98.0 8.8E-05 1.9E-09 98.0 17.6 133 178-336 3983-4147(4334)
110 PRK06178 acyl-CoA synthetase; 98.0 0.00015 3.2E-09 78.6 16.5 122 191-335 340-486 (567)
111 TIGR02262 benz_CoA_lig benzoat 98.0 6.1E-05 1.3E-09 80.3 12.6 119 193-336 293-429 (508)
112 COG0365 Acs Acyl-coenzyme A sy 98.0 0.00039 8.5E-09 75.4 18.5 117 193-336 305-441 (528)
113 PRK09192 acyl-CoA synthetase; 98.0 0.00028 6.1E-09 76.9 17.5 63 269-336 405-483 (579)
114 PLN02430 long-chain-fatty-acid 97.9 4.3E-05 9.2E-10 85.2 10.8 62 270-335 460-538 (660)
115 COG1022 FAA1 Long-chain acyl-C 97.9 3.2E-05 6.9E-10 85.0 9.2 130 185-355 357-506 (613)
116 PRK05620 long-chain-fatty-acid 97.9 8.2E-05 1.8E-09 81.0 12.3 44 289-336 432-475 (576)
117 PRK08180 feruloyl-CoA synthase 97.9 0.00025 5.3E-09 78.1 15.9 62 273-334 409-490 (614)
118 PRK06018 putative acyl-CoA syn 97.9 9.9E-05 2.1E-09 79.6 12.4 58 274-335 383-454 (542)
119 PTZ00216 acyl-CoA synthetase; 97.9 4.9E-05 1.1E-09 85.2 10.2 62 271-336 503-582 (700)
120 KOG1179 Very long-chain acyl-C 97.9 0.00048 1E-08 73.8 16.3 231 185-440 362-624 (649)
121 PRK08162 acyl-CoA synthetase; 97.8 0.00053 1.1E-08 73.8 16.4 59 274-336 387-461 (545)
122 PRK09029 O-succinylbenzoic aci 97.7 0.00061 1.3E-08 71.7 15.1 44 288-336 333-376 (458)
123 PRK12582 acyl-CoA synthetase; 97.7 0.00031 6.8E-09 77.5 12.4 64 271-334 419-502 (624)
124 PLN02479 acetate-CoA ligase 97.6 0.00037 8.1E-09 75.7 11.9 58 274-335 401-474 (567)
125 KOG1177 Long chain fatty acid 97.5 0.0015 3.2E-08 69.0 12.7 63 269-335 426-505 (596)
126 TIGR02372 4_coum_CoA_lig 4-cou 97.2 0.0018 3.8E-08 67.9 9.9 44 289-336 277-320 (386)
127 KOG1256 Long-chain acyl-CoA sy 97.1 0.0025 5.3E-08 70.4 9.6 136 174-335 415-572 (691)
128 PF14535 AMP-binding_C_2: AMP- 95.3 0.055 1.2E-06 45.3 6.4 81 321-418 1-84 (96)
129 COG1020 EntF Non-ribosomal pep 93.3 0.52 1.1E-05 52.0 10.6 62 269-334 561-639 (642)
130 KOG1180 Acyl-CoA synthetase [L 92.3 1.8 4E-05 47.1 12.4 141 186-357 407-574 (678)
131 PRK09188 serine/threonine prot 88.1 4.1 8.9E-05 42.5 10.7 40 288-336 210-252 (365)
132 PF04443 LuxE: Acyl-protein sy 81.2 18 0.00038 37.9 11.6 94 193-314 243-349 (365)
133 cd04880 ACT_AAAH-PDT-like ACT 57.8 69 0.0015 24.8 7.6 54 333-387 13-66 (75)
134 cd04931 ACT_PAH ACT domain of 52.3 92 0.002 25.8 7.7 56 326-387 25-80 (90)
135 KOG1178 Non-ribosomal peptide 51.1 12 0.00027 44.0 3.1 44 289-336 456-499 (1032)
136 PF07311 Dodecin: Dodecin; In 49.0 47 0.001 26.1 5.1 47 322-369 13-60 (66)
137 PRK11899 prephenate dehydratas 47.3 1.7E+02 0.0037 29.4 10.3 57 326-387 205-261 (279)
138 PTZ00189 60S ribosomal protein 44.9 14 0.00031 34.0 1.9 36 286-321 31-69 (160)
139 COG0077 PheA Prephenate dehydr 44.8 1.7E+02 0.0037 29.5 9.7 86 297-387 167-261 (279)
140 PRK11898 prephenate dehydratas 43.6 1.9E+02 0.0041 29.1 9.9 57 326-387 208-264 (283)
141 COG2139 RPL21A Ribosomal prote 43.0 17 0.00036 30.6 1.9 37 286-322 30-69 (98)
142 cd04904 ACT_AAAH ACT domain of 40.0 1.6E+02 0.0035 23.0 7.1 47 338-387 19-65 (74)
143 PLN00190 60S ribosomal protein 39.6 19 0.0004 33.2 1.8 36 286-321 31-69 (158)
144 smart00160 RanBD Ran-binding d 37.9 63 0.0014 28.5 4.9 51 268-320 10-72 (130)
145 PF11454 DUF3016: Protein of u 37.0 75 0.0016 28.8 5.2 55 270-327 47-112 (141)
146 PF01797 Y1_Tnp: Transposase I 33.1 2.1E+02 0.0045 24.0 7.3 101 309-422 8-117 (121)
147 PRK04306 50S ribosomal protein 32.3 31 0.00068 29.2 1.9 36 286-321 32-70 (98)
148 cd04905 ACT_CM-PDT C-terminal 31.7 2.5E+02 0.0054 21.9 7.9 54 333-387 15-68 (80)
149 CHL00123 rps6 ribosomal protei 31.6 2.5E+02 0.0054 23.4 7.3 46 321-366 15-67 (97)
150 PRK10622 pheA bifunctional cho 31.5 3.6E+02 0.0077 28.5 10.1 85 298-387 271-364 (386)
151 COG2026 RelE Cytotoxic transla 29.6 81 0.0018 26.0 4.0 31 276-306 43-73 (90)
152 cd03483 MutL_Trans_MLH1 MutL_T 29.2 1.1E+02 0.0024 26.6 5.1 44 293-338 30-73 (127)
153 PF09926 DUF2158: Uncharacteri 27.6 53 0.0012 24.6 2.3 19 289-310 1-19 (53)
154 COG5475 Uncharacterized small 20.3 1.2E+02 0.0027 23.0 2.9 24 289-315 5-28 (60)
No 1
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=9.4e-117 Score=942.07 Aligned_cols=456 Identities=39% Similarity=0.735 Sum_probs=431.9
Q ss_pred cchhhHHHhHHHHHhccCC-CCCCceEEEEeccCccccCCCceeeccccccccCchhhhhhhhhcccccCCcccccCCCh
Q 012409 2 ETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 80 (464)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~p-~~~gk~l~~~~~~~~~~T~~Gip~g~~s~~~~~s~~f~~~~~~~~~~~tsP~ev~~~~d~ 80 (464)
+++.+++.+..+++++++| +..||+|||+|.+.+.+|++|||+|++|+++|+|.+|+.++.++.+.||+|.+|++|+|.
T Consensus 128 ~~~~~~~~~~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~st~~y~s~~f~~~~~~~~~~~~sP~ev~~~~D~ 207 (612)
T PLN02620 128 GRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGGLVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDS 207 (612)
T ss_pred HHHHHHHHHHHHHHHhhCCCcccCcEEEEEecccCccCCCCcccccccchhhhhhhhhhcccccccceeCcHHhccCCCH
Confidence 4567789999999999999 999999999999999999999999999999999999999998899999999999999999
Q ss_pred hhhHHHHHhhhcccCCceeeEeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHhccCCCCHHHHHHHH
Q 012409 81 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIH 160 (464)
Q Consensus 81 ~~~~Y~~Ll~aL~~~~~v~~i~~~f~s~l~~~~~~l~~~weel~~dI~~Gti~~~i~~~~~R~~l~~~l~p~p~~A~~L~ 160 (464)
.|+|||||||||+++++|..++++|+++|++++++|+++|++||+||++|++++++++|++|++|+++|+|||++|+.|+
T Consensus 208 ~qs~Y~~LLcgL~~~~~v~~v~svfa~~ll~a~~~Le~~w~~L~~DI~~G~ls~~itd~~~R~av~~~L~p~pelA~~i~ 287 (612)
T PLN02620 208 YQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWTLLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVE 287 (612)
T ss_pred HHHHHHHHHHHhhcchhhceEEeechHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCHHHHHHHHhhcCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCccccCCCCceeEEEeecChHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCC
Q 012409 161 KKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNI 240 (464)
Q Consensus 161 ~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~ 240 (464)
++|.++ +|+|++++|||||++|+||+||+|++|+++|++|+||+|+++.+|+||||+||+|++|.|+++.++|+|+|++
T Consensus 288 ~~c~~~-~w~gii~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~~~p~~~sy~L~p~~ 366 (612)
T PLN02620 288 AECRKE-SWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTM 366 (612)
T ss_pred HHhccc-cccCcHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCCCCcccceeeecCCc
Confidence 999996 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeCCCCCcccc----------cccCCCcccccccccCCCeEEEEecccCceeeeeeCCEEEEecccCCCcEEEEE
Q 012409 241 GYFEFIPQRLGNLESQ----------VLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFI 310 (464)
Q Consensus 241 ~ffEFip~~~~~~~~~----------~~~~~~~~l~l~eve~G~~YelVvTt~~GLyRYr~GDvV~v~gf~~~~P~i~f~ 310 (464)
+||||||+++ .+.. +..+++++|+++|||+|++|||||||++||||||+||||+|+||||++|+|+|+
T Consensus 367 ~yFEFip~~~--~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv 444 (612)
T PLN02620 367 AYFEFLPVHR--NNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFI 444 (612)
T ss_pred EEEEEeeccC--cccccccccccccccccccCccccHHHccCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEE
Confidence 9999999883 2110 012356799999999999999999999999999999999999999999999999
Q ss_pred eecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEec--CC--CChHHHHHHHHHHH
Q 012409 311 CRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVS--GE--VNDEVLKECCNCLD 386 (464)
Q Consensus 311 gR~~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~--~~--~~~~~l~~~~~~ld 386 (464)
||.+.++|++|||++|++|+.||.+|..+|...+++|+||+++++.++.||||++|||+. ++ ++++++++||..||
T Consensus 445 ~R~~~~lsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~dyts~~d~~~~PghYvl~~El~~~~~~~~~~~~l~~cc~~lE 524 (612)
T PLN02620 445 CRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSYADTSTIPGHYVLFWELCLNGSTPIPPSVFEDCCLTIE 524 (612)
T ss_pred eecCceeecccccCCHHHHHHHHHHHHHhhcccCceeeeEEeccccCCCCCceEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999888777999999999999889999999999983 32 46678999999999
Q ss_pred hhccCcchHhhhhcC-ccCCeEEEEeccchHHHHHHHHhcCCCCCCCCCcCcccCCCCHhHHHHHhccccccccccCC
Q 012409 387 RSFVDAGYVSARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFSTAY 463 (464)
Q Consensus 387 ~~l~n~~Y~~~R~~g-~l~pl~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~v~~~~~s~~~ 463 (464)
++| |++|+.+|..+ +|||++|++|++|||+++|++++++|++.+|||+|||++ +.+++++|+++|+++|||+++
T Consensus 525 ~~L-n~~Yr~~R~~~~sIgPLeirvv~~GtF~~l~~~~~~~G~s~~QyK~Pr~v~--~~~~~~~l~~~v~~~~~s~~~ 599 (612)
T PLN02620 525 ESL-NSVYRQGRVSDKSIGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVK--FAPIIELLNSRVVSNYFSPKC 599 (612)
T ss_pred HHh-CHHHHHHHhcCCcCCCcEEEEeCCChHHHHHHHHHHcCCccccccCceEec--CHHHHHHHHhhhheeeccccC
Confidence 996 99999999886 599999999999999999999999999999999999999 999999999999999999975
No 2
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=6e-115 Score=929.99 Aligned_cols=456 Identities=40% Similarity=0.727 Sum_probs=429.7
Q ss_pred cchhhHHHhHHHHHhccCC-CCCCceEEEEeccCccccCCCceeeccccccccCchhhhhhhhhcccccCCcccccCCCh
Q 012409 2 ETTLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDF 80 (464)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~p-~~~gk~l~~~~~~~~~~T~~Gip~g~~s~~~~~s~~f~~~~~~~~~~~tsP~ev~~~~d~ 80 (464)
+++.+++++..+++++++| +.+||+|||+|.+.+.+|++|||+|++++.+++|.+|+.++.++.+.||+|.+|++|+|.
T Consensus 116 ~~~~~~~~l~~~~~~~~~p~l~~Gk~~~~~~~~~~~~T~~Gip~g~~~t~y~~s~~f~~~~~~~~~~~~sP~ev~~~~D~ 195 (606)
T PLN02247 116 DRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSGLMARPVLTSYYKSSNFRNRPFNRYNVYTSPDETILCQDS 195 (606)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCcEEEEEecCcCccCCCCcccccccchhhccccccccccccccceeCcHHhhcCCCH
Confidence 4567889999999999988 999999999999999999999999999999999999999988878899999999999999
Q ss_pred hhhHHHHHhhhcccCCceeeEeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHhccC-CCCHHHHHHH
Q 012409 81 HQSLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLI 159 (464)
Q Consensus 81 ~~~~Y~~Ll~aL~~~~~v~~i~~~f~s~l~~~~~~l~~~weel~~dI~~Gti~~~i~~~~~R~~l~~~l-~p~p~~A~~L 159 (464)
+|+|||||||||++++++..++++|++++++++++||++|++||+||++|++++++++|++|+++.+.+ +|||++|++|
T Consensus 196 ~qs~Y~~LLcgL~~~~~vl~v~svfa~s~l~a~~~Le~~we~L~~DI~~G~ls~~it~p~~R~a~~~~l~~p~peLA~~l 275 (606)
T PLN02247 196 KQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWKELCSNIRTGCVSDWITDPSCRNAVSSILSKPNSELADLI 275 (606)
T ss_pred HHHHHHHHHHHhhccccccEEEEeccHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCHHHHHHHhhcccCCCHHHHHHH
Confidence 999999999999999899999999999999999999999999999999999999999999999999999 6999999999
Q ss_pred HHHhcCCCCCCCCccccCCCCceeEEEeecChHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCC
Q 012409 160 HKKCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPN 239 (464)
Q Consensus 160 ~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~ 239 (464)
+++|.++ ||+|++++|||||++|+||+||+|++|+++|++|+||+|+++.+|+||||+||+|++|.|+++.++|+|+|+
T Consensus 276 ~~~c~~~-~w~gi~~rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~p~~~sy~L~p~ 354 (606)
T PLN02247 276 ESECSGK-SWEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSDPSDVSYTLLPN 354 (606)
T ss_pred HHHhccc-CccccHHHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCCccCCceeecCC
Confidence 9999996 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEeCCCCCcccc----------c-----ccCCCcccccccccCCCeEEEEecccCceeeeeeCCEEEEecccCCC
Q 012409 240 IGYFEFIPQRLGNLESQ----------V-----LCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNST 304 (464)
Q Consensus 240 ~~ffEFip~~~~~~~~~----------~-----~~~~~~~l~l~eve~G~~YelVvTt~~GLyRYr~GDvV~v~gf~~~~ 304 (464)
++||||||+++ .+.+ + ..+++++|+++|||+|++|||||||++||||||+||||+|+||||++
T Consensus 355 ~~yFEFip~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~GLYRYrlGDvv~V~GF~n~~ 432 (606)
T PLN02247 355 MAYFEFLPVDK--NNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNA 432 (606)
T ss_pred cEEEEEeecCC--CcccccccccccccccccccccccCceecHHHccCCCeEEEEEEecCceEEEecCCEEEEeeecCCC
Confidence 99999999883 2110 0 01245699999999999999999999999999999999999999999
Q ss_pred cEEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecC-------CCChHH
Q 012409 305 PELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSG-------EVNDEV 377 (464)
Q Consensus 305 P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~-------~~~~~~ 377 (464)
|+|+|+||.+.++|++|||++|++++.||.+|..++++.++.++||+++++.++.||||++|||+.. +.+..+
T Consensus 433 P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~~~l~~~~~~l~d~ts~~d~~~~PghYvlf~El~~~~~~~~~~~~~~~ 512 (606)
T PLN02247 433 PQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFLLTEYTSYADTSSIPGHYVLFWELKTRGSNDPPELDPKI 512 (606)
T ss_pred ceEEEEecCCceeecccccCCHHHHHHHHHHHHHhhcccCeeeeeeecccccCCCCCceEEEEEeecCCCCccccchHHH
Confidence 9999999999999999999999999999999988777778999999999998889999999999952 134568
Q ss_pred HHHHHHHHHhhccCcchHhhhhc-CccCCeEEEEeccchHHHHHHHHhcCCCCCCCCCcCcccCCCCHhHHHHHhccccc
Q 012409 378 LKECCNCLDRSFVDAGYVSARKV-NAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGK 456 (464)
Q Consensus 378 l~~~~~~ld~~l~n~~Y~~~R~~-g~l~pl~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~v~~ 456 (464)
+++||..||++| |++|+.+|.. |+|||++|++|++|||+++|++++++|++.+|||+|||++ +.+++++|+++|++
T Consensus 513 l~~cc~~lE~~L-n~~Yr~~R~~~~~igPLeirvv~~GtF~~l~~~~~~~G~s~~Q~K~Pr~v~--~~~~~~~l~~~v~~ 589 (606)
T PLN02247 513 MEQCCSTVEESL-DSVYRRCRKRDKSIGPLEIRVVKHGTFDALMDFCVSQGSSVNQYKTPRCIK--SEEALKILDSRVIG 589 (606)
T ss_pred HHHHHHHHHHHh-hHHHHHHhhccCcCCCcEEEEeCCChHHHHHHHHHHcCCCcccccCceEec--CHHHHHHHHhhhhe
Confidence 999999999996 9999999998 5999999999999999999999999999999999999999 99999999999999
Q ss_pred cccccCC
Q 012409 457 SYFSTAY 463 (464)
Q Consensus 457 ~~~s~~~ 463 (464)
+|||+++
T Consensus 590 ~~~s~~~ 596 (606)
T PLN02247 590 RFFSKRV 596 (606)
T ss_pred eeccccC
Confidence 9999975
No 3
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=100.00 E-value=5.6e-104 Score=851.52 Aligned_cols=451 Identities=41% Similarity=0.742 Sum_probs=420.0
Q ss_pred hhhHHHhHHHHHhccCC-CCCCceEEEEeccCccccCCCceeeccccccccCchhhhhhhhhcccccCCcccccCCChhh
Q 012409 4 TLQIFRTSYAFRNREFP-IGKGKALQFIYGSKQSKTKGGLNAGTATTNVYRSSTFKAEMKAMQSQCCSPDEVIFGPDFHQ 82 (464)
Q Consensus 4 ~~~~~~~~~~~~~~~~p-~~~gk~l~~~~~~~~~~T~~Gip~g~~s~~~~~s~~f~~~~~~~~~~~tsP~ev~~~~d~~~ 82 (464)
..+...+...+.++.+| +..||.||++|++.+.+|+||+|+|++++.+++|.+|+++.. .+.||+|.++++++|.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~l~~Gk~l~~~~~~~~~~t~gG~p~~~~~~~~~~~~~f~~~~~--~~~~~~P~ev~~~~D~~~ 206 (597)
T PLN02249 129 RQLLGSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLPARPALTSYYKSDHFRTSDY--DNVYTSPNEAILCSDSSQ 206 (597)
T ss_pred HHHHHHHHHHHHhccCCccccCcEEEEEeccccccCCCCCccCccccccccccccccccc--cccccCcHHhhcCCCHHH
Confidence 35556666777777788 889999999999999999999999999999889988887654 779999999999999999
Q ss_pred hHHHHHhhhcccCCceeeEeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHhccC-CCCHHHHHHHHH
Q 012409 83 SLYCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKIL-KPNPELADLIHK 161 (464)
Q Consensus 83 ~~Y~~Ll~aL~~~~~v~~i~~~f~s~l~~~~~~l~~~weel~~dI~~Gti~~~i~~~~~R~~l~~~l-~p~p~~A~~L~~ 161 (464)
+|||||||||++++++..|++.||+.+++++++|+++|++||+||++|+++.++++|++|++|..++ .|+|++|++|++
T Consensus 207 ~~Y~~lL~gL~~~~~~~~i~~~~Ps~l~~~~~~l~~~weel~~dI~~g~~~~~~~~~~~~~~v~~i~g~P~~~la~~i~~ 286 (597)
T PLN02249 207 SMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKELAQDISTGTLSSKIFDPAIKNRMSKILNKPDQELAEFLIG 286 (597)
T ss_pred HHHHHHHHHHhhccccceEEEECcHHHHHHHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHhhcCCCCHHHHHHHHH
Confidence 9999999999999899999999999999999999999999999999999999999999999999998 699999999999
Q ss_pred HhcCCCCCCCCccccCCCCceeEEEeecChHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCCc
Q 012409 162 KCSGLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIG 241 (464)
Q Consensus 162 ~~~~~~~~~~~~~~lWP~l~~i~~~~tG~~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ 241 (464)
+|++. +|+|++++|||||++|+||+||+|++|+++|++|+|++++++++|+||||+||+|+++.|+++.++|+|+||++
T Consensus 287 ~~~~~-~~~gii~~lWPnl~~i~~~~~G~~~~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~~~~p~~~~~~l~~~~~ 365 (597)
T PLN02249 287 VCSQE-NWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYSGGLPMASTIYASSESYFGINLNPMCKPSEVSYTIMPNMA 365 (597)
T ss_pred Hhccc-cccccHHHhCCCCCeEEEEecCChHHHHHHHHHHcCCCccccccccccceEEEeecCCCCCCCCcceEecCCcE
Confidence 99986 79999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred eeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEecccCceeeeeeCCEEEEecccCCCcEEEEEeecCceeeeee
Q 012409 242 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINI 321 (464)
Q Consensus 242 ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~GLyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~G 321 (464)
||||||.+ +.+++ ..+++++|+++|||+|++|||||||++|||||++||+|||+||||++|+|+|+||+++++|++|
T Consensus 366 ffEFiP~~--~~~~~-~~~~~~~v~l~eVe~G~~Y~lVvTT~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~G 442 (597)
T PLN02249 366 YFEFLPHN--HDGDG-ALDETSLVELADVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIES 442 (597)
T ss_pred EEEeeecc--cCCcc-cCCCCcEecHHHcCCCCeEEEEEEcccceeEeecCCEEEEeeccCCCcEEEEEccCCcceeccc
Confidence 99999988 33220 1125789999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEec-C-----CCChHHHHHHHHHHHhhccCcchH
Q 012409 322 DKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVS-G-----EVNDEVLKECCNCLDRSFVDAGYV 395 (464)
Q Consensus 322 Ekv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~-~-----~~~~~~l~~~~~~ld~~l~n~~Y~ 395 (464)
||++|++++.||.+|..++++.++.|.||+++++.++.|+||++|||+. . ..+.+.+++||..+++++ |.+|+
T Consensus 443 EKl~e~~v~~Av~~a~~~~~~~~~~v~eft~~~~~~~~p~Hyvl~wei~~~~~~~~~~~~~~~~~~~~~~e~~l-n~~Y~ 521 (597)
T PLN02249 443 DKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVIYWELLGRDQSNALPSDEVMAKCCLEMEESL-NSVYR 521 (597)
T ss_pred ccCCHHHHHHHHHHHHHHhhhcCceEEEeEEecCCCCCCCceEEEEEEeccccccCCCCHHHHHHHHHHHHHHh-CHHHH
Confidence 9999999999999998888788999999999998877899999999993 2 145678889999999995 99999
Q ss_pred hhhhcC-ccCCeEEEEeccchHHHHHHHHhcCCCCCCCCCcCcccCCCCHhHHHHHhccccccccccCC
Q 012409 396 SARKVN-AIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCNNIGKSYFSTAY 463 (464)
Q Consensus 396 ~~R~~g-~l~pl~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~~v~~~~~s~~~ 463 (464)
++|..+ +|+||+|++|++|+|++||++++++|++.||||+|||++ +.+++++|+++|+++|||+++
T Consensus 522 ~~R~~~~~L~pl~v~vv~~GtF~~~~~~~~~~G~~~gQ~K~Prl~~--~~~~~~~l~~~~~~~~~~~~~ 588 (597)
T PLN02249 522 QSRVSDKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRCVS--LTPIMELLDSRVVSAHFSPSL 588 (597)
T ss_pred HHHhcCCccCCeEEEEeCCchHHHHHHHHHhCCCcCCCcCCceEeC--CHHHHHHHHhhhheeeccccC
Confidence 999885 999999999999999999999999999999999999999 999999999999999999975
No 4
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=100.00 E-value=4.3e-91 Score=748.38 Aligned_cols=400 Identities=38% Similarity=0.683 Sum_probs=313.6
Q ss_pred HHHHHhccCC-C-CCCc--eEEEEeccCccccCCCceeecccccccc--CchhhhhhhhhcccccCCcccccCCChhhhH
Q 012409 11 SYAFRNREFP-I-GKGK--ALQFIYGSKQSKTKGGLNAGTATTNVYR--SSTFKAEMKAMQSQCCSPDEVIFGPDFHQSL 84 (464)
Q Consensus 11 ~~~~~~~~~p-~-~~gk--~l~~~~~~~~~~T~~Gip~g~~s~~~~~--s~~f~~~~~~~~~~~tsP~ev~~~~d~~~~~ 84 (464)
....+++++| . ..|| .+.+.+++...+|++|+|+|++|+.+++ +..|+ ..|++|.+++.+.|..+++
T Consensus 118 ~~~~l~~~~p~~~~~gk~~~l~~~~~~~~~~t~~Gi~~g~~s~~~~~~~~~~~~-------~~~~~P~~~~~~~~~~~~~ 190 (528)
T PF03321_consen 118 WLYYLYRNFPGLLFQGKSLYLSFSFAPPPLRTPGGIPIGSISGIPYRMIPPWFR-------SWFTSPSEVIAAIDDWEAK 190 (528)
T ss_dssp HH--HHHHSSS--TTSE--EEEE------EE-TTS-EEE-HHHHHHT--SCCHH-------G-BSS-HHHHT-S-HHHHH
T ss_pred HHHHHHhcCcccccCCcceEEEeecCCCcccCCCCeEEecccccchhhChHHHc-------cCccCCHHHHhcccHHHHH
Confidence 3344788999 5 5799 6666677999999999999999999887 33333 5899999999999999999
Q ss_pred HHHHhhhcccCCceeeEeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHHHhccCCCCHHHHHHHHHHhc
Q 012409 85 YCHLLCGLIFREEIQLVFSTFAHSLVHAFRTFELVWEELCDDIREGVLSSRITVPSIRAAMSKILKPNPELADLIHKKCS 164 (464)
Q Consensus 85 Y~~Ll~aL~~~~~v~~i~~~f~s~l~~~~~~l~~~weel~~dI~~Gti~~~i~~~~~R~~l~~~l~p~p~~A~~L~~~~~ 164 (464)
||||||+|+++++|+.|+++||++|+.++++|+++|++||+||++|+++ .++|||+||++|+++|.
T Consensus 191 y~~ll~~l~~~~~l~~i~~~~p~~l~~~~~~le~~~~~l~~dI~~G~~~--------------~~~p~p~rA~~L~~~~~ 256 (528)
T PF03321_consen 191 YCHLLCALLQDRDLRMISGWFPSFLLLLFRLLEKHWEELVEDIRDGTLS--------------LLRPNPERAAELRAEFE 256 (528)
T ss_dssp HHHHHHHHHCGGGEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS----------------C-S--HHHHHHHHHHHC
T ss_pred HHHHHHHhhcccCcCEEEeeCHHHHHHHHHHHHHhhhHhhHHhcCCccc--------------cCCCCHHHHHHHHHhhc
Confidence 9999999997789999999999999999999999999999999999998 46799999999999999
Q ss_pred CCCCCCCCccccCCCCceeEEEeecChHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCCceeE
Q 012409 165 GLSNWYGLIPELFPNAKYLSGIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFE 244 (464)
Q Consensus 165 ~~~~~~~~~~~lWP~l~~i~~~~tG~~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ffE 244 (464)
++ .+++++|||||++|+||++|+|++|+++|++|+|++++++.+|+||||+||+|+++. ..+|+++|+++|||
T Consensus 257 ~~---~~~~~~lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~~~~----~~~~~l~~~~~ffE 329 (528)
T PF03321_consen 257 KG---RGIPKRLWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPLDPE----DPGYVLAPDSGFFE 329 (528)
T ss_dssp CS---TTHHHHHSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES-CC----C--EEE-TTSSEEE
T ss_pred cc---CCCHHHhCCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEecCCC----CCceEeecCCeEEE
Confidence 84 689999999999999999999999999999999999999999999999999999844 56799999999999
Q ss_pred EEeCCCCCcccccccCCCcccccccccCCCeEEEEecccCceeeeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeec
Q 012409 245 FIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKN 324 (464)
Q Consensus 245 Fip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~GLyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv 324 (464)
|||++ +.+.+ ..+++++++++|||+|++|||||||.+||||||+||||||+||+|++|+|+|+||.++++|++|||+
T Consensus 330 Fip~~--~~~~~-~~~~~~~l~~~ele~G~~YelviTt~~GLyRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl 406 (528)
T PF03321_consen 330 FIPVD--EDEQN-PSEQPKTLLLHELEVGEEYELVITTNSGLYRYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKL 406 (528)
T ss_dssp EEE-S--TT--------SSSEEGGG--TT-EEEEEEESTTS-SSEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--E
T ss_pred EEecc--CCccc-ccCCCceecHHHhcCCCeEEEEEecccceeeeecCCEEEEeeccCCCcEEEEeccCCceeecceeec
Confidence 99998 33310 1136899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhhcCceEEeEEEeec-CCCCCceEEEEEEecCCCChHHHHHHHHHHHhhc--cCcchHhhhhc-
Q 012409 325 TEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSF--VDAGYVSARKV- 400 (464)
Q Consensus 325 ~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~-~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~~l--~n~~Y~~~R~~- 400 (464)
+|++|++||.++. ++.|+.+.+|++.++ .++.||||++|||+... .+.++.|++.||++| .|++|+.+|+.
T Consensus 407 ~e~~v~~av~~~~---~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~--~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~ 481 (528)
T PF03321_consen 407 SEEQVQEAVARAL---QETGLELRDFTVAPDPSSGNPPHYVLFWELEGE--PDDLEELAKALDESLQELNPHYRRARESD 481 (528)
T ss_dssp EHHHHHHHHHHHH---HCTT-EEEEEEEEEE--SSSSBEEEEEEEECS---HHHHHHHHHHHHHCS----HHHHHHHHTS
T ss_pred CHHHHHHHHHHHH---HhcCCceeeEEEEeecccCCCCceEEEEEeCCC--chHHHHHHHHHHHHhhhCCchHHHHHhhc
Confidence 9999999999884 478999999999998 67899999999999765 446889999999986 49999999999
Q ss_pred CccCCeEEEEeccchHHHHHHHHhcC-CCCCCCCCcCcccCCCCHhHHH
Q 012409 401 NAIGPLELRVVLKGTFQQILDHYLGL-GAALSQFKTPRCVGPTNKTVLQ 448 (464)
Q Consensus 401 g~l~pl~v~~v~~GtF~~~~~~~~~~-G~~~~Q~K~Pr~~~~~~~~~~~ 448 (464)
|+|+|++|++|++|+|++|+++++++ |++.+|||+|||++ ++++.+
T Consensus 482 g~L~p~~v~~v~~g~f~~~~~~~~~~~G~~~~Q~K~pr~~~--~~~~~~ 528 (528)
T PF03321_consen 482 GQLGPPRVHIVRPGTFDALMERAVARLGGSAGQYKVPRLIR--DREFVE 528 (528)
T ss_dssp TSC---EEEEE-TTHHHHHHHHHHCT-T--SSS----SS----TCHHHH
T ss_pred CCcCCcEEEEeCcchHHHHHHHHhhcCCCCccceeCccccC--ccccCC
Confidence 99999999999999999999999999 99999999999999 888743
No 5
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.66 E-value=4.8e-15 Score=154.17 Aligned_cols=232 Identities=17% Similarity=0.191 Sum_probs=164.2
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeec--ChHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCc
Q 012409 152 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG--SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP 229 (464)
Q Consensus 152 ~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG--~~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~ 229 (464)
.|+.+..|.+...+. | ....++ ++| ..+.+| -.+..++.+++.+ |++.+ +.||+||+++.- ...|..
T Consensus 189 tps~~l~lae~~~~~-G--~~~~~~--~lk--~~i~gaE~~see~R~~ie~~~-g~~~~-diYGltE~~g~g--~~eC~~ 257 (438)
T COG1541 189 TPSYLLYLAEEAEEE-G--IDPDKL--SLK--KGIFGAEPWSEEMRKVIENRF-GCKAF-DIYGLTEGFGPG--AGECTE 257 (438)
T ss_pred ChHHHHHHHHHHHHc-C--CChhhc--cee--EEEEecccCCHHHHHHHHHHh-CCcee-eccccccccCCc--cccccc
Confidence 488888888888775 3 234466 666 344444 3678889999999 88888 999999995531 235544
Q ss_pred ccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEeccc--Cc--eeeeeeCCEEEEecccCCC-
Q 012409 230 ELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV--AG--LYRYRLGDVVKVMGFHNST- 304 (464)
Q Consensus 230 ~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~--~G--LyRYr~GDvV~v~gf~~~~- 304 (464)
..++|++.|..|+|.++++. + ..|..|+.||||+||+ .| |.|||+||++++....|.|
T Consensus 258 -~~glhi~eD~~~~Ei~dP~t-----------~-----e~l~dge~GelV~T~L~~~~~PlIRYrtgDit~i~~~~C~cG 320 (438)
T COG1541 258 -RNGLHIWEDHFIFEIVDPET-----------G-----EQLPDGERGELVITTLTKEGMPLIRYRTGDITVILSDPCGCG 320 (438)
T ss_pred -ccCCCcchhhceeeeecCCc-----------C-----ccCCCCCeeEEEEEeccccCcceEEEEcCCeeEecccCCCCC
Confidence 34788888999999998772 2 2367999999999998 33 9999999999999865543
Q ss_pred ---cEE-EEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEE-eEEEeecCCCCCceEEEEEEecCCC-ChHHH
Q 012409 305 ---PEL-KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVV-DFTSHVDLSTDPGHYVIFWEVSGEV-NDEVL 378 (464)
Q Consensus 305 ---P~i-~f~gR~~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~-~f~~~~~~~~~p~hY~~~~E~~~~~-~~~~l 378 (464)
|+| ++.||.+||+.+.|.++.+.+|+.++.+... +. +|.+.......-.+-+|-+|...+. .....
T Consensus 321 r~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~--------~~~~yqi~~~~~~~~d~L~V~vE~~~~~~~~~~~ 392 (438)
T COG1541 321 RTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE--------VTPHYQIILTRNGGLDELTVRVELENEAEELEDE 392 (438)
T ss_pred CccccccccCcccccEEEECCEEeCHHHHHHHHhcccC--------CCceEEEEEecCCCCceEEEEEEecCcccchHHH
Confidence 454 5999999999999999999999999986522 22 7887766533344667888875431 11112
Q ss_pred HHHHHHHHhhccCcchHhhhhcCccCCeEEEEeccchHHHHHHHHhcCCCCCCCCCcCcccC
Q 012409 379 KECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVG 440 (464)
Q Consensus 379 ~~~~~~ld~~l~n~~Y~~~R~~g~l~pl~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~ 440 (464)
++++..+...+ ..--..+++|.+|.+|+.++.. | |.+|++.
T Consensus 393 ~~~~~~l~~~~---------~~~~~~~~~v~~v~~g~l~r~~------~------K~krvvd 433 (438)
T COG1541 393 RRLAKKLIKNI---------KSELGVRVEVELVEPGELPRTE------G------KAKRVVD 433 (438)
T ss_pred HHHHHHHHHHH---------HhhcCCceEEEEEeccceeccc------C------ceeEEEE
Confidence 22333333321 2222678999999999977432 2 7777765
No 6
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.63 E-value=9.6e-15 Score=154.68 Aligned_cols=229 Identities=12% Similarity=0.085 Sum_probs=142.2
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCc
Q 012409 152 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP 229 (464)
Q Consensus 152 ~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~ 229 (464)
.|..+..|.+.+.+. | +-.. .++++ ..+.+|. ....++.+++.+ |++++ +.||+||+.++. .|..
T Consensus 183 ~ps~ll~La~~~~~~-g---~~~~-~~~lr--~ii~gGE~l~~~~r~~ie~~~-g~~v~-~~YG~TE~~~~~----~c~~ 249 (445)
T TIGR03335 183 SVFKLLRLARRMKAE-G---IDPA-ESSIR--RLVVGGESFADESRNYVEELW-GCEVY-NTYGSTEGTMCG----ECQA 249 (445)
T ss_pred CHHHHHHHHHHHHHc-C---CCcc-cCcce--EEEEcCCCCCHHHHHHHHHHh-CCcEE-ecCChhhhhheE----EecC
Confidence 455555555544442 2 2111 34677 3334442 335567888888 79999 899999974332 3322
Q ss_pred ccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEecccC------c--eeeeeeCCEEEEe-cc
Q 012409 230 ELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA------G--LYRYRLGDVVKVM-GF 300 (464)
Q Consensus 230 ~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~------G--LyRYr~GDvV~v~-gf 300 (464)
..+|++.++..+.|+++++ . .+ .|++|+.+|||+||+. | |.||||||++++. .-
T Consensus 250 -~~g~h~~~d~~~vEIvDp~---~--------~~-----~vp~Ge~GELvvT~L~~~~~r~~~PliRYrtgD~~~~~~~~ 312 (445)
T TIGR03335 250 -VAGLHVPEDLVHLDVYDPR---H--------QR-----FLPDGECGRIVLTTLLKPGERCGSLLINYDTEDTTVVISRD 312 (445)
T ss_pred -CCCccccCCceEEEEEcCC---C--------CC-----CCcCCCceEEEEEecCCCCccCCceEEEeecCceEEEecCC
Confidence 3568887778899999765 1 21 2578999999999983 3 8999999999974 34
Q ss_pred cCC----CcEEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEE-eEEEeecCCC-CCceEEEEEEecCCCC
Q 012409 301 HNS----TPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVV-DFTSHVDLST-DPGHYVIFWEVSGEVN 374 (464)
Q Consensus 301 ~~~----~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~-~f~~~~~~~~-~p~hY~~~~E~~~~~~ 374 (464)
.|. .|++..+||.+||+.++|.++++.+|+++|.+.... ..+. +|.+..+... ....-.|-+|......
T Consensus 313 ~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~e~~~~~~ 387 (445)
T TIGR03335 313 RCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENM-----DSLTGEYEAFLYGEEEGEITLRVSLECEDKDN 387 (445)
T ss_pred CCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCC-----CCCCccEEEEEecCCCCCceEEEEEEecCccc
Confidence 443 377877899999999999999999999999853100 1222 6777665321 1124446667643221
Q ss_pred hHHHHHHHHHHHhhccCcchHhhh---hcCccCCeEEEEeccchHHH
Q 012409 375 DEVLKECCNCLDRSFVDAGYVSAR---KVNAIGPLELRVVLKGTFQQ 418 (464)
Q Consensus 375 ~~~l~~~~~~ld~~l~n~~Y~~~R---~~g~l~pl~v~~v~~GtF~~ 418 (464)
...+++.+.+.+++ ...++..+ ..+ .-.++|.++++|++++
T Consensus 388 -~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 431 (445)
T TIGR03335 388 -CSIHDIQENFTGTF-LKYKPELIGSYDEG-IFQILVNFTGPGELEL 431 (445)
T ss_pred -chHHHHHHHHHHHH-hhhhhhhhhhhhcc-eEEEEEEEeCCCCccc
Confidence 11333433444331 11122111 122 3446899999999874
No 7
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.42 E-value=1.1e-11 Score=129.88 Aligned_cols=224 Identities=13% Similarity=0.157 Sum_probs=136.1
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccce-eeecCCCCCC
Q 012409 152 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGW-IGANVNPSLP 228 (464)
Q Consensus 152 ~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~-~gi~~~~~~~ 228 (464)
.|..+..|.+...+. +. .... +.++ .++.+|. ....++.+++.+ |++++ +.||+||+. .++.. .|.
T Consensus 174 ~Ps~l~~L~~~~~~~-~~--~~~~--~~lr--~i~~~ge~l~~~~~~~i~~~~-g~~v~-~~YG~tE~~~~~~~~--~~~ 242 (422)
T TIGR02155 174 TPSYMLNLLEELKRM-GI--DPAQ--TSLQ--VGIFGAEPWTNAMRKEIEARL-GMKAT-DIYGLSEVIGPGVAM--ECV 242 (422)
T ss_pred cHHHHHHHHHHHHHc-CC--Cccc--CceE--EEEEeCCcCCHHHHHHHHHHh-CCceE-ecccchhhcCCceee--ccc
Confidence 366666665544332 21 1111 2555 3344442 446677888888 68888 899999973 12211 222
Q ss_pred cccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEecccCc----eeeeeeCCEEEEecccC-C
Q 012409 229 PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAG----LYRYRLGDVVKVMGFHN-S 303 (464)
Q Consensus 229 ~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~G----LyRYr~GDvV~v~gf~~-~ 303 (464)
....++++..+..+.|.++++ + + .+|.+|+.+|||+|+... +.||++||++++..-.+ +
T Consensus 243 ~~~~g~~~~~~~~~~eivd~~---~--------g-----~~v~~Ge~Gelvvt~~~~~~~p~~ry~TGDl~~~~~~~Gr~ 306 (422)
T TIGR02155 243 ETQDGLHIWEDHFYPEIIDPH---T--------G-----EVLPDGEEGELVFTTLTKEALPVIRYRTRDLTRLLPGTART 306 (422)
T ss_pred ccCCCceEecCeeEEEEECCC---C--------C-----CCCCCCCeeEEEEecCCccccceeeEEcCcEEEEECCCCCc
Confidence 123456666666788988754 1 2 235689999999997532 67999999999875211 2
Q ss_pred CcEE-EEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCC----ChHHH
Q 012409 304 TPEL-KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEV----NDEVL 378 (464)
Q Consensus 304 ~P~i-~f~gR~~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~----~~~~l 378 (464)
.|++ .|+||.+|++++.|+++++.+|+.++.+.. ++. ..|.+..+..+.+-..++.+|...+. ..+..
T Consensus 307 ~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~------~v~-~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 379 (422)
T TIGR02155 307 MRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMD------ELS-PHYQLELTRNGHMDELTLKVELKPESYTLRLHEQA 379 (422)
T ss_pred ccccccccCccCCeEEECCEEECHHHHHHHHHhCc------CcC-CCEEEEEEcCCCccEEEEEEEEecCcccccchHHH
Confidence 3544 799999999999999999999999987531 221 14555544322223566778875321 11222
Q ss_pred HHHHHHHHhhccCcchHhhhhcCccCCeEEEEeccchHHH
Q 012409 379 KECCNCLDRSFVDAGYVSARKVNAIGPLELRVVLKGTFQQ 418 (464)
Q Consensus 379 ~~~~~~ld~~l~n~~Y~~~R~~g~l~pl~v~~v~~GtF~~ 418 (464)
+.++++|.+.+ |+...+ .++|.++.+|++.+
T Consensus 380 ~~~~~~i~~~~--------~~~~~~-~~~v~~~~~~~lp~ 410 (422)
T TIGR02155 380 SLLAGEIQHTI--------KQEVGV-SMDVHLVEPGSLPR 410 (422)
T ss_pred HHHHHHHHHHH--------HhccCc-EEEEEEECCCCccC
Confidence 33344444432 322112 35799999999863
No 8
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.35 E-value=4e-11 Score=126.49 Aligned_cols=168 Identities=13% Similarity=0.125 Sum_probs=114.7
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeec--ChHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCc
Q 012409 152 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTG--SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP 229 (464)
Q Consensus 152 ~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG--~~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~ 229 (464)
.|+.+.+|.+...++ ++ ++ +++ ..+.+| -....++.|++.| |++++ +.||+|||+++. .|.
T Consensus 194 ~pS~l~~LA~~~~~~----~l--~~--~~k--~ii~~~E~l~~~~r~~Ie~~f-g~~V~-~~YG~tEg~la~----eC~- 256 (430)
T TIGR02304 194 PPSVLRALALEVMEG----EL--TI--KPK--KVISVAEVLEPQDRELIRNVF-KNTVH-QIYQATEGFLAS----TCR- 256 (430)
T ss_pred cHHHHHHHHHHHHhc----CC--CC--Cce--EEEEccCCCCHHHHHHHHHHh-CCCee-EccCCchhheEE----ecC-
Confidence 477777777766654 22 23 445 344444 2445667889999 79998 899999987764 443
Q ss_pred ccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEecccCc----eeeeeeCCEEEEecccCCC-
Q 012409 230 ELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVAG----LYRYRLGDVVKVMGFHNST- 304 (464)
Q Consensus 230 ~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~G----LyRYr~GDvV~v~gf~~~~- 304 (464)
..+||+.++..|+|+..+|+ . + .+++|+|++.. |.||++||++++.+-.|.|
T Consensus 257 -~g~lHl~ed~~~vE~~ivD~--~--------~------------~~~~ViT~L~n~~~PlIRYrtGD~~~~~~~~C~CG 313 (430)
T TIGR02304 257 -CGTLHLNEDLVHIEKQYLDE--H--------K------------RFVPIITDFTRTTQPIVRYRLNDILVESEQPCSCG 313 (430)
T ss_pred -CCCEEEccccEEEEeeEECC--C--------C------------ceEEEEecCCCccceEEeeeCCCEEEeCCCCCCCC
Confidence 34699999999999533331 1 1 13359999854 9999999999987666543
Q ss_pred ---cEEE-EEeecCceeee---eeee--cCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEe
Q 012409 305 ---PELK-FICRRNLLLTI---NIDK--NTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEV 369 (464)
Q Consensus 305 ---P~i~-f~gR~~~~l~v---~GEk--v~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~ 369 (464)
|+|+ +.||.+|++.+ .|.+ +++..+..++..... .+.+|.+... .+++.++.+..
T Consensus 314 r~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~-------~i~~yQi~Q~---~~~~l~v~~~~ 377 (430)
T TIGR02304 314 SATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLP-------LIVEYRVLQT---GSAQLELIADC 377 (430)
T ss_pred CcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCC-------CCceEEEEEc---cCCeEEEEEEe
Confidence 6774 99999999976 3444 588878777653322 3568887755 46677776653
No 9
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.91 E-value=2.4e-09 Score=109.19 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=97.7
Q ss_pred EEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCC----CceeEEEeCCCCCccccc
Q 012409 185 GIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPN----IGYFEFIPQRLGNLESQV 257 (464)
Q Consensus 185 ~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~----~~ffEFip~~~~~~~~~~ 257 (464)
.+.-|+ ...-+++++.-+ |..++ ..+|+.||.+.+..= ++|.+. .+..+ +...|..-+| ++
T Consensus 309 llQVGGarl~~~~Arrv~~~l-gC~LQ-QVFGMAEGLvnyTRL--DDp~E~--i~~TQGrPlsP~DEvrvvD--~d---- 376 (542)
T COG1021 309 LLQVGGARLSATLARRVPAVL-GCQLQ-QVFGMAEGLVNYTRL--DDPPEI--IIHTQGRPLSPDDEVRVVD--AD---- 376 (542)
T ss_pred EEeecCcccCHHHHhhchhhh-CchHH-HHhhhhhhhhccccc--CCchHh--eeecCCCcCCCcceeEEec--CC----
Confidence 444443 335567888888 89999 999999999877542 222222 12221 4566777666 22
Q ss_pred ccCCCcccccccccCCCeEEEEe---cccCceee--------------eeeCCEEEEecccCCCcEEEEEeecCceeeee
Q 012409 258 LCIEPKPVGLTEVKVGEEYEIIV---TNVAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTIN 320 (464)
Q Consensus 258 ~~~~~~~l~l~eve~G~~YelVv---Tt~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~ 320 (464)
+ .+|.+||.++|.. .|+.|+|| ||+||+|+.+ ..-.+.+.||.||.||..
T Consensus 377 ----g-----~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~----~dGyl~V~GR~KDQINRg 443 (542)
T COG1021 377 ----G-----NPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRD----PDGYLVVEGRVKDQINRG 443 (542)
T ss_pred ----C-----CCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEec----CCceEEEEeeehhhhccc
Confidence 3 2477999999999 89999999 9999999999 667899999999999999
Q ss_pred eeecCHHHHHHHHHHH
Q 012409 321 IDKNTEKDLQLSVDEA 336 (464)
Q Consensus 321 GEkv~e~~v~~av~~a 336 (464)
||||-.+||++.+.+-
T Consensus 444 GEKIAAeEvEn~LL~H 459 (542)
T COG1021 444 GEKIAAEEVENLLLRH 459 (542)
T ss_pred cchhhHHHHHHHHhhC
Confidence 9999999999988754
No 10
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=98.82 E-value=1.4e-06 Score=96.19 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=83.2
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCC--CCeeccccccccceeeecCC-C---CCCcccceeeecCCCceeEEEeC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGD--LPLMSADYGSSEGWIGANVN-P---SLPPELATFAVLPNIGYFEFIPQ 248 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~--~~~~~~~y~aSEg~~gi~~~-~---~~~~~~~~~~l~~~~~ffEFip~ 248 (464)
+.|+ .+.+|+ .......+++.++. ++++ ..||+||+...+-.. + .+.+...+. .+|+. -.+.++.
T Consensus 367 ~~lr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~vG~-p~~g~-~~~i~d~ 440 (637)
T PRK00174 367 SSLR---LLGSVGEPINPEAWEWYYKVVGGERCPIV-DTWWQTETGGIMITPLPGATPLKPGSATR-PLPGI-QPAVVDE 440 (637)
T ss_pred ccee---EEEEeCCCCCHHHHHHHHHHhCCCCCceE-ecccccccCCceEecCCCCCCcCCCcccC-CCCCc-eEEEECC
Confidence 5666 334333 22344566666653 8888 999999974321110 0 111112221 22222 2344432
Q ss_pred CCCCcccccccCCCcccccccccCCCeEEEEeccc-----Ccee----------------eeeeCCEEEEecccCCCcEE
Q 012409 249 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY----------------RYRLGDVVKVMGFHNSTPEL 307 (464)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~-----~GLy----------------RYr~GDvV~v~gf~~~~P~i 307 (464)
+ ++ +++.|+.+||+++.. .|+| .|++||++++. ..-.+
T Consensus 441 ~------------g~-----~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l 499 (637)
T PRK00174 441 E------------GN-----PLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRD----EDGYY 499 (637)
T ss_pred C------------CC-----CCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEc----CCCcE
Confidence 2 22 356899999999751 1221 29999999987 45679
Q ss_pred EEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 308 KFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 308 ~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.|+||.++++++.|++++..+|+++|.+.
T Consensus 500 ~~~GR~dd~ik~~G~~v~p~eIE~~l~~~ 528 (637)
T PRK00174 500 WITGRVDDVLNVSGHRLGTAEIESALVAH 528 (637)
T ss_pred EEEEecccEEEeCCEEECHHHHHHHHHhC
Confidence 99999999999999999999999999743
No 11
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=98.78 E-value=2.3e-06 Score=94.02 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=76.9
Q ss_pred HHHHHHHHhCC--CCeeccccccccceeeecC-CC---CCCcccceeeecCCCceeEEEeCCCCCcccccccCCCccccc
Q 012409 194 YLKKLRHYAGD--LPLMSADYGSSEGWIGANV-NP---SLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGL 267 (464)
Q Consensus 194 Y~~~l~~~~~~--~~~~~~~y~aSEg~~gi~~-~~---~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l 267 (464)
-.+.+.+.++. ++++ ..||+||+...+-. .+ ...+...+. .+|+ .-.+.++.+ +
T Consensus 374 ~~~~~~~~~~~~~~~i~-~~yG~TE~~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d~~------------g----- 433 (625)
T TIGR02188 374 AWMWYYKVVGKERCPIV-DTWWQTETGGIMITPLPGATPTKPGSATL-PFFG-IEPAVVDEE------------G----- 433 (625)
T ss_pred HHHHHHHHcCCCCCceE-ecccccccCCceeecCCCCCCcCCCcccC-CcCC-ceEEEECCC------------C-----
Confidence 34566666653 8888 99999997432110 00 011111221 1222 223333311 2
Q ss_pred cccc-CCCeEEEEeccc-----Cceee----------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecC
Q 012409 268 TEVK-VGEEYEIIVTNV-----AGLYR----------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNT 325 (464)
Q Consensus 268 ~eve-~G~~YelVvTt~-----~GLyR----------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~ 325 (464)
.+++ +|+.+||+++.. .|+|. |++||++++. ..-.+.|+||.++++++.|++++
T Consensus 434 ~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l~i~GR~dd~i~~~G~ri~ 509 (625)
T TIGR02188 434 NPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRD----KDGYIWITGRVDDVINVSGHRLG 509 (625)
T ss_pred CCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEc----CCCcEEEEecccCEEEeCCEEEC
Confidence 2356 799999999762 23321 8999999987 44578899999999999999999
Q ss_pred HHHHHHHHHHH
Q 012409 326 EKDLQLSVDEA 336 (464)
Q Consensus 326 e~~v~~av~~a 336 (464)
..+|+++|.+.
T Consensus 510 p~eIE~~l~~~ 520 (625)
T TIGR02188 510 TAEIESALVSH 520 (625)
T ss_pred HHHHHHHHHhC
Confidence 99999999853
No 12
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=98.77 E-value=6.1e-07 Score=99.52 Aligned_cols=131 Identities=17% Similarity=0.123 Sum_probs=85.1
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCC---CCcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
++|+ .+.+|+ .....+.+++.+ |+++. +.||+||+...+-.... .+....+. .+|. .-.+.++.+
T Consensus 380 ~~Lr---~i~~~G~~l~~~~~~~~~~~~-g~~i~-~~yG~TE~~~~~~~~~~~~~~~~~s~G~-p~~g-~~~~i~d~~-- 450 (647)
T PTZ00237 380 SNLK---EIWCGGEVIEESIPEYIENKL-KIKSS-RGYGQTEIGITYLYCYGHINIPYNATGV-PSIF-IKPSILSED-- 450 (647)
T ss_pred chhe---EEEecCccCCHHHHHHHHHhc-CCCEE-eeechHHhChhhhccCCCCCCCCCCCcc-CcCC-ceEEEECCC--
Confidence 5666 344443 224446677777 68888 99999998533211110 00011111 1121 123333211
Q ss_pred CcccccccCCCcccccccccCCCeEEEEecc------cCceee---------------eeeCCEEEEecccCCCcEEEEE
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN------VAGLYR---------------YRLGDVVKVMGFHNSTPELKFI 310 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt------~~GLyR---------------Yr~GDvV~v~gf~~~~P~i~f~ 310 (464)
+ .+++.|+.+||+++. ..|+|+ |++||+.++. ..-.+.|+
T Consensus 451 ----------g-----~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d----~dG~l~i~ 511 (647)
T PTZ00237 451 ----------G-----KELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKD----ENGYYTIV 511 (647)
T ss_pred ----------C-----CCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEEC----CCCeEEEE
Confidence 2 246689999999963 256663 9999999987 55779999
Q ss_pred eecCceeeeeeeecCHHHHHHHHHHH
Q 012409 311 CRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 311 gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
||.++++++.|++++..+|++++.+.
T Consensus 512 GR~dd~i~~~G~rI~p~eIE~~l~~~ 537 (647)
T PTZ00237 512 SRSDDQIKISGNKVQLNTIETSILKH 537 (647)
T ss_pred eccCCEEEECCEEeCHHHHHHHHHhC
Confidence 99999999999999999999999854
No 13
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=98.75 E-value=1.6e-07 Score=101.52 Aligned_cols=134 Identities=16% Similarity=0.171 Sum_probs=88.4
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
.|+++ .+.+|+ .....+++++.++++++. ..||+||+...+...+.. .+...+. ..|+ .|+.-.++
T Consensus 298 ~~~lr---~i~~gG~~l~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG~-p~~g---~~v~i~d~ 369 (539)
T PRK06334 298 LPSLR---FVVIGGDAFKDSLYQEALKTFPHIQLR-QGYGTTECSPVITINTVNSPKHESCVGM-PIRG---MDVLIVSE 369 (539)
T ss_pred ccccc---EEEECCccCCHHHHHHHHHHCCCCeEE-ecccccccCceEEeccCCCCCCCCcCce-ecCC---CEEEEEcC
Confidence 35677 444443 335667788888889998 999999984322211111 0111222 2233 23332231
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Ccee---------------eeeeCCEEEEecccCCCcEEEEEee
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY---------------RYRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy---------------RYr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
. ++ .++..|+.+||++... .|+| -|++||+.++. ....+.|+||
T Consensus 370 --~-------~~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d----~~G~l~~~GR 431 (539)
T PRK06334 370 --E-------TK-----VPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVD----RHGELFLKGR 431 (539)
T ss_pred --C-------CC-----ccCCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEEC----CCCeEEEEec
Confidence 1 12 2467899999999543 3443 39999999987 5567899999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.++++++.|++++..+|++++.+.
T Consensus 432 ~~d~ik~~G~~v~p~eIE~~l~~~ 455 (539)
T PRK06334 432 LSRFVKIGAEMVSLEALESILMEG 455 (539)
T ss_pred cCCeEEECCEEECHHHHHHHHHHc
Confidence 999999999999999999999854
No 14
>PRK06060 acyl-CoA synthetase; Validated
Probab=98.75 E-value=1.1e-06 Score=98.26 Aligned_cols=133 Identities=17% Similarity=0.195 Sum_probs=88.3
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCC--CCCcccceeeecCCCceeEEEeCCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~--~~~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
+++++ ++++|+ ....++++.+.+++++++ +.||+||+........ ...+...+ ...++. ..+.++.+
T Consensus 259 ~~slr---~i~~gGe~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~iG-~p~~~~-~v~i~d~~-- 330 (705)
T PRK06060 259 FRSLR---CVVSAGEALELGLAERLMEFFGGIPIL-DGIGSTEVGQTFVSNRVDEWRLGTLG-RVLPPY-EIRVVAPD-- 330 (705)
T ss_pred cccee---EEEEecCcCCHHHHHHHHHHcCCCceE-eeeeccccCceEEeccCCCCCcCccc-ccCCCc-EEEEECCC--
Confidence 35666 445443 335567788888889998 9999999743221111 11111112 223332 33444322
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Cceee-----------eeeCCEEEEecccCCCcEEEEEeecCcee
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR-----------YRLGDVVKVMGFHNSTPELKFICRRNLLL 317 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR-----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l 317 (464)
+ .++..|+.+||+|+.. .|+|. |+|||++++. ..-.+.|+||.++++
T Consensus 331 ----------g-----~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGDl~~~~----~dG~l~~~GR~dd~i 391 (705)
T PRK06060 331 ----------G-----TTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRDRVCID----SDGWVTYRCRADDTE 391 (705)
T ss_pred ----------C-----CCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCeeEEEC----CCceEEEecccCceE
Confidence 2 1356899999999652 45543 9999999986 445799999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 012409 318 TINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 318 ~v~GEkv~e~~v~~av~~a 336 (464)
+++|+++...+|+.++.+.
T Consensus 392 k~~G~~v~~~eIE~~l~~~ 410 (705)
T PRK06060 392 VIGGVNVDPREVERLIIED 410 (705)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999753
No 15
>PRK09274 peptide synthase; Provisional
Probab=98.75 E-value=8.6e-07 Score=95.60 Aligned_cols=142 Identities=14% Similarity=0.142 Sum_probs=88.9
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhC-CCCeeccccccccceeeecCCCCC---------C--cc-cceeeecCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAG-DLPLMSADYGSSEGWIGANVNPSL---------P--PE-LATFAVLPNI 240 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~-~~~~~~~~y~aSEg~~gi~~~~~~---------~--~~-~~~~~l~~~~ 240 (464)
.|+++ .+.+|+ ....++++++.++ |++++ ..||+||+.......... . .. ..+ ..+|+.
T Consensus 287 ~~~lr---~~~~gG~~~~~~~~~~~~~~~~~~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG-~~~~~~ 361 (552)
T PRK09274 287 LPSLR---RVISAGAPVPIAVIERFRAMLPPDAEIL-TPYGATEALPISSIESREILFATRAATDNGAGICVG-RPVDGV 361 (552)
T ss_pred Cchhh---EEEecCCcCCHHHHHHHHHHcCCCceEE-ccccccccceeEeecchhhhccccccccCCCCcccC-ccCCCc
Confidence 35677 444443 3466788888886 48888 999999975322111100 0 00 011 122332
Q ss_pred ceeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEeccc---C------------------ceeeeeeCCEEEEec
Q 012409 241 GYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---A------------------GLYRYRLGDVVKVMG 299 (464)
Q Consensus 241 ~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~------------------GLyRYr~GDvV~v~g 299 (464)
-..+++.++ .. .+.-=.-.++..|+.+||++... . |-.+|++||++++.
T Consensus 362 -~~~ivd~~~--~~------~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d- 431 (552)
T PRK09274 362 -EVRIIAISD--AP------IPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLD- 431 (552)
T ss_pred -eEEEEeccc--cc------cccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEc-
Confidence 234454321 10 00000123577899999999432 1 22379999999987
Q ss_pred ccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 300 FHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 300 f~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
....+.|+||.++++++.|++++..+|++++.+.
T Consensus 432 ---~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (552)
T PRK09274 432 ---AQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTH 465 (552)
T ss_pred ---cCCcEEEEeccCCeEEECCEEECcHHHHHHHHhC
Confidence 4567999999999999999999999999999854
No 16
>PRK07514 malonyl-CoA synthase; Validated
Probab=98.72 E-value=6.8e-07 Score=94.83 Aligned_cols=135 Identities=17% Similarity=0.197 Sum_probs=88.6
Q ss_pred ccCCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCC--CCCCcccceeeecCCCceeEEEeCC
Q 012409 175 ELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN--PSLPPELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 175 ~lWP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~--~~~~~~~~~~~l~~~~~ffEFip~~ 249 (464)
...++++ ++.+|+ .....+.+++.+ +.+++ ..||+||+.+..... ....+...+ ...++ ....+++++
T Consensus 266 ~~~~~lr---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G-~~~~~-~~v~i~d~~ 338 (504)
T PRK07514 266 EAAAHMR---LFISGSAPLLAETHREFQERT-GHAIL-ERYGMTETNMNTSNPYDGERRAGTVG-FPLPG-VSLRVTDPE 338 (504)
T ss_pred cccccee---eEEecCCCCCHHHHHHHHHHh-CCcce-eecccccccccccCCccccccCcccc-cCCCC-cEEEEEECC
Confidence 3456777 455453 224446666666 67888 899999985432211 111111111 12223 344555533
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEeccc---Cceee--------------eeeCCEEEEecccCCCcEEEEEee
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR--------------YRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
+ + ..++.|+.+||++++. .|+|+ |++||++++. ..-.+.|+||
T Consensus 339 ---~--------~-----~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~----~~g~~~~~GR 398 (504)
T PRK07514 339 ---T--------G-----AELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKID----ERGYVHIVGR 398 (504)
T ss_pred ---C--------C-----CCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEc----CCccEEEecc
Confidence 1 2 2366899999999763 56664 9999999987 3457899999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.++++++.|++++..+|++++.+.
T Consensus 399 ~~~~i~~~G~~i~~~~IE~~l~~~ 422 (504)
T PRK07514 399 GKDLIISGGYNVYPKEVEGEIDEL 422 (504)
T ss_pred ccceEEeCCeEECHHHHHHHHHhC
Confidence 999999999999999999999743
No 17
>PLN02574 4-coumarate--CoA ligase-like
Probab=98.69 E-value=8.7e-07 Score=96.13 Aligned_cols=133 Identities=14% Similarity=0.142 Sum_probs=88.0
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeec--CCCCC--CcccceeeecCCCceeEEEeCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN--VNPSL--PPELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~--~~~~~--~~~~~~~~l~~~~~ffEFip~~ 249 (464)
++.++ ++..|+ ....++++++.++++++. ..||+||+..... ..... .+...+ ...|+ .-.+.++.+
T Consensus 318 ~~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~vG-~~~~~-~~v~i~d~~ 391 (560)
T PLN02574 318 LKSLK---QVSCGAAPLSGKFIQDFVQTLPHVDFI-QGYGMTESTAVGTRGFNTEKLSKYSSVG-LLAPN-MQAKVVDWS 391 (560)
T ss_pred cccce---EEEEecccCCHHHHHHHHHHCCCCcEE-ecccccccCceeecCCCccccCCCCcee-eeCCC-cEEEEEeCC
Confidence 45666 333333 335567777778889998 9999999743211 11111 111122 22333 334555533
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEeccc---Cceee--------------eeeCCEEEEecccCCCcEEEEEee
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR--------------YRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
++ .+++.|+.+||+++.. .|+|. |++||+.++. ..-.+.|+||
T Consensus 392 -----------~g-----~~~~~g~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~----~~G~l~i~GR 451 (560)
T PLN02574 392 -----------TG-----CLLPPGNCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFD----EDGYLYIVDR 451 (560)
T ss_pred -----------CC-----cCCCCCCCeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEE----CCCeEEEEec
Confidence 12 2467899999999753 34432 8999999997 4567999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
.++++++.|++++..+|+.++.+
T Consensus 452 ~~d~i~~~G~~v~~~eiE~~l~~ 474 (560)
T PLN02574 452 LKEIIKYKGFQIAPADLEAVLIS 474 (560)
T ss_pred chhheEECCEEECHHHHHHHHHh
Confidence 99999999999999999998874
No 18
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=98.69 E-value=2.2e-06 Score=93.10 Aligned_cols=132 Identities=13% Similarity=0.105 Sum_probs=86.1
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeecccccccccee--eecCCC-CCCcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI--GANVNP-SLPPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~--gi~~~~-~~~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
+++++ ++.+|+ .......+++.+ ++++. ..||+||... ..+... ...+...+. ..|+ ...++++.+
T Consensus 322 ~~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~g-~~~~i~d~~- 393 (570)
T PRK04319 322 LSSLR---HILSVGEPLNPEVVRWGMKVF-GLPIH-DNWWMTETGGIMIANYPAMDIKPGSMGK-PLPG-IEAAIVDDQ- 393 (570)
T ss_pred cccce---EEEEcccCCCHHHHHHHHHHh-CCCeE-eceeecccCCEEEecCCCCCCCCCcCcC-CCCC-CEEEEECCC-
Confidence 45677 444443 224456666667 68888 9999999742 221110 111112221 2232 234454422
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc-----Ccee-------------eeeeCCEEEEecccCCCcEEEEEee
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLY-------------RYRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~-----~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
+ .++++|+.+||+++.. .|+| -|++||+.++. ..-.+.|+||
T Consensus 394 -----------~-----~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~----~~g~l~~~GR 453 (570)
T PRK04319 394 -----------G-----NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMD----EDGYFWFQGR 453 (570)
T ss_pred -----------C-----CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEEC----CCeeEEEEec
Confidence 1 1357899999999741 3554 28999999987 4557899999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.++++++.|+|+++.+|++++.+.
T Consensus 454 ~~d~i~~~G~~i~p~eIE~~l~~~ 477 (570)
T PRK04319 454 VDDVIKTSGERVGPFEVESKLMEH 477 (570)
T ss_pred CCCEEEECCEEECHHHHHHHHhhC
Confidence 999999999999999999999854
No 19
>PRK07529 AMP-binding domain protein; Validated
Probab=98.69 E-value=6.7e-07 Score=98.76 Aligned_cols=137 Identities=12% Similarity=0.139 Sum_probs=90.3
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
++.++ .+.+|+ ....++++++.+ +++++ ++||+||+.......+.. .+...+. .+|+. -..++..+
T Consensus 332 ~~slr---~v~~gg~~l~~~l~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~~svG~-~~p~~-~v~i~~~d- 403 (632)
T PRK07529 332 ISSLR---YALCGAAPLPVEVFRRFEAAT-GVRIV-EGYGLTEATCVSSVNPPDGERRIGSVGL-RLPYQ-RVRVVILD- 403 (632)
T ss_pred ccceE---EEEEcCCCCCHHHHHHHHHHh-CCcEe-eeecccccCcccccCCccccccCCCccc-ccCCc-eEEEEEcC-
Confidence 35666 444443 335567777777 79998 999999985443322211 1111222 22322 34555444
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecC
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
+. +. ...++..|+.+||+|++. .|++ -|++||+.++. ....+.|+||.+
T Consensus 404 -~~--------g~--~~~~~~~g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d----~dG~l~i~GR~~ 468 (632)
T PRK07529 404 -DA--------GR--YLRDCAVDEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRID----ADGYFWLTGRAK 468 (632)
T ss_pred -CC--------Cc--ccccCCCCCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEc----CCceEEEEeccc
Confidence 11 11 113467899999999653 4432 28999999987 456899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~a 336 (464)
+++++.|+++++.+|++++.+.
T Consensus 469 d~i~~~G~~i~p~eIE~~l~~~ 490 (632)
T PRK07529 469 DLIIRGGHNIDPAAIEEALLRH 490 (632)
T ss_pred CEEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999753
No 20
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=98.68 E-value=1.3e-06 Score=94.38 Aligned_cols=131 Identities=9% Similarity=0.159 Sum_probs=86.8
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC----cccceeeecCCCceeEEEeCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP----PELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~----~~~~~~~l~~~~~ffEFip~~ 249 (464)
.|+++ ++++|+ ....++++++.+ +++++ +.||+||+.......+... ....+. ..|+. -.+.++.+
T Consensus 311 ~~~l~---~~~~~G~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~~~-~v~i~d~~ 383 (547)
T PRK13295 311 VSSLR---TFLCAGAPIPGALVERARAAL-GAKIV-SAWGMTENGAVTLTKLDDPDERASTTDGC-PLPGV-EVRVVDAD 383 (547)
T ss_pred cccce---EEEEecCCCCHHHHHHHHHHh-CCCeE-EeccCCCCCCeeeccCCCcchhccCcccc-ccCCc-EEEEECCC
Confidence 46676 444443 345667777777 89999 9999999743221111100 001111 12221 23333322
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEeccc---Cceee------------eeeCCEEEEecccCCCcEEEEEeecC
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR------------YRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
+ .++..|+.+||+++.. .|+|. |++||++++. ....+.|+||.+
T Consensus 384 ------------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~g~~~TGD~~~~~----~~g~l~~~gR~~ 442 (547)
T PRK13295 384 ------------G-----APLPAGQIGRLQVRGCSNFGGYLKRPQLNGTDADGWFDTGDLARID----ADGYIRISGRSK 442 (547)
T ss_pred ------------C-----CCCCCCCCCeEEEEcCcccccccCCccccccCCCCCeecceEEEEc----CCceEEEEeccC
Confidence 1 2466899999999764 45442 9999999997 556899999999
Q ss_pred ceeeeeeeecCHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~ 335 (464)
+++++.|+|++..+|++++.+
T Consensus 443 ~~i~~~G~~v~p~~IE~~l~~ 463 (547)
T PRK13295 443 DVIIRGGENIPVVEIEALLYR 463 (547)
T ss_pred CeEEECCEEECHHHHHHHHHh
Confidence 999999999999999999874
No 21
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=98.67 E-value=1.8e-06 Score=92.94 Aligned_cols=133 Identities=15% Similarity=0.184 Sum_probs=86.5
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCC-C--CCCcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-P--SLPPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~-~--~~~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
+.++ +++.|+ .....+.+++.+ +++++ ..||.||+....... . ...+...++. .+.. .++....+
T Consensus 312 ~~l~---~i~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~~~G~~-~~~~-~~~v~~~d-- 382 (541)
T TIGR03205 312 SSLA---TIGSGGAPLPVEVANFFERKT-GLKLK-SGWGMTETCSPGTGHPPEGPDKPGSIGLM-LPGI-ELDVVSLD-- 382 (541)
T ss_pred cccc---eEEEccccCCHHHHHHHHHHh-CCCee-cccccccCCcccccCCCCCCCCCCCccee-ccCc-eeEEEecC--
Confidence 4566 445443 224456666666 68888 999999984322111 0 1111223332 2322 33444434
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCc
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 315 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~ 315 (464)
+. + .+++.|+.+||++++. .|+| +|++||+.++. ..-.+.|+||.++
T Consensus 383 ~~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~----~~g~l~i~GR~~~ 445 (541)
T TIGR03205 383 DP--------T-----KVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMD----TDGYFFLVDRKKD 445 (541)
T ss_pred CC--------C-----ccCCCCCeeEEEEecCCccccccCChhhhHhhhccCCcccCceEEEc----CCceEEEEccccC
Confidence 11 2 2456899999999863 4444 58999999986 3357889999999
Q ss_pred eeeeeeeecCHHHHHHHHHHH
Q 012409 316 LLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 316 ~l~v~GEkv~e~~v~~av~~a 336 (464)
++++.|+++++.+|++++.+.
T Consensus 446 ~i~~~G~~i~~~eIE~~l~~~ 466 (541)
T TIGR03205 446 MIISGGFNVYPQMIEQAIYEH 466 (541)
T ss_pred eEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999743
No 22
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.66 E-value=9.1e-07 Score=95.97 Aligned_cols=134 Identities=17% Similarity=0.215 Sum_probs=88.1
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC---cccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP---PELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~---~~~~~~~l~~~~~ffEFip~~~ 250 (464)
+++++ .+.+|+ ......++++.+ +++++ ..||+||+...+...+..+ +...+ ...|+ ...+.++.+
T Consensus 335 ~~~lr---~i~~gg~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~~G-~~~~~-~~~~i~d~~- 406 (573)
T PRK05605 335 LSGVR---NAFSGAMALPVSTVELWEKLT-GGLLV-EGYGLTETSPIIVGNPMSDDRRPGYVG-VPFPD-TEVRIVDPE- 406 (573)
T ss_pred chhcc---EEEECCCcCCHHHHHHHHHHh-CCCee-cccccchhchhhhcCCcccCCcCCccc-cCCCC-CEEEEEcCC-
Confidence 35666 444443 335556666666 68888 9999999853221111111 11122 22333 345666544
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecC
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
.. + .++..|+.+||++++. .|+| .|++||++++. ..-.+.|+||.+
T Consensus 407 -~~--------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~l~i~gR~d 468 (573)
T PRK05605 407 -DP--------D-----ETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVME----EDGFIRIVDRIK 468 (573)
T ss_pred -CC--------C-----ccCCCCCeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEc----CCCcEEEEeccc
Confidence 10 1 2356899999999754 4555 49999999986 445789999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~a 336 (464)
+++++.|+|++..+|++++...
T Consensus 469 d~i~~~G~~v~p~eIE~~l~~~ 490 (573)
T PRK05605 469 ELIITGGFNVYPAEVEEVLREH 490 (573)
T ss_pred cceeeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999743
No 23
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=98.64 E-value=2.4e-06 Score=92.34 Aligned_cols=131 Identities=15% Similarity=0.151 Sum_probs=86.7
Q ss_pred CCCceeEEEeecC-hHHHHHHHHHHhCCCCeeccccccccceeeecCC-CCCCcccceeeecCCCceeEEEeCCCCCccc
Q 012409 178 PNAKYLSGIMTGS-MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSLPPELATFAVLPNIGYFEFIPQRLGNLES 255 (464)
Q Consensus 178 P~l~~i~~~~tG~-~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~-~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 255 (464)
++++ .+.+|+ ....++++++.+ +++++ +.||+||+...+... +...+...+. ..++ .-.++++.+
T Consensus 294 ~~l~---~~~~g~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~vG~-~~~~-~~~~i~d~~------ 360 (542)
T PRK06155 294 HRVR---VALGPGVPAALHAAFRERF-GVDLL-DGYGSTETNFVIAVTHGSQRPGSMGR-LAPG-FEARVVDEH------ 360 (542)
T ss_pred CceE---EEEEcCCCHHHHHHHHHHc-CCCEE-eeecccccCccccCCCCCCCCCCcCc-cCCC-ceEEEECCC------
Confidence 3555 233444 344556677777 78988 999999985433211 1111112221 2222 234454322
Q ss_pred ccccCCCcccccccccCCCeEEEEeccc------Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCce
Q 012409 256 QVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLL 316 (464)
Q Consensus 256 ~~~~~~~~~l~l~eve~G~~YelVvTt~------~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~ 316 (464)
+ .++..|+.+||++++. .|+| +|++||+.++. ....+.|+||.+++
T Consensus 361 ------~-----~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~----~dG~l~i~GR~~d~ 425 (542)
T PRK06155 361 ------D-----QELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRD----ADGWFRFVDRIKDA 425 (542)
T ss_pred ------C-----CCCCCCCceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccceEEEc----CCceEEEEecCCCE
Confidence 2 2466899999999764 3443 69999999986 45678999999999
Q ss_pred eeeeeeecCHHHHHHHHHHH
Q 012409 317 LTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 317 l~v~GEkv~e~~v~~av~~a 336 (464)
+++.|+|+++.+|++++.+.
T Consensus 426 i~~~G~~v~p~eIE~~l~~~ 445 (542)
T PRK06155 426 IRRRGENISSFEVEQVLLSH 445 (542)
T ss_pred EEeCCEEECHHHHHHHHHhC
Confidence 99999999999999999753
No 24
>PRK07788 acyl-CoA synthetase; Validated
Probab=98.63 E-value=2e-06 Score=92.87 Aligned_cols=132 Identities=16% Similarity=0.074 Sum_probs=85.3
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCC---CCcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
.|+++ .+..|+ ....++++++.+ +.+++ +.||+||+.+..-..+. ..+...+ ...++. -+++++.+
T Consensus 322 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~vG-~~~~~~-~~~i~d~~- 393 (549)
T PRK07788 322 TSSLK---IIFVSGSALSPELATRALEAF-GPVLY-NLYGSTEVAFATIATPEDLAEAPGTVG-RPPKGV-TVKILDEN- 393 (549)
T ss_pred CCcee---EEEEeCCCCCHHHHHHHHHHh-Cccce-eccCcchhchhhccChhhhhhcCCCcc-cCCCCc-EEEEECCC-
Confidence 35666 444443 335567777777 56777 99999996432211111 0111111 122332 23444322
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Cceee----------eeeCCEEEEecccCCCcEEEEEeecCcee
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR----------YRLGDVVKVMGFHNSTPELKFICRRNLLL 317 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l 317 (464)
+ .+++.|+.+||++++. .|++. |++||+.++. ..-.+.|+||.++++
T Consensus 394 -----------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~----~~g~l~~~GR~dd~i 453 (549)
T PRK07788 394 -----------G-----NEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLSSGDVGYFD----EDGLLFVDGRDDDMI 453 (549)
T ss_pred -----------c-----CCCCCCCeEEEEEeCCCccccccCCCcccccCCceecCceEEEc----CCCCEEEeccCcceE
Confidence 2 1356799999999874 33432 7899998886 456899999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 012409 318 TINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 318 ~v~GEkv~e~~v~~av~~a 336 (464)
++.|+|++..+|++++.+.
T Consensus 454 ~~~G~~v~p~eIE~~l~~~ 472 (549)
T PRK07788 454 VSGGENVFPAEVEDLLAGH 472 (549)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999743
No 25
>PRK07867 acyl-CoA synthetase; Validated
Probab=98.60 E-value=2.6e-06 Score=91.89 Aligned_cols=125 Identities=14% Similarity=0.168 Sum_probs=81.5
Q ss_pred EEeec-ChHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCCceeEEEeCCCCCcccccccCCCc
Q 012409 185 GIMTG-SMEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPK 263 (464)
Q Consensus 185 ~~~tG-~~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~ 263 (464)
++.+| ...+-..++.+.+ |++++ ..||+||+.+.+...+...+...+. ..++ .+++..+ . ++
T Consensus 271 ~~~gg~~~~~~~~~~~~~~-g~~l~-~~YG~TE~~~~~~~~~~~~~~~~g~-~~~~---~~i~~~~---~--------~~ 333 (529)
T PRK07867 271 IVYGNEGAPGDIARFARRF-GCVVV-DGFGSTEGGVAITRTPDTPPGALGP-LPPG---VAIVDPD---T--------GT 333 (529)
T ss_pred EEecCCCChHHHHHHHHHh-CCcEE-EeecccccccccccCCCCCCCCcCC-CCCC---EEEEECC---C--------CC
Confidence 34444 2333356666667 78888 9999999854333222211111221 2222 5666543 1 11
Q ss_pred ccccccccCCC------------eEEEEe-cc---cCcee-------------eeeeCCEEEEecccCCCcEEEEEeecC
Q 012409 264 PVGLTEVKVGE------------EYEIIV-TN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 264 ~l~l~eve~G~------------~YelVv-Tt---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
. +..|+ .+||++ .. ..|+| +|++||++++. ..-.+.|+||.+
T Consensus 334 ~-----~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~l~~~GR~~ 404 (529)
T PRK07867 334 E-----CPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRD----ADGYAYFAGRLG 404 (529)
T ss_pred C-----CCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEe----CCCcEEEecccc
Confidence 1 22333 799998 32 35555 79999999986 445789999999
Q ss_pred ceeeeeeeecCHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~ 335 (464)
+++++.|+|+++.+|++++.+
T Consensus 405 d~i~~~G~~v~p~eIE~~l~~ 425 (529)
T PRK07867 405 DWMRVDGENLGTAPIERILLR 425 (529)
T ss_pred CeEEECCEEeCHHHHHHHHHh
Confidence 999999999999999999984
No 26
>PRK09088 acyl-CoA synthetase; Validated
Probab=98.60 E-value=1.3e-06 Score=92.52 Aligned_cols=129 Identities=14% Similarity=0.249 Sum_probs=82.7
Q ss_pred CCCceeEEEeecCh---HHHHHHHHHHhCCCCeecccccccccee--eecCCCC---CCcccceeeecCCCceeEEEeCC
Q 012409 178 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWI--GANVNPS---LPPELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 178 P~l~~i~~~~tG~~---~~Y~~~l~~~~~~~~~~~~~y~aSEg~~--gi~~~~~---~~~~~~~~~l~~~~~ffEFip~~ 249 (464)
++++ .+.+|+. .....++.+ .+++++ ..||+||+.. +++..+. ..+...+ ...|+ ...++++.+
T Consensus 252 ~~l~---~~~~gG~~~~~~~~~~~~~--~g~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~vG-~~~~~-~~~~i~d~~ 323 (488)
T PRK09088 252 RHLT---ALFTGGAPHAAEDILGWLD--DGIPMV-DGFGMSEAGTVFGMSVDCDVIRAKAGAAG-IPTPT-VQTRVVDDQ 323 (488)
T ss_pred ccce---EEEecCCCCCHHHHHHHHH--hCCcee-eeecccccccccccCCCcccccccCCccc-cCCCC-cEEEEECCC
Confidence 5666 5555543 223333332 268888 8999999843 3222211 0111122 12232 334555422
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEeccc---Cceee--------------eeeCCEEEEecccCCCcEEEEEee
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR--------------YRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
+ .++..|+.+||++++. .|+|+ |++||++++. ....+.|+||
T Consensus 324 ------------~-----~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~l~i~GR 382 (488)
T PRK09088 324 ------------G-----NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRD----ADGFFWVVDR 382 (488)
T ss_pred ------------C-----CCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEc----CCCcEEEecc
Confidence 2 1356799999999763 44543 9999999997 4457899999
Q ss_pred cCceeeeeeeecCHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
.++++++.|+|++..+|++++.+
T Consensus 383 ~~d~i~~~G~~i~~~~iE~~l~~ 405 (488)
T PRK09088 383 KKDMFISGGENVYPAEIEAVLAD 405 (488)
T ss_pred ccceEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999999874
No 27
>PRK05852 acyl-CoA synthetase; Validated
Probab=98.59 E-value=1.9e-06 Score=92.61 Aligned_cols=153 Identities=12% Similarity=0.107 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCC---
Q 012409 152 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--- 225 (464)
Q Consensus 152 ~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~--- 225 (464)
.|..+..|.+..... ....-+|.++ .+.+|+ ....++.+++.+ +++++ ..||+||+...+...+
T Consensus 274 ~P~~~~~l~~~~~~~-----~~~~~~~~lr---~i~~~G~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~ 343 (534)
T PRK05852 274 VPTIHQILLERAATE-----PSGRKPAALR---FIRSCSAPLTAETAQALQTEF-AAPVV-CAFGMTEATHQVTTTQIEG 343 (534)
T ss_pred ChHHHHHHHhhcccc-----cccccCCCee---EEEECCCCCCHHHHHHHHHHh-CCChh-hccCccccchhhhcCCccc
Confidence 466666665432211 0123356777 444342 335567777778 78888 8999999743221110
Q ss_pred ----CCCcccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEeccc---Cceee----------
Q 012409 226 ----SLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR---------- 288 (464)
Q Consensus 226 ----~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR---------- 288 (464)
..+....+....+.....+.++.+ + .++++|+.+||+++.. .|+|+
T Consensus 344 ~~~~~~~~~~~g~~g~~~g~~~~i~d~~------------g-----~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~~ 406 (534)
T PRK05852 344 IGQTENPVVSTGLVGRSTGAQIRIVGSD------------G-----LPLPAGAVGEVWLRGTTVVRGYLGDPTITAANFT 406 (534)
T ss_pred cccccCcccccccCCCCCCCeEEEECCC------------C-----CCCCCCCceEEEEecCcccchhcCCcccchhhhc
Confidence 000011222110112334445322 2 2356899999999664 34443
Q ss_pred ---eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 012409 289 ---YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 289 ---Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
|++||+.++. ..-.+.|+||.++++++.|++++..+|++++.+
T Consensus 407 ~g~~~TGD~~~~d----~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~ 452 (534)
T PRK05852 407 DGWLRTGDLGSLS----AAGDLSIRGRIKELINRGGEKISPERVEGVLAS 452 (534)
T ss_pred CCCcccCceEEEe----CCCcEEEEecchhhEEECCEEECHHHHHHHHHh
Confidence 8999999987 445789999999999999999999999999974
No 28
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=98.59 E-value=9.4e-06 Score=89.34 Aligned_cols=132 Identities=7% Similarity=0.056 Sum_probs=84.0
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeee-cCCCC-----CCcccceeeecCCCceeEEEeC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGA-NVNPS-----LPPELATFAVLPNIGYFEFIPQ 248 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi-~~~~~-----~~~~~~~~~l~~~~~ffEFip~ 248 (464)
+.|+ .+.+|+ .....+.+++.+ +++++ ..||+||....+ ...+. ..+...+. .+|+. -.+.++.
T Consensus 355 ~~lr---~i~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~-p~~g~-~~~i~d~ 427 (629)
T PRK10524 355 SSLR---ALFLAGEPLDEPTASWISEAL-GVPVI-DNYWQTETGWPILAIARGVEDRPTRLGSPGV-PMYGY-NVKLLNE 427 (629)
T ss_pred hhee---EEEEeCCCCCHHHHHHHHHhc-CCCeE-eccccccccchhhcCCCCcccCcCCCCCccc-CcCCc-eEEEEeC
Confidence 4566 445443 224446666777 68888 999999984211 11110 00111111 12222 2344443
Q ss_pred CCCCcccccccCCCcccccccccCCCeEEEEeccc------Ccee-----------------eeeeCCEEEEecccCCCc
Q 012409 249 RLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-----------------RYRLGDVVKVMGFHNSTP 305 (464)
Q Consensus 249 ~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~------~GLy-----------------RYr~GDvV~v~gf~~~~P 305 (464)
+ +++ +++.|+.+||+++.. .|+| -|++||+.++. ..-
T Consensus 428 ~-----------~g~-----~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d----~dG 487 (629)
T PRK10524 428 V-----------TGE-----PCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRD----ADG 487 (629)
T ss_pred C-----------CCC-----CCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEc----CCC
Confidence 2 122 366899999999753 2222 39999999886 456
Q ss_pred EEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 306 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 306 ~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.+.|+||.++++++.|+++...+|++++.+.
T Consensus 488 ~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~ 518 (629)
T PRK10524 488 YYFILGRTDDVINVAGHRLGTREIEESISSH 518 (629)
T ss_pred cEEEEEEecCeEEeCCEEeCHHHHHHHHHhC
Confidence 7899999999999999999999999999753
No 29
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=98.59 E-value=1.1e-05 Score=89.31 Aligned_cols=225 Identities=14% Similarity=0.111 Sum_probs=121.1
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHh-CCCCeeccccccccceeeecCC-CCCC--cccceeeecCCCceeEEEeCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYA-GDLPLMSADYGSSEGWIGANVN-PSLP--PELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~-~~~~~~~~~y~aSEg~~gi~~~-~~~~--~~~~~~~l~~~~~ffEFip~~~ 250 (464)
+.|+ ++.+|+ ...-.+.+.+.+ +++++. ..||+||...++... +..+ +...+. ..|+. |+--++
T Consensus 383 ~sLr---~i~~~Ge~l~~~~~~~~~~~~~~~~~~~-~~yG~TE~~~~~~~~~~~~~~~~g~~g~-p~~g~---~~~ivd- 453 (655)
T PRK03584 383 SALR---TIGSTGSPLPPEGFDWVYEHVKADVWLA-SISGGTDICSCFVGGNPLLPVYRGEIQC-RGLGM---AVEAWD- 453 (655)
T ss_pred hheE---EEEEecCCCCHHHHHHHHHHhCCCceEE-eccChHhhhcccccCCCCCCcCCCccCC-CcCCc---eeEEEC-
Confidence 4555 444443 224445666666 358888 999999964322111 0000 111111 12221 322223
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc-----Cceee------------------eeeCCEEEEecccCCCcEE
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV-----AGLYR------------------YRLGDVVKVMGFHNSTPEL 307 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~-----~GLyR------------------Yr~GDvV~v~gf~~~~P~i 307 (464)
++ ++ ++ .|+.+||+|... .|+|. |++||+.++. ..-.+
T Consensus 454 -~~--------g~-----~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l 514 (655)
T PRK03584 454 -ED--------GR-----PV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEIT----EHGGV 514 (655)
T ss_pred -CC--------CC-----CC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEEC----CCCeE
Confidence 11 22 24 689999999752 34441 7899999987 45679
Q ss_pred EEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEe-ecCCCCCceEEEEEEecCC--CChHHHHHHHHH
Q 012409 308 KFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSH-VDLSTDPGHYVIFWEVSGE--VNDEVLKECCNC 384 (464)
Q Consensus 308 ~f~gR~~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~-~~~~~~p~hY~~~~E~~~~--~~~~~l~~~~~~ 384 (464)
.|+||.++++++.|++++..+|+.++.+.. .|.+-.++ .+.......-++|+++... .+++..+++.+.
T Consensus 515 ~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p--------~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~ 586 (655)
T PRK03584 515 VIYGRSDATLNRGGVRIGTAEIYRQVEALP--------EVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTT 586 (655)
T ss_pred EEEeeccCeeecCcEEECHHHHHHHHHhCC--------CcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999998531 23343332 1211122244577777532 233233344444
Q ss_pred HHhhccCcchHhhhhcCccCCeEEEEec------cchH-HHHHHHHhcCCCCCCCCCcCcccCCCCHhHHHHHh
Q 012409 385 LDRSFVDAGYVSARKVNAIGPLELRVVL------KGTF-QQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILC 451 (464)
Q Consensus 385 ld~~l~n~~Y~~~R~~g~l~pl~v~~v~------~GtF-~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~ 451 (464)
+.+.+ +.| ..|-.|.+|+ .|-- .+.++.. ..|...+|...+.-+. |++.++-+.
T Consensus 587 ~~~~L--~~~--------~~P~~i~~v~~lP~t~sGKi~r~~lr~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ 647 (655)
T PRK03584 587 IRTNL--SPR--------HVPDKIIAVPDIPRTLSGKKVELPVKKL-LHGRPVKKAVNRDALA--NPEALDWFA 647 (655)
T ss_pred HHhhC--CCC--------cCCCEEEECCCCCCCCCccchHHHHHHH-HcCCCCCCCCCccccc--CHHHHHHHH
Confidence 44332 111 2344455543 2221 1222222 2465666554566666 888887543
No 30
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.59 E-value=2.1e-06 Score=92.58 Aligned_cols=127 Identities=14% Similarity=0.172 Sum_probs=85.8
Q ss_pred EEeecC---hHHHHHHHHHHhCCCCeecccccccccee-eecCCCCC---CcccceeeecCCCceeEEEeCCCCCccccc
Q 012409 185 GIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL---PPELATFAVLPNIGYFEFIPQRLGNLESQV 257 (464)
Q Consensus 185 ~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~-gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~ 257 (464)
++.+|+ ....++.+++.+++.++. ..||+||+.. +....... .+...+. ..|+ ...++++.+
T Consensus 294 ~i~~gg~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~-------- 362 (542)
T PRK07786 294 VLSWGAAPASDTLLRQMAATFPEAQIL-AAFGQTEMSPVTCMLLGEDAIRKLGSVGK-VIPT-VAARVVDEN-------- 362 (542)
T ss_pred EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccceEecCcccccccCCCccc-cCCC-ceEEEECCC--------
Confidence 544443 345678888888899998 9999999742 11111100 0111121 2232 345555422
Q ss_pred ccCCCcccccccccCCCeEEEEecc---cCceee-------------eeeCCEEEEecccCCCcEEEEEeecCceeeeee
Q 012409 258 LCIEPKPVGLTEVKVGEEYEIIVTN---VAGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINI 321 (464)
Q Consensus 258 ~~~~~~~l~l~eve~G~~YelVvTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~G 321 (464)
. .++..|+.+||++.. ..|+|+ |++||++++. ..-.+.|+||.++++++.|
T Consensus 363 ----~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl~~~~----~~g~~~i~GR~~d~i~~~G 429 (542)
T PRK07786 363 ----M-----NDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDLVRQD----EEGYVWVVDRKKDMIISGG 429 (542)
T ss_pred ----C-----CCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccceEEEc----CCceEEEEecccceEEeCC
Confidence 1 235689999999954 355553 9999999987 3457899999999999999
Q ss_pred eecCHHHHHHHHHH
Q 012409 322 DKNTEKDLQLSVDE 335 (464)
Q Consensus 322 Ekv~e~~v~~av~~ 335 (464)
++++..+|++++.+
T Consensus 430 ~~v~~~eiE~~l~~ 443 (542)
T PRK07786 430 ENIYCAEVENVLAS 443 (542)
T ss_pred EEECHHHHHHHHHh
Confidence 99999999999974
No 31
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.57 E-value=2.5e-06 Score=92.33 Aligned_cols=130 Identities=18% Similarity=0.188 Sum_probs=85.3
Q ss_pred CCCceeEEEeecCh---HHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~~---~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
|+++ ++.+|+. ..-.+++++.+ |++++ ..||+||+...+...... .+...++ ..|+ .-.++++.+
T Consensus 325 ~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~-- 395 (560)
T PRK08974 325 SSLK---LSVGGGMAVQQAVAERWVKLT-GQYLL-EGYGLTECSPLVSVNPYDLDYYSGSIGL-PVPS-TEIKLVDDD-- 395 (560)
T ss_pred ccee---EEEecCccCCHHHHHHHHHHh-CCcEE-eeecccccCceeeccCCCCcccCCcccc-CcCC-CEEEEECCC--
Confidence 4565 5555542 23345666666 78988 899999975432221110 0111222 1222 234444322
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Cceee-------------eeeCCEEEEecccCCCcEEEEEeecCc
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNL 315 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 315 (464)
+ .++..|+.+||++++. .|+|. |++||++++. ....+.|+||.++
T Consensus 396 ----------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~l~i~GR~~d 456 (560)
T PRK08974 396 ----------G-----NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMD----EEGFLRIVDRKKD 456 (560)
T ss_pred ----------C-----CCCCCCCceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEc----CCceEEEEecccc
Confidence 2 2466899999999654 44443 9999999986 4467899999999
Q ss_pred eeeeeeeecCHHHHHHHHHH
Q 012409 316 LLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 316 ~l~v~GEkv~e~~v~~av~~ 335 (464)
++++.|+|++..+|++++.+
T Consensus 457 ~i~~~G~~i~~~~IE~~l~~ 476 (560)
T PRK08974 457 MILVSGFNVYPNEIEDVVML 476 (560)
T ss_pred eEEeCCEEECHHHHHHHHHh
Confidence 99999999999999999974
No 32
>PRK13382 acyl-CoA synthetase; Provisional
Probab=98.57 E-value=3.4e-06 Score=90.99 Aligned_cols=132 Identities=15% Similarity=0.105 Sum_probs=85.7
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCC---CCcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
+++++ .+..|+ ....+.++++.+ +.+++ ..||+||+.......+. ..+...+ ...++ .-.++++.+
T Consensus 311 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-~~~i~-~~YG~TE~~~~~~~~~~~~~~~~~~vG-~p~~~-~~~~i~d~~- 382 (537)
T PRK13382 311 GRSLR---FAAASGSRMRPDVVIAFMDQF-GDVIY-NNYNATEAGMIATATPADLRAAPDTAG-RPAEG-TEIRILDQD- 382 (537)
T ss_pred cccee---EEEEcCCCCCHHHHHHHHHHc-CCcEE-ecccccccCcceecChhHhccCCCCcc-ccCcC-cEEEEECCC-
Confidence 35666 444443 345667777778 56777 99999997542211111 0011111 11222 234444322
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Cce----------eeeeeCCEEEEecccCCCcEEEEEeecCcee
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGL----------YRYRLGDVVKVMGFHNSTPELKFICRRNLLL 317 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GL----------yRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 317 (464)
. .+++.|+.+||++++. .|+ -.|++||++++. ..-.+.|+||.++++
T Consensus 383 -----------~-----~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~TGDl~~~~----~~g~l~~~GR~dd~i 442 (537)
T PRK13382 383 -----------F-----REVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMASGDVGYLD----ENGRLFVVGRDDEMI 442 (537)
T ss_pred -----------C-----CCCCCCCeeEEEEEcCCcccCccccchhhccCCCEeeCceEEEe----CCCcEEEecccccee
Confidence 1 2356899999999764 222 148999999987 345688999999999
Q ss_pred eeeeeecCHHHHHHHHHHH
Q 012409 318 TINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 318 ~v~GEkv~e~~v~~av~~a 336 (464)
++.|++++..+|+.++.+.
T Consensus 443 k~~G~~v~~~eIE~~l~~~ 461 (537)
T PRK13382 443 VSGGENVYPIEVEKTLATH 461 (537)
T ss_pred EECCEEECHHHHHHHHHhC
Confidence 9999999999999999743
No 33
>PRK07638 acyl-CoA synthetase; Validated
Probab=98.56 E-value=2.4e-06 Score=90.64 Aligned_cols=128 Identities=16% Similarity=0.081 Sum_probs=87.6
Q ss_pred EEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC---cccceeeecCCCceeEEEeCCCCCccccccc
Q 012409 185 GIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP---PELATFAVLPNIGYFEFIPQRLGNLESQVLC 259 (464)
Q Consensus 185 ~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~---~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~ 259 (464)
.+.+|+ ...-..++++.+|+++++ +.||+||+.......+... +...+. .+|+ ...+.++.+
T Consensus 258 ~~~~G~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~---------- 324 (487)
T PRK07638 258 IISSGAKWEAEAKEKIKNIFPYAKLY-EFYGASELSFVTALVDEESERRPNSVGR-PFHN-VQVRICNEA---------- 324 (487)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCeEE-EEecCCccCceEEecccccCCCCCCCCc-ccCC-cEEEEECCC----------
Confidence 555664 335567788888899998 8999999854332221110 111221 2233 344555422
Q ss_pred CCCcccccccccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeee
Q 012409 260 IEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDK 323 (464)
Q Consensus 260 ~~~~~l~l~eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEk 323 (464)
+ .+++.|+.+||++++. .|+| .|++||+.++. ....+.|+||.++++++.|++
T Consensus 325 --g-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~d----~~g~l~i~GR~~d~i~~~G~~ 393 (487)
T PRK07638 325 --G-----EEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDVGYED----EEGFIYIVGREKNMILFGGIN 393 (487)
T ss_pred --C-----CCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCccEeEc----CCCeEEEEecCCCeEEeCCEE
Confidence 2 2467899999999763 4444 37899998887 556899999999999999999
Q ss_pred cCHHHHHHHHHHH
Q 012409 324 NTEKDLQLSVDEA 336 (464)
Q Consensus 324 v~e~~v~~av~~a 336 (464)
++..+|++++.+.
T Consensus 394 v~~~eiE~~l~~~ 406 (487)
T PRK07638 394 IFPEEIESVLHEH 406 (487)
T ss_pred ECHHHHHHHHHhC
Confidence 9999999999743
No 34
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.55 E-value=4.4e-06 Score=90.00 Aligned_cols=132 Identities=10% Similarity=0.065 Sum_probs=80.9
Q ss_pred cccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHH
Q 012409 269 EVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 332 (464)
Q Consensus 269 eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~a 332 (464)
.++.|+.+||+++.. .|+| .|++||+.++. ..-.+.|+||.++++++.|++++..+|+++
T Consensus 380 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 380 VLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLT----EEGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEe----cCCEEEEEccccceEEECCEecCHHHHHHH
Confidence 356899999999653 3443 39999999986 345789999999999999999999999999
Q ss_pred HHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCCChHHHHHHHHHHHhhccCcchHhhhhcCccCCeEEEEec
Q 012409 333 VDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSARKVNAIGPLELRVVL 412 (464)
Q Consensus 333 v~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~~l~n~~Y~~~R~~g~l~pl~v~~v~ 412 (464)
+.+...+- ...+.- +..+.........+++|.....+...+..+...+.+.+ +......|-.|.+++
T Consensus 456 l~~~~~v~---~~~vv~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l--------~~~~~~~p~~v~~v~ 522 (545)
T PRK07768 456 AARVEGVR---PGNAVA--VRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAHEV--------VAEVGVRPRNVVVLG 522 (545)
T ss_pred HHhCcccc---cceEEE--EEecCCCCceEEEEEEEecccccHHHHHHHHHHHHHHH--------HHHhCCCccEEEEeC
Confidence 98642210 111111 11111111124566677543333333344444444332 222225666788887
Q ss_pred cchHH
Q 012409 413 KGTFQ 417 (464)
Q Consensus 413 ~GtF~ 417 (464)
.+.|.
T Consensus 523 ~~~lP 527 (545)
T PRK07768 523 PGSIP 527 (545)
T ss_pred CCcCC
Confidence 66654
No 35
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=98.54 E-value=5.3e-06 Score=89.09 Aligned_cols=132 Identities=14% Similarity=0.180 Sum_probs=84.2
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
++++ ++..|+ ......++++.+ +++++ ..||+||+.+....-... .....+..+.++ ...++++.+
T Consensus 299 ~~lr---~~~~gG~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~-~~v~i~d~~-- 370 (527)
T TIGR02275 299 SSLK---LLQVGGAKFSEAAARRVPAVF-GCQLQ-QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPD-DEVRVVDDH-- 370 (527)
T ss_pred cceE---EEEEcCCCCCHHHHHHHHHHh-CCeEE-eeeccCccCccccCCCCccccccccCCCCCCCC-ceEEEECCC--
Confidence 4555 555554 234456666767 78888 999999975443211000 001122211111 122233211
Q ss_pred CcccccccCCCcccccccccCCCeEEEEecc---cCceee--------------eeeCCEEEEecccCCCcEEEEEeecC
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
++ .++.|+.+||+++. ..|+|. |++||+.++. ....+.|+||.+
T Consensus 371 ----------g~-----~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~----~~g~l~~~gR~~ 431 (527)
T TIGR02275 371 ----------GN-----PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLT----PEGYIVVVGRAK 431 (527)
T ss_pred ----------CC-----CCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEc----CCccEEEEeccc
Confidence 21 35689999999964 244442 9999999987 456788999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~a 336 (464)
+++++.|+|+++.+|++++.+.
T Consensus 432 d~i~~~G~~v~~~eiE~~l~~~ 453 (527)
T TIGR02275 432 DQINRGGEKIAAEEIENLLLAH 453 (527)
T ss_pred ceeecCCEEECHHHHHHHHHhC
Confidence 9999999999999999998743
No 36
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.53 E-value=7.2e-07 Score=96.70 Aligned_cols=131 Identities=17% Similarity=0.251 Sum_probs=86.6
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC--CcccceeeecCCCceeEEEeCCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
.+.++ ++..|+ ...-.+++++.+ +++++ ..||+||+...+...+.. .+...+. .+|+ ...+.++.+
T Consensus 325 ~~~lr---~v~~gG~~~~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~-- 395 (562)
T PRK05677 325 FSALK---LTLSGGMALQLATAERWKEVT-GCAIC-EGYGMTETSPVVSVNPSQAIQVGTIGI-PVPS-TLCKVIDDD-- 395 (562)
T ss_pred hhhce---EEEEcCccCCHHHHHHHHHHc-CCCee-ccCCccccCcceeecCccCCCCCccCc-cCCC-CEEEEECCC--
Confidence 34666 444443 334556677766 78988 999999984322222111 1112221 2232 234444322
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Cceee--------------eeeCCEEEEecccCCCcEEEEEeecC
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
+ .++..|+.+||++++. .|+|. |++||+.++. ..-.+.|.||.+
T Consensus 396 ----------~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~----~~G~l~i~GR~~ 456 (562)
T PRK05677 396 ----------G-----NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQ----EDGYMRIVDRKK 456 (562)
T ss_pred ----------C-----CCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEEC----CCCcEEEEecCc
Confidence 1 2366899999999653 44442 8999999998 446789999999
Q ss_pred ceeeeeeeecCHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~ 335 (464)
+++++.|++++..+|++++.+
T Consensus 457 d~i~~~G~~i~p~eiE~~l~~ 477 (562)
T PRK05677 457 DMILVSGFNVYPNELEDVLAA 477 (562)
T ss_pred CeEEeCCEEECHHHHHHHHHh
Confidence 999999999999999999974
No 37
>PLN02654 acetate-CoA ligase
Probab=98.53 E-value=4.3e-05 Score=85.18 Aligned_cols=158 Identities=11% Similarity=0.085 Sum_probs=92.0
Q ss_pred ccCCCeEEEEecc-----cCceee----------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHH
Q 012409 270 VKVGEEYEIIVTN-----VAGLYR----------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKD 328 (464)
Q Consensus 270 ve~G~~YelVvTt-----~~GLyR----------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~ 328 (464)
++.|+.+||++.. ..|+|+ |++||+.++. ..-.+.|+||.++++++.|++++..+
T Consensus 475 ~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d----~dG~l~i~GR~dd~I~~~G~ri~p~E 550 (666)
T PLN02654 475 IEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRD----KDGYYWLTGRVDDVINVSGHRIGTAE 550 (666)
T ss_pred CCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEEC----CCCcEEEeeeccCeEEeCCEEECHHH
Confidence 5567889999975 134432 8999999987 45679999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCceEEeEEEe-ecCCCCCceEEEEEEecCC--CChHHHHHHHHHHHhhccCcchHhhhhcCccCC
Q 012409 329 LQLSVDEAAQLLAEEKQEVVDFTSH-VDLSTDPGHYVIFWEVSGE--VNDEVLKECCNCLDRSFVDAGYVSARKVNAIGP 405 (464)
Q Consensus 329 v~~av~~a~~~l~~~~~~l~~f~~~-~~~~~~p~hY~~~~E~~~~--~~~~~l~~~~~~ld~~l~n~~Y~~~R~~g~l~p 405 (464)
|+.++.+.. .|.+-.++ .+.....-.-+.|+.+... .+++..+++...+.+.+ .....|
T Consensus 551 IE~~l~~~p--------~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L----------~~~~~P 612 (666)
T PLN02654 551 VESALVSHP--------QCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQI----------GAFAAP 612 (666)
T ss_pred HHHHHHhCC--------CeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhC----------CCCcCC
Confidence 999998541 23343332 2211111123456655432 22332334444443332 111234
Q ss_pred eEEEEec---cchHHHHHHHHh---cCCCCCCCCCcCcccCCCCHhHHHHHhc
Q 012409 406 LELRVVL---KGTFQQILDHYL---GLGAALSQFKTPRCVGPTNKTVLQILCN 452 (464)
Q Consensus 406 l~v~~v~---~GtF~~~~~~~~---~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 452 (464)
-.|.+|+ ...=.+.++..+ .+|. ..+.+.+.-+. |++.++.+.+
T Consensus 613 ~~i~~v~~lP~T~sGKi~r~~l~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ 662 (666)
T PLN02654 613 DKIHWAPGLPKTRSGKIMRRILRKIASRQ-LDELGDTSTLA--DPGVVDQLIA 662 (666)
T ss_pred CEEEECCCCCCCCCcCchHHHHHHHHcCC-CCCCCCccccc--CHHHHHHHHH
Confidence 4566652 111112333322 2342 22667788888 9999886543
No 38
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.52 E-value=6e-06 Score=87.52 Aligned_cols=151 Identities=20% Similarity=0.193 Sum_probs=95.4
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC--
Q 012409 152 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL-- 227 (464)
Q Consensus 152 ~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~-- 227 (464)
.|..+..|.+...+. ...+++++. ++.+|. ....++.+.+.+ +++++ ..||+||...........
T Consensus 262 ~p~~~~~l~~~~~~~-------~~~~~~l~~--v~~~Ge~l~~~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~ 330 (521)
T PRK06187 262 VPTIWQMLLKAPRAY-------FVDFSSLRL--VIYGGAALPPALLREFKEKF-GIDLV-QGYGMTETSPVVSVLPPEDQ 330 (521)
T ss_pred hHHHHHHHHcCcCCC-------ccCcchhhE--EEEcCcCCCHHHHHHHHHHh-Ccchh-eeeccCccCcccccCCcccc
Confidence 366666665544321 234567773 444553 345667777777 88998 899999973211111110
Q ss_pred ------CcccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccccC--CCeEEEEeccc---Ccee-e-------
Q 012409 228 ------PPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKV--GEEYEIIVTNV---AGLY-R------- 288 (464)
Q Consensus 228 ------~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~--G~~YelVvTt~---~GLy-R------- 288 (464)
.....+ ...|+ ..++.++++ ++ ++.. |+.+||++++. .|++ |
T Consensus 331 ~~~~~~~~~~~G-~~~~~-~~~~i~~~~------------~~-----~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~ 391 (521)
T PRK06187 331 LPGQWTKRRSAG-RPLPG-VEARIVDDD------------GD-----ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAET 391 (521)
T ss_pred cccccccCCccc-cccCC-eEEEEECCC------------CC-----CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHH
Confidence 000111 11222 234444432 11 2445 99999999875 4433 3
Q ss_pred -----eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 289 -----YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 289 -----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
|++||++++. ....+.+.||.+++++++|.+++..+|++++.+.
T Consensus 392 ~~~~~~~tGD~~~~~----~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~ 440 (521)
T PRK06187 392 IDGGWLHTGDVGYID----EDGYLYITDRIKDVIISGGENIYPRELEDALYGH 440 (521)
T ss_pred hhCCceeccceEEEc----CCCCEEEeecccceEEcCCeEECHHHHHHHHHhC
Confidence 9999999987 3457889999999999999999999999988743
No 39
>PRK06145 acyl-CoA synthetase; Validated
Probab=98.52 E-value=4.4e-06 Score=88.63 Aligned_cols=132 Identities=13% Similarity=0.117 Sum_probs=88.2
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCC---CC-CcccceeeecCCCceeEEEeCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP---SL-PPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~---~~-~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
++++ ++.+|+ ....++.+++.+++++++ +.||+||+........ .. .+...+. ..|+ .-.+.++.+
T Consensus 264 ~~l~---~~~~gG~~~~~~~~~~~~~~~~~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~~~~- 336 (497)
T PRK06145 264 DSLA---WCIGGGEKTPESRIRDFTRVFTRARYI-DAYGLTETCSGDTLMEAGREIEKIGSTGR-ALAH-VEIRIADGA- 336 (497)
T ss_pred ccce---EEEecCCCCCHHHHHHHHHHcCCCceE-EeecCcccCCcceeccCccccccCCCccc-CCCC-ceEEEECCC-
Confidence 5666 444443 335667788888889988 9999999854321110 00 1111221 2222 223333321
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Cceee-------------eeeCCEEEEecccCCCcEEEEEeecC
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
. .++..|+.+||++++. .|+|. |++||+++.. ..-.+.|+||.+
T Consensus 337 -----------~-----~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~----~~g~l~~~GR~~ 396 (497)
T PRK06145 337 -----------G-----RWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDVGYLD----EEGFLYLTDRKK 396 (497)
T ss_pred -----------C-----CCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccceEEEc----CCCcEEEecccc
Confidence 1 2356799999999663 56663 9999999987 445789999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~a 336 (464)
+++++.|+++...+|++++.+.
T Consensus 397 ~~i~~~G~~v~~~~IE~~l~~~ 418 (497)
T PRK06145 397 DMIISGGENIASSEVERVIYEL 418 (497)
T ss_pred ceEEeCCeEECHHHHHHHHHhC
Confidence 9999999999999999999854
No 40
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.51 E-value=9.3e-06 Score=86.13 Aligned_cols=132 Identities=16% Similarity=0.148 Sum_probs=83.6
Q ss_pred CCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC-----cccceeeecCCCceeEEEeCCC
Q 012409 178 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP-----PELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 178 P~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~-----~~~~~~~l~~~~~ffEFip~~~ 250 (464)
++++ .++.+|. ....++++++.++..+++ ..||+||+........... +...+ ...++ ..++.++.+
T Consensus 281 ~~l~--~v~~~g~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG-~~~~~-~~~~i~d~~- 354 (513)
T PRK07656 281 SSLR--LAVTGAASMPVALLERFESELGVDIVL-TGYGLSEASGVTTFNRLDDDRKTVAGTIG-TAIAG-VENKIVNEL- 354 (513)
T ss_pred ccee--eEEecCCCCCHHHHHHHHHHcCCCceE-eEEccccCCCceeecCccccccccCCCcc-ccCCC-cEEEEECCC-
Confidence 4566 2333442 335557777777433777 9999999832111111100 11111 12222 233444322
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEecccC---cee----------e----eeeCCEEEEecccCCCcEEEEEeec
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA---GLY----------R----YRLGDVVKVMGFHNSTPELKFICRR 313 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~---GLy----------R----Yr~GDvV~v~gf~~~~P~i~f~gR~ 313 (464)
+ ..++.|+.+||++++.. |+| + |++||+.+.. ....+.++||.
T Consensus 355 -----------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~----~~g~~~~~GR~ 414 (513)
T PRK07656 355 -----------G-----EEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLD----EEGYLYIVDRK 414 (513)
T ss_pred -----------C-----CCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEc----CCeeEEEEecc
Confidence 2 24678999999997652 333 2 8999999886 45678999999
Q ss_pred CceeeeeeeecCHHHHHHHHHH
Q 012409 314 NLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 314 ~~~l~v~GEkv~e~~v~~av~~ 335 (464)
++++++.|++++..+|++++.+
T Consensus 415 ~d~i~~~G~~v~~~~iE~~l~~ 436 (513)
T PRK07656 415 KDMFIVGGFNVYPAEVEEVLYE 436 (513)
T ss_pred cceEEeCCEEeCHHHHHHHHHh
Confidence 9999999999999999999974
No 41
>PLN03051 acyl-activating enzyme; Provisional
Probab=98.51 E-value=4.4e-06 Score=89.39 Aligned_cols=44 Identities=16% Similarity=0.153 Sum_probs=39.9
Q ss_pred eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 012409 288 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 288 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
.|+|||+.++. ..-.+.|+||.++++++.|++++..||++++.+
T Consensus 358 ~~~TGDlg~~d----~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~ 401 (499)
T PLN03051 358 LRRHGDIMKRT----PGGYFCVQGRADDTMNLGGIKTSSVEIERACDR 401 (499)
T ss_pred eeecCCeEEEC----CCCcEEEEeccCCEEeeCCEECCHHHHHHHHHh
Confidence 38999999987 445799999999999999999999999999974
No 42
>PRK06164 acyl-CoA synthetase; Validated
Probab=98.50 E-value=7.5e-06 Score=87.99 Aligned_cols=120 Identities=18% Similarity=0.177 Sum_probs=78.2
Q ss_pred HHHHHHHHHhCCCCeeccccccccceeeecCCCCCCc-----ccceeeecCCCceeEEEeCCCCCcccccccCCCccccc
Q 012409 193 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP-----ELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGL 267 (464)
Q Consensus 193 ~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~-----~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l 267 (464)
...+.++.. +++++ ..||+||+...+........ ...+..+.++ ...++++++ +++
T Consensus 310 ~~~~~~~~~--~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~i~d~~-----------~~~---- 370 (540)
T PRK06164 310 ELAALARAR--GVPLT-GLYGSSEVQALVALQPATDPVSVRIEGGGRPASPE-ARVRARDPQ-----------DGA---- 370 (540)
T ss_pred HHHHHHhhc--CCcee-cceeeccccceeeccCCCCCCcceeccCccccCCC-eEEEEecCC-----------CCc----
Confidence 334444433 68888 99999998543322211100 0112211122 234555433 122
Q ss_pred ccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHH
Q 012409 268 TEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQ 330 (464)
Q Consensus 268 ~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~ 330 (464)
.++.|+.+||++++. .|+| -|++||+.++. ..-.+.|+||.++++++.|++++..+|+
T Consensus 371 -~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~----~~g~l~~~GR~~~~i~~~G~~i~p~eIE 445 (540)
T PRK06164 371 -LLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTR----GDGQFVYQTRMGDSLRLGGFLVNPAEIE 445 (540)
T ss_pred -CCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEc----CCceEEEEeecCCeEEECCEEcCHHHHH
Confidence 356899999999873 3332 28999999887 4457889999999999999999999999
Q ss_pred HHHHHH
Q 012409 331 LSVDEA 336 (464)
Q Consensus 331 ~av~~a 336 (464)
+++.+.
T Consensus 446 ~~l~~~ 451 (540)
T PRK06164 446 HALEAL 451 (540)
T ss_pred HHHHhC
Confidence 999743
No 43
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=98.49 E-value=1.2e-05 Score=85.36 Aligned_cols=134 Identities=17% Similarity=0.288 Sum_probs=86.3
Q ss_pred cCCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCC-------CCCcccceeeecCCCceeEEE
Q 012409 176 LFPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP-------SLPPELATFAVLPNIGYFEFI 246 (464)
Q Consensus 176 lWP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~-------~~~~~~~~~~l~~~~~ffEFi 246 (464)
-+|.++ ..+.+|. .....+++.+.+++++++ ..||+||+..++.... .+.....++ ..|+. |..
T Consensus 256 ~~~~l~--~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~-~~~~~---~~~ 328 (502)
T TIGR01734 256 NYPHLT--HFLFCGEELPVKTAKALLERFPKATIY-NTYGPTEATVAVTSVKITQEILDQYPRLPIGF-AKPDM---NLF 328 (502)
T ss_pred cCCccc--EEEEcCCcCCHHHHHHHHHHCCCcEEE-eCccCCcceEEEEEEEccccccccCCcccccc-ccCCC---EEE
Confidence 356777 3344453 345667777888889988 9999999643332110 000000111 11221 221
Q ss_pred eCCCCCcccccccCCCcccccccccCCCeEEEEeccc---Ccee-----------------eeeeCCEEEEecccCCCcE
Q 012409 247 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-----------------RYRLGDVVKVMGFHNSTPE 306 (464)
Q Consensus 247 p~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy-----------------RYr~GDvV~v~gf~~~~P~ 306 (464)
-.+ + ++ ..+.+|+.+||++.+. .|+| -|++||+.+++ .. .
T Consensus 329 i~~--~--------~~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~----~~-~ 388 (502)
T TIGR01734 329 IMD--E--------EG-----EPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTIT----DG-Q 388 (502)
T ss_pred EEC--C--------CC-----CCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEE----CC-E
Confidence 112 0 11 2356899999999653 3333 38999999987 33 9
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 307 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 307 i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
+.|+||.++++++.|+|++..+|++++.+.
T Consensus 389 l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~ 418 (502)
T TIGR01734 389 LFYQGRLDFQIKLHGYRIELEDIEFNLRQS 418 (502)
T ss_pred EEEeccccCeEEECcEEeCHHHHHHHHHcC
Confidence 999999999999999999999999999854
No 44
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=98.49 E-value=3e-05 Score=85.54 Aligned_cols=133 Identities=11% Similarity=0.039 Sum_probs=83.2
Q ss_pred CCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeec-CCCCC-----CcccceeeecCCCceeEEEeCC
Q 012409 178 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN-VNPSL-----PPELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 178 P~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~-~~~~~-----~~~~~~~~l~~~~~ffEFip~~ 249 (464)
+.|+ .++.+|. .......+++.+ +.+++ +.||+||....+. ..+.. .++..+ ..+|+. -...++.+
T Consensus 354 ~~lr--~~~~gGe~l~~~~~~~~~~~~-~~~~~-~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G-~p~~g~-~v~i~d~~ 427 (628)
T TIGR02316 354 SSLH--WLFLAGEPLDEPTAHWITDGL-GKPVI-DNYWQTETGWPVLAIMPGLDLKPVKLGSPG-LPMYGY-HLRVLDEA 427 (628)
T ss_pred ccee--EEEEecCCCCHHHHHHHHHHh-CCCEE-ecccccccCceeecCCCCCCcCCCCCCCcc-cCcCCc-eEEEEECC
Confidence 5666 2333442 234456666667 67888 9999999753221 11110 011111 122222 12333322
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEeccc------Ccee-----------------eeeeCCEEEEecccCCCcE
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV------AGLY-----------------RYRLGDVVKVMGFHNSTPE 306 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~------~GLy-----------------RYr~GDvV~v~gf~~~~P~ 306 (464)
++ .++..|+.+||+++.. .|+| .|++||+.++. ..-.
T Consensus 428 -----------~g-----~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d----~dG~ 487 (628)
T TIGR02316 428 -----------TG-----RPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRD----EDGY 487 (628)
T ss_pred -----------CC-----CCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEc----CCCc
Confidence 12 2356899999999753 2333 39999999987 4457
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 307 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 307 i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
+.|+||.++++++.|+++...+|+.+|.+.
T Consensus 488 l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~ 517 (628)
T TIGR02316 488 TFILGRTDDVINVAGHRLGTREIEESVSSH 517 (628)
T ss_pred EEEEEcCcceEEeCCEEeCHHHHHHHHHhC
Confidence 899999999999999999999999999743
No 45
>PRK06839 acyl-CoA synthetase; Validated
Probab=98.49 E-value=7.5e-06 Score=86.59 Aligned_cols=131 Identities=11% Similarity=0.150 Sum_probs=83.1
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceee-ecCCCCC---CcccceeeecCCCceeEEEeCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPSL---PPELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~g-i~~~~~~---~~~~~~~~l~~~~~ffEFip~~ 249 (464)
.+.++ .+..|+ .....+.+++. ++++. ..||+||+... ....... .+...+. .+|+. -++.++.+
T Consensus 263 ~~~lr---~~~~gG~~~~~~~~~~~~~~--g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-p~~~~-~~~i~d~~ 334 (496)
T PRK06839 263 LQSVR---WFYNGGAPCPEELMREFIDR--GFLFG-QGFGMTETSPTVFMLSEEDARRKVGSIGK-PVLFC-DYELIDEN 334 (496)
T ss_pred Ccccc---eEEECCCCCCHHHHHHHHHh--CCeeE-eeccCCCCCcceEecccccccccCCCCcc-cCCCc-eEEEECCC
Confidence 34555 444443 34556666654 68888 99999997531 1111110 0111111 12221 23333322
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEecccC---ceee-------------eeeCCEEEEecccCCCcEEEEEeec
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA---GLYR-------------YRLGDVVKVMGFHNSTPELKFICRR 313 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~---GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~ 313 (464)
+ .++..|+.+||++++.. |+|. |++||+.+.. ....+.|+||.
T Consensus 335 ------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~~~~~GR~ 393 (496)
T PRK06839 335 ------------K-----NKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDLARVD----EDGFVYIVGRK 393 (496)
T ss_pred ------------c-----CCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCeeecceEEEc----CCCcEEEeccc
Confidence 1 12678999999997653 3332 8999999986 44578899999
Q ss_pred CceeeeeeeecCHHHHHHHHHHH
Q 012409 314 NLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 314 ~~~l~v~GEkv~e~~v~~av~~a 336 (464)
+++++..|+|+++.+|++++.+.
T Consensus 394 ~d~i~~~G~~v~p~~iE~~l~~~ 416 (496)
T PRK06839 394 KEMIISGGENIYPLEVEQVINKL 416 (496)
T ss_pred cceEEECCEEECHHHHHHHHHhC
Confidence 99999999999999999999743
No 46
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.48 E-value=6.1e-06 Score=96.58 Aligned_cols=133 Identities=15% Similarity=0.182 Sum_probs=88.2
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeecccccccccee--eecCCCC----------CCcccceeeecCCCc
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI--GANVNPS----------LPPELATFAVLPNIG 241 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~--gi~~~~~----------~~~~~~~~~l~~~~~ 241 (464)
.|+++ .+.+|+ ....++++++.+ +++++ +.||+||+.. ..+.... +.+...+ ..+|+.
T Consensus 897 ~~~lr---~~~~gg~~~~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG-~p~~~~- 969 (1146)
T PRK08633 897 FASLR---LVVAGAEKLKPEVADAFEEKF-GIRIL-EGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVG-MPLPGV- 969 (1146)
T ss_pred CCCee---eEEEcCCcCCHHHHHHHHHHh-CCCee-cccccccCcceEEEecCcccccccccccCCCCCCcc-ccCCCC-
Confidence 46676 555554 335567777777 78888 9999999632 2221110 0111122 122322
Q ss_pred eeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEeccc---Ccee-----------------eeeeCCEEEEeccc
Q 012409 242 YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-----------------RYRLGDVVKVMGFH 301 (464)
Q Consensus 242 ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy-----------------RYr~GDvV~v~gf~ 301 (464)
-.+.++++ ++ .++++|+.+||+++.. .|+| .|++||+.++.
T Consensus 970 ~v~i~d~~-----------~~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~--- 1030 (1146)
T PRK08633 970 AVRIVDPE-----------TF-----EELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLD--- 1030 (1146)
T ss_pred EEEEEcCC-----------CC-----ccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEc---
Confidence 23444333 12 2467899999999653 3444 38999999998
Q ss_pred CCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 302 NSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 302 ~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
....+.|+||.++++++.|++++..+|++++.+.
T Consensus 1031 -~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~ 1064 (1146)
T PRK08633 1031 -EDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKA 1064 (1146)
T ss_pred -CCceEEEEecccchhhhCcEEECHHHHHHHHHhc
Confidence 5568999999999999999999999999999854
No 47
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=98.46 E-value=3.7e-06 Score=90.49 Aligned_cols=132 Identities=11% Similarity=0.139 Sum_probs=84.5
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC----CcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL----PPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~----~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
.|+++. ++.+|. ....+.++++.+ +++++ +.||+||+.......+.. .+...+ ...|+ .-.+.++.+
T Consensus 309 ~~~l~~--~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G-~~~~g-~~v~i~~~~- 381 (538)
T TIGR03208 309 VPSLFT--FLCAGAPIPGILVERAWELL-GALIV-SAWGMTENGAVTVTEPDDALEKASTTDG-RPLPG-VEVKVIDAN- 381 (538)
T ss_pred CCcceE--EEEcCCCCCHHHHHHHHHHc-CCeEE-eeeccCcCCCccccCcccchhhccCccc-ccCCC-CEEEEECCC-
Confidence 357772 333442 234455666666 68888 999999973211111110 000111 12233 223333321
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Cceee------------eeeCCEEEEecccCCCcEEEEEeecCc
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR------------YRLGDVVKVMGFHNSTPELKFICRRNL 315 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 315 (464)
+ .+++.|+.+||++++. .|+|. |++||++++. ..-.+.|+||.++
T Consensus 382 -----------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~TGD~~~~~----~~g~l~~~gR~~~ 441 (538)
T TIGR03208 382 -----------G-----AKLSQGETGRLLVRGCSNFGGYLKRPHLNSTDAEGWFDTGDLAFQD----AEGYIRINGRSKD 441 (538)
T ss_pred -----------C-----CCCcCCCCcEEEEecCcccccccCCcccccccCCCceeccceEEEC----CCCcEEEEeccCc
Confidence 2 2356899999999664 45552 9999999986 4457999999999
Q ss_pred eeeeeeeecCHHHHHHHHHH
Q 012409 316 LLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 316 ~l~v~GEkv~e~~v~~av~~ 335 (464)
++++.|+|+.+.+|+.++.+
T Consensus 442 ~i~~~G~~v~p~eIE~~l~~ 461 (538)
T TIGR03208 442 VIIRGGENIPVVEIENLLYQ 461 (538)
T ss_pred eEEECCEEECHHHHHHHHhc
Confidence 99999999999999999974
No 48
>PLN02614 long-chain acyl-CoA synthetase
Probab=98.46 E-value=7.2e-07 Score=99.36 Aligned_cols=134 Identities=17% Similarity=0.263 Sum_probs=85.1
Q ss_pred CCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCC-CCC--CcccceeeecCCCceeEEEeCCCCC
Q 012409 178 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PSL--PPELATFAVLPNIGYFEFIPQRLGN 252 (464)
Q Consensus 178 P~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~-~~~--~~~~~~~~l~~~~~ffEFip~~~~~ 252 (464)
++|+ .+.+|+ ...-..++.+.+++++++ ++||+||+....... +.. .+..+|- .+|+.. .-+++++ +
T Consensus 386 ~~lr---~~~~Gga~l~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~~~~~~gsvG~-p~pg~e-vki~d~~--~ 457 (666)
T PLN02614 386 GNVR---IILSGAAPLASHVESFLRVVACCHVL-QGYGLTESCAGTFVSLPDELDMLGTVGP-PVPNVD-IRLESVP--E 457 (666)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHhcCCCEE-eeCchHhhhhheeeeccccCCcCCcccC-cCCceE-EEEeeec--c
Confidence 3566 334443 333345566667678998 999999974322111 110 1112221 233321 2233322 1
Q ss_pred cccccccCCCcccccccccCCCeEEEEecc---cCceee-------------eeeCCEEEEecccCCCcEEEEEeecCce
Q 012409 253 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNLL 316 (464)
Q Consensus 253 ~~~~~~~~~~~~l~l~eve~G~~YelVvTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~ 316 (464)
. .. .+++.|+.+||+|.. ..|+|+ |+|||+.+++ ..-.+.|+||.+++
T Consensus 458 ~-------~~-----~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d----~dG~l~i~gR~kd~ 521 (666)
T PLN02614 458 M-------EY-----DALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQ----PNGSMKIIDRKKNI 521 (666)
T ss_pred c-------Cc-----ccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEc----CCCCEEEEEcchhc
Confidence 1 11 235679999999943 467775 8999999997 44579999999999
Q ss_pred eee-eeeecCHHHHHHHHHH
Q 012409 317 LTI-NIDKNTEKDLQLSVDE 335 (464)
Q Consensus 317 l~v-~GEkv~e~~v~~av~~ 335 (464)
+++ .||+|++.+|++++.+
T Consensus 522 ik~~~G~~V~p~eIE~~l~~ 541 (666)
T PLN02614 522 FKLSQGEYVAVENIENIYGE 541 (666)
T ss_pred eecCCCeeecHHHHHHHHhc
Confidence 997 6999999999999874
No 49
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=98.45 E-value=2.1e-06 Score=88.17 Aligned_cols=134 Identities=19% Similarity=0.246 Sum_probs=87.0
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeec---CCCCCCc----ccceeeecCCCceeEEEe
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN---VNPSLPP----ELATFAVLPNIGYFEFIP 247 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~---~~~~~~~----~~~~~~l~~~~~ffEFip 247 (464)
.++++. ++.+|+ ....++.+++.++++++. ..||+||+...+. ....... ...+ ...|+. ....++
T Consensus 233 ~~~l~~--v~~~g~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G-~~~~~~-~~~i~~ 307 (408)
T TIGR01733 233 LASLRL--VILGGEALTPALVDRWRARGPGARLI-NLYGPTETTVWSTATLVDADDAPRESPVPIG-RPLANT-RLYVLD 307 (408)
T ss_pred ccCceE--EEEeCccCCHHHHHHHHHhCCCcEEE-ecccCCceEEEEEEEEcCccccCCccccccC-cccCCc-eEEEEC
Confidence 456773 333442 446677888888778998 9999999854221 1111100 0011 112221 122222
Q ss_pred CCCCCcccccccCCCcccccccccCCCeEEEEeccc---Ccee----------------------eeeeCCEEEEecccC
Q 012409 248 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY----------------------RYRLGDVVKVMGFHN 302 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy----------------------RYr~GDvV~v~gf~~ 302 (464)
.+ . .+++.|+.+||+++.. .|+| .|++||+.++.
T Consensus 308 ~~------------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d---- 366 (408)
T TIGR01733 308 DD------------L-----RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYL---- 366 (408)
T ss_pred CC------------C-----CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEc----
Confidence 11 1 2366899999999763 3343 59999999987
Q ss_pred CCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 303 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 303 ~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
..-++.|+||.++++++.|+|+++.+|++++...
T Consensus 367 ~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~ 400 (408)
T TIGR01733 367 PDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRH 400 (408)
T ss_pred CCCCEEEeeccCCEEEeCeEEechHHHHHHHhcC
Confidence 3356999999999999999999999999999743
No 50
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=98.44 E-value=5e-06 Score=89.77 Aligned_cols=122 Identities=17% Similarity=0.214 Sum_probs=81.1
Q ss_pred HHHHHHHHHHhCCCCeeccccccccce-eeecCC-CCC-----CcccceeeecCCCceeEEEeCCCCCcccccccCCCcc
Q 012409 192 EHYLKKLRHYAGDLPLMSADYGSSEGW-IGANVN-PSL-----PPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKP 264 (464)
Q Consensus 192 ~~Y~~~l~~~~~~~~~~~~~y~aSEg~-~gi~~~-~~~-----~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~ 264 (464)
...++++++.+++++++ +.||+||+. +++... +.. .+...+. .+|+. =.++++.+ .+
T Consensus 317 ~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~-~~~~~-~v~i~d~~-----------~~-- 380 (546)
T PLN02330 317 PELLTAFEAKFPGVQVQ-EAYGLTEHSCITLTHGDPEKGHGIAKKNSVGF-ILPNL-EVKFIDPD-----------TG-- 380 (546)
T ss_pred HHHHHHHHHHcCCCeEE-ecccccccccceecCCCccccccccccCcccc-ccCCc-EEEEEeCC-----------CC--
Confidence 35667788888899999 999999973 232111 100 0001221 12222 13455433 11
Q ss_pred cccccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHH
Q 012409 265 VGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEK 327 (464)
Q Consensus 265 l~l~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~ 327 (464)
.++++|+.+||+++.. .|+| -|++||+.++. ..-.+.|.||.++++++.|++++..
T Consensus 381 ---~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~----~dG~l~~~GR~~d~i~~~G~~v~~~ 453 (546)
T PLN02330 381 ---RSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYID----DDGDIFIVDRIKELIKYKGFQVAPA 453 (546)
T ss_pred ---ccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEe----CCCcEEEEechHHhhhcCCEEECHH
Confidence 2356899999999642 3443 18999999987 3346889999999999999999999
Q ss_pred HHHHHHHHH
Q 012409 328 DLQLSVDEA 336 (464)
Q Consensus 328 ~v~~av~~a 336 (464)
+|+.++.+.
T Consensus 454 ~iE~~l~~~ 462 (546)
T PLN02330 454 ELEAILLTH 462 (546)
T ss_pred HHHHHHHhC
Confidence 999999743
No 51
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=98.44 E-value=1.3e-05 Score=85.54 Aligned_cols=131 Identities=12% Similarity=0.086 Sum_probs=85.9
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCC---CCcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
++++ .+++|+ ....++++++.+ ++++. ..||+||+....-.... ..+...++ ..|+. -.++++.+
T Consensus 271 ~~l~---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~~~-~~~i~d~~-- 341 (509)
T PRK12406 271 SSLR---HVIHAAAPCPADVKRAMIEWW-GPVIY-EYYGSTESGAVTFATSEDALSHPGTVGK-AAPGA-ELRFVDED-- 341 (509)
T ss_pred Ccee---EEEEcCCCCCHHHHHHHHHHc-CCcEE-eeccccccCceEecCcccccccCCCcCc-cCCCc-EEEEECCC--
Confidence 4566 445443 345667787777 67777 99999998531111110 11112222 23332 23444322
Q ss_pred CcccccccCCCcccccccccCCCeEEEEecccC----ceee-------------eeeCCEEEEecccCCCcEEEEEeecC
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA----GLYR-------------YRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~----GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
+ .+++.|+.+||+++..+ |+|. |++||++++. ..-.+.|+||.+
T Consensus 342 ----------~-----~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~----~~g~~~~~GR~~ 402 (509)
T PRK12406 342 ----------G-----RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLD----ADGYLFLCDRKR 402 (509)
T ss_pred ----------C-----CCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEc----CCceEEEeeccc
Confidence 1 24678999999996532 4442 7899999987 445788999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~a 336 (464)
+++++.|++++..+|++++.+.
T Consensus 403 d~ik~~G~~v~~~~IE~~l~~~ 424 (509)
T PRK12406 403 DMVISGGVNIYPAEIEAVLHAV 424 (509)
T ss_pred ceEEECCEEECHHHHHHHHHhC
Confidence 9999999999999999999743
No 52
>PRK12583 acyl-CoA synthetase; Provisional
Probab=98.44 E-value=1e-05 Score=87.08 Aligned_cols=133 Identities=13% Similarity=0.142 Sum_probs=86.5
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC-----cccceeeecCCCceeEEEeCC
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP-----PELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~-----~~~~~~~l~~~~~ffEFip~~ 249 (464)
+++++ ..+.+|. .....+++.+.+++.++. ..||+||+....-....++ +...+. ..|+ ..++.++.+
T Consensus 316 ~~~lr--~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~~~i~d~~ 390 (558)
T PRK12583 316 LSSLR--TGIMAGAPCPIEVMRRVMDEMHMAEVQ-IAYGMTETSPVSLQTTAADDLERRVETVGR-TQPH-LEVKVVDPD 390 (558)
T ss_pred chhhe--EEEecCCCCCHHHHHHHHHHcCCccee-ccccccccccceeccCcccccccccCCCCc-cCCC-CeEEEECCC
Confidence 46777 2344553 335567777777667777 8999999853221111110 011221 2222 334444322
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEee
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
+ .+++.|+.+||++++. .|+| .|++||+.++. ..-.+.|.||
T Consensus 391 ------------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~----~dg~l~i~GR 449 (558)
T PRK12583 391 ------------G-----ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMD----EQGYVRIVGR 449 (558)
T ss_pred ------------C-----CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEEC----CCccEEEEec
Confidence 1 2467899999999663 3443 28999999986 4457899999
Q ss_pred cCceeeeeeeecCHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
.++++++.|+|++..+|++++.+
T Consensus 450 ~~~~i~~~G~~v~~~~IE~~l~~ 472 (558)
T PRK12583 450 SKDMIIRGGENIYPREIEEFLFT 472 (558)
T ss_pred ccceeEECCEEeCHHHHHHHHHh
Confidence 99999999999999999999874
No 53
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=98.43 E-value=1.4e-05 Score=88.74 Aligned_cols=157 Identities=15% Similarity=0.158 Sum_probs=89.4
Q ss_pred CCCeEEEEeccc-----Ccee------e------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHH
Q 012409 272 VGEEYEIIVTNV-----AGLY------R------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKD 328 (464)
Q Consensus 272 ~G~~YelVvTt~-----~GLy------R------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~ 328 (464)
.|+.+||+++.. .|+| | |++||+.++. ..-.+.|+||.++++++.|++++..+
T Consensus 461 ~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d----~dG~l~i~GR~dd~I~~~G~ri~p~E 536 (652)
T TIGR01217 461 TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLT----PRGGIVIHGRSDSTLNPQGVRMGSAE 536 (652)
T ss_pred CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEEC----CCCcEEEEecccCeEecCCEEcCHHH
Confidence 489999999763 3444 1 7899999997 45679999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCceEEeEEEe-ecCCCCCceEEEEEEecCC--CChHHHHHHHHHHHhhccCcchHhhhhcCccCC
Q 012409 329 LQLSVDEAAQLLAEEKQEVVDFTSH-VDLSTDPGHYVIFWEVSGE--VNDEVLKECCNCLDRSFVDAGYVSARKVNAIGP 405 (464)
Q Consensus 329 v~~av~~a~~~l~~~~~~l~~f~~~-~~~~~~p~hY~~~~E~~~~--~~~~~l~~~~~~ld~~l~n~~Y~~~R~~g~l~p 405 (464)
|++++.+.. .|.+-.++ .+.......-+.|+.+... .+++..+++.+.+.+.+ . .| -.|
T Consensus 537 IE~~l~~~p--------~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l-~-~~--------~~P 598 (652)
T TIGR01217 537 IYNAVERLD--------EVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGL-S-PR--------HVP 598 (652)
T ss_pred HHHHHHhCC--------CcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhC-C-CC--------cCC
Confidence 999998542 23333332 2211111233466766432 23322333433333322 1 11 234
Q ss_pred eEEEEec---cchHHHHHHHHhcCCCCCCCCCcCcccCCCCHhHHHHHhc
Q 012409 406 LELRVVL---KGTFQQILDHYLGLGAALSQFKTPRCVGPTNKTVLQILCN 452 (464)
Q Consensus 406 l~v~~v~---~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~~~~~~~~~~l~~ 452 (464)
-.|.+|+ ...=.+.++..+.+=.....++.+.-+. |++.++...+
T Consensus 599 ~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~~~~~~~~~~--~~~~l~~~~~ 646 (652)
T TIGR01217 599 DEIIEVPGIPHTLTGKRVEVAVKRVLQGTPVDNPGAID--NPELLDLYEE 646 (652)
T ss_pred CEEEECCCCCCCCCccChHHHHHHHHcCCCCCCccccc--CHHHHHHHHH
Confidence 4455543 1111122222222111222456677788 9999886543
No 54
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=98.42 E-value=2.3e-05 Score=83.24 Aligned_cols=133 Identities=20% Similarity=0.286 Sum_probs=84.7
Q ss_pred CCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCCCC
Q 012409 178 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLGN 252 (464)
Q Consensus 178 P~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~ 252 (464)
++++ .++.+|. ...-.+.+++.+++++++ ..||+||+.......+.. .+...+ ...|+. ...+++.+
T Consensus 274 ~~l~--~~~~~g~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG-~~~~~~-~~~i~~~~--- 345 (515)
T TIGR03098 274 PSLR--YLTNSGGAMPRATLSRLRSFLPNARLF-LMYGLTEAFRSTYLPPEEVDRRPDSIG-KAIPNA-EVLVLRED--- 345 (515)
T ss_pred cceE--EEEecCCcCCHHHHHHHHHHCCCCeEe-eeeccccccceEecccccccCCCCCcc-eecCCC-EEEEECCC---
Confidence 4555 2333442 335567778888788888 999999985322222111 011111 222322 23334322
Q ss_pred cccccccCCCcccccccccCCCeEEEEeccc---Ccee-------------------------eeeeCCEEEEecccCCC
Q 012409 253 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------------------RYRLGDVVKVMGFHNST 304 (464)
Q Consensus 253 ~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy-------------------------RYr~GDvV~v~gf~~~~ 304 (464)
++ ++..|+.+|+++.+. .|+| .|++||++++. ..
T Consensus 346 ---------~~-----~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~----~~ 407 (515)
T TIGR03098 346 ---------GS-----ECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRD----EE 407 (515)
T ss_pred ---------CC-----CCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEc----CC
Confidence 22 345688899998553 3443 37899999886 33
Q ss_pred cEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 305 PELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 305 P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
-.+.|.||.++++++.|++++..+|++++.+.
T Consensus 408 g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~ 439 (515)
T TIGR03098 408 GFLYFVGRRDEMIKTSGYRVSPTEVEEVAYAT 439 (515)
T ss_pred ceEEEEeccccceecCCEEeCHHHHHHHHhcC
Confidence 46889999999999999999999999999743
No 55
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.42 E-value=7.4e-06 Score=90.25 Aligned_cols=62 Identities=26% Similarity=0.279 Sum_probs=52.3
Q ss_pred cccCCCeEEEEecc---cCcee-------------------------------eeeeCCEEEEecccCCCcEEEEEeecC
Q 012409 269 EVKVGEEYEIIVTN---VAGLY-------------------------------RYRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 269 eve~G~~YelVvTt---~~GLy-------------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
+++.|+.+||++.. ..|+| -|||||+.++. .-.+.|+||.+
T Consensus 412 ~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-----dG~l~i~GR~~ 486 (631)
T PRK07769 412 ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-----DGELYITGRVK 486 (631)
T ss_pred CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-----CCEEEEEcccc
Confidence 57789999999954 24443 28999999874 24799999999
Q ss_pred ceeeeeeeecCHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~ 335 (464)
+++++.|+++++.+|+.++.+
T Consensus 487 d~Ik~~G~~V~p~eIE~~l~~ 507 (631)
T PRK07769 487 DLVIIDGRNHYPQDLEYTAQE 507 (631)
T ss_pred cEEEECCeeeCHHHHHHHHHh
Confidence 999999999999999999985
No 56
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=98.42 E-value=1.7e-06 Score=93.59 Aligned_cols=127 Identities=19% Similarity=0.188 Sum_probs=83.6
Q ss_pred EEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCCCCcccccc
Q 012409 185 GIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLGNLESQVL 258 (464)
Q Consensus 185 ~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~ 258 (464)
.+.+|+ ....++++++.+ ++++. ..||+||+...+...+.. .+...+. .++ ..-.++++.+
T Consensus 331 ~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-p~~-g~~v~i~d~~--------- 397 (557)
T PRK07059 331 VANGGGMAVQRPVAERWLEMT-GCPIT-EGYGLSETSPVATCNPVDATEFSGTIGL-PLP-STEVSIRDDD--------- 397 (557)
T ss_pred EEEeccccCCHHHHHHHHHHh-CCCee-eccccccccchhhcCCCCCCCcCCcccC-ccC-CcEEEEECCC---------
Confidence 455554 335556777777 79988 999999985433221111 1112222 112 2234444322
Q ss_pred cCCCcccccccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeee
Q 012409 259 CIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINI 321 (464)
Q Consensus 259 ~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~G 321 (464)
++ .+..|+.+||++++. .|+| -|++||+.+.. ..-.+.|+||.++++++.|
T Consensus 398 ---~~-----~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~~~~~GR~~~~i~~~G 465 (557)
T PRK07059 398 ---GN-----DLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMD----ERGYTKIVDRKKDMILVSG 465 (557)
T ss_pred ---CC-----CCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEc----CCCcEEEecccccceEECC
Confidence 21 356899999999763 2332 18999998886 4457899999999999999
Q ss_pred eecCHHHHHHHHHHH
Q 012409 322 DKNTEKDLQLSVDEA 336 (464)
Q Consensus 322 Ekv~e~~v~~av~~a 336 (464)
+++++.+|++++.+.
T Consensus 466 ~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 466 FNVYPNEIEEVVASH 480 (557)
T ss_pred EEEcHHHHHHHHHhC
Confidence 999999999999753
No 57
>PRK13383 acyl-CoA synthetase; Provisional
Probab=98.41 E-value=1.8e-05 Score=84.75 Aligned_cols=131 Identities=15% Similarity=0.140 Sum_probs=84.4
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
.|.++ .+.+|+ ....++++.+.+ +.+++ +.||+||+.......+.. .+...+ ...|+ .-.++++.+
T Consensus 291 ~~~lr---~i~~gG~~l~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~~-~~~~i~d~~- 362 (516)
T PRK13383 291 LPQLR---VVMSSGDRLDPTLGQRFMDTY-GDILY-NGYGSTEVGIGALATPADLRDAPETVG-KPVAG-CPVRILDRN- 362 (516)
T ss_pred CCceE---EEEECCCCCCHHHHHHHHHHc-Cchhh-hcccccccccceeccccccccCCCccc-CCCCC-cEEEEECCC-
Confidence 46666 444443 335567777777 67887 999999985432111110 011111 11222 123444322
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Ccee----------eeeeCCEEEEecccCCCcEEEEEeecCcee
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY----------RYRLGDVVKVMGFHNSTPELKFICRRNLLL 317 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l 317 (464)
+ .++..|+.+||++++. .|++ .|++||+.++. ..-.+.|+||.++++
T Consensus 363 -----------~-----~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~~~d----~~G~l~i~GR~~~~i 422 (516)
T PRK13383 363 -----------N-----RPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMGYLD----NAGRLFIVGREDDMI 422 (516)
T ss_pred -----------C-----CCCCCCCceEEEEecCcccccccCCchhheecCceecceeEEEc----CCccEEEeccccceE
Confidence 2 2356789999999754 3344 36799999987 445788999999999
Q ss_pred eeeeeecCHHHHHHHHHH
Q 012409 318 TINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 318 ~v~GEkv~e~~v~~av~~ 335 (464)
++.|++++..+|++++.+
T Consensus 423 ~~~G~~v~~~eiE~~l~~ 440 (516)
T PRK13383 423 ISGGENVYPRAVENALAA 440 (516)
T ss_pred EECCEEECHHHHHHHHHh
Confidence 999999999999999974
No 58
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.41 E-value=5.6e-06 Score=89.81 Aligned_cols=153 Identities=18% Similarity=0.198 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeecCh---HHHHHHHHHHhCCCCeeccccccccceeeecCCCCC
Q 012409 151 PNPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGSM---EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL 227 (464)
Q Consensus 151 p~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~~---~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~ 227 (464)
-.|....+|...... .-.+.+++++ ++.+|+. ....+++++.++..++. .+||+||+...+-..+..
T Consensus 270 ~vPt~~~~ll~~~~~------~~~~~~~~lr---~~~~gg~~~~~~~~~~~~~~~~~~~i~-~~YG~TE~~~~~~~~~~~ 339 (534)
T COG0318 270 GVPTFLRELLDNPEK------DDDDLSSSLR---LVLSGGAPLPPELLERFEERFGPIAIL-EGYGLTETSPVVTINPPD 339 (534)
T ss_pred cchHHHHHHHhCCcc------CccccccceE---EEEecCCcCCHHHHHHHHHHhCCCceE-EeecccccCceeecCCCc
Confidence 456666655443222 1112322355 7777753 47778888888667788 999999996433222221
Q ss_pred C----cccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEec---ccCceee------------
Q 012409 228 P----PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVT---NVAGLYR------------ 288 (464)
Q Consensus 228 ~----~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvT---t~~GLyR------------ 288 (464)
+ ...++ ...|+ .|..-+++ . +.+ ++ +|+.+||++- -..|+|+
T Consensus 340 ~~~~~~~~~G-~~~pg---~~v~Ivd~--~-------~~~-----~~-pg~vGei~irgp~v~~GY~~~pe~t~~~f~~~ 400 (534)
T COG0318 340 DLLAKPGSVG-RPLPG---VEVRIVDP--D-------GGE-----VL-PGEVGEIWVRGPNVMKGYWNRPEATAEAFDED 400 (534)
T ss_pred hhhhcCCccc-ccCCC---cEEEEEeC--C-------CCc-----cC-CCCceEEEEECchhhhhhcCChHHHHHhhccC
Confidence 1 11122 12222 34444441 1 111 12 2889999993 3466653
Q ss_pred --eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 289 --YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 289 --Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
|+|||+.++. ....+.|+||.+|+++..||++++.+|+.++.+.
T Consensus 401 gW~~TGDlg~~d----~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~ 446 (534)
T COG0318 401 GWLRTGDLGYVD----EDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEH 446 (534)
T ss_pred CeeeecceEEEc----CCccEEEEeccceEEEeCCeEECHHHHHHHHHhC
Confidence 8999999887 3466999999999999999999999999999865
No 59
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.40 E-value=2.6e-06 Score=91.59 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=85.4
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC--CcccceeeecCCCceeEEEeCCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
+++++ ++.+|+ .....+++.+.+ +++++ ..||+||+.......+.. .....+. ..|+. -...++.+
T Consensus 304 ~~~l~---~~~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~G~-~~~g~-~~~i~d~~-- 374 (546)
T PRK08314 304 LSSLR---YIGGGGAAMPEAVAERLKELT-GLDYV-EGYGLTETMAQTHSNPPDRPKLQCLGI-PTFGV-DARVIDPE-- 374 (546)
T ss_pred chhhh---eeeeccccCCHHHHHHHHHHc-CCcEE-ecccccccccceecCCCcCCCCCccCc-ccCCe-EEEEEeCC--
Confidence 45666 444443 234456677777 68888 999999975433221110 0111111 12222 12223322
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Ccee-----------------eeeeCCEEEEecccCCCcEEEEEe
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-----------------RYRLGDVVKVMGFHNSTPELKFIC 311 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy-----------------RYr~GDvV~v~gf~~~~P~i~f~g 311 (464)
++ .+++.|+.+||++... .|+| -|++||++++. ....+.++|
T Consensus 375 ---------~~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~----~~g~l~~~G 436 (546)
T PRK08314 375 ---------TL-----EELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMD----EEGYFFITD 436 (546)
T ss_pred ---------CC-----cCCCCCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEc----CCCcEEEEe
Confidence 12 3467899999999652 3443 48999999886 456789999
Q ss_pred ecCceeeeeeeecCHHHHHHHHHHH
Q 012409 312 RRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 312 R~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
|.++++++.|++++..+|++++.+.
T Consensus 437 R~~d~i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 437 RLKRMINASGFKVWPAEVENLLYKH 461 (546)
T ss_pred cchhhEEeCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999854
No 60
>PLN02246 4-coumarate--CoA ligase
Probab=98.39 E-value=1.9e-05 Score=85.04 Aligned_cols=132 Identities=14% Similarity=0.139 Sum_probs=85.0
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeee--cCC----CC-CCcccceeeecCCCceeEEEe
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGA--NVN----PS-LPPELATFAVLPNIGYFEFIP 247 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi--~~~----~~-~~~~~~~~~l~~~~~ffEFip 247 (464)
+.++ .+..|+ .....+.+++.++++++. ..||+||+...+ +.. +. ..+...+. ..++ .-.+.++
T Consensus 298 ~~lr---~~~~gg~~l~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d 371 (537)
T PLN02246 298 SSIR---MVLSGAAPLGKELEDAFRAKLPNAVLG-QGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGT-VVRN-AELKIVD 371 (537)
T ss_pred ccee---EEEEecCcCCHHHHHHHHHHcCCCeEe-ccccccccCcccccccccCCCCccccCCcccc-ccCC-cEEEEec
Confidence 4565 444443 335567788888888888 899999984321 110 00 00111121 1122 2233443
Q ss_pred CCCCCcccccccCCCcccccccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEE
Q 012409 248 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFI 310 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~ 310 (464)
.+ +. .+++.|+.+||+++.. .|+| -|++||+.++. ..-.+.|+
T Consensus 372 ~~-----------~~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~----~~g~l~~~ 431 (537)
T PLN02246 372 PE-----------TG-----ASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYID----DDDELFIV 431 (537)
T ss_pred CC-----------CC-----CcCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEe----CCCeEEEE
Confidence 22 11 2467899999999642 3443 27899999987 44578999
Q ss_pred eecCceeeeeeeecCHHHHHHHHHH
Q 012409 311 CRRNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 311 gR~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
||.++++++.|++++..+|++++.+
T Consensus 432 GR~dd~i~~~G~~i~~~eIE~~l~~ 456 (537)
T PLN02246 432 DRLKELIKYKGFQVAPAELEALLIS 456 (537)
T ss_pred ecccceEEECCEEECcHHHHHHHHh
Confidence 9999999999999999999999974
No 61
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.38 E-value=2.1e-05 Score=86.14 Aligned_cols=251 Identities=15% Similarity=0.101 Sum_probs=140.3
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeecC---hHHHHHHHHHHhCCCCeecccccccccee-eecCCCCC
Q 012409 152 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSL 227 (464)
Q Consensus 152 ~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~-gi~~~~~~ 227 (464)
.|...+.|++.-.+. ..-.+. +.|+ .|..+|. .+.| ..+.+.++.-|+. +.|+.||+.. -+.-.+..
T Consensus 338 ~pt~~r~l~~~~~~~----~~~~~~-~sLk--~~~S~Gepi~~~~~-ew~~~~~~~~pv~-e~~~qtEtG~~~i~~~~g~ 408 (626)
T KOG1175|consen 338 APTAYRLLRRLGQED----VTSYSL-KSLR--TCGSVGEPINPEAW-EWWKRVTGLDPIY-ETYGQTETGGICITPKPGK 408 (626)
T ss_pred ccHHHHHHHHhcccc----cccccc-ceEE--EEeecCccCCcchH-HHHHHhcCccchh-hceeeeccCceeeeccCCC
Confidence 355565555543331 111222 4466 4445552 3333 6666777444777 9999999832 11111111
Q ss_pred -CcccceeeecCCCc-eeEEEeCCCCCcccccccCCCcccccccccCC-CeEEEEeccc------Cceee----------
Q 012409 228 -PPELATFAVLPNIG-YFEFIPQRLGNLESQVLCIEPKPVGLTEVKVG-EEYEIIVTNV------AGLYR---------- 288 (464)
Q Consensus 228 -~~~~~~~~l~~~~~-ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G-~~YelVvTt~------~GLyR---------- 288 (464)
+. ..++.-.|... ..+.++++ ++ +++.+ +.+||+++.. .++|+
T Consensus 409 ~p~-~pg~~~~p~~g~~v~i~de~------------g~-----~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf 470 (626)
T KOG1175|consen 409 LPI-KPGSAGKPFPGYDVQILDEN------------GN-----ELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYF 470 (626)
T ss_pred CCc-CccccCCCCCCcceEEECCC------------CC-----CcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhc
Confidence 11 12222233332 23333322 22 34444 7899999543 33433
Q ss_pred ------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCce
Q 012409 289 ------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGH 362 (464)
Q Consensus 289 ------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~h 362 (464)
|.+||-.+.+ +.--+.+.||.||++|+.|-+++..||++|+.+-. .|.|=+++.-.....|.
T Consensus 471 ~k~pg~y~tGD~~~rd----~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp--------~VaEsAvVg~p~~~~ge 538 (626)
T KOG1175|consen 471 KKFPGYYFTGDGGRRD----EDGYYWILGRVDDVINVSGHRIGTAEIESALVEHP--------AVAESAVVGSPDPIKGE 538 (626)
T ss_pred ccCCceEEecCceEEc----CCceEEEEecccccccccceeecHHHHHHHHhhCc--------chhheeeecCCCCCCCe
Confidence 9999999998 88899999999999999999999999999997542 23343333211112233
Q ss_pred EE-EEEEecCCCChHHHHHHHHHHHhhccCcchHhhhhc-CccCCeE-EEEe---ccchHHHHHHHHhcCCCCCCCCCcC
Q 012409 363 YV-IFWEVSGEVNDEVLKECCNCLDRSFVDAGYVSARKV-NAIGPLE-LRVV---LKGTFQQILDHYLGLGAALSQFKTP 436 (464)
Q Consensus 363 Y~-~~~E~~~~~~~~~l~~~~~~ld~~l~n~~Y~~~R~~-g~l~pl~-v~~v---~~GtF~~~~~~~~~~G~~~~Q~K~P 436 (464)
-+ .|+=+... .+..+++.++|.... |+. |-+.-|+ |..| +.=..-+.|++++++-.+.-|++-.
T Consensus 539 ~v~aFvvl~~g--~~~~~~L~kel~~~V--------R~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~~~~d~ 608 (626)
T KOG1175|consen 539 VVLAFVVLKSG--SHDPEQLTKELVKHV--------RSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGKAVGDT 608 (626)
T ss_pred EEEEEEEEcCC--CCChHHHHHHHHHHH--------HhhcCcccccceeEecCCCCccccchhHHHHHHHHhccCccccc
Confidence 32 44444332 112333444444443 322 3343343 3333 3333566788777654444488888
Q ss_pred cccCCCCHhHHHHHhcc
Q 012409 437 RCVGPTNKTVLQILCNN 453 (464)
Q Consensus 437 r~~~~~~~~~~~~l~~~ 453 (464)
-.+. |+++++.+.+.
T Consensus 609 st~~--dp~v~~~~~~~ 623 (626)
T KOG1175|consen 609 STLA--DPSVIDHLRSI 623 (626)
T ss_pred cccC--ChHHHHHHHHh
Confidence 8898 99999977654
No 62
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.38 E-value=3.4e-05 Score=81.41 Aligned_cols=64 Identities=20% Similarity=0.159 Sum_probs=53.5
Q ss_pred cccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHH
Q 012409 269 EVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 332 (464)
Q Consensus 269 eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~a 332 (464)
+++.|+.+||++++. .|++ .|++||++++. ....+.|.||.++++++.|++++..+|+++
T Consensus 326 ~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl~~~~----~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~ 401 (483)
T PRK03640 326 VVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDIGYLD----EEGFLYVLDRRSDLIISGGENIYPAEIEEV 401 (483)
T ss_pred cCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccceEEEc----CCCCEEEeecccCeEEeCCEEECHHHHHHH
Confidence 467899999999874 3332 48999999987 445689999999999999999999999999
Q ss_pred HHHH
Q 012409 333 VDEA 336 (464)
Q Consensus 333 v~~a 336 (464)
+.+.
T Consensus 402 i~~~ 405 (483)
T PRK03640 402 LLSH 405 (483)
T ss_pred HHhC
Confidence 9743
No 63
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.38 E-value=2.2e-06 Score=92.80 Aligned_cols=132 Identities=16% Similarity=0.145 Sum_probs=86.7
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCC---CCCCcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN---PSLPPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~---~~~~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
+.++ .+.+|+ ......++++.+ ++++. ..||+||+....... ....+...+ ..+|+.. .+.++.+
T Consensus 323 ~~lr---~v~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~~~~-~~i~~~~-- 393 (563)
T PRK06710 323 SSIR---ACISGSAPLPVEVQEKFETVT-GGKLV-EGYGLTESSPVTHSNFLWEKRVPGSIG-VPWPDTE-AMIMSLE-- 393 (563)
T ss_pred hhhh---heeeCCCcCCHHHHHHHHHhh-CCCEe-cccccccCccccccCcccccccCCccC-CCCCCCe-EEEEECC--
Confidence 5666 344443 334556677767 78888 999999974321110 011111112 2334432 3455433
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Cceee-------------eeeCCEEEEecccCCCcEEEEEeecCc
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNL 315 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 315 (464)
++ ..+..|+.+||++++. .|+|. |++||+++.+ ....+.|+||.++
T Consensus 394 ---------~~-----~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~~~~~GR~dd 455 (563)
T PRK06710 394 ---------TG-----EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMD----EDGFFYVKDRKKD 455 (563)
T ss_pred ---------CC-----ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEc----CCCcEEEeecccc
Confidence 12 2367899999999764 45554 9999998876 4567999999999
Q ss_pred eeeeeeeecCHHHHHHHHHHH
Q 012409 316 LLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 316 ~l~v~GEkv~e~~v~~av~~a 336 (464)
++++.|+|+++.+|++++.+.
T Consensus 456 ~i~~~G~~v~p~eiE~~l~~~ 476 (563)
T PRK06710 456 MIVASGFNVYPREVEEVLYEH 476 (563)
T ss_pred EEEECCEEECHHHHHHHHHhC
Confidence 999999999999999999754
No 64
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=98.36 E-value=1.2e-05 Score=88.24 Aligned_cols=63 Identities=29% Similarity=0.322 Sum_probs=52.5
Q ss_pred cccCCCeEEEEecc---cCcee--------------------------------eeeeCCEEEEecccCCCcEEEEEeec
Q 012409 269 EVKVGEEYEIIVTN---VAGLY--------------------------------RYRLGDVVKVMGFHNSTPELKFICRR 313 (464)
Q Consensus 269 eve~G~~YelVvTt---~~GLy--------------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~ 313 (464)
++++|+.+||++.. ..|+| -|++||+.++. .-.+.|+||.
T Consensus 423 ~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-----dG~l~i~GR~ 497 (612)
T PRK12476 423 ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-----DGELYITGRI 497 (612)
T ss_pred CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-----CCEEEEEecc
Confidence 46789999999954 24554 48999999753 2469999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHH
Q 012409 314 NLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 314 ~~~l~v~GEkv~e~~v~~av~~a 336 (464)
++++++.|++++..+|++++.+.
T Consensus 498 ~d~I~~~G~~I~p~eIE~~l~~~ 520 (612)
T PRK12476 498 ADLIVIDGRNHYPQDIEATVAEA 520 (612)
T ss_pred CcEEEECCcccCHHHHHHHHHHh
Confidence 99999999999999999999854
No 65
>PRK08316 acyl-CoA synthetase; Validated
Probab=98.36 E-value=2.8e-06 Score=90.31 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=85.1
Q ss_pred CCCceeEEEeecC--hHHHHHHHHHHhCCCCeecccccccccee-eecCCCC---CCcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPS---LPPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~-gi~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
++++ .++.+|+ .....+.+++.+++++++ ..||+||+.. +....+. ..+...+. ..+ ..|+.-.+
T Consensus 286 ~~l~--~~~~gg~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G~-~~~---~~~~~i~~-- 356 (523)
T PRK08316 286 SSLR--KGYYGASIMPVEVLKELRERLPGLRFY-NCYGQTEIAPLATVLGPEEHLRRPGSAGR-PVL---NVETRVVD-- 356 (523)
T ss_pred ccce--EEEEcCCcCCHHHHHHHHHHcCCCcee-eeecccccCccccccCccccccccCCccc-CCC---CcEEEEEc--
Confidence 4555 2334443 335567788888889998 9999999632 2111110 00011111 111 12332222
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCc
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNL 315 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~ 315 (464)
+. ++ ++..|+.+|+++++. .|+| .|++||+.++. ....+.|+||.++
T Consensus 357 ~~--------~~-----~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl~~~~----~~g~l~i~gR~~~ 419 (523)
T PRK08316 357 DD--------GN-----DVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDLGVMD----EEGYITVVDRKKD 419 (523)
T ss_pred CC--------CC-----CCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccceEEEc----CCceEEEeccccc
Confidence 11 22 355799999999764 3444 39999999987 5567999999999
Q ss_pred eeeeeeeecCHHHHHHHHHHH
Q 012409 316 LLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 316 ~l~v~GEkv~e~~v~~av~~a 336 (464)
++++.|+|++..+|++++.+.
T Consensus 420 ~i~~~G~~i~~~~iE~~l~~~ 440 (523)
T PRK08316 420 MIKTGGENVASREVEEALYTH 440 (523)
T ss_pred EEEeCCeEECHHHHHHHHHhC
Confidence 999999999999999999753
No 66
>PRK13391 acyl-CoA synthetase; Provisional
Probab=98.36 E-value=1.8e-05 Score=84.51 Aligned_cols=132 Identities=10% Similarity=-0.003 Sum_probs=82.7
Q ss_pred CCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCCceeEEEeCCCCCccc
Q 012409 179 NAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 255 (464)
Q Consensus 179 ~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 255 (464)
+++ .+.+|+ .....+.+++.+ +.+++ ..||+||+....-..........+....|-....++++.+
T Consensus 276 ~l~---~~~~gg~~~~~~~~~~~~~~~-g~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g~~~i~d~~------ 344 (511)
T PRK13391 276 SLE---VAIHAAAPCPPQVKEQMIDWW-GPIIH-EYYAATEGLGFTACDSEEWLAHPGTVGRAMFGDLHILDDD------ 344 (511)
T ss_pred cee---EEEEccCCCCHHHHHHHHHHc-CCcee-eeeccccccceEEecCccccccCCCcCCcccceEEEECCC------
Confidence 566 444443 235557777777 57777 9999999853211111100000111111211223444322
Q ss_pred ccccCCCcccccccccCCCeEEEEeccc--Ccee---------------eeeeCCEEEEecccCCCcEEEEEeecCceee
Q 012409 256 QVLCIEPKPVGLTEVKVGEEYEIIVTNV--AGLY---------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLT 318 (464)
Q Consensus 256 ~~~~~~~~~l~l~eve~G~~YelVvTt~--~GLy---------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~ 318 (464)
+ .+++.|+.+||++... -|+| -|++||+.+.. ..-.+.|+||.+++++
T Consensus 345 ------~-----~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~----~~g~l~~~gR~~~~i~ 409 (511)
T PRK13391 345 ------G-----AELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWSTVGDIGYVD----EDGYLYLTDRAAFMII 409 (511)
T ss_pred ------C-----CCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEecCCEEEEC----CCccEEEeccCCCEEE
Confidence 2 2356899999999663 3343 27899988876 5567899999999999
Q ss_pred eeeeecCHHHHHHHHHHH
Q 012409 319 INIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 319 v~GEkv~e~~v~~av~~a 336 (464)
+.|+|+++.+|++++.+.
T Consensus 410 ~~G~~v~~~eie~~l~~~ 427 (511)
T PRK13391 410 SGGVNIYPQEAENLLITH 427 (511)
T ss_pred eCCEEECHHHHHHHHHhC
Confidence 999999999999999743
No 67
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=98.36 E-value=1.5e-05 Score=85.84 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=84.2
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC---cccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP---PELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~---~~~~~~~l~~~~~ffEFip~~~ 250 (464)
.++++ ++..|+ .....+++.+.+ +++++ +.||+||+.+......... ....+..+.|+. ++.-.+
T Consensus 299 ~~~l~---~v~~gg~~l~~~~~~~~~~~~-g~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~---~v~i~d- 369 (536)
T PRK10946 299 LASLK---LLQVGGARLSETLARRIPAEL-GCQLQ-QVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDD---EVWVAD- 369 (536)
T ss_pred cccee---EEEECCCCCCHHHHHHHHHhc-CCeEE-EeecccccceeeecCCCccccccccCCcccCCCc---eEEEEC-
Confidence 36777 455554 224445566667 78888 9999999865442111000 011111111221 222222
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEecc---cCcee--------------eeeeCCEEEEecccCCCcEEEEEeec
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR 313 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt---~~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~ 313 (464)
+ ++ .++..|+.+||+++. ..|+| -|++||+.+.+ ..-.+.|+||.
T Consensus 370 -~--------~~-----~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d----~~G~l~~~gR~ 431 (536)
T PRK10946 370 -A--------DG-----NPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSID----PDGYITVVGRE 431 (536)
T ss_pred -C--------CC-----CCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEEC----CCCcEEEeccc
Confidence 0 12 236689999999954 34544 29999999987 34568899999
Q ss_pred CceeeeeeeecCHHHHHHHHHH
Q 012409 314 NLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 314 ~~~l~v~GEkv~e~~v~~av~~ 335 (464)
++++++.|++++..+|+.++.+
T Consensus 432 ~d~i~~~G~~v~~~eiE~~l~~ 453 (536)
T PRK10946 432 KDQINRGGEKIAAEEIENLLLR 453 (536)
T ss_pred cceeecCCEEEcHHHHHHHHHh
Confidence 9999999999999999999974
No 68
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=98.35 E-value=2e-05 Score=89.13 Aligned_cols=132 Identities=17% Similarity=0.211 Sum_probs=82.2
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeecccccccccee--eecCCCCCCcccceeeecCCCceeEEEeCCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI--GANVNPSLPPELATFAVLPNIGYFEFIPQRLGN 252 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~--gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~ 252 (464)
++|+ .+.+|+ .....+.++..+ |+++. .+||+||+.. .++......+..+|-.+.|. .|+.-.+.
T Consensus 461 ~~lr---~~~sGGapl~~~~~~~~~~~~-g~~i~-~gYGlTEt~~~~~~~~~~~~~~gsvG~p~~pg---~e~ki~d~-- 530 (746)
T PTZ00342 461 PNLE---VILNGGGKLSPKIAEELSVLL-NVNYY-QGYGLTETTGPIFVQHADDNNTESIGGPISPN---TKYKVRTW-- 530 (746)
T ss_pred CCeE---EEEEcCCCCCHHHHHHHHHhc-CCCEE-EeeccCcccceeeeccCCCCCcccccCcCCCc---EEEEEecc--
Confidence 5666 445553 234445566666 78998 9999999743 22211111111222211132 35544331
Q ss_pred cccccccCCCcccccccccCCCeEEEEecc---cCceee--------------eeeCCEEEEecccCCCcEEEEEeecCc
Q 012409 253 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRNL 315 (464)
Q Consensus 253 ~~~~~~~~~~~~l~l~eve~G~~YelVvTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 315 (464)
.+ .. ....+..+||++.. +.|+|+ |+|||+.++. ..-.+.|+||.++
T Consensus 531 ~~-------~~-----~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d----~dG~l~i~gR~kd 594 (746)
T PTZ00342 531 ET-------YK-----ATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQIN----KNGSLTFLDRSKG 594 (746)
T ss_pred cc-------cc-----cCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEEC----CCCeEEEEccCCC
Confidence 00 00 11233468999833 467764 9999999987 5568999999999
Q ss_pred eeee-eeeecCHHHHHHHHHH
Q 012409 316 LLTI-NIDKNTEKDLQLSVDE 335 (464)
Q Consensus 316 ~l~v-~GEkv~e~~v~~av~~ 335 (464)
++++ .||++++.+|++++.+
T Consensus 595 lIkls~Ge~I~p~eIE~~l~~ 615 (746)
T PTZ00342 595 LVKLSQGEYIETDMLNNLYSQ 615 (746)
T ss_pred eEEeCCCEEEchHHHHHHHhc
Confidence 9996 6999999999999874
No 69
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=98.35 E-value=2.8e-06 Score=91.77 Aligned_cols=133 Identities=15% Similarity=0.205 Sum_probs=84.9
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC---cccceeeecCCCceeEEEeCCCC
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP---PELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~---~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
+++++. ++.+|. ...-.+++++.+ ++++. ..||+||+...+...+... +...+. ..++ .-...++.+
T Consensus 328 l~~lr~--v~~gG~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~vG~-~~~~-~~v~i~d~~-- 399 (560)
T PRK08751 328 FSSLKM--TLGGGMAVQRSVAERWKQVT-GLTLV-EAYGLTETSPAACINPLTLKEYNGSIGL-PIPS-TDACIKDDA-- 399 (560)
T ss_pred hhhhee--eeeCCCCCCHHHHHHHHHHh-CCeEE-EeeccccCCCceecccccccccCCCcCc-cCCC-ceEEEECCC--
Confidence 456662 234442 334456777777 78888 9999999854332221100 011111 1121 112222211
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Cceee--------------eeeCCEEEEecccCCCcEEEEEeecC
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
+ .+++.|+.+||++++. .|+|. |++||+++++ ..-.+.|+||.+
T Consensus 400 ----------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~----~~g~l~i~GR~~ 460 (560)
T PRK08751 400 ----------G-----TVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMD----EQGFVYIVDRKK 460 (560)
T ss_pred ----------C-----CCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEc----CCceEEEEeech
Confidence 2 2356889999999764 34432 8999999987 456789999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~a 336 (464)
+++++.|++++..+|++++.+.
T Consensus 461 d~i~~~G~~v~p~eiE~~l~~~ 482 (560)
T PRK08751 461 DMILVSGFNVYPNEIEDVIAMM 482 (560)
T ss_pred hheeECCEEEcHHHHHHHHHhC
Confidence 9999999999999999999754
No 70
>PRK07470 acyl-CoA synthetase; Validated
Probab=98.33 E-value=1.5e-05 Score=85.48 Aligned_cols=63 Identities=22% Similarity=0.247 Sum_probs=53.4
Q ss_pred cccCCCeEEEEeccc---Cceee-------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHH
Q 012409 269 EVKVGEEYEIIVTNV---AGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 332 (464)
Q Consensus 269 eve~G~~YelVvTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~a 332 (464)
+++.|+.+||++++. .|+|. |++||+.++. ....+.+.||.++++++.|++++..+|+.+
T Consensus 360 ~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~----~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~ 435 (528)
T PRK07470 360 ELPPGETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDLGHLD----ARGFLYITGRASDMYISGGSNVYPREIEEK 435 (528)
T ss_pred CCCCCCceEEEEeCCccchhhcCCHHHHHhhhcCCcEecceeEEEc----cCCeEEEeCCccceEEeCCEEECHHHHHHH
Confidence 466899999999654 44543 9999998887 456799999999999999999999999999
Q ss_pred HHH
Q 012409 333 VDE 335 (464)
Q Consensus 333 v~~ 335 (464)
+..
T Consensus 436 l~~ 438 (528)
T PRK07470 436 LLT 438 (528)
T ss_pred HHh
Confidence 974
No 71
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=98.33 E-value=3.1e-05 Score=83.41 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=52.5
Q ss_pred ccCCCeEEEEeccc---Cceee---------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 270 VKVGEEYEIIVTNV---AGLYR---------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 270 ve~G~~YelVvTt~---~GLyR---------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
++.|+.+||++... .|+|. |++||+.+.. + -.+.|+||.++++++.|++++..+|++++.+.
T Consensus 367 ~~~g~~GEl~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~---~--G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~ 440 (525)
T PRK05851 367 VAGREIGEIEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV---D--GGLVVCGRAKELITVAGRNIFPTEIERVAAQV 440 (525)
T ss_pred CCCCCeEEEEEecCchhhccccCCccCCCCceeccceEEEE---C--CEEEEEeecCCEEEECCEEeCHHHHHHHHHhC
Confidence 67899999999653 46653 9999999874 2 36899999999999999999999999999854
No 72
>PRK12467 peptide synthase; Provisional
Probab=98.33 E-value=4.4e-06 Score=109.09 Aligned_cols=133 Identities=13% Similarity=0.131 Sum_probs=87.9
Q ss_pred CCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCc-------ccceeeecCCCceeEEE
Q 012409 177 FPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP-------ELATFAVLPNIGYFEFI 246 (464)
Q Consensus 177 WP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~-------~~~~~~l~~~~~ffEFi 246 (464)
.|.|+ .++.|| ...-.+++++.++++.++ +.||.||+.+.......... ...| ..+|+. ++.
T Consensus 3350 ~~~lr---~~~~gGe~~~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG-~p~~~~---~~~ 3421 (3956)
T PRK12467 3350 CASLD---IYVFGGEAVPPAAFEQVKRKLKPRGLT-NGYGPTEAVVTVTLWKCGGDAVCEAPYAPIG-RPVAGR---SIY 3421 (3956)
T ss_pred CCCce---EEEEecCCCCHHHHHHHHHhCCCCEEE-eCcccchhEeeeEEEecccccccCCCCCCCc-cccCCC---EEE
Confidence 35666 444443 234456666677788888 99999998764432111000 0011 122332 222
Q ss_pred eCCCCCcccccccCCCcccccccccCCCeEEEEeccc---Cceee---------------------eeeCCEEEEecccC
Q 012409 247 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR---------------------YRLGDVVKVMGFHN 302 (464)
Q Consensus 247 p~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR---------------------Yr~GDvV~v~gf~~ 302 (464)
-.+ +. . .+|.+|+.+||+|... .|+|+ |||||++++.
T Consensus 3422 v~d--~~--------~-----~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~---- 3482 (3956)
T PRK12467 3422 VLD--GQ--------L-----NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYR---- 3482 (3956)
T ss_pred EEC--CC--------C-----CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheec----
Confidence 223 11 2 2467899999999543 55543 9999999987
Q ss_pred CCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 303 STPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 303 ~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
..-.++|+||.|++++++|.++...+|+.++.+.
T Consensus 3483 ~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~ 3516 (3956)
T PRK12467 3483 ADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQH 3516 (3956)
T ss_pred CCCcEEEeccccceEeeceEeecHHHHHHHHhhC
Confidence 5568999999999999999999999999999854
No 73
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=98.32 E-value=5.6e-06 Score=89.77 Aligned_cols=118 Identities=15% Similarity=0.236 Sum_probs=77.7
Q ss_pred HHHHHHHHHhCCCCeeccccccccceeeecCCCC---CCcccceeeecCCCceeEEEeCCCCCcccccccCCCccccccc
Q 012409 193 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS---LPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTE 269 (464)
Q Consensus 193 ~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~---~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~e 269 (464)
.-+.++++.+ ++++. ..||+||+..-....+. ..+...+. .+|+. =+++++.+ + .+
T Consensus 348 ~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-p~~~~-~v~ivd~~------------~-----~~ 406 (562)
T PRK12492 348 ATAERWEQLT-GCTIV-EGYGLTETSPVASTNPYGELARLGTVGI-PVPGT-ALKVIDDD------------G-----NE 406 (562)
T ss_pred HHHHHHHHHh-CCcee-eccCccccCceeeecCCcccccCCccce-ecCCC-EEEEECCC------------C-----CC
Confidence 4456666666 78988 99999997321111111 01112222 22322 12333211 2 23
Q ss_pred ccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHH
Q 012409 270 VKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 332 (464)
Q Consensus 270 ve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~a 332 (464)
+..|+.+||++++. .|+| .|++||+.++. ..-.+.|+||.++++++.|+++++.+|+.+
T Consensus 407 ~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~----~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~ 482 (562)
T PRK12492 407 LPLGERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVID----PDGFVRIVDRKKDLIIVSGFNVYPNEIEDV 482 (562)
T ss_pred CCCCCceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEEC----CCCeEEEecccCCeEEECCEEECHHHHHHH
Confidence 56799999999763 3444 29999999987 445789999999999999999999999999
Q ss_pred HHH
Q 012409 333 VDE 335 (464)
Q Consensus 333 v~~ 335 (464)
+.+
T Consensus 483 l~~ 485 (562)
T PRK12492 483 VMA 485 (562)
T ss_pred HHh
Confidence 874
No 74
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=98.29 E-value=9.1e-06 Score=88.24 Aligned_cols=61 Identities=13% Similarity=0.142 Sum_probs=51.3
Q ss_pred CCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHH
Q 012409 272 VGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVD 334 (464)
Q Consensus 272 ~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~ 334 (464)
.|+.+||++... .|+| -|++||+.++. ..-.+.|+||.++++++.|+++++.+|++++.
T Consensus 382 ~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 457 (563)
T PLN02860 382 SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWID----KAGNLWLIGRSNDRIKTGGENVYPEEVEAVLS 457 (563)
T ss_pred CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEc----CCCCEEEeecccceeEECCEEccHHHHHHHHH
Confidence 689999999653 4554 27999999986 44578999999999999999999999999987
Q ss_pred HH
Q 012409 335 EA 336 (464)
Q Consensus 335 ~a 336 (464)
+.
T Consensus 458 ~~ 459 (563)
T PLN02860 458 QH 459 (563)
T ss_pred hC
Confidence 53
No 75
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.29 E-value=1.5e-05 Score=92.78 Aligned_cols=146 Identities=8% Similarity=0.018 Sum_probs=88.3
Q ss_pred CCCceeEEEeecChH-HHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCCceeEEEeCCCCCcccc
Q 012409 178 PNAKYLSGIMTGSME-HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ 256 (464)
Q Consensus 178 P~l~~i~~~~tG~~~-~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~ 256 (464)
+.++ .+.+|++. ...+++.+.+|+++++ +.||+||+.+.+...+...+...+. .+|+..-++..+.++ +.+.-
T Consensus 720 ~slr---~~~g~gl~~~l~~~~~~~~~~~~l~-~~YG~TE~~~~~~~~~~~~~~svG~-p~pg~~~v~i~~~d~-~~g~l 793 (994)
T PRK07868 720 HPVR---LFIGSGMPTGLWERVVEAFAPAHVV-EFFATTDGQAVLANVSGAKIGSKGR-PLPGAGRVELAAYDP-EHDLI 793 (994)
T ss_pred CceE---EEecCCCCHHHHHHHHHHhCchhee-eeeecccccccccccCCCCCcccCC-ccCCCCceeEEEecC-cCCce
Confidence 3556 33455443 5567777888778988 9999999854221101111112222 234432233332221 00000
Q ss_pred cccCCCcccccccccCCCeEEEEeccc----------Cceee-----eeeCCEEEEecccCCCcEEEEEeecCceeeeee
Q 012409 257 VLCIEPKPVGLTEVKVGEEYEIIVTNV----------AGLYR-----YRLGDVVKVMGFHNSTPELKFICRRNLLLTINI 321 (464)
Q Consensus 257 ~~~~~~~~l~l~eve~G~~YelVvTt~----------~GLyR-----Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~G 321 (464)
..++++ -..+++.|+.+||++... .|.++ |+|||+.++. ..-.+.|+||.++++++.|
T Consensus 794 i~d~~G---~~~~~~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d----~dG~l~~~GR~dd~Ik~~G 866 (994)
T PRK07868 794 LEDDRG---FVRRAEVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRD----DDGDYWLVDRRGSVIRTAR 866 (994)
T ss_pred eecCCc---eEEEcCCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEc----CCCCEEEeccCCCEEEeCC
Confidence 000011 012467899999998542 23332 8899999987 5567999999999999999
Q ss_pred eecCHHHHHHHHHHH
Q 012409 322 DKNTEKDLQLSVDEA 336 (464)
Q Consensus 322 Ekv~e~~v~~av~~a 336 (464)
++++..+|++++.+.
T Consensus 867 ~~I~p~EIE~~L~~h 881 (994)
T PRK07868 867 GPVYTEPVTDALGRI 881 (994)
T ss_pred ceEcHHHHHHHHhcC
Confidence 999999999999853
No 76
>PRK13390 acyl-CoA synthetase; Provisional
Probab=98.28 E-value=1.1e-05 Score=85.86 Aligned_cols=129 Identities=9% Similarity=0.053 Sum_probs=81.2
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
++++ .+++|+ .....+.+++.+ +.+++ ..||+||+......+... .+...+. ..|+ . .+.++.+
T Consensus 270 ~~l~---~v~~~g~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G~-~~~g-~-~~i~d~~-- 339 (501)
T PRK13390 270 SSLR---AVIHAAAPCPVDVKHAMIDWL-GPIVY-EYYSSTEAHGMTFIDSPDWLAHPGSVGR-SVLG-D-LHICDDD-- 339 (501)
T ss_pred hhhh---eEEEcCCCCCHHHHHHHHHhc-CCcee-eeecccccCceEEecchhhccCCCCcCC-cccc-e-EEEECCC--
Confidence 4566 444443 234456666666 67888 899999984211111110 0111111 1222 1 2333211
Q ss_pred CcccccccCCCcccccccccCCCeEEEEecccC---cee----------------eeeeCCEEEEecccCCCcEEEEEee
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNVA---GLY----------------RYRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~~---GLy----------------RYr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
++ .++.|+.+||++.+.+ |+| -|++||+.++. ..-.+.|+||
T Consensus 340 ----------~~-----~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~----~dg~l~~~gR 400 (501)
T PRK13390 340 ----------GN-----ELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVD----EDGYLYLADR 400 (501)
T ss_pred ----------CC-----CCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEEC----CCCeEEEeec
Confidence 22 3568999999997643 332 25899999987 4467899999
Q ss_pred cCceeeeeeeecCHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
.++++++.|+++++.+|++++..
T Consensus 401 ~~~~i~~~G~~v~p~eIE~~l~~ 423 (501)
T PRK13390 401 KSFMIISGGVNIYPQETENALTM 423 (501)
T ss_pred cccceeECCeeeCHHHHHHHHHh
Confidence 99999999999999999999973
No 77
>PRK05850 acyl-CoA synthetase; Validated
Probab=98.27 E-value=3.6e-05 Score=83.65 Aligned_cols=63 Identities=27% Similarity=0.331 Sum_probs=52.6
Q ss_pred cccCCCeEEEEeccc---Ccee-------------------------eeeeCCEEEEecccCCCcEEEEEeecCceeeee
Q 012409 269 EVKVGEEYEIIVTNV---AGLY-------------------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTIN 320 (464)
Q Consensus 269 eve~G~~YelVvTt~---~GLy-------------------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~ 320 (464)
+++.|+.+||++... .|+| -|++||+.++. + -.+.|+||.++++++.
T Consensus 391 ~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~---~--G~l~~~GR~~d~i~~~ 465 (578)
T PRK05850 391 ECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS---E--GELFIVGRIKDLLIVD 465 (578)
T ss_pred CCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE---C--CEEEEEcccccEEEEC
Confidence 467899999999553 3544 48999998764 2 3789999999999999
Q ss_pred eeecCHHHHHHHHHHH
Q 012409 321 IDKNTEKDLQLSVDEA 336 (464)
Q Consensus 321 GEkv~e~~v~~av~~a 336 (464)
|++++..+|+.++.+.
T Consensus 466 G~~i~p~eIE~~l~~~ 481 (578)
T PRK05850 466 GRNHYPDDIEATIQEI 481 (578)
T ss_pred CeecCHHHHHHHHHHh
Confidence 9999999999999854
No 78
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.27 E-value=3.9e-06 Score=100.61 Aligned_cols=137 Identities=17% Similarity=0.240 Sum_probs=86.4
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC-ccccee-----------eecCCCce
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP-PELATF-----------AVLPNIGY 242 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~-~~~~~~-----------~l~~~~~f 242 (464)
.|.|+ .++.+|. ......++++..++++++ +.||+||+.+........+ .....+ ..+++..
T Consensus 528 ~~~lr--~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~- 603 (1389)
T TIGR03443 528 IPSLH--HAFFVGDILTKRDCLRLQTLAENVCIV-NMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQ- 603 (1389)
T ss_pred CCCcc--EEEEecccCCHHHHHHHHHhCCCCEEE-ECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCE-
Confidence 56777 3344553 334556677778889999 9999999854332110000 000000 0111110
Q ss_pred eEEEeCCCCCcccccccCCCcccccccccCCCeEEEEecc---cCcee--------------------------------
Q 012409 243 FEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY-------------------------------- 287 (464)
Q Consensus 243 fEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt---~~GLy-------------------------------- 287 (464)
...++.+ + .. ..+.+|+.+||+|.. ..|+|
T Consensus 604 ~~ivd~~----~------~~-----~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~ 668 (1389)
T TIGR03443 604 LLVVNRN----D------RT-----QTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPE 668 (1389)
T ss_pred EEEECCc----c------CC-----CcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCccccccccccccccc
Confidence 1111111 0 01 236789999999944 24554
Q ss_pred ----------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 288 ----------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 288 ----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
-|+|||++++. ..-.+.|+||.+++++++|+++...+|+.++.+.
T Consensus 669 ~~~~~~~~~~~y~TGDlg~~~----~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~ 723 (1389)
T TIGR03443 669 REFWLGPRDRLYRTGDLGRYL----PDGNVECCGRADDQVKIRGFRIELGEIDTHLSQH 723 (1389)
T ss_pred ccccCCCccceeecCCceeEc----CCCCEEEecccCCEEEeCcEEecHHHHHHHHHhC
Confidence 39999999987 4467999999999999999999999999999853
No 79
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.27 E-value=1e-05 Score=96.18 Aligned_cols=132 Identities=17% Similarity=0.290 Sum_probs=85.6
Q ss_pred CCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCc---------ccceeeecCCCceeEEE
Q 012409 178 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPP---------ELATFAVLPNIGYFEFI 246 (464)
Q Consensus 178 P~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~---------~~~~~~l~~~~~ffEFi 246 (464)
++++. .+++|. .....+++++.+ +++++ +.||+||+.+.....+.++. ...+. .+++.. ...+
T Consensus 717 ~~lr~--i~~gGe~l~~~~~~~~~~~~-~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~-p~~~~~-~~i~ 790 (1296)
T PRK10252 717 ASLRQ--VFCSGEALPADLCREWQQLT-GAPLH-NLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGY-PVWNTG-LRIL 790 (1296)
T ss_pred CCccE--EEEecCCCCHHHHHHHHhcC-CCEEE-eCCCcchhhheeeeeecccccccccCCCCCCccc-ccCCCE-EEEE
Confidence 56772 334442 234456666655 78888 99999998654332221110 01121 122321 1222
Q ss_pred eCCCCCcccccccCCCcccccccccCCCeEEEEeccc---Ccee--------------------eeeeCCEEEEecccCC
Q 012409 247 PQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------------RYRLGDVVKVMGFHNS 303 (464)
Q Consensus 247 p~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------------RYr~GDvV~v~gf~~~ 303 (464)
+.+ . ..+..|+.+||+|+.. .|+| -||+||++++. .
T Consensus 791 d~~------------~-----~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~----~ 849 (1296)
T PRK10252 791 DAR------------M-----RPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWL----D 849 (1296)
T ss_pred CCC------------C-----CCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEc----C
Confidence 211 2 2366899999999763 3433 29999999987 4
Q ss_pred CcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 304 TPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 304 ~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.-.+.|+||.+++++++|+++...+|+.++.+.
T Consensus 850 ~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~ 882 (1296)
T PRK10252 850 DGAVEYLGRSDDQLKIRGQRIELGEIDRAMQAL 882 (1296)
T ss_pred CCcEEEecccCCeEEEeeEEecHHHHHHHHHhC
Confidence 568999999999999999999999999999854
No 80
>PRK13388 acyl-CoA synthetase; Provisional
Probab=98.26 E-value=8.6e-06 Score=88.07 Aligned_cols=129 Identities=16% Similarity=0.148 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCCceeEEEeCCCCCcccc---cccCCCccccc
Q 012409 191 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQ---VLCIEPKPVGL 267 (464)
Q Consensus 191 ~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~---~~~~~~~~l~l 267 (464)
......++.+.+ +.+++ +.||+||+...+...+...+...+.. +|+ .+++..+ ..... ..+++++.+
T Consensus 276 ~~~~~~~~~~~~-~~~l~-~~YG~tE~~~~~~~~~~~~~~~vG~p-~~g---~~i~~~~--~~~~~~~~~~d~~g~~~-- 345 (540)
T PRK13388 276 SPRDIAEFSRRF-GCQVE-DGYGSSEGAVIVVREPGTPPGSIGRG-APG---VAIYNPE--TLTECAVARFDAHGALL-- 345 (540)
T ss_pred CHHHHHHHHHHh-CCcee-cccccccccceeecCCCCCCCCCCCC-CCC---cEEEcCC--CCccccceeccCccccc--
Confidence 334456666667 68888 99999998543322222222233332 243 3444322 00000 000012111
Q ss_pred ccccCCCeEEEEec-cc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHH
Q 012409 268 TEVKVGEEYEIIVT-NV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQ 330 (464)
Q Consensus 268 ~eve~G~~YelVvT-t~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~ 330 (464)
...|+.+||+++ .. .|+| .|++||+.+.. ..-.+.|+||.++++++.|+|++..+|+
T Consensus 346 --~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~----~dg~l~i~GR~~d~i~~~G~~v~p~eIE 419 (540)
T PRK13388 346 --NADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRD----ADGWIYFAGRTADWMRVDGENLSAAPIE 419 (540)
T ss_pred --cCCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccceEEEc----CCCcEEEeccCCceEEECCEEeCHHHHH
Confidence 134678999997 32 3555 49999999987 4457899999999999999999999999
Q ss_pred HHHHH
Q 012409 331 LSVDE 335 (464)
Q Consensus 331 ~av~~ 335 (464)
+++.+
T Consensus 420 ~~l~~ 424 (540)
T PRK13388 420 RILLR 424 (540)
T ss_pred HHHHh
Confidence 98874
No 81
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=98.26 E-value=7.1e-06 Score=86.80 Aligned_cols=133 Identities=17% Similarity=0.261 Sum_probs=83.4
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeec---CCCC----CCcccceeeecCCCceeEEEe
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGAN---VNPS----LPPELATFAVLPNIGYFEFIP 247 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~---~~~~----~~~~~~~~~l~~~~~ffEFip 247 (464)
.|+++.+ +.+|+ .....+++++.+++.+++ ..||+||....+. ..+. ......++ ..++. |.--
T Consensus 259 ~~~l~~i--~~~G~~l~~~~~~~~~~~~~~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~---~~~i 331 (503)
T PRK04813 259 LPNLTHF--LFCGEELPHKTAKKLLERFPSATIY-NTYGPTEATVAVTSIEITDEMLDQYKRLPIGY-AKPDS---PLLI 331 (503)
T ss_pred CCCceEE--EEecCcCCHHHHHHHHHHCCCceEE-eCcccchheeEEEEEEecccccccCCCCcccc-cCCCC---EEEE
Confidence 4677733 34442 446667788888888888 9999999633221 1111 00001111 11221 1111
Q ss_pred CCCCCcccccccCCCcccccccccCCCeEEEEeccc--------------------CceeeeeeCCEEEEecccCCCcEE
Q 012409 248 QRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV--------------------AGLYRYRLGDVVKVMGFHNSTPEL 307 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~--------------------~GLyRYr~GDvV~v~gf~~~~P~i 307 (464)
.+ + ++ .++..|+.+||+++.. .|.=-|++||++++. .-.+
T Consensus 332 ~d--~--------~~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~~-----~g~~ 391 (503)
T PRK04813 332 ID--E--------EG-----TKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYLE-----DGLL 391 (503)
T ss_pred EC--C--------CC-----CCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEee-----CCeE
Confidence 11 0 12 2356788999999763 221139999999982 2478
Q ss_pred EEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 308 KFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 308 ~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.|.||.++++++.|+|++..+|++++.+.
T Consensus 392 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 420 (503)
T PRK04813 392 FYQGRIDFQIKLNGYRIELEEIEQNLRQS 420 (503)
T ss_pred EEeccccceEEECcEEeCHHHHHHHHHhC
Confidence 89999999999999999999999998753
No 82
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=98.26 E-value=5.5e-06 Score=92.16 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=51.6
Q ss_pred cCCCeEEEEecc---cCceee-------------eeeCCEEEEecccCCCcEEEEEeecCceeee-eeeecCHHHHHHHH
Q 012409 271 KVGEEYEIIVTN---VAGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLSV 333 (464)
Q Consensus 271 e~G~~YelVvTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v-~GEkv~e~~v~~av 333 (464)
..|..+||++.. ..|+|+ |+|||+.++. ..-.+.|+||.++++++ .||++++.+|++++
T Consensus 461 ~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d----~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l 536 (660)
T PLN02861 461 SDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQ----PNGAMKIIDRKKNIFKLSQGEYVAVENLENTY 536 (660)
T ss_pred CCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEEC----CCCcEEEEeccccceEcCCCeEEcHHHHHHHH
Confidence 356678999943 577775 9999999997 45679999999999997 69999999999998
Q ss_pred HH
Q 012409 334 DE 335 (464)
Q Consensus 334 ~~ 335 (464)
.+
T Consensus 537 ~~ 538 (660)
T PLN02861 537 SR 538 (660)
T ss_pred hc
Confidence 74
No 83
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=98.25 E-value=2.5e-05 Score=87.61 Aligned_cols=45 Identities=13% Similarity=0.086 Sum_probs=39.9
Q ss_pred eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 288 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 288 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.|++||+.++. ..-.+.|+||.++++++.|+++++.+|++++.+.
T Consensus 592 w~~TGDlg~~d----~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~ 636 (718)
T PRK08043 592 WYDTGDIVRFD----EQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGV 636 (718)
T ss_pred eEecCCEEEEc----CCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhC
Confidence 38999999987 4457899999999999999999999999988753
No 84
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=98.24 E-value=3.9e-05 Score=82.69 Aligned_cols=130 Identities=14% Similarity=0.151 Sum_probs=80.5
Q ss_pred CCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCC-CC---cccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS-LP---PELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~-~~---~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
|+++ .++.+|. ....++.+.+ . +++++ ..||+||+......... +. ....+. ..++ ..++.++.+
T Consensus 302 ~~lr--~i~~gG~~~~~~~~~~~~~-~-~~~l~-~~YG~TE~~~~~~~~~~~~~~~~~~~~G~-~~~~-~~~~i~d~~-- 372 (547)
T PRK06087 302 SALR--FFLCGGTTIPKKVARECQQ-R-GIKLL-SVYGSTESSPHAVVNLDDPLSRFMHTDGY-AAAG-VEIKVVDEA-- 372 (547)
T ss_pred CCeE--EEEEcCCCCCHHHHHHHHH-c-CCcEE-EEecccccCCccccCCCcchhhcCCcCCc-cCCC-ceEEEEcCC--
Confidence 5666 2333442 2233444544 3 78988 99999997422111111 10 001111 1222 334444322
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecC
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
+ .+++.|+.+|+++... .|+| -|++||++++. ....+.|+||.+
T Consensus 373 ----------~-----~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~l~i~GR~~ 433 (547)
T PRK06087 373 ----------R-----KTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMD----EAGYIKITGRKK 433 (547)
T ss_pred ----------C-----CCCcCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEEC----CCCCEEEEecch
Confidence 2 2466899999998442 2332 28999999986 456789999999
Q ss_pred ceeeeeeeecCHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~ 335 (464)
+++++.|++++..+|++++..
T Consensus 434 d~i~~~G~~v~p~~iE~~l~~ 454 (547)
T PRK06087 434 DIIVRGGENISSREVEDILLQ 454 (547)
T ss_pred hhhhcCCEEECHHHHHHHHHh
Confidence 999999999999999999974
No 85
>PLN02736 long-chain acyl-CoA synthetase
Probab=98.24 E-value=6e-06 Score=91.54 Aligned_cols=134 Identities=14% Similarity=0.126 Sum_probs=82.6
Q ss_pred CCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCC--CCcccceeeecCCCceeEEEeCCCCCc
Q 012409 179 NAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLGNL 253 (464)
Q Consensus 179 ~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~~ 253 (464)
+++ .+.+|+ .....+.+++.+ |++++ .+||+||+...+..... ..+...+ ...|+. -..+++.++ .
T Consensus 377 ~lr---~~~~gGa~l~~~~~~~~~~~~-g~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG-~p~pg~-~v~i~d~~~--~ 447 (651)
T PLN02736 377 RVR---FMSSGASPLSPDVMEFLRICF-GGRVL-EGYGMTETSCVISGMDEGDNLSGHVG-SPNPAC-EVKLVDVPE--M 447 (651)
T ss_pred cEE---EEEeCCCCCCHHHHHHHHHHh-CCCeE-EEechHHhchheeccCCCCCCCCccC-CccCce-EEEEEEccc--c
Confidence 555 444443 224455666667 68888 99999998543322111 1111122 123332 234444331 1
Q ss_pred ccccccCCCcccccccccCCCeEEEEecc---cCceee--------------eeeCCEEEEecccCCCcEEEEEeecCce
Q 012409 254 ESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRNLL 316 (464)
Q Consensus 254 ~~~~~~~~~~~l~l~eve~G~~YelVvTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~ 316 (464)
.. ..+.+++..+||++.. ..|+|. |+|||+.++. ..-.+.|+||.+++
T Consensus 448 ---------~~--~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d----~dG~l~i~GR~kd~ 512 (651)
T PLN02736 448 ---------NY--TSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWL----PGGRLKIIDRKKNI 512 (651)
T ss_pred ---------Cc--ccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEc----CCCcEEEEEechhh
Confidence 00 0123345568999954 356663 8999999998 44579999999999
Q ss_pred eee-eeeecCHHHHHHHHHHH
Q 012409 317 LTI-NIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 317 l~v-~GEkv~e~~v~~av~~a 336 (464)
+++ .|+++++.+|++++.+.
T Consensus 513 ik~~~G~~V~p~eIE~~l~~~ 533 (651)
T PLN02736 513 FKLAQGEYIAPEKIENVYAKC 533 (651)
T ss_pred eEcCCCcEechHHHHHHHhcC
Confidence 998 69999999999999753
No 86
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=98.23 E-value=2e-05 Score=85.60 Aligned_cols=134 Identities=16% Similarity=0.234 Sum_probs=93.0
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccce--eeecCCCCC-CcccceeeecCCCceeEEEeCCCC
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGW--IGANVNPSL-PPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~--~gi~~~~~~-~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
.|.++.|. ++|+ ...-..++++.+|...+. .+||+||.. +..|.+... .++.++. +++ ..-=.+..+
T Consensus 298 l~sl~~v~--~gga~~~~~~~~~~~~~l~~~~v~-q~YGmTE~~~~~~~~~~~~e~k~~svG~-~~~--g~~~~v~~e-- 369 (537)
T KOG1176|consen 298 LSSLRSVL--SGGAPLSPATLEKVKERLPNVTVI-QGYGMTEAGGLITSNDWGPERKPGSVGR-LLP--GVRVKVLDE-- 369 (537)
T ss_pred CCccEEEE--ecCCCCCHHHHHHHHHhCCCceEE-EeeccccccCceeecCCCccCcccccCc-ccc--ceEEEeeCC--
Confidence 34565332 4443 446678888999767777 999999985 456666552 3444443 444 111122212
Q ss_pred CcccccccCCCcccccccccCCCeEEEEe---cccCceee--------------eeeCCEEEEecccCCCcEEEEEeecC
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIV---TNVAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVv---Tt~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
. ++ ++.+++.+||++ +-..|+|. |+|||+ ||....-.+.+++|.+
T Consensus 370 -~--------g~-----~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDi----Gy~D~DG~l~IvdR~K 431 (537)
T KOG1176|consen 370 -T--------GV-----SLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDL----GYFDEDGYLYIVDRSK 431 (537)
T ss_pred -C--------CC-----CCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCce----EEEcCCCeEEEecchh
Confidence 2 32 355889999999 34478776 899998 4445888999999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~a 336 (464)
++++..|+++++.||++++..-
T Consensus 432 dlIk~~G~qv~P~EiE~vL~~h 453 (537)
T KOG1176|consen 432 DLIKYGGEQVSPAEIEAVLLTH 453 (537)
T ss_pred hheeeCCEEeCHHHHHHHHHhC
Confidence 9999999999999999999853
No 87
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=98.22 E-value=4.7e-06 Score=88.43 Aligned_cols=61 Identities=10% Similarity=0.161 Sum_probs=51.0
Q ss_pred CCCeEEEEecc---cCceee--------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 272 VGEEYEIIVTN---VAGLYR--------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 272 ~G~~YelVvTt---~~GLyR--------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.|+.+||++.. ..|+|. |++||++++. ....+.|+||.++++++.|+|+++.+|+.++.+.
T Consensus 298 ~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~ 369 (452)
T PRK07445 298 ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLD----AQGYLHILGRNSQKIITGGENVYPAEVEAAILAT 369 (452)
T ss_pred CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEc----CCCCEEEEeecCCEEEECCEEECHHHHHHHHHhC
Confidence 48999999943 345542 8999999986 4567899999999999999999999999999854
No 88
>PRK12316 peptide synthase; Provisional
Probab=98.22 E-value=2e-05 Score=105.13 Aligned_cols=150 Identities=14% Similarity=0.106 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHhcCCCCCCCCccccCCCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCC---C
Q 012409 152 NPELADLIHKKCSGLSNWYGLIPELFPNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN---P 225 (464)
Q Consensus 152 ~p~~A~~L~~~~~~~~~~~~~~~~lWP~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~---~ 225 (464)
.|..++.|.+..... ...|.|+ +++.|| .....+++.+.++++.++ +.||.||+.+..... +
T Consensus 2243 ~P~~~~~l~~~~~~~--------~~~~~lr---~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~ 2310 (5163)
T PRK12316 2243 PPVYLQQLAEHAERD--------GRPPAVR---VYCFGGEAVPAASLRLAWEALRPVYLF-NGYGPTEAVVTPLLWKCRP 2310 (5163)
T ss_pred ChHHHHHHHhhhhcc--------cCCccee---EEEEecccCCHHHHHHHHHhCCCcEEE-ECccchhheeeeeeeeccc
Confidence 366666665443221 2234677 445443 223445555566788888 999999986543211 1
Q ss_pred CCCcc----cceeeecCCCceeEEEeCCCCCcccccccCCCcccccccccCCCeEEEEeccc---Ccee-----------
Q 012409 226 SLPPE----LATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY----------- 287 (464)
Q Consensus 226 ~~~~~----~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy----------- 287 (464)
..+.. ..|. .+++. +..-.+ +. . ..|+.|+.+||+|... .|+|
T Consensus 2311 ~~~~~~~~~~iG~-p~~~~---~~~i~d--~~--------~-----~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~ 2371 (5163)
T PRK12316 2311 QDPCGAAYVPIGR-ALGNR---RAYILD--AD--------L-----NLLAPGMAGELYLGGEGLARGYLNRPGLTAERFV 2371 (5163)
T ss_pred ccccCCCcCCccc-ccCCC---EEEEEC--CC--------C-----CCCCCCCeeEEEecchhhcccccCChhhhhhhcc
Confidence 11100 1111 12222 222122 11 2 2467899999999432 3443
Q ss_pred ----------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 288 ----------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 288 ----------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
-|||||++++. ..-.+.|+||.|++++++|.++...+|+.++.+.
T Consensus 2372 ~~~~~~~~~~~yrTGDl~~~~----~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~ 2426 (5163)
T PRK12316 2372 PDPFSASGERLYRTGDLARYR----ADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAH 2426 (5163)
T ss_pred CCCCCCCCCeeEecccEEEEc----CCCcEEEecCCCCeEEEcCccCChHHHHHHHhhC
Confidence 29999999987 5568999999999999999999999999999753
No 89
>PRK08315 AMP-binding domain protein; Validated
Probab=98.22 E-value=6.2e-05 Score=81.16 Aligned_cols=135 Identities=14% Similarity=0.148 Sum_probs=85.3
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC-----cccceeeecCCCceeEEEeCC
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP-----PELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~-----~~~~~~~l~~~~~ffEFip~~ 249 (464)
.|+++ ..+.+|+ ...-++.+.+.++..+++ ..||+||+..........+ +...+. .+|+ .-.+.++.+
T Consensus 314 ~~~lr--~~~~~G~~~~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~-p~~~-~~v~i~d~~ 388 (559)
T PRK08315 314 LSSLR--TGIMAGSPCPIEVMKRVIDKMHMSEVT-IAYGMTETSPVSTQTRTDDPLEKRVTTVGR-ALPH-LEVKIVDPE 388 (559)
T ss_pred chhhh--eeEecCCCCCHHHHHHHHHHcCCccee-EEEcccccccceeecCcccchhhccCCCCc-cCCC-cEEEEEcCc
Confidence 35666 2233442 334456777778566687 9999999854321111100 111221 2233 223444322
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEee
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
++ .++..|+.+||++... .|+| .|++||+++.. ..-.+.|+||
T Consensus 389 -----------~~-----~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~----~dg~~~~~GR 448 (559)
T PRK08315 389 -----------TG-----ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMD----EEGYVNIVGR 448 (559)
T ss_pred -----------cC-----CcCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEc----CCceEEEEee
Confidence 12 2356899999999553 3333 49999999986 4457899999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.++++++.|++++..+|++++.+.
T Consensus 449 ~d~~i~~~G~~v~~~eIE~~l~~~ 472 (559)
T PRK08315 449 IKDMIIRGGENIYPREIEEFLYTH 472 (559)
T ss_pred ccceEEECCEEEcHHHHHHHHHhC
Confidence 999999999999999999999743
No 90
>PRK07787 acyl-CoA synthetase; Validated
Probab=98.21 E-value=7.9e-05 Score=78.86 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=81.8
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC--CcccceeeecCCCceeEEEeCCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLGN 252 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~ 252 (464)
++++ .+.+|+ ....++++++.+ +.+++ ..||+||+.+.+...... .+...+. ..++. -..+++.+
T Consensus 241 ~~l~---~~~~gg~~~~~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~vG~-~~~g~-~~~i~d~~--- 310 (471)
T PRK07787 241 RGAR---LLVSGSAALPVPVFDRLAALT-GHRPV-ERYGMTETLITLSTRADGERRPGWVGL-PLAGV-ETRLVDED--- 310 (471)
T ss_pred ccee---EEEECCCCCCHHHHHHHHHHc-CCCee-cccCccccCcceecCCCCcccCCcccc-cCCCc-EEEEECCC---
Confidence 5666 445553 235567777777 68888 999999986533211111 0111221 12221 12233211
Q ss_pred cccccccCCCcccccccccCCC-eEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeec-
Q 012409 253 LESQVLCIEPKPVGLTEVKVGE-EYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRR- 313 (464)
Q Consensus 253 ~~~~~~~~~~~~l~l~eve~G~-~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~- 313 (464)
++.+. ..|+ .+||+++.. .|+| -|++||+.++. ..-.+.++||.
T Consensus 311 ---------~~~~~----~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~----~dg~l~~~GR~~ 373 (471)
T PRK07787 311 ---------GGPVP----HDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVD----PDGMHRIVGRES 373 (471)
T ss_pred ---------CCCCC----CCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEc----CCCCEEEeCCCC
Confidence 22221 1243 789999763 4444 29999998886 55679999996
Q ss_pred CceeeeeeeecCHHHHHHHHHH
Q 012409 314 NLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 314 ~~~l~v~GEkv~e~~v~~av~~ 335 (464)
++++++.|+|++..+|++++..
T Consensus 374 d~~i~~~G~~v~~~eIE~~l~~ 395 (471)
T PRK07787 374 TDLIKSGGYRIGAGEIETALLG 395 (471)
T ss_pred ceeEeeCCEEECHHHHHHHHHh
Confidence 8999999999999999999974
No 91
>PLN03052 acetate--CoA ligase; Provisional
Probab=98.20 E-value=0.00012 Score=82.71 Aligned_cols=43 Identities=14% Similarity=0.107 Sum_probs=39.1
Q ss_pred eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 012409 289 YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 289 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
|++||+++++ ..-.+.|+||.|+++|+.|+++...||++++..
T Consensus 591 ~~tGDl~~~d----~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~ 633 (728)
T PLN03052 591 RRHGDIFERT----SGGYYRAHGRADDTMNLGGIKVSSVEIERVCNA 633 (728)
T ss_pred EecCceEEEC----CCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHh
Confidence 8999999987 445799999999999999999999999999863
No 92
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.20 E-value=9.8e-05 Score=78.54 Aligned_cols=130 Identities=12% Similarity=0.027 Sum_probs=82.5
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCC---CcccceeeecCCCceeEEEeCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL---PPELATFAVLPNIGYFEFIPQRLG 251 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~---~~~~~~~~l~~~~~ffEFip~~~~ 251 (464)
.+++ ++..|+ ....++.+++.+ +.+++ ..||+||+....-....+ .+...+. |-..-++.++.+
T Consensus 262 ~~lr---~i~~~g~~~~~~~~~~~~~~~-~~~~~-~~yG~tE~~~~~~~~~~~~~~~~~~~G~---~~~~~~~i~d~~-- 331 (502)
T PRK08276 262 SSLR---VAIHAAAPCPVEVKRAMIDWW-GPIIH-EYYASSEGGGVTVITSEDWLAHPGSVGK---AVLGEVRILDED-- 331 (502)
T ss_pred ccce---EEEecCCCCCHHHHHHHHHHh-CcHhh-hhcccccccceeEecCccccccCCCcce---ecccEEEEECCC--
Confidence 4566 555443 335557777777 56776 899999984311111110 0111221 111223333211
Q ss_pred CcccccccCCCcccccccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecC
Q 012409 252 NLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRN 314 (464)
Q Consensus 252 ~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~ 314 (464)
. .++..|+.+||++++. .|+| .|++||+.++. ..-.+.++||.+
T Consensus 332 ----------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~----~~g~~~~~GR~~ 392 (502)
T PRK08276 332 ----------G-----NELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLD----EDGYLYLTDRKS 392 (502)
T ss_pred ----------C-----CCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEc----CCcCEEEeccCc
Confidence 1 2366899999999843 2222 37899999987 445799999999
Q ss_pred ceeeeeeeecCHHHHHHHHHHH
Q 012409 315 LLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 315 ~~l~v~GEkv~e~~v~~av~~a 336 (464)
+++++.|++++..+|+.++.+.
T Consensus 393 ~~i~~~G~~v~~~~iE~~i~~~ 414 (502)
T PRK08276 393 DMIISGGVNIYPQEIENLLVTH 414 (502)
T ss_pred ceEEeCCEEeCHHHHHHHHHhC
Confidence 9999999999999999999743
No 93
>PRK07798 acyl-CoA synthetase; Validated
Probab=98.19 E-value=8.5e-05 Score=79.10 Aligned_cols=133 Identities=14% Similarity=0.083 Sum_probs=81.2
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeecccccccccee-eecCCCCCCcccceeeecCCCceeEEEeCCCCCc
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWI-GANVNPSLPPELATFAVLPNIGYFEFIPQRLGNL 253 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~-gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~ 253 (464)
++++ .+.+|+ .....+++++.++++++. ..||+||... +......++....+-...+.. -.+.++.+
T Consensus 296 ~~l~---~i~~gG~~~~~~~~~~~~~~~~~~~~~-~~YG~tE~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~---- 366 (533)
T PRK07798 296 SSLF---AIASGGALFSPSVKEALLELLPNVVLT-DSIGSSETGFGGSGTVAKGAVHTGGPRFTIGP-RTVVLDED---- 366 (533)
T ss_pred CceE---EEEECCCCCCHHHHHHHHHHcCCCeEE-eeecccccccccccCCCCCCccCCCCccCCCc-eEEEECCC----
Confidence 4555 555554 335556777778788888 9999999632 221111111111100112222 23444322
Q ss_pred ccccccCCCcccccccccCCCe--EEEEeccc-------------------CceeeeeeCCEEEEecccCCCcEEEEEee
Q 012409 254 ESQVLCIEPKPVGLTEVKVGEE--YEIIVTNV-------------------AGLYRYRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 254 ~~~~~~~~~~~l~l~eve~G~~--YelVvTt~-------------------~GLyRYr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
++ ++++|+. ++++.+.. .|-.-|++||+.++. ..-.+.|+||
T Consensus 367 --------~~-----~~~~g~~~~g~l~~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~----~~g~l~~~GR 429 (533)
T PRK07798 367 --------GN-----PVEPGSGEIGWIARRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVE----ADGTITLLGR 429 (533)
T ss_pred --------CC-----CCCCCCCCeeEEEeecCccccccCChhhhHHhhccCCCCceEEcCcEEEEc----CCCcEEEEcc
Confidence 22 2445665 67766432 121246899999987 4457999999
Q ss_pred cCceeeeeeeecCHHHHHHHHHHH
Q 012409 313 RNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 313 ~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.++++++.|++++..+|++++.+.
T Consensus 430 ~~~~i~~~G~~v~~~eIE~~l~~~ 453 (533)
T PRK07798 430 GSVCINTGGEKVFPEEVEEALKAH 453 (533)
T ss_pred ccceEecCCEEeCHHHHHHHHHhC
Confidence 999999999999999999998743
No 94
>PRK06188 acyl-CoA synthetase; Validated
Probab=98.16 E-value=7.7e-05 Score=79.87 Aligned_cols=63 Identities=21% Similarity=0.200 Sum_probs=53.1
Q ss_pred cccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHH
Q 012409 269 EVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 332 (464)
Q Consensus 269 eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~a 332 (464)
+++.|+.+||++++. .|+| .|++||+.+.. ....+.|.||.++++++.|+++++++|+++
T Consensus 359 ~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~ 434 (524)
T PRK06188 359 EVAQGEVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDVARED----EDGFYYIVDRKKDMIVTGGFNVFPREVEDV 434 (524)
T ss_pred CCCCCCeeEEEEECcchhhhhcCChHHhhhhhcCCceeecceEEEc----CCccEEEEeccccceecCCEEECHHHHHHH
Confidence 467899999999874 3443 49999999987 456788999999999999999999999998
Q ss_pred HHH
Q 012409 333 VDE 335 (464)
Q Consensus 333 v~~ 335 (464)
+.+
T Consensus 435 l~~ 437 (524)
T PRK06188 435 LAE 437 (524)
T ss_pred HHh
Confidence 874
No 95
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=98.14 E-value=1.3e-05 Score=89.69 Aligned_cols=134 Identities=14% Similarity=0.179 Sum_probs=81.2
Q ss_pred CCCceeEEEeecCh--H-HHHHHHHHHhCCCCeeccccccccceeeecCCCC--CCcccceeeecCCCceeEEEeCCCCC
Q 012409 178 PNAKYLSGIMTGSM--E-HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS--LPPELATFAVLPNIGYFEFIPQRLGN 252 (464)
Q Consensus 178 P~l~~i~~~~tG~~--~-~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~--~~~~~~~~~l~~~~~ffEFip~~~~~ 252 (464)
++++ .+.+|+. . .-.+.++..+ |++++ .+||+||+..+...... ..+..+| ..+|+ .-...++.++
T Consensus 420 ~~lr---~i~~GGapl~~~~~~~~~~~~-g~~v~-~~YG~TEt~~~~~~~~~~~~~~gsvG-~p~p~-~evkivd~~~-- 490 (696)
T PLN02387 420 GRIR---FMLSGGAPLSGDTQRFINICL-GAPIG-QGYGLTETCAGATFSEWDDTSVGRVG-PPLPC-CYVKLVSWEE-- 490 (696)
T ss_pred CcEE---EEEEcCCCCCHHHHHHHHHHc-CCCee-EeechhhcccceeecCcccCCCCccC-CCCCc-eEEEEeeccc--
Confidence 4555 5555542 2 2233344456 78988 99999998543322111 1111122 12222 2344554331
Q ss_pred cccccccCCCcccccccccCCCeEEEEecc---cCcee------------------eeeeCCEEEEecccCCCcEEEEEe
Q 012409 253 LESQVLCIEPKPVGLTEVKVGEEYEIIVTN---VAGLY------------------RYRLGDVVKVMGFHNSTPELKFIC 311 (464)
Q Consensus 253 ~~~~~~~~~~~~l~l~eve~G~~YelVvTt---~~GLy------------------RYr~GDvV~v~gf~~~~P~i~f~g 311 (464)
. +..+. -+++..+||++.. +.|+| -|+|||+.++. ..-.+.|+|
T Consensus 491 ~--------~~~~~---~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d----~dG~l~i~g 555 (696)
T PLN02387 491 G--------GYLIS---DKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFH----PDGCLEIID 555 (696)
T ss_pred c--------CcccC---CCCCCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEEC----CCCcEEEEE
Confidence 1 11111 1234468999843 46666 48899999987 556799999
Q ss_pred ecCceeee-eeeecCHHHHHHHHHH
Q 012409 312 RRNLLLTI-NIDKNTEKDLQLSVDE 335 (464)
Q Consensus 312 R~~~~l~v-~GEkv~e~~v~~av~~ 335 (464)
|.++++++ .||++++.+|++++.+
T Consensus 556 R~kd~ik~~~Ge~I~p~eIE~~l~~ 580 (696)
T PLN02387 556 RKKDIVKLQHGEYVSLGKVEAALSV 580 (696)
T ss_pred cccceEECCCCeEEchHHHHHHHhc
Confidence 99999998 5999999999999874
No 96
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=98.13 E-value=0.00015 Score=78.17 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=48.0
Q ss_pred CeEEEEeccc---Cceee----------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 012409 274 EEYEIIVTNV---AGLYR----------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 274 ~~YelVvTt~---~GLyR----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
+.+||+++.. .|+|. |++||+.+.. ..-.+.|+||.++++++.|+|++..+|++++..
T Consensus 383 ~~Gei~v~g~~~~~gy~~~~~~~~~~g~~~TGD~~~~~----~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 453 (539)
T PRK07008 383 AFGDLQVRGPWVIDRYFRGDASPLVDGWFPTGDVATID----ADGFMQITDRSKDVIKSGGEWISSIDIENVAVA 453 (539)
T ss_pred cceEEEEeCCccchhhcCChhhhhcCCCcccCceEEEc----CCCcEEEeecccCEEEeCCeEEcHHHHHHHHHh
Confidence 4689999763 34332 8999999987 345789999999999999999999999999874
No 97
>PRK12467 peptide synthase; Provisional
Probab=98.13 E-value=2.1e-05 Score=102.90 Aligned_cols=120 Identities=19% Similarity=0.281 Sum_probs=80.9
Q ss_pred HHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcc------cceeeecCCCceeEEEeCCCCCcccccccCCCcccc
Q 012409 193 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPE------LATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVG 266 (464)
Q Consensus 193 ~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~------~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~ 266 (464)
.-.+++.+.+++++++ +.||.||+.+.+......... ..| ..+++.. ...++.+ .
T Consensus 786 ~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG-~p~~~~~-~~i~d~~------------~---- 846 (3956)
T PRK12467 786 DLLARVRALGPGARLI-NHYGPTETTVGVSTYELSDEERDFGNVPIG-QPLANLG-LYILDHY------------L---- 846 (3956)
T ss_pred HHHHHHHHhCCCCEEE-eCcCCChhhhheeeEecccccccCCCCccc-CCcCCCE-EEEECCC------------C----
Confidence 4556676777789999 999999986543221110000 011 1223321 2222211 1
Q ss_pred cccccCCCeEEEEeccc---Cceee---------------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeee
Q 012409 267 LTEVKVGEEYEIIVTNV---AGLYR---------------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINID 322 (464)
Q Consensus 267 l~eve~G~~YelVvTt~---~GLyR---------------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GE 322 (464)
..+.+|+.+||+|+.. .|+|+ |||||+++.. ..-.+.|+||.+++++++|+
T Consensus 847 -~~vp~G~~GEL~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~----~dG~l~~~GR~d~~vki~G~ 921 (3956)
T PRK12467 847 -NPVPVGVVGELYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYR----ADGVIEYLGRMDHQVKIRGF 921 (3956)
T ss_pred -CCCCCCCceEEEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEc----CCCcEEEeccccCeEEECCE
Confidence 2467899999999653 44442 9999999987 45679999999999999999
Q ss_pred ecCHHHHHHHHHHH
Q 012409 323 KNTEKDLQLSVDEA 336 (464)
Q Consensus 323 kv~e~~v~~av~~a 336 (464)
++...+|+.++.+.
T Consensus 922 rI~~~eIE~~L~~~ 935 (3956)
T PRK12467 922 RIELGEIEARLLAQ 935 (3956)
T ss_pred ecCHHHHHHHHHhC
Confidence 99999999999753
No 98
>PRK05857 acyl-CoA synthetase; Validated
Probab=98.11 E-value=3e-05 Score=83.73 Aligned_cols=64 Identities=6% Similarity=0.009 Sum_probs=54.3
Q ss_pred ccccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHH
Q 012409 268 TEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 331 (464)
Q Consensus 268 ~eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~ 331 (464)
..++.|+.+||+++.. .|+| -|++||+.++. ..-.+.|+||.++++++.|+|++..+|+.
T Consensus 367 ~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d----~~g~l~~~GR~~~~ik~~G~~v~p~eIE~ 442 (540)
T PRK05857 367 GAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERR----EDGFFYIKGRSSEMIICGGVNIAPDEVDR 442 (540)
T ss_pred ccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccceEEEc----CCceEEEeccccccEecCCEEECHHHHHH
Confidence 4567899999999774 3554 38999999986 55689999999999999999999999999
Q ss_pred HHHH
Q 012409 332 SVDE 335 (464)
Q Consensus 332 av~~ 335 (464)
++..
T Consensus 443 ~l~~ 446 (540)
T PRK05857 443 IAEG 446 (540)
T ss_pred HHHh
Confidence 9974
No 99
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=98.11 E-value=2.5e-05 Score=83.35 Aligned_cols=119 Identities=17% Similarity=0.117 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhCCCCeeccccccccceeeecCC-CC--CCcccceeeecCCCceeEEEeCCCCCcccccccCCCcccccc
Q 012409 192 EHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN-PS--LPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLT 268 (464)
Q Consensus 192 ~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~-~~--~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~ 268 (464)
..-+..+.+.+ +++++ ..||+||+..+.... +. ......+ ...++ ...+.++.+ + .
T Consensus 301 ~~~~~~~~~~~-~~~~~-~~YG~tE~~~~~~~~~~~~~~~~~~~G-~~~~g-~~~~i~d~~------------~-----~ 359 (517)
T PRK08008 301 DQEKDAFEERF-GVRLL-TSYGMTETIVGIIGDRPGDKRRWPSIG-RPGFC-YEAEIRDDH------------N-----R 359 (517)
T ss_pred HHHHHHHHHHh-CCeEE-eeccccccccccccCCccccccCCccc-cCCCC-cEEEEECCC------------C-----C
Confidence 34456666666 78888 999999984322111 10 0000111 11121 223333311 2 2
Q ss_pred cccCCCeEEEEeccc------Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHH
Q 012409 269 EVKVGEEYEIIVTNV------AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKD 328 (464)
Q Consensus 269 eve~G~~YelVvTt~------~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~ 328 (464)
++..|+.+||+++.. .|+| -|++||+.++. ..-.+.|+||.++++++.|++++..+
T Consensus 360 ~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~----~~g~~~~~GR~~d~i~~~G~~i~p~~ 435 (517)
T PRK08008 360 PLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVD----EEGFFYFVDRRCNMIKRGGENVSCVE 435 (517)
T ss_pred CCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEEC----CCCcEEEeecccceEEeCCEEECHHH
Confidence 456899999999742 2332 28999988886 45689999999999999999999999
Q ss_pred HHHHHHH
Q 012409 329 LQLSVDE 335 (464)
Q Consensus 329 v~~av~~ 335 (464)
|+.++.+
T Consensus 436 iE~~l~~ 442 (517)
T PRK08008 436 LENIIAT 442 (517)
T ss_pred HHHHHHh
Confidence 9999874
No 100
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.11 E-value=0.00011 Score=86.44 Aligned_cols=127 Identities=16% Similarity=0.195 Sum_probs=79.0
Q ss_pred CCCceeEEEeecC---hHHHHHHHHHHhCCCCeeccccccccceeeecCCC--CCCcccceeeecCCCceeEEEeCCCCC
Q 012409 178 PNAKYLSGIMTGS---MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLPPELATFAVLPNIGYFEFIPQRLGN 252 (464)
Q Consensus 178 P~l~~i~~~~tG~---~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~--~~~~~~~~~~l~~~~~ffEFip~~~~~ 252 (464)
++++ .+.+|+ ....++.+++.+ +++++ +.||+||+...+...+ ...+...+ ...|+.. ....|.+
T Consensus 907 ~~lr---~v~~gg~~l~~~~~~~~~~~~-~~~~~-~~YG~TE~~~~~~~~~~~~~~~~~vG-~p~~g~~-~~~~~~~--- 976 (1140)
T PRK06814 907 RSLR---YVFAGAEKVKEETRQTWMEKF-GIRIL-EGYGVTETAPVIALNTPMHNKAGTVG-RLLPGIE-YRLEPVP--- 976 (1140)
T ss_pred ccee---EEEEcCCcCCHHHHHHHHHHh-CCcEE-eccccccccceEEecCCCCCCCCcCC-ccCCCCe-EEEeecC---
Confidence 4555 455554 234556666666 78888 9999999843332211 11111111 1122210 1111111
Q ss_pred cccccccCCCcccccccccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecCc
Q 012409 253 LESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNL 315 (464)
Q Consensus 253 ~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~ 315 (464)
..|+.+||.+... .|+| +|++||+.+++ ....+.|+||.++
T Consensus 977 ------------------~~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d----~dG~l~~~GR~~d 1034 (1140)
T PRK06814 977 ------------------GIDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTID----EEGFITIKGRAKR 1034 (1140)
T ss_pred ------------------CCCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEEC----CCCeEEEEecccC
Confidence 1356677777432 2333 59999999997 5568999999999
Q ss_pred eeeeeeeecCHHHHHHHHHHH
Q 012409 316 LLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 316 ~l~v~GEkv~e~~v~~av~~a 336 (464)
++++.|++++..+||+++.+.
T Consensus 1035 ~i~~~G~~v~~~eIE~~l~~~ 1055 (1140)
T PRK06814 1035 FAKIAGEMISLAAVEELAAEL 1055 (1140)
T ss_pred eeeeCCEEECHHHHHHHHHhc
Confidence 999999999999999998753
No 101
>PLN03102 acyl-activating enzyme; Provisional
Probab=98.10 E-value=2.6e-05 Score=85.24 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=51.2
Q ss_pred CCeEEEEecc---cCcee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 273 GEEYEIIVTN---VAGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 273 G~~YelVvTt---~~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
|+.+||++++ ..|+| +|+|||++++. ....+.|+||.++++++.|++++..+|++++.+.
T Consensus 390 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d----~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 465 (579)
T PLN03102 390 KTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIH----PDGHVEIKDRSKDIIISGGENISSVEVENVLYKY 465 (579)
T ss_pred CCceEEEEECcchhhhhcCChhhhHhhhccCceecCceEEEc----CCCeEEEEeccCcEEEECCEEECHHHHHHHHHhC
Confidence 4679999965 35665 59999999986 5568899999999999999999999999999853
No 102
>PRK08308 acyl-CoA synthetase; Validated
Probab=98.09 E-value=0.00014 Score=75.80 Aligned_cols=59 Identities=12% Similarity=-0.003 Sum_probs=50.4
Q ss_pred CCCeEEEEecccCceeeeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 272 VGEEYEIIVTNVAGLYRYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 272 ~G~~YelVvTt~~GLyRYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.|+.+|+++++..| +|+|||+.+.. ..-.+.|+||.++++++.|+|+++.+|++++.+.
T Consensus 278 ~~~~gel~v~~~~~--~~~TGDl~~~~----~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~ 336 (414)
T PRK08308 278 ENAPEEIVVKMGDK--EIFTKDLGYKS----ERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRL 336 (414)
T ss_pred CCCCceEEEEcCCc--eEECCceEEEC----CCccEEEecccCCeEEECCEEECHHHHHHHHHhC
Confidence 46678999988766 57799999986 3457899999999999999999999999999753
No 103
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=98.08 E-value=9.6e-05 Score=75.32 Aligned_cols=44 Identities=9% Similarity=0.044 Sum_probs=39.0
Q ss_pred eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 288 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 288 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
+|++||++++. ...+.|+||.++++++.|++++..+|+.++.+.
T Consensus 235 ~~~TGDl~~~~-----~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~ 278 (358)
T PRK07824 235 WFRTDDLGALD-----DGVLTVLGRADDAISTGGLTVLPQVVEAALATH 278 (358)
T ss_pred ceecccEEEEe-----CCEEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 79999999982 247899999999999999999999999999753
No 104
>PRK12316 peptide synthase; Provisional
Probab=98.08 E-value=1.3e-05 Score=106.74 Aligned_cols=134 Identities=13% Similarity=0.109 Sum_probs=87.5
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCC----CCcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPS----LPPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~----~~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
.|+++ .++++|. .....+++.+.+++++++ +.||.||+.+++..... ..+...|. .+++.. ...++.+
T Consensus 769 ~~~l~--~~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG~-p~~~~~-~~i~d~~- 842 (5163)
T PRK12316 769 CTSLR--RIVCSGEALPADAQEQVFAKLPQAGLY-NLYGPTEAAIDVTHWTCVEEGGDSVPIGR-PIANLA-CYILDAN- 842 (5163)
T ss_pred CCCcc--EEEEeeccCCHHHHHHHHHhCCCCeEE-eCcCcChheeeeeEEecccccCCCCCCcc-ccCCCE-EEEECCC-
Confidence 35677 2344553 224456666667789999 99999999754322111 00111121 223332 1222211
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Ccee--------------------eeeeCCEEEEecccCCCcEE
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY--------------------RYRLGDVVKVMGFHNSTPEL 307 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy--------------------RYr~GDvV~v~gf~~~~P~i 307 (464)
. ..++.|+.+||+|... .|++ -|+|||+++.. ..-.+
T Consensus 843 -----------~-----~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~----~dG~l 902 (5163)
T PRK12316 843 -----------L-----EPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYR----ADGVI 902 (5163)
T ss_pred -----------C-----CCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEEC----CCCCE
Confidence 2 2367899999999542 4444 29999999987 45689
Q ss_pred EEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 308 KFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 308 ~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.|+||.|++++++|+++...+|+.++.+.
T Consensus 903 ~~~GR~d~~ik~~G~rI~~~EIE~~l~~~ 931 (5163)
T PRK12316 903 EYAGRIDHQVKLRGLRIELGEIEARLLEH 931 (5163)
T ss_pred EeecccCCEEEEceEEcChHHHHHHHHhC
Confidence 99999999999999999999999999854
No 105
>PRK05691 peptide synthase; Validated
Probab=98.07 E-value=4.2e-05 Score=100.91 Aligned_cols=134 Identities=13% Similarity=0.137 Sum_probs=87.4
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCC----CCCcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP----SLPPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~----~~~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
.|.|+. .+.+|. .....+++.+.+++++++ +.||.||+.+...... .......| ..+++. -...++.+
T Consensus 1387 ~~~lr~--~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~~~~~~~~~~~~~~~~~~~iG-~p~~~~-~~~i~d~~- 1460 (4334)
T PRK05691 1387 CTSLRR--LFSGGEALPAELRNRVLQRLPQVQLH-NRYGPTETAINVTHWQCQAEDGERSPIG-RPLGNV-LCRVLDAE- 1460 (4334)
T ss_pred CCcccE--EEEeecCCCHHHHHHHHHhCCCcEEE-eCCCcChheeeeeeeecccccCCCCccc-ceeCCC-EEEEECCC-
Confidence 467772 233442 234556777778889999 9999999865432211 00011111 122332 22233211
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Ccee---------------------eeeeCCEEEEecccCCCcE
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLY---------------------RYRLGDVVKVMGFHNSTPE 306 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLy---------------------RYr~GDvV~v~gf~~~~P~ 306 (464)
. ..++.|+.+||+|... .|++ -||+||+++.. ..-.
T Consensus 1461 -----------~-----~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~----~dG~ 1520 (4334)
T PRK05691 1461 -----------L-----NLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWN----ADGA 1520 (4334)
T ss_pred -----------C-----CCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEEC----CCCC
Confidence 2 2467899999999542 2332 28999999987 5568
Q ss_pred EEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 307 LKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 307 i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
+.|+||.+++++++|.++...+|+.++.+.
T Consensus 1521 l~~~GR~d~qiki~G~rie~~eIE~~l~~~ 1550 (4334)
T PRK05691 1521 LEYLGRLDQQVKLRGFRVEPEEIQARLLAQ 1550 (4334)
T ss_pred EEEecccCcEEEECCEEcCHHHHHHHHHhC
Confidence 999999999999999999999999999753
No 106
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=98.07 E-value=3e-05 Score=84.82 Aligned_cols=147 Identities=12% Similarity=0.055 Sum_probs=84.7
Q ss_pred CCCCceeEEEeecC-hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCCceeEEEeCCCCCccc
Q 012409 177 FPNAKYLSGIMTGS-MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLES 255 (464)
Q Consensus 177 WP~l~~i~~~~tG~-~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~ 255 (464)
.++++ ++.+++ ...-.+++.+.+|...++ +.||+||+.+.+..- ...+...+........-+.++..+. +.+.
T Consensus 313 ~~~l~---~~~g~~l~~~~~~~~~~~~~~~~l~-~~YG~tE~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 386 (600)
T PRK08279 313 DHRLR---LMIGNGLRPDIWDEFQQRFGIPRIL-EFYAASEGNVGFINV-FNFDGTVGRVPLWLAHPYAIVKYDV-DTGE 386 (600)
T ss_pred Cccee---EEecCCCCHHHHHHHHHHhCcceee-eeecccccceeeccc-CCCCcccccccccccccceeeeecc-CcCc
Confidence 34665 333443 345567777888555577 999999986543211 1111122221110000122332220 0100
Q ss_pred ccccCCCcccccccccCCCeEEEEec-----ccCcee-------------------eeeeCCEEEEecccCCCcEEEEEe
Q 012409 256 QVLCIEPKPVGLTEVKVGEEYEIIVT-----NVAGLY-------------------RYRLGDVVKVMGFHNSTPELKFIC 311 (464)
Q Consensus 256 ~~~~~~~~~l~l~eve~G~~YelVvT-----t~~GLy-------------------RYr~GDvV~v~gf~~~~P~i~f~g 311 (464)
.. ....-.+.+++.|+.+|+++. .+.|+. -|++||++++. ..-.+.|+|
T Consensus 387 ~i---~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~----~dG~l~~~G 459 (600)
T PRK08279 387 PV---RDADGRCIKVKPGEVGLLIGRITDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDD----GFGHAQFVD 459 (600)
T ss_pred ee---eCCCCccccCCCCCceeEEEEecCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEc----CCccEEEec
Confidence 00 000112245788999999842 122321 28999999887 445799999
Q ss_pred ecCceeeeeeeecCHHHHHHHHHHH
Q 012409 312 RRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 312 R~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
|.++++++.|+|++..+|++++.+.
T Consensus 460 R~~d~ik~~G~~i~p~eIE~~l~~~ 484 (600)
T PRK08279 460 RLGDTFRWKGENVATTEVENALSGF 484 (600)
T ss_pred ccCCeEEECCcccCHHHHHHHHhcC
Confidence 9999999999999999999999853
No 107
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=98.05 E-value=2.3e-05 Score=80.95 Aligned_cols=119 Identities=22% Similarity=0.339 Sum_probs=77.9
Q ss_pred CCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCC--CCC--CcccceeeecCCCceeEEEeCCC
Q 012409 177 FPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVN--PSL--PPELATFAVLPNIGYFEFIPQRL 250 (464)
Q Consensus 177 WP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~--~~~--~~~~~~~~l~~~~~ffEFip~~~ 250 (464)
+++++.|. .+|+ .....+++++.++.++++ ..||+||+....-.. ... .+...+ ..+| ....+.++.+
T Consensus 276 l~~lr~v~--~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~G-~~~~-~~~~~ivd~~- 349 (417)
T PF00501_consen 276 LSSLRTVI--SGGEPLPPDLLRRLRKAFGNAPII-NLYGSTETGSIATIRPPEDDIEKPGSVG-KPLP-GVEVKIVDPN- 349 (417)
T ss_dssp GTT-SEEE--EESST-CHHHHHHHHHHHTTSEEE-EEEEEGGGSSEEEEEETTTHHSSTTSEB-EEST-TEEEEEECTT-
T ss_pred cccccccc--cccccCChhhccccccccccccce-ecccccccceeeeccccccccccccccc-cccc-cccccccccc-
Confidence 45677433 3443 446678888989666888 999999995533211 111 111222 3345 3445666544
Q ss_pred CCcccccccCCCcccccccccCCCeEEEEeccc---Cceee--------------eeeCCEEEEecccCCCcEEEEEeec
Q 012409 251 GNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR--------------YRLGDVVKVMGFHNSTPELKFICRR 313 (464)
Q Consensus 251 ~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~ 313 (464)
+++ +++.|+.+||+++.. .|+|+ |++||++++. ..-.+.++||.
T Consensus 350 ----------~~~-----~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d----~~G~~~~~GR~ 410 (417)
T PF00501_consen 350 ----------TGE-----PLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLD----EDGYLYILGRS 410 (417)
T ss_dssp ----------TSS-----BESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEE----TTSEEEEEEEG
T ss_pred ----------ccc-----cccccccccccccCCccceeeeccccccccccccccceecceEEEEC----CCCeEEEEEee
Confidence 122 356999999999743 55554 9999999997 44699999999
Q ss_pred Cceeeee
Q 012409 314 NLLLTIN 320 (464)
Q Consensus 314 ~~~l~v~ 320 (464)
+++++++
T Consensus 411 ~~~i~~~ 417 (417)
T PF00501_consen 411 DDMIKVR 417 (417)
T ss_dssp SCEEEET
T ss_pred CCEEEeC
Confidence 9999874
No 108
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=98.05 E-value=0.00011 Score=76.51 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=49.3
Q ss_pred CeEEEEeccc---Cceee-------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 012409 274 EEYEIIVTNV---AGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 274 ~~YelVvTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
+.+||++++. .|+|+ |++||++++. ....+.|.||.++++++.|++++..+|++++..
T Consensus 291 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~----~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 364 (436)
T TIGR01923 291 GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELD----GEGFLYVLGRRDDLIISGGENIYPEEIETVLYQ 364 (436)
T ss_pred CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEc----CCCCEEEeccccCeEEeCCEeeCHHHHHHHHHh
Confidence 6689999774 34443 9999999998 446799999999999999999999999999974
No 109
>PRK05691 peptide synthase; Validated
Probab=98.03 E-value=8.8e-05 Score=97.99 Aligned_cols=133 Identities=17% Similarity=0.201 Sum_probs=84.2
Q ss_pred CCCceeEEEeecC-hH-HHHHHHHHHhCCCCeeccccccccceeeecC---CCCCCccc---ceeeecCCCceeEEEeCC
Q 012409 178 PNAKYLSGIMTGS-ME-HYLKKLRHYAGDLPLMSADYGSSEGWIGANV---NPSLPPEL---ATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 178 P~l~~i~~~~tG~-~~-~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~---~~~~~~~~---~~~~l~~~~~ffEFip~~ 249 (464)
|+|++ ++.+|. +. .-.+++.+.++++.++ +.||.||+.+.+.. +....... .| ..+++... +| .+
T Consensus 3983 ~~lr~--~~~gGe~l~~~~~~~~~~~~~~~~l~-n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG-~p~~~~~~--~v-~d 4055 (4334)
T PRK05691 3983 DGLRW--MLPTGEAMPPELARQWLQRYPQIGLV-NAYGPAECSDDVAFFRVDLASTRGSYLPIG-SPTDNNRL--YL-LD 4055 (4334)
T ss_pred CCceE--EEecCCcCCHHHHHHHHHhCCCCeEE-eCccCccceeEEEEEEcccccccCCcCCCC-CccCCCEE--EE-EC
Confidence 56772 344552 22 3334555556789999 99999999764421 11110000 11 01112211 11 12
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEeccc---Cceee---------------------eeeCCEEEEecccCCCc
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIVTNV---AGLYR---------------------YRLGDVVKVMGFHNSTP 305 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVvTt~---~GLyR---------------------Yr~GDvV~v~gf~~~~P 305 (464)
+. . ..|..|..+||+|... .|++. |||||++++. ..-
T Consensus 4056 --~~--------~-----~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~----~dG 4116 (4334)
T PRK05691 4056 --EA--------L-----ELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRR----SDG 4116 (4334)
T ss_pred --CC--------C-----CCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeec----CCC
Confidence 01 1 2366899999999542 44442 9999999997 456
Q ss_pred EEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 306 ELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 306 ~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.++|+||.|++++++|.++...+|+.++.+.
T Consensus 4117 ~l~~~GR~d~qvki~G~riel~eIE~~l~~~ 4147 (4334)
T PRK05691 4117 VLEYVGRIDHQVKIRGYRIELGEIEARLHEQ 4147 (4334)
T ss_pred cEEEecccCCcEEeceEEecHHHHHHHHHhC
Confidence 7999999999999999999999999998753
No 110
>PRK06178 acyl-CoA synthetase; Validated
Probab=98.01 E-value=0.00015 Score=78.65 Aligned_cols=122 Identities=19% Similarity=0.262 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHhCCCCeeccccccccceeeecCCC--CCC-------cccceeeecCCCceeEEEeCCCCCcccccccCC
Q 012409 191 MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNP--SLP-------PELATFAVLPNIGYFEFIPQRLGNLESQVLCIE 261 (464)
Q Consensus 191 ~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~--~~~-------~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~ 261 (464)
.....+.+++.+ +.++....||+||......... ... +...+ ..+|+. -+++++++ +
T Consensus 340 ~~~~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG-~p~~g~-~v~v~d~~-----------~ 405 (567)
T PRK06178 340 NPDYRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVG-LPVPGT-EFKICDFE-----------T 405 (567)
T ss_pred CHHHHHHHHHHh-CCcccccccccccccccceeccccccCccccccCCcccc-cccCCc-EEEEEcCC-----------C
Confidence 345667777777 4555536899999643221111 000 00112 123333 23555433 1
Q ss_pred CcccccccccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecC
Q 012409 262 PKPVGLTEVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNT 325 (464)
Q Consensus 262 ~~~l~l~eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~ 325 (464)
+ ..+..|+.+||++.+. .|+| .|++||+.++. ....+.|+||.++++++.|+|++
T Consensus 406 ~-----~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~----~~g~l~i~GR~~d~i~~~G~~i~ 476 (567)
T PRK06178 406 G-----ELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKID----EQGFLHYLGRRKEMLKVNGMSVF 476 (567)
T ss_pred C-----CcCCCCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEe----cCCeEEEEecccccEEECCEEEC
Confidence 2 2356788999999553 2332 38999999986 44579999999999999999999
Q ss_pred HHHHHHHHHH
Q 012409 326 EKDLQLSVDE 335 (464)
Q Consensus 326 e~~v~~av~~ 335 (464)
..+|++++.+
T Consensus 477 ~~eiE~~l~~ 486 (567)
T PRK06178 477 PSEVEALLGQ 486 (567)
T ss_pred HHHHHHHHHh
Confidence 9999999874
No 111
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=97.99 E-value=6.1e-05 Score=80.31 Aligned_cols=119 Identities=12% Similarity=0.063 Sum_probs=78.1
Q ss_pred HHHHHHHHHhCCCCeeccccccccceeeecCCCCCC--cccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccc
Q 012409 193 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP--PELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEV 270 (464)
Q Consensus 193 ~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~--~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~ev 270 (464)
...+.+++.+ +++++ ..||+||...........+ ....+ ...++ .-++.++ + . + ..+
T Consensus 293 ~~~~~~~~~~-~~~v~-~~YG~tE~~~~~~~~~~~~~~~~~~G-~~~~g-~~v~i~d-~---~--------~-----~~~ 351 (508)
T TIGR02262 293 EVGQRWQARF-GVDIV-DGIGSTEMLHIFLSNLPGDVRYGTSG-KPVPG-YRLRLVG-D---G--------G-----QDV 351 (508)
T ss_pred HHHHHHHHHh-CCchh-hCccccccCceeecCCccCCCCCCcC-CCCCC-cEEEEEC-C---C--------C-----CCC
Confidence 4456677777 68888 9999999742211111110 00111 11122 2244444 2 1 2 235
Q ss_pred cCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHH
Q 012409 271 KVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVD 334 (464)
Q Consensus 271 e~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~ 334 (464)
..|+.+||+++.. .|+| .|++||+.+.. ..-.+.|+||.++++++.|++++..+|++++.
T Consensus 352 ~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~~~~~----~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~ 427 (508)
T TIGR02262 352 AAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDKYVRN----DDGSYTYAGRTDDMLKVSGIYVSPFEIESALI 427 (508)
T ss_pred CCCCeeEEEEecCccccccCCCHHHhHhhhhcCceeccceEEEc----CCccEEEeccccceeeeCCEEECHHHHHHHHH
Confidence 6899999999764 3443 37999988875 44578999999999999999999999999997
Q ss_pred HH
Q 012409 335 EA 336 (464)
Q Consensus 335 ~a 336 (464)
+.
T Consensus 428 ~~ 429 (508)
T TIGR02262 428 QH 429 (508)
T ss_pred hC
Confidence 43
No 112
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=97.97 E-value=0.00039 Score=75.42 Aligned_cols=117 Identities=12% Similarity=0.076 Sum_probs=82.4
Q ss_pred HHHHHHHHHhCCCCeeccccccccceeeecCCCCC--CcccceeeecCCCceeEEEeCCCCCcccccccCCCcccccccc
Q 012409 193 HYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSL--PPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTEV 270 (464)
Q Consensus 193 ~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~--~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~ev 270 (464)
.-...+.+.+ |+++. +.||.||.. ++.+.+.. .++..+ .-+|.. -.+.++.+ + .++
T Consensus 305 e~~~w~~~~~-g~~i~-d~~gqTEtg-~~~~~~~~~~~~g~~g-~p~pG~-~~~vvdd~------------g-----~~~ 362 (528)
T COG0365 305 EAFEWFYSAL-GVWIL-DIYGQTETG-MGFIAGRPPVKNGSSG-LPLPGY-AVRRVDDE------------G-----NPV 362 (528)
T ss_pred HHHHHHHHHh-CCCEe-ccccccccC-ccccCCCCCcCCCCCC-CCCCCc-eeEEECCC------------C-----CcC
Confidence 3446677778 59999 999999987 22222221 111222 223332 23444322 2 235
Q ss_pred cCCCeEEEEeccc-----Cceee-------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHH
Q 012409 271 KVGEEYEIIVTNV-----AGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 332 (464)
Q Consensus 271 e~G~~YelVvTt~-----~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~a 332 (464)
++|+ ++||+... .|+|+ |.+||..... ..-.|-|+||.+|++|+.|-.++..||+++
T Consensus 363 ~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~D----edGy~~i~GR~DDvI~vsG~Rig~~EvE~~ 437 (528)
T COG0365 363 PPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERD----EDGYFWLHGRSDDVIKVSGKRIGPLEIESV 437 (528)
T ss_pred CCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCceeEEc----cCCCEEEEeeccceEeccCeeccHHHHHHH
Confidence 6788 99999753 45777 9999999988 668899999999999999999999999999
Q ss_pred HHHH
Q 012409 333 VDEA 336 (464)
Q Consensus 333 v~~a 336 (464)
+.+.
T Consensus 438 l~~h 441 (528)
T COG0365 438 LLAH 441 (528)
T ss_pred HHhC
Confidence 9854
No 113
>PRK09192 acyl-CoA synthetase; Validated
Probab=97.96 E-value=0.00028 Score=76.92 Aligned_cols=63 Identities=17% Similarity=0.160 Sum_probs=52.3
Q ss_pred cccCCCeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHH
Q 012409 269 EVKVGEEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLS 332 (464)
Q Consensus 269 eve~G~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~a 332 (464)
+++.|+.+||+++.. .|+| .|++||+..+. .-.+.|+||.+++++++|++++..+|+++
T Consensus 405 ~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~~-----~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 405 PLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYLL-----DGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeEE-----CCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 366899999999653 4555 48999998762 24799999999999999999999999999
Q ss_pred HHHH
Q 012409 333 VDEA 336 (464)
Q Consensus 333 v~~a 336 (464)
+++.
T Consensus 480 l~~~ 483 (579)
T PRK09192 480 AEQE 483 (579)
T ss_pred HHhc
Confidence 9864
No 114
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=97.94 E-value=4.3e-05 Score=85.18 Aligned_cols=62 Identities=21% Similarity=0.317 Sum_probs=51.2
Q ss_pred ccCCCeEEEEecc---cCceee-------------eeeCCEEEEecccCCCcEEEEEeecCceeee-eeeecCHHHHHHH
Q 012409 270 VKVGEEYEIIVTN---VAGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQLS 332 (464)
Q Consensus 270 ve~G~~YelVvTt---~~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v-~GEkv~e~~v~~a 332 (464)
+..|..+||+|.. ..|+|+ |+|||+.++. ..-.+.|+||.++++++ .||++++.+|+++
T Consensus 460 ~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d----~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~ 535 (660)
T PLN02430 460 LGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEIL----PNGVLKIIDRKKNLIKLSQGEYVALEYLENV 535 (660)
T ss_pred CCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEEC----CCCcEEEEEcccccEEcCCCcEEchHHHHHH
Confidence 4456789999954 367764 8999999997 44578999999999997 5999999999998
Q ss_pred HHH
Q 012409 333 VDE 335 (464)
Q Consensus 333 v~~ 335 (464)
+.+
T Consensus 536 l~~ 538 (660)
T PLN02430 536 YGQ 538 (660)
T ss_pred Hhc
Confidence 864
No 115
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=97.92 E-value=3.2e-05 Score=85.04 Aligned_cols=130 Identities=22% Similarity=0.337 Sum_probs=91.9
Q ss_pred EEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCCcccceeeecCCCceeEEEeCCCCCcccccccCCC
Q 012409 185 GIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEP 262 (464)
Q Consensus 185 ~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~ 262 (464)
...+|| ..+-...+=+-. |+++. .+||.||..-++..++. ..|.+ + ..+
T Consensus 357 ~~~sGGa~l~~~~~~f~~~l-Gi~i~-eGYGlTEts~~~~v~~~----------------~~~~~------g-----tvG 407 (613)
T COG1022 357 YALSGGAPLSPELLHFFRSL-GIPIL-EGYGLTETSAVVSVNPP----------------DRFVL------G-----TVG 407 (613)
T ss_pred EEEecCCcCCHHHHHHHHHc-CCCeE-EEecccccccceEEccc----------------cCccc------C-----CcC
Confidence 445554 333333333344 69999 99999997555444321 11221 1 147
Q ss_pred cccccccccCCCeEEEEecc---cCceee--------------eeeCCEEEEecccCCCcEEEEEeecCceeee-eeeec
Q 012409 263 KPVGLTEVKVGEEYEIIVTN---VAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKN 324 (464)
Q Consensus 263 ~~l~l~eve~G~~YelVvTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v-~GEkv 324 (464)
++++-.|++.++++||.|-+ +.|+|. |+|||+..++ ..-.+.++||.++++.. +||++
T Consensus 408 ~p~p~~evKI~d~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d----~~g~L~i~gRkK~~i~l~~GknI 483 (613)
T COG1022 408 KPLPGIEVKIADDGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELD----EDGYLVITGRKKELIKLSNGKNI 483 (613)
T ss_pred CcCCCceEEEccCceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEc----CCCcEEEeecccceEECCCCccc
Confidence 78888999999999999955 589999 9999999999 55789999999987765 48999
Q ss_pred CHHHHHHHHHHHHHHhhhcCceEEeEEEeec
Q 012409 325 TEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD 355 (464)
Q Consensus 325 ~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~ 355 (464)
.++-|+..+.+. --+...+++.+
T Consensus 484 aP~~IE~~l~~~--------~~I~qi~vvg~ 506 (613)
T COG1022 484 APEPIESKLAKS--------PLIEQICVVGD 506 (613)
T ss_pred ChHHHHHHHhcC--------CCeeEEEEEec
Confidence 999999977632 23445556654
No 116
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=97.92 E-value=8.2e-05 Score=80.95 Aligned_cols=44 Identities=20% Similarity=0.071 Sum_probs=39.4
Q ss_pred eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 289 YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 289 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
|++||++++. ..-.+.|+||.++++++.|+++...+|++++.+.
T Consensus 432 ~~TGD~~~~~----~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~ 475 (576)
T PRK05620 432 LRTGDVGSVT----RDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAA 475 (576)
T ss_pred EecCceEEEc----CCceEEEEechhhhhhcCCEEEcHHHHHHHHhcC
Confidence 8999999976 4457999999999999999999999999999753
No 117
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=97.90 E-value=0.00025 Score=78.13 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=42.5
Q ss_pred CCeEEEEecc---cCceee--------------eeeCCEEEEecccCCCcEEEEEeecCceeee-eeeecC--HHHHHHH
Q 012409 273 GEEYEIIVTN---VAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNT--EKDLQLS 332 (464)
Q Consensus 273 G~~YelVvTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v-~GEkv~--e~~v~~a 332 (464)
|..+||++.. ..|+|. |+|||+.++.+-......+.|+||.++++++ .|+|++ +.+++.+
T Consensus 409 ~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~ 488 (614)
T PRK08180 409 GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAV 488 (614)
T ss_pred CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHH
Confidence 5567888843 345542 8999999985210122358899999988875 698776 7777776
Q ss_pred HH
Q 012409 333 VD 334 (464)
Q Consensus 333 v~ 334 (464)
+.
T Consensus 489 l~ 490 (614)
T PRK08180 489 SA 490 (614)
T ss_pred hh
Confidence 65
No 118
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=97.90 E-value=9.9e-05 Score=79.64 Aligned_cols=58 Identities=17% Similarity=0.152 Sum_probs=47.6
Q ss_pred CeEEEEecc---cCceee-----------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 012409 274 EEYEIIVTN---VAGLYR-----------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 274 ~~YelVvTt---~~GLyR-----------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
..+||++.. ..|+|. |++||+.++. ..-.+.|+||.++++++.|+|++..+|+.++.+
T Consensus 383 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~~TGDl~~~~----~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 454 (542)
T PRK06018 383 TFGRLKVRGPAVAAAYYRVDGEILDDDGFFDTGDVATID----AYGYMRITDRSKDVIKSGGEWISSIDLENLAVG 454 (542)
T ss_pred ceeEEEEecCCcchhhhcCcccEecCCcEEEcCCEEEEc----CCccEEEEecCCCeEEECCEEECHHHHHHHHHh
Confidence 578999853 235553 9999999876 334789999999999999999999999998874
No 119
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=97.89 E-value=4.9e-05 Score=85.17 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=51.0
Q ss_pred cCCCeEEEEecc---cCceee--------------eeeCCEEEEecccCCCcEEEEEeecCceee-eeeeecCHHHHHHH
Q 012409 271 KVGEEYEIIVTN---VAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRNLLLT-INIDKNTEKDLQLS 332 (464)
Q Consensus 271 e~G~~YelVvTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~-v~GEkv~e~~v~~a 332 (464)
++|..+||+|.. ..|+|+ |+|||+.++. ..-.+.|+||.++++. ..|+++.+.+|+++
T Consensus 503 ~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d----~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~ 578 (700)
T PTZ00216 503 TPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIA----ANGTLRIIGRVKALAKNCLGEYIALEALEAL 578 (700)
T ss_pred CCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEc----CCCcEEEEEehHhheecCCCceeccHHHHHH
Confidence 456678999944 356663 8999999997 4567999999999996 89999999999999
Q ss_pred HHHH
Q 012409 333 VDEA 336 (464)
Q Consensus 333 v~~a 336 (464)
+.+.
T Consensus 579 l~~~ 582 (700)
T PTZ00216 579 YGQN 582 (700)
T ss_pred HhcC
Confidence 8753
No 120
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=97.86 E-value=0.00048 Score=73.79 Aligned_cols=231 Identities=15% Similarity=0.138 Sum_probs=138.5
Q ss_pred EEeecChHHHHHHHHHHhCCCCeeccccccccceee-ecCCCCCCcccceee--ecCCCceeEEEeCCCCCcccccccCC
Q 012409 185 GIMTGSMEHYLKKLRHYAGDLPLMSADYGSSEGWIG-ANVNPSLPPELATFA--VLPNIGYFEFIPQRLGNLESQVLCIE 261 (464)
Q Consensus 185 ~~~tG~~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~g-i~~~~~~~~~~~~~~--l~~~~~ffEFip~~~~~~~~~~~~~~ 261 (464)
++-.|--.+-.+++.+.| |.+-+.+.||||||-++ +|.+.... ..++. +.....=|+.|-.|+ +++++--+++
T Consensus 362 a~GNGLR~diW~~Fv~RF-g~~~IgE~YgaTEgn~~~~N~d~~vG--A~G~~~~~~~~l~p~~LIk~D~-~t~E~iRd~~ 437 (649)
T KOG1179|consen 362 AYGNGLRPDIWQQFVKRF-GIIKIGEFYGATEGNSNLVNYDGRVG--ACGFMSRLLKLLYPFRLIKVDP-ETGEPIRDSQ 437 (649)
T ss_pred EecCCCCchHHHHHHHHc-CCCeEEEEeccccCcceeeeecCccc--cccchhhhhhhccceEEEEecC-CCCceeecCC
Confidence 555665556668888889 65555599999999774 46654421 12221 111223377887773 2222111123
Q ss_pred CcccccccccCCCeEEEEe--------cccCc-----------eee---------eeeCCEEEEecccCCCcEEEEEeec
Q 012409 262 PKPVGLTEVKVGEEYEIIV--------TNVAG-----------LYR---------YRLGDVVKVMGFHNSTPELKFICRR 313 (464)
Q Consensus 262 ~~~l~l~eve~G~~YelVv--------Tt~~G-----------LyR---------Yr~GDvV~v~gf~~~~P~i~f~gR~ 313 (464)
+-- ..+++||.+.||- +.+-| ++| |++||++..+ .---+-|..|+
T Consensus 438 G~C---i~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D----~~GylYF~DRt 510 (649)
T KOG1179|consen 438 GLC---IPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVAD----ELGYLYFKDRT 510 (649)
T ss_pred ceE---EECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEe----cCCcEEEeccC
Confidence 322 2467899997764 22333 333 9999999988 55678999999
Q ss_pred CceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeec-CCCCCceEEEEEEecCCCChHHHHHHHHHHHhhccCc
Q 012409 314 NLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVD-LSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRSFVDA 392 (464)
Q Consensus 314 ~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~-~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~~l~n~ 392 (464)
+|..--.||+++-.||++.+..... ++ ++.-|-+..+ .+++-|-=.+... +..+-.++.+...+.+.| +
T Consensus 511 GDTFRWKGENVsTtEVe~~l~~~~~-~~----dv~VYGV~VP~~EGRaGMAaI~~~---p~~~~d~~~l~~~l~~~L--P 580 (649)
T KOG1179|consen 511 GDTFRWKGENVSTTEVEDVLSALDF-LQ----DVNVYGVTVPGYEGRAGMAAIVLD---PTTEKDLEKLYQHLRENL--P 580 (649)
T ss_pred CCceeecCCcccHHHHHHHHhhhcc-cc----ceeEEEEecCCccCccceEEEEec---CcccchHHHHHHHHHhhC--c
Confidence 9999999999999999998885522 21 3344544433 2223322223211 222224556666676654 7
Q ss_pred chHhhhhcCccCCeEEEEeccchHHHHHHHHhcCCCCCCCCCcCcccC
Q 012409 393 GYVSARKVNAIGPLELRVVLKGTFQQILDHYLGLGAALSQFKTPRCVG 440 (464)
Q Consensus 393 ~Y~~~R~~g~l~pl~v~~v~~GtF~~~~~~~~~~G~~~~Q~K~Pr~~~ 440 (464)
.|+.-|-..-...+ =.-|||+...-..++.|-..++++-|--+-
T Consensus 581 ~YA~P~FlRl~~~i----~~TgTFKl~K~~L~~egf~p~~~~dply~~ 624 (649)
T KOG1179|consen 581 SYARPRFLRLQDEI----EKTGTFKLQKTELQKEGFNPAIISDPLYYL 624 (649)
T ss_pred cccchHHHHHHhhh----hcccchhhHHHHHHHccCCccccCCceEEE
Confidence 77765543212222 246899965555656788888888886543
No 121
>PRK08162 acyl-CoA synthetase; Validated
Probab=97.82 E-value=0.00053 Score=73.81 Aligned_cols=59 Identities=12% Similarity=0.143 Sum_probs=49.5
Q ss_pred CeEEEEeccc---Cceee-------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 274 EEYEIIVTNV---AGLYR-------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 274 ~~YelVvTt~---~GLyR-------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
+.+||+++.. .|+|. |++||++++. ..-.+.|+||.++++++.|++++..+|+.++.+.
T Consensus 387 ~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d----~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~ 461 (545)
T PRK08162 387 TIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLH----PDGYIKIKDRSKDIIISGGENISSIEVEDVLYRH 461 (545)
T ss_pred ceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCceEEEc----CCccEEEEecccceEEeCCEEECHHHHHHHHHhC
Confidence 3699999763 45543 8999999987 4467999999999999999999999999999743
No 122
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=97.75 E-value=0.00061 Score=71.74 Aligned_cols=44 Identities=11% Similarity=0.118 Sum_probs=38.9
Q ss_pred eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 288 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 288 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
.|++||+.++. .-.+.|+||.++++++.|+|++..+|++++.+.
T Consensus 333 ~~~TGD~~~~~-----~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~ 376 (458)
T PRK09029 333 WFATRDRGEWQ-----NGELTILGRLDNLFFSGGEGIQPEEIERVINQH 376 (458)
T ss_pred ccCCCCcEEEe-----CCEEEEecccccceeeCCEEeCHHHHHHHHhcC
Confidence 48999999987 235889999999999999999999999999843
No 123
>PRK12582 acyl-CoA synthetase; Provisional
Probab=97.69 E-value=0.00031 Score=77.45 Aligned_cols=64 Identities=23% Similarity=0.326 Sum_probs=46.8
Q ss_pred cCCCeEEEEecc---cCceee--------------eeeCCEEEEecccCCCcEEEEEeecCceeee-eeeecCHHHHH--
Q 012409 271 KVGEEYEIIVTN---VAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTI-NIDKNTEKDLQ-- 330 (464)
Q Consensus 271 e~G~~YelVvTt---~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v-~GEkv~e~~v~-- 330 (464)
..|+.+||++.. ..|+|. |++||+.++..-......+.|+||.++++++ .|+|++..+++
T Consensus 419 ~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e 498 (624)
T PRK12582 419 PVGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPD 498 (624)
T ss_pred cCCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHH
Confidence 468889999944 356663 9999999985221123468899999999986 69999988775
Q ss_pred HHHH
Q 012409 331 LSVD 334 (464)
Q Consensus 331 ~av~ 334 (464)
.++.
T Consensus 499 ~~l~ 502 (624)
T PRK12582 499 AVAA 502 (624)
T ss_pred HHHh
Confidence 4444
No 124
>PLN02479 acetate-CoA ligase
Probab=97.64 E-value=0.00037 Score=75.74 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=49.1
Q ss_pred CeEEEEeccc---Ccee-------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHH
Q 012409 274 EEYEIIVTNV---AGLY-------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDE 335 (464)
Q Consensus 274 ~~YelVvTt~---~GLy-------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~ 335 (464)
+.+||+++.. .|+| .|++||+.++. ..-++.|+||.++++++.|++++..+|+.++.+
T Consensus 401 ~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~ 474 (567)
T PLN02479 401 TMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKH----PDGYIEIKDRSKDIIISGGENISSLEVENVVYT 474 (567)
T ss_pred CceEEEEeccchhhhhhcCcccccchhcCCceecceeEEEc----CCccEEEeccccceEEeCCEEEcHHHHHHHHHh
Confidence 5799999753 3444 39999999986 556799999999999999999999999999974
No 125
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=97.46 E-value=0.0015 Score=69.02 Aligned_cols=63 Identities=16% Similarity=0.343 Sum_probs=56.2
Q ss_pred cccCCCeEEEEe---cccCceee--------------eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHH
Q 012409 269 EVKVGEEYEIIV---TNVAGLYR--------------YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 331 (464)
Q Consensus 269 eve~G~~YelVv---Tt~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~ 331 (464)
+++.|..+||++ +|..|+|- |++||+-... ..-.++++||.+|||..+||++.+.+|++
T Consensus 426 ~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~----enG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 426 EVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMD----ENGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred ccccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEc----CCCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 577888899999 77888887 9999999887 55789999999999999999999999999
Q ss_pred HHHH
Q 012409 332 SVDE 335 (464)
Q Consensus 332 av~~ 335 (464)
.+.+
T Consensus 502 fL~~ 505 (596)
T KOG1177|consen 502 FLNK 505 (596)
T ss_pred HHhh
Confidence 8874
No 126
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=97.20 E-value=0.0018 Score=67.87 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=39.7
Q ss_pred eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 289 YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 289 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
|++||+.++. ....+.|+||.++++++.|+|+++.+|++++.+.
T Consensus 277 ~~tgD~g~~d----~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~ 320 (386)
T TIGR02372 277 LDLQDRLAWD----KDGGFTILGRKDEILQVGGVNVSPGHVRDILERN 320 (386)
T ss_pred eecCceEEEc----CCCcEEEecccCCEEEECCEEEcHHHHHHHHHcC
Confidence 6899998876 5678999999999999999999999999999853
No 127
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=97.06 E-value=0.0025 Score=70.44 Aligned_cols=136 Identities=16% Similarity=0.189 Sum_probs=90.2
Q ss_pred cccCCCCceeEEEeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecCCCCCC--cccceeeecCCCceeEEEeCC
Q 012409 174 PELFPNAKYLSGIMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANVNPSLP--PELATFAVLPNIGYFEFIPQR 249 (464)
Q Consensus 174 ~~lWP~l~~i~~~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~~~~~~--~~~~~~~l~~~~~ffEFip~~ 249 (464)
..||+|.+ .+++|+ +..-...+-...-|++++ ++||.||+.-|..+....+ .+.+| ..+|. +-.=++++.
T Consensus 415 ~~LGg~vr---~~~sGaAPls~ev~~F~r~~~g~~v~-eGYGlTEts~g~~~~~~~d~~lgsvG-~p~p~-~~vKL~dvp 488 (691)
T KOG1256|consen 415 QSLGGNVR---LIISGAAPLSPEVLTFFRAALGCRVL-EGYGLTETSAGTTLTLPGDNVLGSVG-PPVPG-NEVKLVDVP 488 (691)
T ss_pred HHhcCcee---EEEecCCCCCHHHHHHHHHhcCceee-ecccccccCCceEeccCCCCCCCCcC-CcccC-ceEEEechH
Confidence 36888887 777885 333333333334479999 9999999985543321111 11122 12232 222333333
Q ss_pred CCCcccccccCCCcccccccccCCCeEEEEe---cccCceee--------------eeeCCEEEEecccCCCcEEEEEee
Q 012409 250 LGNLESQVLCIEPKPVGLTEVKVGEEYEIIV---TNVAGLYR--------------YRLGDVVKVMGFHNSTPELKFICR 312 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~l~l~eve~G~~YelVv---Tt~~GLyR--------------Yr~GDvV~v~gf~~~~P~i~f~gR 312 (464)
|.+ --..|..+||.| +-+.|+|- ..+||+=++. ..-.+.+.+|
T Consensus 489 --e~n--------------y~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~----p~G~l~IidR 548 (691)
T KOG1256|consen 489 --EMN--------------YDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWD----PNGTLKIIDR 548 (691)
T ss_pred --HhC--------------cCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeEC----CCccEEEEec
Confidence 121 112466899999 55689888 8999999988 5678999999
Q ss_pred cCceeeee-eeecCHHHHHHHHHH
Q 012409 313 RNLLLTIN-IDKNTEKDLQLSVDE 335 (464)
Q Consensus 313 ~~~~l~v~-GEkv~e~~v~~av~~ 335 (464)
.++++.+. ||.|.++.|+++..+
T Consensus 549 kK~ifklaqGEyVaPe~IEniy~~ 572 (691)
T KOG1256|consen 549 KKNIFKLAQGEYVAPEKIENIYKR 572 (691)
T ss_pred ccceEEcCCCCccChHHHHHHHhc
Confidence 99999887 799999999999985
No 128
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=95.26 E-value=0.055 Score=45.29 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=51.0
Q ss_pred eeecCHHHHHHHHHHHHHHhhhcCceEE-eEEEeecCCCCCceEEEEEEecCCCC--hHHHHHHHHHHHhhccCcchHhh
Q 012409 321 IDKNTEKDLQLSVDEAAQLLAEEKQEVV-DFTSHVDLSTDPGHYVIFWEVSGEVN--DEVLKECCNCLDRSFVDAGYVSA 397 (464)
Q Consensus 321 GEkv~e~~v~~av~~a~~~l~~~~~~l~-~f~~~~~~~~~p~hY~~~~E~~~~~~--~~~l~~~~~~ld~~l~n~~Y~~~ 397 (464)
|.++++++|+++|.+. . .+. +|.+.......-.+..+.+|...... .+..+++++.+.+++
T Consensus 1 GvnvfP~~Ie~vl~~~-~-------~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~l-------- 64 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREF-P-------EVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERL-------- 64 (96)
T ss_dssp TEEE-HHHHHHHHCTS-T-------TEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHH--------
T ss_pred CcEECHHHHHHHHHhC-c-------CCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHH--------
Confidence 6789999999999854 1 344 78876663333345668888865432 235667777777765
Q ss_pred hhcCccCCeEEEEeccchHHH
Q 012409 398 RKVNAIGPLELRVVLKGTFQQ 418 (464)
Q Consensus 398 R~~g~l~pl~v~~v~~GtF~~ 418 (464)
|+...+.| +|.+|++|++.+
T Consensus 65 k~~lgv~~-~V~lv~~gtLpr 84 (96)
T PF14535_consen 65 KERLGVRP-EVELVPPGTLPR 84 (96)
T ss_dssp HHHHSS-E-EEEEE-TT-S--
T ss_pred HhhcCceE-EEEEECCCCccC
Confidence 54433665 999999999987
No 129
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.32 E-value=0.52 Score=51.99 Aligned_cols=62 Identities=16% Similarity=0.344 Sum_probs=48.8
Q ss_pred cccCCCeEEEEeccc---Ccee--------------eeeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHH
Q 012409 269 EVKVGEEYEIIVTNV---AGLY--------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQL 331 (464)
Q Consensus 269 eve~G~~YelVvTt~---~GLy--------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~ 331 (464)
.+..|..+|+.++-. .|++ -|++||++|.. ..-.++|+||.+..+.++|..+-..+|+.
T Consensus 561 ~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~----~dg~~e~lgr~D~qvki~g~Riel~eie~ 636 (642)
T COG1020 561 PLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPL----ADGALEYLGRKDSQVKIRGFRIELGEIEA 636 (642)
T ss_pred cCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeEC----CCCeEEEeccccceeEeceEecCcHHHHH
Confidence 456788889988654 3321 39999999944 55689999999999999999997778877
Q ss_pred HHH
Q 012409 332 SVD 334 (464)
Q Consensus 332 av~ 334 (464)
++.
T Consensus 637 ~l~ 639 (642)
T COG1020 637 ALA 639 (642)
T ss_pred HHh
Confidence 665
No 130
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=92.32 E-value=1.8 Score=47.14 Aligned_cols=141 Identities=18% Similarity=0.202 Sum_probs=83.2
Q ss_pred EeecC--hHHHHHHHHHHhCCCCeeccccccccceeeecC-CCCCCcccceeeecC-CCceeEEEeCCCCCcccccccCC
Q 012409 186 IMTGS--MEHYLKKLRHYAGDLPLMSADYGSSEGWIGANV-NPSLPPELATFAVLP-NIGYFEFIPQRLGNLESQVLCIE 261 (464)
Q Consensus 186 ~~tG~--~~~Y~~~l~~~~~~~~~~~~~y~aSEg~~gi~~-~~~~~~~~~~~~l~~-~~~ffEFip~~~~~~~~~~~~~~ 261 (464)
+.+|+ .++=.+++-..+=..|+. .+||-||..-|-.+ ++.+. ..+-+-.| -++++-.++.++ .+ ..
T Consensus 407 ~LsGGapLS~dtQrF~nic~C~Pv~-qGYGLTEtca~~tv~e~~d~--~~g~vG~pl~c~eiKLvdw~E--gG-----Y~ 476 (678)
T KOG1180|consen 407 ILSGGAPLSPDTQRFMNICFCCPVL-QGYGLTETCAAATVLEPEDF--STGRVGAPLPCCEIKLVDWEE--GG-----YF 476 (678)
T ss_pred EEeCCCCCCHHHHHHHHHhcccccc-ccccccchhcccEecChhhc--ccccccCCccceEEEEEEhhh--cC-----cc
Confidence 34443 233345554433267999 99999998764433 22221 11111112 244555555441 10 00
Q ss_pred CcccccccccCCC--eEEEEeccc---Ccee-----------------eeeeCCEEEEecccCCCcEEEEEeecCceeee
Q 012409 262 PKPVGLTEVKVGE--EYEIIVTNV---AGLY-----------------RYRLGDVVKVMGFHNSTPELKFICRRNLLLTI 319 (464)
Q Consensus 262 ~~~l~l~eve~G~--~YelVvTt~---~GLy-----------------RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v 319 (464)
+ .+. ++|++|+-. .|+| -|++|||-+++ ..-++++..|+++++.+
T Consensus 477 ~---------~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~----pdG~LkIIDRKKdLVKl 543 (678)
T KOG1180|consen 477 A---------KNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFH----PDGCLKIIDRKKDLVKL 543 (678)
T ss_pred C---------CCCCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceec----CCCcEEEeechhhhhhh
Confidence 0 111 567777322 3444 48999999998 66799999999998875
Q ss_pred -eeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCC
Q 012409 320 -NIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLS 357 (464)
Q Consensus 320 -~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~ 357 (464)
+||=++=.-|+.|+... --|.+.++++|..
T Consensus 544 q~GEYIsL~KvEa~l~s~--------p~V~NICvyAd~~ 574 (678)
T KOG1180|consen 544 QNGEYISLGKVEAALRSS--------PYVDNICVYADSN 574 (678)
T ss_pred cccceeehHHHHHHHhcC--------cchhheEEecccc
Confidence 59999999888887632 1233667788853
No 131
>PRK09188 serine/threonine protein kinase; Provisional
Probab=88.12 E-value=4.1 Score=42.52 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=32.4
Q ss_pred eeeeCCEEEEecccCCCcEEEEEeecCceeeeee---eecCHHHHHHHHHHH
Q 012409 288 RYRLGDVVKVMGFHNSTPELKFICRRNLLLTINI---DKNTEKDLQLSVDEA 336 (464)
Q Consensus 288 RYr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~G---Ekv~e~~v~~av~~a 336 (464)
-|+|||+.++. ...-.+.|+||.+ .| |++++. |++++.+.
T Consensus 210 W~~TGDlg~~~---d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~h 252 (365)
T PRK09188 210 WLATGKKVYNF---ITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSD 252 (365)
T ss_pred EEeCCCEEEEE---cCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhC
Confidence 48899999872 1455699999998 78 899999 99888754
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=81.16 E-value=18 Score=37.86 Aligned_cols=94 Identities=20% Similarity=0.287 Sum_probs=56.3
Q ss_pred HHHHHHHHHhCC---CCeeccccccccceeeecCCCCCCcccceeeecCCCceeEEEeCCCCCcccccccCCCccccccc
Q 012409 193 HYLKKLRHYAGD---LPLMSADYGSSEGWIGANVNPSLPPELATFAVLPNIGYFEFIPQRLGNLESQVLCIEPKPVGLTE 269 (464)
Q Consensus 193 ~Y~~~l~~~~~~---~~~~~~~y~aSEg~~gi~~~~~~~~~~~~~~l~~~~~ffEFip~~~~~~~~~~~~~~~~~l~l~e 269 (464)
.+.+.+++.+|- -.++ ..||+||... . .+..+...++. | .+ .+--| |.+ +.+
T Consensus 243 ef~~~l~~~~Gv~~~~~i~-~~ygmtEl~s-~----~~~~~~~~~~~-p--~w--V~iRD------------p~t--l~~ 297 (365)
T PF04443_consen 243 EFYARLQEVFGVIPIENIY-DMYGMTELNS-Q----AYECGHGHFHV-P--PW--VIIRD------------PET--LEP 297 (365)
T ss_pred HHHHHHHHHHCCCCHHHee-eeeeccccch-h----heeCCCCcccC-C--Ce--EEEEC------------CCC--CcC
Confidence 677888888833 2555 9999999532 1 11111222221 2 12 22222 333 357
Q ss_pred ccCCCeEEEEeccc-----CceeeeeeCCEEEEecccCC-----CcEEEEEeecC
Q 012409 270 VKVGEEYEIIVTNV-----AGLYRYRLGDVVKVMGFHNS-----TPELKFICRRN 314 (464)
Q Consensus 270 ve~G~~YelVvTt~-----~GLyRYr~GDvV~v~gf~~~-----~P~i~f~gR~~ 314 (464)
|+.|+.+-|.+-+. -|. =-|.|+-.+.+ .+. .+.|+++||.+
T Consensus 298 ~~~Ge~Gli~vidl~~~s~p~~--IlTeDlGvl~~-~~~c~cr~g~~f~vlGR~~ 349 (365)
T PF04443_consen 298 LPPGETGLIQVIDLANTSYPGF--ILTEDLGVLHG-DDDCGCRKGKYFEVLGRAD 349 (365)
T ss_pred CCCCCeeEEEEEcccccCCCcE--EEEcceeeecC-CCCCCCccCCEEEEEeCCC
Confidence 88999999988333 344 45899996665 222 35899999998
No 133
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech
Probab=57.84 E-value=69 Score=24.78 Aligned_cols=54 Identities=22% Similarity=0.324 Sum_probs=33.1
Q ss_pred HHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCCChHHHHHHHHHHHh
Q 012409 333 VDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 387 (464)
Q Consensus 333 v~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~ 387 (464)
+.++...+++.|+.+....+.. ....++.|.+|+|+.+..++...+.+.+.|++
T Consensus 13 L~~vL~~f~~~~vni~~I~Srp-~~~~~~~~~f~id~~~~~~~~~~~~~l~~l~~ 66 (75)
T cd04880 13 LAKALKVFAERGINLTKIESRP-SRKGLWEYEFFVDFEGHIDDPDVKEALEELKR 66 (75)
T ss_pred HHHHHHHHHHCCCCEEEEEeee-cCCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 3333344556788888665443 33457889999999765344445555555554
No 134
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=52.26 E-value=92 Score=25.77 Aligned_cols=56 Identities=14% Similarity=0.205 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCCChHHHHHHHHHHHh
Q 012409 326 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 387 (464)
Q Consensus 326 e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~ 387 (464)
+-.+..++. .++..|+.+...-+.+ ....++.|.+|+|+++. .++.++...+.|.+
T Consensus 25 pGsL~~vL~----~Fa~~~INLt~IeSRP-~~~~~~~Y~FfVDieg~-~~~~~~~~l~~L~~ 80 (90)
T cd04931 25 VGALAKVLR----LFEEKDINLTHIESRP-SRLNKDEYEFFINLDKK-SAPALDPIIKSLRN 80 (90)
T ss_pred CcHHHHHHH----HHHHCCCCEEEEEecc-CCCCCceEEEEEEEEcC-CCHHHHHHHHHHHH
Confidence 334445554 4446788888766654 33356789999999764 23334444444444
No 135
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=51.08 E-value=12 Score=44.01 Aligned_cols=44 Identities=18% Similarity=0.161 Sum_probs=39.1
Q ss_pred eeeCCEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHH
Q 012409 289 YRLGDVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEA 336 (464)
Q Consensus 289 Yr~GDvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a 336 (464)
||+||..|.. ..--++|.||.++.+.++|-++.=.++.+++..-
T Consensus 456 y~tgD~gr~l----~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~ 499 (1032)
T KOG1178|consen 456 YRTGDNGRSL----KNGGLEISGRADRQIKDRGVRIELGELNTVVEVH 499 (1032)
T ss_pred ccccccceee----cCCCEEEEEeccceEEEccEEEehhhhchhhccC
Confidence 9999999988 5667899999999999999999988888888754
No 136
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=49.02 E-value=47 Score=26.11 Aligned_cols=47 Identities=26% Similarity=0.230 Sum_probs=35.8
Q ss_pred eecCHHHHHHHHHHHHHHhhh-cCceEEeEEEeecCCCCCceEEEEEEe
Q 012409 322 DKNTEKDLQLSVDEAAQLLAE-EKQEVVDFTSHVDLSTDPGHYVIFWEV 369 (464)
Q Consensus 322 Ekv~e~~v~~av~~a~~~l~~-~~~~l~~f~~~~~~~~~p~hY~~~~E~ 369 (464)
++-.|+.+++||.+|.+++.. .++++.+.....+. +.-.||.+-+.+
T Consensus 13 ~~S~edAv~~Av~~A~kTl~ni~~~eV~e~~~~v~d-g~i~~y~v~lkv 60 (66)
T PF07311_consen 13 PKSWEDAVQNAVARASKTLRNIRWFEVKEQRGHVED-GKITEYQVNLKV 60 (66)
T ss_dssp SSHHHHHHHHHHHHHHHHSSSEEEEEEEEEEEEEET-TCEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhchhCcEEEEEEEEEEEEeC-CcEEEEEEEEEE
Confidence 556789999999999888764 47788888887665 345689877765
No 137
>PRK11899 prephenate dehydratase; Provisional
Probab=47.32 E-value=1.7e+02 Score=29.38 Aligned_cols=57 Identities=11% Similarity=0.098 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCCChHHHHHHHHHHHh
Q 012409 326 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 387 (464)
Q Consensus 326 e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~ 387 (464)
+-.+.+++.. .+..|+.++-.-+.+ ....++.|.+|+|+.+...+...++..+.|.+
T Consensus 205 pGaL~~vL~~----Fa~~gINLtkIeSRP-~~~~~~~Y~F~id~eg~~~d~~v~~aL~~l~~ 261 (279)
T PRK11899 205 PAALYKALGG----FATNGVNMTKLESYM-VGGSFTATQFYADIEGHPEDRNVALALEELRF 261 (279)
T ss_pred CChHHHHHHH----HHHcCCCeeeEEeee-cCCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4445555544 445788888666654 44578999999999875444334444444443
No 138
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=44.89 E-value=14 Score=34.00 Aligned_cols=36 Identities=19% Similarity=0.402 Sum_probs=29.3
Q ss_pred eeeeeeCCEEEEec---ccCCCcEEEEEeecCceeeeee
Q 012409 286 LYRYRLGDVVKVMG---FHNSTPELKFICRRNLLLTINI 321 (464)
Q Consensus 286 LyRYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~v~G 321 (464)
|--|+.||+|-+.+ ++.+.|.=.|.||++.+.|++|
T Consensus 31 l~~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~ 69 (160)
T PTZ00189 31 LTTFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTP 69 (160)
T ss_pred HHHccCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 44599999999886 4456788889999999888875
No 139
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]
Probab=44.80 E-value=1.7e+02 Score=29.53 Aligned_cols=86 Identities=21% Similarity=0.317 Sum_probs=51.5
Q ss_pred EecccCCCcEEEEEeec------C---ceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEE
Q 012409 297 VMGFHNSTPELKFICRR------N---LLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFW 367 (464)
Q Consensus 297 v~gf~~~~P~i~f~gR~------~---~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~ 367 (464)
|.+..++.-||-+++|. + ..+-+....--+-.+.+++ ..++..|+.++-.-+. +..+.++.|.+|+
T Consensus 167 I~D~~~N~TRF~vl~r~~~~~~~~~~~kTsl~f~~~n~PGaL~~~L----~~Fa~~gINlTkIESR-P~k~~~~~Y~F~i 241 (279)
T COG0077 167 IEDEPNNRTRFLVLSRRKPPSVSDGPEKTSLIFSVPNKPGALYKAL----GVFAKRGINLTKIESR-PLKTGLGEYLFFI 241 (279)
T ss_pred ccCCCCCeEEEEEEeccCCCCcCCCCceEEEEEEcCCCCchHHHHH----HHHHHcCcceeeEeec-ccCCCCeeEEEEE
Confidence 66677788888888873 1 2223333333444444444 4455678887755444 3445789999999
Q ss_pred EecCCCChHHHHHHHHHHHh
Q 012409 368 EVSGEVNDEVLKECCNCLDR 387 (464)
Q Consensus 368 E~~~~~~~~~l~~~~~~ld~ 387 (464)
|+.+..++...++..++|.+
T Consensus 242 D~eg~~~~~~v~~AL~el~~ 261 (279)
T COG0077 242 DIEGHIDDPLVKEALEELKE 261 (279)
T ss_pred EEecCcCcHhHHHHHHHHHh
Confidence 99876555434444334433
No 140
>PRK11898 prephenate dehydratase; Provisional
Probab=43.62 E-value=1.9e+02 Score=29.09 Aligned_cols=57 Identities=21% Similarity=0.302 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCCChHHHHHHHHHHHh
Q 012409 326 EKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 387 (464)
Q Consensus 326 e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~ 387 (464)
+-.+.+++. .++..|+.++..-+.+ ....++.|.+|+|+++..++..++...+.|.+
T Consensus 208 pGsL~~~L~----~F~~~~INLt~IeSRP-~~~~~~~y~F~vd~eg~~~~~~~~~al~~L~~ 264 (283)
T PRK11898 208 PGALYKALS----EFAWRGINLTRIESRP-TKTGLGTYFFFIDVEGHIDDVLVAEALKELEA 264 (283)
T ss_pred ccHHHHHHH----HHHHCCCCeeeEeccc-CCCCCccEEEEEEEEccCCCHHHHHHHHHHHH
Confidence 444555555 4445788888766653 34467899999999775554345555455544
No 141
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=43.01 E-value=17 Score=30.63 Aligned_cols=37 Identities=22% Similarity=0.451 Sum_probs=28.5
Q ss_pred eeeeeeCCEEEEe---cccCCCcEEEEEeecCceeeeeee
Q 012409 286 LYRYRLGDVVKVM---GFHNSTPELKFICRRNLLLTINID 322 (464)
Q Consensus 286 LyRYr~GDvV~v~---gf~~~~P~i~f~gR~~~~l~v~GE 322 (464)
|.-|..||.|-++ .++.+.|.=+|.||++.+....|.
T Consensus 30 l~ey~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g~ 69 (98)
T COG2139 30 LQEYKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRGR 69 (98)
T ss_pred HhhccCCCEEEEEeCcccccCCCCccccCcceEEEeccCC
Confidence 5668899999876 455667877899999988877763
No 142
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxy
Probab=39.96 E-value=1.6e+02 Score=22.95 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=28.5
Q ss_pred HHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCCChHHHHHHHHHHHh
Q 012409 338 QLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 387 (464)
Q Consensus 338 ~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~ 387 (464)
..++..|+.+...-+.+ ....++.|.+|+|+.+ .+. ..++..+.|.+
T Consensus 19 ~~f~~~~iNlt~IeSRP-~~~~~~~y~Ffvd~~~-~~~-~~~~~l~~L~~ 65 (74)
T cd04904 19 KLFEEFGVNLTHIESRP-SRRNGSEYEFFVDCEV-DRG-DLDQLISSLRR 65 (74)
T ss_pred HHHHHCCCcEEEEECCC-CCCCCceEEEEEEEEc-ChH-HHHHHHHHHHH
Confidence 34446788888665543 3446788999999976 222 24444444443
No 143
>PLN00190 60S ribosomal protein L21; Provisional
Probab=39.61 E-value=19 Score=33.15 Aligned_cols=36 Identities=19% Similarity=0.427 Sum_probs=28.9
Q ss_pred eeeeeeCCEEEEec---ccCCCcEEEEEeecCceeeeee
Q 012409 286 LYRYRLGDVVKVMG---FHNSTPELKFICRRNLLLTINI 321 (464)
Q Consensus 286 LyRYr~GDvV~v~g---f~~~~P~i~f~gR~~~~l~v~G 321 (464)
|.-|+.||+|-+.+ ++.+.|.=.|.||++.+.|++|
T Consensus 31 l~~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~ 69 (158)
T PLN00190 31 LRTFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTK 69 (158)
T ss_pred HHHhcCCCEEEEEecCCeecCCCcccccCCCeEEEeecC
Confidence 44599999999885 4456787789999999888875
No 144
>smart00160 RanBD Ran-binding domain. Domain of apporximately 150 residues that stabilises the GTP-bound form of Ran (the Ras-like nuclear small GTPase).
Probab=37.93 E-value=63 Score=28.54 Aligned_cols=51 Identities=33% Similarity=0.608 Sum_probs=32.8
Q ss_pred ccccCCCeEEEEeccc-Cceeeee----------eCCEEEEecccCCC-cEEEEEeecCceeeee
Q 012409 268 TEVKVGEEYEIIVTNV-AGLYRYR----------LGDVVKVMGFHNST-PELKFICRRNLLLTIN 320 (464)
Q Consensus 268 ~eve~G~~YelVvTt~-~GLyRYr----------~GDvV~v~gf~~~~-P~i~f~gR~~~~l~v~ 320 (464)
.|++.|++-|-++-+. +=||||. +|+ +++--- ..+ -+.+++.|.+...++.
T Consensus 10 ve~~tgEE~E~~lf~~r~KL~~~~~~~~~WkerG~G~-lki~~~-~~~~~~~RivmR~~~~~kv~ 72 (130)
T smart00160 10 VEVKTGEEDEEVIFSARAKLYRFANDKKEWKERGVGD-LKILKS-KDNGGKVRIVMRRDGVLKVC 72 (130)
T ss_pred ccccCCCcCeEEEEEEEeEEEEEcCCCCCCeeccEEE-EEEEEc-CCCCCeEEEEEEECCCceEE
Confidence 5788899888666554 5599997 443 333211 123 4788999988655544
No 145
>PF11454 DUF3016: Protein of unknown function (DUF3016); InterPro: IPR021557 This is a bacterial family of uncharacterised proteins.
Probab=37.05 E-value=75 Score=28.76 Aligned_cols=55 Identities=22% Similarity=0.317 Sum_probs=38.0
Q ss_pred ccCCCeEEEEeccc--Cceeee----eeCCEEEEe-cccCCCcEEEEEeec----CceeeeeeeecCHH
Q 012409 270 VKVGEEYEIIVTNV--AGLYRY----RLGDVVKVM-GFHNSTPELKFICRR----NLLLTINIDKNTEK 327 (464)
Q Consensus 270 ve~G~~YelVvTt~--~GLyRY----r~GDvV~v~-gf~~~~P~i~f~gR~----~~~l~v~GEkv~e~ 327 (464)
|++|+.-+|.||.. +|-+++ ..+|+ ||+ .- -.|+|+|.+.. +.++.-.-||++..
T Consensus 47 Lp~gq~L~v~VtDvDLAG~~~P~~~~~~~dv-Rvvkdi--~pPRI~l~Y~L~d~~G~vi~~g~e~L~Dm 112 (141)
T PF11454_consen 47 LPPGQTLEVTVTDVDLAGDVEPFWGSGANDV-RVVKDI--YPPRIELSYTLTDADGKVIKQGEEKLKDM 112 (141)
T ss_pred CCCCCEEEEEEEecccCcccccCcCCCCCcE-EEEccC--CCCcEEEEEEEECCCCcEEEecceEEecc
Confidence 78999999999996 997776 44554 555 33 45899887764 34555444666655
No 146
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=33.06 E-value=2.1e+02 Score=23.99 Aligned_cols=101 Identities=12% Similarity=0.177 Sum_probs=51.7
Q ss_pred EEeecCceeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCCChHHHHHHHHHHHhh
Q 012409 309 FICRRNLLLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDRS 388 (464)
Q Consensus 309 f~gR~~~~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~~ 388 (464)
++-|.+.--.+..+. ..+.+.+.+..... +.++++.+|.+. |-|+.+++++.++. .+.++...+...
T Consensus 8 iv~~~~~r~~~~~~~-~~~~l~~~l~~~~~---~~~~~i~~~~vm------~nHvHllv~~~~~~---~is~~~~~lK~~ 74 (121)
T PF01797_consen 8 IVFRTKYRRPLFNDE-IREALLEILREICE---EYGIEIIAFVVM------PNHVHLLVSIPPKQ---SISKFMQRLKGR 74 (121)
T ss_dssp EEEEBGGGTSSSSHH-HHHHHHHHHHHHHH---HTTEEEEEEEEE------TTEEEEEEEE-TTS----HHHHHHHHHHH
T ss_pred EEEeeeCCEeeeehh-eeeeeeeccccccc---cccceeeeeccc------Ccccceeeeecccc---cchheeeccccc
Confidence 334443333333344 44555555554433 679999999774 44999999975432 244444444442
Q ss_pred c---cCcchHhhhhc----Ccc--CCeEEEEeccchHHHHHHH
Q 012409 389 F---VDAGYVSARKV----NAI--GPLELRVVLKGTFQQILDH 422 (464)
Q Consensus 389 l---~n~~Y~~~R~~----g~l--~pl~v~~v~~GtF~~~~~~ 422 (464)
. .|..|...... |.+ +.--.+.+....+....++
T Consensus 75 ~s~~~~k~~~~~~~~~~~~~~~Wq~~y~~~~i~~~~~~~~~~Y 117 (121)
T PF01797_consen 75 SSRWINKEFPELKKRYFWRGHFWQRGYFDRSIRNESLDNVIRY 117 (121)
T ss_dssp HHHHHHHHTHHHHHSCCT-TSSBESEEEEEEEBSSBHHHHHHH
T ss_pred ccccccccccceecccccccccccCCeEEEEECChhHHHHHHH
Confidence 0 24333332211 222 2344566666666666554
No 147
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=32.32 E-value=31 Score=29.23 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=27.9
Q ss_pred eeeeeeCCEEEEeccc---CCCcEEEEEeecCceeeeee
Q 012409 286 LYRYRLGDVVKVMGFH---NSTPELKFICRRNLLLTINI 321 (464)
Q Consensus 286 LyRYr~GDvV~v~gf~---~~~P~i~f~gR~~~~l~v~G 321 (464)
|--|+.||.|-+.+-- .+.|.=.|.||++.+.|+.|
T Consensus 32 l~~y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~ 70 (98)
T PRK04306 32 LQEFEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRG 70 (98)
T ss_pred HHhccCCCEEEEEecCceecCCccccccCCCEEEEeecC
Confidence 4459999999987542 35677789999999888876
No 148
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme. The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe bindi
Probab=31.69 E-value=2.5e+02 Score=21.91 Aligned_cols=54 Identities=20% Similarity=0.311 Sum_probs=32.1
Q ss_pred HHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEEecCCCChHHHHHHHHHHHh
Q 012409 333 VDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWEVSGEVNDEVLKECCNCLDR 387 (464)
Q Consensus 333 v~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E~~~~~~~~~l~~~~~~ld~ 387 (464)
+.++...+++.|+.+..-.+... ......|+++++.+...+.+.++...+.|++
T Consensus 15 L~~il~~f~~~~ini~~i~s~p~-~~~~~~~~f~vd~~~~~~~~~~~~~l~~l~~ 68 (80)
T cd04905 15 LYDVLGVFAERGINLTKIESRPS-KGGLWEYVFFIDFEGHIEDPNVAEALEELKR 68 (80)
T ss_pred HHHHHHHHHHCCcCEEEEEEEEc-CCCCceEEEEEEEECCCCCHHHHHHHHHHHH
Confidence 33333455567888876554443 2345679999998764334445555555554
No 149
>CHL00123 rps6 ribosomal protein S6; Validated
Probab=31.58 E-value=2.5e+02 Score=23.42 Aligned_cols=46 Identities=13% Similarity=0.155 Sum_probs=31.8
Q ss_pred eeecCHHHHHHHHHHHHHHhhhcCceEEeEEE-------eecCCCCCceEEEE
Q 012409 321 IDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTS-------HVDLSTDPGHYVIF 366 (464)
Q Consensus 321 GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~-------~~~~~~~p~hY~~~ 366 (464)
--.++++++.+++.+....+.+.|.++....- +.=.....|||+++
T Consensus 15 ~p~l~e~~~~~~~~~~~~~i~~~gg~i~~~~~wG~r~LAY~I~k~~~G~Yv~~ 67 (97)
T CHL00123 15 KPDLNEEELLKWIENYKKLLRKRGAKNISVQNRGKRKLSYKINKYEDGIYIQM 67 (97)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEeecCeeeeEEcCCCCEEEEEEE
Confidence 34568999999999998888888888765431 21122355888654
No 150
>PRK10622 pheA bifunctional chorismate mutase/prephenate dehydratase; Provisional
Probab=31.46 E-value=3.6e+02 Score=28.46 Aligned_cols=85 Identities=8% Similarity=0.148 Sum_probs=47.9
Q ss_pred ecccCCCcEEEEEeecCc---------eeeeeeeecCHHHHHHHHHHHHHHhhhcCceEEeEEEeecCCCCCceEEEEEE
Q 012409 298 MGFHNSTPELKFICRRNL---------LLTINIDKNTEKDLQLSVDEAAQLLAEEKQEVVDFTSHVDLSTDPGHYVIFWE 368 (464)
Q Consensus 298 ~gf~~~~P~i~f~gR~~~---------~l~v~GEkv~e~~v~~av~~a~~~l~~~~~~l~~f~~~~~~~~~p~hY~~~~E 368 (464)
....++.-||-+++|... ..-+..-+-.+-.+.+++.. ++..|+.++-.-+.+ ....++.|.+|+|
T Consensus 271 ~D~~~N~TRF~vi~~~~~~~~~~~~~ktsl~~~~~~~pGaL~~~L~~----Fa~~giNLtkIeSRP-~~~~~~~Y~Ffid 345 (386)
T PRK10622 271 ANQQQNITRFIVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLV----LRNHNLIMTKLESRP-IHGNPWEEMFYLD 345 (386)
T ss_pred cCCccccceEEEEecCCCCCCCCCCCcEEEEEEcCCCCcHHHHHHHH----HHHcCCCeeEEEeee-cCCCCceEEEEEE
Confidence 334456677777777431 11112222234444455543 445788887655543 4557899999999
Q ss_pred ecCCCChHHHHHHHHHHHh
Q 012409 369 VSGEVNDEVLKECCNCLDR 387 (464)
Q Consensus 369 ~~~~~~~~~l~~~~~~ld~ 387 (464)
+.+...+...+.....|++
T Consensus 346 ~eg~~~d~~~~~aL~~l~~ 364 (386)
T PRK10622 346 VQANLRSAEMQKALKELGE 364 (386)
T ss_pred EeCCCCCHHHHHHHHHHHH
Confidence 9875444334444444544
No 151
>COG2026 RelE Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]
Probab=29.59 E-value=81 Score=25.96 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=19.9
Q ss_pred EEEEecccCceeeeeeCCEEEEecccCCCcE
Q 012409 276 YEIIVTNVAGLYRYRLGDVVKVMGFHNSTPE 306 (464)
Q Consensus 276 YelVvTt~~GLyRYr~GDvV~v~gf~~~~P~ 306 (464)
+-....-..|+||+|+||-.-+--+......
T Consensus 43 ~k~~~~~~~~~~R~RiG~YRlIy~i~d~~~~ 73 (90)
T COG2026 43 GKKLRKGLSGKYRLRIGDYRLIYEIDDETLT 73 (90)
T ss_pred ceecccCCCCeEEEEecCEEEEEEEECCceE
Confidence 3444455688999999995555555444443
No 152
>cd03483 MutL_Trans_MLH1 MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1). This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. MLH1 forms heterodimers with PMS2, PMS1 and MLH3. These three complexes have distinct functions in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Roles for hMLH1-hPMS1 or hMLH1-hMLH3 in MMR have not been established. Cells lacking hMLH1 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hMLH1 causes predisposition to HNPCC, Muir-Torre syndrome and Turcot syndrome (HNPCC variant). Mutation in hMLH1 accounts for a large fraction of HNPCC families.
Probab=29.23 E-value=1.1e+02 Score=26.64 Aligned_cols=44 Identities=16% Similarity=0.095 Sum_probs=35.8
Q ss_pred CEEEEecccCCCcEEEEEeecCceeeeeeeecCHHHHHHHHHHHHH
Q 012409 293 DVVKVMGFHNSTPELKFICRRNLLLTINIDKNTEKDLQLSVDEAAQ 338 (464)
Q Consensus 293 DvV~v~gf~~~~P~i~f~gR~~~~l~v~GEkv~e~~v~~av~~a~~ 338 (464)
+-+++.||.. .|.+. .+|..+++-++|--+....+..||.++-.
T Consensus 30 ~~~~i~G~is-~p~~~-~~~~~q~~fVNgR~V~~~~l~~aI~~~Y~ 73 (127)
T cd03483 30 LGFKVKGLIS-NANYS-KKKIIFILFINNRLVECSALRRAIENVYA 73 (127)
T ss_pred CcEEEEEEEc-Cchhc-CCCceEEEEEcCCEecCHHHHHHHHHHHH
Confidence 5688999964 46666 67778889999999999999999998855
No 153
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=27.57 E-value=53 Score=24.60 Aligned_cols=19 Identities=26% Similarity=0.723 Sum_probs=14.6
Q ss_pred eeeCCEEEEecccCCCcEEEEE
Q 012409 289 YRLGDVVKVMGFHNSTPELKFI 310 (464)
Q Consensus 289 Yr~GDvV~v~gf~~~~P~i~f~ 310 (464)
|.+||+|+.. .+.|.+.+.
T Consensus 1 f~~GDvV~LK---SGGp~MTV~ 19 (53)
T PF09926_consen 1 FKIGDVVQLK---SGGPRMTVT 19 (53)
T ss_pred CCCCCEEEEc---cCCCCeEEE
Confidence 6799999998 567876554
No 154
>COG5475 Uncharacterized small protein [Function unknown]
Probab=20.33 E-value=1.2e+02 Score=23.03 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=19.7
Q ss_pred eeeCCEEEEecccCCCcEEEEEeecCc
Q 012409 289 YRLGDVVKVMGFHNSTPELKFICRRNL 315 (464)
Q Consensus 289 Yr~GDvV~v~gf~~~~P~i~f~gR~~~ 315 (464)
|.+||+|++. .+.|++.+.+-..+
T Consensus 5 FstgdvV~lK---sGGP~Mtvs~~ss~ 28 (60)
T COG5475 5 FSTGDVVTLK---SGGPRMTVSGYSSD 28 (60)
T ss_pred eecCcEEEee---cCCceEEEeccccC
Confidence 6799999998 67899988877664
Done!