Query 012411
Match_columns 464
No_of_seqs 451 out of 4162
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 02:21:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012411.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012411hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 6.6E-81 1.4E-85 638.4 45.6 431 14-445 9-442 (517)
2 PRK04750 ubiB putative ubiquin 100.0 6E-80 1.3E-84 636.0 46.9 421 25-445 2-441 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 9.3E-77 2E-81 606.7 47.9 418 27-445 1-434 (437)
4 KOG1235 Predicted unusual prot 100.0 7.5E-63 1.6E-67 502.6 34.1 293 57-352 90-389 (538)
5 KOG1236 Predicted unusual prot 100.0 2.1E-47 4.5E-52 367.0 26.5 375 60-434 120-555 (565)
6 KOG0595 Serine/threonine-prote 100.0 1.8E-32 3.8E-37 263.3 11.4 198 133-387 15-225 (429)
7 KOG1234 ABC (ATP binding casse 100.0 9.8E-32 2.1E-36 246.1 15.6 328 87-420 8-344 (363)
8 KOG0581 Mitogen-activated prot 100.0 8.7E-33 1.9E-37 263.2 8.3 252 134-441 85-345 (364)
9 KOG0593 Predicted protein kina 100.0 3.3E-31 7.1E-36 245.2 15.6 189 134-370 8-198 (396)
10 KOG0592 3-phosphoinositide-dep 100.0 6.8E-32 1.5E-36 266.9 8.3 252 134-435 79-342 (604)
11 KOG0615 Serine/threonine prote 100.0 4.1E-32 8.9E-37 260.5 3.8 252 133-435 177-441 (475)
12 KOG0575 Polo-like serine/threo 100.0 7.5E-31 1.6E-35 263.5 9.8 237 134-434 24-272 (592)
13 KOG0598 Ribosomal protein S6 k 100.0 1.3E-30 2.8E-35 248.3 9.6 228 134-412 31-262 (357)
14 KOG0694 Serine/threonine prote 100.0 3E-30 6.4E-35 262.0 10.8 261 134-451 374-649 (694)
15 KOG0600 Cdc2-related protein k 100.0 2E-30 4.2E-35 254.7 9.0 219 120-392 111-336 (560)
16 KOG0616 cAMP-dependent protein 100.0 4.2E-30 9.2E-35 237.3 9.9 231 134-418 50-283 (355)
17 KOG0597 Serine-threonine prote 100.0 5.7E-30 1.2E-34 253.6 10.1 248 134-439 8-259 (808)
18 KOG0591 NIMA (never in mitosis 100.0 1.9E-28 4E-33 224.9 13.3 238 134-426 25-273 (375)
19 KOG0661 MAPK related serine/th 100.0 3.8E-28 8.2E-33 237.1 15.6 215 125-392 9-226 (538)
20 KOG0583 Serine/threonine prote 100.0 6.4E-29 1.4E-33 248.6 9.3 249 133-436 22-280 (370)
21 KOG0588 Serine/threonine prote 100.0 1.2E-28 2.5E-33 248.8 9.6 241 134-438 18-270 (786)
22 KOG0605 NDR and related serine 100.0 2.2E-27 4.7E-32 235.2 17.8 211 134-389 147-401 (550)
23 KOG0660 Mitogen-activated prot 100.0 4.8E-28 1E-32 230.0 11.7 196 133-370 27-224 (359)
24 KOG0659 Cdk activating kinase 99.9 3.8E-27 8.2E-32 214.8 14.8 189 134-370 8-198 (318)
25 KOG0658 Glycogen synthase kina 99.9 5.2E-29 1.1E-33 236.9 2.1 188 133-370 29-222 (364)
26 KOG0578 p21-activated serine/t 99.9 4.9E-27 1.1E-31 234.3 15.3 260 110-434 256-526 (550)
27 KOG0611 Predicted serine/threo 99.9 1.5E-27 3.3E-32 228.1 10.8 228 134-412 59-288 (668)
28 KOG0663 Protein kinase PITSLRE 99.9 7.4E-28 1.6E-32 225.7 5.6 194 128-369 78-273 (419)
29 KOG0594 Protein kinase PCTAIRE 99.9 5.2E-27 1.1E-31 223.4 9.9 189 127-369 12-216 (323)
30 cd05612 STKc_PRKX_like Catalyt 99.9 8.6E-26 1.9E-30 220.6 16.6 234 134-426 7-241 (291)
31 PF03109 ABC1: ABC1 family; I 99.9 1.7E-26 3.7E-31 193.7 9.3 119 118-237 1-119 (119)
32 KOG0198 MEKK and related serin 99.9 3.1E-27 6.7E-32 228.2 5.2 245 134-435 23-280 (313)
33 cd05589 STKc_PKN Catalytic dom 99.9 2.3E-26 5E-31 228.1 11.3 238 134-426 5-244 (324)
34 KOG0201 Serine/threonine prote 99.9 5.2E-27 1.1E-31 227.3 5.8 252 122-436 9-268 (467)
35 cd05590 STKc_nPKC_eta Catalyti 99.9 3.8E-26 8.3E-31 226.2 11.3 237 135-428 2-241 (320)
36 PTZ00263 protein kinase A cata 99.9 4.5E-26 9.7E-31 226.6 11.8 235 134-427 24-259 (329)
37 KOG0589 Serine/threonine prote 99.9 5E-26 1.1E-30 225.5 11.4 239 134-429 10-253 (426)
38 cd05571 STKc_PKB Catalytic dom 99.9 2.1E-26 4.5E-31 228.4 8.3 234 135-426 2-238 (323)
39 KOG0585 Ca2+/calmodulin-depend 99.9 4E-26 8.6E-31 222.7 9.7 260 134-436 103-377 (576)
40 KOG0580 Serine/threonine prote 99.9 6.5E-26 1.4E-30 204.0 10.0 246 130-435 23-277 (281)
41 cd05628 STKc_NDR1 Catalytic do 99.9 3.1E-26 6.7E-31 230.9 8.9 210 134-388 7-248 (363)
42 KOG4250 TANK binding protein k 99.9 4.6E-26 1E-30 232.2 9.7 197 129-373 14-223 (732)
43 KOG0577 Serine/threonine prote 99.9 6.1E-26 1.3E-30 225.9 10.0 252 121-434 21-281 (948)
44 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 8.9E-26 1.9E-30 224.8 10.8 203 134-388 7-210 (333)
45 cd05575 STKc_SGK Catalytic dom 99.9 9E-26 2E-30 223.8 10.7 234 134-427 1-240 (323)
46 cd05602 STKc_SGK1 Catalytic do 99.9 1.3E-25 2.8E-30 222.9 11.5 227 134-410 1-230 (325)
47 cd05593 STKc_PKB_gamma Catalyt 99.9 9.7E-26 2.1E-30 224.1 10.3 236 135-426 2-238 (328)
48 KOG0574 STE20-like serine/thre 99.9 2.6E-26 5.7E-31 212.3 5.3 208 111-380 18-233 (502)
49 cd05592 STKc_nPKC_theta_delta 99.9 8.2E-25 1.8E-29 216.3 15.9 237 134-427 1-240 (316)
50 cd05616 STKc_cPKC_beta Catalyt 99.9 1.1E-24 2.3E-29 216.1 16.7 239 134-427 6-245 (323)
51 cd05591 STKc_nPKC_epsilon Cata 99.9 7E-25 1.5E-29 217.2 15.3 235 135-426 2-239 (321)
52 cd05603 STKc_SGK2 Catalytic do 99.9 1.7E-25 3.6E-30 221.7 10.8 235 135-427 2-240 (321)
53 cd05585 STKc_YPK1_like Catalyt 99.9 2.3E-25 5E-30 219.8 11.7 233 136-426 1-236 (312)
54 cd05595 STKc_PKB_beta Catalyti 99.9 9.8E-26 2.1E-30 223.6 8.7 234 135-426 2-238 (323)
55 cd05626 STKc_LATS2 Catalytic d 99.9 1.3E-25 2.8E-30 227.9 9.5 234 134-410 7-286 (381)
56 cd05604 STKc_SGK3 Catalytic do 99.9 2.7E-25 5.8E-30 220.6 10.7 226 134-410 1-230 (325)
57 KOG4721 Serine/threonine prote 99.9 8.4E-26 1.8E-30 224.1 6.7 240 89-410 103-347 (904)
58 KOG0192 Tyrosine kinase specif 99.9 5.5E-25 1.2E-29 218.6 11.8 225 134-409 47-281 (362)
59 cd05620 STKc_nPKC_delta Cataly 99.9 1.7E-24 3.7E-29 214.1 15.0 241 134-434 1-251 (316)
60 cd05615 STKc_cPKC_alpha Cataly 99.9 2.6E-24 5.7E-29 213.4 16.3 237 134-427 6-245 (323)
61 cd05573 STKc_ROCK_NDR_like Cat 99.9 5.1E-25 1.1E-29 220.6 10.9 234 134-410 7-268 (350)
62 cd05594 STKc_PKB_alpha Catalyt 99.9 2.1E-25 4.5E-30 221.4 7.6 234 134-426 1-239 (325)
63 cd05587 STKc_cPKC Catalytic do 99.9 1.9E-24 4.2E-29 214.3 14.5 236 134-426 6-244 (324)
64 KOG0667 Dual-specificity tyros 99.9 1E-24 2.2E-29 221.6 12.5 184 134-370 192-384 (586)
65 cd05621 STKc_ROCK2 Catalytic d 99.9 2E-25 4.4E-30 225.5 7.5 207 134-388 49-259 (370)
66 cd05631 STKc_GRK4 Catalytic do 99.9 5.2E-24 1.1E-28 207.3 16.5 237 134-427 6-249 (285)
67 PTZ00426 cAMP-dependent protei 99.9 8.9E-25 1.9E-29 218.3 11.2 233 134-426 36-271 (340)
68 cd05584 STKc_p70S6K Catalytic 99.9 1.2E-24 2.5E-29 215.8 11.8 238 134-426 2-243 (323)
69 cd07878 STKc_p38beta_MAPK11 Ca 99.9 9.4E-24 2E-28 211.0 17.7 201 134-381 21-221 (343)
70 cd05619 STKc_nPKC_theta Cataly 99.9 8.4E-25 1.8E-29 216.3 10.0 238 134-428 1-241 (316)
71 cd07848 STKc_CDKL5 Catalytic d 99.9 2.4E-24 5.1E-29 209.5 12.8 198 134-381 7-206 (287)
72 cd05599 STKc_NDR_like Catalyti 99.9 6.3E-25 1.4E-29 221.3 9.0 209 134-385 7-248 (364)
73 cd05622 STKc_ROCK1 Catalytic d 99.9 4.5E-25 9.7E-30 223.1 7.8 203 134-386 49-257 (371)
74 KOG0032 Ca2+/calmodulin-depend 99.9 4.1E-25 8.9E-30 221.3 7.1 253 124-436 33-298 (382)
75 cd05588 STKc_aPKC Catalytic do 99.9 6E-24 1.3E-28 211.3 15.3 236 135-427 2-249 (329)
76 KOG0033 Ca2+/calmodulin-depend 99.9 9.9E-26 2.1E-30 203.2 2.0 252 125-436 10-272 (355)
77 cd05597 STKc_DMPK_like Catalyt 99.9 1.1E-24 2.4E-29 216.8 9.6 207 134-385 7-217 (331)
78 cd07874 STKc_JNK3 Catalytic do 99.9 4.2E-24 9.1E-29 214.6 13.7 200 134-381 23-223 (355)
79 PLN00034 mitogen-activated pro 99.9 1E-24 2.2E-29 219.0 9.1 189 134-371 80-270 (353)
80 cd05596 STKc_ROCK Catalytic do 99.9 3.1E-25 6.8E-30 224.1 5.4 229 134-410 49-285 (370)
81 cd05608 STKc_GRK1 Catalytic do 99.9 1.7E-24 3.7E-29 210.2 9.8 235 136-426 1-244 (280)
82 KOG0582 Ste20-like serine/thre 99.9 2E-24 4.3E-29 209.7 9.5 255 134-436 32-298 (516)
83 cd05570 STKc_PKC Catalytic dom 99.9 1.4E-23 3.1E-28 207.6 15.7 234 135-428 2-241 (318)
84 cd05601 STKc_CRIK Catalytic do 99.9 8E-25 1.7E-29 217.6 6.5 245 134-434 7-266 (330)
85 KOG0197 Tyrosine kinases [Sign 99.9 5.3E-24 1.1E-28 212.0 12.1 225 134-410 212-440 (468)
86 cd05617 STKc_aPKC_zeta Catalyt 99.9 1.9E-23 4.2E-28 207.5 16.1 237 134-427 1-247 (327)
87 cd05627 STKc_NDR2 Catalytic do 99.9 6.5E-25 1.4E-29 221.0 5.4 210 134-388 7-248 (360)
88 KOG0612 Rho-associated, coiled 99.9 1.8E-24 3.9E-29 229.5 8.9 225 134-412 81-321 (1317)
89 PHA03212 serine/threonine kina 99.9 3.2E-24 6.9E-29 218.2 10.5 181 134-371 98-280 (391)
90 cd05096 PTKc_DDR1 Catalytic do 99.9 3E-23 6.5E-28 203.7 17.1 144 241-388 91-254 (304)
91 cd05618 STKc_aPKC_iota Catalyt 99.9 1.4E-23 2.9E-28 208.8 14.6 189 134-371 1-193 (329)
92 cd07876 STKc_JNK2 Catalytic do 99.9 8.1E-24 1.8E-28 212.9 12.5 199 134-380 27-226 (359)
93 cd05629 STKc_NDR_like_fungal C 99.9 3.7E-24 8.1E-29 216.8 10.1 207 134-385 7-257 (377)
94 cd05582 STKc_RSK_N N-terminal 99.9 1.8E-24 4E-29 213.9 7.6 236 134-427 2-242 (318)
95 KOG0690 Serine/threonine prote 99.9 9.9E-24 2.1E-28 197.2 11.9 225 134-410 174-402 (516)
96 cd07871 STKc_PCTAIRE3 Catalyti 99.9 1.6E-24 3.4E-29 211.3 6.7 205 134-389 11-217 (288)
97 cd06649 PKc_MEK2 Catalytic dom 99.9 3.4E-24 7.4E-29 213.3 9.1 191 134-380 11-206 (331)
98 cd05605 STKc_GRK4_like Catalyt 99.9 1.9E-23 4.2E-28 203.3 14.2 197 134-380 6-205 (285)
99 KOG4717 Serine/threonine prote 99.9 3.2E-24 6.9E-29 210.8 8.6 224 133-412 23-255 (864)
100 PTZ00283 serine/threonine prot 99.9 1E-23 2.2E-28 220.6 12.3 254 134-434 38-300 (496)
101 cd05625 STKc_LATS1 Catalytic d 99.9 4.4E-24 9.5E-29 216.7 9.0 203 134-381 7-253 (382)
102 cd07853 STKc_NLK Catalytic dom 99.9 6.3E-24 1.4E-28 214.8 10.0 210 134-388 6-217 (372)
103 cd05614 STKc_MSK2_N N-terminal 99.9 3.9E-23 8.5E-28 205.6 15.5 239 134-426 6-254 (332)
104 cd05623 STKc_MRCK_alpha Cataly 99.9 1.2E-23 2.7E-28 209.3 11.8 210 134-386 7-218 (332)
105 KOG0696 Serine/threonine prote 99.9 3.1E-24 6.7E-29 206.0 6.6 229 134-412 355-586 (683)
106 cd07859 STKc_TDY_MAPK_plant Ca 99.9 8.9E-24 1.9E-28 210.3 10.2 204 134-380 6-212 (338)
107 KOG1989 ARK protein kinase fam 99.9 1.7E-23 3.7E-28 218.9 12.7 204 133-379 42-261 (738)
108 cd05598 STKc_LATS Catalytic do 99.9 1.6E-23 3.4E-28 212.2 12.0 207 134-383 7-251 (376)
109 cd07875 STKc_JNK1 Catalytic do 99.9 2.6E-23 5.6E-28 209.7 13.4 203 134-383 30-232 (364)
110 KOG4236 Serine/threonine prote 99.9 1.1E-23 2.4E-28 207.5 10.3 233 123-414 559-806 (888)
111 cd06642 STKc_STK25-YSK1 Cataly 99.9 7.2E-23 1.6E-27 198.1 15.0 252 125-436 3-258 (277)
112 cd07862 STKc_CDK6 Catalytic do 99.9 8.7E-24 1.9E-28 205.8 8.3 137 242-388 82-221 (290)
113 cd05586 STKc_Sck1_like Catalyt 99.9 5.8E-24 1.3E-28 211.4 7.2 236 136-426 1-241 (330)
114 cd05102 PTKc_VEGFR3 Catalytic 99.9 1.1E-22 2.3E-27 202.9 16.3 93 273-369 179-271 (338)
115 PTZ00267 NIMA-related protein 99.9 1.6E-23 3.6E-28 218.5 10.8 240 133-429 72-318 (478)
116 cd05624 STKc_MRCK_beta Catalyt 99.9 7.8E-24 1.7E-28 210.7 7.7 204 134-385 7-217 (331)
117 PTZ00284 protein kinase; Provi 99.9 1E-22 2.2E-27 212.2 15.9 205 134-388 135-357 (467)
118 PTZ00036 glycogen synthase kin 99.9 7.9E-23 1.7E-27 211.1 14.8 194 134-380 72-275 (440)
119 cd05607 STKc_GRK7 Catalytic do 99.9 3E-23 6.4E-28 201.1 10.5 188 136-371 1-191 (277)
120 cd07863 STKc_CDK4 Catalytic do 99.9 6E-23 1.3E-27 199.6 12.6 190 134-370 6-203 (288)
121 KOG0599 Phosphorylase kinase g 99.9 1.2E-23 2.5E-28 192.5 6.9 268 127-440 15-292 (411)
122 KOG1187 Serine/threonine prote 99.9 9.7E-24 2.1E-28 210.8 6.9 183 134-370 81-274 (361)
123 cd05084 PTKc_Fes Catalytic dom 99.9 2.4E-23 5.3E-28 198.4 8.6 189 134-369 1-191 (252)
124 cd06650 PKc_MEK1 Catalytic dom 99.9 3.4E-23 7.3E-28 206.3 9.7 187 134-371 11-199 (333)
125 cd05630 STKc_GRK6 Catalytic do 99.9 9.7E-23 2.1E-27 198.4 12.5 237 134-427 6-249 (285)
126 KOG0610 Putative serine/threon 99.9 6.7E-23 1.5E-27 197.6 11.0 242 134-427 83-381 (459)
127 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 1.4E-22 3.1E-27 196.9 13.5 248 134-436 7-267 (286)
128 cd05606 STKc_beta_ARK Catalyti 99.9 4.5E-23 9.8E-28 200.0 9.3 195 135-378 1-198 (278)
129 cd05578 STKc_Yank1 Catalytic d 99.9 4E-22 8.8E-27 190.6 15.5 195 134-379 6-202 (258)
130 cd06658 STKc_PAK5 Catalytic do 99.9 3.8E-22 8.3E-27 195.0 15.2 194 126-371 22-215 (292)
131 KOG0608 Warts/lats-like serine 99.9 1.3E-22 2.8E-27 203.6 11.7 200 126-370 629-867 (1034)
132 cd05581 STKc_PDK1 Catalytic do 99.9 1.5E-22 3.3E-27 195.5 11.9 234 134-410 7-256 (280)
133 KOG0586 Serine/threonine prote 99.9 1.8E-23 3.9E-28 210.6 5.4 229 134-413 62-292 (596)
134 cd05147 RIO1_euk RIO kinase fa 99.9 7.3E-22 1.6E-26 180.4 15.6 163 134-320 3-169 (190)
135 cd05145 RIO1_like RIO kinase f 99.9 7.8E-22 1.7E-26 180.5 15.6 180 134-343 3-185 (190)
136 cd06605 PKc_MAPKK Catalytic do 99.9 8.2E-22 1.8E-26 189.0 16.5 187 134-371 7-196 (265)
137 cd07872 STKc_PCTAIRE2 Catalyti 99.9 5.4E-23 1.2E-27 202.4 8.3 206 134-390 12-219 (309)
138 cd06657 STKc_PAK4 Catalytic do 99.9 3.1E-22 6.7E-27 195.6 13.0 192 134-379 26-219 (292)
139 cd05580 STKc_PKA Catalytic dom 99.9 2.4E-22 5.3E-27 195.9 12.1 231 134-426 7-241 (290)
140 KOG4645 MAPKKK (MAP kinase kin 99.9 5.3E-24 1.1E-28 228.6 0.0 226 134-410 1241-1473(1509)
141 cd05632 STKc_GRK5 Catalytic do 99.9 1.1E-21 2.3E-26 191.0 16.2 237 134-427 6-249 (285)
142 cd07869 STKc_PFTAIRE1 Catalyti 99.9 2.6E-22 5.7E-27 197.0 11.8 194 134-378 11-206 (303)
143 cd00192 PTKc Catalytic domain 99.9 4.5E-22 9.8E-27 189.7 13.0 207 134-388 1-220 (262)
144 cd05104 PTKc_Kit Catalytic dom 99.9 2.5E-22 5.3E-27 203.4 11.6 93 273-369 219-311 (375)
145 cd05611 STKc_Rim15_like Cataly 99.9 7E-22 1.5E-26 189.2 14.1 199 134-386 2-203 (260)
146 cd05064 PTKc_EphR_A10 Catalyti 99.9 1.5E-22 3.2E-27 194.9 9.2 202 134-386 11-219 (266)
147 KOG0579 Ste20-like serine/thre 99.9 2.2E-22 4.7E-27 201.9 10.5 259 135-451 39-306 (1187)
148 KOG4279 Serine/threonine prote 99.9 5.9E-23 1.3E-27 207.9 6.4 240 133-435 580-831 (1226)
149 cd06659 STKc_PAK6 Catalytic do 99.9 1.4E-21 3E-26 191.5 15.9 185 134-370 27-213 (297)
150 cd08529 STKc_FA2-like Catalyti 99.9 1E-21 2.2E-26 187.2 14.6 197 134-380 6-205 (256)
151 cd05633 STKc_GRK3 Catalytic do 99.9 1.1E-22 2.3E-27 197.5 7.7 191 135-371 1-193 (279)
152 cd05052 PTKc_Abl Catalytic dom 99.9 2.5E-22 5.4E-27 192.8 10.0 200 134-384 12-214 (263)
153 cd05106 PTKc_CSF-1R Catalytic 99.9 1.7E-22 3.6E-27 204.5 9.1 94 272-369 216-309 (374)
154 cd06628 STKc_MAPKKK_Byr2_like 99.9 2.3E-22 5.1E-27 193.1 9.4 208 134-378 6-214 (267)
155 KOG0664 Nemo-like MAPK-related 99.9 2.5E-22 5.4E-27 183.8 9.0 195 133-369 58-253 (449)
156 PHA02988 hypothetical protein; 99.9 7.9E-22 1.7E-26 191.9 13.1 202 133-388 25-234 (283)
157 cd06625 STKc_MEKK3_like Cataly 99.9 2.1E-22 4.5E-27 192.9 8.9 201 133-379 7-210 (263)
158 cd06611 STKc_SLK_like Catalyti 99.9 5E-22 1.1E-26 192.4 11.6 198 134-380 11-212 (280)
159 cd07868 STKc_CDK8 Catalytic do 99.9 5.5E-22 1.2E-26 195.8 12.1 188 133-370 6-212 (317)
160 PHA03209 serine/threonine kina 99.9 3.7E-22 8E-27 200.8 11.1 177 134-369 72-251 (357)
161 cd06635 STKc_TAO1 Catalytic do 99.9 2E-21 4.3E-26 192.2 16.0 213 115-380 14-228 (317)
162 cd06629 STKc_MAPKKK_Bck1_like 99.9 6.6E-22 1.4E-26 190.7 12.3 205 128-370 1-208 (272)
163 cd07850 STKc_JNK Catalytic dom 99.9 1.3E-21 2.7E-26 196.5 14.8 199 134-380 22-221 (353)
164 cd05579 STKc_MAST_like Catalyt 99.9 1.2E-21 2.6E-26 187.2 13.8 204 136-383 1-208 (265)
165 PRK13184 pknD serine/threonine 99.9 1.7E-22 3.6E-27 219.0 8.7 244 134-427 8-278 (932)
166 cd06631 STKc_YSK4 Catalytic do 99.9 4E-22 8.7E-27 191.4 10.1 203 134-378 6-210 (265)
167 cd06637 STKc_TNIK Catalytic do 99.9 2.2E-22 4.9E-27 193.8 8.4 202 124-370 4-212 (272)
168 PHA03207 serine/threonine kina 99.9 2.4E-22 5.2E-27 204.7 8.9 260 134-455 98-374 (392)
169 cd06615 PKc_MEK Catalytic doma 99.9 4.1E-22 8.8E-27 196.2 10.0 187 134-371 7-195 (308)
170 cd05085 PTKc_Fer Catalytic dom 99.9 2.7E-21 5.9E-26 183.8 15.4 187 134-369 1-189 (250)
171 cd05095 PTKc_DDR2 Catalytic do 99.9 5.7E-22 1.2E-26 193.9 10.9 143 241-387 91-245 (296)
172 cd05097 PTKc_DDR_like Catalyti 99.9 3.5E-22 7.6E-27 195.3 9.3 144 241-388 89-245 (295)
173 cd06632 STKc_MEKK1_plant Catal 99.9 8.9E-22 1.9E-26 187.7 11.9 198 133-379 5-205 (258)
174 cd06655 STKc_PAK2 Catalytic do 99.9 1E-21 2.3E-26 192.2 12.6 195 134-380 25-219 (296)
175 cd06640 STKc_MST4 Catalytic do 99.9 3.2E-21 7E-26 186.6 15.8 201 125-380 3-205 (277)
176 cd05609 STKc_MAST Catalytic do 99.9 7E-22 1.5E-26 194.1 11.2 241 134-427 7-263 (305)
177 cd06641 STKc_MST3 Catalytic do 99.9 5.1E-21 1.1E-25 185.2 17.0 252 124-435 2-257 (277)
178 cd05040 PTKc_Ack_like Catalyti 99.9 2.5E-21 5.4E-26 184.9 14.2 207 134-388 1-213 (257)
179 KOG0596 Dual specificity; seri 99.9 1.3E-21 2.8E-26 194.4 12.5 241 134-434 367-630 (677)
180 cd05059 PTKc_Tec_like Catalyti 99.9 1.5E-21 3.3E-26 186.6 12.5 198 134-383 10-209 (256)
181 cd06654 STKc_PAK1 Catalytic do 99.9 1E-21 2.3E-26 192.2 11.3 188 134-371 26-213 (296)
182 cd05116 PTKc_Syk Catalytic dom 99.9 5.9E-22 1.3E-26 189.6 9.3 142 242-387 68-210 (257)
183 cd05574 STKc_phototropin_like 99.9 1E-21 2.2E-26 193.9 11.2 204 134-380 7-236 (316)
184 PF00069 Pkinase: Protein kina 99.9 1.4E-22 3E-27 193.5 4.8 193 134-379 5-202 (260)
185 cd05577 STKc_GRK Catalytic dom 99.9 7.4E-22 1.6E-26 191.1 10.0 187 136-370 1-190 (277)
186 cd05051 PTKc_DDR Catalytic dom 99.9 9.7E-22 2.1E-26 191.9 10.8 144 241-388 91-246 (296)
187 KOG0193 Serine/threonine prote 99.9 2.3E-22 5.1E-27 201.8 6.5 206 133-390 397-607 (678)
188 KOG0194 Protein tyrosine kinas 99.9 7.9E-22 1.7E-26 199.2 10.4 240 133-428 162-410 (474)
189 KOG0604 MAP kinase-activated p 99.9 1.3E-22 2.8E-27 188.0 4.3 189 131-371 65-260 (400)
190 cd05572 STKc_cGK_PKG Catalytic 99.9 1.9E-21 4.2E-26 186.3 12.6 187 136-370 1-188 (262)
191 cd05048 PTKc_Ror Catalytic Dom 99.9 5.5E-22 1.2E-26 192.3 8.8 205 134-386 11-237 (283)
192 cd08223 STKc_Nek4 Catalytic do 99.9 9.7E-22 2.1E-26 187.6 10.4 198 134-380 6-206 (257)
193 PHA03211 serine/threonine kina 99.9 2.6E-22 5.6E-27 207.4 6.7 181 134-369 175-357 (461)
194 cd05088 PTKc_Tie2 Catalytic do 99.9 1.2E-20 2.6E-25 185.3 18.3 200 134-383 13-231 (303)
195 KOG1035 eIF-2alpha kinase GCN2 99.9 8.4E-23 1.8E-27 218.5 3.1 125 244-370 671-814 (1351)
196 cd06643 STKc_SLK Catalytic dom 99.9 9.3E-22 2E-26 190.8 10.2 198 134-380 11-212 (282)
197 cd06644 STKc_STK10_LOK Catalyt 99.9 7.1E-22 1.5E-26 192.7 9.4 205 125-380 11-219 (292)
198 cd06917 STKc_NAK1_like Catalyt 99.9 7.6E-21 1.6E-25 183.7 16.2 199 134-380 7-206 (277)
199 cd05123 STKc_AGC Catalytic dom 99.9 4.3E-21 9.3E-26 182.2 14.2 224 136-410 1-227 (250)
200 cd05034 PTKc_Src_like Catalyti 99.9 1.6E-21 3.5E-26 186.7 11.2 199 134-386 12-215 (261)
201 KOG1095 Protein tyrosine kinas 99.9 2.6E-21 5.7E-26 208.6 13.9 204 134-386 698-915 (1025)
202 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 7.6E-22 1.7E-26 189.0 8.8 200 134-386 12-214 (260)
203 cd05068 PTKc_Frk_like Catalyti 99.9 4.2E-22 9.1E-27 190.9 7.0 198 134-383 12-212 (261)
204 cd06619 PKc_MKK5 Catalytic dom 99.9 4.3E-21 9.3E-26 186.0 14.2 183 134-370 7-189 (279)
205 cd05049 PTKc_Trk Catalytic dom 99.9 1.1E-21 2.3E-26 189.9 9.9 204 134-385 11-234 (280)
206 cd05113 PTKc_Btk_Bmx Catalytic 99.9 3E-21 6.4E-26 184.8 12.7 183 134-369 10-196 (256)
207 cd07841 STKc_CDK7 Catalytic do 99.9 4.8E-22 1E-26 194.3 7.3 190 134-370 6-199 (298)
208 cd07873 STKc_PCTAIRE1 Catalyti 99.9 9.4E-22 2E-26 192.8 9.3 202 134-386 12-215 (301)
209 cd05047 PTKc_Tie Catalytic dom 99.9 1.9E-21 4E-26 187.6 11.2 199 134-382 1-218 (270)
210 cd06630 STKc_MEKK1 Catalytic d 99.9 2.7E-21 5.8E-26 185.8 12.2 193 134-370 6-204 (268)
211 PLN03225 Serine/threonine-prot 99.9 3.5E-21 7.5E-26 203.8 14.2 192 133-370 137-375 (566)
212 cd07880 STKc_p38gamma_MAPK12 C 99.9 5.6E-21 1.2E-25 191.1 14.8 201 133-380 20-220 (343)
213 cd05075 PTKc_Axl Catalytic dom 99.9 2.9E-21 6.2E-26 186.1 12.2 123 243-369 80-209 (272)
214 PTZ00266 NIMA-related protein 99.9 1.1E-21 2.4E-26 213.5 10.3 238 134-429 19-290 (1021)
215 cd05035 PTKc_Axl_like Catalyti 99.9 2.1E-21 4.6E-26 186.8 11.2 122 244-369 82-210 (273)
216 cd06609 STKc_MST3_like Catalyt 99.9 7.1E-21 1.5E-25 183.7 14.9 196 134-380 7-202 (274)
217 cd08219 STKc_Nek3 Catalytic do 99.9 9.8E-22 2.1E-26 187.6 8.7 200 134-384 6-208 (255)
218 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.8E-21 8.1E-26 183.6 12.7 119 242-370 73-202 (259)
219 cd05108 PTKc_EGFR Catalytic do 99.9 1.9E-21 4E-26 192.2 10.9 200 134-383 13-219 (316)
220 cd05033 PTKc_EphR Catalytic do 99.9 3.2E-21 6.8E-26 185.4 12.2 203 133-385 9-218 (266)
221 cd05091 PTKc_Ror2 Catalytic do 99.9 1.7E-21 3.6E-26 189.1 10.2 141 242-387 81-238 (283)
222 cd07846 STKc_CDKL2_3 Catalytic 99.9 4.1E-21 8.8E-26 186.4 12.8 189 134-370 7-197 (286)
223 cd05069 PTKc_Yes Catalytic dom 99.9 1E-21 2.2E-26 188.2 8.5 194 134-380 12-208 (260)
224 cd06656 STKc_PAK3 Catalytic do 99.9 1.5E-21 3.2E-26 191.3 9.6 192 126-371 19-212 (297)
225 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.4E-21 2.9E-26 187.3 9.1 198 134-385 12-213 (260)
226 cd07833 STKc_CDKL Catalytic do 99.9 7.5E-22 1.6E-26 191.7 7.4 184 134-370 7-198 (288)
227 cd08227 PK_STRAD_alpha Pseudok 99.9 1E-21 2.2E-26 195.1 8.5 200 134-380 4-214 (327)
228 cd05071 PTKc_Src Catalytic dom 99.9 1.4E-21 3E-26 187.8 9.0 198 134-385 12-213 (262)
229 cd05114 PTKc_Tec_Rlk Catalytic 99.8 5.5E-21 1.2E-25 182.6 13.0 201 134-386 10-212 (256)
230 cd07839 STKc_CDK5 Catalytic do 99.8 2.9E-21 6.3E-26 187.4 11.3 184 134-370 6-196 (284)
231 cd06617 PKc_MKK3_6 Catalytic d 99.8 3.7E-21 7.9E-26 186.4 12.0 191 134-371 7-204 (283)
232 cd05039 PTKc_Csk_like Catalyti 99.8 3.2E-21 7E-26 184.1 11.3 195 134-385 12-209 (256)
233 cd05072 PTKc_Lyn Catalytic dom 99.8 1.1E-20 2.5E-25 180.9 15.0 195 134-380 12-209 (261)
234 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.8 1E-21 2.3E-26 190.6 7.9 126 243-371 82-207 (283)
235 cd05122 PKc_STE Catalytic doma 99.8 2.4E-21 5.1E-26 183.4 10.1 192 134-379 6-200 (253)
236 cd06623 PKc_MAPKK_plant_like C 99.8 3.2E-21 7E-26 184.5 11.0 187 134-370 7-196 (264)
237 cd06636 STKc_MAP4K4_6 Catalyti 99.8 2.6E-21 5.7E-26 187.6 10.5 200 134-378 22-228 (282)
238 cd06638 STKc_myosinIIIA Cataly 99.8 2.5E-21 5.5E-26 188.0 10.3 189 134-370 24-225 (286)
239 cd07851 STKc_p38 Catalytic dom 99.8 8.2E-21 1.8E-25 189.9 14.2 271 133-456 20-298 (343)
240 cd05103 PTKc_VEGFR2 Catalytic 99.8 6.1E-21 1.3E-25 190.9 13.3 93 273-369 184-276 (343)
241 KOG0668 Casein kinase II, alph 99.8 1.1E-21 2.3E-26 175.7 6.8 224 134-409 44-276 (338)
242 cd05089 PTKc_Tie1 Catalytic do 99.8 5.1E-21 1.1E-25 187.3 12.3 137 242-386 76-229 (297)
243 cd06645 STKc_MAP4K3 Catalytic 99.8 1.5E-21 3.3E-26 187.5 8.4 188 134-370 15-205 (267)
244 KOG0669 Cyclin T-dependent kin 99.8 3.3E-22 7.1E-27 181.2 3.4 215 134-394 23-247 (376)
245 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.8 1.2E-21 2.6E-26 190.2 7.5 188 134-370 10-207 (284)
246 cd05063 PTKc_EphR_A2 Catalytic 99.8 2.4E-21 5.3E-26 186.3 9.6 191 133-369 10-205 (268)
247 cd07877 STKc_p38alpha_MAPK14 C 99.8 1E-20 2.2E-25 189.4 14.3 193 134-371 23-215 (345)
248 cd07861 STKc_CDK1_euk Catalyti 99.8 1.2E-21 2.6E-26 190.0 7.4 195 134-378 6-204 (285)
249 cd06621 PKc_MAPKK_Pek1_like Ca 99.8 4.2E-21 9.1E-26 186.9 11.1 188 134-371 7-200 (287)
250 smart00219 TyrKc Tyrosine kina 99.8 4.3E-21 9.3E-26 182.8 10.9 201 134-385 5-214 (258)
251 cd08228 STKc_Nek6 Catalytic do 99.8 4.9E-21 1.1E-25 184.0 11.3 191 133-370 7-202 (267)
252 cd05148 PTKc_Srm_Brk Catalytic 99.8 4.6E-21 1E-25 183.5 11.0 200 134-385 12-214 (261)
253 KOG0196 Tyrosine kinase, EPH ( 99.8 3.7E-22 8.1E-27 204.9 3.5 257 100-408 603-868 (996)
254 cd05083 PTKc_Chk Catalytic dom 99.8 3E-21 6.6E-26 184.2 9.5 191 134-383 12-205 (254)
255 cd06648 STKc_PAK_II Catalytic 99.8 5.1E-21 1.1E-25 186.2 11.3 187 134-370 25-211 (285)
256 cd05101 PTKc_FGFR2 Catalytic d 99.8 4.2E-21 9.2E-26 188.4 10.8 139 242-385 94-249 (304)
257 cd05105 PTKc_PDGFR_alpha Catal 99.8 1.5E-20 3.2E-25 191.7 15.1 92 273-369 242-334 (400)
258 cd06608 STKc_myosinIII_like Ca 99.8 5.9E-21 1.3E-25 183.6 11.5 202 134-378 12-220 (275)
259 cd06620 PKc_MAPKK_Byr1_like Ca 99.8 6.4E-21 1.4E-25 185.2 11.8 186 134-370 11-198 (284)
260 cd08218 STKc_Nek1 Catalytic do 99.8 8.4E-21 1.8E-25 181.1 12.4 245 134-456 6-253 (256)
261 cd05079 PTKc_Jak1_rpt2 Catalyt 99.8 1.4E-20 3.1E-25 182.8 14.2 190 134-369 10-207 (284)
262 cd08229 STKc_Nek7 Catalytic do 99.8 7.3E-21 1.6E-25 182.7 12.0 191 134-371 8-203 (267)
263 cd05060 PTKc_Syk_like Catalyti 99.8 5.4E-21 1.2E-25 182.8 10.7 197 135-380 2-203 (257)
264 cd08217 STKc_Nek2 Catalytic do 99.8 3.7E-21 8E-26 183.9 9.4 203 134-384 6-218 (265)
265 cd07847 STKc_CDKL1_4 Catalytic 99.8 4.4E-21 9.4E-26 186.1 9.9 197 134-380 7-205 (286)
266 cd05090 PTKc_Ror1 Catalytic do 99.8 2.4E-21 5.1E-26 188.1 7.9 187 134-369 11-221 (283)
267 cd06612 STKc_MST1_2 Catalytic 99.8 6.7E-21 1.4E-25 181.6 10.8 185 134-370 9-195 (256)
268 cd07832 STKc_CCRK Catalytic do 99.8 3.7E-21 8.1E-26 186.6 9.1 190 134-370 6-197 (286)
269 PHA03390 pk1 serine/threonine- 99.8 3.7E-21 8.1E-26 185.4 9.0 175 136-371 24-203 (267)
270 cd05109 PTKc_HER2 Catalytic do 99.8 4E-20 8.7E-25 179.1 16.3 196 134-380 13-216 (279)
271 cd05054 PTKc_VEGFR Catalytic d 99.8 9.2E-21 2E-25 189.1 12.0 94 272-369 177-270 (337)
272 cd05111 PTK_HER3 Pseudokinase 99.8 8.3E-21 1.8E-25 184.1 11.4 134 242-380 81-216 (279)
273 cd08220 STKc_Nek8 Catalytic do 99.8 8.1E-21 1.7E-25 181.0 11.1 196 134-381 6-206 (256)
274 cd08224 STKc_Nek6_Nek7 Catalyt 99.8 8.8E-21 1.9E-25 181.9 11.3 189 134-371 8-203 (267)
275 cd05112 PTKc_Itk Catalytic dom 99.8 1.8E-20 4E-25 178.8 13.5 242 134-455 10-253 (256)
276 cd06610 STKc_OSR1_SPAK Catalyt 99.8 4.5E-21 9.7E-26 183.8 9.2 199 134-379 7-210 (267)
277 KOG0986 G protein-coupled rece 99.8 2.2E-21 4.9E-26 188.6 7.0 237 134-426 191-433 (591)
278 cd05042 PTKc_Aatyk Catalytic d 99.8 6.6E-21 1.4E-25 183.5 10.3 139 241-380 67-214 (269)
279 cd06613 STKc_MAP4K3_like Catal 99.8 8E-21 1.7E-25 181.7 10.8 195 134-380 9-208 (262)
280 cd05082 PTKc_Csk Catalytic dom 99.8 5.5E-20 1.2E-24 175.7 16.6 195 134-385 12-209 (256)
281 KOG0603 Ribosomal protein S6 k 99.8 2E-21 4.3E-26 196.9 6.9 234 134-434 328-566 (612)
282 PRK10359 lipopolysaccharide co 99.8 2.6E-20 5.7E-25 172.8 13.8 172 134-368 37-216 (232)
283 cd06626 STKc_MEKK4 Catalytic d 99.8 6.1E-21 1.3E-25 182.7 9.9 199 134-378 6-208 (264)
284 cd05107 PTKc_PDGFR_beta Cataly 99.8 4.5E-21 9.6E-26 195.5 9.4 92 273-369 244-336 (401)
285 cd05093 PTKc_TrkB Catalytic do 99.8 5E-21 1.1E-25 186.4 9.4 140 241-385 79-232 (288)
286 cd05062 PTKc_IGF-1R Catalytic 99.8 2.6E-20 5.6E-25 180.2 14.3 200 134-381 12-227 (277)
287 cd06647 STKc_PAK_I Catalytic d 99.8 9.6E-21 2.1E-25 185.1 11.4 193 134-378 25-217 (293)
288 cd05061 PTKc_InsR Catalytic do 99.8 5E-20 1.1E-24 179.4 16.2 200 134-381 12-227 (288)
289 cd05036 PTKc_ALK_LTK Catalytic 99.8 4.6E-20 9.9E-25 178.6 15.8 202 134-383 12-229 (277)
290 cd05115 PTKc_Zap-70 Catalytic 99.8 6.1E-20 1.3E-24 175.8 16.4 199 135-381 2-204 (257)
291 cd07844 STKc_PCTAIRE_like Cata 99.8 5.5E-21 1.2E-25 186.2 9.3 188 134-370 11-200 (291)
292 cd06646 STKc_MAP4K5 Catalytic 99.8 3.7E-21 8.1E-26 184.9 7.8 187 134-370 15-205 (267)
293 cd07855 STKc_ERK5 Catalytic do 99.8 9.7E-21 2.1E-25 188.6 11.0 202 134-380 11-216 (334)
294 PHA02882 putative serine/threo 99.8 2.6E-20 5.6E-25 182.2 13.8 132 245-379 103-236 (294)
295 cd08221 STKc_Nek9 Catalytic do 99.8 1.2E-20 2.5E-25 180.2 10.9 196 134-380 6-205 (256)
296 cd07840 STKc_CDK9_like Catalyt 99.8 5.3E-21 1.2E-25 185.3 8.7 199 134-385 5-211 (287)
297 cd05038 PTKc_Jak_rpt2 Catalyti 99.8 5.9E-21 1.3E-25 184.8 8.9 190 134-371 10-209 (284)
298 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.8 1E-20 2.2E-25 181.2 10.4 119 242-370 72-201 (258)
299 cd05613 STKc_MSK1_N N-terminal 99.8 3.1E-20 6.7E-25 180.9 14.0 195 134-371 6-205 (290)
300 KOG0607 MAP kinase-interacting 99.8 3.2E-20 6.9E-25 173.5 13.0 203 124-373 75-290 (463)
301 cd06652 STKc_MEKK2 Catalytic d 99.8 1.2E-20 2.7E-25 181.1 10.7 201 134-378 8-211 (265)
302 cd08215 STKc_Nek Catalytic dom 99.8 1.2E-20 2.5E-25 179.6 10.1 245 134-456 6-255 (258)
303 cd05066 PTKc_EphR_A Catalytic 99.8 7.5E-21 1.6E-25 183.0 8.8 203 134-383 10-217 (267)
304 cd08530 STKc_CNK2-like Catalyt 99.8 4E-20 8.6E-25 176.1 13.7 197 134-382 6-207 (256)
305 cd06651 STKc_MEKK3 Catalytic d 99.8 1E-20 2.2E-25 181.9 9.8 203 133-379 7-212 (266)
306 cd06616 PKc_MKK4 Catalytic dom 99.8 1.2E-20 2.6E-25 183.6 10.2 189 134-377 10-211 (288)
307 cd05099 PTKc_FGFR4 Catalytic d 99.8 1.2E-19 2.6E-24 179.1 17.5 174 241-426 90-281 (314)
308 cd06624 STKc_ASK Catalytic dom 99.8 1.7E-20 3.6E-25 180.5 11.1 187 134-370 14-207 (268)
309 cd07849 STKc_ERK1_2_like Catal 99.8 2.7E-20 5.9E-25 185.5 12.9 203 134-381 11-215 (336)
310 cd05058 PTKc_Met_Ron Catalytic 99.8 1.7E-20 3.7E-25 179.7 10.9 128 241-370 69-198 (262)
311 cd05065 PTKc_EphR_B Catalytic 99.8 9.1E-21 2E-25 182.5 9.0 203 134-385 10-221 (269)
312 cd05118 STKc_CMGC Catalytic do 99.8 2.4E-20 5.3E-25 180.4 12.1 197 134-380 5-203 (283)
313 cd07867 STKc_CDC2L6 Catalytic 99.8 4.1E-21 8.9E-26 189.4 6.7 188 132-370 5-212 (317)
314 cd06614 STKc_PAK Catalytic dom 99.8 1.7E-19 3.8E-24 175.2 18.0 187 134-371 25-213 (286)
315 cd05077 PTK_Jak1_rpt1 Pseudoki 99.8 2.5E-20 5.4E-25 179.1 11.9 120 241-369 76-204 (262)
316 KOG0983 Mitogen-activated prot 99.8 9.3E-22 2E-26 180.2 1.8 215 134-401 98-317 (391)
317 cd05032 PTKc_InsR_like Catalyt 99.8 9.1E-20 2E-24 176.1 15.8 200 134-384 12-230 (277)
318 cd07860 STKc_CDK2_3 Catalytic 99.8 3.2E-20 6.9E-25 180.0 12.6 185 134-371 6-198 (284)
319 KOG1094 Discoidin domain recep 99.8 5.7E-21 1.2E-25 190.7 7.4 214 133-394 543-759 (807)
320 PHA03210 serine/threonine kina 99.8 1.7E-21 3.6E-26 204.4 3.8 124 241-370 235-364 (501)
321 cd05056 PTKc_FAK Catalytic dom 99.8 9.6E-21 2.1E-25 182.4 8.7 138 242-385 79-218 (270)
322 cd05041 PTKc_Fes_like Catalyti 99.8 9.2E-20 2E-24 173.4 15.3 188 134-369 1-190 (251)
323 cd06607 STKc_TAO Catalytic dom 99.8 2.3E-20 4.9E-25 183.6 11.4 201 124-380 13-218 (307)
324 cd06633 STKc_TAO3 Catalytic do 99.8 2.8E-20 6E-25 183.6 12.0 208 120-380 15-224 (313)
325 cd05057 PTKc_EGFR_like Catalyt 99.8 1.5E-19 3.3E-24 175.0 17.0 204 134-386 13-222 (279)
326 cd07858 STKc_TEY_MAPK_plant Ca 99.8 4.2E-20 9.2E-25 184.2 13.4 202 134-380 11-213 (337)
327 cd05045 PTKc_RET Catalytic dom 99.8 3.2E-20 6.8E-25 180.9 12.2 137 241-383 75-237 (290)
328 cd08225 STKc_Nek5 Catalytic do 99.8 3.8E-20 8.2E-25 176.5 12.4 245 134-456 6-254 (257)
329 cd06627 STKc_Cdc7_like Catalyt 99.8 2.5E-20 5.4E-25 177.1 11.1 189 134-371 6-196 (254)
330 cd06639 STKc_myosinIIIB Cataly 99.8 1.3E-19 2.8E-24 176.5 16.2 197 134-379 28-236 (291)
331 cd07879 STKc_p38delta_MAPK13 C 99.8 1.5E-19 3.3E-24 180.7 17.1 200 133-381 20-220 (342)
332 smart00090 RIO RIO-like kinase 99.8 7.2E-20 1.6E-24 172.9 13.9 187 134-353 34-226 (237)
333 cd07854 STKc_MAPK4_6 Catalytic 99.8 8.6E-20 1.9E-24 182.4 15.2 209 134-379 11-222 (342)
334 cd05094 PTKc_TrkC Catalytic do 99.8 7.3E-21 1.6E-25 185.6 7.2 202 134-384 11-234 (291)
335 PF07714 Pkinase_Tyr: Protein 99.8 4.2E-21 9.2E-26 184.2 5.4 207 134-388 5-218 (259)
336 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.8 1.3E-19 2.7E-24 174.6 15.4 199 135-379 2-213 (269)
337 cd05092 PTKc_TrkA Catalytic do 99.8 1E-20 2.2E-25 183.5 7.8 138 241-383 79-232 (280)
338 cd07864 STKc_CDK12 Catalytic d 99.8 4.3E-20 9.3E-25 180.8 12.2 208 134-380 13-222 (302)
339 cd05583 STKc_MSK_N N-terminal 99.8 5E-20 1.1E-24 179.2 12.6 124 242-371 78-205 (288)
340 cd05053 PTKc_FGFR Catalytic do 99.8 1.7E-19 3.8E-24 175.8 16.4 202 134-382 18-241 (293)
341 cd07837 STKc_CdkB_plant Cataly 99.8 3.7E-20 8E-25 180.6 11.6 190 134-370 7-208 (295)
342 cd05086 PTKc_Aatyk2 Catalytic 99.8 2.7E-20 5.9E-25 179.3 10.5 141 242-383 68-216 (268)
343 cd05044 PTKc_c-ros Catalytic d 99.8 2.2E-20 4.7E-25 179.7 9.8 125 241-369 71-208 (269)
344 cd06606 STKc_MAPKKK Catalytic 99.8 8.8E-20 1.9E-24 173.4 13.9 191 134-371 6-200 (260)
345 cd06634 STKc_TAO2 Catalytic do 99.8 4.1E-20 8.9E-25 181.9 11.9 201 120-371 9-211 (308)
346 cd05050 PTKc_Musk Catalytic do 99.8 2.3E-20 5E-25 181.6 9.9 188 134-369 11-227 (288)
347 KOG0662 Cyclin-dependent kinas 99.8 6.5E-21 1.4E-25 164.8 5.3 186 134-369 8-197 (292)
348 cd07845 STKc_CDK10 Catalytic d 99.8 2.1E-20 4.6E-25 183.9 9.7 207 134-389 13-222 (309)
349 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.8 4.1E-20 8.9E-25 178.9 11.5 119 241-369 88-216 (274)
350 PTZ00024 cyclin-dependent prot 99.8 1.3E-20 2.9E-25 187.5 8.1 210 134-380 15-238 (335)
351 cd05098 PTKc_FGFR1 Catalytic d 99.8 1.7E-19 3.7E-24 177.3 15.7 203 133-383 23-250 (307)
352 KOG0666 Cyclin C-dependent kin 99.8 2.6E-21 5.6E-26 180.2 2.5 195 124-369 20-235 (438)
353 cd05046 PTK_CCK4 Pseudokinase 99.8 1.4E-20 3.1E-25 181.7 7.7 123 242-369 81-213 (275)
354 KOG1006 Mitogen-activated prot 99.8 2E-21 4.4E-26 177.4 1.6 209 134-398 70-289 (361)
355 KOG0695 Serine/threonine prote 99.8 4.8E-21 1E-25 179.8 4.0 234 130-411 251-494 (593)
356 cd07830 STKc_MAK_like Catalyti 99.8 2.8E-19 6.2E-24 173.2 16.4 186 134-370 5-195 (283)
357 cd05073 PTKc_Hck Catalytic dom 99.8 2E-19 4.4E-24 172.3 15.2 194 134-380 12-208 (260)
358 KOG0670 U4/U6-associated splic 99.8 5.8E-20 1.2E-24 181.3 11.4 185 135-371 439-632 (752)
359 cd07836 STKc_Pho85 Catalytic d 99.8 6.3E-20 1.4E-24 177.9 11.7 196 134-380 6-205 (284)
360 cd06618 PKc_MKK7 Catalytic dom 99.8 7.7E-20 1.7E-24 178.8 12.2 188 133-370 20-214 (296)
361 KOG0984 Mitogen-activated prot 99.8 1.7E-20 3.6E-25 165.7 6.6 216 134-402 52-276 (282)
362 cd07852 STKc_MAPK15 Catalytic 99.8 1.3E-19 2.8E-24 180.7 13.9 192 134-371 13-210 (337)
363 cd07843 STKc_CDC2L1 Catalytic 99.8 7.2E-20 1.6E-24 178.6 11.6 197 134-380 11-211 (293)
364 cd07865 STKc_CDK9 Catalytic do 99.8 5E-20 1.1E-24 180.8 10.4 206 134-380 18-228 (310)
365 KOG0614 cGMP-dependent protein 99.8 2.5E-20 5.4E-25 183.4 8.1 224 134-410 426-655 (732)
366 cd07834 STKc_MAPK Catalytic do 99.8 5.1E-20 1.1E-24 182.8 10.4 205 134-383 6-214 (330)
367 KOG2345 Serine/threonine prote 99.8 8.2E-20 1.8E-24 165.5 10.6 195 134-369 27-236 (302)
368 cd07829 STKc_CDK_like Catalyti 99.8 2.1E-19 4.6E-24 173.7 14.4 191 134-380 5-203 (282)
369 cd05110 PTKc_HER4 Catalytic do 99.8 6.4E-20 1.4E-24 180.1 10.8 199 134-382 13-218 (303)
370 cd08226 PK_STRAD_beta Pseudoki 99.8 3.2E-20 6.9E-25 184.4 8.7 199 135-380 5-214 (328)
371 cd05055 PTKc_PDGFR Catalytic d 99.8 2.2E-19 4.7E-24 176.4 14.5 191 133-369 40-238 (302)
372 cd07835 STKc_CDK1_like Catalyt 99.8 6.4E-20 1.4E-24 177.8 10.4 191 134-379 5-203 (283)
373 cd05100 PTKc_FGFR3 Catalytic d 99.8 3.5E-19 7.7E-24 177.3 15.9 140 241-386 90-247 (334)
374 cd06653 STKc_MEKK3_like_1 Cata 99.8 7E-20 1.5E-24 175.9 10.5 200 134-379 8-212 (264)
375 cd05576 STKc_RPK118_like Catal 99.8 2.5E-20 5.4E-25 176.4 7.0 173 139-370 4-178 (237)
376 cd07842 STKc_CDK8_like Catalyt 99.8 1.5E-19 3.2E-24 178.0 12.7 186 134-370 6-212 (316)
377 PLN00009 cyclin-dependent kina 99.8 1.6E-19 3.4E-24 176.3 12.0 196 134-379 8-207 (294)
378 cd07838 STKc_CDK4_6_like Catal 99.8 1E-19 2.2E-24 176.4 10.6 199 134-385 5-215 (287)
379 cd07870 STKc_PFTAIRE2 Catalyti 99.8 4.1E-19 9E-24 173.0 14.8 194 134-378 11-206 (291)
380 cd05144 RIO2_C RIO kinase fami 99.8 9.9E-19 2.1E-23 161.0 16.3 161 134-326 21-183 (198)
381 cd08528 STKc_Nek10 Catalytic d 99.8 8.3E-20 1.8E-24 175.7 9.5 206 134-381 6-218 (269)
382 cd07857 STKc_MPK1 Catalytic do 99.8 1.8E-19 3.8E-24 179.4 12.0 206 134-389 6-223 (332)
383 KOG0587 Traf2- and Nck-interac 99.8 4.7E-20 1E-24 192.0 7.8 271 124-458 17-306 (953)
384 cd07856 STKc_Sty1_Hog1 Catalyt 99.8 1.2E-19 2.6E-24 180.4 10.4 186 134-370 16-202 (328)
385 cd07831 STKc_MOK Catalytic dom 99.8 3.3E-19 7.1E-24 172.5 13.2 261 134-456 5-279 (282)
386 cd08216 PK_STRAD Pseudokinase 99.8 3.6E-19 7.7E-24 175.4 12.8 136 242-379 72-213 (314)
387 cd07866 STKc_BUR1 Catalytic do 99.8 1.9E-19 4.1E-24 176.7 10.7 201 134-380 14-231 (311)
388 cd05074 PTKc_Tyro3 Catalytic d 99.8 4.1E-19 9E-24 171.1 12.9 121 245-369 83-210 (273)
389 cd08222 STKc_Nek11 Catalytic d 99.8 6.2E-19 1.3E-23 168.7 13.4 189 134-370 6-201 (260)
390 KOG1026 Nerve growth factor re 99.8 2.3E-20 5E-25 194.9 3.2 228 134-410 492-741 (774)
391 KOG0584 Serine/threonine prote 99.8 1.3E-20 2.9E-25 190.3 1.4 201 121-369 34-238 (632)
392 KOG0665 Jun-N-terminal kinase 99.8 1.8E-20 3.9E-25 175.4 1.9 190 130-370 19-213 (369)
393 PLN03224 probable serine/threo 99.8 5.6E-19 1.2E-23 183.0 13.1 128 242-371 258-429 (507)
394 cd05119 RIO RIO kinase family, 99.8 3E-18 6.4E-23 156.1 16.1 166 134-324 3-170 (187)
395 cd05043 PTK_Ryk Pseudokinase d 99.8 9.1E-19 2E-23 169.6 13.5 198 134-380 12-224 (280)
396 smart00220 S_TKc Serine/Threon 99.8 1.3E-18 2.8E-23 163.4 13.2 180 140-370 1-182 (244)
397 PRK09188 serine/threonine prot 99.8 8.3E-19 1.8E-23 174.5 12.2 140 134-321 24-165 (365)
398 KOG0199 ACK and related non-re 99.8 1E-19 2.2E-24 184.9 5.3 207 134-388 116-328 (1039)
399 KOG4278 Protein tyrosine kinas 99.8 5.8E-19 1.3E-23 177.2 9.0 227 133-410 272-502 (1157)
400 cd00180 PKc Catalytic domain o 99.8 4.5E-18 9.8E-23 155.5 13.7 183 136-367 1-187 (215)
401 KOG0576 Mitogen-activated prot 99.8 2.3E-19 5E-24 181.8 5.1 252 134-455 21-288 (829)
402 KOG3653 Transforming growth fa 99.8 1.7E-18 3.7E-23 169.7 9.9 194 134-371 216-421 (534)
403 PRK14879 serine/threonine prot 99.8 5.1E-17 1.1E-21 150.9 19.5 144 134-319 2-145 (211)
404 KOG1151 Tousled-like protein k 99.8 2.2E-19 4.7E-24 174.1 3.5 206 134-380 469-688 (775)
405 KOG1025 Epidermal growth facto 99.8 7.9E-18 1.7E-22 174.0 14.8 208 133-389 701-914 (1177)
406 PLN00113 leucine-rich repeat r 99.8 6E-19 1.3E-23 199.7 6.4 178 133-371 695-875 (968)
407 KOG1163 Casein kinase (serine/ 99.7 1E-17 2.2E-22 151.4 11.8 137 134-318 21-164 (341)
408 KOG4257 Focal adhesion tyrosin 99.7 1.2E-18 2.6E-23 175.2 5.0 224 134-407 395-625 (974)
409 KOG1152 Signal transduction se 99.7 9.1E-19 2E-23 174.9 4.1 185 133-368 566-763 (772)
410 KOG2052 Activin A type IB rece 99.7 4.8E-18 1E-22 165.4 8.8 189 134-370 217-422 (513)
411 smart00221 STYKc Protein kinas 99.7 1.5E-17 3.2E-22 154.8 10.2 196 134-378 5-202 (225)
412 TIGR03724 arch_bud32 Kae1-asso 99.7 7.9E-17 1.7E-21 148.2 13.6 141 136-321 2-142 (199)
413 KOG0671 LAMMER dual specificit 99.7 1.1E-17 2.4E-22 160.2 5.7 188 134-371 95-306 (415)
414 KOG1345 Serine/threonine kinas 99.7 2.7E-17 5.8E-22 151.0 6.9 197 124-371 22-222 (378)
415 cd05610 STKc_MASTL Catalytic d 99.7 1.9E-17 4E-22 179.4 6.5 144 134-318 10-154 (669)
416 KOG1027 Serine/threonine prote 99.7 8.6E-18 1.9E-22 174.5 3.6 188 132-378 513-717 (903)
417 KOG1167 Serine/threonine prote 99.7 4E-17 8.6E-22 158.4 6.2 190 134-373 42-277 (418)
418 KOG0200 Fibroblast/platelet-de 99.7 1.9E-16 4E-21 169.4 9.6 233 134-426 302-567 (609)
419 PRK12274 serine/threonine prot 99.6 1.2E-15 2.5E-20 139.1 11.8 137 134-321 8-145 (218)
420 PRK10345 hypothetical protein; 99.6 7.7E-15 1.7E-19 135.6 12.9 141 133-319 7-161 (210)
421 KOG1165 Casein kinase (serine/ 99.6 2.9E-15 6.3E-20 141.3 10.0 187 134-379 34-239 (449)
422 PRK09605 bifunctional UGMP fam 99.6 6.2E-15 1.3E-19 156.0 13.3 143 132-320 337-479 (535)
423 cd05146 RIO3_euk RIO kinase fa 99.6 2.8E-14 6.1E-19 129.7 13.8 162 134-321 3-177 (197)
424 KOG1164 Casein kinase (serine/ 99.6 2.6E-14 5.6E-19 141.7 13.3 222 133-410 23-276 (322)
425 cd05151 ChoK Choline Kinase (C 99.6 2.9E-14 6.3E-19 127.4 12.4 131 134-320 4-139 (170)
426 PF01163 RIO1: RIO1 family; I 99.5 4.2E-14 9.1E-19 128.0 11.7 174 143-349 1-180 (188)
427 cd05120 APH_ChoK_like Aminogly 99.5 1.3E-13 2.8E-18 119.7 12.0 134 134-321 4-142 (155)
428 PRK01723 3-deoxy-D-manno-octul 99.5 1.8E-13 4E-18 129.5 13.5 148 134-319 37-193 (239)
429 COG3642 Mn2+-dependent serine/ 99.5 3E-12 6.5E-17 112.9 16.4 140 134-318 2-141 (204)
430 KOG1166 Mitotic checkpoint ser 99.4 1.8E-13 4E-18 148.4 9.0 139 134-318 704-851 (974)
431 COG1718 RIO1 Serine/threonine 99.4 1.7E-11 3.6E-16 113.2 16.6 183 134-350 54-241 (268)
432 PLN00181 protein SPA1-RELATED; 99.4 3.7E-13 8.1E-18 149.1 6.0 127 243-370 54-211 (793)
433 PF14531 Kinase-like: Kinase-l 99.4 4.6E-13 1E-17 128.2 5.5 243 133-410 17-280 (288)
434 PF06176 WaaY: Lipopolysacchar 99.4 1.9E-11 4.2E-16 111.8 15.0 80 231-318 105-184 (229)
435 COG0478 RIO-like serine/threon 99.4 2E-11 4.3E-16 113.8 15.3 176 134-345 97-272 (304)
436 COG0515 SPS1 Serine/threonine 99.3 1.1E-12 2.5E-17 127.3 4.1 188 134-371 6-208 (384)
437 KOG3087 Serine/threonine prote 99.3 5.3E-11 1.2E-15 104.5 13.1 147 133-317 12-165 (229)
438 KOG0590 Checkpoint kinase and 99.2 3.6E-12 7.8E-17 135.2 3.8 193 133-370 323-521 (601)
439 KOG0606 Microtubule-associated 99.2 1.5E-11 3.3E-16 131.7 7.0 172 278-455 153-336 (1205)
440 cd05154 ACAD10_11_like Acyl-Co 99.2 8.2E-11 1.8E-15 109.6 10.3 144 134-321 4-210 (223)
441 smart00750 KIND kinase non-cat 99.2 9.4E-11 2E-15 105.2 9.7 98 254-370 1-100 (176)
442 KOG1024 Receptor-like protein 99.1 1.6E-10 3.5E-15 111.6 7.4 172 242-426 361-543 (563)
443 KOG1290 Serine/threonine prote 99.1 3.7E-10 8E-15 112.0 9.6 144 124-303 71-223 (590)
444 KOG1240 Protein kinase contain 99.1 2.3E-11 5.1E-16 130.5 0.4 102 269-370 121-234 (1431)
445 PRK15123 lipopolysaccharide co 99.1 1.2E-09 2.7E-14 104.7 12.1 102 211-317 75-194 (268)
446 KOG0603 Ribosomal protein S6 k 99.0 9.1E-10 2E-14 112.8 7.9 162 227-411 55-218 (612)
447 KOG4158 BRPK/PTEN-induced prot 99.0 7E-10 1.5E-14 107.6 6.1 269 133-428 162-504 (598)
448 KOG2270 Serine/threonine prote 98.9 8.1E-08 1.8E-12 93.3 16.6 223 128-394 145-374 (520)
449 PF06293 Kdo: Lipopolysacchari 98.8 1.2E-08 2.6E-13 94.5 9.1 104 211-319 58-172 (206)
450 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 1.5E-07 3.1E-12 88.4 12.7 34 287-321 153-186 (226)
451 KOG1033 eIF-2alpha kinase PEK/ 98.7 5.8E-09 1.3E-13 105.0 2.2 120 243-370 330-458 (516)
452 PF01636 APH: Phosphotransfera 98.7 2.4E-07 5.2E-12 86.7 12.1 35 287-321 166-201 (239)
453 PRK10593 hypothetical protein; 98.7 1.4E-06 3.1E-11 85.3 17.6 93 110-256 2-100 (297)
454 KOG2268 Serine/threonine prote 98.6 6E-08 1.3E-12 92.8 7.1 157 134-320 98-254 (465)
455 cd05150 APH Aminoglycoside 3'- 98.6 1.4E-06 3.1E-11 82.7 15.4 35 287-321 163-197 (244)
456 PRK05231 homoserine kinase; Pr 98.6 1.4E-06 3.1E-11 86.2 15.5 33 287-319 187-219 (319)
457 cd05155 APH_ChoK_like_1 Unchar 98.5 1.5E-06 3.3E-11 82.1 12.8 35 287-321 164-198 (235)
458 PRK09902 hypothetical protein; 98.4 3.7E-06 8E-11 77.0 13.2 148 131-318 21-180 (216)
459 cd05153 HomoserineK_II Homoser 98.3 1E-05 2.2E-10 79.1 14.1 33 287-319 175-207 (296)
460 COG2112 Predicted Ser/Thr prot 98.2 1.5E-05 3.3E-10 70.3 10.8 126 134-316 28-154 (201)
461 PRK09550 mtnK methylthioribose 98.2 3E-05 6.5E-10 78.4 14.5 87 132-255 30-117 (401)
462 TIGR00938 thrB_alt homoserine 98.2 5.3E-05 1.1E-09 74.6 16.0 33 287-319 187-219 (307)
463 cd05157 ETNK_euk Ethanolamine 98.1 2.1E-05 4.5E-10 74.1 11.5 34 287-320 170-204 (235)
464 PLN02756 S-methyl-5-thioribose 98.1 8.1E-05 1.8E-09 75.1 15.2 108 104-253 6-119 (418)
465 KOG0590 Checkpoint kinase and 98.1 3.8E-08 8.2E-13 104.8 -9.6 125 241-369 93-225 (601)
466 PF03881 Fructosamin_kin: Fruc 98.1 3.4E-05 7.4E-10 74.8 11.7 92 109-254 2-97 (288)
467 TIGR02721 ycfN_thiK thiamine k 98.1 2.7E-05 5.8E-10 74.6 10.6 33 288-321 147-179 (256)
468 PRK12396 5-methylribose kinase 98.0 3.1E-05 6.7E-10 77.7 10.7 111 104-253 7-117 (409)
469 KOG1243 Protein kinase [Genera 98.0 1.6E-05 3.5E-10 82.8 8.1 180 136-372 20-201 (690)
470 PLN02876 acyl-CoA dehydrogenas 98.0 6.3E-05 1.4E-09 83.9 12.8 108 106-257 17-132 (822)
471 KOG1023 Natriuretic peptide re 98.0 3.1E-05 6.6E-10 79.6 9.3 130 242-371 20-155 (484)
472 PRK06148 hypothetical protein; 97.9 0.00023 4.9E-09 80.9 16.8 56 100-164 4-59 (1013)
473 PF10707 YrbL-PhoP_reg: PhoP r 97.8 0.00043 9.3E-09 63.4 12.7 156 133-319 6-174 (199)
474 cd05156 ChoK_euk Choline Kinas 97.7 0.00022 4.9E-09 69.9 10.8 35 287-321 179-217 (302)
475 COG3173 Predicted aminoglycosi 97.7 0.00063 1.4E-08 66.6 13.7 35 287-321 198-232 (321)
476 KOG0195 Integrin-linked kinase 97.7 5E-05 1.1E-09 70.9 5.1 230 134-425 196-433 (448)
477 COG2334 Putative homoserine ki 97.7 0.00045 9.8E-09 68.3 11.9 29 289-317 199-228 (331)
478 cd05152 MPH2' Macrolide 2'-Pho 97.7 0.0005 1.1E-08 66.6 11.8 35 287-321 185-220 (276)
479 COG3001 Uncharacterized protei 97.6 0.0012 2.7E-08 60.8 13.2 96 109-257 2-99 (286)
480 TIGR01767 MTRK 5-methylthiorib 97.6 0.00016 3.5E-09 71.7 8.1 32 287-319 192-223 (370)
481 PRK11768 serine/threonine prot 97.6 0.0012 2.6E-08 65.6 13.6 31 287-319 196-226 (325)
482 KOG0601 Cyclin-dependent kinas 97.6 4.9E-06 1.1E-10 85.5 -3.8 192 134-369 120-322 (524)
483 PRK06149 hypothetical protein; 97.5 0.0011 2.5E-08 75.1 13.7 58 97-164 7-64 (972)
484 KOG0601 Cyclin-dependent kinas 97.4 7.4E-05 1.6E-09 77.0 2.2 142 134-318 271-417 (524)
485 KOG3741 Poly(A) ribonuclease s 97.3 0.0077 1.7E-07 61.6 15.3 138 141-318 289-443 (655)
486 PLN02236 choline kinase 97.2 0.0042 9.2E-08 62.1 12.6 35 287-321 200-235 (344)
487 KOG2269 Serine/threonine prote 97.1 0.0034 7.4E-08 60.7 9.7 170 127-319 252-434 (531)
488 PF13095 FTA2: Kinetochore Sim 96.7 0.011 2.4E-07 54.0 9.6 54 245-315 153-206 (207)
489 PF12260 PIP49_C: Protein-kina 96.6 0.005 1.1E-07 56.0 6.7 85 232-318 21-112 (188)
490 PLN02421 phosphotransferase, a 96.6 0.013 2.8E-07 58.3 9.9 33 289-321 184-217 (330)
491 cd05610 STKc_MASTL Catalytic d 96.5 0.0019 4.1E-08 70.6 3.9 93 290-388 499-592 (669)
492 PRK10271 thiK thiamine kinase; 96.4 0.0027 5.9E-08 57.3 3.6 33 288-321 78-110 (188)
493 PF04655 APH_6_hur: Aminoglyco 96.0 0.021 4.6E-07 54.3 7.4 30 134-164 8-37 (253)
494 COG5072 ALK1 Serine/threonine 96.0 0.02 4.3E-07 56.6 7.1 179 127-317 153-370 (488)
495 PF07914 DUF1679: Protein of u 95.6 0.15 3.3E-06 52.2 12.0 55 106-162 12-77 (414)
496 PTZ00384 choline kinase; Provi 95.3 0.23 5E-06 50.4 12.3 32 287-319 227-258 (383)
497 TIGR02906 spore_CotS spore coa 95.1 0.036 7.7E-07 54.4 5.6 31 287-318 187-217 (313)
498 PTZ00296 choline kinase; Provi 94.9 0.45 9.8E-06 49.2 13.1 33 287-320 284-316 (442)
499 KOG0606 Microtubule-associated 94.6 0.006 1.3E-07 67.1 -1.6 146 242-389 877-1048(1205)
500 KOG1266 Protein kinase [Signal 94.5 0.1 2.2E-06 50.8 6.6 88 214-309 125-219 (458)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=6.6e-81 Score=638.43 Aligned_cols=431 Identities=40% Similarity=0.666 Sum_probs=395.5
Q ss_pred HHHhHHccCchhHHhHHHHHHHHHHHHHHHHHHhhh--cCccchhhhHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCH
Q 012411 14 LLARNYGSRPVQLLRRTLQILVALGSFSLKLLIDQR--NGVLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPP 91 (464)
Q Consensus 14 ~~~~~~~~~~~~~~~R~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p~ 91 (464)
.+....+.++...+.+.......+........+... .........+++++|+++|++|||+|||+||+||||+|++|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~ 88 (517)
T COG0661 9 RLPRIIRVRLRYLLGRLLRLTGRLALLLRLLSWLGKSKLASSEELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPP 88 (517)
T ss_pred hhccceeeeehHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCH
Confidence 334444455555555555555433333332222221 112233456789999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHH
Q 012411 92 EYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGL 171 (464)
Q Consensus 92 ~~~~~l~~l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~ 171 (464)
+|+++|++|||++||+|++.+.++|++++|.+++++|++|+++|||+||+||||+|+++ +|+.|||||+||++.+.+..
T Consensus 89 e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~ 167 (517)
T COG0661 89 EYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEA 167 (517)
T ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCCchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHHHHHHhchhc-ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEee
Q 012411 172 DFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEW 250 (464)
Q Consensus 172 d~~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~ 250 (464)
|+.+|+.++.+++++.+. ...++.+++++|.+.+..|+||++||+|+++|+++|++.+.++||+|||++|++++|||||
T Consensus 168 DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~ 247 (517)
T COG0661 168 DLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEW 247 (517)
T ss_pred HHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEe
Confidence 999999999999998876 4589999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHH
Q 012411 251 VEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHV 330 (464)
Q Consensus 251 ~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~ 330 (464)
++|.++++....+..|.+...+....+.+++.|+..+|+||+|||||||+++.+|++.++|||+++.++++.+..++.++
T Consensus 248 i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~r~~l~~~~ 327 (517)
T COG0661 248 IDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPKFRRYLAELL 327 (517)
T ss_pred eCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCCHHHHHHHHHHH
Confidence 99999999998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 331 VHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
.++.++|+..++..+.++|++++..|...+...+..++..+++.+.+..+++.+...+....+.+++.+|++++.+.|++
T Consensus 328 ~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~p~~l~ll~r~~ 407 (517)
T COG0661 328 LAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRAVLEPIYGKPLEEISFGEILDKLFEVARRFPMRLPPELVLLQRTL 407 (517)
T ss_pred HHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhhCCChhhccHHHHHHHHHHHHHhcCccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCChHHhhhHHHHHHhcCCCCHH
Q 012411 411 TVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (464)
Q Consensus 411 ~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (464)
.++||+++.+||++++.+.+.|++.+++....+|.
T Consensus 408 ~~vEg~~~~ldp~~~~~~~a~p~~~~~~~~~~~~~ 442 (517)
T COG0661 408 LLVEGVGRQLDPRFNLWAVAQPLLAKWLKKQLSPK 442 (517)
T ss_pred HHHHHHHHhhCccccHHHHhhHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999888876
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=6e-80 Score=635.95 Aligned_cols=421 Identities=28% Similarity=0.477 Sum_probs=392.3
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHhhhcC-------c-------cchhhhHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCC
Q 012411 25 QLLRRTLQILVALGSFSLKLLIDQRNG-------V-------LDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICP 90 (464)
Q Consensus 25 ~~~~R~~~i~~~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p 90 (464)
..+.|+.+|+.++.+||++.++....- . .......+|+++|.+|++|||+|||+||+||||+|++|
T Consensus 2 ~~~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP 81 (537)
T PRK04750 2 MELFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFP 81 (537)
T ss_pred chhHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCC
Confidence 467899999999999999887653210 0 01122357999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHH
Q 012411 91 PEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIG 170 (464)
Q Consensus 91 ~~~~~~l~~l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~ 170 (464)
++|+++|++|||++||+|++.+++++++++|.+++++|.+||++|+|+||+||||+|+++.+|++||||+++|++.+.+.
T Consensus 82 ~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~ 161 (537)
T PRK04750 82 PDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVID 161 (537)
T ss_pred HHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999855999999999999999999
Q ss_pred HHHHHHHHHHHHHHhchhc-ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEe
Q 012411 171 LDFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTME 249 (464)
Q Consensus 171 ~d~~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE 249 (464)
.|+++|+.++.+++++.+. ...++.++++++.+.+.+|+||.+|++|+.+++++|.+.+.++||++|+++|++.+||||
T Consensus 162 ~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE 241 (537)
T PRK04750 162 ADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVME 241 (537)
T ss_pred HHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEe
Confidence 9999999999999887653 457889999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCC----cEEEEecCCCCcCCHHHHHH
Q 012411 250 WVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG----KLAFLDFGMMSETPEEARFA 325 (464)
Q Consensus 250 ~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g----~i~l~DFGl~~~l~~~~~~~ 325 (464)
|++|+++++.......+.+...+....+..++.+++.+|+||+|||||||+++++| +++++|||+++.++++.+..
T Consensus 242 ~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~~r~~ 321 (537)
T PRK04750 242 RMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKEDKRY 321 (537)
T ss_pred eecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHHHHHH
Confidence 99999999876667778888888888899999999999999999999999999988 99999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHH
Q 012411 326 IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYAL 405 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~ 405 (464)
+...+.++..+|++.++..+.++|.+++.+|+..+...+..+++++++.++++.+++.++.++....+++++.+||+++.
T Consensus 322 l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~l~~i~~~~~l~~l~~~~r~~~~~ip~~l~l 401 (537)
T PRK04750 322 LAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFDKPLAEISFGHVLLRLFNTARRFNVEIQPQLVL 401 (537)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHCCCcccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCChHHhhhHHHHHHhcCCCCHH
Q 012411 406 ILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (464)
Q Consensus 406 l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (464)
+.|+++++||+++++||++|+++.++||+.+++.++.+|.
T Consensus 402 l~ktl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~ 441 (537)
T PRK04750 402 LQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPR 441 (537)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChH
Confidence 9999999999999999999999999999998887766653
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=9.3e-77 Score=606.73 Aligned_cols=418 Identities=31% Similarity=0.535 Sum_probs=385.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhhcC---------------ccchhhhHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCH
Q 012411 27 LRRTLQILVALGSFSLKLLIDQRNG---------------VLDQNKRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPP 91 (464)
Q Consensus 27 ~~R~~~i~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p~ 91 (464)
++|+.+|+.++.+||+++++.+..+ ..+.....+|+++|++|++|||+|||+||+||||+|++|+
T Consensus 1 ~~R~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~ 80 (437)
T TIGR01982 1 LRRLRRIIRVLIRYGFLALVESPIGPLSLRLLRRLLLPFSNRENRLMSRGERLRLALEELGPTFIKFGQTLSTRADLLPA 80 (437)
T ss_pred CHHHHHHHHHHHHhCcHHHhhhhcccchhhhHhhhhhhhcccccccccHHHHHHHHHHHcCchhHHHhHHHHhCcccCCH
Confidence 4799999999999999987654110 0111234679999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHH
Q 012411 92 EYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGL 171 (464)
Q Consensus 92 ~~~~~l~~l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~ 171 (464)
+|+++|++|||++||+|++.+++++++++|.+++++|.+||++|||+||+||||+|+++ +|+.||||+++|++.+.+..
T Consensus 81 ~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~ 159 (437)
T TIGR01982 81 DIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAA 159 (437)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHHHHHHhchhc-ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEee
Q 012411 172 DFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEW 250 (464)
Q Consensus 172 d~~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~ 250 (464)
|+.+++.++.+++++.+. ...++..+++++...+.+|+||.+||+|+.+|++++++.+.+++|++|+++|+..+|||||
T Consensus 160 Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~ 239 (437)
T TIGR01982 160 DIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEW 239 (437)
T ss_pred HHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEe
Confidence 999999999998887653 3468899999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHH
Q 012411 251 VEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHV 330 (464)
Q Consensus 251 ~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~ 330 (464)
++|++|.+.......+.+...++...+..++.++|..|++|+||||+||+++++|+++++|||+++.++++.+..+..++
T Consensus 240 i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~~r~~l~~l~ 319 (437)
T TIGR01982 240 IDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSEEDRRYLAEIL 319 (437)
T ss_pred ECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCHHHHHHHHHHH
Confidence 99999999866555566666666666667899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 331 VHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
.++..+|+..++..+..+|..++.+|...+...+..++..+.+.+..+.++++++.++..+.+++++.+|+++..+.|++
T Consensus 320 ~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~r~l 399 (437)
T TIGR01982 320 YGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIFGQPLKEISVGRLLAGLFKITRDFNMELQPQLLLLQKTL 399 (437)
T ss_pred HHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHCCccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCChHHhhhHHHHHHhcCCCCHH
Q 012411 411 TVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPY 445 (464)
Q Consensus 411 ~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~ 445 (464)
+++||++..+||++++.+.++||+.+.+.++.+|.
T Consensus 400 ~~leg~~~~L~p~~~~~~~~~p~~~~~~~~~~~~~ 434 (437)
T TIGR01982 400 LTVEGVGRQLDPDLNMWKVAEPFVKRWIRKRLGPK 434 (437)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcChh
Confidence 99999999999999999999999988887766654
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=7.5e-63 Score=502.55 Aligned_cols=293 Identities=42% Similarity=0.677 Sum_probs=276.4
Q ss_pred hhHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCccc
Q 012411 57 KRKRAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPI 136 (464)
Q Consensus 57 ~~~~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p~~~~~~l~~l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pi 136 (464)
+...|++|++++..|||+|||+||.+|||+|++|+||+++|+.|||++||+|++++.+++++++|.+++++|++||++||
T Consensus 90 ~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~pi 169 (538)
T KOG1235|consen 90 LLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPI 169 (538)
T ss_pred HHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchh
Confidence 34556999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHH
Q 012411 137 AAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQ 216 (464)
Q Consensus 137 g~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~ 216 (464)
|++|+||||+|+++ +|+.||||||||++++.+..|+.+++.++..++++.+ +.++..+++|+.+.+..|+||.+||+
T Consensus 170 aaASlaQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p--~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 170 AAASLAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFP--DFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred hhcchhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCc--CCchhhHHHHHHhhhHhhcchHHHHH
Confidence 99999999999999 8999999999999999999999999999999988875 55699999999999999999999999
Q ss_pred HHHHHHHHhCCCC---CEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 217 NARRFKKLYADKE---DVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 217 n~~~~~~~~~~~~---~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|+++++++|++.+ .|+||+|||++|++++||||||+|..++|...+.+.+.+...+.......+..||+..|+||+|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaD 326 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHAD 326 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCC
Confidence 9999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEcc----CCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 012411 294 PHPGNLLATP----EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (464)
Q Consensus 294 lkp~Nili~~----~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (464)
||||||++++ ++.+.+.|||+++.+++..|..++.++.++...|...+....-.+|...
T Consensus 327 PHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~ 389 (538)
T KOG1235|consen 327 PHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL 389 (538)
T ss_pred CCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc
Confidence 9999999994 5679999999999999999999999999999866666666666666543
No 5
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-47 Score=366.99 Aligned_cols=375 Identities=23% Similarity=0.339 Sum_probs=330.3
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC-CHHhhhcccCCccccc
Q 012411 60 RAAELRRIFTRLGPTFVKLGQGLSTRPDICPPEYLEELSELQDALPTFPDAEAFSCIERELGL-TLDSIFSSISPSPIAA 138 (464)
Q Consensus 60 ~~~~l~~~l~~lg~~~iK~gQ~ls~r~d~~p~~~~~~l~~l~d~~~p~~~~~~~~~i~~~lg~-~~~~~f~~~~~~pig~ 138 (464)
.-+-|+.++|..||+|||+||+.|||+|++++++|.+|++|+.+++|.++....+.+..++|. .++++|..|++.|||+
T Consensus 120 W~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGs 199 (565)
T KOG1236|consen 120 WLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGS 199 (565)
T ss_pred HHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccccc
Confidence 447788999999999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred ceecEEEEEEEc---------------cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHH
Q 012411 139 ASLGQVYKAQLK---------------YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (464)
Q Consensus 139 Gs~gqV~~a~~~---------------~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (464)
|+++|||+|..+ ...+.+|||+.+|++.+.+..|+.+|+..+++.+........++...++.|.-
T Consensus 200 G~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v 279 (565)
T KOG1236|consen 200 GCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSV 279 (565)
T ss_pred chhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHHHH
Confidence 999999999763 12357999999999999999999999999999987766777888889999999
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH-HHHHHHHHHHHHH
Q 012411 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV-LDLVNTGIQCSLR 282 (464)
Q Consensus 204 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~-~~~~~~~i~~~l~ 282 (464)
.+..++|..+||.|+.+|..+|+....+.+|+++..+.++.+|+-+|..|.++.......+++... ..+...+....++
T Consensus 280 ~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~Allk 359 (565)
T KOG1236|consen 280 GLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLK 359 (565)
T ss_pred HHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988875544433222 2344455666788
Q ss_pred HHHHCCcccCCCCCcceEEcc--C-----------------------------------------CcEEEEecCCCCcCC
Q 012411 283 QLLEYGYFHADPHPGNLLATP--E-----------------------------------------GKLAFLDFGMMSETP 319 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~--~-----------------------------------------g~i~l~DFGl~~~l~ 319 (464)
++.-++++|+|+|||||++.. + -+++++|=|++..++
T Consensus 360 Ml~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~kLs 439 (565)
T KOG1236|consen 360 MLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTKLS 439 (565)
T ss_pred HHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchhhhccC
Confidence 899999999999999999962 2 358999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc-cCCCCcCcHHHHHHHHHHHHhhCCCC
Q 012411 320 EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL-NSSVSELNFKTIVDGLGAVLYQYPFN 398 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~ 398 (464)
+..+.++.+++.+.+..+......-+.+..-.....|...+...+++++.... .......+.++++.++....++|+.+
T Consensus 440 ~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st~sl~tl~i~~ll~em~tmvreH~V~ 519 (565)
T KOG1236|consen 440 HQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARSTKSLRTLNIGDLLSEMFTMVREHHVR 519 (565)
T ss_pred hhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhhhcccCcCcHHHHHHHHHHHHHHhhee
Confidence 99999999999999988888777777666555556788888888999988766 44566678899999999999999999
Q ss_pred CChHHHHHHHHHHHHHHhhcccCCCCChHHhhhHHH
Q 012411 399 VPAYYALILRSLTVLEGLALYADPNFKVLAASYPYF 434 (464)
Q Consensus 399 ~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~ 434 (464)
+..+++..+-+++.+||.++++||+++++....+++
T Consensus 520 ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l 555 (565)
T KOG1236|consen 520 IDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLL 555 (565)
T ss_pred eccchHHHHHHHHHHhhhccccCCCcchhhhHHHHH
Confidence 999999999999999999999999999988444443
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-32 Score=263.26 Aligned_cols=198 Identities=20% Similarity=0.202 Sum_probs=151.2
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCC-----hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-----IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-----~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 207 (464)
.+.||+||||.||+|+++.+|..||||.+... ..+....++.+|+.+ +|+|++.+++-+
T Consensus 15 ~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel----------~H~nIV~l~d~~------ 78 (429)
T KOG0595|consen 15 SREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL----------KHPNIVRLLDCI------ 78 (429)
T ss_pred hhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc----------CCcceeeEEEEE------
Confidence 35599999999999999999999999998654 222233333443333 366665555422
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 012411 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 208 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (464)
+..+..|||||||+||+|+++.... ....+..+....|+..|+++||+
T Consensus 79 -------------------------------~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~ 127 (429)
T KOG0595|consen 79 -------------------------------EDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE 127 (429)
T ss_pred -------------------------------ecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2235668999999999999986644 44566777888999999999999
Q ss_pred CCcccCCCCCcceEEccC------CcEEEEecCCCCcCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 012411 287 YGYFHADPHPGNLLATPE------GKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~------g~i~l~DFGl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~s 359 (464)
++|+|||+||.|||++.. -.+||+|||+++.+.+. .-.++|| .|-+|+++++..+.++.++|+||
T Consensus 128 ~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcG--------SplYMAPEV~~~~~YdAKADLWS 199 (429)
T KOG0595|consen 128 NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCG--------SPLYMAPEVIMSQQYDAKADLWS 199 (429)
T ss_pred CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhC--------CccccCHHHHHhccccchhhHHH
Confidence 999999999999999864 34899999999999765 3334444 56666677777777799999999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHH
Q 012411 360 IVPALRNFFDDALNSSVSELNFKTIVDG 387 (464)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 387 (464)
+|+.++++++ +..|++..+..++...
T Consensus 200 iG~Ilyq~l~--g~~Pf~a~t~~eL~~~ 225 (429)
T KOG0595|consen 200 IGTILYQCLT--GKPPFDAETPKELLLY 225 (429)
T ss_pred HHHHHHHHHh--CCCCccccCHHHHHHH
Confidence 9999999999 4577777777776653
No 7
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=99.98 E-value=9.8e-32 Score=246.08 Aligned_cols=328 Identities=23% Similarity=0.270 Sum_probs=257.7
Q ss_pred CCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChH
Q 012411 87 DICPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE 166 (464)
Q Consensus 87 d~~p~~~~~~l~~l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~ 166 (464)
.++|+...+-+++.++.+..||..++.+++..++|.+|.+-|++||+.|.+++|+||||+|+++ +|.+||||+|+|++.
T Consensus 8 ~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~-~g~eVavKiQYPGva 86 (363)
T KOG1234|consen 8 SLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLA-DGPEVAVKIQYPGVA 86 (363)
T ss_pred CccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhc-CCCeeeeecCCCchh
Confidence 4799999999999999999999999999999999999999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceE
Q 012411 167 EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVL 246 (464)
Q Consensus 167 ~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~L 246 (464)
+.++.|+..+..+...-..+. ...-+..+++..++.+..|.||.+||....+|+..+++.+.++||.|+.++|+.+++
T Consensus 87 ~sI~SD~~nl~~lLn~s~llP--kGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct~rvl 164 (363)
T KOG1234|consen 87 RSIDSDANNLSRLLNFSGLLP--KGLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCTVRVL 164 (363)
T ss_pred hhccCcHHHHHHHHhhccccc--ccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHHhhccchhh
Confidence 999999999888876543332 235567788888999999999999999999999999999999999999999999999
Q ss_pred EEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccC-CcEEEEecCCCCcCCHHHHHH
Q 012411 247 TMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFA 325 (464)
Q Consensus 247 vmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~-g~i~l~DFGl~~~l~~~~~~~ 325 (464)
+||++.|.++....... ......+....+..+|+.++...+...||.-+|+|.+.. .+|.|+|||.++.++.+....
T Consensus 165 t~el~~G~pid~~~~~s--Q~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~tk~i~LlDFGAsr~y~~~F~d~ 242 (363)
T KOG1234|consen 165 TLELGQGLPIDKTAKLS--QETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGRTKKIELLDFGASREYGEKFIDK 242 (363)
T ss_pred hhhhhcCccchhhhccc--HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCCcceEEEEeccccccccHHHHHH
Confidence 99999999987652211 111223344555668999999999999999999999854 569999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHcCCCCCC-CCcchHHHHHHHHHH---Hhcc---CCCCcCcHHHHHHHHHHHHhhCCCC
Q 012411 326 IIGHVVHMVNRDYEAMARDYYALDFLSPD-VDVTPIVPALRNFFD---DALN---SSVSELNFKTIVDGLGAVLYQYPFN 398 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~D~~sl~~~l~~~~~---~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~ 398 (464)
++.++.+...+|.+.+.+.-.++|+++.- +++-. .+-+...+. ++.. ..+.+-+...-+..+..++-++...
T Consensus 243 Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~~m~-DAHv~sv~ilgepfa~~~pydF~~q~~t~ri~~lipvmL~hRL~ 321 (363)
T KOG1234|consen 243 YIRLLKAAADRDREGVIEMSRELGFLTGYESKVME-DAHVESVMILGEPFASDGPYDFGDQTVTDRIQNLIPVMLRHRLC 321 (363)
T ss_pred HHHHHHHHHhcchHHHHHHHHHhcccccchHHHHH-HHhhhHhhhccccccCCCCcCcCccHHHHHHHhhhHHHHhccCC
Confidence 99999999999999999988899987642 21110 111111111 1111 1122222333444555666677777
Q ss_pred CChH-HHHHHHHHHHHHHhhccc
Q 012411 399 VPAY-YALILRSLTVLEGLALYA 420 (464)
Q Consensus 399 ~p~~-~~~l~r~l~~leg~~~~l 420 (464)
.||+ .-.+-|.+...=-+|..+
T Consensus 322 pPPeEtYsLHRklsG~fL~cakl 344 (363)
T KOG1234|consen 322 PPPEETYSLHRKLSGAFLLCAKL 344 (363)
T ss_pred CCcHHHHHHHHHhhhHHHHHHHh
Confidence 6654 456666664332234444
No 8
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.97 E-value=8.7e-33 Score=263.16 Aligned_cols=252 Identities=21% Similarity=0.285 Sum_probs=184.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..||+|+-|.||+++++.||+.+|+|+++-+... ++++++.+|+++++
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~--------------------------------~~~~Qi~rEl~il~ 132 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDP--------------------------------ALQKQILRELEILR 132 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCH--------------------------------HHHHHHHHHHHHHh
Confidence 6799999999999999999999999999544322 23344555555544
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccC--CC-CceEEEeeecCcccCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHH-CC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDY--TS-GKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLE-YG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~-~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~-~g 288 (464)
+.. .++ |...|..+ .. ...|+||||+||+|+++... ...++.....+..++..||.|||+ ++
T Consensus 133 ~~~-----------spy--IV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~ 199 (364)
T KOG0581|consen 133 SCQ-----------SPY--IVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERK 199 (364)
T ss_pred hCC-----------CCC--eeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccC
Confidence 331 111 11112111 12 36799999999999987442 223344555667888899999995 99
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
|+|||+||+|||++..|+|||+|||.++.+......++.||.. +..||++....| +.+.|+||||-.+.|+.
T Consensus 200 IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~---YMsPERi~g~~Y-----s~~sDIWSLGLsllE~a 271 (364)
T KOG0581|consen 200 IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSA---YMSPERISGESY-----SVKSDIWSLGLSLLELA 271 (364)
T ss_pred eeeccCCHHHeeeccCCCEEeccccccHHhhhhhccccccccc---ccChhhhcCCcC-----CcccceecccHHHHHHh
Confidence 9999999999999999999999999999987775556666544 445777754443 77899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChH-HHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHHHhcCC
Q 012411 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAY-YALILRSLTVLEGLALYADPNFKVLAA---SYPYFAKRLLTD 441 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~-~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~~l~~~ 441 (464)
.+.++.+.........++-+..++.+.+..+|.. |..-+++++ ..|++-||.-|.... .|||+.+....+
T Consensus 272 ~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV---~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~ 345 (364)
T KOG0581|consen 272 IGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFV---SCCLRKDPSERPSAKQLLQHPFIKKFEDPN 345 (364)
T ss_pred hCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHH---HHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence 9777665543333345666677778888899987 777788874 477888999888776 799987655443
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.97 E-value=3.3e-31 Score=245.16 Aligned_cols=189 Identities=20% Similarity=0.207 Sum_probs=145.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
-.+|.||+|.|++++++.||+.||||.....-.+. .+-+...+.+.-+..+.|+|++.+++.|++.
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~-----~VkKIAlREIrmLKqLkH~NLVnLiEVFrrk--------- 73 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDP-----VVKKIALREIRMLKQLKHENLVNLIEVFRRK--------- 73 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCccH-----HHHHHHHHHHHHHHhcccchHHHHHHHHHhc---------
Confidence 46999999999999999999999999986432211 1111111222222234699999999998864
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
...+||.|||+..-|.++.. ...|.+.. ..+..|+..++.++|+++++|
T Consensus 74 ----------------------------rklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IH 124 (396)
T KOG0593|consen 74 ----------------------------RKLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNNCIH 124 (396)
T ss_pred ----------------------------ceeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcCeec
Confidence 56679999999866666533 34555543 455678888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||+||+||||+.+|.+||+|||.++.+.. .-..++..+.+.+++.||.+..+. .+++.+|+|++||.+.|++++
T Consensus 125 RDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPELLvGDt----qYG~pVDiWAiGCv~aEl~~G 198 (396)
T KOG0593|consen 125 RDIKPENILITQNGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPELLVGDT----QYGKPVDIWAIGCVFAELLTG 198 (396)
T ss_pred ccCChhheEEecCCcEEeccchhhHhhcC-CcchhhhhhhhhhccChhhhcccC----cCCCcccchhhhHHHHHHhcC
Confidence 99999999999999999999999999874 224567777888999999886543 247899999999999999983
No 10
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-32 Score=266.94 Aligned_cols=252 Identities=17% Similarity=0.228 Sum_probs=187.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH-
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV- 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~- 212 (464)
+.||.|||++|++|+.+.+++++||||..+.. ++|. + -++|.
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~---------Iike--------------~--------------KvkYV~ 121 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY---------IIKE--------------K--------------KVKYVT 121 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH---------HHhh--------------c--------------ccchhh
Confidence 66999999999999999999999999975320 0000 0 00111
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
+|-..+.+ +.+++.|.--..-.......|+|+||+++|+|.+++. .........+.+..+|..+++|||++||||
T Consensus 122 ~Ek~~l~~----L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIH 197 (604)
T KOG0592|consen 122 REKEALTQ----LSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIH 197 (604)
T ss_pred HHHHHHHH----hhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCcee
Confidence 11111122 2244544322222233466799999999999988743 223335566788889999999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH-------HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-------IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
||+||+|||++.||+++|.|||.++.+++.....- +..-...+-+..+++.+++..-+.+++..|+|+|||++
T Consensus 198 RDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCil 277 (604)
T KOG0592|consen 198 RDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCIL 277 (604)
T ss_pred ccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHH
Confidence 99999999999999999999999999877644310 00001223455777788888888999999999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHH
Q 012411 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFA 435 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~ 435 (464)
+.|+. +..|+.+.+.--+++.|..+-+.++..+|+....|++-+ +.+||+-|+... +|||+.
T Consensus 278 yQmla--G~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KL-------Lv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 278 YQMLA--GQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKL-------LVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred HHHhc--CCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHH-------HccCccccccHHHHhhCcccc
Confidence 99999 568888888777888999999999999999999999999 557887777665 788864
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4.1e-32 Score=260.50 Aligned_cols=252 Identities=19% Similarity=0.231 Sum_probs=169.7
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.+|+|+||.|-+|..+.||+.||||+++................+.+.++.+.+++||+++.+.+-|.
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~---------- 246 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFE---------- 246 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeee----------
Confidence 4789999999999999999999999999874322111111111111222223333344666666555332
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
-....|+||||++||.|.+... ....+.+..+.+..|+..++.|||+.||+|
T Consensus 247 ---------------------------~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~H 299 (475)
T KOG0615|consen 247 ---------------------------VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIH 299 (475)
T ss_pred ---------------------------cCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCccc
Confidence 1234489999999999988543 334557778889999999999999999999
Q ss_pred CCCCCcceEEccC---CcEEEEecCCCCcCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 292 ADPHPGNLLATPE---GKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 292 ~Dlkp~Nili~~~---g~i~l~DFGl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|||||+|||+..+ -.+||.|||+++...+. ...++|||+.+.+ ||.+...= ..+.+.++|+||+||.++-+
T Consensus 300 RDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvA---PEVl~~kg--~~~~~~kVDiWSlGcvLfvc 374 (475)
T KOG0615|consen 300 RDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVA---PEVLASKG--VEYYPSKVDIWSLGCVLFVC 374 (475)
T ss_pred ccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccC---hhheecCC--eecccchheeeeccceEEEE
Confidence 9999999999866 56999999999987533 4566777644433 33332210 11234588999999999998
Q ss_pred HHHhccCCCCcC-cHHHHHHHHHHHHhhCC----CCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHH
Q 012411 368 FDDALNSSVSEL-NFKTIVDGLGAVLYQYP----FNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFA 435 (464)
Q Consensus 368 ~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~----~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~ 435 (464)
++++ .|+++. .-..+.+++.+..+.+. ..+..+...++..| +.+||+-|+++. .+||+.
T Consensus 375 LsG~--pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~m-------L~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 375 LSGY--PPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWM-------LVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred eccC--CCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHh-------hEeCcccCcCHHHHhcChhhh
Confidence 8865 455443 22335666766544332 12334445555555 778998887765 688875
No 12
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=7.5e-31 Score=263.46 Aligned_cols=237 Identities=18% Similarity=0.207 Sum_probs=174.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCC------hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG------IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~------~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 207 (464)
+.||+|+|+.||.+++..+|+.||+|++... .++.+..++++ ...+.|+||+++++.|
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeI----------Hr~L~HpnIV~f~~~F------ 87 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEI----------HRSLKHPNIVQFYHFF------ 87 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHH----------HHhcCCCcEEeeeeEe------
Confidence 6799999999999999779999999998642 22222222222 2233455555554433
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHH
Q 012411 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 208 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~ 286 (464)
++. +..|||.|+|+.++|..+... ....++..+.+.+||..|+.|||+
T Consensus 88 ------------------EDs-------------~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~ 136 (592)
T KOG0575|consen 88 ------------------EDS-------------NNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHS 136 (592)
T ss_pred ------------------ecC-------------CceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 333 455699999999999987552 223456777888999999999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE--EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
.||+|||+|-||+|++++-+|||+|||+|..+.. +.+.++||| |.++++++..-..-+.++|+||+||.+
T Consensus 137 ~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGT--------PNYIAPEVl~k~gHsfEvDiWSlGcvm 208 (592)
T KOG0575|consen 137 LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGT--------PNYIAPEVLNKSGHSFEVDIWSLGCVM 208 (592)
T ss_pred cCceecccchhheeecCcCcEEecccceeeeecCcccccceecCC--------CcccChhHhccCCCCCchhhhhhhhHH
Confidence 9999999999999999999999999999999853 455678887 555555555444457899999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHH
Q 012411 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYF 434 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~ 434 (464)
|-++. +.+|++..++++....|...-+.+|-.+.+....+++++ +.-||.-+++.. .++|+
T Consensus 209 YtLL~--G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~l-------L~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 209 YTLLV--GRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKL-------LRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred Hhhhh--CCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHH-------hcCCcccCCCHHHHhcCHhh
Confidence 99998 568899888888888887766666666666666666666 445555554443 35554
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=248.27 Aligned_cols=228 Identities=19% Similarity=0.178 Sum_probs=160.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+||||+|+.++.+.+|+-+|+|++++..--. ..+.+.++.-..+ +....||.++.+.-.|
T Consensus 31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~-~~e~~~~~~Er~I---L~~v~hPFiv~l~ysF------------ 94 (357)
T KOG0598|consen 31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVE-KKEVRHTKAERNI---LSKIKHPFIVKLIYSF------------ 94 (357)
T ss_pred eeeeccCCceEEEEEEcccCceeehhhhhhhHhhh-hhhHHHHHHHHHH---HHhCCCCcEeeeEEec------------
Confidence 78999999999999999999999999987431110 0111111111111 1112233333322222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
+.....|||+||+.||.|.-.... ....++..+++...|.+||.|||+.||+||
T Consensus 95 -------------------------Qt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyR 149 (357)
T KOG0598|consen 95 -------------------------QTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYR 149 (357)
T ss_pred -------------------------ccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeec
Confidence 223567999999999999766432 234466778888889999999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcC-CHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSET-PEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+||+|||++.+|+++|+|||+++.. ... ...++||| +++||++++.-...+..+|.||+|+.+++|+.+
T Consensus 150 DlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT--------~eYmAPEil~~~gy~~~vDWWsLGillYeML~G 221 (357)
T KOG0598|consen 150 DLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGT--------PEYMAPEILLGKGYDKAVDWWSLGILLYEMLTG 221 (357)
T ss_pred cCCHHHeeecCCCcEEEeccccchhcccCCCccccccCC--------ccccChHHHhcCCCCcccchHhHHHHHHHHhhC
Confidence 99999999999999999999999954 222 22335554 777888877666678999999999999999994
Q ss_pred hccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHHHH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSLTV 412 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l~~ 412 (464)
..|+...+.+.+.+.+...- ...+..++++...+++.++.
T Consensus 222 --~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~ 262 (357)
T KOG0598|consen 222 --KPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLK 262 (357)
T ss_pred --CCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhc
Confidence 47787778777777776543 22333366677777777733
No 14
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3e-30 Score=262.01 Aligned_cols=261 Identities=19% Similarity=0.186 Sum_probs=196.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..+|.||||.|+.|.++.+++.+|||+++++.--. +.|++.++.-.+.+.... .||-++.+...|.
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~~~~EkrI~~la~--~HPFL~~L~~~fQ----------- 439 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVESLMCEKRIFELAN--RHPFLVNLFSCFQ----------- 439 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHHHHHHHHHHHHhc--cCCeEeecccccc-----------
Confidence 78999999999999999999999999998762211 233333333322222111 3444444443332
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
..++.++||||+.||++..+...+.......+.+...+..||+|+|++|||+||
T Consensus 440 --------------------------T~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRD 493 (694)
T KOG0694|consen 440 --------------------------TKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRD 493 (694)
T ss_pred --------------------------cCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeee
Confidence 235678999999999987765555556667778888888999999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|-+|||+|.+|.+||+||||++.- ......++||| |+.+++++..-.-++..+|.|+||..||+|+.
T Consensus 494 lKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGT--------pey~aPEil~e~~Yt~aVDWW~lGVLlyeML~-- 563 (694)
T KOG0694|consen 494 LKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGT--------PEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV-- 563 (694)
T ss_pred cchhheEEcccCcEEecccccccccCCCCCccccccCC--------hhhcChhhhccCcccchhhHHHHHHHHHHHHc--
Confidence 9999999999999999999999974 23344456655 88888888877778999999999999999998
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHH--------hhhHHHHH-----Hh
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA--------ASYPYFAK-----RL 438 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~--------~~~p~~~~-----~l 438 (464)
+..|+.+.+..++.+.|...-..||..++.+.+.+++.++ .-+|+-++-. .++||++. .+
T Consensus 564 Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll-------~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~ 636 (694)
T KOG0694|consen 564 GESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLL-------RKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLL 636 (694)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHh-------ccCcccccCCCCCCchhhhhCCccccCCHHHHh
Confidence 5678888888999999988888899999999999999994 4555555433 26777532 22
Q ss_pred cCCCCHHHHHHHH
Q 012411 439 LTDPNPYLRDALV 451 (464)
Q Consensus 439 ~~~~~p~~r~~~~ 451 (464)
.++..|..+|++.
T Consensus 637 ~r~i~PPf~P~i~ 649 (694)
T KOG0694|consen 637 NRRIKPPFVPTIK 649 (694)
T ss_pred hccCCCCCCcccC
Confidence 3456666666654
No 15
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2e-30 Score=254.67 Aligned_cols=219 Identities=18% Similarity=0.180 Sum_probs=163.6
Q ss_pred hCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCCh-----HHHHHHHHHHHHHHHHHHHhchhcccCCH
Q 012411 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGI-----EEAIGLDFYLIRGVGFLINKYVDIITTDV 194 (464)
Q Consensus 120 lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~-----~~~~~~d~~~l~~~~~~~~~~~~~~~~~i 194 (464)
++....+.|+.+ +.||+|.||+||+|++..+|+.||+|.++-+. ...+.+++.+|+.+ .|+|+
T Consensus 111 w~~r~~~~feki--~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l----------~HpNI 178 (560)
T KOG0600|consen 111 WGPRRADSFEKI--EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL----------DHPNI 178 (560)
T ss_pred ccccchHHHHHH--HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc----------CCCcc
Confidence 444556677777 67999999999999999999999999987543 22344444444443 58887
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh--cCCCHHHH
Q 012411 195 VALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDL 272 (464)
Q Consensus 195 ~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~ 272 (464)
+.+.+- |+...++..|||.||++. +|.-+..... ...+....
T Consensus 179 ikL~ei-----------------------------------vt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc 222 (560)
T KOG0600|consen 179 IKLEEI-----------------------------------VTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKC 222 (560)
T ss_pred cceeeE-----------------------------------EEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHH
Confidence 776542 222346788999999987 6665543332 22445668
Q ss_pred HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 012411 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (464)
Q Consensus 273 ~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (464)
++.|+..+|+|||..||+|||||.+||||+.+|.+||+|||+++.++.+....+++-+.+++++.||.+..+- -++
T Consensus 223 ~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t----~Yg 298 (560)
T KOG0600|consen 223 YMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGAT----SYG 298 (560)
T ss_pred HHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCc----ccc
Confidence 8899999999999999999999999999999999999999999988877766678888889999999874321 247
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Q 012411 353 PDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVL 392 (464)
Q Consensus 353 ~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 392 (464)
+.+|+||.||++.|++.+ ..-+.+.+.-+-+..|.++|
T Consensus 299 ~aVDlWS~GCIl~El~~g--kPI~~G~tEveQl~kIfklc 336 (560)
T KOG0600|consen 299 TAVDLWSVGCILAELFLG--KPILQGRTEVEQLHKIFKLC 336 (560)
T ss_pred cceeehhhhHHHHHHHcC--CCCcCCccHHHHHHHHHHHh
Confidence 899999999999999973 23334433333444555554
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=237.30 Aligned_cols=231 Identities=18% Similarity=0.171 Sum_probs=170.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..+|.||||.||.++.+.+|.-+|+|++... ++--++.+ +.+.+|.
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~-------~vVklKQv-----------------------eH~~nEk---- 95 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ-------KVVKLKQV-----------------------EHTHNEK---- 95 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHH-------HHHHHHHH-----------------------HHHhhHH----
Confidence 7899999999999999999999999998632 11111111 0111111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeecc--CCCCceEEEeeecCcccCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
++..... +|. +-+.++. ..+..++||||++||.|..+.. ..+......+.+..++.+|++|||+.+++
T Consensus 96 ------~vL~~v~-~PF--lv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~ii 166 (355)
T KOG0616|consen 96 ------RVLKAVS-HPF--LVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDII 166 (355)
T ss_pred ------HHHhhcc-Cce--eEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCee
Confidence 1111111 122 1222222 2456789999999999988743 23455677889999999999999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+||+||+|||++.+|.+|++|||.++.++.. ..++|| .|+++++++....-....+|.|+||..++||+.+
T Consensus 167 YRDLKPENiLlD~~G~iKitDFGFAK~v~~r-T~TlCG--------TPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG 237 (355)
T KOG0616|consen 167 YRDLKPENLLLDQNGHIKITDFGFAKRVSGR-TWTLCG--------TPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAG 237 (355)
T ss_pred eccCChHHeeeccCCcEEEEeccceEEecCc-EEEecC--------CccccChHHhhcCCCCcchhHHHHHHHHHHHHcC
Confidence 9999999999999999999999999998876 334555 4888988888777678899999999999999995
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhc
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLAL 418 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~ 418 (464)
+ .|+.+.+--.+-+.|...-..+|..+.+....+++.++..+-..+
T Consensus 238 ~--pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 238 Y--PPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred C--CCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 4 666666655666667666667777777888888888877665544
No 17
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.96 E-value=5.7e-30 Score=253.62 Aligned_cols=248 Identities=17% Similarity=0.242 Sum_probs=185.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.||||.||+|+.+.+++.||+|++.+..+. ..|++.++ +..+....++|+|++++++.|+..
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~--~k~l~~l~---~ev~i~r~lkHpniv~m~esfEt~--------- 73 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN--EKELKNLR---QEVRILRSLKHPNIVEMLESFETS--------- 73 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCc--hHHHHHHH---HHHHHHHhcCCcchhhHHHhhccc---------
Confidence 5699999999999999999999999998654332 23333333 333333445699999998877643
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
++.|+|.||+.| +|..+... ...+++..+.+..++..+|.|+|+.+|+||
T Consensus 74 ----------------------------~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhr 124 (808)
T KOG0597|consen 74 ----------------------------AHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHR 124 (808)
T ss_pred ----------------------------ceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 677899999999 88776543 234566667777888899999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
|+||.|||+..+|.+|++|||+++.++... .+...+.+.|-++++++++-+-.+..+|.||+||.+||++. +
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~--G 196 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNT------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYV--G 196 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCc------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhc--C
Confidence 999999999999999999999999876542 23445667788888888887778889999999999999998 5
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHHHhc
Q 012411 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAKRLL 439 (464)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~~l~ 439 (464)
.+|+-..++.+++..|.+--...|....++|..++.++ +.-||..++.-. .|||++..+.
T Consensus 197 ~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gL-------L~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 197 QPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGL-------LIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred CCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHH-------hhcChhhcccHHHHhcChHHhhhhh
Confidence 56766656555555444332333344444555555555 467888777655 7999887764
No 18
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.9e-28 Score=224.87 Aligned_cols=238 Identities=18% Similarity=0.179 Sum_probs=158.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHH-HHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID-EFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~Eld~~ 212 (464)
+.||.||||.||++....+|..||.|.+.-+.-+. +.-..+...+..+..++|+|++++.. .|.+.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~-----k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~-------- 91 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDA-----KARQDCVKEISLLKQLNHPNIVQYYAHSFIED-------- 91 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccH-----HHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc--------
Confidence 67999999999999999899999999876442221 11111122222333456898888877 33221
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC---CCHHH--HHHHHHHHHHHHHHH-
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG---LKVLD--LVNTGIQCSLRQLLE- 286 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~---~~~~~--~~~~~i~~~l~~lh~- 286 (464)
..-.+||||+|++|+|+++++.-+.. ++... .+..|++.||..+|.
T Consensus 92 ----------------------------~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~ 143 (375)
T KOG0591|consen 92 ----------------------------NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK 143 (375)
T ss_pred ----------------------------chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc
Confidence 01145999999999999976532211 23333 345677789999998
Q ss_pred -CC--cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 287 -YG--YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 287 -~g--i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
.. ++||||||+||+++.+|.+||.|||+++.++.+.. +.+..-+.|.+|.++...-.-.+.++|+||+||.
T Consensus 144 ~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCl 217 (375)
T KOG0591|consen 144 IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCL 217 (375)
T ss_pred ccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHH
Confidence 55 99999999999999999999999999998876532 2222334455555554444445899999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCC-hHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVP-AYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p-~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
++||.. +..|+.+.++-++-..|... .-..+| ..++.-++.++ ..|...||+.++
T Consensus 218 lyEMca--L~~PF~g~n~~~L~~KI~qg---d~~~~p~~~YS~~l~~li---~~ci~vd~~~RP 273 (375)
T KOG0591|consen 218 LYEMCA--LQSPFYGDNLLSLCKKIEQG---DYPPLPDEHYSTDLRELI---NMCIAVDPEQRP 273 (375)
T ss_pred HHHHHh--cCCCcccccHHHHHHHHHcC---CCCCCcHHHhhhHHHHHH---HHHccCCcccCC
Confidence 999998 77888887766655555433 122355 33333333332 234556666665
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.8e-28 Score=237.06 Aligned_cols=215 Identities=18% Similarity=0.244 Sum_probs=158.5
Q ss_pred HhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcc-cCCHHHHHHHHHH
Q 012411 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDII-TTDVVALIDEFAS 203 (464)
Q Consensus 125 ~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 203 (464)
.+.|..+ +.||.|+||.||+|+...+|+.||||..+..... ..|.-.||++..+. +++ |+|++.+.+.+.+
T Consensus 9 m~RY~~i--~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLREvksL~----kln~hpniikL~Evi~d 80 (538)
T KOG0661|consen 9 MDRYTVI--RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLREVKSLR----KLNPHPNIIKLKEVIRD 80 (538)
T ss_pred HHHHHHH--HHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHHHHHHH----hcCCCCcchhhHHHhhc
Confidence 3444445 6799999999999999999999999987654333 34555666665443 344 8888888876654
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHH
Q 012411 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSL 281 (464)
Q Consensus 204 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l 281 (464)
. .+..++||||++- .|.++...+...+. ..+-+..||..+|
T Consensus 81 ~------------------------------------~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL 123 (538)
T KOG0661|consen 81 N------------------------------------DRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGL 123 (538)
T ss_pred c------------------------------------CceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHH
Confidence 3 1356799999975 77777554433333 3455678899999
Q ss_pred HHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 012411 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (464)
Q Consensus 282 ~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~ 361 (464)
+++|++||||||+||+|||+.....|||+|||+|+.+.... -++..+.+.+++.||.+. .-|+++.++|+|++|
T Consensus 124 ~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp--PYTeYVSTRWYRAPEvLL----rs~~Ys~pvD~wA~G 197 (538)
T KOG0661|consen 124 AHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP--PYTEYVSTRWYRAPEVLL----RSGYYSSPVDMWAVG 197 (538)
T ss_pred HHHHhcCcccccCChhheEecccceeEecccccccccccCC--CcchhhhcccccchHHhh----hccccCCchHHHHHH
Confidence 99999999999999999999988899999999999986543 245566677888888764 456779999999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Q 012411 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVL 392 (464)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 392 (464)
|.+.|++. +..-+.+.+.-+-++.|..++
T Consensus 198 cI~aEl~s--LrPLFPG~sE~Dqi~KIc~VL 226 (538)
T KOG0661|consen 198 CIMAELYS--LRPLFPGASEIDQIYKICEVL 226 (538)
T ss_pred HHHHHHHH--hcccCCCCcHHHHHHHHHHHh
Confidence 99999987 334344444433344444443
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.4e-29 Score=248.62 Aligned_cols=249 Identities=16% Similarity=0.231 Sum_probs=168.3
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.||+|+||.|+.|++..+|+.||||++...... ... ....+.+.+|+
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~-----------------------~~~-----~~~~~~i~rEi--- 70 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVS-----------------------SKS-----QKLDELIKREI--- 70 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhccc-----------------------ccc-----cccchhhHHHH---
Confidence 37899999999999999989999999987543000 000 00001111222
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.++.++. .+++|.-..-+....+..++|||||.||.|.+.... ........+.+..|+..|++|||+.||+|
T Consensus 71 ---~~~~~~~----~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~H 143 (370)
T KOG0583|consen 71 ---SILRRLR----SHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVH 143 (370)
T ss_pred ---HHHHHhc----cCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEee
Confidence 2222222 233333333333445668999999999999987654 23334566778899999999999999999
Q ss_pred CCCCCcceEEccC-CcEEEEecCCCCcCC--HHHHHHHHHHHHHHHhcCHHHHHHHHHHc-C-CCCCCCCcchHHHHHHH
Q 012411 292 ADPHPGNLLATPE-GKLAFLDFGMMSETP--EEARFAIIGHVVHMVNRDYEAMARDYYAL-D-FLSPDVDVTPIVPALRN 366 (464)
Q Consensus 292 ~Dlkp~Nili~~~-g~i~l~DFGl~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-~~~~~~D~~sl~~~l~~ 366 (464)
||+||+|||++.+ +++||+|||++.... ...-.+.||+ +.+++++++.. + +.+.++|+||+|..++.
T Consensus 144 RDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGs--------p~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ 215 (370)
T KOG0583|consen 144 RDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGS--------PAYAAPEVLSGKGTYSGKAADVWSLGVILYV 215 (370)
T ss_pred CCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCC--------cccCCHHHhCCCCCcCCchhhhhhhHHHHHH
Confidence 9999999999999 999999999999873 2233334443 44445555443 4 66789999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCC-ChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHH
Q 012411 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNV-PAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAK 436 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~ 436 (464)
|+.+. .|+++.+...+...+....+.+|..+ .+++..+++.+ +..||.-|+... .+||+..
T Consensus 216 ml~G~--~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~m-------L~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 216 LLCGR--LPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIEKM-------LVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHhCC--CCCCCccHHHHHHHHhcCCccCCCCcCCHHHHHHHHHH-------cCCCcccCCCHHHHhhChhhcc
Confidence 99954 56766665555655555444555555 55666666666 566776555443 6777654
No 21
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.2e-28 Score=248.80 Aligned_cols=241 Identities=18% Similarity=0.222 Sum_probs=189.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCC------hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG------IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~------~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 207 (464)
+-+|.|+-|.|-.|++..||+.+|||++... ....+..++.+|+.+. |+|+..+++.++
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~----------HpnVl~LydVwe----- 82 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE----------HPNVLRLYDVWE----- 82 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc----------CCCeeeeeeeec-----
Confidence 6799999999999999999999999998644 1234556666666553 666666665433
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH
Q 012411 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 208 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~ 286 (464)
-....|||.||++||.|.++...+ ......+....+||..++.|||.
T Consensus 83 --------------------------------~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~ 130 (786)
T KOG0588|consen 83 --------------------------------NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHA 130 (786)
T ss_pred --------------------------------cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 346778999999999999975432 22234455667889999999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcC-CHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSET-PEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPAL 364 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~D~~sl~~~l 364 (464)
.+|+|||+||+|+|++..++|||+|||||..- +...-++.|| .|.++++++... -|-+.+.|+|++|.++
T Consensus 131 ~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCG--------SPHYA~PEIV~G~pYdG~~sDVWSCGVIL 202 (786)
T KOG0588|consen 131 FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCG--------SPHYAAPEIVSGRPYDGRPSDVWSCGVIL 202 (786)
T ss_pred hcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCC--------CcccCCchhhcCCCCCCCccccchhHHHH
Confidence 99999999999999999999999999999864 3333344444 455555555422 2557789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHHHh
Q 012411 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAKRL 438 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~~l 438 (464)
+.+++ ...||++.+...++..+....+.+|-.+|++...|++.| +..||.-++.-. -|||+...-
T Consensus 203 fALLt--G~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~m-------l~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 203 FALLT--GKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRM-------LDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred HHHHh--CCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHH-------hccCccccccHHHHhhCchhhcCC
Confidence 99999 457888999999999999999999999999999999999 668998888765 688876543
No 22
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.95 E-value=2.2e-27 Score=235.18 Aligned_cols=211 Identities=16% Similarity=0.220 Sum_probs=146.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||.|+||+||.|+-+.||..+|+|++++. ++--+..+ +.+..|-|.+.
T Consensus 147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M~~~~Qv-----------------------~hV~aERdiL~ 196 (550)
T KOG0605|consen 147 KVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EMLKKNQV-----------------------EHVRAERDILA 196 (550)
T ss_pred eeeccccceeEEEEEEccCCcEEeeecccHH-------HHHhhhhH-----------------------HHHHHHHHHhh
Confidence 8999999999999999999999999999744 11111111 11223333332
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCC--CCceEEEeeecCcccCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
| .+.++ +.+.|..+. ...||||||++||++..++. ......+..+.+......|+.-||+.|++
T Consensus 197 ~-----------~ds~~--vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyI 263 (550)
T KOG0605|consen 197 E-----------VDSPW--VVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYI 263 (550)
T ss_pred h-----------cCCCc--EEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcc
Confidence 2 12233 345555443 45689999999999877643 23344567778888888899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH----------------------------------H-------HH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI----------------------------------I-------GH 329 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~----------------------------------~-------~~ 329 (464)
||||||+|+||+..|++||.|||++.-+....+... . ..
T Consensus 264 HRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~ 343 (550)
T KOG0605|consen 264 HRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQ 343 (550)
T ss_pred cccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhh
Confidence 999999999999999999999999865432211110 0 01
Q ss_pred HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Q 012411 330 VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLG 389 (464)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 389 (464)
+.+...+.|+++|++++.---.+..+|.||+||+++|++.+| +|+...+..+....|.
T Consensus 344 ~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGy--PPF~s~tp~~T~rkI~ 401 (550)
T KOG0605|consen 344 LAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGY--PPFCSETPQETYRKIV 401 (550)
T ss_pred hhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCC--CCCCCCCHHHHHHHHH
Confidence 111234778888887764334578899999999999999965 6777766666555553
No 23
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-28 Score=229.96 Aligned_cols=196 Identities=19% Similarity=0.177 Sum_probs=139.6
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+|||.|++|.|..|.++.+|+.||||.+.......+ .-.+.+|++. .+..+.|.|++.+.+.+.
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~-~akRtlRElk----lLr~~~HeNIi~l~di~~---------- 91 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQI-DAKRTLRELK----LLRHLRHENIIGLLDIFR---------- 91 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchH-HHHHHHHHHH----HHHHhcCCCcceEEeecc----------
Confidence 4899999999999999999999999998752222211 0011111111 111223555555554332
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|....+ -+..|+|+|++ +.+|..+...+. ...+-.+....|+..|++|+|+.|++|
T Consensus 92 ---------------------p~~~~~-f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViH 148 (359)
T KOG0660|consen 92 ---------------------PPSRDK-FNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIH 148 (359)
T ss_pred ---------------------cccccc-cceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccc
Confidence 211111 14568999999 447777755443 444566788899999999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||+||+|++++.+..+|++|||+++..++... ..+++.+.+.++++||.+. ...-.+..+|+||+||++.||+++
T Consensus 149 RDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll----~~~~Yt~aiDiWSvGCI~AEmL~g 224 (359)
T KOG0660|consen 149 RDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLL----NSSEYTKAIDIWSVGCILAEMLTG 224 (359)
T ss_pred cccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHh----ccccccchhhhhhhhHHHHHHHcC
Confidence 99999999999999999999999999864322 2346666677889998873 333458899999999999999984
No 24
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.95 E-value=3.8e-27 Score=214.84 Aligned_cols=189 Identities=23% Similarity=0.274 Sum_probs=136.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|+|.||.||+|++..+|+.||||.++.+-.+. .-+...+|++..+. ...|+|++++++.|-
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lq----el~h~nIi~LiD~F~----------- 71 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQ----ELKHPNIIELIDVFP----------- 71 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHH----HccCcchhhhhhhcc-----------
Confidence 67999999999999999999999999998662221 12233333333221 223666666666543
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi~H 291 (464)
+. +...||.||++. +|..+++.+..-+.+.. .+..++..|++|||++.|+|
T Consensus 72 -------------~~-------------~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlH 124 (318)
T KOG0659|consen 72 -------------HK-------------SNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILH 124 (318)
T ss_pred -------------CC-------------CceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 22 445599999986 67766554444444443 45566777999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||+||.|+|++++|.+||+|||+++.+.+..+.. ...+.+.+++.||.+-.. -.++..+|+||.||.+.|++-+
T Consensus 125 RDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~-~~~V~TRWYRAPELLfGs----r~Yg~~VDmWavGCI~AELllr 198 (318)
T KOG0659|consen 125 RDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ-THQVVTRWYRAPELLFGS----RQYGTGVDMWAVGCIFAELLLR 198 (318)
T ss_pred ccCCccceEEcCCCcEEeecccchhccCCCCccc-ccceeeeeccChHHhccc----hhcCCcchhhhHHHHHHHHHcc
Confidence 9999999999999999999999999886554322 222566788888866221 1237889999999999999863
No 25
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5.2e-29 Score=236.88 Aligned_cols=188 Identities=21% Similarity=0.243 Sum_probs=138.2
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.+|+||||.||+|....++++||||..-++.+- -..++.+|+.+ .|+|++.+.-.|...... |
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-knrEl~im~~l----------~HpNIV~L~~~f~~~~~~--d-- 93 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-KNRELQIMRKL----------DHPNIVRLLYFFSSSTES--D-- 93 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-CcHHHHHHHhc----------CCcCeeeEEEEEEecCCC--c--
Confidence 47899999999999999989999999998766442 24566666632 478877776544322110 0
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-----HhcCCCHHHHHHHHHHHHHHHHHHC
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-----ESQGLKVLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (464)
+ --..|||||++- +|.+.... .....-..+++..|+..|+.|||+.
T Consensus 94 ----------------------~------~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~ 144 (364)
T KOG0658|consen 94 ----------------------E------VYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH 144 (364)
T ss_pred ----------------------h------hHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc
Confidence 0 012499999976 77765442 1222334578899999999999999
Q ss_pred CcccCCCCCcceEEccC-CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~-g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
||+||||||.|+|+|++ |.+||+|||.|+.+...... .....+..++.||.+.... .++..+|+||.||.+.|
T Consensus 145 ~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn--iSYicSRyYRaPELifga~----~Yt~~IDiWSaGCV~aE 218 (364)
T KOG0658|consen 145 GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN--ISYICSRYYRAPELIFGAT----EYTTSIDIWSAGCVMAE 218 (364)
T ss_pred CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc--eeEEEeccccCHHHHcCcc----ccCceeEEhhhhHHHHH
Confidence 99999999999999976 89999999999998665432 2233356788888773321 24789999999999999
Q ss_pred HHHH
Q 012411 367 FFDD 370 (464)
Q Consensus 367 ~~~~ 370 (464)
++.+
T Consensus 219 Ll~g 222 (364)
T KOG0658|consen 219 LLKG 222 (364)
T ss_pred HhcC
Confidence 9973
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.9e-27 Score=234.30 Aligned_cols=260 Identities=20% Similarity=0.250 Sum_probs=179.4
Q ss_pred HHHHHHHHHHh-CCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCC---hHHHHHHHHHHHHHHHHHHHh
Q 012411 110 AEAFSCIEREL-GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG---IEEAIGLDFYLIRGVGFLINK 185 (464)
Q Consensus 110 ~~~~~~i~~~l-g~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~---~~~~~~~d~~~l~~~~~~~~~ 185 (464)
+++...+.... ..++...|..+ +.||+|+-|.||.|+...+++.||||...-. .++.+-.++.+|+
T Consensus 256 ~~~~~~l~~v~~~~dP~~~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~-------- 325 (550)
T KOG0578|consen 256 EEILAKLKRVVSQGDPRSKYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMR-------- 325 (550)
T ss_pred HHHHHHhheeccCCChhhhhcch--hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHH--------
Confidence 34444443322 23455666666 6799999999999999989999999987422 2222223333333
Q ss_pred chhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc
Q 012411 186 YVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ 265 (464)
Q Consensus 186 ~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~ 265 (464)
...|+|++.+++.+.. ....|.||||++||+|.|+......
T Consensus 326 --~~~H~NiVnfl~Sylv-------------------------------------~deLWVVMEym~ggsLTDvVt~~~~ 366 (550)
T KOG0578|consen 326 --DLHHPNIVNFLDSYLV-------------------------------------GDELWVVMEYMEGGSLTDVVTKTRM 366 (550)
T ss_pred --hccchHHHHHHHHhcc-------------------------------------cceeEEEEeecCCCchhhhhhcccc
Confidence 3346666666665331 2677999999999999998554433
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHH
Q 012411 266 GLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMAR 343 (464)
Q Consensus 266 ~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 343 (464)
.+.....+.+.+..||++||..||+|||||..|||++.+|.+||+|||++.++.++. |.++.|+ |.+|++
T Consensus 367 ~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGT--------PYWMAP 438 (550)
T KOG0578|consen 367 TEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGT--------PYWMAP 438 (550)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCC--------CCccch
Confidence 333444556777789999999999999999999999999999999999999997764 4445544 777777
Q ss_pred HHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHh--hCCCCCChHHHHHHHHHHHHHHhhcccC
Q 012411 344 DYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLY--QYPFNVPAYYALILRSLTVLEGLALYAD 421 (464)
Q Consensus 344 ~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~p~~~~~l~r~l~~leg~~~~ld 421 (464)
+++....+++++||||||..+.||++ .+.|+-..+- +.++.-+.. .-.+..|..+...+|.++. -|+..|
T Consensus 439 EVvtrk~YG~KVDIWSLGIMaIEMve--GEPPYlnE~P---lrAlyLIa~ng~P~lk~~~klS~~~kdFL~---~cL~~d 510 (550)
T KOG0578|consen 439 EVVTRKPYGPKVDIWSLGIMAIEMVE--GEPPYLNENP---LRALYLIATNGTPKLKNPEKLSPELKDFLD---RCLVVD 510 (550)
T ss_pred hhhhhcccCccccchhhhhHHHHHhc--CCCCccCCCh---HHHHHHHhhcCCCCcCCccccCHHHHHHHH---HHhhcc
Confidence 77777777999999999999999998 3444432221 112221211 2334556666666666643 356778
Q ss_pred CCCChHHh---hhHHH
Q 012411 422 PNFKVLAA---SYPYF 434 (464)
Q Consensus 422 P~~~~~~~---~~p~~ 434 (464)
|+.+..+. .|||+
T Consensus 511 v~~RasA~eLL~HpFl 526 (550)
T KOG0578|consen 511 VEQRASAKELLEHPFL 526 (550)
T ss_pred hhcCCCHHHHhcChhh
Confidence 88777664 67887
No 27
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=1.5e-27 Score=228.14 Aligned_cols=228 Identities=17% Similarity=0.189 Sum_probs=177.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|+|.+|.|-+|..+..|+.||||.++.+.-+ |-.-|-.+.+.++.+..++|++|..+++.|+..
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk----deqDlvhIRREIeIMSsLNHPhII~IyEVFENk--------- 125 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK----DEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK--------- 125 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcc----cHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC---------
Confidence 6799999999999999889999999998765322 222333444455556667899988888877642
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
...+|||||..||.|.|+.... .......+-+.+||.+++.|+|.++++||
T Consensus 126 ----------------------------dKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHR 177 (668)
T KOG0611|consen 126 ----------------------------DKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHR 177 (668)
T ss_pred ----------------------------ceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceec
Confidence 5678999999999999986532 33455667788999999999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|+|-+|||++.++++||+|||++..+... .-+++||..+ +..||.+.. .-|-++++|-|++|..+|-++-
T Consensus 178 DLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPL---YASPEIvNG----~PY~GPEVDsWsLGvLLYtLVy-- 248 (668)
T KOG0611|consen 178 DLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPL---YASPEIVNG----TPYKGPEVDSWSLGVLLYTLVY-- 248 (668)
T ss_pred ccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcc---cCCccccCC----CCCCCCccchhhHHHHHHHHhh--
Confidence 99999999999999999999999877543 4455555433 233433321 1245899999999999998886
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV 412 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~ 412 (464)
...|+++.+++.++.+|....|.-|. -|.+...++|.|+.
T Consensus 249 GtMPFDG~Dhk~lvrQIs~GaYrEP~-~PSdA~gLIRwmLm 288 (668)
T KOG0611|consen 249 GTMPFDGRDHKRLVRQISRGAYREPE-TPSDASGLIRWMLM 288 (668)
T ss_pred cccccCCchHHHHHHHhhcccccCCC-CCchHHHHHHHHHh
Confidence 56799999999999999888776554 58888999999854
No 28
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.94 E-value=7.4e-28 Score=225.69 Aligned_cols=194 Identities=22% Similarity=0.275 Sum_probs=140.3
Q ss_pred hcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHH
Q 012411 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (464)
Q Consensus 128 f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 207 (464)
|+.. ..|++|+||.||+|+++.|++.||+|.++...... .--+..||.+..++ ...|+||+++-+.
T Consensus 78 fe~l--nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-GFPItsLREIniLl----~~~H~NIV~vkEV------- 143 (419)
T KOG0663|consen 78 FEKL--NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-GFPITSLREINILL----KARHPNIVEVKEV------- 143 (419)
T ss_pred HHHH--hhcccCcceeEEEeccCCcceeEEeeecccccccC-CCcchhHHHHHHHH----hcCCCCeeeeEEE-------
Confidence 4444 57999999999999999999999999998764321 11222333333322 2235555443221
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC--CCHHHHHHHHHHHHHHHHH
Q 012411 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNTGIQCSLRQLL 285 (464)
Q Consensus 208 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~~i~~~l~~lh 285 (464)
|+...-...|+|||||+. +|..+...-.+. ....+.+..|+..|++|||
T Consensus 144 ----------------------------VvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH 194 (419)
T KOG0663|consen 144 ----------------------------VVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH 194 (419)
T ss_pred ----------------------------EeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh
Confidence 112222457899999987 555543322233 3355677888999999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
.+.|+|||+||+|+|+++.|.+|++|||+++.+.... ..++..+.+++++.||.+.. .-.++..+|+||+||++.
T Consensus 195 ~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~-k~~T~lVVTLWYRaPELLLG----~~tyst~iDMWSvGCI~a 269 (419)
T KOG0663|consen 195 DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL-KPYTPLVVTLWYRAPELLLG----AKTYSTAVDMWSVGCIFA 269 (419)
T ss_pred hceeEecccchhheeeccCCcEEecccchhhhhcCCc-ccCcceEEEeeecCHHHhcC----CcccCcchhhhhHHHHHH
Confidence 9999999999999999999999999999999986552 34566777889999997732 113488999999999999
Q ss_pred HHHH
Q 012411 366 NFFD 369 (464)
Q Consensus 366 ~~~~ 369 (464)
|++.
T Consensus 270 E~l~ 273 (419)
T KOG0663|consen 270 ELLT 273 (419)
T ss_pred HHHh
Confidence 9997
No 29
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.94 E-value=5.2e-27 Score=223.41 Aligned_cols=189 Identities=24% Similarity=0.340 Sum_probs=132.8
Q ss_pred hhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHHhchhcccCC-HHHHHHH
Q 012411 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTD-VVALIDE 200 (464)
Q Consensus 127 ~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~d~~~l~~~~~~~~~~~~~~~~~-i~~~~~~ 200 (464)
.|..+ +.+|+|++|.||+|+.+.+|+.||+|+++-...+ ....++.+++.+ .|++ ++.+.+
T Consensus 12 ~~~~~--eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L----------~~~~~iv~L~d- 78 (323)
T KOG0594|consen 12 DYEKV--EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL----------SHANHIVRLHD- 78 (323)
T ss_pred HHHHH--HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh----------CCCcceEEEEe-
Confidence 34445 4599999999999999999999999999744221 112222222222 1322 333222
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCC-----CCceEEEeeecCcccCcHHHHHh---cCCCH--H
Q 012411 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT-----SGKVLTMEWVEGVKLNEQVAIES---QGLKV--L 270 (464)
Q Consensus 201 ~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LvmE~~~G~~L~~~~~~~~---~~~~~--~ 270 (464)
+....+ +..++|+||++- +|.++..... .+.+. .
T Consensus 79 -----------------------------------v~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~i 122 (323)
T KOG0594|consen 79 -----------------------------------VIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLI 122 (323)
T ss_pred -----------------------------------eeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHH
Confidence 222222 256799999976 6666543322 34553 5
Q ss_pred HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 012411 271 DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350 (464)
Q Consensus 271 ~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (464)
+.+..|+..|+.|||++||+|||+||+||||+++|.+||+|||+++...-..+ +++.-+.++.++.||.+... -.
T Consensus 123 k~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~-~yt~evvTlWYRaPEvLlGs----~~ 197 (323)
T KOG0594|consen 123 KSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR-TYTPEVVTLWYRAPEVLLGS----TS 197 (323)
T ss_pred HHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc-cccccEEEeeccCHHHhcCC----Cc
Confidence 67788999999999999999999999999999999999999999986543322 23444556678888875322 13
Q ss_pred CCCCCCcchHHHHHHHHHH
Q 012411 351 LSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 351 ~~~~~D~~sl~~~l~~~~~ 369 (464)
+++.+|+||+||++.||++
T Consensus 198 Ys~~vDiWs~GcIfaEm~~ 216 (323)
T KOG0594|consen 198 YSTSVDIWSLGCIFAEMFT 216 (323)
T ss_pred CCCCcchHhHHHHHHHHHh
Confidence 5889999999999999998
No 30
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.94 E-value=8.6e-26 Score=220.56 Aligned_cols=234 Identities=16% Similarity=0.126 Sum_probs=154.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|....+|+.||||+........ ......+......+....|++++.+.+.+..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---------- 72 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----LKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD---------- 72 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----hHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc----------
Confidence 67999999999999998889999999986431111 1111112222222233456776666543221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
....++||||++|++|.++..... ........+..++..++.|+|+.|++|+
T Consensus 73 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 125 (291)
T cd05612 73 ---------------------------QRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYR 125 (291)
T ss_pred ---------------------------CCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 244579999999999987644221 1222334455778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
||||+||+++.+|.++|+|||++..+..... ..+ +.+..++++.......+.++|+||+|+.+++++++
T Consensus 126 dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~-~~~--------gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g-- 194 (291)
T cd05612 126 DLKPENILLDKEGHIKLTDFGFAKKLRDRTW-TLC--------GTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG-- 194 (291)
T ss_pred CCCHHHeEECCCCCEEEEecCcchhccCCcc-ccc--------CChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhC--
Confidence 9999999999999999999999887643321 112 22334444444444457789999999999999984
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
..|+...+...+...+.......+..+++.+..+++.+ ...||.-|+
T Consensus 195 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~-------l~~dp~~R~ 241 (291)
T cd05612 195 YPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKL-------LVVDRTRRL 241 (291)
T ss_pred CCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHH-------cCCCHHHcc
Confidence 45565555444444443332334444566666666666 567777666
No 31
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.93 E-value=1.7e-26 Score=193.68 Aligned_cols=119 Identities=41% Similarity=0.715 Sum_probs=114.7
Q ss_pred HHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHH
Q 012411 118 RELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVAL 197 (464)
Q Consensus 118 ~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~ 197 (464)
++||.+++++|++||++|||+||+||||+|+++ +|++||||+++|++.+.+..|+.+++.++.+++++......++..+
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~-~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~ 79 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLK-DGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEI 79 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeec-ccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHH
Confidence 368999999999999999999999999999998 8999999999999999999999999999999999887668899999
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceee
Q 012411 198 IDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIF 237 (464)
Q Consensus 198 ~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~ 237 (464)
++++.+.+.+|+||..|++|+.+|+++|.+.+.++||+||
T Consensus 80 ~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 80 VDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 9999999999999999999999999999999999999987
No 32
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=3.1e-27 Score=228.24 Aligned_cols=245 Identities=17% Similarity=0.201 Sum_probs=155.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCCh---HHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGI---EEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~---~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+-||+|+||.||.|.+..+|+..|||...-.. .+.+..++.+|. .+.|++|++.....
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~----------~l~~p~IV~~~G~~--------- 83 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILS----------RLNHPNIVQYYGSS--------- 83 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHH----------hCCCCCEEeeCCcc---------
Confidence 67999999999999999789999999875331 011111111111 11233333322210
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCC-CceEEEeeecCcccCcHHHHHh--cCCCHHHHHHHHHHHHHHHHHHC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTS-GKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~ 287 (464)
....+ ..++.|||++||+|.+...... .+.+..+.+..++..+|.|||++
T Consensus 84 ---------------------------~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 84 ---------------------------SSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred ---------------------------ccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 00011 4579999999999999855433 34556667788999999999999
Q ss_pred CcccCCCCCcceEEcc-CCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCCCCcchHHHHHH
Q 012411 288 GYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF-LSPDVDVTPIVPALR 365 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~-~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~D~~sl~~~l~ 365 (464)
||+||||||+|||+++ +|.+||+|||+++........ ........+.+.+++++.+..|. ..+++|+||+||++-
T Consensus 137 g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVv 213 (313)
T KOG0198|consen 137 GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVV 213 (313)
T ss_pred CEeccCcccceEEEeCCCCeEEeccCcccccccccccc---ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEE
Confidence 9999999999999999 799999999999987631000 00001123345556666655453 345999999999999
Q ss_pred HHHHHhccCCCCcC-cHHHHHHHHHHHHhhC-CCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHH
Q 012411 366 NFFDDALNSSVSEL-NFKTIVDGLGAVLYQY-PFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFA 435 (464)
Q Consensus 366 ~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~-~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~ 435 (464)
||+++ ..|+.+. .. ...+..+.... ...+|+.+....+.++. .|...||..+.++. .+||+.
T Consensus 214 EM~Tg--~~PW~~~~~~---~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~---~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 214 EMLTG--KPPWSEFFEE---AEALLLIGREDSLPEIPDSLSDEAKDFLR---KCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred eccCC--CCcchhhcch---HHHHHHHhccCCCCCCCcccCHHHHHHHH---HHhhcCcccCcCHHHHhhChhhh
Confidence 99995 5666653 22 22222222221 22566665555555533 45666776666554 455553
No 33
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.93 E-value=2.3e-26 Score=228.13 Aligned_cols=238 Identities=17% Similarity=0.138 Sum_probs=156.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||||+.++..... ..+...+......+.......|+|++.+.+
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~-------------- 69 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVESLMCEKRIFETANSERHPFLVNLFA-------------- 69 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHHhccccCCCChhceee--------------
Confidence 67999999999999998899999999987432110 011111111111111112223343333322
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
+.......++||||++|++|................+..++..++.|+|+.|++|||
T Consensus 70 -----------------------~~~~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrd 126 (324)
T cd05589 70 -----------------------CFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRD 126 (324)
T ss_pred -----------------------EEEcCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence 112235678999999999987664322222333444567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||+||+++.+|.++|+|||++...... .....+ +.+..++++.+..+..+.++|+|++|+.++++++
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-- 196 (324)
T cd05589 127 LKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFC--------GTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV-- 196 (324)
T ss_pred CCHHHeEECCCCcEEeCcccCCccCCCCCCcccccc--------cCccccCHhHhcCCCCCcccchhhHHHHHHHHHh--
Confidence 9999999999999999999998754221 111122 2334444555544556788999999999999998
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
...|+...+..++...+.......+..+|+.+..+++.+ ...||+.|+
T Consensus 197 G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~-------L~~dP~~R~ 244 (324)
T cd05589 197 GESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRL-------LRRNPERRL 244 (324)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-------hhcCHhHcC
Confidence 445666666555555554443445666788888777777 556777765
No 34
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.2e-27 Score=227.33 Aligned_cols=252 Identities=16% Similarity=0.193 Sum_probs=170.1
Q ss_pred CCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHH
Q 012411 122 LTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (464)
Q Consensus 122 ~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (464)
.++...|..+ +.||.|+||.||+|.+..+++.||+|++.-...+...
T Consensus 9 ~~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deI------------------------------- 55 (467)
T KOG0201|consen 9 IDPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEI------------------------------- 55 (467)
T ss_pred CCcccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhh-------------------------------
Confidence 3456667777 6799999999999999999999999998633211100
Q ss_pred HHHHHHHhcHHHHHH--HHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc-CCCHHHHHHHHHH
Q 012411 202 ASRVYQELNYVQEGQ--NARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKVLDLVNTGIQ 278 (464)
Q Consensus 202 ~~~~~~Eld~~~Ea~--n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~~~~~~~~i~ 278 (464)
+.+.+|+.++.+.+ |+.+++..|- ..+..+++||||.||++.+....... .......+.+.+.
T Consensus 56 -ediqqei~~Ls~~~~~~it~yygsyl-------------~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l 121 (467)
T KOG0201|consen 56 -EDIQQEISVLSQCDSPNITEYYGSYL-------------KGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVL 121 (467)
T ss_pred -HHHHHHHHHHHhcCcchHHhhhhhee-------------ecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHH
Confidence 11233333333222 2222222210 13567899999999999987554332 2333345567778
Q ss_pred HHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 012411 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (464)
Q Consensus 279 ~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (464)
.++.|+|.++.+|||||+.||++..+|.++|+|||.+.+++... +.++.|+ |.+|++++.....++.++|
T Consensus 122 ~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGT--------PfwMAPEVI~~~~Y~~KAD 193 (467)
T KOG0201|consen 122 KGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGT--------PFWMAPEVIKQSGYDTKAD 193 (467)
T ss_pred HHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccccccc--------ccccchhhhccccccchhh
Confidence 89999999999999999999999999999999999999987653 3445554 5566666666545588999
Q ss_pred cchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHH
Q 012411 357 VTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPY 433 (464)
Q Consensus 357 ~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~ 433 (464)
+||||.+.++|.. +.+|..+..--. -+.-+....|..+...+...+|-+ -..|+..||++|.++. .++|
T Consensus 194 IWSLGITaiEla~--GePP~s~~hPmr---vlflIpk~~PP~L~~~~S~~~kEF---V~~CL~k~P~~RpsA~~LLKh~F 265 (467)
T KOG0201|consen 194 IWSLGITAIELAK--GEPPHSKLHPMR---VLFLIPKSAPPRLDGDFSPPFKEF---VEACLDKNPEFRPSAKELLKHKF 265 (467)
T ss_pred hhhhhHHHHHHhc--CCCCCcccCcce---EEEeccCCCCCccccccCHHHHHH---HHHHhhcCcccCcCHHHHhhhHH
Confidence 9999999999998 566766654311 111122233333334455555555 3356788899888775 5666
Q ss_pred HHH
Q 012411 434 FAK 436 (464)
Q Consensus 434 ~~~ 436 (464)
+++
T Consensus 266 Ik~ 268 (467)
T KOG0201|consen 266 IKR 268 (467)
T ss_pred HHh
Confidence 654
No 35
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.93 E-value=3.8e-26 Score=226.24 Aligned_cols=237 Identities=19% Similarity=0.178 Sum_probs=150.2
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|+||+||+|+++.+|+.||||++++..... ..+.. ....|....
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~-----------------------------~~~~e~~~l-- 49 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ-DDDVE-----------------------------CTMTEKRIL-- 49 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh-ccHHH-----------------------------HHHHHHHHH--
Confidence 5899999999999998889999999987432110 00000 000111100
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
. ...+++++.-..-+.......++||||++|++|.+..... .........+..++..++.|+|+.|++|||
T Consensus 50 ----~----~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~d 121 (320)
T cd05590 50 ----S----LARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRD 121 (320)
T ss_pred ----H----hccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence 0 0011122111111112235568999999999997754322 122223344567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||+|||++.+|.++|+|||++...... ..... .+.+.+++++.......+.++|+|++|+.++++++
T Consensus 122 lkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~--------~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-- 191 (320)
T cd05590 122 LKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTF--------CGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLC-- 191 (320)
T ss_pred CCHHHeEECCCCcEEEeeCCCCeecCcCCCccccc--------ccCccccCHHHHcCCCCCCccchhhhHHHHHHHhh--
Confidence 9999999999999999999998754221 11111 23344445555544556788999999999999998
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHH
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA 428 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~ 428 (464)
...|+...+..++...+.......+..+++.+..+++.+ ...||.-|+..
T Consensus 192 g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~-------L~~dP~~R~~~ 241 (320)
T cd05590 192 GHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAF-------MTKNPTMRLGS 241 (320)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH-------cccCHHHCCCC
Confidence 445666666555555444322334445677777777776 55677776653
No 36
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.93 E-value=4.5e-26 Score=226.62 Aligned_cols=235 Identities=17% Similarity=0.144 Sum_probs=152.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|+++.+|+.||||+.+..... +.... +.+ ..
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~--------------------------~~~------~~ 67 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMKQV--------------------------QHV------AQ 67 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhhH--------------------------HHH------HH
Confidence 7899999999999999988999999998632100 00000 011 11
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|...+.++ +++++.-..-+.......+++|||++|++|.+..... .........+..++..++.|+|+.|++||
T Consensus 68 E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~ 142 (329)
T PTZ00263 68 EKSILMEL-----SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYR 142 (329)
T ss_pred HHHHHHhC-----CCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 22222211 1122111111122345678999999999998764322 11223344556778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
||||+|||++.+|.++|+|||++..+..... .. .+.+.+++++.+.....+.++|+|++|+.+++++++
T Consensus 143 dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~--------~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg-- 211 (329)
T PTZ00263 143 DLKPENLLLDNKGHVKVTDFGFAKKVPDRTF-TL--------CGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG-- 211 (329)
T ss_pred CCCHHHEEECCCCCEEEeeccCceEcCCCcc-ee--------cCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcC--
Confidence 9999999999999999999999987754321 11 234455555655555567889999999999999984
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
..|+.+.+.......+.......+..+++.+..+++.+ ...||.-|+.
T Consensus 212 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~-------L~~dP~~R~~ 259 (329)
T PTZ00263 212 YPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGL-------LQTDHTKRLG 259 (329)
T ss_pred CCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHH-------hhcCHHHcCC
Confidence 45555544434444333222233444566666666666 6677877764
No 37
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.93 E-value=5e-26 Score=225.53 Aligned_cols=239 Identities=15% Similarity=0.186 Sum_probs=171.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|.|+||.++..+++.++..+|+|.++-.....-..+ ..++.+ ..+....|||++++.+.|...
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~-~A~~E~----~lis~~~hP~iv~y~ds~~~~--------- 75 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERR-SAIQEM----DLLSKLLHPNIVEYKDSFEED--------- 75 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhH-HHHHHH----HHHHhccCCCeeeeccchhcC---------
Confidence 679999999999999998999999999864321111111 111111 111223477777777655432
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCC-ceEEEeeecCcccCcHHHHHh-cCCCHHHHHH--HHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSG-KVLTMEWVEGVKLNEQVAIES-QGLKVLDLVN--TGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~-~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~--~~i~~~l~~lh~~gi 289 (464)
+. .+|||+||+||++.+.+...+ .-+...++.. .|+..++.|||+.+|
T Consensus 76 ----------------------------~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~i 127 (426)
T KOG0589|consen 76 ----------------------------GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRV 127 (426)
T ss_pred ----------------------------CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhh
Confidence 44 689999999999998765444 3345555444 556669999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|||+|+.||+++.++.|+|.|||+++.+.++.. ++ ...-++|.++.+++.+---++.+.|+|++||+++|+.+
T Consensus 128 LHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~--~a----~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~ 201 (426)
T KOG0589|consen 128 LHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS--LA----STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCT 201 (426)
T ss_pred hcccchhhhhhccccCceeecchhhhhhcCCchh--hh----heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHh
Confidence 9999999999999999999999999999977641 11 22334455555555544445789999999999999999
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA 429 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~ 429 (464)
...++...+...++..+....+ ..+.....++..+++++ +..+|..++.+.
T Consensus 202 --lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~-------l~~~P~~RPsa~ 253 (426)
T KOG0589|consen 202 --LKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSM-------LRKNPEHRPSAL 253 (426)
T ss_pred --cccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHH-------hhcCCccCCCHH
Confidence 7788999999988888876652 33444556677777776 677888877653
No 38
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.93 E-value=2.1e-26 Score=228.39 Aligned_cols=234 Identities=15% Similarity=0.149 Sum_probs=148.6
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|+||.||+|+.+.+|+.||||++++..... ..+. .. +..|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~------~~~e 45 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDEV-----------------------------AH------TLTE 45 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH-----------------------------HH------HHHH
Confidence 5899999999999998899999999987431100 0000 00 1112
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
...+.++ +++++.-...+.......++||||++|++|.+...... ........+..++..+++|||+.|++|||
T Consensus 46 ~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD 120 (323)
T cd05571 46 SRVLQNT-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120 (323)
T ss_pred HHHHHhC-----CCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 2222111 12222111112233456789999999999977643221 12223344557888899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||+||+++.+|.++|+|||++...... .....+ +.+.+++++.+.....+.++|+|++|+.+++++++
T Consensus 121 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg- 191 (323)
T cd05571 121 LKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC--------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG- 191 (323)
T ss_pred CCHHHEEECCCCCEEEeeCCCCcccccCCCccccee--------cCccccChhhhcCCCCCccccCcccchhhhhhhcC-
Confidence 9999999999999999999998753221 111112 23344444454444557889999999999999984
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
..|+...+...+...+.......+..+++.+..+++.+ ...||+-|+
T Consensus 192 -~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~-------L~~dP~~R~ 238 (323)
T cd05571 192 -RLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGL-------LKKDPKQRL 238 (323)
T ss_pred -CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH-------ccCCHHHcC
Confidence 45665555544444333222334455667777666666 567887776
No 39
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=4e-26 Score=222.75 Aligned_cols=260 Identities=16% Similarity=0.152 Sum_probs=158.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.|-+|+...+|+.||||++...-... .+. .++....--.-.+.+.+
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~----------------~~~---~~~~~a~~~~~~ekv~~------ 157 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRR----------------QYG---FPRQPAMKLMPIEKVRR------ 157 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhhh----------------hcc---cccccccccCcHHHHHH------
Confidence 67999999999999999899999999986432111 000 00000000000011222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccC-CCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|..-+.++. +..-|..-+|+.+- ++..|||+|||..|.+........ ...+.++.+.+.+..||+|||.+||+|
T Consensus 158 EIailKkl~----H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 158 EIAILKKLH----HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred HHHHHHhcC----CcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 222222222 22233444455443 567799999999999876533222 455667778888889999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCH----HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPE----EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|||||.|+|++.+|++||.|||.+...+. ..-..+..++.+.+...||.+..+- ..-+.+...|+|++|.++|-+
T Consensus 234 RDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~-~~~~~g~a~DiWalGVTLYCl 312 (576)
T KOG0585|consen 234 RDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGN-SFSYSGFALDIWALGVTLYCL 312 (576)
T ss_pred cccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCC-CccccchhhhhhhhhhhHHHh
Confidence 99999999999999999999999875521 1112233333333344455443211 011346688999999999988
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCCh------HHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHH
Q 012411 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPA------YYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAK 436 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~------~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~ 436 (464)
+-+ ..|+-+...-+ +..-+...++.+|. .+..+++.| +.-||+.++.-. .|||+.+
T Consensus 313 lfG--~~PF~~~~~~~----l~~KIvn~pL~fP~~pe~~e~~kDli~~l-------L~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 313 LFG--QLPFFDDFELE----LFDKIVNDPLEFPENPEINEDLKDLIKRL-------LEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred hhc--cCCcccchHHH----HHHHHhcCcccCCCcccccHHHHHHHHHH-------hhcChhheeehhhheecceecc
Confidence 863 44554433223 33333344555553 334444444 556787776544 5677544
No 40
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=6.5e-26 Score=203.99 Aligned_cols=246 Identities=18% Similarity=0.189 Sum_probs=173.7
Q ss_pred ccC-CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 130 SIS-PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 130 ~~~-~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+|+ .+|+|.|-||.||.|+.+.++-.||+||.....-.. .....++.+|
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~------------------------------~~v~~qlrRE 72 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILK------------------------------TQVEHQLRRE 72 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHH------------------------------hcchhhhhhe
Confidence 344 589999999999999999999999999986331000 1122333444
Q ss_pred hcHHHH--HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH---HhcCCCHHHHHHHHHHHHHHH
Q 012411 209 LNYVQE--GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI---ESQGLKVLDLVNTGIQCSLRQ 283 (464)
Q Consensus 209 ld~~~E--a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~ 283 (464)
+..... +.|+-++...|-+. ...||++||..+|++...... ..........+..+++.|+.|
T Consensus 73 iEIqs~L~hpnilrlY~~fhd~-------------~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y 139 (281)
T KOG0580|consen 73 IEIQSHLRHPNILRLYGYFHDS-------------KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLY 139 (281)
T ss_pred eEeecccCCccHHhhhhheecc-------------ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHH
Confidence 433222 33455555554443 344699999999998765442 123344556677889999999
Q ss_pred HHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
+|..+++|||+||+|+|++.+|.++++|||.+..-+...|.++||++-++ +||-+ +--..+..+|+|++|..
T Consensus 140 ~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl---~pEmv-----~~~~hd~~Vd~w~lgvl 211 (281)
T KOG0580|consen 140 CHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYL---PPEMV-----EGRGHDKFVDLWSLGVL 211 (281)
T ss_pred hccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccC---CHhhc-----CCCCccchhhHHHHHHH
Confidence 99999999999999999999999999999999988888888999875544 33332 22223678999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHH
Q 012411 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFA 435 (464)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~ 435 (464)
-++++-+ ..|+...+.++....|.++-..+|..++.....++-.+ ...+|.-++.-. .+||+.
T Consensus 212 ~yeflvg--~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~l-------l~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 212 CYEFLVG--LPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRL-------LVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred HHHHHhc--CCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHH-------hccCccccccHHHHhhhHHHH
Confidence 9999974 46777777777777777776777777777766665555 455665443322 577764
No 41
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.93 E-value=3.1e-26 Score=230.89 Aligned_cols=210 Identities=15% Similarity=0.182 Sum_probs=134.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|....+|+.||||+++...... .+....+..|.+..
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~~~~E~~il- 55 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE------------------------------KEQVGHIRAERDIL- 55 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH------------------------------hhHHHHHHHHHHHH-
Confidence 67999999999999998889999999986321100 00001112222211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeecc--CCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
.++ ++++ +++.+.. .....++||||++|++|.+..... .........+..++..++.|||+.|++
T Consensus 56 -----~~~-----~~~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~giv 123 (363)
T cd05628 56 -----VEA-----DSLW--VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFI 123 (363)
T ss_pred -----HhC-----CCCC--cceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 111 1122 2333322 234568999999999998875422 122233445567788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHH-----------------------------HHHHHHhcCHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-----------------------------HVVHMVNRDYEAM 341 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~-----------------------------~~~~~~~~~~~~~ 341 (464)
||||||+|||++.+|.++|+|||+++.+....+..... .......+.+.++
T Consensus 124 HrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~ 203 (363)
T cd05628 124 HRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYI 203 (363)
T ss_pred ecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcccc
Confidence 99999999999999999999999988654321100000 0000112344555
Q ss_pred HHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 012411 342 ARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 342 ~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (464)
+++....+..+.++|+||+|+.+++++.+ ..|+...+..+....+
T Consensus 204 aPE~~~~~~~~~~~DvwSlGvil~ell~G--~~Pf~~~~~~~~~~~i 248 (363)
T cd05628 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIG--YPPFCSETPQETYKKV 248 (363)
T ss_pred CHHHHcCCCCCCchhhhhhHHHHHHHHhC--CCCCCCCCHHHHHHHH
Confidence 56665555567889999999999999984 4566555544444333
No 42
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.93 E-value=4.6e-26 Score=232.22 Aligned_cols=197 Identities=22% Similarity=0.303 Sum_probs=148.6
Q ss_pred cccCCcccccceecEEEEEEEccCCcEEEEEEecCC----hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHH
Q 012411 129 SSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG----IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (464)
Q Consensus 129 ~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~----~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (464)
...-.+.+|.|+||.||+|+++.+|+.||||..++. ..+....++++||.+ +|+||+++++.=+..
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL----------nh~NIVk~f~iee~~ 83 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL----------NHPNIVKLFDIEETK 83 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc----------CchhhhhhcccCCcc
Confidence 344457899999999999999999999999998752 334445555555544 488888877631110
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH--HhcCCCHHHHHH--HHHHHH
Q 012411 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI--ESQGLKVLDLVN--TGIQCS 280 (464)
Q Consensus 205 ~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~--~~~~~~~~~~~~--~~i~~~ 280 (464)
.+ ..-+...++|||||.||+|...... +..|++...++. ..+..|
T Consensus 84 ----------------------------~~---~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~a 132 (732)
T KOG4250|consen 84 ----------------------------FL---GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSA 132 (732)
T ss_pred ----------------------------cc---CcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHH
Confidence 00 0013566899999999999876442 345666655544 445569
Q ss_pred HHHHHHCCcccCCCCCcceEEc--cCCc--EEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCC
Q 012411 281 LRQLLEYGYFHADPHPGNLLAT--PEGK--LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDV 355 (464)
Q Consensus 281 l~~lh~~gi~H~Dlkp~Nili~--~~g~--i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 355 (464)
+.|||++||+||||||+||++- .+|+ -||+|||.++.+++... ...+++..+++++++++- +.++..+
T Consensus 133 l~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~-------~~S~vGT~~YLhPel~E~q~~y~~tV 205 (732)
T KOG4250|consen 133 LRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSL-------FTSLVGTEEYLHPELYERQKKYTATV 205 (732)
T ss_pred HHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCe-------eeeecCchhhcChHHHhhccCcCcee
Confidence 9999999999999999999986 4455 69999999999987741 233456788899999984 8889999
Q ss_pred CcchHHHHHHHHHHHhcc
Q 012411 356 DVTPIVPALRNFFDDALN 373 (464)
Q Consensus 356 D~~sl~~~l~~~~~~~~~ 373 (464)
|.||+|+++|+..++.++
T Consensus 206 DLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 206 DLWSFGVTLYECATGELP 223 (732)
T ss_pred ehhhhhhHHHHHhccCCC
Confidence 999999999999997655
No 43
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.1e-26 Score=225.90 Aligned_cols=252 Identities=17% Similarity=0.205 Sum_probs=173.6
Q ss_pred CCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHH
Q 012411 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (464)
Q Consensus 121 g~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (464)
..+++.+|.++ ..||.||||.||-|++..+.+.||||...-...+....--.|++.+.-+ ..+.|||.+++-.-
T Consensus 21 k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL----~~l~HPntieYkgC 94 (948)
T KOG0577|consen 21 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFL----RQLRHPNTIEYKGC 94 (948)
T ss_pred cCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHH----HhccCCCcccccce
Confidence 45678888877 6799999999999999989999999998766555444444444444322 12345555443332
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHH--HHHHHH
Q 012411 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDL--VNTGIQ 278 (464)
Q Consensus 201 ~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~--~~~~i~ 278 (464)
+-+ ....|||||||-| +-+|+......++....+ +..+..
T Consensus 95 yLr-------------------------------------e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL 136 (948)
T KOG0577|consen 95 YLR-------------------------------------EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGAL 136 (948)
T ss_pred eec-------------------------------------cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHH
Confidence 111 2456899999987 777776666666555443 446677
Q ss_pred HHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHH---HHcCCCCCCC
Q 012411 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDY---YALDFLSPDV 355 (464)
Q Consensus 279 ~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~ 355 (464)
.||.|||+++.||||||.||||+++.|.|||.|||.+....+. .++.|+ |.+|++++ .+-|.++.++
T Consensus 137 ~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA--nsFvGT--------PywMAPEVILAMDEGqYdgkv 206 (948)
T KOG0577|consen 137 QGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA--NSFVGT--------PYWMAPEVILAMDEGQYDGKV 206 (948)
T ss_pred HHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch--hcccCC--------ccccchhHheeccccccCCcc
Confidence 7999999999999999999999999999999999999887765 235554 44444433 2457789999
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCC-hHHHHHHHHHHHHHHhhcccCCCCChHHh---hh
Q 012411 356 DVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVP-AYYALILRSLTVLEGLALYADPNFKVLAA---SY 431 (464)
Q Consensus 356 D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p-~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~ 431 (464)
|+||+|.+-.++.+ ..+|+-+++. +..+..+...-+..++ ++++..++.++ ..|++--|.-+++.+ -+
T Consensus 207 DvWSLGITCIELAE--RkPPlFnMNA---MSALYHIAQNesPtLqs~eWS~~F~~Fv---d~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 207 DVWSLGITCIELAE--RKPPLFNMNA---MSALYHIAQNESPTLQSNEWSDYFRNFV---DSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ceeeccchhhhhhh--cCCCccCchH---HHHHHHHHhcCCCCCCCchhHHHHHHHH---HHHHhhCcccCCcHHHHhhc
Confidence 99999998888887 3456555543 2334444444444444 56677777763 245555666666554 45
Q ss_pred HHH
Q 012411 432 PYF 434 (464)
Q Consensus 432 p~~ 434 (464)
+|+
T Consensus 279 ~fv 281 (948)
T KOG0577|consen 279 RFV 281 (948)
T ss_pred chh
Confidence 665
No 44
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.93 E-value=8.9e-26 Score=224.75 Aligned_cols=203 Identities=20% Similarity=0.204 Sum_probs=132.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|++..+|+.||||+.+...... ....+ .+ ..
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~--------------------------~~------~~ 50 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----LNEVR--------------------------HV------LT 50 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhHHH--------------------------HH------HH
Confidence 67999999999999998889999999986431110 00000 11 11
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|...+.++ . ++++.-..-+.......++||||++|++|.++..... ........+..++..++.|||+.|++||
T Consensus 51 e~~~l~~~----~-h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 125 (333)
T cd05600 51 ERDILTTT----K-SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHR 125 (333)
T ss_pred HHHHHHhC----C-CCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 11111111 1 1222111112223456789999999999988753221 1223334456788889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
||||+||+++.+|.++|+|||++....... .... +.+..+++++......+.++|+|++|+.+++++++
T Consensus 126 dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~-~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g-- 194 (333)
T cd05600 126 DLKPENFLIDASGHIKLTDFGLSKGIVTYA-NSVV--------GSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCG-- 194 (333)
T ss_pred CCCHHHEEECCCCCEEEEeCcCCccccccc-CCcc--------cCccccChhHhcCCCCCCccceecchHHHhhhhhC--
Confidence 999999999999999999999998764411 1111 22334444444444567889999999999999984
Q ss_pred cCCCCcCcHHHHHHHH
Q 012411 373 NSSVSELNFKTIVDGL 388 (464)
Q Consensus 373 ~~~~~~~~~~~~~~~l 388 (464)
..|+...+..+....+
T Consensus 195 ~~pf~~~~~~~~~~~i 210 (333)
T cd05600 195 FPPFSGSTPNETWENL 210 (333)
T ss_pred CCCCCCCCHHHHHHHH
Confidence 4566655555544443
No 45
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.93 E-value=9e-26 Score=223.80 Aligned_cols=234 Identities=18% Similarity=0.163 Sum_probs=149.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|++..+|+.||||++.+...........++.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~------------------------------------ 44 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMA------------------------------------ 44 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHH------------------------------------
Confidence 35899999999999998899999999986431110000000000
Q ss_pred HHHHHHHHHHHhCCCCCEEeceee--ccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (464)
|... +...+ .+++ +++++ .......++||||++|++|.+..... .... ....+..++..++.|||+.|+
T Consensus 45 e~~~---~~~~l-~hp~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~gi 117 (323)
T cd05575 45 ERNV---LLKNV-KHPF--LVGLHYSFQTADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNI 117 (323)
T ss_pred HHHH---HHhhC-CCCC--CCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 1000 01111 1122 12222 12235678999999999997764322 2233 333456788889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
+||||||+|||++.+|.++|+|||++....... ....+ +.+..++++....+..+.++|+|++|+.++++
T Consensus 118 vH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (323)
T cd05575 118 IYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC--------GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEM 189 (323)
T ss_pred EeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc--------CChhhcChhhhcCCCCCccccccccchhhhhh
Confidence 999999999999999999999999987532211 11122 23334444444445567889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
+++ ..|+...+..++...+.......+..+|+.+..+++.+ ...||.-|+.
T Consensus 190 l~g--~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~-------l~~~p~~R~~ 240 (323)
T cd05575 190 LYG--LPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGL-------LQKDRTKRLG 240 (323)
T ss_pred hcC--CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH-------hhcCHHhCCC
Confidence 984 45666656555555544333344455677777777777 4556665553
No 46
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.93 E-value=1.3e-25 Score=222.86 Aligned_cols=227 Identities=17% Similarity=0.132 Sum_probs=143.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+|+.||+|++.............++.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~------------------------------------ 44 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMS------------------------------------ 44 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHH------------------------------------
Confidence 35899999999999999889999999986421110000001111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|... +...+ +++++.-...+.......++||||++|++|.+...... ........+..++..++.|+|+.|++||
T Consensus 45 e~~~---~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHr 120 (325)
T cd05602 45 ERNV---LLKNV-KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120 (325)
T ss_pred HHHH---HHHhC-CCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 1000 00111 12222111112223456789999999999987643221 1122333456788889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||||+|||++.+|.++|+|||++...... .....+ +.+..++++.......+.++|+|++|+.+++++.+
T Consensus 121 Dlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (325)
T cd05602 121 DLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC--------GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred CCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc--------CCccccCHHHHcCCCCCCccccccccHHHHHHhcC
Confidence 99999999999999999999998754221 111112 23444455555445567889999999999999974
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
..|+...+..+....+.......+..+++.+..+++.+
T Consensus 193 --~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~ 230 (325)
T cd05602 193 --LPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGL 230 (325)
T ss_pred --CCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHH
Confidence 45665555555554443333334445677777777776
No 47
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.92 E-value=9.7e-26 Score=224.12 Aligned_cols=236 Identities=17% Similarity=0.162 Sum_probs=148.7
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|+||+||+|....+|+.||||++.+..... ..+. . .+..|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~-----------------------------~------~~~~E 45 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDEV-----------------------------A------HTLTE 45 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------H------HHHHH
Confidence 5899999999999998899999999987432110 0000 0 01112
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
...+..+ +++++.-...+.......++||||++|++|.+...... ........+..++..++.|||+.|++|||
T Consensus 46 ~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 46 SRVLKNT-----RHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred HHHHHhC-----CCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 2222111 12222111122233456789999999999976543221 12223344567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~ 373 (464)
|||+|||++.+|.++|+|||++......... . ....+.+..++++....+..+.++|+|++|+.+++++++ .
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~~~~~~~~~-~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG--~ 192 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCKEGITDAAT-M-----KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG--R 192 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCccCCCcccc-c-----ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhC--C
Confidence 9999999999999999999998764221110 0 011123344445554445567899999999999999984 4
Q ss_pred CCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 374 SSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 374 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
.|+...+...+...+...-...+..+++++..+++.+ ...||+-|+
T Consensus 193 ~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~-------L~~dP~~R~ 238 (328)
T cd05593 193 LPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGL-------LIKDPNKRL 238 (328)
T ss_pred CCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHH-------cCCCHHHcC
Confidence 5665555544444333222234455667777777666 566776664
No 48
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.92 E-value=2.6e-26 Score=212.25 Aligned_cols=208 Identities=19% Similarity=0.298 Sum_probs=150.6
Q ss_pred HHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHH-HHHHHHHHHHhchhc
Q 012411 111 EAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFY-LIRGVGFLINKYVDI 189 (464)
Q Consensus 111 ~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~-~l~~~~~~~~~~~~~ 189 (464)
+..+.=+..|.++++++|.-. +.+|.||+|.||+|.++.+|+.||||...- +.|+. +++.+...
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~--~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV------~sDLQEIIKEISIM------- 82 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIV--GKLGEGSYGSVHKAIHRESGHVLAIKKVPV------DTDLQEIIKEISIM------- 82 (502)
T ss_pred cccccChhhhcCChHHHHHHH--HHhcCCcchHHHHHHHhccCcEEEEEecCc------cchHHHHHHHHHHH-------
Confidence 344555667888999999887 679999999999999999999999998752 23332 22222211
Q ss_pred ccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccC--CCCceEEEeeecCcccCcHHHHHhcCC
Q 012411 190 ITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAIESQGL 267 (464)
Q Consensus 190 ~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~~~~~~ 267 (464)
+++ ..-+|.+.|..| .+..|+|||||..|+++|+...+...+
T Consensus 83 -----------------QQC-------------------~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L 126 (502)
T KOG0574|consen 83 -----------------QQC-------------------KSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPL 126 (502)
T ss_pred -----------------HHc-------------------CCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCc
Confidence 111 112333444443 467899999999999999988777666
Q ss_pred CHHHHHH--HHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHH
Q 012411 268 KVLDLVN--TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMAR 343 (464)
Q Consensus 268 ~~~~~~~--~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 343 (464)
....+.. ..-..+|+|||...-+|||+|.||||++.+|..||.|||.++++++.+ |.+..|+ |-++++
T Consensus 127 ~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGT--------PFWMAP 198 (502)
T KOG0574|consen 127 SEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGT--------PFWMAP 198 (502)
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccC--------cccccH
Confidence 5554433 334459999999999999999999999999999999999999998764 3334443 334443
Q ss_pred HH-HHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc
Q 012411 344 DY-YALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 344 ~~-~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
++ .+.|| ...+|+||+|.+..+|.+ ..+|+.++.
T Consensus 199 EVI~EIGY-~~~ADIWSLGITaIEMAE--G~PPYsDIH 233 (502)
T KOG0574|consen 199 EVIEEIGY-DTKADIWSLGITAIEMAE--GRPPYSDIH 233 (502)
T ss_pred HHHHHhcc-chhhhHhhhcchhhhhhc--CCCCccccc
Confidence 33 34565 778999999999999888 456666654
No 49
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.92 E-value=8.2e-25 Score=216.31 Aligned_cols=237 Identities=17% Similarity=0.136 Sum_probs=148.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+|+.||||+++...... ..+... ...|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~-----------------------------~~~e----- 45 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDVEC-----------------------------TMVE----- 45 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHH-----------------------------HHHH-----
Confidence 35899999999999998889999999987532110 000000 0000
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.. +.....+++++....-+.......++||||++|++|.+..... .........+..++..++.|||+.|++||
T Consensus 46 -~~----~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~ 120 (316)
T cd05592 46 -RR----VLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYR 120 (316)
T ss_pred -HH----HHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 00 0000112222211111112234568999999999997764322 12223334456778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||||+||+++.+|.++|+|||++....... ....+ +.+.+++++.......+.++|+|++|+.+++++.
T Consensus 121 dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~- 191 (316)
T cd05592 121 DLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC--------GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLI- 191 (316)
T ss_pred CCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc--------CCccccCHHHHcCCCCCCcccchhHHHHHHHHHh-
Confidence 999999999999999999999987643211 11112 2333444444444455788999999999999998
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
...|+...+..++...+.......+..+++.+..+++.+ ...||+-|+.
T Consensus 192 -G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~-------l~~~P~~R~~ 240 (316)
T cd05592 192 -GQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKL-------FERDPTKRLG 240 (316)
T ss_pred -CCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH-------ccCCHHHcCC
Confidence 445666666555555544332334445666666666655 5567766653
No 50
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.92 E-value=1.1e-24 Score=216.12 Aligned_cols=239 Identities=16% Similarity=0.129 Sum_probs=154.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||||+.++..... ..+. .. +..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~------~~~ 49 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV-----------------------------EC------TMV 49 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------HH------HHH
Confidence 67999999999999998889999999987432110 0000 00 011
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|...+ ....+++.+....-+.......++||||++|++|.+..... .........+..++..++.|+|+.|++||
T Consensus 50 e~~~l----~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 125 (323)
T cd05616 50 EKRVL----ALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYR 125 (323)
T ss_pred HHHHH----HhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 11111 11122333322222223345678999999999997764322 12223334456778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
|+||+|||++.+|.++|+|||++.......... ....+.+..++++....+..+.++|+||+|+.++++++ .
T Consensus 126 Dlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt--g 197 (323)
T cd05616 126 DLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA--G 197 (323)
T ss_pred CCCHHHeEECCCCcEEEccCCCceecCCCCCcc------ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHh--C
Confidence 999999999999999999999987543211000 01123344555555555666889999999999999998 4
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
..|+...+...+...+......++..+++.+..+++.+ ...||+-|+.
T Consensus 198 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~-------l~~~p~~R~~ 245 (323)
T cd05616 198 QAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGL-------MTKHPGKRLG 245 (323)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHH-------cccCHHhcCC
Confidence 46666666555555554433344556677777777776 5566665553
No 51
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.92 E-value=7e-25 Score=217.24 Aligned_cols=235 Identities=18% Similarity=0.172 Sum_probs=149.8
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|+||+||+|+++.+|+.||||+.+...... ..+. +.... |
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~~~~------e 45 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDDV-----------------------------DCTMT------E 45 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhHH-----------------------------HHHHH------H
Confidence 5899999999999998889999999986431110 0000 00011 1
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
.+-+ ....+++.+....-+.......++||||++|++|.+..... .........+..++..++.|||+.|++|||
T Consensus 46 ~~il----~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 121 (321)
T cd05591 46 KRIL----ALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRD 121 (321)
T ss_pred HHHH----HhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 1111 11112232221111222335578999999999997654322 112223344567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+||+||+++.+|.++|+|||++...... ...... +.+.+++++.......+.++|+|++|+.++++++
T Consensus 122 ikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-- 191 (321)
T cd05591 122 LKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC--------GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMA-- 191 (321)
T ss_pred CCHHHeEECCCCCEEEeecccceecccCCccccccc--------cCccccCHHHHcCCCCCCccceechhHHHHHHhc--
Confidence 9999999999999999999998754221 111122 2333444444444455788999999999999998
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
...|+...+.......+.......+..+++.+..+++.+ ...||+-|+
T Consensus 192 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~-------L~~dp~~R~ 239 (321)
T cd05591 192 GQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAF-------MTKNPNKRL 239 (321)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH-------hccCHHHcC
Confidence 445666666555555544333334555677877777777 456776665
No 52
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.92 E-value=1.7e-25 Score=221.66 Aligned_cols=235 Identities=17% Similarity=0.152 Sum_probs=145.2
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||.|+||+||+|++..+|+.||||++.......-.....+++....++ ....|+|++.+.+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l---~~~~h~~iv~~~~--------------- 63 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLL---KNLKHPFLVGLHY--------------- 63 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHH---HhCCCCCccceee---------------
Confidence 5899999999999998889999999986432111001111111111000 1112333222211
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcccC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
+.......++||||++|++|.+.... ..... ....+..++..+|.|||+.|++||
T Consensus 64 ----------------------~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~ 120 (321)
T cd05603 64 ----------------------SFQTAEKLYFVLDYVNGGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120 (321)
T ss_pred ----------------------EEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 11223556899999999999765332 22222 334456788889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||||+||+++.+|.++|+|||++...... .....+ +.+.+++++.+.....+.++|+|++|+.+++++++
T Consensus 121 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (321)
T cd05603 121 DLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC--------GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYG 192 (321)
T ss_pred cCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc--------CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcC
Confidence 99999999999999999999998753211 111112 22334444444444567889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
..|+...+...+...+.......+...+..+..+++.+ ...||.-++.
T Consensus 193 --~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~-------l~~~p~~R~~ 240 (321)
T cd05603 193 --LPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGL-------LHKDQRRRLG 240 (321)
T ss_pred --CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH-------ccCCHhhcCC
Confidence 45665555544444433222222333445555666665 5566766654
No 53
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.92 E-value=2.3e-25 Score=219.81 Aligned_cols=233 Identities=17% Similarity=0.209 Sum_probs=146.9
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||+|+||.||+|++..+|+.||||+++...... ..+. . .+..|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~---~--------------------------------~~~~E~ 44 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSEV---T--------------------------------HTLAER 44 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---H--------------------------------HHHHHH
Confidence 699999999999998889999999986321100 0000 0 011122
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccCCC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl 294 (464)
..+.++ +++++.-...+.......++||||++|++|.+..... .........+..++..++.|||+.|++||||
T Consensus 45 ~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDl 119 (312)
T cd05585 45 TVLAQV-----NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119 (312)
T ss_pred HHHHhC-----CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 222111 1222221111222345678999999999998764322 1222333445667888999999999999999
Q ss_pred CCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 295 HPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 295 kp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
||+||+++.+|.++|+|||++....... ....++ .+..++++.+.....+.++|+|++|+.+++++++
T Consensus 120 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g--------t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg-- 189 (312)
T cd05585 120 KPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG--------TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTG-- 189 (312)
T ss_pred CHHHeEECCCCcEEEEECcccccCccCCCccccccC--------CcccCCHHHHcCCCCCCccceechhHHHHHHHhC--
Confidence 9999999999999999999987642221 111222 2333444444444457889999999999999984
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
..|+...+...+...+.......+..+++.+..+++.+ ...||.-|+
T Consensus 190 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------L~~dp~~R~ 236 (312)
T cd05585 190 LPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGL-------LSRDPTRRL 236 (312)
T ss_pred CCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHH-------cCCCHHHcC
Confidence 45665555544444433322234445666666666665 667787775
No 54
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.92 E-value=9.8e-26 Score=223.60 Aligned_cols=234 Identities=15% Similarity=0.131 Sum_probs=147.4
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|+||.||+|+.+.+|+.||+|+.+...... ..+. ..+......+....|++++.+..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---~~~~~E~~~l~~l~hp~i~~~~~--------------- 62 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEV---AHTVTESRVLQNTRHPFLTALKY--------------- 62 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH---HHHHHHHHHHHhCCCCCCcceee---------------
Confidence 5899999999999998899999999987432110 0000 00000000111112222222211
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
+.......++||||++|++|.+...... ........+..++..++.|||+.|++|||
T Consensus 63 ----------------------~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 120 (323)
T cd05595 63 ----------------------AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120 (323)
T ss_pred ----------------------EEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 1122355689999999999976543221 12233444557788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||+|||++.+|.++|+|||++....... ..... +.+.+++++....+..+.++|+|++|+.+++++++
T Consensus 121 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g- 191 (323)
T cd05595 121 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC--------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG- 191 (323)
T ss_pred CCHHHEEEcCCCCEEecccHHhccccCCCCcccccc--------CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhC-
Confidence 99999999999999999999887532211 11111 22334444444445567889999999999999984
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
..|+...+.......+.......+..+++.+..+++.+ ...||+-|+
T Consensus 192 -~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~-------L~~dP~~R~ 238 (323)
T cd05595 192 -RLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL-------LKKDPKQRL 238 (323)
T ss_pred -CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH-------ccCCHHHhC
Confidence 45665555554444443322344556677777777766 455666554
No 55
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.92 E-value=1.3e-25 Score=227.86 Aligned_cols=234 Identities=12% Similarity=0.080 Sum_probs=139.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|++..+|+.||||+++...... ......+..|++.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~------------------------------~~~~~~~~~E~~i-- 54 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN------------------------------RNQVAHVKAERDI-- 54 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh------------------------------hHHHHHHHHHHHH--
Confidence 67999999999999999899999999986321000 0000112222221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
+.++ +++++.-..-+.......++||||++|++|.++..... ........+..++..++.|+|..||+||
T Consensus 55 ----l~~l-----~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHr 125 (381)
T cd05626 55 ----LAEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHR 125 (381)
T ss_pred ----HHhc-----CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 1111 12322222222223456789999999999987743221 1222334556778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHH---------------------------------H----H----HHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFA---------------------------------I----I----GHVV 331 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~---------------------------------~----~----~~~~ 331 (464)
||||+|||++.+|+++|+|||++..+....... + . ....
T Consensus 126 DlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (381)
T cd05626 126 DIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLA 205 (381)
T ss_pred CCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccccccc
Confidence 999999999999999999999976432110000 0 0 0000
Q ss_pred HHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHh--hC--CCCCChHHHHHH
Q 012411 332 HMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLY--QY--PFNVPAYYALIL 407 (464)
Q Consensus 332 ~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~--~~~~p~~~~~l~ 407 (464)
....+.+.+++++.......+.++|+||+|+.+++++++ ..|+...+.......+..... .. ...+++++..++
T Consensus 206 ~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG--~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli 283 (381)
T cd05626 206 HSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVG--QPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLI 283 (381)
T ss_pred ccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhC--CCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHH
Confidence 011234445555555444457889999999999999984 345554443333222221111 11 123556666666
Q ss_pred HHH
Q 012411 408 RSL 410 (464)
Q Consensus 408 r~l 410 (464)
+.+
T Consensus 284 ~~l 286 (381)
T cd05626 284 TKL 286 (381)
T ss_pred HHH
Confidence 655
No 56
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.92 E-value=2.7e-25 Score=220.61 Aligned_cols=226 Identities=17% Similarity=0.129 Sum_probs=141.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|+...+|+.||||+..............++. |
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~------------------------------e----- 45 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMA------------------------------E----- 45 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHH------------------------------H-----
Confidence 35899999999999998899999999986432111000000010 0
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.. .+...+ +++++.-...+.......++||||++|++|.+.... ..... ....+..++..++.|||+.|++|
T Consensus 46 -~~---~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH 119 (325)
T cd05604 46 -RN---VLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVY 119 (325)
T ss_pred -HH---HHHHhC-CCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 00 001111 122211111112234567899999999999765432 22233 33445678888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|||||+|||++.+|.++|+|||++...... .....+ +.+..++++....+..+.++|+|++|+.+++++.
T Consensus 120 ~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 191 (325)
T cd05604 120 RDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC--------GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLY 191 (325)
T ss_pred cCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc--------CChhhCCHHHHcCCCCCCcCccccccceehhhhc
Confidence 999999999999999999999998753221 111122 2344444555445556788999999999999997
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
+ ..|+...+..++...+.......+...++.+..+++.+
T Consensus 192 G--~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l 230 (325)
T cd05604 192 G--LPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEEL 230 (325)
T ss_pred C--CCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHH
Confidence 4 45665555555544443322223344566666777776
No 57
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.92 E-value=8.4e-26 Score=224.11 Aligned_cols=240 Identities=20% Similarity=0.260 Sum_probs=177.6
Q ss_pred CCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHH
Q 012411 89 CPPEYLEELSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA 168 (464)
Q Consensus 89 ~p~~~~~~l~~l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~ 168 (464)
+...|..|.++-|+..-.+|++.+... +=+|+|+.|.||+|+++ ++.||||..+ +.
T Consensus 103 iGk~~s~e~k~qq~e~WeiPFe~IsEL------------------eWlGSGaQGAVF~Grl~--netVAVKKV~----el 158 (904)
T KOG4721|consen 103 IGKAYSTEHKQQQEELWEIPFEEISEL------------------EWLGSGAQGAVFLGRLH--NETVAVKKVR----EL 158 (904)
T ss_pred hccceeeehhhhhhhhccCCHHHhhhh------------------hhhccCcccceeeeecc--CceehhHHHh----hh
Confidence 455566666666776666666654221 45999999999999995 8999999864 34
Q ss_pred HHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEE
Q 012411 169 IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTM 248 (464)
Q Consensus 169 ~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~Lvm 248 (464)
-.+|++-||.+ .|+||+.+...+.+. --.+|+|
T Consensus 159 kETdIKHLRkL----------kH~NII~FkGVCtqs-------------------------------------PcyCIiM 191 (904)
T KOG4721|consen 159 KETDIKHLRKL----------KHPNIITFKGVCTQS-------------------------------------PCYCIIM 191 (904)
T ss_pred hhhhHHHHHhc----------cCcceeeEeeeecCC-------------------------------------ceeEEee
Confidence 45666665544 477776655543321 2236999
Q ss_pred eeecCcccCcHHHHHhcCCCHHHHHH--HHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH-HHHH
Q 012411 249 EWVEGVKLNEQVAIESQGLKVLDLVN--TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFA 325 (464)
Q Consensus 249 E~~~G~~L~~~~~~~~~~~~~~~~~~--~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~-~~~~ 325 (464)
|||..|.|..+.+. .....+..++. .+|+.++.|||.+.|||||+|.-||||+.+..|||+|||.++.+++. .+..
T Consensus 192 EfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMS 270 (904)
T KOG4721|consen 192 EFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMS 270 (904)
T ss_pred eccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhh
Confidence 99999999887543 23455555544 56788999999999999999999999999999999999999987654 4455
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhh--CCCCCChHH
Q 012411 326 IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQ--YPFNVPAYY 403 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~p~~~ 403 (464)
++|++ .+|+++++.-.-++.++|||+||..+|||++ ...|+.+.+-..++|.++.-... .|-..|.-|
T Consensus 271 FaGTV--------aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT--~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~Gf 340 (904)
T KOG4721|consen 271 FAGTV--------AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLT--GEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGF 340 (904)
T ss_pred hhhhH--------hhhCHHHhhcCCcccccceehhHHHHHHHHh--cCCCccccchheeEEeccCCcccccCcccCchHH
Confidence 66664 3445555666667899999999999999999 67888888888888888754432 345577888
Q ss_pred HHHHHHH
Q 012411 404 ALILRSL 410 (464)
Q Consensus 404 ~~l~r~l 410 (464)
..|+|..
T Consensus 341 klL~Kqc 347 (904)
T KOG4721|consen 341 KLLLKQC 347 (904)
T ss_pred HHHHHHH
Confidence 8888765
No 58
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.92 E-value=5.5e-25 Score=218.62 Aligned_cols=225 Identities=17% Similarity=0.187 Sum_probs=148.1
Q ss_pred cccccceecEEEEEEEccCCcE-EEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQI-VAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~-VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.+|+|+||+||+|.++ |+. ||||++.+.-..... .+.+...+..+....|+|++.++.
T Consensus 47 ~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-----~~~f~~E~~il~~l~HpNIV~f~G------------- 106 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-----RKAFRREASLLSRLRHPNIVQFYG------------- 106 (362)
T ss_pred hhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-----HHHHHHHHHHHHhCCCCCeeeEEE-------------
Confidence 44999999999999995 776 999999765222100 111111111122233444443322
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHH--HHHHHHHHHHHHHCC-
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLV--NTGIQCSLRQLLEYG- 288 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~--~~~i~~~l~~lh~~g- 288 (464)
++.+......|||||++||+|.++.... ...++....+ ..++..|+.|+|+.+
T Consensus 107 -----------------------~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~ 163 (362)
T KOG0192|consen 107 -----------------------ACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP 163 (362)
T ss_pred -----------------------EEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2222112468999999999999986552 4455555544 455667999999999
Q ss_pred cccCCCCCcceEEccCC-cEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcchHHHHHH
Q 012411 289 YFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g-~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~D~~sl~~~l~ 365 (464)
|||||+||.|||++.++ ++||+|||+++...... ...+...+.+.+|++++++ -..++.++|++|||..++
T Consensus 164 iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlW 237 (362)
T KOG0192|consen 164 IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLW 237 (362)
T ss_pred eeecccChhhEEEcCCCCEEEECCCccceeecccc------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHH
Confidence 99999999999999998 99999999998765431 0001134557777777776 446799999999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHh--hCCCCCChHHHHHHHH
Q 012411 366 NFFDDALNSSVSELNFKTIVDGLGAVLY--QYPFNVPAYYALILRS 409 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~p~~~~~l~r~ 409 (464)
|+++ ...|+.+.+...+...+..... ..+...|+.+..++..
T Consensus 238 El~t--~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~ 281 (362)
T KOG0192|consen 238 ELLT--GEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMER 281 (362)
T ss_pred HHHH--CCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHH
Confidence 9999 5577877776444443321111 2233355555554444
No 59
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.92 E-value=1.7e-24 Score=214.06 Aligned_cols=241 Identities=18% Similarity=0.195 Sum_probs=151.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|+++.+|+.||||+.++..... ..+.. .. ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~-----------------------------~~------~~ 44 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVE-----------------------------CT------MV 44 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH-----------------------------HH------HH
Confidence 35899999999999999899999999987432110 00000 00 01
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (464)
|...+. ...+++. +++++. ...+..++||||++|++|.+..... ...+ ....+..++..++.|+|+.|+
T Consensus 45 e~~~l~----~~~~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 117 (316)
T cd05620 45 EKRVLA----LAWENPF--LTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGI 117 (316)
T ss_pred HHHHHH----hccCCCC--ccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 111111 1112222 222222 2345678999999999997764322 2233 334455778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPE--EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
+||||||+||+++.+|.++|+|||++..... ......+ +.+..++++.+..+..+.++|+|++|+.++++
T Consensus 118 vHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslGvil~el 189 (316)
T cd05620 118 IYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC--------GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEM 189 (316)
T ss_pred EecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC--------CCcCccCHHHHcCCCCCcccchhhhHHHHHHH
Confidence 9999999999999999999999999875321 1111112 23344445555555567889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHH--h--hhHHH
Q 012411 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA--A--SYPYF 434 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~--~--~~p~~ 434 (464)
+++ ..|+...+...+...+.......+..+++++..+++.+ ...||+-|+.. . .+||+
T Consensus 190 ~~g--~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~dP~~R~~~~~~~~~h~~f 251 (316)
T cd05620 190 LIG--QSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKL-------FERDPTRRLGVVGNIRGHPFF 251 (316)
T ss_pred HhC--CCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-------ccCCHHHcCCChHHHHcCCCc
Confidence 984 45665555555554443322233444556666666665 56778777643 2 25665
No 60
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.92 E-value=2.6e-24 Score=213.38 Aligned_cols=237 Identities=16% Similarity=0.141 Sum_probs=149.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|..+.+|+.||||+.+...... ..+. +. +..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~-----------------------------~~------~~~ 49 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV-----------------------------EC------TMV 49 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------HH------HHH
Confidence 67999999999999998899999999986431110 0000 00 011
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|...+. ...+++.+..-..+.......++||||++|++|.+..... .........+..++..++.|+|+.|++||
T Consensus 50 e~~~l~----~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHr 125 (323)
T cd05615 50 EKRVLA----LQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYR 125 (323)
T ss_pred HHHHHH----hccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 111111 1111222111111122234578999999999998764321 12223344556778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+||+|||++.+|.++|+|||++....... ..... +.+..++++....+..+.++|+||+|+.+++++++
T Consensus 126 Dikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG 197 (323)
T cd05615 126 DLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFC--------GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 197 (323)
T ss_pred CCCHHHeEECCCCCEEEeccccccccCCCCccccCcc--------CCccccCHHHHcCCCCCCccchhhhHHHHHHHHhC
Confidence 999999999999999999999987542211 11111 23344445554445567889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
..|+...+...+...+......++..+++.+..+++.+ ...||.-++.
T Consensus 198 --~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~-------l~~~p~~R~~ 245 (323)
T cd05615 198 --QPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGL-------MTKHPSKRLG 245 (323)
T ss_pred --CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHH-------cccCHhhCCC
Confidence 45666665555555554433344555666666666655 4566665553
No 61
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.92 E-value=5.1e-25 Score=220.58 Aligned_cols=234 Identities=16% Similarity=0.140 Sum_probs=144.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|++..+|+.||||+.+...... ..... .+......+....|++++.+...+
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---~~~~e~~~l~~~~~~~i~~~~~~~------------ 70 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-RNQIA---HVRAERDILADADSPWIVKLYYSF------------ 70 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-ccHHH---HHHHHHHHHHhcCCCCccchhhhe------------
Confidence 67999999999999998899999999986431110 00001 111111111112244444333321
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
......++||||++|++|.+..... .........+..++..+|.|||+.|++|+
T Consensus 71 -------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~ 125 (350)
T cd05573 71 -------------------------QDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHR 125 (350)
T ss_pred -------------------------ecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 1124568999999999998875432 12223344556788889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-----------------------HHHHHHHHHhcCHHHHHHHHHHcC
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-----------------------IIGHVVHMVNRDYEAMARDYYALD 349 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~g 349 (464)
||||+|||++.+|.++|+|||++..+....... ..........+.+..++++.....
T Consensus 126 Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 205 (350)
T cd05573 126 DIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT 205 (350)
T ss_pred CCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence 999999999999999999999998765432000 000000111233444555555555
Q ss_pred CCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH--HhhCCC--CCChHHHHHHHHH
Q 012411 350 FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAV--LYQYPF--NVPAYYALILRSL 410 (464)
Q Consensus 350 ~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~--~~p~~~~~l~r~l 410 (464)
..+.++|+|++|+.+++++.+ ..|+...+.......+... ....+. .+|+.+..+++.+
T Consensus 206 ~~~~~~DiwSlG~il~ell~g--~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~l 268 (350)
T cd05573 206 PYGLECDWWSLGVILYEMLYG--FPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRL 268 (350)
T ss_pred CCCCceeeEecchhhhhhccC--CCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHH
Confidence 568899999999999999984 4555555544333333321 111222 2366666666655
No 62
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.92 E-value=2.1e-25 Score=221.37 Aligned_cols=234 Identities=15% Similarity=0.157 Sum_probs=148.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|.+..+|+.||+|++.+...... .+. . .+..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~-~~~-----------------------------~------~~~~ 44 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK-DEV-----------------------------A------HTLT 44 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh-hHH-----------------------------H------HHHH
Confidence 358999999999999988999999999864311100 000 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH-CCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE-YGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~-~gi~ 290 (464)
|.+.+..+ .++++.....+.......++||||++|++|.+..... ...+ ....+..++..++.|||+ .|++
T Consensus 45 e~~~l~~~-----~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~iv 118 (325)
T cd05594 45 ENRVLQNS-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVV 118 (325)
T ss_pred HHHHHHhC-----CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence 22222111 1222221112223345678999999999997654322 2233 334455778889999997 7999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
||||||+|||++.+|.++|+|||++...... ...... +.+..++++....+..+.++|+|++|+.+++++
T Consensus 119 HrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 190 (325)
T cd05594 119 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC--------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 190 (325)
T ss_pred ecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccccc--------CCcccCCHHHHccCCCCCccccccccceeeeec
Confidence 9999999999999999999999998753221 111112 233344444544555688999999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
++ ..|+...+.......+.......+..+++.+..+++.+ ...||.-|+
T Consensus 191 tG--~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~-------L~~dP~~R~ 239 (325)
T cd05594 191 CG--RLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGL-------LKKDPKQRL 239 (325)
T ss_pred cC--CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH-------hhcCHHHhC
Confidence 84 34555555444444333222344556777777777776 556676664
No 63
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.92 E-value=1.9e-24 Score=214.35 Aligned_cols=236 Identities=16% Similarity=0.136 Sum_probs=150.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|....+++.||||+.++..... ..+. +. +..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~-----------------------------~~------~~~ 49 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDV-----------------------------EC------TMV 49 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------HH------HHH
Confidence 67999999999999998889999999987431100 0000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|.+.+.. ..+.+.+....-+.......++||||++|++|.+...... ........+..++..++.|+|+.|++||
T Consensus 50 e~~~l~~----~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~ 125 (324)
T cd05587 50 EKRVLAL----PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYR 125 (324)
T ss_pred HHHHHHh----cCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 2222111 1122222211112223456799999999999977643221 1222334455678889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCC--HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETP--EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||||+|||++.+|.++|+|||++.... .......+ +.+.+++++.+..+..+.++|+|++|+.+++++++
T Consensus 126 dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG 197 (324)
T cd05587 126 DLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFC--------GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 197 (324)
T ss_pred CCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeec--------CCccccChhhhcCCCCCcccchhhhHHHHHHHHhC
Confidence 999999999999999999999986531 11111112 22333444444444557889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
..|+...+..+....+......++..+++.+..+++.+ ...||.-|+
T Consensus 198 --~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~-------l~~~P~~R~ 244 (324)
T cd05587 198 --QPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGL-------LTKHPAKRL 244 (324)
T ss_pred --CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH-------hhcCHHHcC
Confidence 45666666555555554433344556777777777776 456666554
No 64
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.92 E-value=1e-24 Score=221.60 Aligned_cols=184 Identities=19% Similarity=0.274 Sum_probs=132.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChH--HHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE--EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~--~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.||+|+||||-+|+++.||+.||||+++.... .+...++
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei-------------------------------------- 233 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEI-------------------------------------- 233 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHH--------------------------------------
Confidence 789999999999999999999999999975422 1111222
Q ss_pred HHHHHHHHHHHHHhCCCCCEEecee--eccCCCCceEEEeeecCcccCcHHHHHh-cC--CCHHHHHHHHHHHHHHHHHH
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDI--FWDYTSGKVLTMEWVEGVKLNEQVAIES-QG--LKVLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v--~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~--~~~~~~~~~~i~~~l~~lh~ 286 (464)
+-++.+.+ ........+.+. |..+.++.|||.|.++- .|.++.+.+. .| +...+.+..++..+|..||+
T Consensus 234 ----~iL~~ln~-~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~ 307 (586)
T KOG0667|consen 234 ----RILELLNK-HDPDDKYNIVRMLDYFYFRNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE 307 (586)
T ss_pred ----HHHHHHhc-cCCCCCeeEEEeeeccccccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 22222222 111122223333 33346788999999954 8888765433 34 34456677889999999999
Q ss_pred CCcccCCCCCcceEEccCC--cEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEG--KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g--~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
.|||||||||+|||+..-+ .||+||||.+...++.. +..+-+..++.||.+...- ++.++|+|||||++
T Consensus 308 l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v----ytYiQSRfYRAPEVILGlp-----Y~~~IDmWSLGCIl 378 (586)
T KOG0667|consen 308 LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV----YTYIQSRFYRAPEVILGLP-----YDTAIDMWSLGCIL 378 (586)
T ss_pred CCeeeccCChhheeeccCCcCceeEEecccccccCCcc----eeeeeccccccchhhccCC-----CCCccceeehhhhH
Confidence 9999999999999997544 59999999998876543 2334467888898774332 37899999999999
Q ss_pred HHHHHH
Q 012411 365 RNFFDD 370 (464)
Q Consensus 365 ~~~~~~ 370 (464)
.||+.+
T Consensus 379 AEL~tG 384 (586)
T KOG0667|consen 379 AELFTG 384 (586)
T ss_pred HhHhcC
Confidence 999986
No 65
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.92 E-value=2e-25 Score=225.48 Aligned_cols=207 Identities=14% Similarity=0.124 Sum_probs=131.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+|+.||+|+........ ..+.. .+.+
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~-----------------------------~~~~------ 92 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSDSA-----------------------------FFWE------ 92 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHH-----------------------------HHHH------
Confidence 67999999999999999889999999985321000 00000 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|...+. .. +++++.-..-........++||||++|++|.++.............+..++..++.|||+.|++|||
T Consensus 93 e~~i~~----~~-~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrD 167 (370)
T cd05621 93 ERDIMA----FA-NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRD 167 (370)
T ss_pred HHHHHH----hC-CCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 111111 11 2232222111222345679999999999998875433333334445667888899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcchHHHHHHHHHH
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL----DFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|||+|||++.+|.++|+|||++..+........ ....+.+.+++++.... +..+.++|+||+|+.++++++
T Consensus 168 LKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~-----~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~ 242 (370)
T cd05621 168 VKPDNMLLDKHGHLKLADFGTCMKMDETGMVRC-----DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV 242 (370)
T ss_pred CCHHHEEECCCCCEEEEecccceecccCCceec-----ccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh
Confidence 999999999999999999999987643211000 01112233334443321 235778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHH
Q 012411 370 DALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l 388 (464)
+ ..|+...+.......+
T Consensus 243 G--~~Pf~~~~~~~~~~~i 259 (370)
T cd05621 243 G--DTPFYADSLVGTYSKI 259 (370)
T ss_pred C--CCCCCCCCHHHHHHHH
Confidence 4 4566555544444333
No 66
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.91 E-value=5.2e-24 Score=207.28 Aligned_cols=237 Identities=15% Similarity=0.155 Sum_probs=147.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||||++......... .+..+.+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------------~~~~~~~ 49 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK------------------------------------GEAMALN 49 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhh------------------------------------hHHHHHH
Confidence 6799999999999999889999999998643211100 0011222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++. ++.+....-+.......+++|||++|++|.+...... .+.+.. ..+..++..++.|+|+.|++
T Consensus 50 E~~il~~l~-----~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05631 50 EKRILEKVN-----SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIV 124 (285)
T ss_pred HHHHHHhcC-----CCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 333332221 2222211112223456789999999999976543221 233333 34456788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|||+||+|||++.++.++|+|||++..+...... .. ..+.+..++++.+..+..+.++|+||+|+.+++++++
T Consensus 125 H~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~-----~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g 197 (285)
T cd05631 125 YRDLKPENILLDDRGHIRISDLGLAVQIPEGETV--RG-----RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG 197 (285)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee--cC-----CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhC
Confidence 9999999999999999999999998876432110 00 0122333444444445567889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHH----HhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 371 ALNSSVSELNFKTIVDGLGAV----LYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
..|+...+.......+... ...++..+++.+..+++.+ ...||.-|+.
T Consensus 198 --~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~-------l~~~P~~R~~ 249 (285)
T cd05631 198 --QSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRML-------LTKNPKERLG 249 (285)
T ss_pred --CCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHH-------hhcCHHHhcC
Confidence 4455443322112222222 2233445666666666666 5566766653
No 67
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.91 E-value=8.9e-25 Score=218.27 Aligned_cols=233 Identities=15% Similarity=0.071 Sum_probs=147.8
Q ss_pred cccccceecEEEEEEEccCC-cEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSG-QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g-~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.||+|+||.||+|.++.++ ..||||+........ ... . +. +.
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~-~~~---~--------------------------~~------~~ 79 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIK-QKQ---V--------------------------DH------VF 79 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhh-hhh---H--------------------------HH------HH
Confidence 78999999999999876444 689999885321100 000 0 00 11
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
.|...+..+ +++++.-..-+....+..++||||++|++|.+..... ...+ ....+..++..++.|+|+.|++
T Consensus 80 ~E~~~l~~l-----~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~iv 153 (340)
T PTZ00426 80 SERKILNYI-----NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNIV 153 (340)
T ss_pred HHHHHHHhC-----CCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 122222211 1122111111112234568999999999998774422 2233 3345567888899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||||||+|||++.+|.++|+|||++..+..... ..+ +.+.+++++.......+.++|+||+|+.+++++++
T Consensus 154 HrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~-~~~--------gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G 224 (340)
T PTZ00426 154 YRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTY-TLC--------GTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVG 224 (340)
T ss_pred ccCCCHHHEEECCCCCEEEecCCCCeecCCCcc-eec--------CChhhcCHHHHhCCCCCccccccchhhHHHHHhcC
Confidence 999999999999999999999999987654321 122 23444555554444457889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
..|+...+...+...+......++..+++.+..+++.+ ...||.-|+
T Consensus 225 --~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~-------l~~dp~~R~ 271 (340)
T PTZ00426 225 --CPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKL-------LSHDLTKRY 271 (340)
T ss_pred --CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH-------cccCHHHcC
Confidence 34555554444444444333345556677777777776 455665553
No 68
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.91 E-value=1.2e-24 Score=215.85 Aligned_cols=238 Identities=18% Similarity=0.196 Sum_probs=145.7
Q ss_pred cccccceecEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|+||.||+|+.. .+|+.||||+++..... .+......+......+....|+|++.+++.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~~E~~il~~l~hp~iv~~~~~---------- 68 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQKDTAHTKAERNILEAVKHPFIVDLIYA---------- 68 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhhhHHHHHHHHHHHHhCCCCchhceeeE----------
Confidence 57999999999999863 36889999998643111 000000000011111111123333332221
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc-CCCHHHHHHHHHHHHHHHHHHCCc
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKVLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~~~~~~~~i~~~l~~lh~~gi 289 (464)
....+..++||||++|++|.+....... .......+..++..++.|||+.|+
T Consensus 69 ---------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 69 ---------------------------FQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred ---------------------------EecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 1223556899999999999776432211 112333455678889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+||||||+|||++.+|.++|+|||+++......... ....+.+.+++++.......+.++|+|++|+.++++++
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 195 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVT------HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLT 195 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcc------cccCCCccccChhhccCCCCCCcceecccHHHHHHHhc
Confidence 999999999999999999999999987532211100 01112233344444444445778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
+ ..|+...+.......+.......+..+++.+..+++.+ ...||+-|+
T Consensus 196 G--~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~~p~~R~ 243 (323)
T cd05584 196 G--APPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKL-------LKRNPSSRL 243 (323)
T ss_pred C--CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH-------cccCHhHcC
Confidence 4 45666555544444443333334445666666666666 566777665
No 69
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.91 E-value=9.4e-24 Score=211.01 Aligned_cols=201 Identities=18% Similarity=0.236 Sum_probs=132.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|+||+||+|.+..+|+.||||+......... ..+.+...+..+....|+|++.+++.+...
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------- 86 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLI-----HARRTYRELRLLKHMKHENVIGLLDVFTPA--------- 86 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhH-----HHHHHHHHHHHHHhcCCCchhhhhhhhccc---------
Confidence 789999999999999988999999999875422211 111111122222334577777776643211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
. ........+++||++ |++|.++.............+..++..++.|||+.|++|||
T Consensus 87 ---------------~-------~~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrd 143 (343)
T cd07878 87 ---------------T-------SIENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRD 143 (343)
T ss_pred ---------------c-------cccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 0 001124457999988 66777664332233334455667888899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~ 373 (464)
|||+||+++.++.++|+|||++........ ...+ +..+..||.+. .....+.++|+|++|+.+++++++ .
T Consensus 144 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~---t~~y~aPE~~~----~~~~~~~~~DiwslG~il~el~~g--~ 213 (343)
T cd07878 144 LKPSNVAVNEDCELRILDFGLARQADDEMT-GYVA---TRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLKG--K 213 (343)
T ss_pred CChhhEEECCCCCEEEcCCccceecCCCcC-Cccc---cccccCchHhc----CCccCCchhhhHhHHHHHHHHHHC--C
Confidence 999999999999999999999987654321 1122 22233444331 112357789999999999999984 3
Q ss_pred CCCCcCcH
Q 012411 374 SSVSELNF 381 (464)
Q Consensus 374 ~~~~~~~~ 381 (464)
.++...+.
T Consensus 214 ~pf~~~~~ 221 (343)
T cd07878 214 ALFPGNDY 221 (343)
T ss_pred CCCCCCCH
Confidence 44444443
No 70
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.91 E-value=8.4e-25 Score=216.27 Aligned_cols=238 Identities=18% Similarity=0.159 Sum_probs=146.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||||++++..... ..+.. .. ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~-----------------------------~~------~~ 44 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDDVE-----------------------------CT------MV 44 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH-----------------------------HH------HH
Confidence 35899999999999998889999999987542110 00000 00 01
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|...+ ....+++++.-..-+.......++||||++|++|.+..... .........+..++..++.|||+.|++||
T Consensus 45 e~~~l----~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHr 120 (316)
T cd05619 45 EKRVL----SLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120 (316)
T ss_pred HHHHH----HhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeC
Confidence 11110 01112222211111122234568999999999998764321 12233444556788889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPE--EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+||+||+++.++.++|+|||++..... ....... +.+..++++.......+.++|+|++|+.+++++++
T Consensus 121 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G 192 (316)
T cd05619 121 DLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC--------GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIG 192 (316)
T ss_pred CCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec--------CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhC
Confidence 9999999999999999999999875321 1111111 22333444444444567889999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA 428 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~ 428 (464)
..|+...+..++...+......++..++..+..++..+ ...||+-|+..
T Consensus 193 --~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~-------l~~~P~~R~~~ 241 (316)
T cd05619 193 --QSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKL-------FVREPERRLGV 241 (316)
T ss_pred --CCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHH-------hccCHhhcCCC
Confidence 45666666555554443222223333455555555554 55677766543
No 71
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.91 E-value=2.4e-24 Score=209.50 Aligned_cols=198 Identities=18% Similarity=0.152 Sum_probs=128.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|+++.+|+.||||+.+....... ....+...+..+....|++++.+.+.+.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~----------- 70 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE-----VKETTLRELKMLRTLKQENIVELKEAFR----------- 70 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEeccccccc-----chhhHHHHHHHHHhCCCccccchhhhEe-----------
Confidence 679999999999999988899999999864321100 0000011111111223555555444321
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.....++||||++|+.+..+... ..+.+. ...+..++..++.++|+.|++|
T Consensus 71 --------------------------~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 123 (287)
T cd07848 71 --------------------------RRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVH 123 (287)
T ss_pred --------------------------cCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 12456799999999876654221 222333 3445677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.++.++|+|||++..+................+..|| ....+..+.++|+|++|+.+++++++
T Consensus 124 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~DiwslGvil~el~~g- 197 (287)
T cd07848 124 RDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPE-----LLLGAPYGKAVDMWSVGCILGELSDG- 197 (287)
T ss_pred CCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcH-----HHcCCCCCCchhHHhHHHHHHHHHhC-
Confidence 999999999999999999999999876433211111111122233344 33344457889999999999999984
Q ss_pred ccCCCCcCcH
Q 012411 372 LNSSVSELNF 381 (464)
Q Consensus 372 ~~~~~~~~~~ 381 (464)
..++...+.
T Consensus 198 -~~pf~~~~~ 206 (287)
T cd07848 198 -QPLFPGESE 206 (287)
T ss_pred -CCCCCCCCH
Confidence 455555443
No 72
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.91 E-value=6.3e-25 Score=221.27 Aligned_cols=209 Identities=17% Similarity=0.166 Sum_probs=132.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+|+.||||++....... ......+.+|.+.+.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------~~~~~~~~~E~~il~ 56 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLE------------------------------KEQVAHVRAERDILA 56 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhh------------------------------hhHHHHHHHHHHHHH
Confidence 68999999999999998899999999986321000 000011122222211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.+ +++++.-..-+.......++||||++|++|.+...... ........+..++..++.|||+.|++||
T Consensus 57 ------~l-----~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~ 125 (364)
T cd05599 57 ------EA-----DNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHR 125 (364)
T ss_pred ------hC-----CCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 11 12222111112223456789999999999988744321 1223344566788889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHH-------------------------HH-------HHHHHhcCHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-------------------------GH-------VVHMVNRDYEA 340 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~-------------------------~~-------~~~~~~~~~~~ 340 (464)
||||+|||++.+|.++|+|||++..+......... .. ......+.+..
T Consensus 126 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 205 (364)
T cd05599 126 DIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDY 205 (364)
T ss_pred cCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccc
Confidence 99999999999999999999998765322110000 00 00001234455
Q ss_pred HHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 012411 341 MARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 341 ~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (464)
++++++..+..+.++|+||+|+.+++++++ ..|+...+.....
T Consensus 206 ~aPE~~~~~~~~~~~DiwSlG~il~el~~G--~~Pf~~~~~~~~~ 248 (364)
T cd05599 206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVG--YPPFCSDNPQETY 248 (364)
T ss_pred cCHHHHcCCCCCCeeeeecchhHHHHhhcC--CCCCCCCCHHHHH
Confidence 555555555568889999999999999984 4566555544433
No 73
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.91 E-value=4.5e-25 Score=223.07 Aligned_cols=203 Identities=15% Similarity=0.156 Sum_probs=130.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.++.+|+.||+|++....... ..+.. .+.+
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~~~-----------------------------~~~~------ 92 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSA-----------------------------FFWE------ 92 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh-hHHHH-----------------------------HHHH------
Confidence 78999999999999999899999999985321000 00000 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.. . +++++ ++++. ......++||||++|++|.++.............+..++..++.|+|+.|++|
T Consensus 93 e~~i~~~----~-~hp~i--v~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (371)
T cd05622 93 ERDIMAF----A-NSPWV--VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH 165 (371)
T ss_pred HHHHHHh----C-CCCCC--CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 1111111 1 12222 22222 22345789999999999988754332223334455677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcchHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL----DFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~D~~sl~~~l~~~ 367 (464)
|||||+|||++.+|.++|+|||++..+........ ....+.+..+++++... +..+.++|+||+|+.++++
T Consensus 166 rDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~-----~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyel 240 (371)
T cd05622 166 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-----DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240 (371)
T ss_pred CCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccc-----cCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHH
Confidence 99999999999999999999999987643211000 01112333444444322 2357889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHH
Q 012411 368 FDDALNSSVSELNFKTIVD 386 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~ 386 (464)
+++ ..|+...+......
T Consensus 241 l~G--~~Pf~~~~~~~~~~ 257 (371)
T cd05622 241 LVG--DTPFYADSLVGTYS 257 (371)
T ss_pred HhC--CCCCCCCCHHHHHH
Confidence 984 45666555443333
No 74
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.91 E-value=4.1e-25 Score=221.28 Aligned_cols=253 Identities=20% Similarity=0.224 Sum_probs=162.8
Q ss_pred HHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHH
Q 012411 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (464)
Q Consensus 124 ~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (464)
..+.|.-. +.||.|.||+||+|+.+.+|+.+|+|++.+....... + .+
T Consensus 33 ~~~~Y~l~--~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~-~-----------------------------~~ 80 (382)
T KOG0032|consen 33 IKEKYELG--RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE-D-----------------------------RE 80 (382)
T ss_pred ccccEEeh--hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc-c-----------------------------HH
Confidence 33344433 6899999999999999988999999998644221100 0 01
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCC-EEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHH
Q 012411 204 RVYQELNYVQEGQNARRFKKLYADKED-VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLR 282 (464)
Q Consensus 204 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~-v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~ 282 (464)
.+ .+|.+.+.++ +.+++ +.++.+| +.....++|||+|+||.|.+.+............+..++..+++
T Consensus 81 ~v------~~Ev~il~~l----~~hpniv~l~~~~-e~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~ 149 (382)
T KOG0032|consen 81 DV------RREVAILQQL----SGHPNIVQLKDAF-EDPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVK 149 (382)
T ss_pred HH------HHHHHHHHhc----cCCCCEEEEEEEE-EcCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 11 1122222222 11232 3333333 33457799999999999998754331333344556788888999
Q ss_pred HHHHCCcccCCCCCcceEEcc----CCcEEEEecCCCCcCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 012411 283 QLLEYGYFHADPHPGNLLATP----EGKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~----~g~i~l~DFGl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~ 357 (464)
|+|+.|++|||+||+|+|+.. ++.++++|||++...... .....+ +.+++++++.....-++..+|+
T Consensus 150 ~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~--------Gtp~y~APEvl~~~~y~~~~Di 221 (382)
T KOG0032|consen 150 YLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIV--------GTPEYVAPEVLGGRPYGDEVDV 221 (382)
T ss_pred HHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeec--------CCccccCchhhcCCCCCcccch
Confidence 999999999999999999973 357999999999988763 222233 3466666666654556889999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCC----CCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---h
Q 012411 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYP----FNVPAYYALILRSLTVLEGLALYADPNFKVLAA---S 430 (464)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~ 430 (464)
||+|+.++-++.++ .|+...+-......+...-+.+. ..+......+++.+ ...||..|+++. .
T Consensus 222 WS~Gvi~yiLL~G~--~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~l-------l~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 222 WSIGVILYILLSGV--PPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKL-------LEFDPRKRLTAAQALQ 292 (382)
T ss_pred hHHHHHHHHHhhCC--CCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHh-------cccCcccCCCHHHHhc
Confidence 99999999998854 56655554344444433322222 12333444444444 677888777765 6
Q ss_pred hHHHHH
Q 012411 431 YPYFAK 436 (464)
Q Consensus 431 ~p~~~~ 436 (464)
|||+..
T Consensus 293 HpWi~~ 298 (382)
T KOG0032|consen 293 HPWIKS 298 (382)
T ss_pred CccccC
Confidence 788653
No 75
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.91 E-value=6e-24 Score=211.32 Aligned_cols=236 Identities=17% Similarity=0.156 Sum_probs=143.2
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|+||.||+|++..+|+.||||+++...... ..+.. .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~-~~~~~-----------------------------~~~~e~~---- 47 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND-DEDID-----------------------------WVQTEKH---- 47 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH-----------------------------HHHHHHH----
Confidence 5899999999999999899999999987432110 00000 0111111
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
.+ ....+++++.--.-+....+..++||||++|++|.+..... .........+..++..++.|+|+.|++|||
T Consensus 48 --il----~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d 121 (329)
T cd05588 48 --VF----ETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRD 121 (329)
T ss_pred --HH----HhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 11 11112232211111122345679999999999997654321 122233344567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCC-HH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETP-EE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+||+||+++.+|.++|+|||++.... .. .....+ +.+.+++++....+..+.++|+|++|+.+++++++.
T Consensus 122 lkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~ 193 (329)
T cd05588 122 LKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC--------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 193 (329)
T ss_pred CCHHHeEECCCCCEEECcCccccccccCCCcccccc--------CCccccCHHHHcCCCCCCccceechHHHHHHHHHCC
Confidence 99999999999999999999987531 11 111122 233344444544455678899999999999999853
Q ss_pred ccCCCCcC--------cHHH-HHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 372 LNSSVSEL--------NFKT-IVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 372 ~~~~~~~~--------~~~~-~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
.|+... .... +...+.......+..+++.+..+++.+ ...||.-|+.
T Consensus 194 --~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~-------L~~dP~~R~~ 249 (329)
T cd05588 194 --SPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGF-------LNKDPKERLG 249 (329)
T ss_pred --CCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHH-------hccCHHHcCC
Confidence 333211 1111 111222111223444556666777776 5567776654
No 76
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.91 E-value=9.9e-26 Score=203.23 Aligned_cols=252 Identities=19% Similarity=0.206 Sum_probs=180.6
Q ss_pred HhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHH
Q 012411 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (464)
Q Consensus 125 ~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (464)
++.|+-+ +.||+|.|+.|+++.+..+|+.+|+|++.-.... ..|.+-+.+-++... .++||+|+.+.+.+.+.
T Consensus 10 ~d~y~l~--e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~~~~e~l~rEarIC~---~LqHP~IvrL~~ti~~~ 82 (355)
T KOG0033|consen 10 SDNYDVK--EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICR---KLQHPNIVRLHDSIQEE 82 (355)
T ss_pred chhhhHH--HHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--cccHHHHHHHHHHHH---hcCCCcEeehhhhhccc
Confidence 3444444 5799999999999999999999999988633222 224443433333332 23577777776654322
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCc-HHHHHhcCCCHHHHHHHHHHHHHHH
Q 012411 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE-QVAIESQGLKVLDLVNTGIQCSLRQ 283 (464)
Q Consensus 205 ~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~-~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (464)
+-++||.|+++|+.|.. +.+..-.......-+..|+..++.|
T Consensus 83 -------------------------------------~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~y 125 (355)
T KOG0033|consen 83 -------------------------------------SFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAY 125 (355)
T ss_pred -------------------------------------ceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999999864 3222222333444567889999999
Q ss_pred HHHCCcccCCCCCcceEEccC---CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 012411 284 LLEYGYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~~~---g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl 360 (464)
+|.+||+|||+||.|+++... .-+||+|||++..+.... ...-..+.|..+++++..-.-++..+|+|+.
T Consensus 126 CH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~-------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~c 198 (355)
T KOG0033|consen 126 CHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE-------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 198 (355)
T ss_pred HHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc-------ccccccCCCcccCHHHhhcCCCCCcchhhhh
Confidence 999999999999999999643 349999999999887332 1122234566677777777777999999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCC----CCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHH
Q 012411 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPF----NVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPY 433 (464)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~ 433 (464)
|..++-++.++ .|+.+.+-..+.++|.+..+.++. .+.++...++|-| +.+||.-++++. -+||
T Consensus 199 GViLfiLL~G~--~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrM-------L~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 199 GVILYILLVGY--PPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRM-------LTVNPKKRITADEALKHPW 269 (355)
T ss_pred hHHHHHHHhCC--CCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHH-------hccChhhhccHHHHhCCch
Confidence 99999999865 577776777788888877776665 4567778888888 668998888775 5788
Q ss_pred HHH
Q 012411 434 FAK 436 (464)
Q Consensus 434 ~~~ 436 (464)
+.+
T Consensus 270 i~~ 272 (355)
T KOG0033|consen 270 ICN 272 (355)
T ss_pred hcc
Confidence 644
No 77
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.91 E-value=1.1e-24 Score=216.79 Aligned_cols=207 Identities=14% Similarity=0.152 Sum_probs=129.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|++..+|+.||||+.++..... ..+. +.+.+|.+.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~~~~e~~~-- 54 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK-RAET-----------------------------ACFREERDV-- 54 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhhH-----------------------------HHHHHHHHH--
Confidence 67999999999999998889999999986320000 0000 111111111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (464)
+.. . ++++ ++.++. ......++||||++|++|.++......... ....+..++..++.|+|+.|+
T Consensus 55 ----l~~----~-~~~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (331)
T cd05597 55 ----LVN----G-DRRW--ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY 123 (331)
T ss_pred ----HHh----C-CCCC--CCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 111 1 1222 222222 223557899999999999887543222233 344556778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|||+||+|||++.+|.++|+|||++..+.............+..+..||.+....-..+..+.++|+|++|+.+++++.
T Consensus 124 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 203 (331)
T cd05597 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY 203 (331)
T ss_pred EECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh
Confidence 99999999999999999999999998765432111000001122233444432211112345778999999999999998
Q ss_pred HhccCCCCcCcHHHHH
Q 012411 370 DALNSSVSELNFKTIV 385 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~ 385 (464)
+ ..|+...+..+..
T Consensus 204 g--~~Pf~~~~~~~~~ 217 (331)
T cd05597 204 G--ETPFYAESLVETY 217 (331)
T ss_pred C--CCCCCCCCHHHHH
Confidence 4 4566555544433
No 78
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.91 E-value=4.2e-24 Score=214.62 Aligned_cols=200 Identities=16% Similarity=0.187 Sum_probs=125.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||||+......... .....++.+ ..+....|+|++.+++.+..
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~E~----~~l~~l~h~niv~~~~~~~~---------- 87 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT-HAKRAYREL----VLMKCVNHKNIISLLNVFTP---------- 87 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChH-HHHHHHHHH----HHHHHhCCCchhceeeeeec----------
Confidence 789999999999999988899999998864321110 000111111 11112235665555443211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
....+.....++||||++|+ +.+... ..........+..++..+|.|||+.|++|||
T Consensus 88 ---------------------~~~~~~~~~~~lv~e~~~~~-l~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givHrD 144 (355)
T cd07874 88 ---------------------QKSLEEFQDVYLVMELMDAN-LCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRD 144 (355)
T ss_pred ---------------------cccccccceeEEEhhhhccc-HHHHHh-hcCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 00001113458999999874 433321 1122223334567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
+||+||+++.+|.++|+|||+++....... ....+ ...+..||.+ .....+.++|+||+|+.+++++++
T Consensus 145 ikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~---t~~y~aPE~~-----~~~~~~~~~DiwslG~il~el~~g-- 214 (355)
T cd07874 145 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEVI-----LGMGYKENVDIWSVGCIMGEMVRH-- 214 (355)
T ss_pred CChHHEEECCCCCEEEeeCcccccCCCccccCCccc---cCCccCHHHH-----cCCCCCchhhHHHHHHHHHHHHhC--
Confidence 999999999999999999999987644321 11111 2223344433 333457789999999999999984
Q ss_pred cCCCCcCcH
Q 012411 373 NSSVSELNF 381 (464)
Q Consensus 373 ~~~~~~~~~ 381 (464)
..++...+.
T Consensus 215 ~~pf~~~~~ 223 (355)
T cd07874 215 KILFPGRDY 223 (355)
T ss_pred CCCCCCCCH
Confidence 345555443
No 79
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.91 E-value=1e-24 Score=219.04 Aligned_cols=189 Identities=20% Similarity=0.236 Sum_probs=121.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+|+.||||+........... .+...+..+....|+|++.+.+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~------~~~~E~~~l~~l~h~~iv~~~~-------------- 139 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRR------QICREIEILRDVNHPNVVKCHD-------------- 139 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHH------HHHHHHHHHHhCCCCCcceeee--------------
Confidence 67999999999999998889999999986542221110 1111111111222444333322
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
+....+..++||||++|++|.+.... .......+..++..+|.|||+.|++|+|
T Consensus 140 -----------------------~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~i~~qi~~aL~~LH~~~ivHrD 193 (353)
T PLN00034 140 -----------------------MFDHNGEIQVLLEFMDGGSLEGTHIA---DEQFLADVARQILSGIAYLHRRHIVHRD 193 (353)
T ss_pred -----------------------EeccCCeEEEEEecCCCCcccccccC---CHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence 11223556899999999998754211 1122234567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||+|||++.++.++|+|||++..+..... ....++ ..+..||.+......-.+.+.++|+|++|+.+++++.+.
T Consensus 194 lkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt---~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~ 270 (353)
T PLN00034 194 IKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGT---IAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGR 270 (353)
T ss_pred CCHHHEEEcCCCCEEEcccccceecccccccccccccC---ccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCC
Confidence 999999999999999999999887643211 111122 222334433221111123345799999999999999843
No 80
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.91 E-value=3.1e-25 Score=224.12 Aligned_cols=229 Identities=14% Similarity=0.138 Sum_probs=139.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+|+.||||++....... ..+. .. +..
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~------~~~ 92 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RSDS-----------------------------AF------FWE 92 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhhH-----------------------------HH------HHH
Confidence 67999999999999999899999999986321000 0000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|...+..+ +++++.-..-+.......++||||++|++|.+..............+..++..++.|||+.|++|||
T Consensus 93 e~~il~~~-----~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 167 (370)
T cd05596 93 ERDIMAHA-----NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRD 167 (370)
T ss_pred HHHHHHhC-----CCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 11111111 1222211111222345578999999999998875433223333444567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH----cCCCCCCCCcchHHHHHHHHHH
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA----LDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|||+|||++.+|.++|+|||++..+........ ....+.+.++++++.. .+..+.++|+||+|+.++++++
T Consensus 168 Lkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyellt 242 (370)
T cd05596 168 VKPDNMLLDKSGHLKLADFGTCMKMDANGMVRC-----DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (370)
T ss_pred CCHHHEEEcCCCCEEEEeccceeeccCCCcccC-----CCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHh
Confidence 999999999999999999999877643211000 0011233344444332 1235778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHh--hCC--CCCChHHHHHHHHH
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLY--QYP--FNVPAYYALILRSL 410 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~--~~~p~~~~~l~r~l 410 (464)
+ ..|+...+.......+..... .++ ..+++.+..+++.+
T Consensus 243 G--~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~ 285 (370)
T cd05596 243 G--DTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAF 285 (370)
T ss_pred C--CCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHH
Confidence 4 456665554443333322111 111 13455666666665
No 81
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.91 E-value=1.7e-24 Score=210.18 Aligned_cols=235 Identities=15% Similarity=0.153 Sum_probs=142.2
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||+|+||+||+|.++.+|+.||||+......... . .+ +. +..|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-~----------------------------~~-~~------~~~E~ 44 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR-K----------------------------GY-EG------AMVEK 44 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh-H----------------------------HH-HH------HHHHH
Confidence 6999999999999988999999999864311100 0 00 00 11222
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH---HhcCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI---ESQGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~---~~~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
..+.++ +++.+....-+.......++||||++|++|.+.... .....+.. ..+..++..++.|+|+.|++
T Consensus 45 ~il~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 119 (280)
T cd05608 45 RILAKV-----HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRII 119 (280)
T ss_pred HHHHhC-----CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 222222 122222222222334567899999999999765422 11123333 34557788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||+++.++.++|+|||++..+....... . ...+.+..++++....+..+.++|+|++|+.+++++++
T Consensus 120 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~-~-----~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 193 (280)
T cd05608 120 YRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT-K-----GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAA 193 (280)
T ss_pred cCCCCHHHEEECCCCCEEEeeCccceecCCCCccc-c-----ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhC
Confidence 99999999999999999999999987664322110 0 01122334445555455567789999999999999984
Q ss_pred hccCCCCcCc----HHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 371 ALNSSVSELN----FKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 371 ~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
. .|+...+ ...+...+.......+..+|+.+..+++.+ ...||.-|+
T Consensus 194 ~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~~P~~R~ 244 (280)
T cd05608 194 R--GPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEAL-------LAKDPEKRL 244 (280)
T ss_pred C--CCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHH-------hcCCHHHhc
Confidence 3 3443322 112222111111122334566666666655 456676665
No 82
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2e-24 Score=209.69 Aligned_cols=255 Identities=18% Similarity=0.185 Sum_probs=165.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|.-++||+|+...+++.||||++.-. ....|+..+++- ...+.-..|||++.+...|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLE---kc~~~ld~l~kE---~~~msl~~HPNIv~~~~sFv----------- 94 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLE---KCNNDLDALRKE---VQTMSLIDHPNIVTYHCSFV----------- 94 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehh---hhhhhHHHHHHH---HHHhhhcCCCCcceEEEEEE-----------
Confidence 6799999999999999889999999998522 233343332222 22222234555544332211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-HhcCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
.....|+||.|+.||++.++... -..|++.. ..+.+.+..||.|+|.+|.|
T Consensus 95 --------------------------v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~I 148 (516)
T KOG0582|consen 95 --------------------------VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHI 148 (516)
T ss_pred --------------------------ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCce
Confidence 23677999999999999997543 23444443 34446677899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHH-HHHHHH-HH-HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFAII-GH-VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~-~~~~~~-~~-~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|||+|+|||||+.+|.|+|.|||.+..+-.. .|.... .+ .....+..||.+.+.+ .| ++.++||||||.+..|+
T Consensus 149 HRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~--~G-YdfKaDIwSfGITA~EL 225 (516)
T KOG0582|consen 149 HRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQL--HG-YDFKADIWSFGITACEL 225 (516)
T ss_pred ecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcc--cC-ccchhhhhhhhHHHHHH
Confidence 9999999999999999999999988776332 221111 11 1122333455433322 33 47899999999999999
Q ss_pred HHHhccCCCCcCc-HHHHHHHHHHHHhhCC-CCCC-hHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHH
Q 012411 368 FDDALNSSVSELN-FKTIVDGLGAVLYQYP-FNVP-AYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAK 436 (464)
Q Consensus 368 ~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~-~~~p-~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~ 436 (464)
..+ ..|+..+. ++.++..+..-..... ..++ ......-+++..+-+.|+.-||..+.++. -++|+++
T Consensus 226 A~G--~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~ 298 (516)
T KOG0582|consen 226 AHG--HAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKK 298 (516)
T ss_pred hcC--CCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhh
Confidence 984 46777765 3433333321100000 0222 23455566777778899999999998887 5666654
No 83
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.91 E-value=1.4e-23 Score=207.64 Aligned_cols=234 Identities=20% Similarity=0.198 Sum_probs=148.2
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|+||.||+|+++.+|+.||||+++...... ..+... +..|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~-----------------------------------~~~e 45 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDDVEC-----------------------------------TMTE 45 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHHH-----------------------------------HHHH
Confidence 5899999999999998889999999987432110 000000 0011
Q ss_pred HHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
...+. ...++++ +++++. ......++||||++|++|.+..... ...+. ...+..++..++.|||+.|++
T Consensus 46 ~~il~----~~~~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~iv 118 (318)
T cd05570 46 KRVLA----LAGKHPF--LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGII 118 (318)
T ss_pred HHHHH----hccCCCC--ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 11111 1112222 222222 2235578999999999997664322 22333 344557788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
|+|+||+||+++.+|.++|+|||+++..... .....+ +.+.+++++.......+.++|+|++|+.+++++
T Consensus 119 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~ 190 (318)
T cd05570 119 YRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC--------GTPDYIAPEILSYQPYGPAVDWWALGVLLYEML 190 (318)
T ss_pred ccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee--------cCccccCHHHhcCCCCCcchhhhhHHHHHHHHh
Confidence 9999999999999999999999998653211 111111 233344444444455678899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHH
Q 012411 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA 428 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~ 428 (464)
++ ..|+...+...+...+.......+..+|+.+..+++.+ ...||+-|+..
T Consensus 191 ~G--~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~-------l~~dP~~R~s~ 241 (318)
T cd05570 191 AG--QSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSF-------LTKNPEKRLGC 241 (318)
T ss_pred hC--CCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHH-------ccCCHHHcCCC
Confidence 84 45666555555444443322234445667777777666 66777777654
No 84
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.91 E-value=8e-25 Score=217.56 Aligned_cols=245 Identities=16% Similarity=0.187 Sum_probs=147.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|..+.+|+.||||+.+...... .... +.+.+|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~~~~e----- 51 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA-QETV-----------------------------SFFEEE----- 51 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------HHHHHH-----
Confidence 67999999999999999899999999987431100 0000 011111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
...+. .. +++.+....-+.......++||||++|++|.++.......++ ....+..++..++.|+|+.|++|
T Consensus 52 -~~i~~----~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H 125 (330)
T cd05601 52 -RDILS----IS-NSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVH 125 (330)
T ss_pred -HHHHH----hC-CCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 11111 11 122221111112223567899999999999887544323333 33445577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH------cCCCCCCCCcchHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA------LDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~D~~sl~~~l~ 365 (464)
|||||+||+++.+|.++|+|||++..+........ ....+.+.+++++++. .+..+.++|+|++|+.++
T Consensus 126 ~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 200 (330)
T cd05601 126 RDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS-----KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAY 200 (330)
T ss_pred ccCchHheEECCCCCEEeccCCCCeECCCCCceee-----ecccCCccccCHHHhccccccccCCCCCcceeecccceee
Confidence 99999999999999999999999987654321100 0011223333444432 234567899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHh--hCC--CCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHH
Q 012411 366 NFFDDALNSSVSELNFKTIVDGLGAVLY--QYP--FNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYF 434 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~--~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~ 434 (464)
+++++ ..|+...+.......+..... .++ ..+++.+..+++.+ .. +|.-|+... .+||+
T Consensus 201 el~~g--~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~l-------l~-~p~~R~t~~~l~~h~~~ 266 (330)
T cd05601 201 EMIYG--RSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSL-------LC-GQKERLGYEGLCCHPFF 266 (330)
T ss_pred eeccC--CCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHH-------cc-ChhhCCCHHHHhCCCCc
Confidence 99974 455555444333333322111 111 23556666666555 33 666555443 45664
No 85
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.90 E-value=5.3e-24 Score=211.96 Aligned_cols=225 Identities=16% Similarity=0.153 Sum_probs=157.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|-||.||.|++. ...+||||.++++... +-+|..
T Consensus 212 ~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~----------------------------------------~~~f~~ 250 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS----------------------------------------PEAFLR 250 (468)
T ss_pred HHhcCCccceEEEEEEc-CCCcccceEEeccccC----------------------------------------hhHHHH
Confidence 56999999999999996 5559999999876211 123445
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-HhcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
||.-+.++++. .+.--.-+.....+.+|||||++.|+|.++... ....+.. ...+..||+.|++||.++++|
T Consensus 251 Ea~iMk~L~H~-----~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~I 325 (468)
T KOG0197|consen 251 EAQIMKKLRHE-----KLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYI 325 (468)
T ss_pred HHHHHHhCccc-----CeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCcc
Confidence 55555555431 121111122222357999999999999998665 2222333 334567888999999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||||-..||||++++.+||+|||+++.+.++....-.+. .-...+.+++....|..+.++|+||||..|+|+++.
T Consensus 326 HRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~-----kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~ 400 (468)
T KOG0197|consen 326 HRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGG-----KFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTY 400 (468)
T ss_pred chhhhhhheeeccCceEEEcccccccccCCCceeecCCC-----CCCceecCHHHHhhCCcccccceeehhhhHHHHhcc
Confidence 999999999999999999999999996655432111111 011223345555677789999999999999999994
Q ss_pred hccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHHHHH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALILRSL 410 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l 410 (464)
+..|...++..++++.+.+.-+ ..|-..|+++-.+++..
T Consensus 401 -G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 401 -GRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSC 440 (468)
T ss_pred -CCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence 6677788898888887765433 33556777776666554
No 86
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.90 E-value=1.9e-23 Score=207.50 Aligned_cols=237 Identities=18% Similarity=0.161 Sum_probs=145.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|.+..+|+.||||+.+...... ..+. +.+..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~~~~------ 44 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DEDI-----------------------------DWVQT------ 44 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH-----------------------------HHHHH------
Confidence 35999999999999998889999999987432110 0000 01111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|...+ ....+++.+..........+..++||||++|++|.+..... .........+..++..++.|||+.|++||
T Consensus 45 e~~~~----~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHr 120 (327)
T cd05617 45 EKHVF----EQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120 (327)
T ss_pred HHHHH----HhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 11111 11222333322222223345679999999999997654321 12233344556778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPE--EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||||+|||++.+|.++|+|||++..... ......+ +.+..++++....+..+.++|+|++|+.+++++++
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g 192 (327)
T cd05617 121 DLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC--------GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAG 192 (327)
T ss_pred CCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc--------CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhC
Confidence 9999999999999999999999875321 1111122 22334444444445567889999999999999984
Q ss_pred hccCCCCc------CcHHHHH-HHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 371 ALNSSVSE------LNFKTIV-DGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 371 ~~~~~~~~------~~~~~~~-~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
. .|+.. .+..... ..+.......+..+++.+..+++.+ ...||.-|+.
T Consensus 193 ~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~-------L~~dP~~R~~ 247 (327)
T cd05617 193 R--SPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGF-------LNKDPKERLG 247 (327)
T ss_pred C--CCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-------hccCHHHcCC
Confidence 3 44421 1111111 1221111223444556667777776 5567766653
No 87
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.90 E-value=6.5e-25 Score=220.97 Aligned_cols=210 Identities=16% Similarity=0.181 Sum_probs=134.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|..+.+|+.||||+++...... .+....+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~~~~~~~~~e~---- 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE------------------------------KEQVAHIRAER---- 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh------------------------------hhhHHHHHHHH----
Confidence 68999999999999998899999999986321000 00001111222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
..+.+ + +++++ ++.+. ......++||||++|++|.+..... .........+..++..++.|||+.|++
T Consensus 53 --~~l~~----l-~~~~i--v~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~giv 123 (360)
T cd05627 53 --DILVE----A-DGAWV--VKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFI 123 (360)
T ss_pred --HHHHh----C-CCCCE--eeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 11111 1 12322 22222 2345679999999999998874322 122334455667888899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHH-----------------------------HHHHHHhcCHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-----------------------------HVVHMVNRDYEAM 341 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~-----------------------------~~~~~~~~~~~~~ 341 (464)
||||||+|||++.+|.++|+|||++..+.......... .......+.+..+
T Consensus 124 HrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 203 (360)
T cd05627 124 HRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYI 203 (360)
T ss_pred ccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcccc
Confidence 99999999999999999999999987653321100000 0000112344555
Q ss_pred HHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 012411 342 ARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 342 ~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (464)
++++......+.++|+||+|+.+++++++ ..|+...+.......+
T Consensus 204 APE~~~~~~~~~~~DiwSlGvilyel~tG--~~Pf~~~~~~~~~~~i 248 (360)
T cd05627 204 APEVFMQTGYNKLCDWWSLGVIMYEMLIG--YPPFCSETPQETYRKV 248 (360)
T ss_pred CHHHHcCCCCCCcceeccccceeeecccC--CCCCCCCCHHHHHHHH
Confidence 56555445567889999999999999984 3566555544444333
No 88
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.8e-24 Score=229.50 Aligned_cols=225 Identities=15% Similarity=0.195 Sum_probs=154.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHH-HHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAI-GLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~-~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.||.|+||.|+.++++.+++.+|+|++... .-+ ..|.+. +.+|-|.+
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~--eMlKr~~tA~-----------------------------F~EERDim 129 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKW--EMLKRAETAC-----------------------------FREERDIM 129 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHH--HHhhchhHHH-----------------------------HHHHhHHH
Confidence 7899999999999999999999999987531 000 111111 11222222
Q ss_pred HH--HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCc
Q 012411 213 QE--GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 213 ~E--a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi 289 (464)
.- -.=+.++.-.|++..++ |+||||++||+|-.+..... .+.+.++++...+..|+.-+|+.|+
T Consensus 130 v~~ns~Wiv~LhyAFQD~~~L-------------YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgy 196 (1317)
T KOG0612|consen 130 VFGNSEWIVQLHYAFQDERYL-------------YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGY 196 (1317)
T ss_pred HcCCcHHHHHHHHHhcCccce-------------EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccc
Confidence 11 11233445556666555 49999999999987644333 5567788888888899999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH-----cCCCCCCCCcchHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA-----LDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~D~~sl~~~l 364 (464)
||||+||.|||++..|+|+|+|||.+-.+..+-... ...+-|.|+++.+++.. .|.+++++|.||+|..+
T Consensus 197 VHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~-----s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~ 271 (1317)
T KOG0612|consen 197 VHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR-----SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFM 271 (1317)
T ss_pred eeccCCcceeEecccCcEeeccchhHHhcCCCCcEE-----eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHH
Confidence 999999999999999999999999998876542110 12234556666655532 36778999999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHh-----hCC--CCCChHHHHHHHHHHH
Q 012411 365 RNFFDDALNSSVSELNFKTIVDGLGAVLY-----QYP--FNVPAYYALILRSLTV 412 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~--~~~p~~~~~l~r~l~~ 412 (464)
|||+- +..||-..+ +++.-++++. .+| ..++++...+++++++
T Consensus 272 YEMly--G~TPFYads---lveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~ 321 (1317)
T KOG0612|consen 272 YEMLY--GETPFYADS---LVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC 321 (1317)
T ss_pred HHHHc--CCCcchHHH---HHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc
Confidence 99996 456665444 3444444443 233 3455666777777643
No 89
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.90 E-value=3.2e-24 Score=218.18 Aligned_cols=181 Identities=15% Similarity=0.189 Sum_probs=119.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||+|+.... ....++.+++ .+.|+|++++.+.
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~---~~~~E~~il~----------~l~HpnIv~~~~~------------- 151 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQRG---GTATEAHILR----------AINHPSIIQLKGT------------- 151 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhhh---hhHHHHHHHH----------hCCCCCCCCEeEE-------------
Confidence 7799999999999999989999999975321 1112222222 1235554443321
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.......++|||++.| +|.+.... ....+. ...+..++..+|.|+|+.||+|
T Consensus 152 ------------------------~~~~~~~~lv~e~~~~-~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvH 205 (391)
T PHA03212 152 ------------------------FTYNKFTCLILPRYKT-DLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIH 205 (391)
T ss_pred ------------------------EEECCeeEEEEecCCC-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 1123456899999965 55554322 223333 3345577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||||+|||++.+|.++|+|||++............+...+..+..||. ...+..++++|+||+|+.+++++++.
T Consensus 206 rDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~-----~~~~~~~~~~DiwSlGvil~elltg~ 280 (391)
T PHA03212 206 RDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPEL-----LARDPYGPAVDIWSAGIVLFEMATCH 280 (391)
T ss_pred CCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhh-----hcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999987543211111111111223334443 33344578899999999999999853
No 90
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.90 E-value=3e-23 Score=203.69 Aligned_cols=144 Identities=17% Similarity=0.179 Sum_probs=100.5
Q ss_pred CCCceEEEeeecCcccCcHHHHHhc--------------------CCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceE
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQ--------------------GLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLL 300 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~--------------------~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nil 300 (464)
.+..+++|||++|++|.++...... .......+..++..++.|+|+.|++|+|+||+|||
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nil 170 (304)
T cd05096 91 EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCL 170 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheE
Confidence 4567999999999999886533211 01122345677888999999999999999999999
Q ss_pred EccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc
Q 012411 301 ATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 301 i~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
++.++.++|+|||++..+.........+ ........++++.+..+..+.++|+||+|+.+++++......|+...+
T Consensus 171 l~~~~~~kl~DfG~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 246 (304)
T cd05096 171 VGENLTIKIADFGMSRNLYAGDYYRIQG----RAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELT 246 (304)
T ss_pred EcCCccEEECCCccceecccCceeEecC----cCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCC
Confidence 9999999999999988653321110111 011122334455555566788999999999999999765566776666
Q ss_pred HHHHHHHH
Q 012411 381 FKTIVDGL 388 (464)
Q Consensus 381 ~~~~~~~l 388 (464)
..+++..+
T Consensus 247 ~~~~~~~~ 254 (304)
T cd05096 247 DEQVIENA 254 (304)
T ss_pred HHHHHHHH
Confidence 55554443
No 91
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.90 E-value=1.4e-23 Score=208.83 Aligned_cols=189 Identities=19% Similarity=0.172 Sum_probs=122.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|++..+|+.||+|+.+...... ..+.. .+..|....
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~-----------------------------~~~~E~~~l- 49 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND-DEDID-----------------------------WVQTEKHVF- 49 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc-hhHHH-----------------------------HHHHHHHHH-
Confidence 36999999999999999899999999987432111 00000 011111110
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
....+++++.-..-+....+..++||||++|++|.+.... ....+ ....+..++..++.|+|+.|++|
T Consensus 50 ---------~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH 119 (329)
T cd05618 50 ---------EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIY 119 (329)
T ss_pred ---------HhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 0111122221111112234567899999999999765332 22233 33445677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|||||+||+++.+|.++|+|||++...... .....+ +.+..++++....+..+.++|+||+|+.++++++
T Consensus 120 ~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~--------gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 191 (329)
T cd05618 120 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC--------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 191 (329)
T ss_pred CCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc--------CCccccCHHHHcCCCCCCccceecccHHHHHHhh
Confidence 999999999999999999999998753211 111122 2233344444444555778999999999999998
Q ss_pred Hh
Q 012411 370 DA 371 (464)
Q Consensus 370 ~~ 371 (464)
+.
T Consensus 192 g~ 193 (329)
T cd05618 192 GR 193 (329)
T ss_pred CC
Confidence 53
No 92
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.90 E-value=8.1e-24 Score=212.90 Aligned_cols=199 Identities=17% Similarity=0.193 Sum_probs=122.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||||+......... .....++.+ ..+....|+|++.+++.+...
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~----~~l~~l~h~niv~~~~~~~~~--------- 92 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT-HAKRAYREL----VLLKCVNHKNIISLLNVFTPQ--------- 92 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchh-HHHHHHHHH----HHHHhCCCCCEeeeeeeeccC---------
Confidence 789999999999999988899999999864321110 000111111 111122344444443321100
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
. ........++||||++|+ +.+... ..........+..++..++.|||+.|++|||
T Consensus 93 ---------------~-------~~~~~~~~~lv~e~~~~~-l~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrD 148 (359)
T cd07876 93 ---------------K-------SLEEFQDVYLVMELMDAN-LCQVIH-MELDHERMSYLLYQMLCGIKHLHSAGIIHRD 148 (359)
T ss_pred ---------------C-------CccccceeEEEEeCCCcC-HHHHHh-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 0 000113458999999874 333221 1122223334567888899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
|||+||+++.+|.++|+|||++........ ....+ +..+..||.+ .....+.++|+||+|+.+++++++
T Consensus 149 lkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~---t~~y~aPE~~-----~~~~~~~~~DiwSlG~il~el~tg-- 218 (359)
T cd07876 149 LKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV---TRYYRAPEVI-----LGMGYKENVDIWSVGCIMGELVKG-- 218 (359)
T ss_pred CCHHHEEECCCCCEEEecCCCccccccCccCCCCcc---cCCCCCchhc-----cCCCCCcchhhHHHHHHHHHHHhC--
Confidence 999999999999999999999876533211 01111 1223344433 333457789999999999999984
Q ss_pred cCCCCcCc
Q 012411 373 NSSVSELN 380 (464)
Q Consensus 373 ~~~~~~~~ 380 (464)
..++...+
T Consensus 219 ~~pf~~~~ 226 (359)
T cd07876 219 SVIFQGTD 226 (359)
T ss_pred CCCCCCCC
Confidence 34554443
No 93
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.90 E-value=3.7e-24 Score=216.82 Aligned_cols=207 Identities=16% Similarity=0.146 Sum_probs=129.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|....+|+.||||++...... . ...+ +.+..|+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~--~~~~--------------------------~~~~~E~---- 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF--K--KDQL--------------------------AHVKAER---- 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH--H--hHHH--------------------------HHHHHHH----
Confidence 6799999999999999989999999998532100 0 0000 1111121
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
..+.+ + ++++ +++++. ......++||||++|++|.+...... ........+..++..+|.|||+.|++
T Consensus 53 --~il~~----l-~hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~giv 123 (377)
T cd05629 53 --DVLAE----S-DSPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFI 123 (377)
T ss_pred --HHHHh----C-CCCC--cceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 11111 1 1222 222222 23456799999999999987643211 12223344567888899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-----------------------------------HH------HH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-----------------------------------II------GH 329 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-----------------------------------~~------~~ 329 (464)
||||||+|||++.+|.++|+|||+++.+....... .. ..
T Consensus 124 HrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T cd05629 124 HRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL 203 (377)
T ss_pred ccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc
Confidence 99999999999999999999999986432110000 00 00
Q ss_pred HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 012411 330 VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (464)
......+.+.+++++++.....+.++|+||+|+.+++++++. .|+...+..+..
T Consensus 204 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~--~Pf~~~~~~~~~ 257 (377)
T cd05629 204 MAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGW--PPFCSENSHETY 257 (377)
T ss_pred cccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCC--CCCCCCCHHHHH
Confidence 000012334455555554445578899999999999999843 455444433333
No 94
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.90 E-value=1.8e-24 Score=213.90 Aligned_cols=236 Identities=16% Similarity=0.170 Sum_probs=147.5
Q ss_pred cccccceecEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|+||.||+++.. .+|+.||||+++...... .+. ..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~~~-----------------------------------~~ 44 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--RDR-----------------------------------VR 44 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--hhH-----------------------------------HH
Confidence 56999999999999863 478999999986421110 000 00
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~g 288 (464)
+..|...+.++ +++++.-..-+.......++||||++|++|.+.... ....+ ....+..++..++.|||+.|
T Consensus 45 ~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ 118 (318)
T cd05582 45 TKMERDILAEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLG 118 (318)
T ss_pred HHHHHHHHHhC-----CCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11122222211 112211111111223566899999999999776432 22233 33445577888999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++|+||||+||+++.+|.++|+|||++........... ...+.+..++++.......+.++|+|++|+.+++++
T Consensus 119 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 192 (318)
T cd05582 119 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY------SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML 192 (318)
T ss_pred EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee------cccCChhhcCHHHHcCCCCCCccceeccceEeeeec
Confidence 99999999999999999999999999876533211100 111233444444444444577899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
++ ..|+...+.......+.......+..+++.+..+++.+ ...||.-|+.
T Consensus 193 tg--~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~-------l~~~P~~R~~ 242 (318)
T cd05582 193 TG--SLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRAL-------FKRNPANRLG 242 (318)
T ss_pred cC--CCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH-------hhcCHhHcCC
Confidence 83 45665555444444443333334445667777777766 5667776654
No 95
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=9.9e-24 Score=197.15 Aligned_cols=225 Identities=14% Similarity=0.150 Sum_probs=155.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHH-HHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFY-LIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~-~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.+|+|.||.|-.++.+.+|+-+|+|+++..+.-.- .+++ .+.. .+. +.+-.||-+..+--.
T Consensus 174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiak-dEVAHTlTE-~RV---L~~~~HPFLt~LKYs------------ 236 (516)
T KOG0690|consen 174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAK-DEVAHTLTE-NRV---LQNCRHPFLTSLKYS------------ 236 (516)
T ss_pred HHhcCCccceEEEEeecccCceeehhhhhhhheeeh-HHhhhhhhH-HHH---HHhccCcHHHHhhhh------------
Confidence 789999999999999999999999999876532110 0000 0000 000 011123322222222
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|+. ..+.|+||||..||.|.-... .+-...+..+.+...|.++|.|||+.+|+.
T Consensus 237 ------------FQt-------------~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivY 291 (516)
T KOG0690|consen 237 ------------FQT-------------QDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVY 291 (516)
T ss_pred ------------hcc-------------CceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeee
Confidence 211 245689999999999975433 233456777888888999999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcC-C-HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSET-P-EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
||+|-+|+|++.||+|||.|||+++.- . .....++|| .||++++++.+-.-++..+|.|.+|..||+|++
T Consensus 292 RDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCG--------TPEYLAPEVleDnDYgraVDWWG~GVVMYEMmC 363 (516)
T KOG0690|consen 292 RDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCG--------TPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMC 363 (516)
T ss_pred eechhhhheeccCCceEeeecccchhcccccceeccccC--------ChhhcCchhhccccccceeehhhhhHHHHHHHh
Confidence 999999999999999999999999862 2 223344555 488888888776666889999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
+ ..|+.+.+...+.+-|...-.++|-.+.|+...++-.+
T Consensus 364 G--RLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGL 402 (516)
T KOG0690|consen 364 G--RLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGL 402 (516)
T ss_pred c--cCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHH
Confidence 4 45666555555555554443455666666655555544
No 96
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.90 E-value=1.6e-24 Score=211.28 Aligned_cols=205 Identities=16% Similarity=0.182 Sum_probs=126.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|....+|+.||+|+.+....... . .. +.+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~------------------------------~~------~~~ 52 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA--P------------------------------CT------AIR 52 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc--c------------------------------hh------HHH
Confidence 679999999999999988999999999864311100 0 00 011
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ +++++.-..-+.......++||||++| +|.+.........+ ....+..++..++.+||+.|++|
T Consensus 53 E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH 126 (288)
T cd07871 53 EVSLLKNL-----KHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILH 126 (288)
T ss_pred HHHHHHhC-----CCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 11111111 122222111112223456899999987 67665332222223 33445678888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
||+||+|||++.+|.++|+|||++......... .........+..||.+. .....+.++|+||+|+.+++++++
T Consensus 127 ~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~~l~~l~~g- 200 (288)
T cd07871 127 RDLKPQNLLINEKGELKLADFGLARAKSVPTKT-YSNEVVTLWYRPPDVLL----GSTEYSTPIDMWGVGCILYEMATG- 200 (288)
T ss_pred CCCCHHHEEECCCCCEEECcCcceeeccCCCcc-ccCceecccccChHHhc----CCcccCcHHHHHHHHHHHHHHHhC-
Confidence 999999999999999999999998764322110 01111122333444331 112346779999999999999984
Q ss_pred ccCCCCcCcHHHHHHHHH
Q 012411 372 LNSSVSELNFKTIVDGLG 389 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~ 389 (464)
..++...+..+.+..+.
T Consensus 201 -~~pf~~~~~~~~~~~~~ 217 (288)
T cd07871 201 -RPMFPGSTVKEELHLIF 217 (288)
T ss_pred -CCCCCCCCHHHHHHHHH
Confidence 35555555544444443
No 97
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.90 E-value=3.4e-24 Score=213.26 Aligned_cols=191 Identities=20% Similarity=0.246 Sum_probs=125.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|++..+|..||+|+.+....... ...+.+|++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~--------------------------------~~~~~~E~~--- 55 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAI--------------------------------RNQIIRELQ--- 55 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHH--------------------------------HHHHHHHHH---
Confidence 679999999999999998999999999875422111 111112221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHC-C
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEY-G 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~-g 288 (464)
.+.++ . +++ +.+++. ......++||||++|++|.++.... ...+ ....+..++..++.|+|+. |
T Consensus 56 ---~l~~l----~-h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ 124 (331)
T cd06649 56 ---VLHEC----N-SPY--IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQ 124 (331)
T ss_pred ---HHHHC----C-CCC--CCeEEEEEEECCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 11111 1 111 111111 2235578999999999998875432 2233 3334556778899999985 6
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++|+|+||+||+++.+|.++|+|||++..+......... +.+..++++....+..+.++|+||+|+.+++++
T Consensus 125 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 196 (331)
T cd06649 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA 196 (331)
T ss_pred EEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC--------CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHH
Confidence 999999999999999999999999999876543222222 222233334444445678899999999999999
Q ss_pred HHhccCCCCcCc
Q 012411 369 DDALNSSVSELN 380 (464)
Q Consensus 369 ~~~~~~~~~~~~ 380 (464)
++. .|+...+
T Consensus 197 tg~--~p~~~~~ 206 (331)
T cd06649 197 IGR--YPIPPPD 206 (331)
T ss_pred hCC--CCCCCCC
Confidence 843 4444333
No 98
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.90 E-value=1.9e-23 Score=203.30 Aligned_cols=197 Identities=17% Similarity=0.198 Sum_probs=126.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|....+|+.||||++......... .+..+.+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~~~~ 49 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK------------------------------------GEAMALN 49 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhh------------------------------------hHHHHHH
Confidence 6799999999999999888999999998643211100 0111122
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|+..+.++. ++++.-..-........++||||++|++|.+...... ...+. ...+..++..++.|+|+.|++
T Consensus 50 E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 124 (285)
T cd05605 50 EKQILEKVN-----SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIV 124 (285)
T ss_pred HHHHHHhcC-----CCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 222222221 1222111111122345789999999999987643221 22333 334457788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||.||++++++.++|+|||++..+...... .... +.+..++++...-+..+.++|+|++|+.+++++++
T Consensus 125 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--~~~~-----~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g 197 (285)
T cd05605 125 YRDLKPENILLDDYGHIRISDLGLAVEIPEGETI--RGRV-----GTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG 197 (285)
T ss_pred ecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc--cccc-----CCCCccCcHHhcCCCCCccccchhHHHHHHHHHHC
Confidence 9999999999999999999999998876432210 0001 12222333343344457789999999999999984
Q ss_pred hccCCCCcCc
Q 012411 371 ALNSSVSELN 380 (464)
Q Consensus 371 ~~~~~~~~~~ 380 (464)
..|+...+
T Consensus 198 --~~pf~~~~ 205 (285)
T cd05605 198 --KSPFRQRK 205 (285)
T ss_pred --CCCCCCCc
Confidence 45555444
No 99
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=3.2e-24 Score=210.77 Aligned_cols=224 Identities=17% Similarity=0.185 Sum_probs=168.4
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHH-----HHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA-----IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~-----~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 207 (464)
++-||+|-|+.|-.|++.-+|+.|||||+.....+. +-.+++.|+.+ .|+|++.+++.+.
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV----------QHpNiVRLYEViD----- 87 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV----------QHPNIVRLYEVID----- 87 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh----------cCcCeeeeeehhc-----
Confidence 478999999999999999999999999997553322 11222222221 3555555554332
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC--CCHHHHHHHHHHHHHHHHH
Q 012411 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNTGIQCSLRQLL 285 (464)
Q Consensus 208 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~~i~~~l~~lh 285 (464)
..+..||++|.-+||+|.|++-....| .+..+.+..||..++.|+|
T Consensus 88 --------------------------------TQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH 135 (864)
T KOG4717|consen 88 --------------------------------TQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH 135 (864)
T ss_pred --------------------------------ccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh
Confidence 247889999999999999987655555 4567788899999999999
Q ss_pred HCCcccCCCCCcceEEc-cCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 286 EYGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~-~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
...++|||+||+|+.+- .-|-+||.|||++-.+.+..+ .+.|| .+++-.||.+..+- |..|.+|+|++|.+
T Consensus 136 qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCG---SLAYSAPEILLGDs----YDAPAVDiWSLGVI 208 (864)
T KOG4717|consen 136 QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCG---SLAYSAPEILLGDS----YDAPAVDIWSLGVI 208 (864)
T ss_pred hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccc---hhhccCchhhhcCc----cCCcchhhhHHHHH
Confidence 99999999999999876 568899999999988866543 34555 45566677665443 45889999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH
Q 012411 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV 412 (464)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~ 412 (464)
+|.++. ...|+...+-.+.+..|...-|..|-.+..++..++.+|+.
T Consensus 209 LyMLVC--Gq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLv 255 (864)
T KOG4717|consen 209 LYMLVC--GQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLV 255 (864)
T ss_pred HHHHHh--CCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHh
Confidence 999998 56788877766666666666666677777777778777753
No 100
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1e-23 Score=220.63 Aligned_cols=254 Identities=15% Similarity=0.154 Sum_probs=153.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+|+.||||++....... .+.. .+...+..+....|++++.+.+.+...
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~--~~~~---~~~~Ei~~l~~~~h~~iv~~~~~~~~~--------- 103 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE--ADKN---RAQAEVCCLLNCDFFSIVKCHEDFAKK--------- 103 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH--HHHH---HHHHHHHHHhcCCCCcEEEeecceecc---------
Confidence 78999999999999998899999999986432110 0000 000000011111222222211111000
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---cCCCH--HHHHHHHHHHHHHHHHHCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKV--LDLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~--~~~~~~~i~~~l~~lh~~g 288 (464)
+ . .........++||||++|++|.+...... ..+.. ...+..++..++.|+|+.|
T Consensus 104 -------------~-~------~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~ 163 (496)
T PTZ00283 104 -------------D-P------RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH 163 (496)
T ss_pred -------------c-c------cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 0 0 00000112469999999999988654221 12332 3345567888999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++||||||+|||++.++.++|+|||+++.+......... ....+.+.+++++.+..+..+.++|+||+|+.+++++
T Consensus 164 IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~----~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLl 239 (496)
T PTZ00283 164 MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVG----RTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL 239 (496)
T ss_pred EecCCCCHHHEEEeCCCCEEEEecccCeecccccccccc----ccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998765432111100 0112233444555555555678899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHH
Q 012411 369 DDALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYF 434 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~ 434 (464)
+ ...|+...+..++...+..... ..+..+|+.+..+++.+ ...||+.|+... .+|++
T Consensus 240 t--G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~-------L~~dP~~RPs~~ell~~p~~ 300 (496)
T PTZ00283 240 T--LKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTAL-------LSSDPKRRPSSSKLLNMPIC 300 (496)
T ss_pred H--CCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH-------cccChhhCcCHHHHHhCHHH
Confidence 8 4456766666555544332211 23445677777777766 567787776543 34553
No 101
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.90 E-value=4.4e-24 Score=216.70 Aligned_cols=203 Identities=15% Similarity=0.173 Sum_probs=127.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|+...+|+.||||++....... ......+.+|++.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~------------------------------~~~~~~~~~E~~i-- 54 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLL------------------------------RNQVAHVKAERDI-- 54 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhh------------------------------HHHHHHHHHHHHH--
Confidence 68999999999999998899999999986321000 0000111222221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
+.++ ++++ +++++. ......++||||++|++|.+...... ........+..++..++.|+|+.||+
T Consensus 55 ----l~~~-----~h~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~iv 123 (382)
T cd05625 55 ----LAEA-----DNEW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFI 123 (382)
T ss_pred ----HHhC-----CCCc--CCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1111 1122 222222 22345799999999999987643221 12233445567788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHH--------------------------------------HHHH---HHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEA--------------------------------------RFAI---IGH 329 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--------------------------------------~~~~---~~~ 329 (464)
||||||+|||++.+|.++|+|||++..+.... +... ...
T Consensus 124 HrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (382)
T cd05625 124 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRC 203 (382)
T ss_pred cCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence 99999999999999999999999975331000 0000 000
Q ss_pred HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcH
Q 012411 330 VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNF 381 (464)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~ 381 (464)
......+.+.+++++++.....+.++|+||+||.+++++++ ..|+...+.
T Consensus 204 ~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG--~~Pf~~~~~ 253 (382)
T cd05625 204 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG--QPPFLAQTP 253 (382)
T ss_pred cccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhC--CCCCCCCCH
Confidence 00001233444555554444457889999999999999984 455555443
No 102
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.90 E-value=6.3e-24 Score=214.77 Aligned_cols=210 Identities=18% Similarity=0.196 Sum_probs=129.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|.+..+|+.||||+........ ...+.+.+.+..+....|+|++.+++.+...
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------- 71 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNL-----VSCKRVFRELKMLCFFKHDNVLSALDILQPP--------- 71 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccch-----HHHHHHHHHHHHHHhCCCCCcCCHhheecCC---------
Confidence 67999999999999998899999999875432111 1111111222222233466666655532210
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
. . ......++||||+.+ +|.+... ....++ ....+..++..+|.|+|+.|++|
T Consensus 72 ---------------~-------~-~~~~~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 126 (372)
T cd07853 72 ---------------H-------I-DPFEEIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILH 126 (372)
T ss_pred ---------------C-------c-cccceEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 0 0 001245799999975 5544322 112233 33455678888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||||+|||++.++.++|+|||++...................+..||.+.. ....+.++|+|++|+.+++++++
T Consensus 127 ~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~il~el~~g- 201 (372)
T cd07853 127 RDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG----SRHYTSAVDIWSVGCIFAELLGR- 201 (372)
T ss_pred CCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcC----CCCCCcHHHHHhHHHHHHHHHcC-
Confidence 9999999999999999999999987653321111111111122334443311 12346789999999999999984
Q ss_pred ccCCCCcCcHHHHHHHH
Q 012411 372 LNSSVSELNFKTIVDGL 388 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l 388 (464)
..++...+....+..+
T Consensus 202 -~~pf~~~~~~~~~~~i 217 (372)
T cd07853 202 -RILFQAQSPIQQLDLI 217 (372)
T ss_pred -CCCCCCCCHHHHHHHH
Confidence 4555555444333333
No 103
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.90 E-value=3.9e-23 Score=205.59 Aligned_cols=239 Identities=15% Similarity=0.147 Sum_probs=143.0
Q ss_pred cccccceecEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|+||.||+|+.. .+|+.||+|+........ +.. ..+.+..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---~~~--------------------------~~~~~~~--- 53 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ---KAK--------------------------TVEHTRT--- 53 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh---hhh--------------------------HHHHHHH---
Confidence 67999999999999864 368999999986321100 000 0011111
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~g 288 (464)
|...+. .+.+++.+.....+.......++||||++|++|.+.... ....+ ....+..++..++.|||+.|
T Consensus 54 ---e~~~l~----~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ 125 (332)
T cd05614 54 ---ERNVLE----HVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLG 125 (332)
T ss_pred ---HHHHHH----hccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 111111 222333333222223334567899999999999876432 22233 33445567888999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~D~~sl~~~l~~~ 367 (464)
++||||||+|||++.+|.++|+|||++............. ..+.+..++++.... ...+.++|+|++|+.++++
T Consensus 126 ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el 200 (332)
T cd05614 126 IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYS-----FCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFEL 200 (332)
T ss_pred cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCcccc-----ccCCccccCHHHhcCCCCCCCccccccchhhhhhh
Confidence 9999999999999999999999999988653221110000 112233344443322 2246789999999999999
Q ss_pred HHHhccCCCCcC----cHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 368 FDDALNSSVSEL----NFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 368 ~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
+++. .|+... ....+...+.......+..+++.+..+++.+ ...||+-|+
T Consensus 201 ltg~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~dp~~R~ 254 (332)
T cd05614 201 LTGA--SPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKL-------LRKDPKKRL 254 (332)
T ss_pred hcCC--CCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH-------cCCCHHHcC
Confidence 9853 343221 2222222222222223334566666666665 667787776
No 104
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.90 E-value=1.2e-23 Score=209.30 Aligned_cols=210 Identities=14% Similarity=0.102 Sum_probs=130.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+++++.+++.||+|+........ . .....+.+|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~--~----------------------------~~~~~~~~e~---- 52 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK--R----------------------------AETACFREER---- 52 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHH--h----------------------------hHHHHHHHHH----
Confidence 67999999999999998889999999975210000 0 0000011111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
..+. .. +++.+.-...........++||||++|++|.++........+ ....+..++..++.++|+.|++|
T Consensus 53 --~~l~----~~-~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH 125 (332)
T cd05623 53 --DVLV----NG-DNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125 (332)
T ss_pred --HHHh----hC-CCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 1111 11 223332222222334567999999999999887543222333 34455677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||||+|||++.++.++|+|||++..+.............+..+..||.+.......+..+.++|+||+|+.+++++.+
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g- 204 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYG- 204 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcC-
Confidence 9999999999999999999999987653321110000011122333443321111123457789999999999999983
Q ss_pred ccCCCCcCcHHHHHH
Q 012411 372 LNSSVSELNFKTIVD 386 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~ 386 (464)
..|+...+..+...
T Consensus 205 -~~Pf~~~~~~~~~~ 218 (332)
T cd05623 205 -ETPFYAESLVETYG 218 (332)
T ss_pred -CCCCCCCCHHHHHH
Confidence 45665555444433
No 105
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=3.1e-24 Score=205.97 Aligned_cols=229 Identities=17% Similarity=0.143 Sum_probs=168.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..||.||||.|-.|..+.+.+-+|||+++.++.-+ ..|++.-..-.+.+.. ..+.+-++++..-|...
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvectm~EKrvLAL--~~kppFL~qlHScFQTm--------- 422 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECTMVEKRVLAL--PGKPPFLVQLHSCFQTM--------- 422 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccceehhhhheec--CCCCchHHHHHHHhhhh---------
Confidence 78999999999999999888899999998774322 2233321111111110 11123444444444322
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHH-HHHhcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQV-AIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.+.|+||||+.||+|--.+ .......+.+..+...|..+|-+||+.||+.|
T Consensus 423 ----------------------------DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYR 474 (683)
T KOG0696|consen 423 ----------------------------DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYR 474 (683)
T ss_pred ----------------------------hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeee
Confidence 4567999999999996543 33444456666777778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCc--CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSE--TPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|-.|||++.+|+|||.|||+++. .+.....++||+ |.++++++....-++..+|.|++|..++||+.
T Consensus 475 DLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGT--------PdYiAPEIi~YqPYgksvDWWa~GVLLyEmla- 545 (683)
T KOG0696|consen 475 DLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGT--------PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA- 545 (683)
T ss_pred eccccceEeccCCceEeeecccccccccCCcceeeecCC--------CcccccceEEecccccchhHHHHHHHHHHHHc-
Confidence 9999999999999999999999986 244444556665 66777777655556788999999999999998
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTV 412 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~ 412 (464)
.+.|+++.+..++...|..--..+|-.+..+.+.+.+++++
T Consensus 546 -GQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~lt 586 (683)
T KOG0696|consen 546 -GQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLT 586 (683)
T ss_pred -CCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhh
Confidence 67889888888888777666666777777788888888865
No 106
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.90 E-value=8.9e-24 Score=210.34 Aligned_cols=204 Identities=19% Similarity=0.176 Sum_probs=123.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+|+.||||+++....... .-..++++ +..+..+.|+|++.+.+.+..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~E----~~~l~~l~hpniv~~~~~~~~---------- 70 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVS-DATRILRE----IKLLRLLRHPDIVEIKHIMLP---------- 70 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccch-hHHHHHHH----HHHHHhCCCCCEeeecceEec----------
Confidence 679999999999999988999999998863211100 00011111 111112234444433321100
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.- .......++||||+++ +|.+..... .........+..++..|+.|||+.|++|+
T Consensus 71 ---------------------~~-~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 127 (338)
T cd07859 71 ---------------------PS-RREFKDIYVVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHR 127 (338)
T ss_pred ---------------------cC-CCCCceEEEEEecCCC-CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 00 0001235899999965 666553221 12223344556788889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-H-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-I-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||||+|||++.+|.++|+|||++.......... . ........+..||.+... .+..++++|+||+|+.+++++++
T Consensus 128 dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~~~DvwSlGvvl~el~tg 204 (338)
T cd07859 128 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEVLTG 204 (338)
T ss_pred CCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhcc---ccccCchhHHHHHHHHHHHHHcC
Confidence 999999999999999999999998653221110 0 001111223344433210 13457789999999999999984
Q ss_pred hccCCCCcCc
Q 012411 371 ALNSSVSELN 380 (464)
Q Consensus 371 ~~~~~~~~~~ 380 (464)
..++...+
T Consensus 205 --~~pf~~~~ 212 (338)
T cd07859 205 --KPLFPGKN 212 (338)
T ss_pred --CCCCCCCC
Confidence 34554444
No 107
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.90 E-value=1.7e-23 Score=218.90 Aligned_cols=204 Identities=19% Similarity=0.184 Sum_probs=139.7
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHH---HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE---AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~---~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
++.|++|+||+||.|.+...|.+||+|.+.-.-+. .+..++.+|+.+. .|+||+.+++..... ..
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~---------gh~nIV~yidss~~~--~~- 109 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS---------GHKNIVSYIDSSAIN--RS- 109 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc---------CCCceeeEecccccc--cc-
Confidence 47899999999999999866699999988644211 2223333333322 267777776631100 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCC--HHHHHHHHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLK--VLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~--~~~~~~~~i~~~l~~lh~ 286 (464)
.... .-+..|.||||.|+.|-|+...+ ..++. ....+..+++.|+.+||.
T Consensus 110 -----------------~~~~----------~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 110 -----------------SNNG----------VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred -----------------CCCc----------eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 0000 02346999999999998875432 23344 444456778889999999
Q ss_pred CC--cccCCCCCcceEEccCCcEEEEecCCCCcC--CH---HHHHH---HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 012411 287 YG--YFHADPHPGNLLATPEGKLAFLDFGMMSET--PE---EARFA---IIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (464)
Q Consensus 287 ~g--i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l--~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (464)
.. +||||||-+||||..+|+.||||||.+... .. ..+.. -+..+.+..++.||-+ ++|+---+++++|
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMI--Dlysg~pI~eKsD 240 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMI--DLYSGLPIGEKSD 240 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHH--hhhcCCCCcchhH
Confidence 88 999999999999999999999999998753 22 11111 1223445678888865 5665556799999
Q ss_pred cchHHHHHHHHHHHhccCCCCcC
Q 012411 357 VTPIVPALRNFFDDALNSSVSEL 379 (464)
Q Consensus 357 ~~sl~~~l~~~~~~~~~~~~~~~ 379 (464)
||+|||.+|.++- +..|+++-
T Consensus 241 IWALGclLYkLCy--~t~PFe~s 261 (738)
T KOG1989|consen 241 IWALGCLLYKLCY--FTTPFEES 261 (738)
T ss_pred HHHHHHHHHHHHH--hCCCcCcC
Confidence 9999999999886 67787765
No 108
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.90 E-value=1.6e-23 Score=212.17 Aligned_cols=207 Identities=15% Similarity=0.155 Sum_probs=129.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|+...+|+.||||++....... ......+.+|++.+.
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~------------------------------~~~~~~~~~E~~il~ 56 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM------------------------------RNQAAHVKAERDILA 56 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh------------------------------hhhHHHHHHHHHHHH
Confidence 68999999999999998899999999986321000 000011222222221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
+ + +++++.-........+..++||||++|++|.++..... ........+..++..++.|||+.||+||
T Consensus 57 ~------l-----~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHr 125 (376)
T cd05598 57 E------A-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125 (376)
T ss_pred h------C-----CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 1 1 12222211122223456789999999999988753221 1223334455678889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHH----------------------------------HHHHHHH---HHHHHHh
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE----------------------------------ARFAIIG---HVVHMVN 335 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~----------------------------------~~~~~~~---~~~~~~~ 335 (464)
||||+|||++.+|.++|+|||++..+... .+..... .......
T Consensus 126 Dlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (376)
T cd05598 126 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLV 205 (376)
T ss_pred CCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccC
Confidence 99999999999999999999997533100 0000000 0000112
Q ss_pred cCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHH
Q 012411 336 RDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKT 383 (464)
Q Consensus 336 ~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (464)
+.+.++++++......+.++|+||+|+.+++++++ ..|+...+..+
T Consensus 206 gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G--~~Pf~~~~~~~ 251 (376)
T cd05598 206 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG--QPPFLADTPAE 251 (376)
T ss_pred CCccccCHHHHcCCCCCcceeeeeccceeeehhhC--CCCCCCCCHHH
Confidence 33444555555444557889999999999999984 45555554433
No 109
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.90 E-value=2.6e-23 Score=209.65 Aligned_cols=203 Identities=16% Similarity=0.190 Sum_probs=126.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+++.||||+.......... ....++.+ ..+....|+|+..+++.+..
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~E~----~~l~~l~h~~ii~~~~~~~~---------- 94 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH-AKRAYREL----VLMKCVNHKNIIGLLNVFTP---------- 94 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchh-HHHHHHHH----HHHHhcCCCCccccceeecc----------
Confidence 7899999999999999888999999998643211100 00011111 11112235555544432210
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
.-........++||||+++ ++.+... ..........+..++..++.++|+.|++|||
T Consensus 95 ---------------------~~~~~~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 151 (364)
T cd07875 95 ---------------------QKSLEEFQDVYIVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRD 151 (364)
T ss_pred ---------------------cccccccCeEEEEEeCCCC-CHHHHHH-hcCCHHHHHHHHHHHHHHHHHHhhCCeecCC
Confidence 0000111345899999987 4443322 1122223334567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~ 373 (464)
+||+||+++.++.++|+|||++......... .....+..+..||.+ .....+.++|+||+|+.+++++++ .
T Consensus 152 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~--~~~~~t~~y~aPE~~-----~~~~~~~~~DiwSlG~il~ell~g--~ 222 (364)
T cd07875 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRYYRAPEVI-----LGMGYKENVDIWSVGCIMGEMIKG--G 222 (364)
T ss_pred CCHHHEEECCCCcEEEEeCCCccccCCCCcc--cCCcccCCcCCHHHH-----hCCCCCchhhHHhHHHHHHHHHhC--C
Confidence 9999999999999999999999876432110 001112223344443 334457789999999999999984 4
Q ss_pred CCCCcCcHHH
Q 012411 374 SSVSELNFKT 383 (464)
Q Consensus 374 ~~~~~~~~~~ 383 (464)
.++...+...
T Consensus 223 ~pf~~~~~~~ 232 (364)
T cd07875 223 VLFPGTDHID 232 (364)
T ss_pred CCCCCCCHHH
Confidence 5555554433
No 110
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.90 E-value=1.1e-23 Score=207.45 Aligned_cols=233 Identities=17% Similarity=0.254 Sum_probs=158.1
Q ss_pred CHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCC-----hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHH
Q 012411 123 TLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-----IEEAIGLDFYLIRGVGFLINKYVDIITTDVVAL 197 (464)
Q Consensus 123 ~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-----~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~ 197 (464)
.+..+|.-|.++.+|+|-||.||-|+++.+|+.||||++.+- ..++++.++++|+.
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~------------------- 619 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQN------------------- 619 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHh-------------------
Confidence 477888889899999999999999999999999999998521 12222222222221
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC--CCHHHHHHH
Q 012411 198 IDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNT 275 (464)
Q Consensus 198 ~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~ 275 (464)
+ +++.|..-....+...+.+.|||-+.|.-|.-+...+... ....+.+..
T Consensus 620 -----------------------l-----~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvt 671 (888)
T KOG4236|consen 620 -----------------------L-----HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVT 671 (888)
T ss_pred -----------------------c-----CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHH
Confidence 1 3355554455555566778999999986666554433322 345567778
Q ss_pred HHHHHHHHHHHCCcccCCCCCcceEEccC---CcEEEEecCCCCcCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 276 GIQCSLRQLLEYGYFHADPHPGNLLATPE---GKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 276 ~i~~~l~~lh~~gi~H~Dlkp~Nili~~~---g~i~l~DFGl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
||..+|+|||.+||+|+|+||+|+|+... -++||+|||.++.+.++ .|.+..|+ |.++++++.....+
T Consensus 672 QIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGT--------PAYLaPEVLrnkGy 743 (888)
T KOG4236|consen 672 QILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGT--------PAYLAPEVLRNKGY 743 (888)
T ss_pred HHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCC--------ccccCHHHHhhccc
Confidence 89999999999999999999999999744 47999999999999776 45555554 44444444444344
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCC----CChHHHHHHHHHHHHH
Q 012411 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFN----VPAYYALILRSLTVLE 414 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~p~~~~~l~r~l~~le 414 (464)
....|+||+|.++|--+++- .|+.+. .++-++|....+-||.. +.+....++..++.++
T Consensus 744 NrSLDMWSVGVIiYVsLSGT--FPFNEd--EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVk 806 (888)
T KOG4236|consen 744 NRSLDMWSVGVIIYVSLSGT--FPFNED--EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVK 806 (888)
T ss_pred cccccceeeeEEEEEEeccc--ccCCCc--cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHH
Confidence 88899999999887666633 343322 22344444433333332 5566667777665543
No 111
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.89 E-value=7.2e-23 Score=198.09 Aligned_cols=252 Identities=14% Similarity=0.136 Sum_probs=153.7
Q ss_pred HhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHH
Q 012411 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (464)
Q Consensus 125 ~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (464)
.+.|..+ +.||+|++|.||+|.+..+|+.||+|+.......... ..+...+..+....|++++.+++.+.
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~-- 72 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEI------EDIQQEITVLSQCDSPYITRYYGSYL-- 72 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHH------HHHHHHHHHHHcCCCCccHhhhcccc--
Confidence 4455555 6799999999999999878999999998644322111 11111112222234666666555332
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 012411 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQL 284 (464)
Q Consensus 205 ~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 284 (464)
.....++||||++|++|.+..............+..++..++.++
T Consensus 73 -----------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 117 (277)
T cd06642 73 -----------------------------------KGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYL 117 (277)
T ss_pred -----------------------------------cCCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 124567999999999998764322222223334556777899999
Q ss_pred HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
|+.|++|+|++|+||+++.++.++++|||++..+....... ....+....++++....+..+.+.|+|++|+.+
T Consensus 118 H~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06642 118 HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITA 191 (277)
T ss_pred hcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhh------hcccCcccccCHHHhCcCCCchhhhHHHHHHHH
Confidence 99999999999999999999999999999998765432110 001112223334444444457789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHH
Q 012411 365 RNFFDDALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAK 436 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~ 436 (464)
++++++ ..|+...........+.... ...+...|..+..++..+ ...+|+.|+... .+||+.+
T Consensus 192 ~el~tg--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 192 IELAKG--EPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEAC-------LNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred HHHHhC--CCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHH-------ccCCcccCcCHHHHHHhHHHHH
Confidence 999884 33443332222222111100 011122444454444444 556777765543 5666644
No 112
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.89 E-value=8.7e-24 Score=205.83 Aligned_cols=137 Identities=18% Similarity=0.192 Sum_probs=91.9
Q ss_pred CCceEEEeeecCcccCcHHHHH-hcCCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIE-SQGLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~-~~~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
+..++||||++| +|.+..... ..+.+. ...+..++..++.|+|+.|++|+|+||+|||++.+|.++|+|||++...
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 456899999976 666553321 122333 3345677888999999999999999999999999999999999998765
Q ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 012411 319 PEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (464)
...... .....+..+..||. ...+..+.++|+||+|+.+++++++ ..++...+..+.+..+
T Consensus 161 ~~~~~~--~~~~~~~~y~aPE~-----~~~~~~~~~~DiwslG~il~el~~g--~~~f~~~~~~~~~~~i 221 (290)
T cd07862 161 SFQMAL--TSVVVTLWYRAPEV-----LLQSSYATPVDLWSVGCIFAEMFRR--KPLFRGSSDVDQLGKI 221 (290)
T ss_pred cCCccc--ccccccccccChHH-----HhCCCCCCccchHHHHHHHHHHHcC--CCCcCCCCHHHHHHHH
Confidence 433110 11111222334443 3344557789999999999999973 4455544433333333
No 113
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.89 E-value=5.8e-24 Score=211.43 Aligned_cols=236 Identities=17% Similarity=0.185 Sum_probs=142.2
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||+|+||.||+|++..+|+.||||++...... ......+ ...|.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~---~~~~~~~---------------------------------~~~e~ 44 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV---AKKEVAH---------------------------------TIGER 44 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh---hhhHHHH---------------------------------HHHHH
Confidence 69999999999999888999999998522100 0000000 00011
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccCCC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl 294 (464)
..+.+ ..+.+++.+.--..+....+..++||||++|++|.+..... .........+..++..++.|||+.|++||||
T Consensus 45 ~~l~~--~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDl 122 (330)
T cd05586 45 NILVR--TLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDL 122 (330)
T ss_pred HHHHH--hccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 10000 01112333221112223345679999999999997654321 1222333445677888999999999999999
Q ss_pred CCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHHHh
Q 012411 295 HPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 295 kp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
||+|||++.+|.++|+|||++....... ....++ .+.+++++..... ..+.++|+|++|+.+++++++
T Consensus 123 kp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g--------t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG- 193 (330)
T cd05586 123 KPENILLDATGHIALCDFGLSKANLTDNKTTNTFCG--------TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCG- 193 (330)
T ss_pred CHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccC--------CccccCHHHHcCCCCCCCccceeccccEEEEeccC-
Confidence 9999999999999999999987642221 111222 2233333333221 247789999999999999984
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCC-CCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPF-NVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
..|+...+..++...+.......+. .+++.+..+++.+ ...||+.|+
T Consensus 194 -~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~-------L~~~P~~R~ 241 (330)
T cd05586 194 -WSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGL-------LNRNPQHRL 241 (330)
T ss_pred -CCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHH-------cCCCHHHCC
Confidence 3455555544444333221112221 2456666666666 567787775
No 114
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.89 E-value=1.1e-22 Score=202.92 Aligned_cols=93 Identities=16% Similarity=0.198 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 012411 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (464)
Q Consensus 273 ~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (464)
+..++..|+.|+|+.|++||||||+|||++.++.++|+|||+++.+.........+. ....+.+++++....+..+
T Consensus 179 ~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~ 254 (338)
T cd05102 179 YSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGS----ARLPLKWMAPESIFDKVYT 254 (338)
T ss_pred HHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccC----CCCCccccCcHHhhcCCCC
Confidence 446788899999999999999999999999999999999999987643211111110 0111223344444445568
Q ss_pred CCCCcchHHHHHHHHHH
Q 012411 353 PDVDVTPIVPALRNFFD 369 (464)
Q Consensus 353 ~~~D~~sl~~~l~~~~~ 369 (464)
.++|+||+|+.++++++
T Consensus 255 ~~sDiwslG~il~el~~ 271 (338)
T cd05102 255 TQSDVWSFGVLLWEIFS 271 (338)
T ss_pred cccCHHHHHHHHHHHHh
Confidence 89999999999999986
No 115
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.89 E-value=1.6e-23 Score=218.52 Aligned_cols=240 Identities=15% Similarity=0.147 Sum_probs=152.0
Q ss_pred CcccccceecEEEEEEEccC-CcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 133 PSPIAAASLGQVYKAQLKYS-GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~-g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
.+.||.|++|.||+|....+ ++.||+|.......... . . +
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~----~-----------------------------~------~ 112 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQA----A-----------------------------Y------A 112 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHH----H-----------------------------H------H
Confidence 37799999999999998766 78899997643321110 0 0 1
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH---hcCCCH--HHHHHHHHHHHHHHHHH
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKV--LDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~--~~~~~~~i~~~l~~lh~ 286 (464)
..|+..+..+ +++++.-..-+.......+|||||++|++|.+..... ...++. ...+..++..+|.|+|+
T Consensus 113 ~~E~~~l~~l-----~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~ 187 (478)
T PTZ00267 113 RSELHCLAAC-----DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS 187 (478)
T ss_pred HHHHHHHHhC-----CCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1122111111 1222221111222345679999999999998764321 122333 33455678889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
.|++||||||+|||++.+|.++|+|||++..+......... ....+.+.+++++.+..+..+.++|+|++|+.+++
T Consensus 188 ~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 263 (478)
T PTZ00267 188 RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVA----SSFCGTPYYLAPELWERKRYSKKADMWSLGVILYE 263 (478)
T ss_pred CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccc----cccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHH
Confidence 99999999999999999999999999999876543211110 11123344455555555556888999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh
Q 012411 367 FFDDALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA 429 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~ 429 (464)
++++ ..|+...+..++...+..... ..+..+++.+..++..+ ...||+-|+...
T Consensus 264 l~tg--~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~-------L~~dP~~Rps~~ 318 (478)
T PTZ00267 264 LLTL--HRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPL-------LSKNPALRPTTQ 318 (478)
T ss_pred HHhC--CCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHH-------hccChhhCcCHH
Confidence 9984 456665555555544432211 12344666666666665 567887776643
No 116
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.89 E-value=7.8e-24 Score=210.71 Aligned_cols=204 Identities=13% Similarity=0.140 Sum_probs=131.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|++..+++.||||++....... ..+. ..+.+|
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~-----------------------------~~~~~e----- 51 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK-RAET-----------------------------ACFREE----- 51 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh-hHHH-----------------------------HHHHHH-----
Confidence 67999999999999998889999999985321000 0000 001111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
...+ .. .+++.+....-+....+..++||||++|++|.++.......+. ....+..++..+++|+|+.|++|
T Consensus 52 -~~~l----~~-~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiH 125 (331)
T cd05624 52 -RNVL----VN-GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVH 125 (331)
T ss_pred -HHHH----Hh-CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 1111 11 1233333222233344567899999999999987543222333 34455677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-----CCCCCCCCcchHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-----DFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~D~~sl~~~l~~ 366 (464)
||+||+|||++.+|.++|+|||++..+........ ....+.+..++++.+.. +..+.++|+||+|+.+++
T Consensus 126 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~e 200 (331)
T cd05624 126 RDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS-----SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 200 (331)
T ss_pred ccCchHHEEEcCCCCEEEEeccceeeccCCCceee-----ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhh
Confidence 99999999999999999999999877643321100 01112333344444332 445778999999999999
Q ss_pred HHHHhccCCCCcCcHHHHH
Q 012411 367 FFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~ 385 (464)
++++ ..|+...+..+..
T Consensus 201 ll~g--~~Pf~~~~~~~~~ 217 (331)
T cd05624 201 MLYG--ETPFYAESLVETY 217 (331)
T ss_pred hhhC--CCCccCCCHHHHH
Confidence 9984 4555555544433
No 117
>PTZ00284 protein kinase; Provisional
Probab=99.89 E-value=1e-22 Score=212.20 Aligned_cols=205 Identities=13% Similarity=0.091 Sum_probs=124.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|+||.||+|++..+++.||||+++..... ......|+.++.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~----------------------------------~~~~~~e~~~l~ 180 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKY----------------------------------TRDAKIEIQFME 180 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchhh----------------------------------HHHHHHHHHHHH
Confidence 6799999999999999888999999998632100 011112222222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHH-CCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLE-YGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~-~gi~H 291 (464)
+.+.... .....-+.+...+.......++|||++ |++|.+..... .........+..++..+|.|||. .||+|
T Consensus 181 ~l~~~~~----~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiH 255 (467)
T PTZ00284 181 KVRQADP----ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMH 255 (467)
T ss_pred HHhhcCc----ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 2211100 000111222233333334578999998 55666553221 12223344556788889999998 59999
Q ss_pred CCCCCcceEEccCC----------------cEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCC
Q 012411 292 ADPHPGNLLATPEG----------------KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDV 355 (464)
Q Consensus 292 ~Dlkp~Nili~~~g----------------~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 355 (464)
|||||+|||++.++ .+||+|||.+....... ...++ .+.+++++++..+..+.++
T Consensus 256 rDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~-~~~~g--------t~~Y~APE~~~~~~~~~~~ 326 (467)
T PTZ00284 256 TDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR-TAIVS--------TRHYRSPEVVLGLGWMYST 326 (467)
T ss_pred CCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc-ccccC--------CccccCcHHhhcCCCCcHH
Confidence 99999999998765 49999999876432221 11222 2333344444334457789
Q ss_pred CcchHHHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 012411 356 DVTPIVPALRNFFDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 356 D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (464)
|+|++||.+++++++ ..++...+..+.+..+
T Consensus 327 DiwSlGvil~elltG--~~pf~~~~~~~~~~~i 357 (467)
T PTZ00284 327 DMWSMGCIIYELYTG--KLLYDTHDNLEHLHLM 357 (467)
T ss_pred HHHHHHHHHHHHHhC--CCCCCCCChHHHHHHH
Confidence 999999999999984 4566554433333333
No 118
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.89 E-value=7.9e-23 Score=211.12 Aligned_cols=194 Identities=17% Similarity=0.190 Sum_probs=122.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||||+....... ...++.+++ ...|+|++.+.+.+..
T Consensus 72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~-~~~Ei~il~----------~l~h~niv~l~~~~~~---------- 130 (440)
T PTZ00036 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQY-KNRELLIMK----------NLNHINIIFLKDYYYT---------- 130 (440)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEecCcch-HHHHHHHHH----------hcCCCCCcceeeeEee----------
Confidence 7899999999999999888999999987543211 112222222 2236665554332110
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCC--CCceEEEeeecCcccCcHHHH---HhcCCC--HHHHHHHHHHHHHHHHHH
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVAI---ESQGLK--VLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~~---~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (464)
..+.... ...++||||++| ++.+.... .....+ ....+..++..||.|||+
T Consensus 131 ---------------------~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~ 188 (440)
T PTZ00036 131 ---------------------ECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS 188 (440)
T ss_pred ---------------------cccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000001 124589999987 44443221 112222 334456788889999999
Q ss_pred CCcccCCCCCcceEEccCC-cEEEEecCCCCcCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcchHHHH
Q 012411 287 YGYFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDVTPIVPA 363 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g-~i~l~DFGl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~D~~sl~~~ 363 (464)
.||+||||||+|||++.++ .++|+|||+++.+...... ...+ .+.++++++.. ....+.++|+||+|+.
T Consensus 189 ~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~--------t~~y~aPE~~~~~~~~~~~~DiwSlGvi 260 (440)
T PTZ00036 189 KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYIC--------SRFYRAPELMLGATNYTTHIDLWSLGCI 260 (440)
T ss_pred CCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCC--------CcCccCHHHhcCCCCCCcHHHHHHHHHH
Confidence 9999999999999998665 6999999999876432211 1111 22233333332 1235778999999999
Q ss_pred HHHHHHHhccCCCCcCc
Q 012411 364 LRNFFDDALNSSVSELN 380 (464)
Q Consensus 364 l~~~~~~~~~~~~~~~~ 380 (464)
+++++++. .++.+.+
T Consensus 261 l~elltG~--~pf~~~~ 275 (440)
T PTZ00036 261 IAEMILGY--PIFSGQS 275 (440)
T ss_pred HHHHHhCC--CCCCCCC
Confidence 99999853 4555443
No 119
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.89 E-value=3e-23 Score=201.13 Aligned_cols=188 Identities=16% Similarity=0.183 Sum_probs=122.1
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||+|+||+||+++.+.+|+.||+|+............ ..... |.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~------------------------------~~~~~------E~ 44 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGE------------------------------KMALL------EK 44 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhh------------------------------HHHHH------HH
Confidence 6999999999999988999999999853211100000 00111 11
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHH--HHHHHHHHHHHHHHHCCcccC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLD--LVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~--~~~~~i~~~l~~lh~~gi~H~ 292 (464)
..+.+ + +++++.-..-+.+.....+++|||++|++|.+..... ..+.+... .+..++..++.++|+.|++|+
T Consensus 45 ~il~~----l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~ 119 (277)
T cd05607 45 EILEK----V-NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYR 119 (277)
T ss_pred HHHHh----c-CCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEc
Confidence 11111 1 2233322211223345678999999999997664322 22344443 345678889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|+||+||+++.++.++|+|||++..+....... ...+.+..++++....+..+.++|+||+|+.+++++++.
T Consensus 120 dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~ 191 (277)
T cd05607 120 DMKPENVLLDDQGNCRLSDLGLAVELKDGKTIT-------QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191 (277)
T ss_pred cCChHhEEEcCCCCEEEeeceeeeecCCCceee-------ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCC
Confidence 999999999999999999999987664321100 011223334444444455678899999999999999843
No 120
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.89 E-value=6e-23 Score=199.59 Aligned_cols=190 Identities=23% Similarity=0.270 Sum_probs=121.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|+||+|+++.+|+.||+|+.+..... ....++.+++.+ ....|+|++.+++.+...
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~h~ni~~~~~~~~~~---- 74 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRL-------EAFDHPNIVRLMDVCATS---- 74 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHh-------hhcCCCCeeeeeeeeccc----
Confidence 6799999999999999989999999988643211 111222222211 112244444333321100
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCC--HHHHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLK--VLDLVNTGIQCSLRQLL 285 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~--~~~~~~~~i~~~l~~lh 285 (464)
..+.....+++|||+++ +|.+..... ..+.+ ....+..++..++.|+|
T Consensus 75 ----------------------------~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 125 (288)
T cd07863 75 ----------------------------RTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125 (288)
T ss_pred ----------------------------cCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00012345899999986 565543221 12233 33445677888999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
+.|++|+|+||+||+++.+|.++|+|||++..+...... ........+..||. ...+..+.++|+||+|+.++
T Consensus 126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~-----~~~~~~~~~~DiwslG~~l~ 198 (288)
T cd07863 126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMAL--TPVVVTLWYRAPEV-----LLQSTYATPVDMWSVGCIFA 198 (288)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccCccccccCcccC--CCccccccccCchH-----hhCCCCCCcchhhhHHHHHH
Confidence 999999999999999999999999999998866432110 00111222334443 33445678899999999999
Q ss_pred HHHHH
Q 012411 366 NFFDD 370 (464)
Q Consensus 366 ~~~~~ 370 (464)
+++.+
T Consensus 199 ~l~~g 203 (288)
T cd07863 199 EMFRR 203 (288)
T ss_pred HHHhC
Confidence 99863
No 121
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.2e-23 Score=192.53 Aligned_cols=268 Identities=15% Similarity=0.175 Sum_probs=176.0
Q ss_pred hhcccC-CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHH
Q 012411 127 IFSSIS-PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (464)
Q Consensus 127 ~f~~~~-~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (464)
.|...+ .+.+|.|..+.|.++.++.+|.+.|+|++.-..... ...+ ..++.+..
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~---------------------~~e~----~~~~~EaT 69 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTE---------------------SGET----PYEMREAT 69 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEeccccc---------------------CCcc----HHHHHHHH
Confidence 344444 467999999999999999999999999985332111 1222 23334445
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHH
Q 012411 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQL 284 (464)
Q Consensus 206 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~l 284 (464)
.+|++.++. ..++|++.--+-+.+.++-.++|.|.++.|.|.|+.... .......+.+++++..++.|+
T Consensus 70 ~~Ev~ILRq----------v~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeyl 139 (411)
T KOG0599|consen 70 RQEISILRQ----------VMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYL 139 (411)
T ss_pred HHHHHHHHH----------hcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHH
Confidence 555554432 334555443333334455668999999999999985432 233455667888899999999
Q ss_pred HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcchHH
Q 012411 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPIV 361 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~D~~sl~ 361 (464)
|..+|+|||+||+|||++++.+++|.|||.+.++.+..+ ..+||+..+++ ||.+.-..++ .| ++.++|+|++|
T Consensus 140 Ha~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLA---PEtikC~m~e~~pG-Ys~EVD~Wa~G 215 (411)
T KOG0599|consen 140 HARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLA---PETIKCSMYENHPG-YSKEVDEWACG 215 (411)
T ss_pred HHhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccC---hhheeeecccCCCC-ccchhhHHHHH
Confidence 999999999999999999999999999999999977644 34777755554 3322222221 23 37789999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHh--hCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHH
Q 012411 362 PALRNFFDDALNSSVSELNFKTIVDGLGAVLY--QYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAK 436 (464)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~ 436 (464)
..|+.++.+ ..|+-.. ++++ +...+. ++.+.-|. +....-..-.+-.-+++.||.-++++. +|||+.+
T Consensus 216 VImyTLLaG--cpPFwHR--kQml--MLR~ImeGkyqF~spe-Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 216 VIMYTLLAG--CPPFWHR--KQML--MLRMIMEGKYQFRSPE-WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred HHHHHHHcC--CCchhHH--HHHH--HHHHHHhcccccCCcc-hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 999999874 3444322 2222 122222 34444443 222222222223345789999999876 8999976
Q ss_pred HhcC
Q 012411 437 RLLT 440 (464)
Q Consensus 437 ~l~~ 440 (464)
.+..
T Consensus 289 ~~~~ 292 (411)
T KOG0599|consen 289 IAQQ 292 (411)
T ss_pred HHHh
Confidence 6653
No 122
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=9.7e-24 Score=210.82 Aligned_cols=183 Identities=20% Similarity=0.255 Sum_probs=132.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH---HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE---AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~---~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
..||.|+||.||+|.+. +|+.||||.......+ .+..++.+ +....|+|++.++..+.
T Consensus 81 ~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~----------ls~l~H~Nlv~LlGyC~-------- 141 (361)
T KOG1187|consen 81 NLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEI----------LSRLRHPNLVKLLGYCL-------- 141 (361)
T ss_pred cceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHH----------HhcCCCcCcccEEEEEe--------
Confidence 68999999999999998 7899999988765432 22222222 22334666666655322
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCC-CceEEEeeecCcccCcHHHHHhc-CCCHHH--HHHHHHHHHHHHHHH
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTS-GKVLTMEWVEGVKLNEQVAIESQ-GLKVLD--LVNTGIQCSLRQLLE 286 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-~~~LvmE~~~G~~L~~~~~~~~~-~~~~~~--~~~~~i~~~l~~lh~ 286 (464)
..+ .++||.||+++|+|.+....... .+++.. .+...++.||.|||.
T Consensus 142 -----------------------------e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~ 192 (361)
T KOG1187|consen 142 -----------------------------EGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHE 192 (361)
T ss_pred -----------------------------cCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHcc
Confidence 224 48999999999999987554433 444433 455667779999998
Q ss_pred CC---cccCCCCCcceEEccCCcEEEEecCCCCcCCH-HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 012411 287 YG---YFHADPHPGNLLATPEGKLAFLDFGMMSETPE-EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (464)
Q Consensus 287 ~g---i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~ 362 (464)
.. |+|||+||+|||+|++.+.||+|||+++..+. ....... . .++..+++++++..|.++.++|++|||.
T Consensus 193 ~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~-----~-~gt~gY~~PEy~~~g~lt~KsDVySFGV 266 (361)
T KOG1187|consen 193 GCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTT-----V-MGTFGYLAPEYASTGKLTEKSDVYSFGV 266 (361)
T ss_pred CCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeee-----c-CCCCccCChhhhccCCcCcccccccchH
Confidence 55 99999999999999999999999999977664 3211110 0 2334455566667788999999999999
Q ss_pred HHHHHHHH
Q 012411 363 ALRNFFDD 370 (464)
Q Consensus 363 ~l~~~~~~ 370 (464)
.+.|++++
T Consensus 267 vllElitg 274 (361)
T KOG1187|consen 267 VLLELITG 274 (361)
T ss_pred HHHHHHhC
Confidence 99999884
No 123
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.89 E-value=2.4e-23 Score=198.36 Aligned_cols=189 Identities=20% Similarity=0.200 Sum_probs=122.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|+++.+|+.||+|..+........ ..+ ..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~--------------------------------~~~------~~ 42 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK--------------------------------AKF------LQ 42 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHH--------------------------------HHH------HH
Confidence 4699999999999999889999999987644221110 111 11
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ +++++.-..-+.......++||||++|++|.+.........+.. ..+..++..++.|+|+.|++|
T Consensus 43 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 117 (252)
T cd05084 43 EARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIH 117 (252)
T ss_pred HHHHHHhC-----CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 11111111 12222211112223456789999999999988754332233433 334567778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+||+||+++.++.++|+|||++............ .........++++....+..+.+.|+|++|+.++++++
T Consensus 118 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~ 191 (252)
T cd05084 118 RDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG----GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFS 191 (252)
T ss_pred cccchheEEEcCCCcEEECccccCcccccccccccC----CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998865432111000 00011122344444455556778999999999999986
No 124
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.89 E-value=3.4e-23 Score=206.32 Aligned_cols=187 Identities=21% Similarity=0.256 Sum_probs=122.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|..||+|+...........+ +.+ .++.+....|+|++.+++
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~--~~~----E~~~l~~l~h~~iv~~~~-------------- 70 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQ--IIR----ELQVLHECNSPYIVGFYG-------------- 70 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHH--HHH----HHHHHHHCCCCcccceeE--------------
Confidence 679999999999999998899999999875432211000 000 000011112222222221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH-CCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE-YGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~gi~H 291 (464)
++ ......++||||++|++|.++..... ........+..++..++.|+|+ .|++|
T Consensus 71 ----------------------~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH 127 (333)
T cd06650 71 ----------------------AF-YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 127 (333)
T ss_pred ----------------------EE-EECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEe
Confidence 11 22356789999999999988754321 1222333455677789999997 47999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.+|.++|+|||++..+......... +.+..++++.......+.++|+|++|+.+++++.+.
T Consensus 128 ~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~--------~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~ 199 (333)
T cd06650 128 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199 (333)
T ss_pred cCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC--------CCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999998765433221111 222333444444444577899999999999999854
No 125
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.88 E-value=9.7e-23 Score=198.42 Aligned_cols=237 Identities=17% Similarity=0.183 Sum_probs=145.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|....+|+.||||...+....... .... +..
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~------------------------------~~~~------~~~ 49 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK------------------------------GESM------ALN 49 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH------------------------------HHHH------HHH
Confidence 6799999999999999989999999988643211100 0001 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++ . ++.+.............++||||++|++|.+..... ..+.+. ...+..++..++.|+|+.|++
T Consensus 50 E~~il~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05630 50 EKQILEKV----N-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124 (285)
T ss_pred HHHHHHhC----C-CCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 22222211 1 122221111122235678999999999998765322 223333 334456788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||+++.++.++|+|||++......... ... .+.+..++++....+..+.++|+|++|+.+++++++
T Consensus 125 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~--~~~-----~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g 197 (285)
T cd05630 125 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI--KGR-----VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 197 (285)
T ss_pred eCCCCHHHEEECCCCCEEEeeccceeecCCCccc--cCC-----CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhC
Confidence 9999999999999999999999998765432210 000 122333444444445567889999999999999984
Q ss_pred hccCCCCcCcH---HHHHHHH-HHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 371 ALNSSVSELNF---KTIVDGL-GAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 371 ~~~~~~~~~~~---~~~~~~l-~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
..|+..... ......+ .......+..+++.+..+++.+ ...||.-|+.
T Consensus 198 --~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~~p~~R~s 249 (285)
T cd05630 198 --QSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKML-------LCKDPKERLG 249 (285)
T ss_pred --CCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHH-------hhcCHHHccC
Confidence 345443211 1111111 1112233445666666666665 5567766654
No 126
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.88 E-value=6.7e-23 Score=197.57 Aligned_cols=242 Identities=17% Similarity=0.195 Sum_probs=156.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|.+|.||.|.++.++..+|+||+....... -+.++++....+.+..
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~----rkKl~Ra~tE~eIL~~------------------------- 133 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS----RKKLKRAQTEREILSL------------------------- 133 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh----hhHHHHHHHHHHHHHh-------------------------
Confidence 67999999999999999888999999986431111 1111111111111111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCc--eEEEeeecCcccCcHHHHHh---cCCCHHHHHHHHHHHHHHHHHHCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGK--VLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~--~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~g 288 (464)
..+-.+|..|..+.+.. +||||||+||+|..+.+... ......+.+...+..||+|||-.|
T Consensus 134 --------------lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG 199 (459)
T KOG0610|consen 134 --------------LDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG 199 (459)
T ss_pred --------------cCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc
Confidence 12233566666655544 79999999999987644322 224567788888889999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHH--H---------------HH---------HHHH-H------------
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEE--A---------------RF---------AIIG-H------------ 329 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~---------------~~---------~~~~-~------------ 329 (464)
||.|||||+||||.++|+|-|.||-++.+.+-. . +. .... .
T Consensus 200 ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~ 279 (459)
T KOG0610|consen 200 IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRS 279 (459)
T ss_pred eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccccccccccccc
Confidence 999999999999999999999999987643210 0 00 0000 0
Q ss_pred ---HHH--------HHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCC-
Q 012411 330 ---VVH--------MVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPF- 397 (464)
Q Consensus 330 ---~~~--------~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~- 397 (464)
+.+ .+-+.-|++++++++-..-+..+|+|.||..+|||+- ...|+.+.+-.+.+..+..---+++-
T Consensus 280 ~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLy--G~TPFKG~~~~~Tl~NIv~~~l~Fp~~ 357 (459)
T KOG0610|consen 280 LPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLY--GTTPFKGSNNKETLRNIVGQPLKFPEE 357 (459)
T ss_pred chhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHh--CCCCcCCCCchhhHHHHhcCCCcCCCC
Confidence 000 0124556677777665555778999999999999997 55788777765555444321111111
Q ss_pred -CCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 398 -NVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 398 -~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
.++.....|+|.+ +.-||.-++-
T Consensus 358 ~~vs~~akDLIr~L-------LvKdP~kRlg 381 (459)
T KOG0610|consen 358 PEVSSAAKDLIRKL-------LVKDPSKRLG 381 (459)
T ss_pred CcchhHHHHHHHHH-------hccChhhhhc
Confidence 2334556666666 4457766654
No 127
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.88 E-value=1.4e-22 Score=196.89 Aligned_cols=248 Identities=19% Similarity=0.222 Sum_probs=148.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||+|.++....... . ..+...+..+....|++++.+++.+..
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~---~---~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESK---F---NQIIMELDILHKAVSPYIVDFYGAFFI---------- 70 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHH---H---HHHHHHHHHHHhcCCCcHHhhhhheec----------
Confidence 679999999999999988999999998864322110 0 011111111122346666665553221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh--cCCCH--HHHHHHHHHHHHHHHHH-CC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKV--LDLVNTGIQCSLRQLLE-YG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~--~~~~~~~i~~~l~~lh~-~g 288 (464)
.+..++||||++|++|..+..... ...+. ...+..++..++.|+|+ .|
T Consensus 71 ---------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~ 123 (286)
T cd06622 71 ---------------------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN 123 (286)
T ss_pred ---------------------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 145679999999999977644321 12333 34455677789999997 69
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcchHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-ALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~D~~sl~~~l~~~ 367 (464)
++|+||||+||+++.++.++|+|||++..+.........++ ..+..||.+..... .-...+.++|+|++|+.++++
T Consensus 124 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~---~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l 200 (286)
T cd06622 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGC---QSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEM 200 (286)
T ss_pred EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCc---cCccCcchhcCCCCCccCCCCcccchHhHHHHHHHH
Confidence 99999999999999999999999999876643221111111 11223332211000 001125678999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCC----hHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHH
Q 012411 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVP----AYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAK 436 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p----~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~ 436 (464)
+++. .|+...+.......+.......+..+| +.+..+++.+ ...+|+-++... .+||+..
T Consensus 201 ~~g~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 201 ALGR--YPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKC-------LNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred HhCC--CCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHH-------cccCcccCCCHHHHhcChhhhh
Confidence 9843 455444444444444444333333444 4444444443 456776665443 4555543
No 128
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.88 E-value=4.5e-23 Score=199.96 Aligned_cols=195 Identities=14% Similarity=0.149 Sum_probs=122.0
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|++|.||+|....+|+.||+|+..+........+. .+..|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~------------------------------------~~~~~ 44 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET------------------------------------LALNE 44 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHH------------------------------------HHHHH
Confidence 389999999999999878999999998653211000000 00111
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcccC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
......+.. .+++.+..-.-+.......++||||++|++|.+..... ..+. ....+..++..++.|+|+.|++|+
T Consensus 45 ~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 121 (278)
T cd05606 45 RIMLSLVST--GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRFVVYR 121 (278)
T ss_pred HHHHHHHHh--CCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcC
Confidence 111111111 12233221111112234568999999999998764322 2233 333455677789999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHHHh
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|++|+||+++.++.++|+|||++..+.........+ ....++++.+..+ ..+.++|+|++|+.+++++++
T Consensus 122 di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~--------~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g- 192 (278)
T cd05606 122 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG--------THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG- 192 (278)
T ss_pred CCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC--------CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhC-
Confidence 999999999999999999999987664332211122 2222333333323 347789999999999999984
Q ss_pred ccCCCCc
Q 012411 372 LNSSVSE 378 (464)
Q Consensus 372 ~~~~~~~ 378 (464)
..|+..
T Consensus 193 -~~p~~~ 198 (278)
T cd05606 193 -HSPFRQ 198 (278)
T ss_pred -CCCCCC
Confidence 345443
No 129
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.88 E-value=4e-22 Score=190.61 Aligned_cols=195 Identities=16% Similarity=0.131 Sum_probs=133.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||.|++|.||+|.+..+|+.||+|+....... +....+.+...++.+....|+|+..+.+.+..
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 71 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCV----EKGSVRNVLNERRILQELNHPFLVNLWYSFQD---------- 71 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhc----chhHHHHHHHHHHHHHhCCCCChHHHHHhhcC----------
Confidence 6899999999999999888999999998643211 11112222222223334457777776654321
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
....+++|||++|++|.+..... ...+. ...+..++..++.++|..|++|
T Consensus 72 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h 123 (258)
T cd05578 72 ---------------------------EENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIH 123 (258)
T ss_pred ---------------------------CCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 24567999999999998775433 23333 3344567788999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|++|.||+++.++.++|+|||.+......... ....+....++++.......+.+.|+|++|+.+++++++
T Consensus 124 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g- 195 (258)
T cd05578 124 RDIKPDNILLDEQGHVHITDFNIATKVTPDTLT-------TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRG- 195 (258)
T ss_pred cCCCHHHeEEcCCCCEEEeecccccccCCCccc-------cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhC-
Confidence 999999999999999999999998876443210 011122333344444334457889999999999999984
Q ss_pred ccCCCCcC
Q 012411 372 LNSSVSEL 379 (464)
Q Consensus 372 ~~~~~~~~ 379 (464)
..|+...
T Consensus 196 -~~p~~~~ 202 (258)
T cd05578 196 -KRPYRGH 202 (258)
T ss_pred -CCCCCCC
Confidence 3444433
No 130
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.88 E-value=3.8e-22 Score=194.96 Aligned_cols=194 Identities=21% Similarity=0.221 Sum_probs=128.6
Q ss_pred hhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHH
Q 012411 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (464)
Q Consensus 126 ~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (464)
+.+..+ ..||+|++|.||+|.+..+|..||||.......... ....+.+ ..+....|+|++.+.+.+..
T Consensus 22 ~~~~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~---~~~~~e~----~~l~~l~h~~ii~~~~~~~~-- 90 (292)
T cd06658 22 EYLDSF--IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEV----VIMRDYHHENVVDMYNSYLV-- 90 (292)
T ss_pred HHHhhh--hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHH---HHHHHHH----HHHHhCCCCcHHHHHHheec--
Confidence 344444 569999999999999987899999998754322111 0111111 12223346666666553221
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 012411 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL 285 (464)
Q Consensus 206 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh 285 (464)
....++||||++|++|.++........+....+..++..++.++|
T Consensus 91 -----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH 135 (292)
T cd06658 91 -----------------------------------GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLH 135 (292)
T ss_pred -----------------------------------CCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 245579999999999987643322233344455677888999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
+.|++|+|+||+||++++++.++|+|||++..+....... .. ..+....++++.......+.+.|+|++|+.++
T Consensus 136 ~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~-~~-----~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~ 209 (292)
T cd06658 136 NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR-KS-----LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 209 (292)
T ss_pred HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC-ce-----eecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999999987653322110 00 01122233334433344577899999999999
Q ss_pred HHHHHh
Q 012411 366 NFFDDA 371 (464)
Q Consensus 366 ~~~~~~ 371 (464)
+++.+.
T Consensus 210 el~~g~ 215 (292)
T cd06658 210 EMIDGE 215 (292)
T ss_pred HHHhCC
Confidence 999843
No 131
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1.3e-22 Score=203.64 Aligned_cols=200 Identities=18% Similarity=0.291 Sum_probs=138.7
Q ss_pred hhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHH
Q 012411 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (464)
Q Consensus 126 ~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (464)
..|..| ++||-|+||.|.+++-..|...+|.|.+++. |+-.- .-...+
T Consensus 629 SmFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKa-------DVl~r-----------------------nQvaHV 676 (1034)
T KOG0608|consen 629 SMFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLRKA-------DVLMR-----------------------NQVAHV 676 (1034)
T ss_pred cceEEE--eeecccccceeEEEeecchhhHHHHhhhHHH-------HHHhh-----------------------hhhhhh
Confidence 356666 8999999999999998766777899987632 22111 111235
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccC--CCCceEEEeeecCcccCcHH-HHHhcCCCHHHHHHHHHHHHHH
Q 012411 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQV-AIESQGLKVLDLVNTGIQCSLR 282 (464)
Q Consensus 206 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~-~~~~~~~~~~~~~~~~i~~~l~ 282 (464)
..|-|.+.||.| ++|. +.|..+ ....|+||||++||++-.+. ...-..++.++++...+.++++
T Consensus 677 KAERDILAEADn-----------~WVV--rLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAie 743 (1034)
T KOG0608|consen 677 KAERDILAEADN-----------EWVV--RLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIE 743 (1034)
T ss_pred hhhhhhHhhcCC-----------cceE--EEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 566777777654 4543 445444 35679999999999987653 2233334566777777889999
Q ss_pred HHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCC----------------------HH-----------HH---HHH
Q 012411 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP----------------------EE-----------AR---FAI 326 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~----------------------~~-----------~~---~~~ 326 (464)
++|..|||||||||.|||||.||+|||.|||++.-+. ++ .+ ..-
T Consensus 744 sVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h 823 (1034)
T KOG0608|consen 744 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQH 823 (1034)
T ss_pred HHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhh
Confidence 9999999999999999999999999999999986220 00 00 111
Q ss_pred HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 327 IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
...+...+.+.+.+++++++.-...+..+|.|+.|.++++|+-+
T Consensus 824 ~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 824 QRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred hhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 11223344566666776665444447788999999999999973
No 132
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.88 E-value=1.5e-22 Score=195.45 Aligned_cols=234 Identities=15% Similarity=0.099 Sum_probs=143.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcc-cCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDII-TTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
++||+|++|+||+|....+|+.||+|+..+......... +.+......+.... |+++..+.+.+..
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~--------- 73 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKV----KYVKIEKEVLTRLNGHPGIIKLYYTFQD--------- 73 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHH----HHHHHHHHHHHhcccCCCchhHHHHhcC---------
Confidence 679999999999999988999999999865311100000 11111111111222 5666555543221
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.+..+++|||++|++|.+..... .........+..++..++.+||+.|++|
T Consensus 74 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H 125 (280)
T cd05581 74 ----------------------------EENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIH 125 (280)
T ss_pred ----------------------------CceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 24567999999999998764432 1223334455677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHH--------------HHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII--------------GHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~ 357 (464)
+|++|+||+++.+|.++++|||++............ ........+....++++....+..+.+.|+
T Consensus 126 ~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di 205 (280)
T cd05581 126 RDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDL 205 (280)
T ss_pred cCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhH
Confidence 999999999999999999999998876543211000 000000111222333444444456778999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 358 TPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
|++|+.++++++ ...|+...+.......+.......+..+|+.+..+++.+
T Consensus 206 ~slG~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 256 (280)
T cd05581 206 WALGCIIYQMLT--GKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKL 256 (280)
T ss_pred HHHHHHHHHHHh--CCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHH
Confidence 999999999998 344555444333333333333334444555555555544
No 133
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.88 E-value=1.8e-23 Score=210.59 Aligned_cols=229 Identities=17% Similarity=0.193 Sum_probs=170.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|.||.|..|++..+|.+||||++.... .+...++.+.+.++.+..+.|||+++++.++..
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~-----ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t---------- 126 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ-----LNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET---------- 126 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhcc-----cChHHHHHHHHHHHHHHhcCCcceeeeeeeeee----------
Confidence 67999999999999999999999999987552 222333334444444445568888777765432
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
....|+||||+.|+.+.++.... .......+....++..+++|||.++|+||
T Consensus 127 ---------------------------~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHr 179 (596)
T KOG0586|consen 127 ---------------------------EATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHR 179 (596)
T ss_pred ---------------------------cceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceecc
Confidence 25668999999999999875432 12234455667888899999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHH-HcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY-ALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|||++|||++.+-+++|+|||++..++... +.....+.++.++++++ ...+..+++|+|++|..++.++.+
T Consensus 180 dLk~eNilL~~~mnikIaDfgfS~~~~~~~-------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~G- 251 (596)
T KOG0586|consen 180 DLKAENILLDENMNIKIADFGFSTFFDYGL-------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEG- 251 (596)
T ss_pred ccchhhcccccccceeeeccccceeecccc-------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeec-
Confidence 999999999999999999999999886542 12233445666666654 345789999999999999998884
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHH
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVL 413 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~l 413 (464)
..|+++-+.+++-.......+..++.+..++..++|-++.+
T Consensus 252 -sLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl 292 (596)
T KOG0586|consen 252 -SLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVL 292 (596)
T ss_pred -ccccCCcccccccchheeeeecccceeechhHHHHHHhhcc
Confidence 46777666666666555555566777778888888888543
No 134
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=7.3e-22 Score=180.39 Aligned_cols=163 Identities=20% Similarity=0.245 Sum_probs=106.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchh-cccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVD-IITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
..||+|++|+||+|.+. +|+.||||+++++.......| ..+....+ +.. ....+..++...+. .
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~---------~ 67 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRD-RYVSGEFR----FRHGYCKSNPRKMVRTWA---------E 67 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHH-HhhcCCch----hhccccCCCHHHHHHHHH---------H
Confidence 57999999999999997 999999999998743221111 11000000 000 01123333333222 3
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHH--HHHHHHHHHHHH-HHCCc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDL--VNTGIQCSLRQL-LEYGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~--~~~~i~~~l~~l-h~~gi 289 (464)
.|++++.++.+ +.+..|.++. ....+|||||++|+++.... ....+.+.... +..++..++.++ |+.|+
T Consensus 68 ~E~~~l~~l~~-----~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~gi 139 (190)
T cd05147 68 KEMRNLKRLVT-----AGIPCPEPIL--LKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCRL 139 (190)
T ss_pred HHHHHHHHHHH-----CCCCCCcEEE--ecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57788888865 2344555543 34559999999997665432 22334444433 345677899999 69999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~ 320 (464)
+||||||+|||++ +++++|+|||++.....
T Consensus 140 iHrDlkP~NIli~-~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 140 VHADLSEYNLLYH-DGKLYIIDVSQSVEHDH 169 (190)
T ss_pred ccCCCCHHHEEEE-CCcEEEEEccccccCCC
Confidence 9999999999998 58899999999986543
No 135
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=7.8e-22 Score=180.51 Aligned_cols=180 Identities=20% Similarity=0.239 Sum_probs=117.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
.+||+|++|+||+|++. +|+.||||+.+++.... ..+...+......... ....+...+..++ +..
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------~~~ 68 (190)
T cd05145 3 GCISTGKEANVYHARTG-DGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR---YSKSNPRKLVFAW---------AEK 68 (190)
T ss_pred ceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc---cccCCHHHHHHHH---------HHH
Confidence 68999999999999988 99999999999874321 1111111100000000 0012233332222 235
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH-CCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE-YGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~-~gi~ 290 (464)
|++++.++.+ +++.+|.++.. ...+|||||++|+++.... ......+ ....+..++..++.++|. .|++
T Consensus 69 E~~~l~~l~~-----~~i~~p~~~~~--~~~~lVmE~~~g~~~~~~~-l~~~~~~~~~~~~i~~~l~~~l~~lH~~~giv 140 (190)
T cd05145 69 EFRNLKRLYE-----AGVPVPEPILL--KKNVLVMEFIGDDGSPAPR-LKDVPLEEEEAEELYEQVVEQMRRLYQEAGLV 140 (190)
T ss_pred HHHHHHHHHh-----CCCCCceEEEe--cCCEEEEEEecCCCchhhh-hhhccCCHHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 7788888765 35667777653 3469999999998654321 2222333 334455677789999999 9999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMAR 343 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (464)
||||||+||+++ +++++|+|||+++.++... ......+|++.+..
T Consensus 141 HrDlkP~NIll~-~~~~~liDFG~a~~~~~~~-------~~~~~~~~~~~~~~ 185 (190)
T cd05145 141 HGDLSEYNILYH-DGKPYIIDVSQAVELDHPN-------ALEFLRRDIRNINR 185 (190)
T ss_pred cCCCChhhEEEE-CCCEEEEEcccceecCCCC-------HHHHHHHHHHHHHH
Confidence 999999999998 8999999999999887642 22344556665544
No 136
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.88 E-value=8.2e-22 Score=188.99 Aligned_cols=187 Identities=20% Similarity=0.242 Sum_probs=126.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.++.+|+.||+|.+.......... ..++ .++.+....|+++..+.+.+.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~--~~~~----e~~~l~~~~~~~i~~~~~~~~----------- 69 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQK--QILR----ELDILHKCNSPYIVGFYGAFY----------- 69 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHH--HHHH----HHHHHHHCCCCchhhhheeee-----------
Confidence 67999999999999998889999999987553221100 1111 111111222455444333211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH-CCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE-YGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~-~gi~ 290 (464)
..+..+++|||++|++|.++........+.. ..+..++..++.++|+ .|++
T Consensus 70 --------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~ 123 (265)
T cd06605 70 --------------------------NNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKII 123 (265)
T ss_pred --------------------------cCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCee
Confidence 1245689999999999988754332233333 2345667789999999 9999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||+++.+|.++|+|||.+..+....... .......++++.......+.+.|+|++|+.+++++++
T Consensus 124 H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~--------~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g 195 (265)
T cd06605 124 HRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT--------FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATG 195 (265)
T ss_pred cCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc--------ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999987764433222 1222333344444344557789999999999999984
Q ss_pred h
Q 012411 371 A 371 (464)
Q Consensus 371 ~ 371 (464)
.
T Consensus 196 ~ 196 (265)
T cd06605 196 R 196 (265)
T ss_pred C
Confidence 3
No 137
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.88 E-value=5.4e-23 Score=202.43 Aligned_cols=206 Identities=15% Similarity=0.166 Sum_probs=126.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|+++.+++.||||+.+........ . .+.+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~--~------------------------------------~~~~ 53 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAP--C------------------------------------TAIR 53 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcc--h------------------------------------hHHH
Confidence 6899999999999999888999999998643211100 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ . ++++....-+.......++||||+++ ++.+.........+ ....+..++..++.++|+.|++|
T Consensus 54 E~~~l~~l----~-h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH 127 (309)
T cd07872 54 EVSLLKDL----K-HANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLH 127 (309)
T ss_pred HHHHHHhC----C-CCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 11111111 1 12211111112223567899999987 55554322222223 33345567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
||+||+||+++.++.++|+|||++......... .........+..||.+. ..+..+.++|+|++|+.+++++++
T Consensus 128 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~il~el~tg- 201 (309)
T cd07872 128 RDLKPQNLLINERGELKLADFGLARAKSVPTKT-YSNEVVTLWYRPPDVLL----GSSEYSTQIDMWGVGCIFFEMASG- 201 (309)
T ss_pred CCCCHHHEEECCCCCEEECccccceecCCCccc-cccccccccccCCHHHh----CCCCCCcHHHHHHHHHHHHHHHhC-
Confidence 999999999999999999999998764322110 00011112233344331 122346789999999999999984
Q ss_pred ccCCCCcCcHHHHHHHHHH
Q 012411 372 LNSSVSELNFKTIVDGLGA 390 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~ 390 (464)
..++...+..+....+..
T Consensus 202 -~~pf~~~~~~~~~~~~~~ 219 (309)
T cd07872 202 -RPLFPGSTVEDELHLIFR 219 (309)
T ss_pred -CCCCCCCChHHHHHHHHH
Confidence 455655555444444433
No 138
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.88 E-value=3.1e-22 Score=195.65 Aligned_cols=192 Identities=22% Similarity=0.262 Sum_probs=125.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..||+|++|+||+|....+|+.||||+........ .....+.+ ..+....|++++.+.+.+
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~e~----~~l~~l~h~~iv~~~~~~------------ 86 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR---RELLFNEV----VIMRDYQHENVVEMYNSY------------ 86 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhH---HHHHHHHH----HHHHhcCCcchhheeeEE------------
Confidence 56999999999999998899999999875321111 00011111 111112244443333211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
......+++|||++|++|.++........+....+..++..++.++|+.|++|+|
T Consensus 87 -------------------------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~d 141 (292)
T cd06657 87 -------------------------LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141 (292)
T ss_pred -------------------------EeCCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 1124568999999999998764333233333444557788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
++|+||+++.++.++|+|||++..+...... ...+ .+..++++....+..+.+.|+|++|+.+++++++
T Consensus 142 l~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~--------~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg- 212 (292)
T cd06657 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG--------TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG- 212 (292)
T ss_pred CCHHHEEECCCCCEEEcccccceeccccccccccccc--------CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC-
Confidence 9999999999999999999998766433211 1111 1223333333334457789999999999999984
Q ss_pred ccCCCCcC
Q 012411 372 LNSSVSEL 379 (464)
Q Consensus 372 ~~~~~~~~ 379 (464)
..|+...
T Consensus 213 -~~p~~~~ 219 (292)
T cd06657 213 -EPPYFNE 219 (292)
T ss_pred -CCCCCCC
Confidence 3444443
No 139
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.88 E-value=2.4e-22 Score=195.90 Aligned_cols=231 Identities=16% Similarity=0.178 Sum_probs=143.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+++.||+|+.++..... ..... .+..
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~--------------------------------~~~~ 50 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----LKQVE--------------------------------HVLN 50 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hhHHH--------------------------------HHHH
Confidence 67999999999999998889999999986431100 00000 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (464)
|+..+.++ . +++ +++++. ......+++|||++|++|.+..... ...+. ...+..++..++.++|+.|+
T Consensus 51 e~~~l~~l----~-h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i 122 (290)
T cd05580 51 EKRILQSI----R-HPF--LVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDI 122 (290)
T ss_pred HHHHHHhC----C-CCC--ccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 22222211 1 111 111211 2235568999999999998774432 22333 33445678889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|++|.||+++.+|.++|+|||++....... .... +.+..++++...-+..+.+.|+|++|+.++++++
T Consensus 123 ~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~-~~~~--------~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 193 (290)
T cd05580 123 VYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT-YTLC--------GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA 193 (290)
T ss_pred ecCCCCHHHEEECCCCCEEEeeCCCccccCCCC-CCCC--------CCccccChhhhcCCCCCccccHHHHHHHHHHHHh
Confidence 999999999999999999999999998765431 1111 2223333443333445678999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
+ ..++...+.......+.......+..+++.+..+++.+ ...||..|+
T Consensus 194 g--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~-------l~~~p~~R~ 241 (290)
T cd05580 194 G--YPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNL-------LQVDLTKRL 241 (290)
T ss_pred C--CCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHH-------ccCCHHHcc
Confidence 4 44555544333333332222223334556665555555 455666554
No 140
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.87 E-value=5.3e-24 Score=228.63 Aligned_cols=226 Identities=17% Similarity=0.119 Sum_probs=149.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
.-||.|-||+||.|....+|+-.|||-++-.... -..++.++.....+..++|+|++.+...
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-----~k~~~~i~eEm~vlE~lnHpNlV~YyGV------------- 1302 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-----HKTFKLIAEEMKVLEGLNHPNLVRYYGV------------- 1302 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCccc-----cccCcchHHHHHHHHhccCccccccCce-------------
Confidence 4699999999999999989999999977522111 2223333333333333456666554331
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.-.....+|-||||+||+|.+...... ..+-..+.+..|+..++.|||++|||||
T Consensus 1303 ------------------------EvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHR 1358 (1509)
T KOG4645|consen 1303 ------------------------EVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHR 1358 (1509)
T ss_pred ------------------------eecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceec
Confidence 111234569999999999999754332 2233456777889999999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHH---HHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcchHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEAR---FAIIGHVVHMVNRDYEAMARDYYALD---FLSPDVDVTPIVPALRN 366 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~D~~sl~~~l~~ 366 (464)
||||.||+++.+|-+|+.|||.+..+..... ..+-+++ +.|-+||++.+.-. .-....|+||+||.+-|
T Consensus 1359 DIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~-----GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlE 1433 (1509)
T KOG4645|consen 1359 DIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMM-----GTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLE 1433 (1509)
T ss_pred CCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhc-----CCchhcCchhhcccccCCCCcchhhhcccceEEE
Confidence 9999999999999999999999998755421 1122232 23334444443111 11346799999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 367 FFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
|.+ +..|+.+++.. ..-+.++...+...+|..+....+.+
T Consensus 1434 M~t--GkrPW~~~dne--~aIMy~V~~gh~Pq~P~~ls~~g~dF 1473 (1509)
T KOG4645|consen 1434 MAT--GKRPWAELDNE--WAIMYHVAAGHKPQIPERLSSEGRDF 1473 (1509)
T ss_pred eec--CCCchhhccch--hHHHhHHhccCCCCCchhhhHhHHHH
Confidence 998 45677665421 11134445566677776655555554
No 141
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.87 E-value=1.1e-21 Score=190.98 Aligned_cols=237 Identities=16% Similarity=0.161 Sum_probs=143.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||+|+..+....... .+..+..
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~------------------------------------~~~~~~~ 49 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRK------------------------------------GESMALN 49 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhh------------------------------------HHHHHHH
Confidence 6799999999999999889999999998654211100 0001122
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++. +..-+.+...+ ...+..+++|||++|++|.+...... .+.+.. ..+..++..++.++|+.|++
T Consensus 50 E~~il~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ii 124 (285)
T cd05632 50 EKQILEKVN----SQFVVNLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTV 124 (285)
T ss_pred HHHHHHHcC----CcCceeEEEEE-ecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 332222221 11112222222 23456789999999999987643322 223333 34556788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||+++.++.++|+|||++..+...... ........+..|| ....+..+.++|+|++|+.+++++++
T Consensus 125 H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~g~~~~~aPE-----~~~~~~~~~~~Di~slG~~l~~l~~g 197 (285)
T cd05632 125 YRDLKPENILLDDYGHIRISDLGLAVKIPEGESI--RGRVGTVGYMAPE-----VLNNQRYTLSPDYWGLGCLIYEMIEG 197 (285)
T ss_pred ecCCCHHHEEECCCCCEEEecCCcceecCCCCcc--cCCCCCcCccChH-----HhcCCCCCcccchHHHHHHHHHHHhC
Confidence 9999999999999999999999998765432110 0111112223344 33344457789999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHh----hCCCCCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLY----QYPFNVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
..|+...+.......+..... .++..+++.+..++..+ ...||.-|+.
T Consensus 198 --~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~~P~~R~~ 249 (285)
T cd05632 198 --QSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKML-------LTKDPKQRLG 249 (285)
T ss_pred --CCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHH-------ccCCHhHcCC
Confidence 456554443322333322222 22233445554444443 5566655554
No 142
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.87 E-value=2.6e-22 Score=196.99 Aligned_cols=194 Identities=20% Similarity=0.274 Sum_probs=119.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|+.+.+|+.||||+++....... .. .+.+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~------------------------------------~~~~ 52 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGT--PF------------------------------------TAIR 52 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEecccccccc--ch------------------------------------hHHH
Confidence 789999999999999988899999999863311100 00 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|+..+.++ +++++....-+.......++||||++| ++.+.......+... ...+..++..|+.|+|+.|++|
T Consensus 53 E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 126 (303)
T cd07869 53 EASLLKGL-----KHANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILH 126 (303)
T ss_pred HHHHHhhC-----CCCCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 11111111 112222111122234567899999976 444433222222333 3445577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+|||++.+|.++|+|||++........ .......+..+..||.+. .....+..+|+||+|+.+++++++.
T Consensus 127 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwslG~il~~l~~g~ 201 (303)
T cd07869 127 RDLKPQNLLISDTGELKLADFGLARAKSVPSH-TYSNEVVTLWYRPPDVLL----GSTEYSTCLDMWGVGCIFVEMIQGV 201 (303)
T ss_pred CCCCHHHEEECCCCCEEECCCCcceeccCCCc-cCCCCcccCCCCChHHHc----CCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999875432111 001111122233444331 1123466789999999999999843
Q ss_pred ccCCCCc
Q 012411 372 LNSSVSE 378 (464)
Q Consensus 372 ~~~~~~~ 378 (464)
.++.+
T Consensus 202 --~pf~~ 206 (303)
T cd07869 202 --AAFPG 206 (303)
T ss_pred --CCCCC
Confidence 44443
No 143
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.87 E-value=4.5e-22 Score=189.72 Aligned_cols=207 Identities=18% Similarity=0.172 Sum_probs=130.9
Q ss_pred cccccceecEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|+||.||+|..... +..|+||+.+...... .. +.+......+....|+++..+.+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~---~~---~~~~~e~~~l~~~~~~~i~~~~~----------- 63 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE---ER---KDFLKEARVMKKLGHPNVVRLLG----------- 63 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh---HH---HHHHHHHHHHhhcCCCChheeee-----------
Confidence 4699999999999999755 8899999987653321 00 00100111111111222222221
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH--------hcCCCHH--HHHHHHHHHH
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE--------SQGLKVL--DLVNTGIQCS 280 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~--------~~~~~~~--~~~~~~i~~~ 280 (464)
+.......+++|||++|++|.+..... ....+.. ..+..++..+
T Consensus 64 --------------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 117 (262)
T cd00192 64 --------------------------VCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117 (262)
T ss_pred --------------------------eecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHH
Confidence 111245678999999999999875543 1233333 3445667789
Q ss_pred HHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 012411 281 LRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (464)
Q Consensus 281 l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl 360 (464)
+.++|+.|++|+|++|+||+++.++.++|+|||.+..+......... ......+..++++....+..+.++|+|++
T Consensus 118 l~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 193 (262)
T cd00192 118 MEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKK----TGGKLPIRWMAPESLKDGIFTSKSDVWSF 193 (262)
T ss_pred HHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccc----cCCCcCccccCHHHhccCCcchhhccHHH
Confidence 99999999999999999999999999999999999877543210000 00111222334444444456788999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 012411 361 VPALRNFFDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (464)
|+.++++++. ...|+...+...+...+
T Consensus 194 G~il~~l~~~-g~~p~~~~~~~~~~~~~ 220 (262)
T cd00192 194 GVLLWEIFTL-GATPYPGLSNEEVLEYL 220 (262)
T ss_pred HHHHHHHHhc-CCCCCCCCCHHHHHHHH
Confidence 9999999873 23555555544444333
No 144
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.87 E-value=2.5e-22 Score=203.38 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 012411 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (464)
Q Consensus 273 ~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (464)
+..++..++.|+|+.|++|+|+||.|||++.++.++|+|||++..+.........+. ....+.+++++....+..+
T Consensus 219 ~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~ 294 (375)
T cd05104 219 FSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGN----ARLPVKWMAPESIFNCVYT 294 (375)
T ss_pred HHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCC----CCCCcceeChhHhcCCCCC
Confidence 346778899999999999999999999999999999999999987644321111111 0011123334444445568
Q ss_pred CCCCcchHHHHHHHHHH
Q 012411 353 PDVDVTPIVPALRNFFD 369 (464)
Q Consensus 353 ~~~D~~sl~~~l~~~~~ 369 (464)
.++|+||+|+.++++++
T Consensus 295 ~~sDi~slG~~l~ellt 311 (375)
T cd05104 295 FESDVWSYGILLWEIFS 311 (375)
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 89999999999999987
No 145
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.87 E-value=7e-22 Score=189.15 Aligned_cols=199 Identities=18% Similarity=0.182 Sum_probs=125.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|++|.||+|....+|+.||||+.+......... .+ ++..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~----~~--------------------------------~~~~ 45 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQ----VT--------------------------------NVKA 45 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHH----HH--------------------------------HHHH
Confidence 57999999999999998889999999986431110000 00 0000
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|... .....++++ +++++. ...+..+++|||++|++|.++..... ........+..++..++.++|+.|++
T Consensus 46 e~~~----~~~~~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~ 119 (260)
T cd05611 46 ERAI----MMIQGESPY--VAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGII 119 (260)
T ss_pred HHHH----HhhcCCCCC--eeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 0000 000011222 222222 22345689999999999988753221 22333445567788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|++|.||+++.++.++|+|||++....... .. .+.+..++++....+..+.+.|+|++|+.++++++
T Consensus 120 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--~~--------~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~- 188 (260)
T cd05611 120 HRDIKPENLLIDQTGHLKLTDFGLSRNGLENK--KF--------VGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLF- 188 (260)
T ss_pred cCCCCHHHeEECCCCcEEEeecccceeccccc--cC--------CCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHH-
Confidence 99999999999999999999999887643211 01 11222233333333345778999999999999998
Q ss_pred hccCCCCcCcHHHHHH
Q 012411 371 ALNSSVSELNFKTIVD 386 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~ 386 (464)
...|+...+...+..
T Consensus 189 -g~~p~~~~~~~~~~~ 203 (260)
T cd05611 189 -GYPPFHAETPDAVFD 203 (260)
T ss_pred -CCCCCCCCCHHHHHH
Confidence 345555555444443
No 146
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.87 E-value=1.5e-22 Score=194.89 Aligned_cols=202 Identities=14% Similarity=0.172 Sum_probs=125.9
Q ss_pred cccccceecEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|+||.||+|+++ ..+..||+|+.+........ . +
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~--~------------------------------------~ 52 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQR--R------------------------------------G 52 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHH--H------------------------------------H
Confidence 67999999999999875 34678999998754221100 0 1
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceee--ccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE 286 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~ 286 (464)
+..|...+.++ ++++ +++++ .......++||||++|++|.++........... ..+..++..++.|+|+
T Consensus 53 ~~~e~~~l~~l-----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~ 125 (266)
T cd05064 53 FLAEALTLGQF-----DHSN--IVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSE 125 (266)
T ss_pred HHHHHHHHhcC-----CCCC--cCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11122211111 1122 11221 123456789999999999988754332233333 3445677789999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
.|++|+|+||.||+++.++.++++|||.....................+..|| .+..+..+.++|+||+|+.+++
T Consensus 126 ~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~l~e 200 (266)
T cd05064 126 MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPE-----AIQYHHFSSASDVWSFGIVMWE 200 (266)
T ss_pred CCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHH-----HHhhCCccchhHHHHHHHHHHH
Confidence 99999999999999999999999999987654322110000000011233344 3344556788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHH
Q 012411 367 FFDDALNSSVSELNFKTIVD 386 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~ 386 (464)
++.. ...|+...+..++..
T Consensus 201 ll~~-g~~p~~~~~~~~~~~ 219 (266)
T cd05064 201 VMSY-GERPYWDMSGQDVIK 219 (266)
T ss_pred HhcC-CCCCcCcCCHHHHHH
Confidence 7752 345665555444443
No 147
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.2e-22 Score=201.89 Aligned_cols=259 Identities=19% Similarity=0.243 Sum_probs=165.8
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.+|-|+||.||+|..+.++--.|-|++--.....+..-+- .++.+..-.||+++.+++.|.
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylV-------EIeILa~CdHP~ivkLl~ayy------------ 99 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLV-------EIEILAECDHPVIVKLLSAYY------------ 99 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhh-------hhhhhhcCCChHHHHHHHHHh------------
Confidence 3899999999999998788888889875433322211111 111122223555555555432
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh--cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
+.+..|+..|||.||.++.+...-. ...+..+++.++++.+|.|||+.+||||
T Consensus 100 -------------------------~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHR 154 (1187)
T KOG0579|consen 100 -------------------------FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHR 154 (1187)
T ss_pred -------------------------ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhh
Confidence 3478899999999999887643222 2345667888899999999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|.||||++-+|.|+|+|||.+...... .|.+++|+.+.|+ |+.++.+...---++.++|+||||.++.+|..
T Consensus 155 DLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMA---PEVvmCET~KD~PYDykaDiWSlGITLIEMAq- 230 (1187)
T KOG0579|consen 155 DLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMA---PEVVMCETFKDQPYDYKADIWSLGITLIEMAQ- 230 (1187)
T ss_pred hccccceEEEecCcEeeecccccccchhHHhhhccccCCccccc---chheeeccccCCCchhhhhHHhhhhHHHHHhc-
Confidence 99999999999999999999998876443 4555666643332 44433322222234667899999999999987
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCC--CChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHHHhcCCCCHH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFN--VPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAKRLLTDPNPY 445 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~~l~~~~~p~ 445 (464)
..+|-.+.+.-.++ .++...-|.. -|..+..-++.++. .|+.-||+-++.+. .|||+.. .+.+..
T Consensus 231 -iEPPHhelnpMRVl---lKiaKSePPTLlqPS~Ws~~F~DfLk---~cL~Knp~~Rp~aaqll~Hpfv~~---~~SnK~ 300 (1187)
T KOG0579|consen 231 -IEPPHHELNPMRVL---LKIAKSEPPTLLQPSHWSRSFSDFLK---RCLVKNPRNRPPAAQLLKHPFVQN---APSNKM 300 (1187)
T ss_pred -cCCCccccchHHHH---HHHhhcCCCcccCcchhhhHHHHHHH---HHHhcCCccCCCHHHHhhCccccc---CCcchH
Confidence 45565555543333 3444433332 24444444444433 45666777776554 4666531 133345
Q ss_pred HHHHHH
Q 012411 446 LRDALV 451 (464)
Q Consensus 446 ~r~~~~ 451 (464)
+|..+.
T Consensus 301 ireLlA 306 (1187)
T KOG0579|consen 301 IRELLA 306 (1187)
T ss_pred HHHHHH
Confidence 555554
No 148
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=5.9e-23 Score=207.85 Aligned_cols=240 Identities=15% Similarity=0.131 Sum_probs=166.1
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.-.+|+|.+|.||-|++..+....|||.+...-. .+.+-+.+|+.+.
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds---------------------------------r~~QPLhEEIaLH 626 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS---------------------------------REVQPLHEEIALH 626 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccc---------------------------------hhhccHHHHHHHH
Confidence 3579999999999999998888999998753211 1112233444443
Q ss_pred H--HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc----CCCHHHHHHHHHHHHHHHHHH
Q 012411 213 Q--EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ----GLKVLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 213 ~--Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~----~~~~~~~~~~~i~~~l~~lh~ 286 (464)
. .++|+.++...++.+..+. |.||-++||+|+++....-. +......+..||..+|+|+|+
T Consensus 627 ~~LrHkNIVrYLGs~senGf~k-------------IFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe 693 (1226)
T KOG4279|consen 627 STLRHKNIVRYLGSVSENGFFK-------------IFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE 693 (1226)
T ss_pred HHHhhHhHHHHhhccCCCCeEE-------------EEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh
Confidence 3 2557777766666555444 99999999999998554322 234556788999999999999
Q ss_pred CCcccCCCCCcceEEc-cCCcEEEEecCCCCcCCH--HHHHHHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcchHH
Q 012411 287 YGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPE--EARFAIIGHVVHMVNRDYEAMARDYYALDF--LSPDVDVTPIV 361 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~-~~g~i~l~DFGl~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~D~~sl~ 361 (464)
..|+|||||-.|+||+ -.|-+||.|||.++++.. ...++++|++.+| ++++++-|. +++.+|+||||
T Consensus 694 n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYM--------APEvIDqG~RGYG~aADIWS~G 765 (1226)
T KOG4279|consen 694 NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM--------APEVIDQGPRGYGKAADIWSFG 765 (1226)
T ss_pred cceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhh--------ChHhhccCCcCCCchhhhhhcc
Confidence 9999999999999997 678999999999988743 2345666665444 455555552 47789999999
Q ss_pred HHHHHHHHHhccCCCCcCcH-HHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHhhhHHHH
Q 012411 362 PALRNFFDDALNSSVSELNF-KTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFA 435 (464)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~ 435 (464)
|++-||.+ +.+|+-+... +..+ ....+++.+..+|.++..-.|.++. +++.|+..--..|+..+.
T Consensus 766 CT~vEMAT--GrPPF~ElgspqAAM--FkVGmyKvHP~iPeelsaeak~Fil-----rcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 766 CTMVEMAT--GRPPFVELGSPQAAM--FKVGMYKVHPPIPEELSAEAKNFIL-----RCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ceeEeecc--CCCCeeecCChhHhh--hhhcceecCCCCcHHHHHHHHHHHH-----HHcCCCcccCccHHHhcc
Confidence 99999998 4456554431 2111 2234566777888888777777754 455554444334444433
No 149
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.87 E-value=1.4e-21 Score=191.53 Aligned_cols=185 Identities=21% Similarity=0.248 Sum_probs=124.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..||.|+||.||+|.+..+|+.||||+......... -.+.+. +..+....|+++..+++.+.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~---~~~~~e----~~~l~~l~hp~i~~~~~~~~----------- 88 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRR---ELLFNE----VVIMRDYQHQNVVEMYKSYL----------- 88 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchH---HHHHHH----HHHHHhCCCCchhhhhhhee-----------
Confidence 469999999999999987899999999864321110 001111 11122234666655555322
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
.....+++|||++|++|.+..............+..++..++.++|+.|++|+|
T Consensus 89 --------------------------~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~d 142 (297)
T cd06659 89 --------------------------VGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142 (297)
T ss_pred --------------------------eCCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 124567999999999998764332222233334556788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
++|+||+++.++.++|+|||++..+..... ....+ ....++++....+..+.+.|+|++|+.+++++.+
T Consensus 143 l~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~--------~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g 213 (297)
T cd06659 143 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG--------TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDG 213 (297)
T ss_pred CCHHHeEEccCCcEEEeechhHhhcccccccccceec--------CccccCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999999999999999876543321 11111 1222333333334457789999999999999984
No 150
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.87 E-value=1e-21 Score=187.19 Aligned_cols=197 Identities=15% Similarity=0.107 Sum_probs=128.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|+...+|+.|++|......... .+.. .+......+....|+|+..+++.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~---~~~~e~~~l~~l~h~~i~~~~~~~------------ 68 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--RERE---EAIDEARVLAKLDSSYIIRYYESF------------ 68 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--HHHH---HHHHHHHHHHhcCCCCeehheeee------------
Confidence 67999999999999998899999999875321110 0000 000001111112234333332211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHH--HHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLD--LVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~--~~~~~i~~~l~~lh~~gi~ 290 (464)
......+++|||++|++|.+..... ....+... .+..++..++.++|+.|++
T Consensus 69 -------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~ 123 (256)
T cd08529 69 -------------------------LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKIL 123 (256)
T ss_pred -------------------------ccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 1224568999999999998875433 22334333 3345677899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||++++++.++|+|||++..+....... ....+.+..+++++...+..+.++|+|++|+.+++++++
T Consensus 124 h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 197 (256)
T cd08529 124 HRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA------NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTG 197 (256)
T ss_pred cCCCCcceEEEeCCCCEEEcccccceeccCccchh------hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhC
Confidence 99999999999999999999999988765432110 001122333444555555567889999999999999984
Q ss_pred hccCCCCcCc
Q 012411 371 ALNSSVSELN 380 (464)
Q Consensus 371 ~~~~~~~~~~ 380 (464)
..|+...+
T Consensus 198 --~~p~~~~~ 205 (256)
T cd08529 198 --KHPFDANN 205 (256)
T ss_pred --CCCCCCCC
Confidence 34554444
No 151
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.87 E-value=1.1e-22 Score=197.45 Aligned_cols=191 Identities=14% Similarity=0.135 Sum_probs=120.6
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQE 214 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~E 214 (464)
.||+|+||.||+|.+..+|+.||||+.++.....-..+. .+..|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~------------------------------------~~~~~ 44 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET------------------------------------LALNE 44 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHH------------------------------------HHHHH
Confidence 389999999999999878999999998654211000000 00001
Q ss_pred HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 215 GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 215 a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
. .+.++... .+++.+....-+.......++||||++|++|.+...... ........+..++..++.++|+.|++|+|
T Consensus 45 ~-~~~~~~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~d 122 (279)
T cd05633 45 R-IMLSLVST-GDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRD 122 (279)
T ss_pred H-HHHHHHhh-CCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCC
Confidence 0 01111111 122333222222223456789999999999987643221 12223334557788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+||+||+++.++.++|+|||++............ +....++++....+ ..+.++|+|++|+.+++++++.
T Consensus 123 ikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~--------~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~ 193 (279)
T cd05633 123 LKPANILLDEHGHVRISDLGLACDFSKKKPHASV--------GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGH 193 (279)
T ss_pred CCHHHEEECCCCCEEEccCCcceeccccCccCcC--------CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 9999999999999999999998765432211111 22233333333222 3477899999999999999843
No 152
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.87 E-value=2.5e-22 Score=192.82 Aligned_cols=200 Identities=17% Similarity=0.160 Sum_probs=127.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|....+++.||+|+...+.... . ..++. ...+....|++++.+.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~---~~~~e----~~~l~~l~h~~i~~~~~-------------- 69 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-E---EFLKE----AAVMKEIKHPNLVQLLG-------------- 69 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchHH-H---HHHHH----HHHHHhCCCCChhheEE--------------
Confidence 67999999999999998789999999986542110 0 00000 00111112333333222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
+.......+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 70 -----------------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 126 (263)
T cd05052 70 -----------------------VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 126 (263)
T ss_pred -----------------------EEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 1112355689999999999988754322 223333 33457788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||++++++.++|+|||++................ .+..++++....+..+.+.|+|++|+.++++++.
T Consensus 127 H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~-----~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~ 201 (263)
T cd05052 127 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-----PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 201 (263)
T ss_pred ecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCC-----ccccCCHHHhccCCCCchhHHHHHHHHHHHHHcC
Confidence 99999999999999999999999988765432111111100 1122333333444557789999999999999972
Q ss_pred hccCCCCcCcHHHH
Q 012411 371 ALNSSVSELNFKTI 384 (464)
Q Consensus 371 ~~~~~~~~~~~~~~ 384 (464)
...++...+..+.
T Consensus 202 -g~~p~~~~~~~~~ 214 (263)
T cd05052 202 -GMSPYPGIDLSQV 214 (263)
T ss_pred -CCCCCCCCCHHHH
Confidence 3345544444433
No 153
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.87 E-value=1.7e-22 Score=204.54 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 272 ~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
.+..++..++.|||+.|++|||+||.|||+++++.++|+|||++..+.........+.. ...+.+++++....+..
T Consensus 216 ~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~----~~~~~y~aPE~~~~~~~ 291 (374)
T cd05106 216 RFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA----RLPVKWMAPESIFDCVY 291 (374)
T ss_pred HHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC----CCccceeCHHHhcCCCC
Confidence 34567888999999999999999999999999999999999998876433211111110 01112333333344556
Q ss_pred CCCCCcchHHHHHHHHHH
Q 012411 352 SPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~ 369 (464)
+.++|+||+|+.++++++
T Consensus 292 ~~~~DvwSlGvil~ellt 309 (374)
T cd05106 292 TVQSDVWSYGILLWEIFS 309 (374)
T ss_pred CccccHHHHHHHHHHHHh
Confidence 889999999999999986
No 154
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.87 E-value=2.3e-22 Score=193.13 Aligned_cols=208 Identities=15% Similarity=0.115 Sum_probs=126.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..||+|++|+||+|.+..+++.||+|+.......... .....++.+.+.+|++
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~------------------------~~~~~~~~~~~~~e~~--- 58 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASS------------------------KDRKRSMLDALAREIA--- 58 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccch------------------------hHHHHHHHHHHHHHHH---
Confidence 6799999999999999878999999988643211000 0000111112222222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.+.++ . ++++.-..-+.......+++|||++|++|.++.... .........+..++..++.++|+.|++|+
T Consensus 59 ---~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~ 130 (267)
T cd06628 59 ---LLKEL----Q-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHR 130 (267)
T ss_pred ---HHHhc----C-CCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 22222 1 222211111222345678999999999998775322 11222333455778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
|++|.||++++++.++|+|||++..+.................+....++++.+..+..+...|+|++|+.+++++++
T Consensus 131 di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g-- 208 (267)
T cd06628 131 DIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG-- 208 (267)
T ss_pred cCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhC--
Confidence 999999999999999999999988765321100000000000111223333444444557789999999999999984
Q ss_pred cCCCCc
Q 012411 373 NSSVSE 378 (464)
Q Consensus 373 ~~~~~~ 378 (464)
..|+..
T Consensus 209 ~~p~~~ 214 (267)
T cd06628 209 KHPFPD 214 (267)
T ss_pred CCCCCC
Confidence 345443
No 155
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.5e-22 Score=183.83 Aligned_cols=195 Identities=20% Similarity=0.274 Sum_probs=136.9
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.|||-|+||.||..++.++|+.||+|.. |++.+.+..--...+.++- +..++|.|+...++-+.- -.+||-
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~-pnvfq~L~s~krvFre~km----LcfFkHdNVLSaLDILQP---ph~dfF 129 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKM-PNVFQNLASCKRVFREIKM----LSSFRHDNVLSLLDILQP---ANPSFF 129 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhc-chHHHHHHHHHHHHHHHHH----HHhhccccHHHHHHhcCC---CCchHH
Confidence 57999999999999999999999999986 4444444433334433332 223456666666553321 112222
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHH-HHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.| .|.++|.+.. +|..++. -....-+-.++...+|..+++|+|+.||.|
T Consensus 130 qE-----------------------------iYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILH 179 (449)
T KOG0664|consen 130 QE-----------------------------LYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILH 179 (449)
T ss_pred HH-----------------------------HHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhh
Confidence 22 2244444432 2322211 111223445667789999999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|||||||+|++.+..+||+|||+++.-+.+.+..++.-+.+-.++.||.+...- .++..+|+||+||++.|++.
T Consensus 180 RDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaR----hYs~AvDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 180 RDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGAR----RYTGAVDIWSVGCIFAELLQ 253 (449)
T ss_pred ccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcch----hhcCccceehhhHHHHHHHh
Confidence 999999999999999999999999998888888888888888888888764321 23778999999999999886
No 156
>PHA02988 hypothetical protein; Provisional
Probab=99.87 E-value=7.9e-22 Score=191.93 Aligned_cols=202 Identities=17% Similarity=0.128 Sum_probs=128.8
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
...||+|++|.||+|.+ +|+.||||+.+...... -..++ . +.
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~----~~~~~--------------------------~------~~ 66 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGH----KVLID--------------------------I------TE 66 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEecccccccc----HHHHH--------------------------H------HH
Confidence 45799999999999998 79999999987432110 00001 1 11
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeec---c---CCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFW---D---YTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLL 285 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~---~---~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh 285 (464)
+|...+.++. +++ +.+++. + .....+++|||++|++|.+...... ........+..++..++.++|
T Consensus 67 ~E~~~l~~l~-----h~n--Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH 139 (283)
T PHA02988 67 NEIKNLRRID-----SNN--ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLY 139 (283)
T ss_pred HHHHHHHhcC-----CCC--EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHH
Confidence 2222222221 111 122221 1 1235689999999999998754321 122333344567778999999
Q ss_pred H-CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 286 E-YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 286 ~-~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
. .|++|||+||.||+++.+|.++|+|||++..+..... ...+ ...+..||.+... .+..+.++|+||+|+.+
T Consensus 140 ~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~---~~~y~aPE~~~~~---~~~~~~k~Di~SlGvil 212 (283)
T PHA02988 140 KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF-KNVN---FMVYFSYKMLNDI---FSEYTIKDDIYSLGVVL 212 (283)
T ss_pred hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccc-cccC---cccccCHHHhhhc---cccccchhhhhHHHHHH
Confidence 8 5999999999999999999999999999876543211 1111 1233445544321 13457899999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHH
Q 012411 365 RNFFDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l 388 (464)
+++++ ...|+...+..++...+
T Consensus 213 ~el~~--g~~Pf~~~~~~~~~~~i 234 (283)
T PHA02988 213 WEIFT--GKIPFENLTTKEIYDLI 234 (283)
T ss_pred HHHHH--CCCCCCCCCHHHHHHHH
Confidence 99999 45677766655554433
No 157
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.87 E-value=2.1e-22 Score=192.90 Aligned_cols=201 Identities=14% Similarity=0.076 Sum_probs=126.6
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.||+|++|.||+|....+|++||+|+.+....... ....+. ++.
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~--~~~~~~--------------------------------~~~ 52 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPE--TKKEVN--------------------------------ALE 52 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchh--hHHHHH--------------------------------HHH
Confidence 3789999999999999987899999999864421110 000000 112
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
+|...+.++ +++++....-+.......+++|||++|++|.+...... ........+..++..++.++|+.|++|
T Consensus 53 ~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H 127 (263)
T cd06625 53 CEIQLLKNL-----QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVH 127 (263)
T ss_pred HHHHHHHhC-----CCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 222222222 22333222222333456789999999999987643221 122333445577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH--HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI--IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+||+||+++.+++++|+|||++..+........ ........+..||.+ .....+.+.|+|++|+.++++++
T Consensus 128 ~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~slG~il~el~~ 202 (263)
T cd06625 128 RDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVI-----SGEGYGRKADVWSVGCTVVEMLT 202 (263)
T ss_pred CCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCccee-----ccCCCCchhhhHHHHHHHHHHHh
Confidence 99999999999999999999999876643221110 000011122233332 23335678999999999999998
Q ss_pred HhccCCCCcC
Q 012411 370 DALNSSVSEL 379 (464)
Q Consensus 370 ~~~~~~~~~~ 379 (464)
+ ..|+...
T Consensus 203 g--~~p~~~~ 210 (263)
T cd06625 203 E--KPPWAEF 210 (263)
T ss_pred C--CCCcccc
Confidence 4 3454443
No 158
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.87 E-value=5e-22 Score=192.40 Aligned_cols=198 Identities=21% Similarity=0.261 Sum_probs=126.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|.+..+++.||+|+.......... ++..
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~---------------------------------------~~~~ 51 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELE---------------------------------------DFMV 51 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHH---------------------------------------HHHH
Confidence 5699999999999999878999999998754222110 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|+..+.++ . ++++.-..-+.......++||||++|++|.++.......++ ....+..++..++.++|+.|++|
T Consensus 52 e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h 126 (280)
T cd06611 52 EIDILSEC----K-HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIH 126 (280)
T ss_pred HHHHHHhC----C-CCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 22211111 1 12221111111223556899999999999887543222333 33445577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|++|.||+++.++.++|+|||++....... +....++ ..+..||.+..........+.++|+|++|+.++++++
T Consensus 127 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~---~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~ 203 (280)
T cd06611 127 RDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGT---PYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQ 203 (280)
T ss_pred CCCChhhEEECCCCCEEEccCccchhhcccccccceeecc---hhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999887653321 1111122 2233455443222222334668999999999999998
Q ss_pred HhccCCCCcCc
Q 012411 370 DALNSSVSELN 380 (464)
Q Consensus 370 ~~~~~~~~~~~ 380 (464)
+ ..|+...+
T Consensus 204 g--~~p~~~~~ 212 (280)
T cd06611 204 M--EPPHHELN 212 (280)
T ss_pred C--CCCcccCC
Confidence 4 34554444
No 159
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.87 E-value=5.5e-22 Score=195.84 Aligned_cols=188 Identities=18% Similarity=0.195 Sum_probs=117.4
Q ss_pred CcccccceecEEEEEEEc--cCCcEEEEEEecCCh-HHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 133 PSPIAAASLGQVYKAQLK--YSGQIVAVKVQRPGI-EEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~-~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
...||+|+||.||+|+++ .+++.||+|+..... ......++.+++ ...|+|++.+.+.+..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~----------~l~h~niv~~~~~~~~------ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLR----------ELKHPNVISLQKVFLS------ 69 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHH----------hcCCCCCcceeeeEec------
Confidence 468999999999999975 356899999886431 112222222222 1235555444332110
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh----------cCCCHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES----------QGLKVLDLVNTGIQC 279 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~----------~~~~~~~~~~~~i~~ 279 (464)
......+++|||+++ +|.+...... ........+..++..
T Consensus 70 -----------------------------~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~ 119 (317)
T cd07868 70 -----------------------------HADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 119 (317)
T ss_pred -----------------------------CCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHH
Confidence 112345799999976 5554432211 112233456678889
Q ss_pred HHHHHHHCCcccCCCCCcceEE----ccCCcEEEEecCCCCcCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 012411 280 SLRQLLEYGYFHADPHPGNLLA----TPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFLSP 353 (464)
Q Consensus 280 ~l~~lh~~gi~H~Dlkp~Nili----~~~g~i~l~DFGl~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (464)
++.|||+.|++||||||+|||+ +.++.++|+|||++..+...... .......+..+..||.+. .....+.
T Consensus 120 al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~----~~~~~~~ 195 (317)
T cd07868 120 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL----GARHYTK 195 (317)
T ss_pred HHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHc----CCCCcCc
Confidence 9999999999999999999999 45678999999999876432110 011111122233444331 1123577
Q ss_pred CCCcchHHHHHHHHHHH
Q 012411 354 DVDVTPIVPALRNFFDD 370 (464)
Q Consensus 354 ~~D~~sl~~~l~~~~~~ 370 (464)
++|+||+|+.+++++++
T Consensus 196 ~~DiwslG~il~el~~g 212 (317)
T cd07868 196 AIDIWAIGCIFAELLTS 212 (317)
T ss_pred hhhHHHHHHHHHHHHhC
Confidence 89999999999999984
No 160
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.87 E-value=3.7e-22 Score=200.76 Aligned_cols=177 Identities=16% Similarity=0.199 Sum_probs=121.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|+...+++.||+|+...... ..+..+++ ...|+|++.+++.+.
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~---~~E~~~l~----------~l~h~~iv~~~~~~~----------- 127 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT---LIEAMLLQ----------NVNHPSVIRMKDTLV----------- 127 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc---HHHHHHHH----------hCCCCCCcChhheEE-----------
Confidence 789999999999999988889999998654321 11222222 234666666554321
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.....++|||++.| +|.+.........+. ...+..++..+|.|+|+.|++|
T Consensus 128 --------------------------~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 180 (357)
T PHA03209 128 --------------------------SGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIH 180 (357)
T ss_pred --------------------------eCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 12345799999976 565553332333333 3345577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHH-HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA-RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|||||+|||++.++.++|+|||++....... .....++ +.+++++.+..+..+.++|+|++|+.+++++.
T Consensus 181 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt--------~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~ 251 (357)
T PHA03209 181 RDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGT--------VETNAPEVLARDKYNSKADIWSAGIVLFEMLA 251 (357)
T ss_pred CCCCHHHEEECCCCCEEEecCccccccccCccccccccc--------ccccCCeecCCCCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999999987532221 1112222 22333333333445788999999999999986
No 161
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.87 E-value=2e-21 Score=192.15 Aligned_cols=213 Identities=18% Similarity=0.208 Sum_probs=134.2
Q ss_pred HHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCH
Q 012411 115 CIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDV 194 (464)
Q Consensus 115 ~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i 194 (464)
+....++.+++..|... +.||+|+||+||+|+...+|+.||+|+.........
T Consensus 14 ~~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~------------------------- 66 (317)
T cd06635 14 IAELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN------------------------- 66 (317)
T ss_pred HHHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch-------------------------
Confidence 44555677788777765 679999999999999987899999999864311100
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--H
Q 012411 195 VALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--L 272 (464)
Q Consensus 195 ~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~ 272 (464)
+.... +..|+..+.++ . ++++.-..-+.......++||||+.| ++.+.........+... .
T Consensus 67 -----~~~~~------~~~e~~~l~~l----~-h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~ 129 (317)
T cd06635 67 -----EKWQD------IIKEVKFLQRI----K-HPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAA 129 (317)
T ss_pred -----HHHHH------HHHHHHHHHhC----C-CCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHH
Confidence 00011 11222222211 1 22222111122224567899999987 66555433333344333 3
Q ss_pred HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 012411 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (464)
Q Consensus 273 ~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (464)
+..++..++.++|+.|++|+|++|+||+++.++.++|+|||++........ ..++ ..+..||.+.. ...+..+
T Consensus 130 i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~---~~y~aPE~~~~--~~~~~~~ 202 (317)
T cd06635 130 ITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANS--FVGT---PYWMAPEVILA--MDEGQYD 202 (317)
T ss_pred HHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCccc--ccCC---ccccChhhhhc--CCCCCCC
Confidence 456777899999999999999999999999999999999999876543211 1111 12223443311 0124467
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCc
Q 012411 353 PDVDVTPIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 353 ~~~D~~sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
.++|+|++|+.+++++++. .|+...+
T Consensus 203 ~~~Dv~slGvil~el~~g~--~p~~~~~ 228 (317)
T cd06635 203 GKVDVWSLGITCIELAERK--PPLFNMN 228 (317)
T ss_pred ccccHHHHHHHHHHHHhCC--CCCCCcc
Confidence 8899999999999999843 4444433
No 162
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.87 E-value=6.6e-22 Score=190.67 Aligned_cols=205 Identities=17% Similarity=0.158 Sum_probs=125.1
Q ss_pred hcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHH
Q 012411 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (464)
Q Consensus 128 f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 207 (464)
|.++..++||+|++|+||+|....+|+.||||..+.........+ .......+.+..
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~ 57 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHD-----------------------SRQKDMVKALRS 57 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccc-----------------------hHHHHHHHHHHH
Confidence 456667899999999999999887899999998763311110000 000001111112
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHH
Q 012411 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLL 285 (464)
Q Consensus 208 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh 285 (464)
|...+.++ . ++++.-..-+.......++||||++|++|.+..... ...+ ....+..++..++.++|
T Consensus 58 ------e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH 125 (272)
T cd06629 58 ------EIETLKDL----D-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLH 125 (272)
T ss_pred ------HHHHHHhc----C-CCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHh
Confidence 22222222 1 222211111223345678999999999998864332 2222 33445577888999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
+.|++|+|++|+||+++.++.++++|||++.......... .........+..||...... ...+.+.|+|++|+.+
T Consensus 126 ~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---~~~~~~~Dv~slG~~l 202 (272)
T cd06629 126 SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYS---QGYSAKVDIWSLGCVV 202 (272)
T ss_pred hCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhcccc---CCCCccchhHHHHHHH
Confidence 9999999999999999999999999999987654221100 00000111222343322110 1246789999999999
Q ss_pred HHHHHH
Q 012411 365 RNFFDD 370 (464)
Q Consensus 365 ~~~~~~ 370 (464)
++++++
T Consensus 203 ~~l~~g 208 (272)
T cd06629 203 LEMFAG 208 (272)
T ss_pred HHHHhC
Confidence 999984
No 163
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.87 E-value=1.3e-21 Score=196.51 Aligned_cols=199 Identities=17% Similarity=0.218 Sum_probs=123.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||||+........-.. ....+.+ ..+....|++++++++.+..
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~E~----~~l~~l~h~~iv~~~~~~~~---------- 86 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHA-KRAYREL----VLMKLVNHKNIIGLLNVFTP---------- 86 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHH-HHHHHHH----HHHHhcCCCCCcceeeeecc----------
Confidence 78999999999999998899999999875321110000 0001111 11111234444444332110
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
....+.....++||||++| +|.+..... ........+..++..++.++|..|++|+|
T Consensus 87 ---------------------~~~~~~~~~~~lv~e~~~~-~l~~~~~~~-l~~~~~~~~~~ql~~aL~~LH~~gi~H~d 143 (353)
T cd07850 87 ---------------------QKSLEEFQDVYLVMELMDA-NLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHRD 143 (353)
T ss_pred ---------------------CCCccccCcEEEEEeccCC-CHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence 0000011345899999976 555543221 23333444567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
+||+||+++.+|.++|+|||++......... ...+ ...+..||. ......+.++|+|++|+.+++++.+.
T Consensus 144 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~---~~~y~aPE~-----~~~~~~~~~~DvwslG~~l~~l~~g~- 214 (353)
T cd07850 144 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAPEV-----ILGMGYKENVDIWSVGCIMGEMIRGT- 214 (353)
T ss_pred CCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcc---cccccCHHH-----HhCCCCCCchhhHhHHHHHHHHHHCC-
Confidence 9999999999999999999999876543210 0111 112233443 33344578899999999999999843
Q ss_pred cCCCCcCc
Q 012411 373 NSSVSELN 380 (464)
Q Consensus 373 ~~~~~~~~ 380 (464)
.++...+
T Consensus 215 -~pf~~~~ 221 (353)
T cd07850 215 -VLFPGTD 221 (353)
T ss_pred -CCCCCCC
Confidence 4444333
No 164
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.87 E-value=1.2e-21 Score=187.24 Aligned_cols=204 Identities=21% Similarity=0.169 Sum_probs=126.7
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||+|++|+||+|++..+|+.|++|+........ . .....+......+....|+|+..+.+.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~-~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~------------- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR-K---NQVDQVLTERDILSQAQSPYVVKLYYSFQ------------- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh-h---hHHHHHHHHHHHHHhCCCcchhHHHHhee-------------
Confidence 689999999999998789999999986542211 0 11111111111222233555555443221
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
.....+++|||++|++|.++..... ..+ ....+..++..++.++|+.|++|+|
T Consensus 64 ------------------------~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~d 118 (265)
T cd05579 64 ------------------------GKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRD 118 (265)
T ss_pred ------------------------cCcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCC
Confidence 1245679999999999987744321 233 3334557788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHH--HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFA--IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
++|.||++++++.++|+|||++.......... ...........+...++++....+..+.+.|+|++|+.+++++++
T Consensus 119 i~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g- 197 (265)
T cd05579 119 LKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG- 197 (265)
T ss_pred CCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhC-
Confidence 99999999999999999999877543221000 000000011122223333333333456789999999999999984
Q ss_pred ccCCCCcCcHHH
Q 012411 372 LNSSVSELNFKT 383 (464)
Q Consensus 372 ~~~~~~~~~~~~ 383 (464)
..++.......
T Consensus 198 -~~p~~~~~~~~ 208 (265)
T cd05579 198 -IPPFHGETPEE 208 (265)
T ss_pred -CCCCCCCCHHH
Confidence 34444444333
No 165
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.87 E-value=1.7e-22 Score=219.00 Aligned_cols=244 Identities=18% Similarity=0.151 Sum_probs=143.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|+.||||+++......- ...+. |.+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e------------------------------~~~~r------flr 51 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENP------------------------------LLKKR------FLR 51 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCH------------------------------HHHHH------HHH
Confidence 679999999999999988899999999875422110 00011 222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh----------cCCCHH--HHHHHHHHHHH
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES----------QGLKVL--DLVNTGIQCSL 281 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~----------~~~~~~--~~~~~~i~~~l 281 (464)
|++.+.++. ++++.-..-+.......+++|||++|++|.++..... .+.+.. ..+..++..++
T Consensus 52 Ei~ILs~L~-----HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL 126 (932)
T PRK13184 52 EAKIAADLI-----HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATI 126 (932)
T ss_pred HHHHHHhCC-----CcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHH
Confidence 222222221 1221111111122356789999999999988654211 011111 22446778899
Q ss_pred HHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHH-H---------HHHHHHhcCHHHHHHHHHHcC
Q 012411 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAII-G---------HVVHMVNRDYEAMARDYYALD 349 (464)
Q Consensus 282 ~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~-~---------~~~~~~~~~~~~~~~~~~~~g 349 (464)
.++|+.|++|||+||+||+++.+|+++|+|||++........ .... . +......+++..++++....+
T Consensus 127 ~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~ 206 (932)
T PRK13184 127 EYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV 206 (932)
T ss_pred HHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC
Confidence 999999999999999999999999999999999987622110 0000 0 000011234444555554444
Q ss_pred CCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHH--HHHHH-hhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 350 FLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDG--LGAVL-YQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 350 ~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~-~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
..+.++|+||+|+.+++++++. .|+...+...+... +.... ......+|+.+..++..+ ...||+-|+
T Consensus 207 ~~S~kSDIWSLGVILyELLTG~--~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rc-------L~~DP~kR~ 277 (932)
T PRK13184 207 PASESTDIYALGVILYQMLTLS--FPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKA-------LAVDPAERY 277 (932)
T ss_pred CCCcHhHHHHHHHHHHHHHHCC--CCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHH-------ccCChhhCc
Confidence 5678899999999999999853 44443322222111 00000 001124666666665554 567777664
Q ss_pred H
Q 012411 427 L 427 (464)
Q Consensus 427 ~ 427 (464)
.
T Consensus 278 s 278 (932)
T PRK13184 278 S 278 (932)
T ss_pred C
Confidence 3
No 166
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.87 E-value=4e-22 Score=191.39 Aligned_cols=203 Identities=14% Similarity=0.109 Sum_probs=123.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||+||+|... +|+.+|||.+.......... ......+.+
T Consensus 6 ~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~---------------------------~~~~~~~~~------ 51 (265)
T cd06631 6 EVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAA---------------------------EKEYEKLQE------ 51 (265)
T ss_pred ceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhH---------------------------HHHHHHHHH------
Confidence 67999999999999886 89999999886432111000 000011122
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|+..+.++. ++++.-..-+.......+++|||++|++|.+...... ...+....+..++..++.++|+.|++|+
T Consensus 52 e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 126 (265)
T cd06631 52 EVDLLKSLK-----HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHR 126 (265)
T ss_pred HHHHHHhcC-----CCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 222222221 1222211112222356789999999999988754321 1223333455778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
|++|+||++++++.++|+|||++..+...... ..... .....+....++++.......+.+.|+|++|+.+++++++.
T Consensus 127 dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~ 205 (265)
T cd06631 127 DIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNM-LKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205 (265)
T ss_pred CcCHHhEEECCCCeEEeccchhhHhhhhcccccccccc-ccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999999988764321000 00000 00011222333344443344577899999999999999843
Q ss_pred ccCCCCc
Q 012411 372 LNSSVSE 378 (464)
Q Consensus 372 ~~~~~~~ 378 (464)
.|+..
T Consensus 206 --~p~~~ 210 (265)
T cd06631 206 --PPLAS 210 (265)
T ss_pred --Ccccc
Confidence 44443
No 167
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.87 E-value=2.2e-22 Score=193.81 Aligned_cols=202 Identities=18% Similarity=0.210 Sum_probs=125.6
Q ss_pred HHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChH--HHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHH
Q 012411 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE--EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (464)
Q Consensus 124 ~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~--~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (464)
++..|+.. +.||+|++|+||+|....+++.||+|+...... ..+..++.+++.+. .|+|++.+.+.+
T Consensus 4 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~---------~h~~i~~~~~~~ 72 (272)
T cd06637 4 PAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS---------HHRNIATYYGAF 72 (272)
T ss_pred hhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc---------CCCCeeeEeeEE
Confidence 45555554 679999999999999988899999999853311 11111111111110 133332222211
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCC--HHHHHHHHHH
Q 012411 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLK--VLDLVNTGIQ 278 (464)
Q Consensus 202 ~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~--~~~~~~~~i~ 278 (464)
... .........+++|||+.|++|.+...... .... ....+..++.
T Consensus 73 ~~~-------------------------------~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~ 121 (272)
T cd06637 73 IKK-------------------------------NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 121 (272)
T ss_pred eec-------------------------------CCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHH
Confidence 000 00001234689999999999988754322 1223 2334556788
Q ss_pred HHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 012411 279 CSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (464)
Q Consensus 279 ~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (464)
.++.|+|+.|++|+|+||+||++++++.++|+|||++..+..... ....++ ..+..||.+...-...+..+.++|
T Consensus 122 ~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~---~~y~aPE~~~~~~~~~~~~~~~~D 198 (272)
T cd06637 122 RGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGT---PYWMAPEVIACDENPDATYDFKSD 198 (272)
T ss_pred HHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCccccc---ccccCHhHhccccCcCCCCCchhh
Confidence 899999999999999999999999999999999999886643211 111222 223334433211000223466899
Q ss_pred cchHHHHHHHHHHH
Q 012411 357 VTPIVPALRNFFDD 370 (464)
Q Consensus 357 ~~sl~~~l~~~~~~ 370 (464)
+|++|+.+++++++
T Consensus 199 v~slGv~l~el~~g 212 (272)
T cd06637 199 LWSLGITAIEMAEG 212 (272)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999984
No 168
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.87 E-value=2.4e-22 Score=204.71 Aligned_cols=260 Identities=16% Similarity=0.157 Sum_probs=151.4
Q ss_pred cccccceecEEEEEEEc--cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLK--YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.||.|++|.||+|... .++..||||....+. ....++.+++. +.|++++.+++.+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~~~~E~~il~~----------l~h~~iv~~~~~~---------- 155 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--TPGREIDILKT----------ISHRAIINLIHAY---------- 155 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc--cHHHHHHHHHh----------cCCCCccceeeeE----------
Confidence 78999999999999864 246789999876441 11222222222 2355555443321
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (464)
......+++||++.+ +|.+... ....+. ....+..++..++.|||+.|+
T Consensus 156 ---------------------------~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~gi 206 (392)
T PHA03207 156 ---------------------------RWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGI 206 (392)
T ss_pred ---------------------------eeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 112456799999975 5555432 122233 334556778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+||||||+|||++.++.++|+|||++..+......... ....+.+.++++++...+..+.++|+|++|+.+++++.
T Consensus 207 vHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~ 282 (392)
T PHA03207 207 IHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQC----YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSV 282 (392)
T ss_pred cccCCCHHHEEEcCCCCEEEccCccccccCcccccccc----cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHH
Confidence 99999999999999999999999998766433111000 01112233344445545556788999999999999998
Q ss_pred HhccCCCCcCc---HHHHHHHHHHHHhhCCCCCChHH-HHHHHHHHHHHHhhcccCCCC---------ChHHhhhHHHHH
Q 012411 370 DALNSSVSELN---FKTIVDGLGAVLYQYPFNVPAYY-ALILRSLTVLEGLALYADPNF---------KVLAASYPYFAK 436 (464)
Q Consensus 370 ~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~p~~~-~~l~r~l~~leg~~~~ldP~~---------~~~~~~~p~~~~ 436 (464)
+. .|+.... ....+..+...+...+..+|... ..+.+.+... .....|.+ .....++.++.+
T Consensus 283 g~--~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 357 (392)
T PHA03207 283 KN--VTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQY---AIVLRPPYTIPPVIRKYGMHMDVEYLIAK 357 (392)
T ss_pred CC--CCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhh---cccccCCccccchhhccCcchhHHHHHHH
Confidence 43 3332221 22233334444444444444321 1112222111 11112211 112234455555
Q ss_pred HhcCCCCHHHHHHHHHHhc
Q 012411 437 RLLTDPNPYLRDALVELLF 455 (464)
Q Consensus 437 ~l~~~~~p~~r~~~~~~l~ 455 (464)
++ ..+|..||++.++|.
T Consensus 358 ml--~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 358 ML--TFDQEFRPSAQDILS 374 (392)
T ss_pred Hh--ccChhhCCCHHHHhh
Confidence 55 456778888888775
No 169
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.86 E-value=4.1e-22 Score=196.23 Aligned_cols=187 Identities=20% Similarity=0.228 Sum_probs=122.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.+..+|..||+|.......... ...+.+|++
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~--------------------------------~~~~~~E~~--- 51 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAI--------------------------------RNQIIRELK--- 51 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHH--------------------------------HHHHHHHHH---
Confidence 679999999999999988899999999864422110 011111211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH-CCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE-YGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~gi~H 291 (464)
.+.++ .+..-+.+...+ ......+++|||++|++|.++..... ........+..++..++.|+|+ .|++|
T Consensus 52 ---~l~~l----~h~~iv~~~~~~-~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H 123 (308)
T cd06615 52 ---VLHEC----NSPYIVGFYGAF-YSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMH 123 (308)
T ss_pred ---HHHhC----CCCCCCeEEEEE-eeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEE
Confidence 11111 111111111112 12356789999999999988754321 1223344566778889999997 69999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.++.++|+|||++..+.........+ .+..++++.+.....+.+.|+|++|+.+++++++.
T Consensus 124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~--------~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 195 (308)
T cd06615 124 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG--------TRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195 (308)
T ss_pred CCCChHHEEEecCCcEEEccCCCcccccccccccCCC--------CcCccChhHhcCCCCCccchHHHHHHHHHHHHhCC
Confidence 9999999999999999999999987664332211111 12223333333344577899999999999999854
No 170
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.86 E-value=2.7e-21 Score=183.84 Aligned_cols=187 Identities=18% Similarity=0.213 Sum_probs=121.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|... ++..||+|+.+........ .++..
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~--------------------------------------~~~~~ 41 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELK--------------------------------------IKFLS 41 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHH--------------------------------------HHHHH
Confidence 36999999999999976 8899999998755322110 01222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ +++++.-+.-+....+..++||||++|++|.+.........+... .+..++..++.++|+.|++|
T Consensus 42 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H 116 (250)
T cd05085 42 EARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIH 116 (250)
T ss_pred HHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 22222222 223322222222334567999999999999887543332334333 33456677999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+||+||+++.++.++|+|||++........... + .....+..++++....+..+.+.|+|++|+.++++++
T Consensus 117 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~-~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~ 189 (250)
T cd05085 117 RDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS-G----LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFS 189 (250)
T ss_pred cccChheEEEcCCCeEEECCCccceeccccccccC-C----CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhc
Confidence 99999999999999999999999876443211000 0 0000122334444445556778999999999999986
No 171
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.86 E-value=5.7e-22 Score=193.86 Aligned_cols=143 Identities=17% Similarity=0.220 Sum_probs=98.0
Q ss_pred CCCceEEEeeecCcccCcHHHHHhcC----------CC--HHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEE
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQG----------LK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLA 308 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~----------~~--~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~ 308 (464)
....+++|||++|++|.++....... .+ ....+..++..++.++|+.|++|+|+||+||+++.++.++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~ 170 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIK 170 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEE
Confidence 45678999999999998764432111 11 2334556778899999999999999999999999999999
Q ss_pred EEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHH
Q 012411 309 FLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDG 387 (464)
Q Consensus 309 l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~ 387 (464)
|+|||++..+.........+.. ...+..++++....+..+.++|+||+|+.++++++.....|+...+..+.+..
T Consensus 171 l~dfg~~~~~~~~~~~~~~~~~----~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 245 (296)
T cd05095 171 IADFGMSRNLYSGDYYRIQGRA----VLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIEN 245 (296)
T ss_pred eccCcccccccCCcceeccCcC----cCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 9999998865432111111110 00112223333344566889999999999999998666667766655554433
No 172
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.86 E-value=3.5e-22 Score=195.25 Aligned_cols=144 Identities=17% Similarity=0.195 Sum_probs=98.2
Q ss_pred CCCceEEEeeecCcccCcHHHHHhc-----------CCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcE
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQ-----------GLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKL 307 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~-----------~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i 307 (464)
....++||||++|++|.+....... ..+.. ..+..++..++.|+|+.|++|+|+||+||++++++.+
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~ 168 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTI 168 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcE
Confidence 4567899999999999886532210 11222 2345677789999999999999999999999999999
Q ss_pred EEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHH
Q 012411 308 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDG 387 (464)
Q Consensus 308 ~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~ 387 (464)
+|+|||++..+.........+ ........++++....+..+.++|+||+|+.++++++.....++...+...++..
T Consensus 169 kl~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~ 244 (295)
T cd05097 169 KIADFGMSRNLYSGDYYRIQG----RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN 244 (295)
T ss_pred EecccccccccccCcceeccC----cCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence 999999987653321110111 0111122334444444556889999999999999998655666666655555444
Q ss_pred H
Q 012411 388 L 388 (464)
Q Consensus 388 l 388 (464)
+
T Consensus 245 ~ 245 (295)
T cd05097 245 T 245 (295)
T ss_pred H
Confidence 3
No 173
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.86 E-value=8.9e-22 Score=187.72 Aligned_cols=198 Identities=18% Similarity=0.152 Sum_probs=123.2
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.||+|++|+||+|....+|+.|++|+........... +..+.+...+..+....|+++.++.+
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~------------- 69 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQ--EAVKQLEQEIALLSKLQHPNIVQYLG------------- 69 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccch--HHHHHHHHHHHHHHhcCCCCchheee-------------
Confidence 478999999999999998789999999986432110000 00000111111111112333222221
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
+.......+++|||++|++|.++..... ..+.. ..+..++..++.++|+.|++
T Consensus 70 ------------------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~ 124 (258)
T cd06632 70 ------------------------TEREEDNLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRNTV 124 (258)
T ss_pred ------------------------eEecCCeEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 1112245689999999999988744221 23332 33456677899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCCCCcchHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF-LSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~D~~sl~~~l~~~~~ 369 (464)
|+|++|+||+++.++.++|+|||++......... ....+.+..++++....+. .+.++|+|++|+.++++++
T Consensus 125 H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~-------~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~ 197 (258)
T cd06632 125 HRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA-------KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMAT 197 (258)
T ss_pred cCCCCHHHEEECCCCCEEEccCccceeccccccc-------cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHh
Confidence 9999999999999999999999998775433210 0011122223333332232 5678999999999999998
Q ss_pred HhccCCCCcC
Q 012411 370 DALNSSVSEL 379 (464)
Q Consensus 370 ~~~~~~~~~~ 379 (464)
+ ..|+...
T Consensus 198 g--~~pf~~~ 205 (258)
T cd06632 198 G--KPPWSQL 205 (258)
T ss_pred C--CCCcccC
Confidence 3 3454443
No 174
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.86 E-value=1e-21 Score=192.24 Aligned_cols=195 Identities=18% Similarity=0.188 Sum_probs=125.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+..+|+.|+||........... ...+.+ ..+....|+|++.+++
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~---~~~~e~----~~l~~l~h~~iv~~~~-------------- 83 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKE---LIINEI----LVMKELKNPNIVNFLD-------------- 83 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHH---HHHHHH----HHHHhcCCCceeeeee--------------
Confidence 6799999999999999889999999987532111100 000000 0011112333322222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
+.......++||||++|++|.+.........+....+..++..++.++|+.|++|+|
T Consensus 84 -----------------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~d 140 (296)
T cd06655 84 -----------------------SFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRD 140 (296)
T ss_pred -----------------------eEecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 111234578999999999998875433223333344556777899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~ 373 (464)
+||.||+++.+|.++|+|||++..+....... ....+.+.+++++....+..+.++|+|++|+.+++++++ .
T Consensus 141 L~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg--~ 212 (296)
T cd06655 141 IKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG--E 212 (296)
T ss_pred CCHHHEEECCCCCEEEccCccchhcccccccC------CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhC--C
Confidence 99999999999999999999988765432110 001112222333333344457789999999999999984 3
Q ss_pred CCCCcCc
Q 012411 374 SSVSELN 380 (464)
Q Consensus 374 ~~~~~~~ 380 (464)
.|+...+
T Consensus 213 ~pf~~~~ 219 (296)
T cd06655 213 PPYLNEN 219 (296)
T ss_pred CCCCCCC
Confidence 4554433
No 175
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.86 E-value=3.2e-21 Score=186.63 Aligned_cols=201 Identities=16% Similarity=0.160 Sum_probs=128.3
Q ss_pred HhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHH
Q 012411 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (464)
Q Consensus 125 ~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (464)
++.|..+ +.||+|++|+||+|.+..+|+.||||+........ .
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~---~-------------------------------- 45 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED---E-------------------------------- 45 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH---H--------------------------------
Confidence 4455555 67999999999999998789999999876331110 0
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHH
Q 012411 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLR 282 (464)
Q Consensus 205 ~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~ 282 (464)
..++..|...+.++ ++++ +++++. ......++||||++|++|.+..............+..++..++.
T Consensus 46 ---~~~~~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~ 115 (277)
T cd06640 46 ---IEDIQQEITVLSQC-----DSPY--VTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLD 115 (277)
T ss_pred ---HHHHHHHHHHHHhC-----CCCC--EeeEEEEEEECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 00112222222111 1222 222222 22456799999999999988644322222222334466778999
Q ss_pred HHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 012411 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~ 362 (464)
++|+.|++|+|++|+||+++.++.++++|||++..+....... ....+....++++....+..+.+.|+|++|+
T Consensus 116 ~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~ 189 (277)
T cd06640 116 YLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIQQSAYDSKADIWSLGI 189 (277)
T ss_pred HHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc------ccccCcccccCHhHhccCCCccHHHHHHHHH
Confidence 9999999999999999999999999999999997764432110 0001112223333333445577899999999
Q ss_pred HHHHHHHHhccCCCCcCc
Q 012411 363 ALRNFFDDALNSSVSELN 380 (464)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~ 380 (464)
.+++++++ ..|+...+
T Consensus 190 il~el~tg--~~p~~~~~ 205 (277)
T cd06640 190 TAIELAKG--EPPNSDMH 205 (277)
T ss_pred HHHHHHHC--CCCCCCcC
Confidence 99999984 34554443
No 176
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.86 E-value=7e-22 Score=194.15 Aligned_cols=241 Identities=19% Similarity=0.158 Sum_probs=142.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+++.||||...+..... ... ... +..
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~-----------------------------~~~------~~~ 50 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQ-----------------------------IQQ------VFV 50 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHH-----------------------------HHH------HHH
Confidence 67999999999999999889999999876441110 000 001 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCC--CCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (464)
|...+.. . +++ .+++++..++ ...++||||++|++|.+..... .... ....+..++..++.|+|+.|+
T Consensus 51 e~~~l~~----~-~~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i 122 (305)
T cd05609 51 ERDILTF----A-ENP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGI 122 (305)
T ss_pred HHHHHHh----C-CCC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 2211111 1 122 2344444433 3458999999999998875332 1222 223344567789999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH---------HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI---------IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl 360 (464)
+|+|+||+||+++.+|.++|+|||+++.........+ .........+....++++...-+..+.++|+|++
T Consensus 123 ~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 202 (305)
T cd05609 123 VHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAM 202 (305)
T ss_pred cccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHH
Confidence 9999999999999999999999998763110000000 0000000011122233333333445788999999
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCC---CCChHHHHHHHHHHHHHHhhcccCCCCChH
Q 012411 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPF---NVPAYYALILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~p~~~~~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
|+.+++++++. .|+.+.+..++...........+. .+|+.+..+++.+ ...||+-|+.
T Consensus 203 G~vl~el~~g~--~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~-------l~~~P~~R~~ 263 (305)
T cd05609 203 GIILYEFLVGC--VPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRL-------LRQNPLERLG 263 (305)
T ss_pred HHHHHHHHhCC--CCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHH-------hccChhhccC
Confidence 99999999843 444444444444333222111222 3566666666666 5567766654
No 177
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.86 E-value=5.1e-21 Score=185.23 Aligned_cols=252 Identities=15% Similarity=0.118 Sum_probs=148.9
Q ss_pred HHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHH
Q 012411 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (464)
Q Consensus 124 ~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (464)
.+++|..+ +.||+|+||.||+|.+..+|+.||||+......... ..
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~--------------------------------~~ 47 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE--------------------------------IE 47 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHH--------------------------------HH
Confidence 35566655 679999999999999887899999998753311100 00
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHH
Q 012411 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQ 283 (464)
Q Consensus 204 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (464)
++.+|...+.++ +++++.-..-+.......++||||++|++|.++.............+..++..++.+
T Consensus 48 ------~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~ 116 (277)
T cd06641 48 ------DIQQEITVLSQC-----DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDY 116 (277)
T ss_pred ------HHHHHHHHHHhc-----CCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 112222222222 122222111122234567999999999999876432222222233445667789999
Q ss_pred HHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
+|+.|++|+|++|+||+++.+|.++++|||++..+....... .. ..+....++++....+..+.+.|+|++|+.
T Consensus 117 lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~--~~----~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~ 190 (277)
T cd06641 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NT----FVGTPFWMAPEVIKQSAYDSKADIWSLGIT 190 (277)
T ss_pred HccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhh--cc----ccCCccccChhhhccCCCCchhhHHHHHHH
Confidence 999999999999999999999999999999987765432110 00 011112223333333445678999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHH
Q 012411 364 LRNFFDDALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFA 435 (464)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~ 435 (464)
+++++.+ ..|+...+.......+.... ...+...|+.+..++..+ ...+|+.++... .+||+.
T Consensus 191 l~~l~~g--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------l~~~p~~Rp~~~~~l~~~~~~ 257 (277)
T cd06641 191 AIELAKG--EPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEAC-------LNKEPSFRPTAKELLKHKFIV 257 (277)
T ss_pred HHHHHcC--CCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHH-------ccCChhhCcCHHHHHhCHHHh
Confidence 9999974 34544443332232221110 011223455555555444 566777665432 455554
No 178
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.86 E-value=2.5e-21 Score=184.91 Aligned_cols=207 Identities=15% Similarity=0.165 Sum_probs=127.2
Q ss_pred cccccceecEEEEEEEcc-CCc--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLKY-SGQ--IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-~g~--~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|++|.||+|.+.. +|+ .||||+.+..... ...+.+......+....|++++.++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~------------ 62 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------DIMDDFLKEAAIMHSLDHENLIRLY------------ 62 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------HHHHHHHHHHHHHhhcCCCCcccee------------
Confidence 368999999999999864 333 6999998865332 1111111111111122233333222
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~ 287 (464)
..+.. ...+++|||++|++|.+...... ...+.. ..+..++..++.++|+.
T Consensus 63 ------------------------~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 116 (257)
T cd05040 63 ------------------------GVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK 116 (257)
T ss_pred ------------------------EEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 12222 56689999999999988754322 123333 33446777899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|++|+|+||+||+++.++.++|+|||++..+........... ........++++.......+.+.|+|++|+.++++
T Consensus 117 ~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el 193 (257)
T cd05040 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE---HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEM 193 (257)
T ss_pred CccccccCcccEEEecCCEEEeccccccccccccccceeccc---CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHH
Confidence 999999999999999999999999999987644211100000 00111222333333334457789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHH
Q 012411 368 FDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l 388 (464)
++ +...|+...+..++...+
T Consensus 194 ~t-~g~~p~~~~~~~~~~~~~ 213 (257)
T cd05040 194 FT-YGEEPWAGLSGSQILKKI 213 (257)
T ss_pred Hh-CCCCCCCCCCHHHHHHHH
Confidence 86 233455444444444333
No 179
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.3e-21 Score=194.36 Aligned_cols=241 Identities=18% Similarity=0.212 Sum_probs=148.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+.+.||++... +.+.+|+|.+.-.. .|-. .... |.+
T Consensus 367 k~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~-----~D~q--------------------------tl~g------y~n 408 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNS-DKQIYALKKVVLLE-----ADNQ--------------------------TLDG------YRN 408 (677)
T ss_pred HhhcCCCcceeeeeecC-CCcchhhhHHHHhh-----cCHH--------------------------HHHH------HHH
Confidence 67999999999999976 66778887653211 1111 1112 223
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeecc--CCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi 289 (464)
|..-+.++. ++. .|-+.|+. ..+..|+||||-+ .+|..+......... ..+.+..+++.++.++|.+||
T Consensus 409 EI~lL~KLk----g~~--~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gI 481 (677)
T KOG0596|consen 409 EIALLNKLK----GHD--KIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGI 481 (677)
T ss_pred HHHHHHHhc----CCc--eEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhce
Confidence 333333333 222 23333332 2456789999864 477777544332222 456777889999999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHH----HHHHHHHHHHHHhcCHHHHHHHHHH-cC-----CCCCCCCcch
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEA----RFAIIGHVVHMVNRDYEAMARDYYA-LD-----FLSPDVDVTP 359 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~g-----~~~~~~D~~s 359 (464)
||.||||.|+|+ -.|.+||||||++..+.++. +...+||+.+| .||.+...-.. -+ -++.+.|+||
T Consensus 482 VHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYM---sPEAl~~~~s~~~~~~~k~Ki~r~SDvWS 557 (677)
T KOG0596|consen 482 VHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYM---SPEALTDMSSSRENGKSKIKISRKSDVWS 557 (677)
T ss_pred eecCCCcccEEE-EeeeEEeeeechhcccCccccceeeccccCccccc---CHHHHhhccccccCCCcceeecCccchhh
Confidence 999999999998 67999999999999987764 34456665555 46665432211 11 1577899999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHh-hCCCC---CC-hH-HHHHHHHHHHHHHhhcccCCCCChHHh---h
Q 012411 360 IVPALRNFFDDALNSSVSELNFKTIVDGLGAVLY-QYPFN---VP-AY-YALILRSLTVLEGLALYADPNFKVLAA---S 430 (464)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~---~p-~~-~~~l~r~l~~leg~~~~ldP~~~~~~~---~ 430 (464)
+||++|.|+- ...|+.++ ......+..+.. .+.+. +| .+ +..++|. |+..||+-|++-. .
T Consensus 558 LGCILYqMvY--gktPf~~~--~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~-------CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 558 LGCILYQMVY--GKTPFGQI--INQIAKLHAITDPNHEIEFPDIPENDELIDVMKC-------CLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhhHHHHHHh--cCCchHHH--HHHHHHHHhhcCCCccccccCCCCchHHHHHHHH-------HHhcCcccCCCcHHHhc
Confidence 9999999986 34555433 222233333222 12122 22 23 4444444 4777887655432 5
Q ss_pred hHHH
Q 012411 431 YPYF 434 (464)
Q Consensus 431 ~p~~ 434 (464)
+||+
T Consensus 627 hpFl 630 (677)
T KOG0596|consen 627 HPFL 630 (677)
T ss_pred Cccc
Confidence 6665
No 180
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.86 E-value=1.5e-21 Score=186.57 Aligned_cols=198 Identities=13% Similarity=0.138 Sum_probs=125.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.++ ++..+|||+..++.... . ++..
T Consensus 10 ~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~----------------------------------~------~~~~ 48 (256)
T cd05059 10 KELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSE----------------------------------D------DFIE 48 (256)
T ss_pred hhhccCCCceEEEeEec-CCccEEEEEeccCCCCH----------------------------------H------HHHH
Confidence 67999999999999987 77789999986442110 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ +++++.-..-+.......+++|||++|++|.+.........+.. ..+..++..++.++|+.|++|
T Consensus 49 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 123 (256)
T cd05059 49 EAKVMMKL-----SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIH 123 (256)
T ss_pred HHHHHHhC-----CCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 11111111 12332221112233456789999999999988754332233333 334567778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.+|.++|+|||++............+.. .....++++....+..+.+.|+|++|+.++++++.
T Consensus 124 ~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-----~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~- 197 (256)
T cd05059 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTK-----FPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSE- 197 (256)
T ss_pred ccccHhhEEECCCCcEEECCcccceecccccccccCCCC-----CCccccCHHHhccCCCCchhhHHHHHHHHHHHhcc-
Confidence 999999999999999999999998765432111100100 01122334444445567789999999999999862
Q ss_pred ccCCCCcCcHHH
Q 012411 372 LNSSVSELNFKT 383 (464)
Q Consensus 372 ~~~~~~~~~~~~ 383 (464)
...|+...+..+
T Consensus 198 g~~p~~~~~~~~ 209 (256)
T cd05059 198 GKMPYERFSNSE 209 (256)
T ss_pred CCCCCCCCCHHH
Confidence 234444444333
No 181
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.86 E-value=1e-21 Score=192.21 Aligned_cols=188 Identities=18% Similarity=0.144 Sum_probs=122.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.|++|.......... +. +..
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~---------------------------------~~------~~~ 66 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---------------------------------EL------IIN 66 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchH---------------------------------HH------HHH
Confidence 679999999999999887899999998864321110 00 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|...+..+ +++++.-..-+.......++||||++|++|.++.............+..++..++.++|..|++|+|
T Consensus 67 e~~~l~~~-----~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~d 141 (296)
T cd06654 67 EILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141 (296)
T ss_pred HHHHHHhC-----CCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 11111111 1222221111122235679999999999998875432222223334456778899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+||+||+++.++.++|+|||++.......... ....+.+..++++....+..++++|+|++|+.+++++++.
T Consensus 142 Lkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~ 213 (296)
T cd06654 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213 (296)
T ss_pred CCHHHEEEcCCCCEEECccccchhcccccccc------CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC
Confidence 99999999999999999999987654332110 0001222333344444455678999999999999999843
No 182
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.86 E-value=5.9e-22 Score=189.55 Aligned_cols=142 Identities=15% Similarity=0.096 Sum_probs=94.6
Q ss_pred CCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCH
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~ 320 (464)
...+++|||+++++|.+...... ...+....+..++..++.++|+.|++|+|+||.||++++++.++|+|||++..+..
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~ 147 (257)
T cd05116 68 ESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCC
Confidence 34589999999999987754321 12233334456788899999999999999999999999999999999999887643
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHH
Q 012411 321 EARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDG 387 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~ 387 (464)
.......... ....+..++++....+..+.+.|+||+|+.++++++ ....|+...+..++...
T Consensus 148 ~~~~~~~~~~---~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t-~g~~p~~~~~~~~~~~~ 210 (257)
T cd05116 148 DENYYKAKTH---GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFS-YGQKPYKGMKGNEVTQM 210 (257)
T ss_pred CCCeeeecCC---CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHH
Confidence 3211000000 000122333344444556778999999999999996 12345555554444433
No 183
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.86 E-value=1e-21 Score=193.87 Aligned_cols=204 Identities=16% Similarity=0.133 Sum_probs=125.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.||||...+..... ....+.+....+.+....|++++.+++.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~------------- 69 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK----RNKVKRVLTEQEILATLDHPFLPTLYAS------------- 69 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch----HHHHHHHHHHHHHHHhCCCCCchhheee-------------
Confidence 67999999999999998789999999987542111 0000111111111111123333322221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
.......+++|||+.|++|.+...... ..++.. ..+..++..++.|+|..|++
T Consensus 70 ------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 125 (316)
T cd05574 70 ------------------------FQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125 (316)
T ss_pred ------------------------eecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 122345689999999999988754321 223333 33456788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHH-----------------------HHHHHHhcCHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-----------------------HVVHMVNRDYEAMARDYYA 347 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~ 347 (464)
|+|+||.||+++.+|.++|+|||++............. .......+....++++...
T Consensus 126 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 205 (316)
T cd05574 126 YRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS 205 (316)
T ss_pred ccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc
Confidence 99999999999999999999999987653321100000 0000001122233344443
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc
Q 012411 348 LDFLSPDVDVTPIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 348 ~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
-+..+.++|+|++|+.+++++.+ ..|+...+
T Consensus 206 ~~~~~~~~Di~slG~ll~~l~~g--~~pf~~~~ 236 (316)
T cd05574 206 GDGHGSAVDWWTLGILLYEMLYG--TTPFKGSN 236 (316)
T ss_pred CCCCCchHHHHHHHHHHHHHhhC--CCCCCCCc
Confidence 44457789999999999999984 34554444
No 184
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.86 E-value=1.4e-22 Score=193.54 Aligned_cols=193 Identities=21% Similarity=0.239 Sum_probs=127.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.||+|+........... ... ..
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~-------------------------------~~~------~~ 47 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEER-------------------------------EEN------IR 47 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHH-------------------------------HHH------HH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEecccccccccc-------------------------------chh------hh
Confidence 67999999999999999889999999997653322110 000 01
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++. ++.+.-..-+.......+++|||++|++|.++.. .....+ ....+..++..++.+||+.|++|
T Consensus 48 e~~~~~~l~-----~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H 121 (260)
T PF00069_consen 48 EIKILRRLR-----HPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVH 121 (260)
T ss_dssp HHHHHHHHT-----BTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred hhhcccccc-----cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 222222221 2332211222223566789999999999988755 223333 33455677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcchHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~D~~sl~~~l~~~~ 368 (464)
+|+||+||+++.++.++|+|||.+...... ......+ ...+..|| ... ....+.+.|+|++|+.+++++
T Consensus 122 ~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~---~~~y~aPE-----~~~~~~~~~~~~Di~slG~il~~l~ 193 (260)
T PF00069_consen 122 RDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVG---TPEYMAPE-----VLQQGKKYTRKSDIWSLGIILYELL 193 (260)
T ss_dssp SSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSS---SGGGSCHH-----HHTTTSSBSTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccc---cccccccc-----ccccccccccccccccccccccccc
Confidence 999999999999999999999998643111 0000011 11223344 333 455688899999999999999
Q ss_pred HHhccCCCCcC
Q 012411 369 DDALNSSVSEL 379 (464)
Q Consensus 369 ~~~~~~~~~~~ 379 (464)
++ ..++...
T Consensus 194 ~~--~~p~~~~ 202 (260)
T PF00069_consen 194 TG--KLPFEES 202 (260)
T ss_dssp HS--SSSSTTS
T ss_pred cc--ccccccc
Confidence 84 3444444
No 185
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.86 E-value=7.4e-22 Score=191.11 Aligned_cols=187 Identities=17% Similarity=0.200 Sum_probs=119.9
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||+|+||.||+|....+|+.||+|+.......... .+..+..|.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~~e~ 44 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRK------------------------------------GEQMALNEK 44 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhh------------------------------------hhHHHHHHH
Confidence 68999999999999888999999998643211100 001111222
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHH--HHHHHHHHHHHHHHHCCcccC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLD--LVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~--~~~~~i~~~l~~lh~~gi~H~ 292 (464)
..+.++. ++.+.-...+.......++||||++|++|.+...... ....... .+..++..++.++|..|++|+
T Consensus 45 ~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~ 119 (277)
T cd05577 45 KILEKVS-----SRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119 (277)
T ss_pred HHHHhCC-----CCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 2222221 2222221112223456789999999999987644322 1344433 344678889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|++|+||+++.++.++|+|||.+..+...... ... .+....++++....+..+.+.|+|++|+.+++++.+
T Consensus 120 di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~-----~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g 190 (277)
T cd05577 120 DLKPENVLLDDHGNVRISDLGLAVELKGGKKI--KGR-----AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAG 190 (277)
T ss_pred CCCHHHEEECCCCCEEEccCcchhhhccCCcc--ccc-----cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhC
Confidence 99999999999999999999988765432110 000 111122333333334456789999999999999974
No 186
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.86 E-value=9.7e-22 Score=191.86 Aligned_cols=144 Identities=18% Similarity=0.202 Sum_probs=98.5
Q ss_pred CCCceEEEeeecCcccCcHHHHHhc----------CCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEE
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQ----------GLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLA 308 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~----------~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~ 308 (464)
....+++|||++|++|.++...... ..+.. ..+..++..++.++|+.|++|+|+||+||+++.++.++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~ 170 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIK 170 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceE
Confidence 3567999999999999887543220 22333 33456777899999999999999999999999999999
Q ss_pred EEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHH
Q 012411 309 FLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 309 l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l 388 (464)
|+|||++..+.........+ .....+..++++....+..+.++|+|++|+.++++++.....|+...+...++..+
T Consensus 171 l~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~ 246 (296)
T cd05051 171 IADFGMSRNLYSSDYYRVQG----RAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENA 246 (296)
T ss_pred EccccceeecccCcceeecC----cCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHH
Confidence 99999987653321110000 11112233444444445668899999999999999975455566655554444443
No 187
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.86 E-value=2.3e-22 Score=201.82 Aligned_cols=206 Identities=17% Similarity=0.172 Sum_probs=129.5
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.++||+|+||.||+|.++ | +||||++.-. +++.. -.+. |.
T Consensus 397 ~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~--------------------------~pt~~-----qlqa------FK 436 (678)
T KOG0193|consen 397 GERIGSGSFGTVYRGRWH--G-DVAVKLLNVD--------------------------DPTPE-----QLQA------FK 436 (678)
T ss_pred cceeccccccceeecccc--c-ceEEEEEecC--------------------------CCCHH-----HHHH------HH
Confidence 478999999999999996 3 6999998633 11111 1111 22
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCC--CCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCC
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (464)
+|..+..+-++.. |. .+..++ -...||+.||+|-+|.......+..++.. ..+..|+..|+.|||.++
T Consensus 437 nEVa~lkkTRH~N-----Il---LFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~ 508 (678)
T KOG0193|consen 437 NEVAVLKKTRHEN-----IL---LFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN 508 (678)
T ss_pred HHHHHHhhcchhh-----he---eeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh
Confidence 3333333332210 00 011111 22369999999999998766555555544 345678888999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|||+|+|..||++.++++|||.|||++..-....... +-..-..+.+..||.+. .++..-+++..|+++||+.+||+
T Consensus 509 IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIR--mqd~nPfS~qSDVYaFGiV~YEL 586 (678)
T KOG0193|consen 509 IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIR--MQDDNPFSFQSDVYAFGIVWYEL 586 (678)
T ss_pred hhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHh--hcccCCCCcccchhhhhHHHHHH
Confidence 9999999999999999999999999986422111100 10011122333344433 12222357789999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHH
Q 012411 368 FDDALNSSVSELNFKTIVDGLGA 390 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~ 390 (464)
+++- .|++.-+-..+++.++.
T Consensus 587 ltg~--lPysi~~~dqIifmVGr 607 (678)
T KOG0193|consen 587 LTGE--LPYSIQNRDQIIFMVGR 607 (678)
T ss_pred HhCc--CCcCCCChhheEEEecc
Confidence 9954 45553334455555554
No 188
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.86 E-value=7.9e-22 Score=199.18 Aligned_cols=240 Identities=18% Similarity=0.209 Sum_probs=159.9
Q ss_pred CcccccceecEEEEEEEccCCc---E-EEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQ---I-VAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~---~-VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
.+.||+|.||.||+|+++..+. . ||||..+-..... -..-
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~------------------------------------~~~~ 205 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELT------------------------------------KEQI 205 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeeccccccc------------------------------------HHHH
Confidence 3789999999999999975432 3 8999876311000 0111
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHH--HHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDL--VNTGIQCSLRQLLE 286 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~--~~~~i~~~l~~lh~ 286 (464)
.+|++||+-+.++. +++|.--.-+.....+.+||||+|+||+|.++.......++..+. +..+...|++|||.
T Consensus 206 ~e~m~EArvMr~l~-----H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~ 280 (474)
T KOG0194|consen 206 KEFMKEARVMRQLN-----HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS 280 (474)
T ss_pred HHHHHHHHHHHhCC-----CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH
Confidence 23566676666542 233332222335568889999999999999986544433554443 44566779999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
++++||||-..|+|++.++.+||+|||+++.-+.. .....+ .-...+++++.+..|..++++|+|++|+.++
T Consensus 281 k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~-------klPirWLAPEtl~~~~~s~kTDV~sfGV~~~ 353 (474)
T KOG0194|consen 281 KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLK-------KLPIRWLAPETLNTGIFSFKTDVWSFGVLLW 353 (474)
T ss_pred CCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccc-------cCcceecChhhhccCccccccchhheeeeEE
Confidence 99999999999999999999999999998765421 111111 1124556677777888899999999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhh--CCCCCChHHHHHHHHHHHHHHhhcccCCCCChHH
Q 012411 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQ--YPFNVPAYYALILRSLTVLEGLALYADPNFKVLA 428 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~ 428 (464)
|+++.-.. |+.+....++...+..--+. .+...|+....++. -|-..||+.+..-
T Consensus 354 Eif~~g~~-Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~-------~c~~~~p~~R~tm 410 (474)
T KOG0194|consen 354 EIFENGAE-PYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMK-------QCWKKDPEDRPTM 410 (474)
T ss_pred eeeccCCC-CCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHH-------HhccCChhhccCH
Confidence 99985443 88888777766666332222 22334444433333 2466777655543
No 189
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.86 E-value=1.3e-22 Score=187.98 Aligned_cols=189 Identities=19% Similarity=0.194 Sum_probs=132.7
Q ss_pred cCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 131 ISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 131 ~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
++.+.||.|--|.|-.+..+.||+.+|+|+++-.-+.+-+.++ ++....|++++.+++.++...
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeL-----------Hw~~s~h~~iV~IidVyeNs~----- 128 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVEL-----------HWMASGHPHIVSIIDVYENSY----- 128 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhh-----------hhhhcCCCceEEeehhhhhhc-----
Confidence 4568899999999999999999999999998754333222222 122234888888888776541
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc-CCC--HHHHHHHHHHHHHHHHHHC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLK--VLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~--~~~~~~~~i~~~l~~lh~~ 287 (464)
.+ .....+|||.++||.|...+..+.. .+. ...-+..+|..++.|||+.
T Consensus 129 ---------------~~-------------rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~ 180 (400)
T KOG0604|consen 129 ---------------QG-------------RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM 180 (400)
T ss_pred ---------------cC-------------ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1234699999999999876543322 233 3445678899999999999
Q ss_pred CcccCCCCCcceEEcc---CCcEEEEecCCCCcCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 288 GYFHADPHPGNLLATP---EGKLAFLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~---~g~i~l~DFGl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
+|.|||+||+|+|.+. |..+||+|||+++.-... .-.+-|-+ |.+++++.....-.+...|+||+|..
T Consensus 181 nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~T--------PyYvaPevlg~eKydkscdmwSlgVi 252 (400)
T KOG0604|consen 181 NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFT--------PYYVAPEVLGPEKYDKSCDMWSLGVI 252 (400)
T ss_pred chhhccCChhheeeecCCCCcceEecccccccccCCCccccCCccc--------ccccCHHHhCchhcCCCCCccchhHH
Confidence 9999999999999974 446999999999986532 11112222 23333333322234778899999999
Q ss_pred HHHHHHHh
Q 012411 364 LRNFFDDA 371 (464)
Q Consensus 364 l~~~~~~~ 371 (464)
||-++.+|
T Consensus 253 mYIlLCGy 260 (400)
T KOG0604|consen 253 MYILLCGY 260 (400)
T ss_pred HHHhhcCC
Confidence 99999865
No 190
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.86 E-value=1.9e-21 Score=186.30 Aligned_cols=187 Identities=15% Similarity=0.098 Sum_probs=119.8
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||.|++|.||+|++..+|+.||+|+..+......... +.+......+....|+|+..+++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~---------------- 60 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQ----EHIFSEKEILEECNHPFIVKLYR---------------- 60 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHH----HHHHHHHHHHHhCCCCCEeeeee----------------
Confidence 6899999999999987899999999864321100000 00000000011111222222221
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccCCC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl 294 (464)
+....+..+++|||++|++|.+...... ........+..++..++.++|+.|++|+|+
T Consensus 61 ---------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl 119 (262)
T cd05572 61 ---------------------TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDL 119 (262)
T ss_pred ---------------------eEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCC
Confidence 1122356789999999999988743321 122233344567888999999999999999
Q ss_pred CCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 295 HPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 295 kp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+|.||+++.++.++|+|||.+..+....... ...+.+..++++.......+.+.|+|++|+.+++++.+
T Consensus 120 ~~~nilv~~~~~~~l~df~~~~~~~~~~~~~-------~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g 188 (262)
T cd05572 120 KPENLLLDSNGYVKLVDFGFAKKLKSGQKTW-------TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTG 188 (262)
T ss_pred CHHHEEEcCCCCEEEeeCCcccccCcccccc-------cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhC
Confidence 9999999999999999999998875542110 01122223333333333457789999999999999974
No 191
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.86 E-value=5.5e-22 Score=192.35 Aligned_cols=205 Identities=14% Similarity=0.175 Sum_probs=126.4
Q ss_pred cccccceecEEEEEEEccCC-----cEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSG-----QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g-----~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||.|++|.||+|.....+ ..||+|..+....... ...
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~--------------------------------~~~---- 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKV--------------------------------QQE---- 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHH--------------------------------HHH----
Confidence 67999999999999986444 6799998864422110 011
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---------------cCCCHH--H
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLKVL--D 271 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~~--~ 271 (464)
|.+|...+.++. ++++.-..-+.......+++|||++|++|.+...... ...+.. .
T Consensus 55 --~~~ei~~l~~l~-----h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 127 (283)
T cd05048 55 --FRQEAELMSDLQ-----HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFL 127 (283)
T ss_pred --HHHHHHHHHhcC-----CcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHH
Confidence 112222222211 1221111111222356789999999999987654321 112222 2
Q ss_pred HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 272 ~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
.+..++..++.|||+.|++|+|+||+||++++++.++|+|||++............ ......+..++++....+..
T Consensus 128 ~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~ 203 (283)
T cd05048 128 HIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQ----SKSLLPVRWMPPEAILYGKF 203 (283)
T ss_pred HHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccccccccc----CCCcccccccCHHHhccCcC
Confidence 35567788999999999999999999999999999999999998765322110000 00011223344444444556
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHH
Q 012411 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVD 386 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~ 386 (464)
+.++|+||+|+.++++++. ...|+...+..++..
T Consensus 204 ~~~sDv~slG~il~el~~~-g~~p~~~~~~~~~~~ 237 (283)
T cd05048 204 TTESDIWSFGVVLWEIFSY-GLQPYYGFSNQEVIE 237 (283)
T ss_pred chhhhHHHHHHHHHHHHcC-CCCCCCCCCHHHHHH
Confidence 7889999999999999861 234555555444443
No 192
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.86 E-value=9.7e-22 Score=187.60 Aligned_cols=198 Identities=14% Similarity=0.070 Sum_probs=124.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|....+|+.||||.+....... ... +.+.+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~-----------------------------~~~~~------ 48 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RER-----------------------------KAAEQ------ 48 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HHH-----------------------------HHHHH------
Confidence 67999999999999998889999999975321110 000 00111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.+ +.+..-+.+...+.......+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 49 e~~~l~~----l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~ 124 (257)
T cd08223 49 EAQLLSQ----LKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHIL 124 (257)
T ss_pred HHHHHHh----CCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1111111 1111111111222222334689999999999987654322 123333 33446677899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||.||+++.++.++|+|||++..+...... . ....+.+..++++.+..+..+.++|+|++|+.+++++++
T Consensus 125 H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~--~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08223 125 HRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDM--A----STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATL 198 (257)
T ss_pred ccCCCchhEEEecCCcEEEecccceEEecccCCc--c----ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcC
Confidence 9999999999999999999999998765322110 0 011122333444444455567789999999999999984
Q ss_pred hccCCCCcCc
Q 012411 371 ALNSSVSELN 380 (464)
Q Consensus 371 ~~~~~~~~~~ 380 (464)
..++...+
T Consensus 199 --~~~~~~~~ 206 (257)
T cd08223 199 --KHAFNAKD 206 (257)
T ss_pred --CCCCCCCC
Confidence 33444433
No 193
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.86 E-value=2.6e-22 Score=207.40 Aligned_cols=181 Identities=17% Similarity=0.125 Sum_probs=118.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..||+|+||.||+|.+..+++.||||..... ....++.+++. +.|+|++.+++
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~---~~~~E~~iL~~----------L~HpnIv~l~~-------------- 227 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA---SSVHEARLLRR----------LSHPAVLALLD-------------- 227 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc---CHHHHHHHHHH----------CCCCCCCcEEE--------------
Confidence 6799999999999999988999999964321 11112222211 12444433322
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
+.......+++||++.| +|.+........++.. ..+..++..+|.|||+.||+|
T Consensus 228 -----------------------~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvH 283 (461)
T PHA03211 228 -----------------------VRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIH 283 (461)
T ss_pred -----------------------EEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 11223556899999965 5655433222233433 345577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|||||+|||++.++.++|+|||+++.+......... ....+.+.+++++.+..+..+.++|+||+|+.+++++.
T Consensus 284 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~----~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~ 357 (461)
T PHA03211 284 RDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH----YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAV 357 (461)
T ss_pred CcCCHHHEEECCCCCEEEcccCCceecccccccccc----cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHH
Confidence 999999999999999999999998765432111000 00112223333444434445788999999999999986
No 194
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.86 E-value=1.2e-20 Score=185.28 Aligned_cols=200 Identities=15% Similarity=0.118 Sum_probs=121.4
Q ss_pred cccccceecEEEEEEEccCCcE--EEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQI--VAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~--VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.||.|+||+||+|.++.+|.. +++|.......+.. ...+.+|++
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~--------------------------------~~~~~~Ei~- 59 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--------------------------------HRDFAGELE- 59 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHH--------------------------------HHHHHHHHH-
Confidence 7799999999999998767765 46665543211100 011112221
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc---------------CCCH--HHHHH
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV--LDLVN 274 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~--~~~~~ 274 (464)
.+.++ .+++++.-..-+....+..+++|||++|++|.+....... .++. ...+.
T Consensus 60 -----~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 130 (303)
T cd05088 60 -----VLCKL----GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130 (303)
T ss_pred -----HHHHh----cCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH
Confidence 11111 1223222111122334567999999999999886542210 1222 23445
Q ss_pred HHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 012411 275 TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (464)
Q Consensus 275 ~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (464)
.++..+++++|+.|++|+|+||+|||++.++.++|+|||++........... .. ....+..|| .......+.+
T Consensus 131 ~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~-~~-~~~~y~aPE-----~~~~~~~~~~ 203 (303)
T cd05088 131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM-GR-LPVRWMAIE-----SLNYSVYTTN 203 (303)
T ss_pred HHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhhhccc-CC-CcccccCHH-----HHhccCCccc
Confidence 6777899999999999999999999999999999999999864322111100 00 011122343 3334445788
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCcHHH
Q 012411 355 VDVTPIVPALRNFFDDALNSSVSELNFKT 383 (464)
Q Consensus 355 ~D~~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (464)
+|+|++|+.++++++. ...|+...+..+
T Consensus 204 ~Di~slG~il~ellt~-g~~p~~~~~~~~ 231 (303)
T cd05088 204 SDVWSYGVLLWEIVSL-GGTPYCGMTCAE 231 (303)
T ss_pred ccchhhhhHHHHHHhc-CCCCcccCChHH
Confidence 9999999999999961 234544444333
No 195
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.86 E-value=8.4e-23 Score=218.45 Aligned_cols=125 Identities=15% Similarity=0.166 Sum_probs=89.9
Q ss_pred ceEEEeeecCcccCcHHHHHhcC--CCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 244 KVLTMEWVEGVKLNEQVAIESQG--LKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 244 ~~LvmE~~~G~~L~~~~~~~~~~--~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
.||-||||+..++.+++..+... .+..-.+.++|..||.|+|+.|+||||+||.||++++++.|||.|||++......
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~ 750 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKEN 750 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhh
Confidence 48999999998888876554443 3444456688889999999999999999999999999999999999999873211
Q ss_pred HH-----------------HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 322 AR-----------------FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 322 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
.. ...++.+++..+-.||......- ..++.++|++|+|..+.||+.+
T Consensus 751 ~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~--~~Yn~KiDmYSLGIVlFEM~yP 814 (1351)
T KOG1035|consen 751 LESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS--NKYNSKIDMYSLGIVLFEMLYP 814 (1351)
T ss_pred hhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc--ccccchhhhHHHHHHHHHHhcc
Confidence 00 01222233333444554332110 1358899999999999999875
No 196
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.86 E-value=9.3e-22 Score=190.82 Aligned_cols=198 Identities=22% Similarity=0.219 Sum_probs=123.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|..+++|.......+.... +..
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~---------------------------------------~~~ 51 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELED---------------------------------------YMV 51 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHH---------------------------------------HHH
Confidence 67999999999999998889999999986442221100 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+..+ +++++.-..-+.......++||||++|++|...........+.. ..+..++..++.++|+.|++|
T Consensus 52 e~~~l~~l-----~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H 126 (282)
T cd06643 52 EIDILASC-----DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIH 126 (282)
T ss_pred HHHHHHHC-----CCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 11111111 12222111111122356789999999999877643222233333 345567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+||.||+++.+++++|+|||++........ ....++ ..+..||.+..........+.++|+|++|+.+++++.
T Consensus 127 ~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~---~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~ 203 (282)
T cd06643 127 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGT---PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQ 203 (282)
T ss_pred cCCCcccEEEccCCCEEEcccccccccccccccccccccc---ccccCHhhccccCCCCCCCCccchhhhHHHHHHHHcc
Confidence 99999999999999999999999876533211 111111 1223344332111122234568999999999999987
Q ss_pred HhccCCCCcCc
Q 012411 370 DALNSSVSELN 380 (464)
Q Consensus 370 ~~~~~~~~~~~ 380 (464)
+ ..|+...+
T Consensus 204 g--~~p~~~~~ 212 (282)
T cd06643 204 I--EPPHHELN 212 (282)
T ss_pred C--CCCccccC
Confidence 3 34554444
No 197
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.86 E-value=7.1e-22 Score=192.72 Aligned_cols=205 Identities=19% Similarity=0.244 Sum_probs=126.5
Q ss_pred HhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHH
Q 012411 125 DSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (464)
Q Consensus 125 ~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (464)
.+.|... +.||.|++|.||+|++..+|+.|++|+..........
T Consensus 11 ~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~---------------------------------- 54 (292)
T cd06644 11 NEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE---------------------------------- 54 (292)
T ss_pred chhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHH----------------------------------
Confidence 3445544 5699999999999999888999999998654222110
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHH
Q 012411 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLR 282 (464)
Q Consensus 205 ~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~ 282 (464)
++..|...+.++ . ++++....-.....+..++||||++|+++...........+. ...+..++..++.
T Consensus 55 -----~~~~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~ 124 (292)
T cd06644 55 -----DYMVEIEILATC----N-HPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQ 124 (292)
T ss_pred -----HHHHHHHHHHhC----C-CCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 011112211111 1 122111111112345678999999999987654332333333 3445567778999
Q ss_pred HHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 012411 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl 360 (464)
++|+.|++|+|+||.||+++.+|+++|+|||++........ ....++ ..+..||.+..........+.++|+|++
T Consensus 125 ~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~---~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 201 (292)
T cd06644 125 YLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGT---PYWMAPEVVMCETMKDTPYDYKADIWSL 201 (292)
T ss_pred HHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCC---ccccCceeeccccccCCCCCchhhhHhH
Confidence 99999999999999999999999999999998875432211 111111 1222333321111112223567899999
Q ss_pred HHHHHHHHHHhccCCCCcCc
Q 012411 361 VPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~ 380 (464)
|+.+++++++ ..++...+
T Consensus 202 G~il~el~~g--~~p~~~~~ 219 (292)
T cd06644 202 GITLIEMAQI--EPPHHELN 219 (292)
T ss_pred HHHHHHHhcC--CCCCcccc
Confidence 9999999974 34544433
No 198
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.86 E-value=7.6e-21 Score=183.74 Aligned_cols=199 Identities=16% Similarity=0.186 Sum_probs=127.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|.+..+|+.||||+.+........ +. +..
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~--------------------------------~~------~~~ 48 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDV--------------------------------SD------IQR 48 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhH--------------------------------HH------HHH
Confidence 6799999999999999889999999998654221100 00 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|...+.++.. ..++++.-+.-+....+..++||||++|++|.++.............+..++..++.++|+.|++|+|
T Consensus 49 e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~d 126 (277)
T cd06917 49 EVALLSQLRQ--SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRD 126 (277)
T ss_pred HHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 2222222221 12233322222222345678999999999998875432222233344556788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCCCCcchHHHHHHHHHHHhc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF-LSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
++|.||+++.++.++|+|||++..+........ . ..+....++++....+. .+..+|+|++|+.+++++++
T Consensus 127 l~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~-~-----~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g-- 198 (277)
T cd06917 127 IKAANILVTNTGNVKLCDFGVAALLNQNSSKRS-T-----FVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG-- 198 (277)
T ss_pred cCHHHEEEcCCCCEEEccCCceeecCCCccccc-c-----ccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhC--
Confidence 999999999999999999999887654321100 0 01112222333332332 46789999999999999984
Q ss_pred cCCCCcCc
Q 012411 373 NSSVSELN 380 (464)
Q Consensus 373 ~~~~~~~~ 380 (464)
..|+...+
T Consensus 199 ~~p~~~~~ 206 (277)
T cd06917 199 NPPYSDVD 206 (277)
T ss_pred CCCCCCCC
Confidence 45555444
No 199
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.86 E-value=4.3e-21 Score=182.24 Aligned_cols=224 Identities=18% Similarity=0.165 Sum_probs=138.0
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||.|++|+||+|....+|+.||+|+.+........ . ...+......+....|+++..+++.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~-~---~~~~~~e~~~l~~l~h~~i~~~~~~~~------------- 63 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRK-E---VEHTLTERNILSRINHPFIVKLHYAFQ------------- 63 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchH-H---HHHHHHHHHHHHHcCCCcHHHHHHHee-------------
Confidence 68999999999999878999999998754321100 0 011111111112223566655554322
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccCCC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADP 294 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl 294 (464)
.....+++|||++|++|.+...... ........+..++..++.++|+.|++|+|+
T Consensus 64 ------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l 119 (250)
T cd05123 64 ------------------------TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119 (250)
T ss_pred ------------------------cCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCC
Confidence 1244579999999999987644321 122333345567888999999999999999
Q ss_pred CCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 295 HPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 295 kp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
+|.||+++.++.++|+|||++....... .....+ ...+..||. ..-...+...|+|++|+.+++++++
T Consensus 120 ~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~---~~~~~~Pe~-----~~~~~~~~~~D~~slG~~~~~l~~g-- 189 (250)
T cd05123 120 KPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG---TPEYLAPEV-----LLGKGYGKAVDWWSLGVLLYEMLTG-- 189 (250)
T ss_pred CcceEEEcCCCcEEEeecCcceecccCCCcccCCcC---CccccChHH-----hCCCCCCchhhHHHHHHHHHHHHHC--
Confidence 9999999999999999999987764321 111111 112233433 2233356789999999999999984
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
..++...+.......+.......+...|..+..+++.+
T Consensus 190 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 227 (250)
T cd05123 190 KPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGL 227 (250)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence 34554444333333333211223333455555554444
No 200
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.86 E-value=1.6e-21 Score=186.66 Aligned_cols=199 Identities=16% Similarity=0.182 Sum_probs=127.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+. +++.||||...++.... +. +..
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~----------------------------------~~------~~~ 50 (261)
T cd05034 12 RKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSP----------------------------------EA------FLQ 50 (261)
T ss_pred eeeccCcceEEEEEEEc-CCceEEEEEecCCccCH----------------------------------HH------HHH
Confidence 68999999999999987 77889999987542110 00 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~g 288 (464)
|...+.++ . +++ +++++. ......+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|
T Consensus 51 e~~~l~~l----~-h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~ 123 (261)
T cd05034 51 EAQIMKKL----R-HDK--LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN 123 (261)
T ss_pred HHHHHhhC----C-CCC--EeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11111111 1 122 222222 22356799999999999988754322 123333 344567778999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++|+|+||+||++++++.++|+|||.+..+.........+......+..|| ...-+..+++.|+|++|+.+++++
T Consensus 124 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE-----~~~~~~~~~~~Di~slG~il~~l~ 198 (261)
T cd05034 124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPE-----AANYGRFTIKSDVWSFGILLTEIV 198 (261)
T ss_pred cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHH-----HhccCCcCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999999877543211111111112233444 333344577899999999999999
Q ss_pred HHhccCCCCcCcHHHHHH
Q 012411 369 DDALNSSVSELNFKTIVD 386 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~ 386 (464)
+. ...|+...+......
T Consensus 199 t~-g~~p~~~~~~~~~~~ 215 (261)
T cd05034 199 TY-GRVPYPGMTNREVLE 215 (261)
T ss_pred hC-CCCCCCCCCHHHHHH
Confidence 72 234554444443333
No 201
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.86 E-value=2.6e-21 Score=208.61 Aligned_cols=204 Identities=16% Similarity=0.223 Sum_probs=143.0
Q ss_pred cccccceecEEEEEEEcc-CCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY-SGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-~g~----~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
..||+|.||.||.|.... .|. .||||.+++... ..++
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~--------------------------------------~~~~ 739 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS--------------------------------------EQEV 739 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCC--------------------------------------HHHH
Confidence 679999999999999862 232 488888875422 2345
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCE-EeceeeccCCCCceEEEeeecCcccCcHHHHH------hcCCCHHHHHH--HHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE------SQGLKVLDLVN--TGIQC 279 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~------~~~~~~~~~~~--~~i~~ 279 (464)
.+|++||..|.+|.| ++| ..-.|-.+ ....+|++|||+||+|..+++.. ...+...+++. .+++.
T Consensus 740 ~~Fl~Ea~~m~~f~H-----pNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~ 813 (1025)
T KOG1095|consen 740 SDFLKEALLMSKFDH-----PNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAK 813 (1025)
T ss_pred HHHHHHHHHHhcCCC-----cceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhh
Confidence 667778877776643 222 22222222 57789999999999999886644 34456666554 55667
Q ss_pred HHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 012411 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (464)
Q Consensus 280 ~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~s 359 (464)
+++||++++||||||-..|+|++....+||.||||++.+-.......-+- ++. ...+|+++...-|+.+.++|+||
T Consensus 814 G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~--a~l--PvkWm~PEsl~d~iFtskSDvWs 889 (1025)
T KOG1095|consen 814 GMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGE--AML--PVKWMPPESLKDGIFTSKSDVWS 889 (1025)
T ss_pred hhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCc--ccc--ceecCCHHHHhhcccccccchhh
Confidence 99999999999999999999999999999999999995433321111110 111 13344555555578899999999
Q ss_pred HHHHHHHHHHHhccCCCCcCcHHHHHH
Q 012411 360 IVPALRNFFDDALNSSVSELNFKTIVD 386 (464)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~~~~~~~ 386 (464)
||..+||+++. ...|+.+.+..+++.
T Consensus 890 FGVllWEifsl-G~~PY~~~~n~~v~~ 915 (1025)
T KOG1095|consen 890 FGVLLWEIFSL-GATPYPSRSNFEVLL 915 (1025)
T ss_pred hHHHHHHHHhC-CCCCCCCcchHHHHH
Confidence 99999999983 456777666544443
No 202
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.86 E-value=7.6e-22 Score=189.03 Aligned_cols=200 Identities=16% Similarity=0.191 Sum_probs=127.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|+||+|... ++..||+|..+++.... +. +.+
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~----------------------------------~~------~~~ 50 (260)
T cd05070 12 KKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSP----------------------------------ES------FLE 50 (260)
T ss_pred heeccccCceEEEEEec-CCceeEEEEecCCCCCH----------------------------------HH------HHH
Confidence 67999999999999987 78889999987642110 01 122
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|..-+.+ +.+..-+.+...+ .....+++|||++|++|.+...... ...+. ...+..++..++.|+|+.|++
T Consensus 51 E~~~l~~----l~~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 124 (260)
T cd05070 51 EAQIMKK----LRHDKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 124 (260)
T ss_pred HHHHHHh----cCCCceEEEEeEE--CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 2222222 2222222222222 2356799999999999988754321 12333 334456777899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||++++++.++|+|||++..+.........+......+..|| ....+..+.++|+|++|+.++++++.
T Consensus 125 H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~l~~l~~~ 199 (260)
T cd05070 125 HRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPE-----AALYGRFTIKSDVWSFGILLTELVTK 199 (260)
T ss_pred cCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChH-----HHhcCCCcchhhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999876443211111111112233444 33344557789999999999999972
Q ss_pred hccCCCCcCcHHHHHH
Q 012411 371 ALNSSVSELNFKTIVD 386 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~ 386 (464)
...|+...+..+...
T Consensus 200 -g~~p~~~~~~~~~~~ 214 (260)
T cd05070 200 -GRVPYPGMNNREVLE 214 (260)
T ss_pred -CCCCCCCCCHHHHHH
Confidence 234554444444343
No 203
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.86 E-value=4.2e-22 Score=190.93 Aligned_cols=198 Identities=17% Similarity=0.159 Sum_probs=125.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+. +++.||||..+++.... + ++..
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~----------------------------------~------~~~~ 50 (261)
T cd05068 12 RKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDP----------------------------------K------DFLA 50 (261)
T ss_pred EEecccCCccEEEEEec-CCeEEEEEeeCCCcccH----------------------------------H------HHHH
Confidence 78999999999999986 67889999987542110 0 0112
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++. ++++.-..-+....+..+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 51 e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 125 (261)
T cd05068 51 EAQIMKKLR-----HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYI 125 (261)
T ss_pred HHHHHHHCC-----CCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 222222221 1222111112233456789999999999988754322 123333 34456677899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||++++++.++|+|||++..+.........+......+..|| ....+..+.+.|+|++|+.++++++.
T Consensus 126 H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~l~el~t~ 200 (261)
T cd05068 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPE-----AALYNRFSIKSDVWSFGILLTEIVTY 200 (261)
T ss_pred eccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCcc-----ccccCCCCchhhHHHHHHHHHHHHhc
Confidence 9999999999999999999999998876532211111111011222333 33334457789999999999999972
Q ss_pred hccCCCCcCcHHH
Q 012411 371 ALNSSVSELNFKT 383 (464)
Q Consensus 371 ~~~~~~~~~~~~~ 383 (464)
...++.......
T Consensus 201 -g~~p~~~~~~~~ 212 (261)
T cd05068 201 -GRMPYPGMTNAE 212 (261)
T ss_pred -CCCCCCCCCHHH
Confidence 234454444333
No 204
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.86 E-value=4.3e-21 Score=186.03 Aligned_cols=183 Identities=19% Similarity=0.190 Sum_probs=121.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||+|+...+...... .. +..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~--------------------------------~~------~~~ 48 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQ--------------------------------KQ------IMS 48 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHH--------------------------------HH------HHH
Confidence 6799999999999999889999999998644211100 01 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|...+.++ +++++.-+.-+.......++||||++|+++.... .........+..++..++.|+|+.|++|+|
T Consensus 49 E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 120 (279)
T cd06619 49 ELEILYKC-----DSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR---KIPEHVLGRIAVAVVKGLTYLWSLKILHRD 120 (279)
T ss_pred HHHHHHhC-----CCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh---cCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence 11111111 1222222222222335568999999999886542 122223344567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+||+||+++.++.++|+|||++..+.........++ +..++++....+..+.+.|+|++|+.+++++++
T Consensus 121 lkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~--------~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g 189 (279)
T cd06619 121 VKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGT--------NAYMAPERISGEQYGIHSDVWSLGISFMELALG 189 (279)
T ss_pred CCHHHEEECCCCCEEEeeCCcceecccccccCCCCC--------hhhcCceeecCCCCCCcchHHHHHHHHHHHHhC
Confidence 999999999999999999999987644322222222 223333333334457789999999999999984
No 205
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.86 E-value=1.1e-21 Score=189.87 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=125.2
Q ss_pred cccccceecEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||.|++|.||+|.... +++.||||+.+........ +
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~----- 53 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDAR--------------------------------K----- 53 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHH--------------------------------H-----
Confidence 679999999999998752 3578999998644222100 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc-------------CCC--HHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-------------GLK--VLDLV 273 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-------------~~~--~~~~~ 273 (464)
++.+|+..+.++. ++++.-..-+.......+++|||++|++|.++...... ... ....+
T Consensus 54 -~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 127 (280)
T cd05049 54 -DFEREAELLTNFQ-----HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQI 127 (280)
T ss_pred -HHHHHHHHHHhcC-----CCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHH
Confidence 1122222222221 11111111122223567999999999999887542210 112 22334
Q ss_pred HHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 012411 274 NTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSP 353 (464)
Q Consensus 274 ~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (464)
..++..++.++|+.|++|+|+||+||+++.++.++|+|||++..+.........+ .....+..++++.+..+..++
T Consensus 128 ~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~ 203 (280)
T cd05049 128 AVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGG----HTMLPIRWMPPESIMYRKFTT 203 (280)
T ss_pred HHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCC----CCcccceecChhhhccCCcch
Confidence 5677789999999999999999999999999999999999987543221000000 000112334455555566688
Q ss_pred CCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 012411 354 DVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 354 ~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (464)
++|+||+|+.++++++. ...|+...+..+..
T Consensus 204 ~~Di~slG~il~e~~~~-g~~p~~~~~~~~~~ 234 (280)
T cd05049 204 ESDVWSFGVVLWEIFTY-GKQPWYGLSNEEVI 234 (280)
T ss_pred hhhHHHHHHHHHHHHhc-CCCCCCCCCHHHHH
Confidence 89999999999999871 23344444433333
No 206
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.86 E-value=3e-21 Score=184.76 Aligned_cols=183 Identities=13% Similarity=0.170 Sum_probs=119.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||.|... ++..||||..+...... + +|..
T Consensus 10 ~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~----------------------------------~------~~~~ 48 (256)
T cd05113 10 KELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE----------------------------------D------EFIE 48 (256)
T ss_pred eEecCcccceEEEEEec-CCCcEEEEEcCCCcccH----------------------------------H------HHHH
Confidence 57999999999999886 56679999876441110 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
|...+.++ ++++ +++++. ......+++|||+.|++|.+.........+.. ..+..++..++.++|+.|+
T Consensus 49 e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 121 (256)
T cd05113 49 EAKVMMKL-----SHEK--LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF 121 (256)
T ss_pred HHHHHhcC-----CCCC--eeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 22222211 1222 223322 22345699999999999988754322233433 3455677889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|+||+||+++.++.++|+|||.+..+.........+......+..||.. ..+..+.+.|+|++|+.++++++
T Consensus 122 ~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~-----~~~~~~~~~Di~slG~~l~~l~~ 196 (256)
T cd05113 122 IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL-----LYSKFSSKSDVWAFGVLMWEVYS 196 (256)
T ss_pred eccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHH-----hcCcccchhHHHHHHHHHHHHhc
Confidence 9999999999999999999999999876533211111111111223445443 33445778999999999999986
No 207
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.85 E-value=4.8e-22 Score=194.32 Aligned_cols=190 Identities=23% Similarity=0.299 Sum_probs=121.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHH--HHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA--IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~--~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.||+|++|+||+|....+|+.||||..+...... ...+...... ++.+....|++++.+++.+.
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e----~~~l~~~~h~~i~~~~~~~~--------- 72 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALRE----IKLLQELKHPNIIGLLDVFG--------- 72 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHH----HHHHhhcCCCCChhhhheee---------
Confidence 56999999999999998789999999987543220 0000001111 11111222444444433211
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
.....++||||+ +++|.++........+.. ..+..++..++.++|++|+
T Consensus 73 ----------------------------~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 123 (298)
T cd07841 73 ----------------------------HKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI 123 (298)
T ss_pred ----------------------------cCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 124568999999 888887644322123333 3455778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|++|+||+++.+|.++|+|||++......... .........+..||.+ ......+.+.|+|++|+.++++++
T Consensus 124 ~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~----~~~~~~~~~~Dv~slG~il~e~~~ 198 (298)
T cd07841 124 LHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK-MTHQVVTRWYRAPELL----FGARHYGVGVDMWSVGCIFAELLL 198 (298)
T ss_pred eecCCChhhEEEcCCCCEEEccceeeeeccCCCcc-ccccccceeeeCHHHH----hCCCCCCcHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999998876432110 0000111122334432 122334678999999999999998
Q ss_pred H
Q 012411 370 D 370 (464)
Q Consensus 370 ~ 370 (464)
+
T Consensus 199 g 199 (298)
T cd07841 199 R 199 (298)
T ss_pred C
Confidence 5
No 208
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.85 E-value=9.4e-22 Score=192.80 Aligned_cols=202 Identities=19% Similarity=0.237 Sum_probs=123.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|++..+++.||+|..+......... ...+.+ ..+..+.|+|++.+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~--~~~~E~----~~l~~l~h~nI~~~~~-------------- 71 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPC--TAIREV----SLLKDLKHANIVTLHD-------------- 71 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchh--HHHHHH----HHHHhcCCCCcceEEE--------------
Confidence 78999999999999998889999999986432111000 000000 0011112333332222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
+.......++||||++| +|.+.........+. ...+..++..++.++|+.|++|
T Consensus 72 -----------------------~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H 127 (301)
T cd07873 72 -----------------------IIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLH 127 (301)
T ss_pred -----------------------EEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 11223456899999986 665543322223333 3344567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.++.++|+|||++......... .........+..||.+. .....+.++|+|++|+.+++++++
T Consensus 128 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~~PE~~~----~~~~~~~~~Dv~slG~~l~el~tg- 201 (301)
T cd07873 128 RDLKPQNLLINERGELKLADFGLARAKSIPTKT-YSNEVVTLWYRPPDILL----GSTDYSTQIDMWGVGCIFYEMSTG- 201 (301)
T ss_pred CCCCHHHEEECCCCcEEECcCcchhccCCCCCc-ccccceeecccCcHHHh----CCCCCccHHHHHHHHHHHHHHHhC-
Confidence 999999999999999999999998764322110 00111122233444331 112246678999999999999984
Q ss_pred ccCCCCcCcHHHHHH
Q 012411 372 LNSSVSELNFKTIVD 386 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~ 386 (464)
..++...+..+...
T Consensus 202 -~~~f~~~~~~~~~~ 215 (301)
T cd07873 202 -RPLFPGSTVEEQLH 215 (301)
T ss_pred -CCCCCCCCHHHHHH
Confidence 34555544444333
No 209
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.85 E-value=1.9e-21 Score=187.58 Aligned_cols=199 Identities=15% Similarity=0.103 Sum_probs=121.1
Q ss_pred cccccceecEEEEEEEccCCc--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQ--IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~--~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.||+|++|.||+|.+..+|. .+++|..+........ +. +
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~--------------------------------~~------~ 42 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--------------------------------RD------F 42 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHH--------------------------------HH------H
Confidence 368999999999999986775 4688877633211100 01 1
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---------------cCCCH--HHHHH
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLKV--LDLVN 274 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~--~~~~~ 274 (464)
..|...+.++ .+++++.-..-+....+..+++|||++|++|.+...... ..... ...+.
T Consensus 43 ~~E~~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 118 (270)
T cd05047 43 AGELEVLCKL----GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118 (270)
T ss_pred HHHHHHHHhh----ccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH
Confidence 1122222222 122222111111223355789999999999988754221 01222 23445
Q ss_pred HHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 012411 275 TGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (464)
Q Consensus 275 ~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (464)
.++..+++++|+.|++|+|+||.||+++.++.++|+|||++............ ......++++.+.....+.+
T Consensus 119 ~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~-------~~~~~y~apE~~~~~~~~~~ 191 (270)
T cd05047 119 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG-------RLPVRWMAIESLNYSVYTTN 191 (270)
T ss_pred HHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCC-------CCccccCChHHHccCCCCch
Confidence 66778999999999999999999999999999999999998643322111000 00112333334344455778
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCcHH
Q 012411 355 VDVTPIVPALRNFFDDALNSSVSELNFK 382 (464)
Q Consensus 355 ~D~~sl~~~l~~~~~~~~~~~~~~~~~~ 382 (464)
+|+|++|+.++++++. ...|+...+..
T Consensus 192 ~Di~slG~il~el~~~-g~~pf~~~~~~ 218 (270)
T cd05047 192 SDVWSYGVLLWEIVSL-GGTPYCGMTCA 218 (270)
T ss_pred hhHHHHHHHHHHHHcC-CCCCccccCHH
Confidence 9999999999999861 23455444433
No 210
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.85 E-value=2.7e-21 Score=185.77 Aligned_cols=193 Identities=16% Similarity=0.154 Sum_probs=122.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.||+|+.+...... ..+....+.+...+..+....|++++.+++.+.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----------- 73 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTS-SEQEEVVEALRKEIRLMARLNHPHIIRMLGATC----------- 73 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCc-hhHHHHHHHHHHHHHHHHHcCCCceehhhceec-----------
Confidence 67999999999999998899999999986432111 011111111111111122223444444433211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
.....+++|||++|++|.+..... ...+.. ..+..++..++.++|+.|++|
T Consensus 74 --------------------------~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i~H 126 (268)
T cd06630 74 --------------------------EDSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQIIH 126 (268)
T ss_pred --------------------------cCCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 124567999999999998875422 223333 334577888999999999999
Q ss_pred CCCCCcceEEccCC-cEEEEecCCCCcCCHHHHH--HHHH-HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 292 ADPHPGNLLATPEG-KLAFLDFGMMSETPEEARF--AIIG-HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 292 ~Dlkp~Nili~~~g-~i~l~DFGl~~~l~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
+|++|+||+++.++ .++|+|||.+..+...... ...+ ...+..+..||. ......+.+.|+|++|+.++++
T Consensus 127 ~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~-----~~~~~~~~~~Dv~slG~~l~~l 201 (268)
T cd06630 127 RDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV-----LRGEQYGRSCDVWSVGCVIIEM 201 (268)
T ss_pred CCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhH-----hccCCCCcccchHHHHHHHHHH
Confidence 99999999998776 5999999998876543110 0000 011122233443 3333446789999999999999
Q ss_pred HHH
Q 012411 368 FDD 370 (464)
Q Consensus 368 ~~~ 370 (464)
+.+
T Consensus 202 ~~g 204 (268)
T cd06630 202 ATA 204 (268)
T ss_pred HhC
Confidence 984
No 211
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.85 E-value=3.5e-21 Score=203.75 Aligned_cols=192 Identities=14% Similarity=0.120 Sum_probs=113.3
Q ss_pred CcccccceecEEEEEEEccC----CcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYS----GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~----g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
.+.||+|+||.||+|++..+ |..||||......... ......+...
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e----~~~~e~l~~~-------------------------- 186 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE----IWMNERVRRA-------------------------- 186 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH----HHHHHHHHhh--------------------------
Confidence 47899999999999999877 8999999875432111 0000000000
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCC---------------------
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--------------------- 267 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--------------------- 267 (464)
...++..+...+... .. .......+|||||+++++|.++........
T Consensus 187 -----~~~~~~~~~~~~~~~------~~-~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~ 254 (566)
T PLN03225 187 -----CPNSCADFVYGFLEP------VS-SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLEREN 254 (566)
T ss_pred -----chhhHHHHHHhhhcc------cc-cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhH
Confidence 000111111111000 00 112345689999999999987643221110
Q ss_pred CHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEcc-CCcEEEEecCCCCcCCHHHH---HHHHHHHHHHHhcCHHHHH-
Q 012411 268 KVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEAR---FAIIGHVVHMVNRDYEAMA- 342 (464)
Q Consensus 268 ~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~-~g~i~l~DFGl~~~l~~~~~---~~~~~~~~~~~~~~~~~~~- 342 (464)
.....+..++..+|.|+|+.||+||||||+|||++. ++.++|+|||+++.+..... ..++++ ..+..||...
T Consensus 255 ~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t---~~Y~APE~~~~ 331 (566)
T PLN03225 255 KIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLD---PRYAAPEQYIM 331 (566)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccC---CCccChHHhhc
Confidence 011235567788999999999999999999999985 58999999999986532211 111111 1122233210
Q ss_pred -----------------HHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 343 -----------------RDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 343 -----------------~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+.++..+ .+.++|+||+|+.+++++.+
T Consensus 332 ~~~~~~~~~~~~~~~~sp~l~~~~-~~~k~DVwSlGviL~el~~~ 375 (566)
T PLN03225 332 STQTPSAPSAPVATALSPVLWQLN-LPDRFDIYSAGLIFLQMAFP 375 (566)
T ss_pred cCCCCCCccccccccccchhcccc-CCCCcccHHHHHHHHHHHhC
Confidence 0111111 23456999999999999864
No 212
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.85 E-value=5.6e-21 Score=191.14 Aligned_cols=201 Identities=18% Similarity=0.255 Sum_probs=125.3
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
-+.||+|++|.||+|....+|+.||||+......... ....+...+..+....|+|++.+.+.+..
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 85 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL-----FAKRAYRELRLLKHMKHENVIGLLDVFTP--------- 85 (343)
T ss_pred EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchH-----HHHHHHHHHHHHHhcCCCCccceeeeecC---------
Confidence 3789999999999999988999999998854311100 00001111111112234554444332210
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
..........++||||+ |++|.+.........+....+..++..++.++|+.|++|+
T Consensus 86 ----------------------~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~ 142 (343)
T cd07880 86 ----------------------DLSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHR 142 (343)
T ss_pred ----------------------CccccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 00001113458999999 6677766433233333444556778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
|+||+||+++.++.++|+|||++........ ...+ ...+..||.+. .....+.+.|+|++|+.+++++.+
T Consensus 143 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~---~~~y~aPE~~~----~~~~~~~~~Di~slG~ll~~l~~g-- 212 (343)
T cd07880 143 DLKPGNLAVNEDCELKILDFGLARQTDSEMT-GYVV---TRWYRAPEVIL----NWMHYTQTVDIWSVGCIMAEMLTG-- 212 (343)
T ss_pred CCCHHHEEEcCCCCEEEeecccccccccCcc-cccc---CCcccCHHHHh----CCCCCCcHHHHHHHHHHHHHHHhC--
Confidence 9999999999999999999999987643311 1111 11223344432 112346789999999999999984
Q ss_pred cCCCCcCc
Q 012411 373 NSSVSELN 380 (464)
Q Consensus 373 ~~~~~~~~ 380 (464)
..++...+
T Consensus 213 ~~pf~~~~ 220 (343)
T cd07880 213 KPLFKGHD 220 (343)
T ss_pred CCCCCCCC
Confidence 34555443
No 213
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.85 E-value=2.9e-21 Score=186.09 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=88.0
Q ss_pred CceEEEeeecCcccCcHHHHHh-----cCCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCC
Q 012411 243 GKVLTMEWVEGVKLNEQVAIES-----QGLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMM 315 (464)
Q Consensus 243 ~~~LvmE~~~G~~L~~~~~~~~-----~~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~ 315 (464)
..+++|||++|++|.+...... ...+. ...+..++..++.|+|+.|++|+|+||+||+++.++.++|+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 4689999999999887643221 11233 2344567888999999999999999999999999999999999999
Q ss_pred CcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 316 SETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 316 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
..+....... .+ ......++.++++.......+++.|+|++|+.+++++.
T Consensus 160 ~~~~~~~~~~-~~---~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~ 209 (272)
T cd05075 160 KKIYNGDYYR-QG---RIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT 209 (272)
T ss_pred cccCccccee-cC---CcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHc
Confidence 8764322100 00 11122334444555444556788999999999999987
No 214
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.85 E-value=1.1e-21 Score=213.52 Aligned_cols=238 Identities=13% Similarity=0.104 Sum_probs=139.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|+||.||+|++..+++.||+|++.......- ....+..
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~-------------------------------~~~~~~~------ 61 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKER-------------------------------EKSQLVI------ 61 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHH-------------------------------HHHHHHH------
Confidence 689999999999999998899999999864311100 0011111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec-cCCCCceEEEeeecCcccCcHHHHHh---cCCCHH--HHHHHHHHHHHHHHHHC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVL--DLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~--~~~~~~i~~~l~~lh~~ 287 (464)
|+..+.++ .+..-+.+...+. ......+|||||++|++|.+.+.... ..++.. ..+..++..+|.|||..
T Consensus 62 EI~IL~~L----~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~ 137 (1021)
T PTZ00266 62 EVNVMREL----KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL 137 (1021)
T ss_pred HHHHHHHc----CCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 11111111 1111111111111 12234689999999999988754311 223433 34456788899999985
Q ss_pred -------CcccCCCCCcceEEccC-----------------CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHH
Q 012411 288 -------GYFHADPHPGNLLATPE-----------------GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMAR 343 (464)
Q Consensus 288 -------gi~H~Dlkp~Nili~~~-----------------g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (464)
+|+|+||||+|||++.+ +.++|+|||++..+....... ...+++.++++
T Consensus 138 g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~-------s~vGTp~YmAP 210 (1021)
T PTZ00266 138 KDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAH-------SCVGTPYYWSP 210 (1021)
T ss_pred ccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccccc-------ccCCCccccCH
Confidence 49999999999999642 348999999998764332110 11122333344
Q ss_pred HHHH--cCCCCCCCCcchHHHHHHHHHHHhccCCCCcC-cHHHHHHHHHHHHhhCC-CCCChHHHHHHHHHHHHHHhhcc
Q 012411 344 DYYA--LDFLSPDVDVTPIVPALRNFFDDALNSSVSEL-NFKTIVDGLGAVLYQYP-FNVPAYYALILRSLTVLEGLALY 419 (464)
Q Consensus 344 ~~~~--~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~-~~~p~~~~~l~r~l~~leg~~~~ 419 (464)
+++. ....++++|+|||||++++++++ ..|+... ++..++..+... ...+ ...|+.+..+++.+ +.
T Consensus 211 EvL~ge~~~~s~KSDVWSLG~ILYELLTG--k~PF~~~~~~~qli~~lk~~-p~lpi~~~S~eL~dLI~~~-------L~ 280 (1021)
T PTZ00266 211 ELLLHETKSYDDKSDMWALGCIIYELCSG--KTPFHKANNFSQLISELKRG-PDLPIKGKSKELNILIKNL-------LN 280 (1021)
T ss_pred HHHhccCCCCCchhHHHHHHHHHHHHHHC--CCCCCcCCcHHHHHHHHhcC-CCCCcCCCCHHHHHHHHHH-------hc
Confidence 4332 22357789999999999999984 3455433 233333322211 1111 22456666666665 56
Q ss_pred cCCCCChHHh
Q 012411 420 ADPNFKVLAA 429 (464)
Q Consensus 420 ldP~~~~~~~ 429 (464)
.+|.-++...
T Consensus 281 ~dPeeRPSa~ 290 (1021)
T PTZ00266 281 LSAKERPSAL 290 (1021)
T ss_pred CChhHCcCHH
Confidence 6776665543
No 215
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.85 E-value=2.1e-21 Score=186.83 Aligned_cols=122 Identities=12% Similarity=0.126 Sum_probs=85.3
Q ss_pred ceEEEeeecCcccCcHHHHHhc-----CCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCC
Q 012411 244 KVLTMEWVEGVKLNEQVAIESQ-----GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 316 (464)
Q Consensus 244 ~~LvmE~~~G~~L~~~~~~~~~-----~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~ 316 (464)
.+++|||+++++|......... ..+. ...+..++..++.|+|+.|++|+|+||+||++++++.++|+|||+++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCcccee
Confidence 5899999999999876533221 1232 23445677889999999999999999999999999999999999988
Q ss_pred cCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 317 ETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 317 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
.+......... .........++++....+..+.++|+||+|+.+++++.
T Consensus 162 ~~~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~ 210 (273)
T cd05035 162 KIYSGDYYRQG----RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210 (273)
T ss_pred ecccccccccc----ccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHh
Confidence 65432110000 00001112233333334456788999999999999987
No 216
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.85 E-value=7.1e-21 Score=183.74 Aligned_cols=196 Identities=20% Similarity=0.157 Sum_probs=127.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||+|+........ +. ..+.+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~-----------------------------~~~~~------ 48 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAED---EI-----------------------------EDIQQ------ 48 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccch---HH-----------------------------HHHHH------
Confidence 67999999999999998889999999986331100 00 00111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|...+..+ . ++++.-+..+.......++||||++|++|.+.......+......+..++..++.++|+.|++|+|
T Consensus 49 e~~~l~~l----~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~d 123 (274)
T cd06609 49 EIQFLSQC----R-SPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRD 123 (274)
T ss_pred HHHHHHHc----C-CCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 11111111 1 222222222222335678999999999998875443233334445567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~ 373 (464)
++|+||+++.+|.++|+|||++..+....... .. ..+.+..++++....+..+.+.|+|++|+.+++++++ .
T Consensus 124 l~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~-~~-----~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg--~ 195 (274)
T cd06609 124 IKAANILLSEEGDVKLADFGVSGQLTSTMSKR-NT-----FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKG--E 195 (274)
T ss_pred CCHHHEEECCCCCEEEcccccceeeccccccc-cc-----ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhC--C
Confidence 99999999999999999999998775432110 00 0111222333333334467889999999999999984 4
Q ss_pred CCCCcCc
Q 012411 374 SSVSELN 380 (464)
Q Consensus 374 ~~~~~~~ 380 (464)
.|+...+
T Consensus 196 ~p~~~~~ 202 (274)
T cd06609 196 PPLSDLH 202 (274)
T ss_pred CCcccCc
Confidence 4554444
No 217
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.85 E-value=9.8e-22 Score=187.61 Aligned_cols=200 Identities=14% Similarity=0.131 Sum_probs=127.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||++.+..+|+.||+|..+....... . +.+..
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~---~-----------------------------~~~~~------ 47 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSA---V-----------------------------EDSRK------ 47 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHH---H-----------------------------HHHHH------
Confidence 679999999999999998999999998853211100 0 00111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.+ + +++++.-..-.....+..+++|||++|++|.+...... ...+. ...+..++..++.++|+.|++
T Consensus 48 e~~~l~~----l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~ 122 (255)
T cd08219 48 EAVLLAK----M-KHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVL 122 (255)
T ss_pred HHHHHHh----C-CCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 1111111 1 12222211212233456799999999999877643221 12333 233456788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||.||++++++.++++|||++..+....... ....+.+..++++.......+.++|+|++|+.+++++++
T Consensus 123 H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g 196 (255)
T cd08219 123 HRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA------CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTL 196 (255)
T ss_pred cCCCCcceEEECCCCcEEEcccCcceeeccccccc------ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhc
Confidence 99999999999999999999999987664322110 001122223334444444457789999999999999984
Q ss_pred hccCCCCcCcHHHH
Q 012411 371 ALNSSVSELNFKTI 384 (464)
Q Consensus 371 ~~~~~~~~~~~~~~ 384 (464)
..|+...+....
T Consensus 197 --~~p~~~~~~~~~ 208 (255)
T cd08219 197 --KHPFQANSWKNL 208 (255)
T ss_pred --cCCCCCCCHHHH
Confidence 345555444433
No 218
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.85 E-value=3.8e-21 Score=183.64 Aligned_cols=119 Identities=14% Similarity=0.104 Sum_probs=86.6
Q ss_pred CCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCC-------cEEEEec
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG-------KLAFLDF 312 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g-------~i~l~DF 312 (464)
...++||||++|++|.++........+... .+..++..++.|+|+.|++|+|+||+||+++.++ .++|+||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 456899999999999887554332344333 3456788899999999999999999999999887 7999999
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcchHHHHHHHHHHH
Q 012411 313 GMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD--FLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 313 Gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|++..+..... ..+ ....++++.+..+ ..+.+.|+|++|+.+++++.+
T Consensus 153 g~a~~~~~~~~--~~~--------~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~ 202 (259)
T cd05037 153 GIPITVLSREE--RVE--------RIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSN 202 (259)
T ss_pred Ccccccccccc--ccc--------CCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhC
Confidence 99887644211 111 1112333333333 457789999999999999874
No 219
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.85 E-value=1.9e-21 Score=192.18 Aligned_cols=200 Identities=17% Similarity=0.108 Sum_probs=123.7
Q ss_pred cccccceecEEEEEEEccCCcE----EEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLKYSGQI----VAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~----VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|+||+||+|++..+|+. ||||+.+.........+ +......+....|+|++.+++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~------~~~e~~~l~~l~h~niv~~~g---------- 76 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE------ILDEAYVMASVDNPHVCRLLG---------- 76 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHH------HHHHHHHHHhCCCCCCCeEEE----------
Confidence 7899999999999998656654 89999864322111000 000000011112232222111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (464)
.. .....++++||+++++|.+.........+... .+..++..+|.|+|+.
T Consensus 77 --------------------------~~--~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~ 128 (316)
T cd05108 77 --------------------------IC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER 128 (316)
T ss_pred --------------------------EE--cCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 11 12456799999999999887543332333333 3446788899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
|++|+|+||+||+++.++.++|+|||++..+....... ..+..... .+++++....+..+.++|+|++|+.+++
T Consensus 129 ~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~-----~y~apE~~~~~~~~~~~Di~slGv~l~e 203 (316)
T cd05108 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPI-----KWMALESILHRIYTHQSDVWSYGVTVWE 203 (316)
T ss_pred CeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccce-----eecChHHhccCCCCchhhhHHHHHHHHH
Confidence 99999999999999999999999999998765332110 00000011 2233333334455788999999999999
Q ss_pred HHHHhccCCCCcCcHHH
Q 012411 367 FFDDALNSSVSELNFKT 383 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~~ 383 (464)
+++ +...++.+.+..+
T Consensus 204 l~t-~g~~p~~~~~~~~ 219 (316)
T cd05108 204 LMT-FGSKPYDGIPASE 219 (316)
T ss_pred HHc-CCCCCCCCCCHHH
Confidence 886 1334555544333
No 220
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.85 E-value=3.2e-21 Score=185.38 Aligned_cols=203 Identities=16% Similarity=0.196 Sum_probs=125.9
Q ss_pred CcccccceecEEEEEEEccC---CcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 133 PSPIAAASLGQVYKAQLKYS---GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~---g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
.+.||+|+||.||+|.++.+ ...||||+.++........+
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~------------------------------------- 51 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLD------------------------------------- 51 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHH-------------------------------------
Confidence 37899999999999998643 45799999875532211110
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLL 285 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh 285 (464)
|..|...+.++ . +++ +.+++. ......+++|||++|++|.+.........+... .+..++..++.++|
T Consensus 52 -~~~e~~~l~~l----~-h~~--i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh 123 (266)
T cd05033 52 -FLTEASIMGQF----D-HPN--IIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS 123 (266)
T ss_pred -HHHHHHHHHhC----C-CCC--cceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11121111111 1 111 111111 123456899999999999887543332334433 33466778999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
+.|++|+|+||.||+++.++.++|+|||++..+...... .. . ......+..++++....+..+.+.|+|++|+.++
T Consensus 124 ~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~-~--~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~ 199 (266)
T cd05033 124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT-YT-T--KGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMW 199 (266)
T ss_pred hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccc-ee-c--cCCCCCccccChhhhccCCCccccchHHHHHHHH
Confidence 999999999999999999999999999999877421110 00 0 0000112233444444455678899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHH
Q 012411 366 NFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~ 385 (464)
+++. ....|+.+.....+.
T Consensus 200 ~l~~-~g~~p~~~~~~~~~~ 218 (266)
T cd05033 200 EVMS-YGERPYWDMSNQDVI 218 (266)
T ss_pred HHHc-cCCCCCCCCCHHHHH
Confidence 9886 123455444444333
No 221
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.85 E-value=1.7e-21 Score=189.08 Aligned_cols=141 Identities=15% Similarity=0.143 Sum_probs=94.0
Q ss_pred CCceEEEeeecCcccCcHHHHHh---------------cCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIES---------------QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE 304 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~ 304 (464)
...++++||+++++|.+...... ...+.. ..+..++..++.|+|+.|++|+|+||+||+++++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 45689999999999887653211 112222 2345678889999999999999999999999999
Q ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHH
Q 012411 305 GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTI 384 (464)
Q Consensus 305 g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~ 384 (464)
+.++|+|||+++.+.........+. ....+..++++....+..+.+.|+||+|+.++++++. ...++...+..++
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~-g~~p~~~~~~~~~ 235 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGN----SLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSY-GLQPYCGYSNQDV 235 (283)
T ss_pred CceEecccccccccccchheeeccC----ccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcC-CCCCCCCCCHHHH
Confidence 9999999999887643321111110 0011223334444455568889999999999999872 2234555444444
Q ss_pred HHH
Q 012411 385 VDG 387 (464)
Q Consensus 385 ~~~ 387 (464)
...
T Consensus 236 ~~~ 238 (283)
T cd05091 236 IEM 238 (283)
T ss_pred HHH
Confidence 433
No 222
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.85 E-value=4.1e-21 Score=186.40 Aligned_cols=189 Identities=20% Similarity=0.219 Sum_probs=123.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|.++.+|+.||+|+......... ..+.+...++.+....|+++..+.+.+..
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 71 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKM-----VKKIAMREIRMLKQLRHENLVNLIEVFRR---------- 71 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcch-----hhHHHHHHHHHHHhcCCcchhhHHHhccc----------
Confidence 679999999999999987899999998753321110 00000111111122335666555543321
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
....++||||++|+.+.+.... ..+.+. ...+..++..++.|+|+.|++|
T Consensus 72 ---------------------------~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h 123 (286)
T cd07846 72 ---------------------------KKRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSHNIIH 123 (286)
T ss_pred ---------------------------CCeEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 2456799999999888765332 122333 3344567788999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+|++|+||++++++.++|+|||++..+...... .........+..||.... ....+.+.|+||+|+.+++++++
T Consensus 124 ~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~----~~~~~~~~Dv~slG~~l~el~~g 197 (286)
T cd07846 124 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEV-YTDYVATRWYRAPELLVG----DTKYGRAVDIWAVGCLVTEMLTG 197 (286)
T ss_pred cCCCHHHEEECCCCcEEEEeeeeeeeccCCccc-cCcccceeeccCcHHhcc----ccccCchHhHHHHHHHHHHHHcC
Confidence 999999999999999999999998876433211 111111223334554321 12345679999999999999985
No 223
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.85 E-value=1e-21 Score=188.22 Aligned_cols=194 Identities=16% Similarity=0.154 Sum_probs=122.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|.+. ++..||+|..+++.... +. +..
T Consensus 12 ~~ig~g~~~~v~~~~~~-~~~~~~lK~~~~~~~~~----------------------------------~~------~~~ 50 (260)
T cd05069 12 VKLGQGCFGEVWMGTWN-GTTKVAIKTLKPGTMMP----------------------------------EA------FLQ 50 (260)
T ss_pred eeecCcCCCeEEEEEEc-CCceEEEEEcccCCccH----------------------------------HH------HHH
Confidence 57999999999999987 55679999887542110 01 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc-CCCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++ .+..-+.+...+ .....+++|||++|++|.+....... ..+. ...+..++..++.|+|+.|++
T Consensus 51 E~~~l~~l----~h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 124 (260)
T cd05069 51 EAQIMKKL----RHDKLVPLYAVV--SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYI 124 (260)
T ss_pred HHHHHHhC----CCCCeeeEEEEE--cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 22221111 111222222222 23457899999999999887543221 1232 234456778899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||++++++.++|+|||++..+.........+......+..|| ....+..+.+.|+|++|+.++++++.
T Consensus 125 H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe-----~~~~~~~~~~~Di~slG~~l~el~t~ 199 (260)
T cd05069 125 HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPE-----AALYGRFTIKSDVWSFGILLTELVTK 199 (260)
T ss_pred ecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHH-----HhccCCcChHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999766432211111111112233344 33334457789999999999999872
Q ss_pred hccCCCCcCc
Q 012411 371 ALNSSVSELN 380 (464)
Q Consensus 371 ~~~~~~~~~~ 380 (464)
...|+.+..
T Consensus 200 -g~~p~~~~~ 208 (260)
T cd05069 200 -GRVPYPGMV 208 (260)
T ss_pred -CCCCCCCCC
Confidence 123444443
No 224
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.85 E-value=1.5e-21 Score=191.25 Aligned_cols=192 Identities=18% Similarity=0.159 Sum_probs=125.3
Q ss_pred hhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHH
Q 012411 126 SIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (464)
Q Consensus 126 ~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (464)
..|... +.||+|++|.||+|....+|+.||+|.......... +.+
T Consensus 19 ~~y~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~---------------------------------~~~ 63 (297)
T cd06656 19 KKYTRF--EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK---------------------------------ELI 63 (297)
T ss_pred hhceee--eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH---------------------------------HHH
Confidence 444444 679999999999999987999999998864311110 001
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHH
Q 012411 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQ 283 (464)
Q Consensus 206 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~ 283 (464)
.+ |...+.. . +++++.-+.-+.......++||||++|++|.+.... ...+. ...+..++..++.+
T Consensus 64 ~~------e~~~l~~----~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~ 130 (297)
T cd06656 64 IN------EILVMRE----N-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDF 130 (297)
T ss_pred HH------HHHHHHh----C-CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHH
Confidence 11 1111111 1 223322222222334567999999999999887432 23333 33444667789999
Q ss_pred HHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
+|+.|++|+|+||+||+++.+|.++|+|||++.......... ....+.+..++++....+..+.+.|+|++|+.
T Consensus 131 LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvi 204 (297)
T cd06656 131 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 204 (297)
T ss_pred HHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc------CcccCCccccCHHHHcCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999987764432110 00112223333444444445778999999999
Q ss_pred HHHHHHHh
Q 012411 364 LRNFFDDA 371 (464)
Q Consensus 364 l~~~~~~~ 371 (464)
+++++++.
T Consensus 205 l~~l~tg~ 212 (297)
T cd06656 205 AIEMVEGE 212 (297)
T ss_pred HHHHHhCC
Confidence 99999853
No 225
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.85 E-value=1.4e-21 Score=187.28 Aligned_cols=198 Identities=14% Similarity=0.143 Sum_probs=126.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|..+ +++.||+|......... . ++..
T Consensus 12 ~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~----------------------------------~------~~~~ 50 (260)
T cd05067 12 KKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSP----------------------------------E------AFLA 50 (260)
T ss_pred eeeccCccceEEeeecC-CCceEEEEEecCCCCcH----------------------------------H------HHHH
Confidence 67999999999999987 88999999887542210 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCE-EeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHH--HHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLD--LVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~--~~~~~i~~~l~~lh~~gi 289 (464)
|...+.++ . ++++ .+..++ .....+++|||++|++|.+...... ...+... .+..++..++.++|+.|+
T Consensus 51 E~~~l~~l----~-h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i 123 (260)
T cd05067 51 EANLMKQL----Q-HPRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY 123 (260)
T ss_pred HHHHHHhc----C-CcCeeeEEEEE--ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 22222221 1 1221 111222 1345789999999999987643322 2233333 345677789999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|+||+||++++++.++|+|||++............+......+..|| ....+..+.+.|+|++|+.++++++
T Consensus 124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe-----~~~~~~~~~~~Di~slG~~l~el~~ 198 (260)
T cd05067 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE-----AINYGTFTIKSDVWSFGILLTEIVT 198 (260)
T ss_pred ecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHH-----HhccCCcCcccchHHHHHHHHHHHh
Confidence 99999999999999999999999999876532111111111111223343 4444556788999999999999987
Q ss_pred HhccCCCCcCcHHHHH
Q 012411 370 DALNSSVSELNFKTIV 385 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~ 385 (464)
. ...|+...+..++.
T Consensus 199 ~-g~~p~~~~~~~~~~ 213 (260)
T cd05067 199 Y-GRIPYPGMTNPEVI 213 (260)
T ss_pred C-CCCCCCCCChHHHH
Confidence 2 33455544433333
No 226
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.85 E-value=7.5e-22 Score=191.65 Aligned_cols=184 Identities=22% Similarity=0.256 Sum_probs=119.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChH-----HHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-----EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-----~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|.+..+|+.||||+.+.... ..+..++.+++ ...|+++..+++.+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~----------~l~~~~i~~~~~~~------- 69 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLR----------QLRHENIVNLKEAF------- 69 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHH----------hcCCCCeeehhheE-------
Confidence 679999999999999988899999998764311 11111111111 11233333333221
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (464)
. .....+++|||++++.+..... ...+.+ ....+..++..++.++|.
T Consensus 70 -----------------------------~-~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~ 118 (288)
T cd07833 70 -----------------------------R-RKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHS 118 (288)
T ss_pred -----------------------------E-ECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 1245689999999876655422 222233 333455678889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALR 365 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~D~~sl~~~l~ 365 (464)
.|++|+|++|+||+++.++.++|+|||++..+................+..||.+ ... ..+.+.|+|++|+.++
T Consensus 119 ~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~-----~~~~~~~~~~Dv~slG~~l~ 193 (288)
T cd07833 119 HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELL-----VGDTNYGKPVDVWAIGCIMA 193 (288)
T ss_pred CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchh-----cCCCCcCchhhHHHHHHHHH
Confidence 9999999999999999999999999999887654432111111111122334433 223 4467899999999999
Q ss_pred HHHHH
Q 012411 366 NFFDD 370 (464)
Q Consensus 366 ~~~~~ 370 (464)
+++++
T Consensus 194 ~l~~g 198 (288)
T cd07833 194 ELLDG 198 (288)
T ss_pred HHHhC
Confidence 99984
No 227
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.85 E-value=1e-21 Score=195.07 Aligned_cols=200 Identities=14% Similarity=0.187 Sum_probs=122.0
Q ss_pred cccccc--eecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAA--SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~G--s~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.||+| +++.||++..+.+|+.||||.+....... ...+.+.+|+..
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------~~~~~~~~e~~~ 52 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-------------------------------EMVTFLQGELHV 52 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccH-------------------------------HHHHHHHHHHHH
Confidence 458888 78999999999899999999986432110 000111111111
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCC
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~g 288 (464)
...+ +++++.-..-+....+..++||||++|++|.++..... .+.+.. ..+..++..++.|+|+.|
T Consensus 53 ----------l~~l-~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 53 ----------SKLF-NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred ----------HHhc-CCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 1111 12222211112233456789999999999988754322 223333 345567888999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHH-HHHHHHH-----HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEE-ARFAIIG-----HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~ 362 (464)
++|+|+||.||+++.++++++.|||....+... ....... ......+..||.+... ....+.++|+||+|+
T Consensus 122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~~~DiwslG~ 198 (327)
T cd08227 122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQN---LQGYDAKSDIYSVGI 198 (327)
T ss_pred EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcc---cCCCCchhhHHHHHH
Confidence 999999999999999999999999865443211 1000000 0001112334433211 122467899999999
Q ss_pred HHHHHHHHhccCCCCcCc
Q 012411 363 ALRNFFDDALNSSVSELN 380 (464)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~ 380 (464)
.+++++++ ..|+...+
T Consensus 199 il~el~~g--~~pf~~~~ 214 (327)
T cd08227 199 TACELANG--HVPFKDMP 214 (327)
T ss_pred HHHHHHHC--CCCCCCcc
Confidence 99999984 34554443
No 228
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.85 E-value=1.4e-21 Score=187.76 Aligned_cols=198 Identities=16% Similarity=0.167 Sum_probs=123.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|++. ++..||||+.++..... + +|..
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~valK~~~~~~~~~----------------------------------~------~~~~ 50 (262)
T cd05071 12 VKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSP----------------------------------E------AFLQ 50 (262)
T ss_pred eecCCCCCCcEEEEEec-CCceEEEEecccCccCH----------------------------------H------HHHH
Confidence 67999999999999987 55679999987431110 0 0122
Q ss_pred HHHHHHHHHHHhCCCCCE-EeceeeccCCCCceEEEeeecCcccCcHHHHHhc-CCC--HHHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLK--VLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~--~~~~~~~~i~~~l~~lh~~gi 289 (464)
|...+.++ . ++++ .+...+ .....++||||++|++|.+....... ..+ ....+..++..++.++|+.|+
T Consensus 51 E~~~l~~l----~-~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 123 (262)
T cd05071 51 EAQVMKKL----R-HEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123 (262)
T ss_pred HHHHHHhC----C-CCCcceEEEEE--CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 22222222 1 1221 111111 12456899999999999887543211 122 333445677789999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|+||+||+++.++.++|+|||.+..+.........+......+..|| ....+..+...|+|++|+.++++++
T Consensus 124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE-----~~~~~~~~~~~DvwslG~~l~ellt 198 (262)
T cd05071 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE-----AALYGRFTIKSDVWSFGILLTELTT 198 (262)
T ss_pred cccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHh-----HhccCCCCchhhHHHHHHHHHHHHc
Confidence 99999999999999999999999999876543211111111111233344 3334445778999999999999987
Q ss_pred HhccCCCCcCcHHHHH
Q 012411 370 DALNSSVSELNFKTIV 385 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~ 385 (464)
. ...++.......+.
T Consensus 199 ~-g~~p~~~~~~~~~~ 213 (262)
T cd05071 199 K-GRVPYPGMVNREVL 213 (262)
T ss_pred C-CCCCCCCCChHHHH
Confidence 2 12344444433333
No 229
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.85 E-value=5.5e-21 Score=182.65 Aligned_cols=201 Identities=14% Similarity=0.144 Sum_probs=125.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.++ ++..+|+|....+.... + +|..
T Consensus 10 ~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~----------------------------------~------~~~~ 48 (256)
T cd05114 10 KELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSE----------------------------------E------DFIE 48 (256)
T ss_pred eEecCCcCceEEEEEec-cCceEEEEecccCCccH----------------------------------H------HHHH
Confidence 67999999999999987 77789999876431110 0 1111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
|+..+.++ +++++.-..-+.......++||||++|++|.+.........+.. ..+..++..++.++|+.|++|
T Consensus 49 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 123 (256)
T cd05114 49 EAKVMMKL-----SHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIH 123 (256)
T ss_pred HHHHHHHC-----CCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 22222221 11222211112233456789999999999987644322223333 344466778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.++.++++|||.+..+.........+......+..||. ......+.++|+|++|+.++++++.
T Consensus 124 ~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~-----~~~~~~~~~~Di~s~G~~l~el~~~- 197 (256)
T cd05114 124 RDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEV-----FNFSKYSSKSDVWSFGVLMWEVFTE- 197 (256)
T ss_pred cccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhh-----cccCccchhhhhHHHHHHHHHHHcC-
Confidence 9999999999999999999999988654321111011111112333443 3333346789999999999999872
Q ss_pred ccCCCCcCcHHHHHH
Q 012411 372 LNSSVSELNFKTIVD 386 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~ 386 (464)
...|+...+..+...
T Consensus 198 g~~p~~~~~~~~~~~ 212 (256)
T cd05114 198 GKMPFEKKSNYEVVE 212 (256)
T ss_pred CCCCCCCCCHHHHHH
Confidence 234555544433333
No 230
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.85 E-value=2.9e-21 Score=187.37 Aligned_cols=184 Identities=20% Similarity=0.269 Sum_probs=121.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|++..+|+.||+|..+..... .+..++.+++ ...|++++.+.+.+..
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~----------~l~h~~i~~~~~~~~~----- 70 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLK----------ELKHKNIVRLYDVLHS----- 70 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHH----------hcCCCCeeeHHHHhcc-----
Confidence 6799999999999999889999999998643211 1112222222 2236666665554321
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (464)
.+..+++|||++| +|.+.........+ ....+..++..++.++|+
T Consensus 71 --------------------------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~ 117 (284)
T cd07839 71 --------------------------------DKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS 117 (284)
T ss_pred --------------------------------CCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456799999986 55554322222233 334556778889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
.|++|+|+||+||+++.++.++|+|||++..+...... .........+..||.+.. ....+.+.|+|++|+.+++
T Consensus 118 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~il~~ 192 (284)
T cd07839 118 HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFG----AKLYSTSIDMWSAGCIFAE 192 (284)
T ss_pred CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC-cCCCccccCCcChHHHhC----CcccCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999998765432110 000011122334443321 1234678999999999999
Q ss_pred HHHH
Q 012411 367 FFDD 370 (464)
Q Consensus 367 ~~~~ 370 (464)
++++
T Consensus 193 l~tg 196 (284)
T cd07839 193 LANA 196 (284)
T ss_pred HHhc
Confidence 9984
No 231
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.85 E-value=3.7e-21 Score=186.44 Aligned_cols=191 Identities=16% Similarity=0.105 Sum_probs=117.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|+||.||+|.++.+|+.||||+.+....... ....+. |
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~------------------------------e----- 49 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE--QKRLLM------------------------------D----- 49 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH--HHHHHH------------------------------H-----
Confidence 679999999999999998999999999875432110 001111 1
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH---HhcCCCHH--HHHHHHHHHHHHHHHHC-
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI---ESQGLKVL--DLVNTGIQCSLRQLLEY- 287 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~---~~~~~~~~--~~~~~~i~~~l~~lh~~- 287 (464)
.... .+. .+++++.-..-+....+..+++|||++| +|.+.... .....+.. ..+..++..++.++|++
T Consensus 50 -~~~~---~~~-~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 123 (283)
T cd06617 50 -LDIS---MRS-VDCPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL 123 (283)
T ss_pred -HHHH---HHH-cCCCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 1100 011 1222221111111234567899999986 55554321 11223333 34557788899999997
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
|++|+|+||+||+++.++.++|+|||++..+....... ..+ ...+..||....... ....+.++|+|++|+.+++
T Consensus 124 ~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~y~aPE~~~~~~~-~~~~~~~~Di~slG~~l~~ 199 (283)
T cd06617 124 SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAG---CKPYMAPERINPELN-QKGYDVKSDVWSLGITMIE 199 (283)
T ss_pred CeecCCCCHHHEEECCCCCEEEeecccccccccccccccccC---CccccChhhcCCccc-ccccCccccchhhHHHHHH
Confidence 99999999999999999999999999988764321110 111 112223443211100 0123678999999999999
Q ss_pred HHHHh
Q 012411 367 FFDDA 371 (464)
Q Consensus 367 ~~~~~ 371 (464)
++++.
T Consensus 200 l~~g~ 204 (283)
T cd06617 200 LATGR 204 (283)
T ss_pred HHhCC
Confidence 99843
No 232
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.85 E-value=3.2e-21 Score=184.13 Aligned_cols=195 Identities=16% Similarity=0.111 Sum_probs=125.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.. .|+.||||..+..... .+.+..|++.
T Consensus 12 ~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~----------------------------------~~~~~~e~~~-- 53 (256)
T cd05039 12 ATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTA----------------------------------AQAFLAEASV-- 53 (256)
T ss_pred eeeecCCCceEEEEEe--cCcEEEEEEeccchhH----------------------------------HHHHHHHHHH--
Confidence 6799999999999997 5899999998644220 0111112211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
+.++ . ++++.-..-+....+..++||||++|++|.+...... ........+..++..++.++|..|++
T Consensus 54 ----l~~l----~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~ 124 (256)
T cd05039 54 ----MTTL----R-HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFV 124 (256)
T ss_pred ----HHhc----C-CcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 1111 1 1222111111222567799999999999988754332 12233344557788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||+++.+|.++|+|||.+......... ......+..|| ....+..+.+.|+|++|+.++++++
T Consensus 125 H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~----~~~~~~~~ape-----~~~~~~~~~~~Di~slG~il~~l~~- 194 (256)
T cd05039 125 HRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDS----GKLPVKWTAPE-----ALREKKFSTKSDVWSFGILLWEIYS- 194 (256)
T ss_pred chhcccceEEEeCCCCEEEccccccccccccccc----CCCcccccCch-----hhcCCcCCcHHHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999877433211 00011122333 3334555778999999999999986
Q ss_pred hccCCCCcCcHHHHH
Q 012411 371 ALNSSVSELNFKTIV 385 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~ 385 (464)
....++...+...+.
T Consensus 195 ~g~~p~~~~~~~~~~ 209 (256)
T cd05039 195 FGRVPYPRIPLKDVV 209 (256)
T ss_pred cCCCCCCCCCHHHHH
Confidence 123345444444433
No 233
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.85 E-value=1.1e-20 Score=180.85 Aligned_cols=195 Identities=14% Similarity=0.154 Sum_probs=124.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|... ++..||+|...+..... +. +..
T Consensus 12 ~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~----------------------------------~~------~~~ 50 (261)
T cd05072 12 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSV----------------------------------QA------FLE 50 (261)
T ss_pred eecCCcCCceEEEEEec-CCceEEEEEccCCchhH----------------------------------HH------HHH
Confidence 67999999999999986 78889999876542110 01 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHH--HHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLD--LVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~--~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++ +++++.-...+.......+++|||++|++|.+...... ....... .+..++..++.|+|+.|++
T Consensus 51 e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~ 125 (261)
T cd05072 51 EANLMKTL-----QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125 (261)
T ss_pred HHHHHHhC-----CCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 22222211 12232222222233456789999999999988754322 2233322 3446778899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|++|+||+++.++.++|+|||++..+.............. ...++++....+..+++.|+|++|+.++++++.
T Consensus 126 H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~-----~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~ 200 (261)
T cd05072 126 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-----IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTY 200 (261)
T ss_pred ccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccc-----eecCCHHHhccCCCChhhhhhhhHHHHHHHHcc
Confidence 999999999999999999999999987654321110110011 122333344455567789999999999999962
Q ss_pred hccCCCCcCc
Q 012411 371 ALNSSVSELN 380 (464)
Q Consensus 371 ~~~~~~~~~~ 380 (464)
...|+....
T Consensus 201 -g~~p~~~~~ 209 (261)
T cd05072 201 -GKIPYPGMS 209 (261)
T ss_pred -CCCCCCCCC
Confidence 223444443
No 234
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.85 E-value=1e-21 Score=190.58 Aligned_cols=126 Identities=21% Similarity=0.185 Sum_probs=88.0
Q ss_pred CceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHH
Q 012411 243 GKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA 322 (464)
Q Consensus 243 ~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~ 322 (464)
..+++|||++|++|.+..............+..++..++.++|+.|++|+|+||+||++++++.++|+|||++..+....
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 161 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 161 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence 46899999999999887543322223333455677789999999999999999999999999999999999988765432
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 323 RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
...... .........++++....+..+.++|+|++|+.+++++++.
T Consensus 162 ~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~ 207 (283)
T cd05080 162 EYYRVR---EDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHC 207 (283)
T ss_pred hhhccC---CCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCC
Confidence 110000 0000011122333333445678899999999999999854
No 235
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.85 E-value=2.4e-21 Score=183.41 Aligned_cols=192 Identities=21% Similarity=0.267 Sum_probs=128.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|++|.||+|.+..+|+.|++|+.+....+.. ..+ ..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------------------------~~~------~~ 46 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK---------------------------------EKI------IN 46 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHH---------------------------------HHH------HH
Confidence 689999999999999987899999999875532100 011 11
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++. ++++....-........+++|||++|++|.+.........+.. ..+..++..++.++|..|++|
T Consensus 47 e~~~l~~l~-----~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h 121 (253)
T cd05122 47 EIQILKKCK-----HPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121 (253)
T ss_pred HHHHHHhCC-----CCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEec
Confidence 111111111 2222222212222356789999999999988754432233333 344566778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+|++|+||++++++.++|+|||.+........ .... +....++++....+..+.+.|+|++|+.+++++++
T Consensus 122 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~--------~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g 193 (253)
T cd05122 122 RDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV--------GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEG 193 (253)
T ss_pred CCCCHHHEEEccCCeEEEeecccccccccccccccee--------cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhC
Confidence 99999999999999999999999988765431 1111 12223334444444567889999999999999984
Q ss_pred hccCCCCcC
Q 012411 371 ALNSSVSEL 379 (464)
Q Consensus 371 ~~~~~~~~~ 379 (464)
..++...
T Consensus 194 --~~p~~~~ 200 (253)
T cd05122 194 --KPPYSEL 200 (253)
T ss_pred --CCCCCCC
Confidence 3454444
No 236
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.85 E-value=3.2e-21 Score=184.50 Aligned_cols=187 Identities=18% Similarity=0.171 Sum_probs=124.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|++..+|+.|+||+.......... .. +..
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~--------------------------------~~------~~~ 48 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFR--------------------------------KQ------LLR 48 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHH--------------------------------HH------HHH
Confidence 7899999999999999988999999998755321000 00 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH-CCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE-YGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~-~gi~ 290 (464)
|...+.++. ++++.-..-+.......+++|||++|++|.+..... ...+.. ..+..++..++.++|+ .|++
T Consensus 49 e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~ 122 (264)
T cd06623 49 ELKTLRSCE-----SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHII 122 (264)
T ss_pred HHHHHHhcC-----CCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 222222221 122111111122335678999999999998875432 233333 3445677789999999 9999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|++|+||+++.++.++|+|||++..+....... ....+....++++....+..+.+.|+|++|+.+++++++
T Consensus 123 H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg 196 (264)
T cd06623 123 HRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC------NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALG 196 (264)
T ss_pred cCCCCHHHEEECCCCCEEEccCccceecccCCCcc------cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999988764432110 000112222333444445567789999999999999984
No 237
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.85 E-value=2.6e-21 Score=187.56 Aligned_cols=200 Identities=19% Similarity=0.203 Sum_probs=123.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH--HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE--AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~--~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.+|+|+||+||+|.+..+|+.||+|+....... .+..++.+++.+ ..|+|++.+.+.+...
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~---------~~h~~i~~~~~~~~~~------- 85 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKY---------SHHRNIATYYGAFIKK------- 85 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHh---------cCCCcEEEEeeehhcc-------
Confidence 6799999999999999888999999998543211 111111111110 0133333322211100
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCC
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~g 288 (464)
.........+++|||++|++|.+...... ...+.. ..+..++..++.|+|+.|
T Consensus 86 ------------------------~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ 141 (282)
T cd06636 86 ------------------------SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK 141 (282)
T ss_pred ------------------------cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 00011234589999999999988754322 223332 334567888999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
++|+|+||+||+++.++.++|+|||++........ ....++ ..+..||.+...-......+.++|+|++|+.+++
T Consensus 142 ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~---~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~e 218 (282)
T cd06636 142 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGT---PYWMAPEVIACDENPDATYDYRSDIWSLGITAIE 218 (282)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCccccc---ccccCHhhcCcccCcCcCCCcccchhHHHHHHHH
Confidence 99999999999999999999999999876532211 111111 2233344332110001223567999999999999
Q ss_pred HHHHhccCCCCc
Q 012411 367 FFDDALNSSVSE 378 (464)
Q Consensus 367 ~~~~~~~~~~~~ 378 (464)
++++ ..|+..
T Consensus 219 l~~g--~~p~~~ 228 (282)
T cd06636 219 MAEG--APPLCD 228 (282)
T ss_pred HHhC--CCCccc
Confidence 9984 344433
No 238
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.85 E-value=2.5e-21 Score=187.96 Aligned_cols=189 Identities=19% Similarity=0.247 Sum_probs=120.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChH--HHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE--EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~--~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.||+|++|.||+|.+..+|+.||+|+..+... ..+..+..+++.+. .|+|++.+++
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~---------~h~~i~~~~~------------ 82 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS---------DHPNVVKFYG------------ 82 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh---------cCCCeeeeee------------
Confidence 689999999999999988899999998764311 11111111111110 1222222211
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeec----cCCCCceEEEeeecCcccCcHHHHH---hcCCCH--HHHHHHHHHHHHH
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFW----DYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKV--LDLVNTGIQCSLR 282 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~----~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~--~~~~~~~i~~~l~ 282 (464)
.+. ......+++|||++|++|.+..... ....+. ...+..++..++.
T Consensus 83 ------------------------~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ 138 (286)
T cd06638 83 ------------------------MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ 138 (286)
T ss_pred ------------------------eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence 111 1123468999999999998764321 111222 2334567778999
Q ss_pred HHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 012411 283 QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl 360 (464)
++|+.|++|+|+||+||+++.++.++|+|||++..+..... ....+ ...+..||.+.......+..+.+.|+|++
T Consensus 139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~---~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 215 (286)
T cd06638 139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVG---TPFWMAPEVIACEQQLDSTYDARCDVWSL 215 (286)
T ss_pred HHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccC---CCcccChhhhchhhhccccccchhhhhhH
Confidence 99999999999999999999999999999999876643211 11111 12234455443221112334778999999
Q ss_pred HHHHHHHHHH
Q 012411 361 VPALRNFFDD 370 (464)
Q Consensus 361 ~~~l~~~~~~ 370 (464)
|+.+++++++
T Consensus 216 Gvi~~el~~g 225 (286)
T cd06638 216 GITAIELGDG 225 (286)
T ss_pred HHHHHHHhcC
Confidence 9999999884
No 239
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.85 E-value=8.2e-21 Score=189.90 Aligned_cols=271 Identities=18% Similarity=0.205 Sum_probs=156.3
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
..+||+|++|+||+|++..+|+.||||+......... ..-..++.+ ..+....|++++.+.+.+...
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~----~~l~~l~h~~iv~~~~~~~~~-------- 86 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAI-HAKRTYREL----RLLKHMDHENVIGLLDVFTPA-------- 86 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccchhh-HHHHHHHHH----HHHHhccCCCHHHHHHHhhcc--------
Confidence 3789999999999999988899999999865321110 001111111 112233477777666543221
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.. .......++||||+ |++|.+..............+..++..++.++|+.|++|+
T Consensus 87 ----------------~~-------~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~ 142 (343)
T cd07851 87 ----------------SS-------LEDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHR 142 (343)
T ss_pred ----------------cc-------ccccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 00 01113468999999 5577776433222333344555778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
|++|+||+++.+|.++|+|||++......... ..+ +..+..|+.+.. ....+.++|+|++|+.+++++++.
T Consensus 143 dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~~---~~~y~aPE~~~~----~~~~~~~~DvwslGv~l~elltg~- 213 (343)
T cd07851 143 DLKPSNIAVNEDCELKILDFGLARHTDDEMTG-YVA---TRWYRAPEIMLN----WMHYNQTVDIWSVGCIMAELLTGK- 213 (343)
T ss_pred CCCHHHeEECCCCCEEEccccccccccccccC-Ccc---cccccCHHHHhC----CCCCCchHhHHHHHHHHHHHHhCC-
Confidence 99999999999999999999999876543111 111 122334444321 113467899999999999999853
Q ss_pred cCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH---HHHHHhhcccCCCC-----ChHHhhhHHHHHHhcCCCCH
Q 012411 373 NSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL---TVLEGLALYADPNF-----KVLAASYPYFAKRLLTDPNP 444 (464)
Q Consensus 373 ~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l---~~leg~~~~ldP~~-----~~~~~~~p~~~~~l~~~~~p 444 (464)
.++...+.......+.... + ..|+.+..-...- ..+.++...-.+++ .....+..++.+++ .++|
T Consensus 214 -~pf~~~~~~~~~~~i~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l--~~~P 286 (343)
T cd07851 214 -TLFPGSDHIDQLKRIMNLV---G-TPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKML--VLDP 286 (343)
T ss_pred -CCCCCCChHHHHHHHHHhc---C-CCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhC--CCCh
Confidence 3444333222222222221 1 1122211100000 00111111111111 12345677776666 4678
Q ss_pred HHHHHHHHHhcc
Q 012411 445 YLRDALVELLFK 456 (464)
Q Consensus 445 ~~r~~~~~~l~~ 456 (464)
..||++.+++..
T Consensus 287 ~~Rpt~~ell~h 298 (343)
T cd07851 287 DKRITAAEALAH 298 (343)
T ss_pred hhCCCHHHHhcC
Confidence 889999988754
No 240
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.85 E-value=6.1e-21 Score=190.86 Aligned_cols=93 Identities=16% Similarity=0.185 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCC
Q 012411 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLS 352 (464)
Q Consensus 273 ~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (464)
+..++..++.|+|+.|++|+|+||.||+++.++.++|+|||++..+.........+. ....+..++++....+..+
T Consensus 184 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~ 259 (343)
T cd05103 184 YSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPETIFDRVYT 259 (343)
T ss_pred HHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC----CCCCcceECcHHhcCCCCC
Confidence 345777899999999999999999999999999999999999886533211100000 0111223333333344557
Q ss_pred CCCCcchHHHHHHHHHH
Q 012411 353 PDVDVTPIVPALRNFFD 369 (464)
Q Consensus 353 ~~~D~~sl~~~l~~~~~ 369 (464)
.+.|+|++|+.++++++
T Consensus 260 ~~~Di~slG~~l~el~~ 276 (343)
T cd05103 260 IQSDVWSFGVLLWEIFS 276 (343)
T ss_pred chhhHHHHHHHHHHHHH
Confidence 78999999999999986
No 241
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.85 E-value=1.1e-21 Score=175.67 Aligned_cols=224 Identities=15% Similarity=0.206 Sum_probs=157.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..+|.|.++.|+.|..-.+.++++||+++|-....+.+++.+|+.+. .++|++.+++...+.
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~---------gg~NIi~L~DiV~Dp--------- 105 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLR---------GGPNIIKLLDIVKDP--------- 105 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhcc---------CCCCeeehhhhhcCc---------
Confidence 57999999999999987689999999999998888999998888765 378988888865432
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
.|....|+.||+++.+...+ .........+.+..++..||.|||+.||+|||
T Consensus 106 --------------------------~SktpaLiFE~v~n~Dfk~l--y~tl~d~dIryY~~elLkALdyCHS~GImHRD 157 (338)
T KOG0668|consen 106 --------------------------ESKTPSLIFEYVNNTDFKQL--YPTLTDYDIRYYIYELLKALDYCHSMGIMHRD 157 (338)
T ss_pred --------------------------cccCchhHhhhhccccHHHH--hhhhchhhHHHHHHHHHHHHhHHHhcCccccc
Confidence 23444589999988665443 12222233456778888999999999999999
Q ss_pred CCCcceEEccC-CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 294 PHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 294 lkp~Nili~~~-g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
+||.|+||+.. -+++|+|||++....+..-.+. -+.+.....||.+.. .-..+-..|+||+||.+..|+..--
T Consensus 158 VKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV--RVASRyfKGPELLVd----y~~YDYSLD~WS~GcmlA~miFrke 231 (338)
T KOG0668|consen 158 VKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV--RVASRYFKGPELLVD----YQMYDYSLDMWSLGCMLASMIFRKE 231 (338)
T ss_pred CCcceeeechhhceeeeeecchHhhcCCCceeee--eeehhhcCCchheee----chhccccHHHHHHHHHHHHHHhccC
Confidence 99999999965 5699999999987655432111 112233445555432 2223667899999999999986322
Q ss_pred cCCCCcCcHHHHH--------HHHHHHHhhCCCCCChHHHHHHHH
Q 012411 373 NSSVSELNFKTIV--------DGLGAVLYQYPFNVPAYYALILRS 409 (464)
Q Consensus 373 ~~~~~~~~~~~~~--------~~l~~~~~~~~~~~p~~~~~l~r~ 409 (464)
+.--+..+..+++ +++...+.++.+.++|.+..++..
T Consensus 232 pFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~ 276 (338)
T KOG0668|consen 232 PFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGR 276 (338)
T ss_pred cccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhc
Confidence 2111223333322 234455667888899888776543
No 242
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.85 E-value=5.1e-21 Score=187.30 Aligned_cols=137 Identities=12% Similarity=0.076 Sum_probs=91.7
Q ss_pred CCceEEEeeecCcccCcHHHHHh---------------cCCC--HHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIES---------------QGLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE 304 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~--~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~ 304 (464)
...+++|||+++++|.+...... .... ....+..++..+++++|+.|++|+|+||+||+++.+
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 76 GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN 155 (297)
T ss_pred CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC
Confidence 45689999999999988753211 0122 223455677889999999999999999999999999
Q ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHH
Q 012411 305 GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTI 384 (464)
Q Consensus 305 g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~ 384 (464)
+.++|+|||++.............. ...+..|| ....+..+.++|+||+|+.++++++. ...|+...+...+
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~--~~~y~aPE-----~~~~~~~~~~~DvwSlG~il~el~t~-g~~pf~~~~~~~~ 227 (297)
T cd05089 156 LASKIADFGLSRGEEVYVKKTMGRL--PVRWMAIE-----SLNYSVYTTKSDVWSFGVLLWEIVSL-GGTPYCGMTCAEL 227 (297)
T ss_pred CeEEECCcCCCccccceeccCCCCc--CccccCch-----hhccCCCCchhhHHHHHHHHHHHHcC-CCCCCCCCCHHHH
Confidence 9999999999865332111100000 01122333 33344457789999999999999861 3345555555444
Q ss_pred HH
Q 012411 385 VD 386 (464)
Q Consensus 385 ~~ 386 (464)
..
T Consensus 228 ~~ 229 (297)
T cd05089 228 YE 229 (297)
T ss_pred HH
Confidence 43
No 243
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.85 E-value=1.5e-21 Score=187.55 Aligned_cols=188 Identities=20% Similarity=0.198 Sum_probs=120.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|.+..+++.||+|+.+....... ..+. .....+....|+++..+.+
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~~~~---~e~~~~~~l~h~~ii~~~~-------------- 73 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF----AVVQ---QEIIMMKDCKHSNIVAYFG-------------- 73 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH----HHHH---HHHHHHHhCCCCCeeeEEE--------------
Confidence 679999999999999988899999999875422211 0000 0000001111222222211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
+.......+++|||++|++|.+...... ........+..++..++.++|+.|++|+
T Consensus 74 -----------------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 130 (267)
T cd06645 74 -----------------------SYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHR 130 (267)
T ss_pred -----------------------EEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 1122345689999999999988643221 1222334455677889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+||+||+++.++.++|+|||++..+..... ....++ ..+..||.+.. ...+..+.++|+||+|+.+++++++
T Consensus 131 dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~---~~y~aPE~~~~--~~~~~~~~~~DvwSlG~il~~l~~~ 205 (267)
T cd06645 131 DIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGT---PYWMAPEVAAV--ERKGGYNQLCDIWAVGITAIELAEL 205 (267)
T ss_pred CCCHHHEEECCCCCEEECcceeeeEccCcccccccccCc---ccccChhhhcc--ccCCCCCchhhhHHHHHHHHHHhcC
Confidence 9999999999999999999999876543211 111121 12223443211 0133457789999999999999874
No 244
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=3.3e-22 Score=181.23 Aligned_cols=215 Identities=19% Similarity=0.234 Sum_probs=143.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecC-----ChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRP-----GIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p-----~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
..||+|.||.|++|+.+.+|+.||+|+.-- +.....-..+++|. .+.|.|++.+++-++..
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~----------~lkHenv~nliEic~tk---- 88 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQ----------LLKHENVVNLIEICRTK---- 88 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHH----------HhcchhHHHHHHHHhhc----
Confidence 569999999999999998999999997532 22211122222222 23477777777765432
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH--hcCCCHHHHHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE--SQGLKVLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lh~ 286 (464)
+. |. -.+....+||+.+|+. +|..+.... +......+.++.++..+|.|+|+
T Consensus 89 -----------------~T------p~--~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr 142 (376)
T KOG0669|consen 89 -----------------AT------PT--NRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR 142 (376)
T ss_pred -----------------cC------Cc--ccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 10 00 0122456899999986 444432222 22334455677788899999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHH---HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA---RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
..++|||+||.|+||+.+|.++|+|||+++.++... ...+++-+.++.++.||.+..+- -.++++|+|..||.
T Consensus 143 ~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r----~yg~~iDiWgAgCi 218 (376)
T KOG0669|consen 143 NKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDR----EYGPPIDIWGAGCI 218 (376)
T ss_pred hhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhccc----ccCCcchhHhHHHH
Confidence 999999999999999999999999999998764332 22255556677888888774321 24789999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHHHHHHHHHHhh
Q 012411 364 LRNFFDDALNSSVSELNFKTIVDGLGAVLYQ 394 (464)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 394 (464)
+.+|+++ ++-.++-+...-+..|..++-.
T Consensus 219 maeMwtr--spimqgnteqqql~~Is~LcGs 247 (376)
T KOG0669|consen 219 MAEMWTR--SPIMQGNTEQQQLHLISQLCGS 247 (376)
T ss_pred HHHHHcc--CccccCChHHHHHHHHHHHhcc
Confidence 9999983 2333333333334444444433
No 245
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.85 E-value=1.2e-21 Score=190.17 Aligned_cols=188 Identities=19% Similarity=0.247 Sum_probs=118.6
Q ss_pred cccccceecEEEEEEE----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQL----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~----~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|+||.||+|.. ..+|+.||||.......... +.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~-------~~------------------------------- 51 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL-------RD------------------------------- 51 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH-------HH-------------------------------
Confidence 6799999999999984 34688999999865432211 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEE-eceeec-cCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVL-VPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLL 285 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~-vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh 285 (464)
+..|...+.++ +++++. +..+.. ......++||||++|++|.+.........+ ....+..++..++.++|
T Consensus 52 -~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH 125 (284)
T cd05081 52 -FEREIEILKSL-----QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG 125 (284)
T ss_pred -HHHHHHHHHhC-----CCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 11111111111 112211 111111 112346899999999999887543222233 33345567888999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHH--HHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHV--VHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
+.|++|+|+||+||+++++++++|+|||++..+............ ....+..|| ....+..+.++|+|++|+.
T Consensus 126 ~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~~ 200 (284)
T cd05081 126 SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPE-----SLTESKFSVASDVWSFGVV 200 (284)
T ss_pred HCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHH-----HhccCCcChHHHHHHHHHH
Confidence 999999999999999999999999999999876443211000000 001122344 3333445778999999999
Q ss_pred HHHHHHH
Q 012411 364 LRNFFDD 370 (464)
Q Consensus 364 l~~~~~~ 370 (464)
++++++.
T Consensus 201 l~el~~~ 207 (284)
T cd05081 201 LYELFTY 207 (284)
T ss_pred HHHHhhc
Confidence 9999873
No 246
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.85 E-value=2.4e-21 Score=186.26 Aligned_cols=191 Identities=17% Similarity=0.236 Sum_probs=121.2
Q ss_pred CcccccceecEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
.+.||+|++|+||+|++..+|+ .||||..+.+.......
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~-------------------------------------- 51 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQ-------------------------------------- 51 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHH--------------------------------------
Confidence 3789999999999999875554 79999987552211000
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHC
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~ 287 (464)
++..|+..+.++ . ++++.-..-+.......++||||++|++|.+.........+.. ..+..++..++.++|+.
T Consensus 52 ~~~~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~ 126 (268)
T cd05063 52 DFLSEASIMGQF----S-HHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM 126 (268)
T ss_pred HHHHHHHHHhcC----C-CCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 011122211111 1 1222111112222356789999999999988754322223333 33456677899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|++|+|+||+||+++.++.++++|||++............... ....+..++++....+..+.+.|+|++|+.++++
T Consensus 127 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~---~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~el 203 (268)
T cd05063 127 NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSG---GKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEV 203 (268)
T ss_pred CeeccccchhhEEEcCCCcEEECCCccceecccccccceeccC---CCcCceecCHHHhhcCCcChHhHHHHHHHHHHHH
Confidence 9999999999999999999999999998876433221111100 0001122334444445557889999999999998
Q ss_pred HH
Q 012411 368 FD 369 (464)
Q Consensus 368 ~~ 369 (464)
++
T Consensus 204 l~ 205 (268)
T cd05063 204 MS 205 (268)
T ss_pred Hh
Confidence 86
No 247
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.85 E-value=1e-20 Score=189.40 Aligned_cols=193 Identities=21% Similarity=0.241 Sum_probs=122.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|+||.||+|.+..+|+.||||++......... .....+ .+..+....|+|++.+.+.+..
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~----Ei~~l~~l~h~~iv~~~~~~~~---------- 87 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-AKRTYR----ELRLLKHMKHENVIGLLDVFTP---------- 87 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH-HHHHHH----HHHHHHHcCCCcccceeeeeee----------
Confidence 7899999999999998879999999998754221110 001111 1111122235555444332210
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
..........+++++++ |++|.+.........+....+..++..++.++|+.|++|+|
T Consensus 88 ---------------------~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~d 145 (345)
T cd07877 88 ---------------------ARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 145 (345)
T ss_pred ---------------------cccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 00001123457888887 66777654332233333444567788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+||+||+++.+|.++|+|||++........ ...+ ...+..||.+. .....+.++|+|++|+.+++++++.
T Consensus 146 lkp~NIll~~~~~~kl~dfg~~~~~~~~~~-~~~~---~~~y~aPE~~~----~~~~~~~~~DvwslG~il~el~~g~ 215 (345)
T cd07877 146 LKPSNLAVNEDCELKILDFGLARHTDDEMT-GYVA---TRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLTGR 215 (345)
T ss_pred CChHHEEEcCCCCEEEeccccccccccccc-cccc---CCCccCHHHHh----CccCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999999999887543311 1111 12233444432 1123467899999999999999843
No 248
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.85 E-value=1.2e-21 Score=190.02 Aligned_cols=195 Identities=22% Similarity=0.196 Sum_probs=118.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|+...+|+.||||+++...... .....+.+|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-------------------------------~~~~~~~~e----- 49 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-------------------------------GVPSTAIRE----- 49 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccC-------------------------------CchHHHHHH-----
Confidence 67999999999999998889999999986431110 000001111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh--cCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
...+.++ . ++++.-..-+.......++||||++| +|.+...... ...+.. ..+..++..+|.|+|+.|+
T Consensus 50 -~~~l~~l----~-h~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 122 (285)
T cd07861 50 -ISLLKEL----Q-HPNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV 122 (285)
T ss_pred -HHHHHhc----C-CCCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 1111111 1 12211111111223567899999985 5655432211 223333 3346778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|+||+||+++.+|.++|+|||++......... .........+..||.+.. ....+.++|+|++|+.++++++
T Consensus 123 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~----~~~~~~~~Dv~slG~il~~l~t 197 (285)
T cd07861 123 LHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV-YTHEVVTLWYRAPEVLLG----SPRYSTPVDIWSIGTIFAEMAT 197 (285)
T ss_pred eecCCCHHHEEEcCCCcEEECcccceeecCCCccc-ccCCcccccccChHHhcC----CCCcCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998765322110 000011122333443311 1123667899999999999998
Q ss_pred HhccCCCCc
Q 012411 370 DALNSSVSE 378 (464)
Q Consensus 370 ~~~~~~~~~ 378 (464)
+ ..++..
T Consensus 198 g--~~~~~~ 204 (285)
T cd07861 198 K--KPLFHG 204 (285)
T ss_pred C--CCCCCC
Confidence 4 344443
No 249
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.85 E-value=4.2e-21 Score=186.90 Aligned_cols=188 Identities=21% Similarity=0.212 Sum_probs=121.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+..+++.||+|+.......... ..+...++.+....|+|++.+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~------~~~~~e~~~l~~l~h~~iv~~~~-------------- 66 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQ------KQILRELEINKSCKSPYIVKYYG-------------- 66 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHH------HHHHHHHHHHHhCCCCCeeeeee--------------
Confidence 6899999999999999878999999998644221100 00000111111112333322221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeecc-CCCCceEEEeeecCcccCcHHHHH---hcCCC--HHHHHHHHHHHHHHHHHHC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIE---SQGLK--VLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~--~~~~~~~~i~~~l~~lh~~ 287 (464)
.+.. ..+..++||||++|++|.+..... ..... ....+..++..++.|+|+.
T Consensus 67 ----------------------~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~ 124 (287)
T cd06621 67 ----------------------AFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR 124 (287)
T ss_pred ----------------------EEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2211 123568999999999998764321 11122 2334557788899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|++|+|++|+||+++.++.++|+|||++..+.........+ ...+..|| ....+..+.+.|+|++|+.++++
T Consensus 125 ~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~---~~~y~~pE-----~~~~~~~~~~~Dv~slG~il~~l 196 (287)
T cd06621 125 KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTG---TSFYMAPE-----RIQGKPYSITSDVWSLGLTLLEV 196 (287)
T ss_pred CcccCCCCHHHEEEecCCeEEEeeccccccccccccccccC---CccccCHH-----HhcCCCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999987654332111111 11222343 33334457789999999999999
Q ss_pred HHHh
Q 012411 368 FDDA 371 (464)
Q Consensus 368 ~~~~ 371 (464)
+++.
T Consensus 197 ~~g~ 200 (287)
T cd06621 197 AQNR 200 (287)
T ss_pred HhCC
Confidence 9854
No 250
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.85 E-value=4.3e-21 Score=182.84 Aligned_cols=201 Identities=18% Similarity=0.215 Sum_probs=126.7
Q ss_pred cccccceecEEEEEEEccCC----cEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLKYSG----QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g----~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||.|+||+||+|.+..++ ..||+|+.++...... .+.+..|+
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------------~~~~~~e~ 52 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ--------------------------------IEEFLREA 52 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHH--------------------------------HHHHHHHH
Confidence 67999999999999997655 8999999876532210 01111111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceee--ccCCCCceEEEeeecCcccCcHHHHHhcC-CCHH--HHHHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIF--WDYTSGKVLTMEWVEGVKLNEQVAIESQG-LKVL--DLVNTGIQCSLRQL 284 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~--~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-~~~~--~~~~~~i~~~l~~l 284 (464)
. .+.++ +++++ ++++ ....+..+++|||++|++|.+........ .+.. ..+..++..++.++
T Consensus 53 ~------~l~~l-----~~~~i--~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l 119 (258)
T smart00219 53 R------IMRKL-----DHPNI--VKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119 (258)
T ss_pred H------HHHhc-----CCCch--heEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 1 11111 11221 1222 12235678999999999998875433221 3333 34456777899999
Q ss_pred HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
|+.|++|+|++|+||+++.++.++|+|||++............. ....+..++++....+..+.+.|+|++|+.+
T Consensus 120 h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~-----~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~ 194 (258)
T smart00219 120 ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKG-----GKLPIRWMAPESLKDGKFTSKSDVWSFGVLL 194 (258)
T ss_pred hcCCeeecccccceEEEccCCeEEEcccCCceeccccccccccc-----CCCcccccChHHhccCCCCcchhHHHHHHHH
Confidence 99999999999999999999999999999998765431100000 0011222333333445568899999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHH
Q 012411 365 RNFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~ 385 (464)
++++.. ...++...+...+.
T Consensus 195 ~~l~~~-g~~p~~~~~~~~~~ 214 (258)
T smart00219 195 WEIFTL-GESPYPGMSNEEVL 214 (258)
T ss_pred HHHHhC-CCCCCCCCCHHHHH
Confidence 999862 12344444433333
No 251
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.84 E-value=4.9e-21 Score=183.96 Aligned_cols=191 Identities=13% Similarity=0.058 Sum_probs=120.9
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.||.|++|.||+|+...+|+.||||..++....... ...++.
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~------------------------------------~~~~~~ 50 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAK------------------------------------ARQDCV 50 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHH------------------------------------HHHHHH
Confidence 36799999999999999889999999987532110000 000111
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---cCCCHH--HHHHHHHHHHHHHHHHC
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVL--DLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~--~~~~~~i~~~l~~lh~~ 287 (464)
.|...+.++ +++++.-..-+.......+++|||++|++|.+...... ...+.. ..+..++..++.++|+.
T Consensus 51 ~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 125 (267)
T cd08228 51 KEIDLLKQL-----NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR 125 (267)
T ss_pred HHHHHHHhC-----CCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 121111111 11221111111112346689999999999987643211 113332 33456777899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|++|+|+||+||+++.++.++|+|||++..+....... ....+.+..++++.......+.+.|+|++|+.++++
T Consensus 126 ~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el 199 (267)
T cd08228 126 RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA------HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred CeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHH------hcCCCCccccChhhhccCCCCchhhHHHHHHHHHHH
Confidence 99999999999999999999999999988765432110 011122233334443333456789999999999999
Q ss_pred HHH
Q 012411 368 FDD 370 (464)
Q Consensus 368 ~~~ 370 (464)
+++
T Consensus 200 ~~g 202 (267)
T cd08228 200 AAL 202 (267)
T ss_pred hcC
Confidence 984
No 252
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.84 E-value=4.6e-21 Score=183.49 Aligned_cols=200 Identities=16% Similarity=0.105 Sum_probs=125.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+. +++.|++|+........... +...+..+....|+++..+++
T Consensus 12 ~~ig~g~~~~vy~~~~~-~~~~~~~k~~~~~~~~~~~~-------~~~e~~~l~~l~~~~i~~~~~-------------- 69 (261)
T cd05148 12 RKLGSGYFGEVWEGLWK-NRVRVAIKILKSDDLLKQQD-------FQKEVQALKRLRHKHLISLFA-------------- 69 (261)
T ss_pred hhhccCCCccEEEeEec-CCCcEEEEeccccchhhHHH-------HHHHHHHHhcCCCcchhheee--------------
Confidence 67999999999999998 59999999986542211000 000001111112333322221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
+.......+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 70 -----------------------~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~ 126 (261)
T cd05148 70 -----------------------VCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSI 126 (261)
T ss_pred -----------------------eEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 1122345689999999999988754321 123333 34456778899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|++|+||+++.++.++|+|||.+..+........ + ....+..++++....+..+.++|+|++|+.++++++.
T Consensus 127 h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~-~-----~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~ 200 (261)
T cd05148 127 HRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS-D-----KKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200 (261)
T ss_pred ccccCcceEEEcCCceEEEccccchhhcCCcccccc-C-----CCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcC
Confidence 999999999999999999999999987644321100 0 0011122333333445557789999999999999872
Q ss_pred hccCCCCcCcHHHHH
Q 012411 371 ALNSSVSELNFKTIV 385 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~ 385 (464)
...|+...+..+..
T Consensus 201 -g~~p~~~~~~~~~~ 214 (261)
T cd05148 201 -GQVPYPGMNNHEVY 214 (261)
T ss_pred -CCCCCCcCCHHHHH
Confidence 23455444433333
No 253
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.84 E-value=3.7e-22 Score=204.88 Aligned_cols=257 Identities=17% Similarity=0.250 Sum_probs=178.0
Q ss_pred hhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHH
Q 012411 100 LQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLI 176 (464)
Q Consensus 100 l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~d~~~l 176 (464)
.+.-+.|+.+++-.+.+.+ +.+.++--+-.|+ +.||+|.||.|++|+++..|+ .||||.++.+..+.
T Consensus 603 ~k~YiDP~TYEDPnqAvre-FakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek-------- 672 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVRE-FAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK-------- 672 (996)
T ss_pred ceeecCCccccCccHHHHH-hhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHH--------
Confidence 4445567766665554433 3333443344454 789999999999999987774 69999998774442
Q ss_pred HHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCccc
Q 012411 177 RGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKL 256 (464)
Q Consensus 177 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L 256 (464)
+-.||+.||.-|-+| ++++|..-+-+---+.+..|++|||++|+|
T Consensus 673 ------------------------------qrrdFL~EAsIMGQF-----dHPNIIrLEGVVTks~PvMIiTEyMENGsL 717 (996)
T KOG0196|consen 673 ------------------------------QRRDFLSEASIMGQF-----DHPNIIRLEGVVTKSKPVMIITEYMENGSL 717 (996)
T ss_pred ------------------------------HHhhhhhhhhhcccC-----CCCcEEEEEEEEecCceeEEEhhhhhCCcH
Confidence 223566677665555 234443333333345677899999999999
Q ss_pred CcHHHHHhcCCCHHHHH--HHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHH---
Q 012411 257 NEQVAIESQGLKVLDLV--NTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV--- 331 (464)
Q Consensus 257 ~~~~~~~~~~~~~~~~~--~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~--- 331 (464)
+.+...+...+...+++ .++|.++++||-+.|++||||-..|||++.+-..|+.|||+++.+.++....+ .+..
T Consensus 718 DsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y-tt~GGKI 796 (996)
T KOG0196|consen 718 DSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY-TTLGGKI 796 (996)
T ss_pred HHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccc-cccCCcc
Confidence 99877665555555544 46788999999999999999999999999999999999999998855431111 1111
Q ss_pred HHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHHH
Q 012411 332 HMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALILR 408 (464)
Q Consensus 332 ~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~r 408 (464)
-+-+..||.+ .....+...|+||+|..|+|.++ |.+.|+-+++.++++.++....+ .-|+..|..+-.|+.
T Consensus 797 PiRWTAPEAI-----a~RKFTsASDVWSyGIVmWEVmS-yGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMl 868 (996)
T KOG0196|consen 797 PIRWTAPEAI-----AYRKFTSASDVWSYGIVMWEVMS-YGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLML 868 (996)
T ss_pred ceeecChhHh-----hhcccCchhhccccceEEEEecc-cCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHH
Confidence 1223345554 44455889999999999999987 67889999999999887765432 223445555544443
No 254
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.84 E-value=3e-21 Score=184.20 Aligned_cols=191 Identities=17% Similarity=0.188 Sum_probs=121.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||++.. +|+.||+|+.+..... ..+ ..
T Consensus 12 ~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~-----------------------------------~~~------~~ 48 (254)
T cd05083 12 EIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTA-----------------------------------QAF------LE 48 (254)
T ss_pred eeeccCCCCceEeccc--CCCceEEEeecCcchH-----------------------------------HHH------HH
Confidence 7899999999999975 7899999998643211 001 11
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc-CCCHHH--HHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKVLD--LVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~~~--~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.+ +.+..-+.+...+. ....+++|||++|++|.+....... ..+... .+..++..++.++|+.|++
T Consensus 49 e~~~l~~----~~~~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ 122 (254)
T cd05083 49 ETAVMTK----LHHKNLVRLLGVIL--HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLV 122 (254)
T ss_pred HHHHHHh----CCCCCcCeEEEEEc--CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 1111111 11111122222221 2446899999999999887543221 233332 3456777899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||+++.++.++|+|||++........ .......+..|| ....+..+.+.|+|++|+.++++++.
T Consensus 123 H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~y~~pe-----~~~~~~~~~~~Dv~slG~~l~el~~~ 193 (254)
T cd05083 123 HRDLAARNILVSEDGVAKVSDFGLARVGSMGVD----NSKLPVKWTAPE-----ALKHKKFSSKSDVWSYGVLLWEVFSY 193 (254)
T ss_pred ccccCcceEEEcCCCcEEECCCccceeccccCC----CCCCCceecCHH-----HhccCCcCchhhHHHHHHHHHHHHhC
Confidence 999999999999999999999999876432211 000011223344 33345567789999999999999861
Q ss_pred hccCCCCcCcHHH
Q 012411 371 ALNSSVSELNFKT 383 (464)
Q Consensus 371 ~~~~~~~~~~~~~ 383 (464)
...|+...+..+
T Consensus 194 -g~~p~~~~~~~~ 205 (254)
T cd05083 194 -GRAPYPKMSLKE 205 (254)
T ss_pred -CCCCCccCCHHH
Confidence 234444444433
No 255
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.84 E-value=5.1e-21 Score=186.21 Aligned_cols=187 Identities=20% Similarity=0.197 Sum_probs=120.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.|++|+..-..... . +.+.+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~------------------------------~~~~~------ 65 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR---R------------------------------ELLFN------ 65 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH---H------------------------------HHHHH------
Confidence 78999999999999988789999999875221110 0 00111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|...+..+ +++++..+.-+.......+++|||++|++|.+..............+..++..++.++|+.|++|+|
T Consensus 66 e~~~l~~~-----~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 140 (285)
T cd06648 66 EVVIMRDY-----QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140 (285)
T ss_pred HHHHHHHc-----CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 11111111 1222222222222345678999999999998875432222223334557778899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
++|.||+++.++.++|+|||++..+........ ...+.+..++++....+..+.+.|+|++|+.+++++++
T Consensus 141 l~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g 211 (285)
T cd06648 141 IKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRK------SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDG 211 (285)
T ss_pred CChhhEEEcCCCcEEEcccccchhhccCCcccc------cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhC
Confidence 999999999999999999998876543211100 00112223333333334457789999999999999984
No 256
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.84 E-value=4.2e-21 Score=188.43 Aligned_cols=139 Identities=14% Similarity=0.116 Sum_probs=91.8
Q ss_pred CCceEEEeeecCcccCcHHHHHhc---------------CCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQ---------------GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE 304 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~ 304 (464)
...+++|||+++++|.++...... ..+. ...+..++..++.|+|+.|++|+|+||+||+++.+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~ 173 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN 173 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC
Confidence 456899999999999887543211 1122 23345678889999999999999999999999999
Q ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHH
Q 012411 305 GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTI 384 (464)
Q Consensus 305 g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~ 384 (464)
+.++|+|||++..+.......... .....+..++++....+..+.++|+|++|+.++++++. ...++...+..++
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~-g~~p~~~~~~~~~ 248 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTT----NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL-GGSPYPGIPVEEL 248 (304)
T ss_pred CcEEECCCccceeccccccccccc----CCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcC-CCCCcccCCHHHH
Confidence 999999999998764322110000 00011122333333334457789999999999999862 2234444444443
Q ss_pred H
Q 012411 385 V 385 (464)
Q Consensus 385 ~ 385 (464)
.
T Consensus 249 ~ 249 (304)
T cd05101 249 F 249 (304)
T ss_pred H
Confidence 3
No 257
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.84 E-value=1.5e-20 Score=191.66 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHH-HHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 273 ~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
+..++..++.|+|+.|++|+|+||+|||++.++.++|+|||++..+......... .......+..|| ....+..
T Consensus 242 ~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~ 316 (400)
T cd05105 242 FTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE-----SIFDNLY 316 (400)
T ss_pred HHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChh-----hhcCCCC
Confidence 4466778999999999999999999999999999999999998865432211000 011111233344 3334456
Q ss_pred CCCCCcchHHHHHHHHHH
Q 012411 352 SPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~ 369 (464)
+.++|+|++|+.++++++
T Consensus 317 ~~~~DiwSlGvil~ellt 334 (400)
T cd05105 317 TTLSDVWSYGILLWEIFS 334 (400)
T ss_pred CchhhHHHHHHHHHHHHH
Confidence 788999999999999986
No 258
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.84 E-value=5.9e-21 Score=183.65 Aligned_cols=202 Identities=20% Similarity=0.188 Sum_probs=124.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH--HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE--AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~--~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
++||+|++|.||+|....+++.|++|+....... .+..++.+++.+. .|+++.++++.+..
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~---------~h~~i~~~~~~~~~-------- 74 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS---------NHPNIATFYGAFIK-------- 74 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc---------CCCChheEEEEEEe--------
Confidence 7899999999999999878999999998754221 1111111111110 12332222211100
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---cCCC--HHHHHHHHHHHHHHHHHH
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLK--VLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~--~~~~~~~~i~~~l~~lh~ 286 (464)
..........+++|||++|++|.+...... ...+ ....+..++..++.++|+
T Consensus 75 -----------------------~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~ 131 (275)
T cd06608 75 -----------------------KNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE 131 (275)
T ss_pred -----------------------cCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 000011234689999999999988754322 2233 333455678889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
.|++|+|++|.||+++.++.++|+|||++.......... ........+..||.+..........+.+.|+|++|+.+++
T Consensus 132 ~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~ 210 (275)
T cd06608 132 NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRR-NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIE 210 (275)
T ss_pred CCcccCCCCHHHEEEccCCeEEECCCccceecccchhhh-cCccccccccCHhHhcccccccCCccccccHHHhHHHHHH
Confidence 999999999999999999999999999987654332110 0001111233344332211111224567999999999999
Q ss_pred HHHHhccCCCCc
Q 012411 367 FFDDALNSSVSE 378 (464)
Q Consensus 367 ~~~~~~~~~~~~ 378 (464)
++++. .|+..
T Consensus 211 l~~g~--~p~~~ 220 (275)
T cd06608 211 LADGK--PPLCD 220 (275)
T ss_pred HHhCC--CCccc
Confidence 99843 44443
No 259
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.84 E-value=6.4e-21 Score=185.21 Aligned_cols=186 Identities=17% Similarity=0.201 Sum_probs=120.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|....+|+.||+|+......... .+.+.+|+..
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~--------------------------------~~~~~~E~~~-- 56 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSV--------------------------------RKQILRELQI-- 56 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchH--------------------------------HHHHHHHHHH--
Confidence 679999999999999988899999999864321111 0111111111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHH-CCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLE-YGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~gi~H 291 (464)
+..+ +++++.-..-+....+..++||||++|++|.+...... ...+....+..++..++.|+|+ .|++|
T Consensus 57 ----l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H 127 (284)
T cd06620 57 ----MHEC-----RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMH 127 (284)
T ss_pred ----HHHc-----CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 1111 11222211222223356789999999999987643211 1223334455667779999996 69999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+|++|+||+++.++.++|+|||++............+ +..+..||. ...+..+.++|+|++|+.+++++++
T Consensus 128 ~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~---~~~~~aPE~-----~~~~~~~~~~Di~slG~~l~~l~tg 198 (284)
T cd06620 128 RDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVG---TSTYMSPER-----IQGGKYTVKSDVWSLGISIIELALG 198 (284)
T ss_pred cCCCHHHEEECCCCcEEEccCCcccchhhhccCcccc---CcccCCHHH-----HccCCCCccchHHHHHHHHHHHHhC
Confidence 9999999999999999999999987653322111111 122233443 3334557789999999999999974
No 260
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.84 E-value=8.4e-21 Score=181.15 Aligned_cols=245 Identities=13% Similarity=0.089 Sum_probs=146.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||.++...+|+.||+|......... .. . ..+.+
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~--~~---~--------------------------~~~~~------ 48 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP--KE---R--------------------------EESRK------ 48 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh--HH---H--------------------------HHHHH------
Confidence 67999999999999998899999999875321000 00 0 00111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++ . ++++.-..-+....+..++||||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 49 e~~~l~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (256)
T cd08218 49 EVAVLSNM----K-HPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKIL 123 (256)
T ss_pred HHHHHHhC----C-CCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 11111111 1 1221111111223356789999999999987644321 123333 33456777899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|++|.||+++.++.++++|||++..+....... ....+.+..++++....+..+.+.|+|++|+.+++++++
T Consensus 124 h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g 197 (256)
T cd08218 124 HRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA------RTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTL 197 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh------hhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcC
Confidence 99999999999999999999999998765432111 011122223344444445557789999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHhhhHHHHHHhcCCCCHHHHHHH
Q 012411 371 ALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDAL 450 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~~ 450 (464)
..++...+..+....+. .......| .+.....+.++.+++ +.+|..||++
T Consensus 198 --~~~~~~~~~~~~~~~~~---~~~~~~~~-----------------------~~~~~~~~~li~~~l--~~~p~~Rp~~ 247 (256)
T cd08218 198 --KHAFEAGNMKNLVLKII---RGSYPPVS-----------------------SHYSYDLRNLVSQLF--KRNPRDRPSV 247 (256)
T ss_pred --CCCccCCCHHHHHHHHh---cCCCCCCc-----------------------ccCCHHHHHHHHHHh--hCChhhCcCH
Confidence 34444333333332221 11100011 112233445555544 4578889999
Q ss_pred HHHhcc
Q 012411 451 VELLFK 456 (464)
Q Consensus 451 ~~~l~~ 456 (464)
.++|..
T Consensus 248 ~~vl~~ 253 (256)
T cd08218 248 NSILEK 253 (256)
T ss_pred HHHhhC
Confidence 988864
No 261
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.84 E-value=1.4e-20 Score=182.79 Aligned_cols=190 Identities=17% Similarity=0.163 Sum_probs=119.8
Q ss_pred cccccceecEEEEEEE----ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQL----KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~----~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|+||.||+|.. ..++..||+|..++........ .
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~--------------------------------~----- 52 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--------------------------------D----- 52 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH--------------------------------H-----
Confidence 5699999999999984 3468899999987553221100 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccC-CCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~ 286 (464)
+.+|...+.++ .+..-+.+...+... ....++||||++|++|.++........+. ...+..++..++.++|+
T Consensus 53 -~~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~ 127 (284)
T cd05079 53 -LKKEIEILRNL----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS 127 (284)
T ss_pred -HHHHHHHHHhC----CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11122211111 111111222222221 23468999999999998875432222333 33445678889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
.|++|+|+||.||+++.++.++|+|||++..+...... .... ...+....++++....+..++++|+||+|+.++
T Consensus 128 ~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~----~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ 203 (284)
T cd05079 128 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKD----DLDSPVFWYAPECLIQSKFYIASDVWSFGVTLY 203 (284)
T ss_pred CCeeecccchheEEEcCCCCEEECCCccccccccCccceeecC----CCCCCccccCHHHhccCCCCccccchhhhhhhh
Confidence 99999999999999999999999999999876432110 0000 011111223333333445578899999999999
Q ss_pred HHHH
Q 012411 366 NFFD 369 (464)
Q Consensus 366 ~~~~ 369 (464)
++++
T Consensus 204 ellt 207 (284)
T cd05079 204 ELLT 207 (284)
T ss_pred hhhc
Confidence 9987
No 262
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.84 E-value=7.3e-21 Score=182.72 Aligned_cols=191 Identities=14% Similarity=0.051 Sum_probs=120.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.||||........ +......+...+..+....|+|+++++..+.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----------- 72 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM----DAKARADCIKEIDLLKQLNHPNVIKYYASFI----------- 72 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhh----hHHHHHHHHHHHHHHHHccCCchhhhhheeE-----------
Confidence 6799999999999998889999999977532110 0000011111111111222444443333211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---cCCCHHH--HHHHHHHHHHHHHHHCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLD--LVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~--~~~~~i~~~l~~lh~~g 288 (464)
.....+++|||++|++|.+...... ...+... .+..++..++.++|+.|
T Consensus 73 --------------------------~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08229 73 --------------------------EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR 126 (267)
T ss_pred --------------------------eCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 1245679999999999988654211 1233332 34456778999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++|+|+||.||+++.++.++|+|||++..+...... .........+..||. ......+.+.|+|++|+.+++++
T Consensus 127 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~ape~-----~~~~~~~~~~Dv~slG~il~~l~ 200 (267)
T cd08229 127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPER-----IHENGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred eecCCCCHHHEEEcCCCCEEECcchhhhccccCCcc-cccccCCcCccCHHH-----hcCCCccchhhHHHHHHHHHHHH
Confidence 999999999999999999999999998765432110 000011112233443 33334567899999999999999
Q ss_pred HHh
Q 012411 369 DDA 371 (464)
Q Consensus 369 ~~~ 371 (464)
++.
T Consensus 201 ~g~ 203 (267)
T cd08229 201 ALQ 203 (267)
T ss_pred hCC
Confidence 843
No 263
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.84 E-value=5.4e-21 Score=182.78 Aligned_cols=197 Identities=16% Similarity=0.112 Sum_probs=122.3
Q ss_pred ccccceecEEEEEEEccCC---cEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 135 PIAAASLGQVYKAQLKYSG---QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g---~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
.||+|++|+||+|.+..++ ..||+|..+....... .+. +
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~--------------------------------~~~------~ 43 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAG--------------------------------KKE------F 43 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHH--------------------------------HHH------H
Confidence 5899999999999875444 7899999875422100 011 1
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeec-cCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCc
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi 289 (464)
..|...+.++ +++++ .+++. ......+++|||++|++|.+...... ........+..++..++.++|..|+
T Consensus 44 ~~e~~~l~~l-----~h~~i--v~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i 116 (257)
T cd05060 44 LREASVMAQL-----DHPCI--VRLIGVCKGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF 116 (257)
T ss_pred HHHHHHHHhc-----CCCCe--eeEEEEEcCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 1122222111 11221 12221 12345689999999999988754322 2222333445677789999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|+||.||+++.++.++|+|||++..+....... ...... ......++++....+..+.++|+|++|+.++++++
T Consensus 117 ~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~-~~~~~~--~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~ 193 (257)
T cd05060 117 VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY-RATTAG--RWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193 (257)
T ss_pred eccCcccceEEEcCCCcEEeccccccceeecCCccc-ccccCc--cccccccCHHHhcCCCCCccchHHHHHHHHHHHHc
Confidence 999999999999999999999999988764332110 000000 00012233344445556888999999999999996
Q ss_pred HhccCCCCcCc
Q 012411 370 DALNSSVSELN 380 (464)
Q Consensus 370 ~~~~~~~~~~~ 380 (464)
. ...|+...+
T Consensus 194 ~-g~~p~~~~~ 203 (257)
T cd05060 194 Y-GAKPYGEMK 203 (257)
T ss_pred C-CCCCcccCC
Confidence 1 234554444
No 264
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.84 E-value=3.7e-21 Score=183.90 Aligned_cols=203 Identities=15% Similarity=0.123 Sum_probs=126.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|+|++|.||+|.+..+|+.||+|+.......... . ..+....+.+....|+++.++.+.+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~--~---~~~~~e~~~l~~l~~~~i~~~~~~~------------ 68 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKE--K---QQLVSEVNILRELKHPNIVRYYDRI------------ 68 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHH--H---HHHHHHHHHHHhcCCCccceeeeee------------
Confidence 6799999999999999889999999988643111100 0 0000000111111233322222110
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH---hcCCCHH--HHHHHHHHHHHHHHH---
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVL--DLVNTGIQCSLRQLL--- 285 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~--~~~~~~i~~~l~~lh--- 285 (464)
........+++|||++|++|.+..... ....+.. ..+..++..++.++|
T Consensus 69 -----------------------~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 125 (265)
T cd08217 69 -----------------------IDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRS 125 (265)
T ss_pred -----------------------ecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCc
Confidence 001123458999999999998875432 1223333 334567778999999
Q ss_pred --HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 286 --EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 286 --~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
+.|++|+|+||+||+++.++.++|+|||++..+...... .... .+.+..++++....+..+...|+|++|+.
T Consensus 126 ~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-~~~~-----~~~~~~~~pE~~~~~~~~~~~Dv~slG~i 199 (265)
T cd08217 126 DPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF-AKTY-----VGTPYYMSPEQLNHMSYDEKSDIWSLGCL 199 (265)
T ss_pred cccCcceecCCCHHHEEEecCCCEEEecccccccccCCccc-cccc-----ccCCCccChhhhcCCCCCchhHHHHHHHH
Confidence 999999999999999999999999999999877543210 0000 11222333334444445778999999999
Q ss_pred HHHHHHHhccCCCCcCcHHHH
Q 012411 364 LRNFFDDALNSSVSELNFKTI 384 (464)
Q Consensus 364 l~~~~~~~~~~~~~~~~~~~~ 384 (464)
+++++++ ..|+...+...+
T Consensus 200 l~~l~~g--~~p~~~~~~~~~ 218 (265)
T cd08217 200 IYELCAL--SPPFTARNQLQL 218 (265)
T ss_pred HHHHHHC--CCcccCcCHHHH
Confidence 9999984 345544443333
No 265
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.84 E-value=4.4e-21 Score=186.08 Aligned_cols=197 Identities=19% Similarity=0.187 Sum_probs=123.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|+++.+|+.||+|+........ . ..+. +..
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------~-------~~~~------~~~ 49 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP------------------------V-------IKKI------ALR 49 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCc------------------------c-------ccHH------HHH
Confidence 67999999999999998889999999875331100 0 0000 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ . ++++.-..-+.......+++|||++|+.+...... ....+. ...+..++..++.++|+.|++|
T Consensus 50 e~~~l~~~----~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H 123 (286)
T cd07847 50 EIRMLKQL----K-HPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHNCIH 123 (286)
T ss_pred HHHHHHhC----C-CCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 11111111 1 12211111112223456899999999887765322 122333 3445577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.+|.++|+|||++..+....... ........+..||.+.. ....+.+.|+|++|+.+++++++
T Consensus 124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~aPE~~~~----~~~~~~~~Di~slG~i~~~l~~g- 197 (286)
T cd07847 124 RDVKPENILITKQGQIKLCDFGFARILTGPGDDY-TDYVATRWYRAPELLVG----DTQYGPPVDVWAIGCVFAELLTG- 197 (286)
T ss_pred cCCChhhEEEcCCCcEEECccccceecCCCcccc-cCcccccccCCHHHHhC----CCCcCchhhhHHHHHHHHHHHhC-
Confidence 9999999999999999999999998765432100 00011122344554321 12346789999999999999984
Q ss_pred ccCCCCcCc
Q 012411 372 LNSSVSELN 380 (464)
Q Consensus 372 ~~~~~~~~~ 380 (464)
..++...+
T Consensus 198 -~~p~~~~~ 205 (286)
T cd07847 198 -QPLWPGKS 205 (286)
T ss_pred -CCCCCCCC
Confidence 34554443
No 266
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.84 E-value=2.4e-21 Score=188.08 Aligned_cols=187 Identities=17% Similarity=0.201 Sum_probs=117.6
Q ss_pred cccccceecEEEEEEEc----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLK----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~----~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|+||+||+|+.. .++..|++|..+....... ...
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~--------------------------------~~~----- 53 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ--------------------------------WGE----- 53 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH--------------------------------HHH-----
Confidence 67999999999999863 3567899999864321110 001
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhc----------------CCCHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQ----------------GLKVLD 271 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~----------------~~~~~~ 271 (464)
+.+|...+.++ +++++ ++++. ......+++|||+++++|.++...... ..+...
T Consensus 54 -~~~E~~~l~~l-----~h~ni--v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (283)
T cd05090 54 -FQQEASLMAEL-----HHPNI--VCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGD 125 (283)
T ss_pred -HHHHHHHHhhC-----CCCCe--eeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHH
Confidence 11222222222 12222 22222 223567899999999999887532211 122222
Q ss_pred --HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 012411 272 --LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (464)
Q Consensus 272 --~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (464)
.+..++..++.|+|+.|++|+|+||+||+++.++.++|+|||++..+........... .......++++....+
T Consensus 126 ~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~ 201 (283)
T cd05090 126 FLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK----SLLPIRWMPPEAIMYG 201 (283)
T ss_pred HHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccC----CCccceecChHHhccC
Confidence 3446677899999999999999999999999999999999999987533211000000 0011122333333345
Q ss_pred CCCCCCCcchHHHHHHHHHH
Q 012411 350 FLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 350 ~~~~~~D~~sl~~~l~~~~~ 369 (464)
..+.++|+|++|+.++++++
T Consensus 202 ~~~~~~Dv~slG~il~el~~ 221 (283)
T cd05090 202 KFSSDSDIWSFGVVLWEIFS 221 (283)
T ss_pred CCCchhhhHHHHHHHHHHHc
Confidence 56788999999999999997
No 267
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.84 E-value=6.7e-21 Score=181.59 Aligned_cols=185 Identities=19% Similarity=0.175 Sum_probs=121.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+++.|++|....... .+.+.+|
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----------------------------------~~~~~~e----- 48 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----------------------------------LQEIIKE----- 48 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----------------------------------HHHHHHH-----
Confidence 679999999999999987799999999864311 0111111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
...+.++ +++++.-..-+.......+++|||++|++|.+.........+. ...+..++..++.++|..|++|
T Consensus 49 -~~~~~~l-----~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H 122 (256)
T cd06612 49 -ISILKQC-----DSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIH 122 (256)
T ss_pred -HHHHHhC-----CCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 1111111 1122111111111224568999999999998875433333333 3345567778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+|++|+||+++.++.++|+|||++..+....... ....+....++++.......+.++|+|++|+.+++++++
T Consensus 123 ~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g 195 (256)
T cd06612 123 RDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR------NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEG 195 (256)
T ss_pred CCCCcceEEECCCCcEEEcccccchhcccCcccc------ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999999999999988765432110 001112222333333334457789999999999999984
No 268
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.84 E-value=3.7e-21 Score=186.56 Aligned_cols=190 Identities=22% Similarity=0.228 Sum_probs=119.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+..+|+.||||+........ .....+.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-------------------------------~~~~~~~~------ 48 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-------------------------------GIPNQALR------ 48 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc-------------------------------hhhHHHHH------
Confidence 57999999999999998889999999986432110 00001111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++. ++++.-..-+.......++||||+ |++|.+.........+.. ..+..++..++.++|+.|++|
T Consensus 49 e~~~l~~~~-----~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 122 (286)
T cd07832 49 EIKALQACQ-----HPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMH 122 (286)
T ss_pred HHHHHHhCC-----CCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 111111111 111111111112245668999999 999987654333334433 344567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+|+||+||++++++.++|+|||++...................+..||... .-...+.+.|+|++|+.+++++++
T Consensus 123 ~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~Di~slG~~l~~l~tg 197 (286)
T cd07832 123 RDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY----GARKYDPGVDLWAVGCIFAELLNG 197 (286)
T ss_pred CCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeee----ccccCCchhHHHHHHHHHHHHHcC
Confidence 999999999999999999999998876543211111111111222333221 112346789999999999999985
No 269
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.84 E-value=3.7e-21 Score=185.43 Aligned_cols=175 Identities=14% Similarity=0.184 Sum_probs=120.1
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
+|+|+||+||++..+.+|..+|+|+..+...... |...
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--------------------------------------e~~~---- 61 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--------------------------------------EPMV---- 61 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--------------------------------------hHHH----
Confidence 6999999999999988999999999864311100 0000
Q ss_pred HHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 216 QNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.....+++++ ++++. ......++||||++|++|.+...... ..+. ...+..++..++.++|+.|++|
T Consensus 62 ------~~~~~~h~~i--v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H 132 (267)
T PHA03390 62 ------HQLMKDNPNF--IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIH 132 (267)
T ss_pred ------HHHhhcCCCE--EEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 0001122332 22222 22356799999999999988754331 3333 3445577888999999999999
Q ss_pred CCCCCcceEEccCC-cEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g-~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+|+||+||+++.++ +++|+|||++..+..... . .+....++++....+..++++|+|++|+.+++++++
T Consensus 133 ~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~--~--------~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g 202 (267)
T PHA03390 133 NDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSC--Y--------DGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTG 202 (267)
T ss_pred CCCCHHHEEEeCCCCeEEEecCccceecCCCcc--C--------CCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHC
Confidence 99999999999988 999999999887653321 1 122233344444444557789999999999999985
Q ss_pred h
Q 012411 371 A 371 (464)
Q Consensus 371 ~ 371 (464)
.
T Consensus 203 ~ 203 (267)
T PHA03390 203 K 203 (267)
T ss_pred C
Confidence 4
No 270
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.84 E-value=4e-20 Score=179.07 Aligned_cols=196 Identities=16% Similarity=0.084 Sum_probs=122.0
Q ss_pred cccccceecEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|++|.||+|++..+|+ .||||+.+........ ..
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~--------------------------------~~----- 55 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN--------------------------------KE----- 55 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHH--------------------------------HH-----
Confidence 789999999999999876776 4899998643221110 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeec-cCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE 286 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~ 286 (464)
+..|...+..+ +++++ +.++. ......+++|||+++++|.+............ ..+..++..++.|+|+
T Consensus 56 -~~~e~~~l~~~-----~~~~i--~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~ 127 (279)
T cd05109 56 -ILDEAYVMAGV-----GSPYV--CRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE 127 (279)
T ss_pred -HHHHHHHHHhc-----CCCCC--ceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11122111111 11222 12111 12345679999999999987754322223333 3345678889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
.|++|+|+||+||+++.++.++|+|||++..+....... ..+......+..||. ...+..+.++|+|++|+.++
T Consensus 128 ~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~-----~~~~~~~~~~Di~slG~~l~ 202 (279)
T cd05109 128 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES-----ILHRRFTHQSDVWSYGVTVW 202 (279)
T ss_pred CCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHH-----hccCCCCchhHHHHHHHHHH
Confidence 999999999999999999999999999988764322110 000000112233443 33344577899999999999
Q ss_pred HHHHHhccCCCCcCc
Q 012411 366 NFFDDALNSSVSELN 380 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~ 380 (464)
++++. ...|+....
T Consensus 203 el~t~-g~~p~~~~~ 216 (279)
T cd05109 203 ELMTF-GAKPYDGIP 216 (279)
T ss_pred HHHcC-CCCCCCCCC
Confidence 98871 233444433
No 271
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.84 E-value=9.2e-21 Score=189.13 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 272 ~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
.+..++..++.|+|+.|++|||+||+|||++.+++++|+|||++..+.........+. ......+++++.+.-+..
T Consensus 177 ~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~ 252 (337)
T cd05054 177 SYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD----ARLPLKWMAPESIFDKVY 252 (337)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccC----CCCCccccCcHHhcCCCC
Confidence 3456788899999999999999999999999999999999999987643321110010 011122333343344456
Q ss_pred CCCCCcchHHHHHHHHHH
Q 012411 352 SPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~ 369 (464)
+.+.|+||+|+.++++++
T Consensus 253 ~~~~Di~SlGv~l~el~t 270 (337)
T cd05054 253 TTQSDVWSFGVLLWEIFS 270 (337)
T ss_pred CccccHHHHHHHHHHHHH
Confidence 788999999999999986
No 272
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.84 E-value=8.3e-21 Score=184.09 Aligned_cols=134 Identities=13% Similarity=0.046 Sum_probs=92.1
Q ss_pred CCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
...+++|||+++++|.+.........+.. ..+..++..++.|+|+.|++|+|+||+||+++.++.++|+|||+++.+.
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 34579999999999988755433333433 3345678889999999999999999999999999999999999998764
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc
Q 012411 320 EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
+......... ..+....++++....+..+.+.|+|++|+.++++++. ...|+....
T Consensus 161 ~~~~~~~~~~----~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~-g~~p~~~~~ 216 (279)
T cd05111 161 PDDKKYFYSE----HKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSY-GAEPYAGMR 216 (279)
T ss_pred CCCcccccCC----CCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcC-CCCCCCCCC
Confidence 3321111100 0111122333343445567889999999999999871 233444433
No 273
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.84 E-value=8.1e-21 Score=181.02 Aligned_cols=196 Identities=12% Similarity=0.076 Sum_probs=123.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|....+++.||||+........ ...+.+...+..+....|+++..+.+.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~e~~~l~~~~~~~i~~~~~~------------- 67 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-----DERLAAQNECQVLKLLSHPNIIEYYEN------------- 67 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEecccccc-----HHHHHHHHHHHHHhhCCCCchhheeee-------------
Confidence 67999999999999998899999999986431110 000011111111111123333322221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHH--HHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLD--LVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~--~~~~~i~~~l~~lh~~gi~ 290 (464)
.......++||||++|++|.+...... ...+... .+..++..++.++|++|++
T Consensus 68 ------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~ 123 (256)
T cd08220 68 ------------------------FLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123 (256)
T ss_pred ------------------------EecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 112345689999999999988754322 2233333 3346677899999999999
Q ss_pred cCCCCCcceEEccCC-cEEEEecCCCCcCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEG-KLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 291 H~Dlkp~Nili~~~g-~i~l~DFGl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
|+|++|+||++++++ .++|+|||++..+...... ... +.+..++++.......+.+.|+|++|+.+++++
T Consensus 124 h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~--------~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~ 195 (256)
T cd08220 124 HRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVV--------GTPCYISPELCEGKPYNQKSDIWALGCVLYELA 195 (256)
T ss_pred cCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccc--------cCCcccCchhccCCCCCcccchHHHHHHHHHHH
Confidence 999999999998654 5899999999876543211 111 122223333333344577899999999999999
Q ss_pred HHhccCCCCcCcH
Q 012411 369 DDALNSSVSELNF 381 (464)
Q Consensus 369 ~~~~~~~~~~~~~ 381 (464)
++ ..++...+.
T Consensus 196 ~~--~~~~~~~~~ 206 (256)
T cd08220 196 SL--KRAFEAANL 206 (256)
T ss_pred hC--CCCcccCch
Confidence 84 344444443
No 274
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.84 E-value=8.8e-21 Score=181.93 Aligned_cols=189 Identities=14% Similarity=0.095 Sum_probs=119.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.||+|..++....... ..+.+.+|+.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------~~~~~~~ei~--- 54 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAK------------------------------ARQDCLKEID--- 54 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccchh------------------------------hHHHHHHHHH---
Confidence 6799999999999999889999999988642110000 0011111211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH---hcCCCHH--HHHHHHHHHHHHHHHHCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVL--DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (464)
.+.++ +++.+.-+.-+.......+++|||++|++|.+..... ....... ..+..++..++.++|+.|
T Consensus 55 ---~l~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 126 (267)
T cd08224 55 ---LLKQL-----DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR 126 (267)
T ss_pred ---HHHhC-----CCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11111 1122211111112234568999999999998764321 1112332 233456777999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
++|+|++|+||+++.+|.++|+|||++..+...... ...+ ...+..||. ......+.+.|+|++|+.+++
T Consensus 127 i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~---~~~y~apE~-----~~~~~~~~~~Di~slG~il~~ 198 (267)
T cd08224 127 IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG---TPYYMSPER-----IHENGYNFKSDIWSLGCLLYE 198 (267)
T ss_pred EecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecC---CccccCHHH-----hccCCCCchhcHHHHHHHHHH
Confidence 999999999999999999999999998765432111 1111 112223443 333334678999999999999
Q ss_pred HHHHh
Q 012411 367 FFDDA 371 (464)
Q Consensus 367 ~~~~~ 371 (464)
++++.
T Consensus 199 l~~g~ 203 (267)
T cd08224 199 MAALQ 203 (267)
T ss_pred HHHCC
Confidence 99853
No 275
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.84 E-value=1.8e-20 Score=178.78 Aligned_cols=242 Identities=16% Similarity=0.159 Sum_probs=146.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|.+. ++..+|+|..+.+.... -+|..
T Consensus 10 ~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~----------------------------------------~~~~~ 48 (256)
T cd05112 10 QEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSE----------------------------------------EDFIE 48 (256)
T ss_pred eeecCcccceEEEEEEe-CCCeEEEEECCCCCCCH----------------------------------------HHHHH
Confidence 67999999999999986 68899999886442110 01122
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ +++++.-..-+.......+++|||++|++|.+............ ..+..++..++.++|+.|++|
T Consensus 49 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h 123 (256)
T cd05112 49 EAQVMMKL-----SHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIH 123 (256)
T ss_pred HHHHHHhC-----CCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 22222222 12222111112223456789999999999987754332223333 334456778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.++.++|+|||++............+......+..|| ....+..+.++|+|++|+.+++++..
T Consensus 124 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe-----~~~~~~~~~~~Dv~slG~~l~el~~~- 197 (256)
T cd05112 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPE-----VFSFSKYSSKSDVWSFGVLMWEVFSE- 197 (256)
T ss_pred cccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHh-----HhccCCcChHHHHHHHHHHHHHHHcC-
Confidence 999999999999999999999998765432111111111111223344 33345567789999999999999872
Q ss_pred ccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHhhhHHHHHHhcCCCCHHHHHHHH
Q 012411 372 LNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDALV 451 (464)
Q Consensus 372 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~~~ 451 (464)
...|+.......+...+... . ....|.. .......++.+++ ..+|..||++.
T Consensus 198 g~~p~~~~~~~~~~~~~~~~---~----------------------~~~~~~~-~~~~~~~l~~~~l--~~~p~~Rp~~~ 249 (256)
T cd05112 198 GKTPYENRSNSEVVETINAG---F----------------------RLYKPRL-ASQSVYELMQHCW--KERPEDRPSFS 249 (256)
T ss_pred CCCCCCcCCHHHHHHHHhCC---C----------------------CCCCCCC-CCHHHHHHHHHHc--ccChhhCCCHH
Confidence 23455444444434333110 0 1111211 1234555665555 45688888888
Q ss_pred HHhc
Q 012411 452 ELLF 455 (464)
Q Consensus 452 ~~l~ 455 (464)
+++.
T Consensus 250 ~~l~ 253 (256)
T cd05112 250 LLLH 253 (256)
T ss_pred HHHH
Confidence 8763
No 276
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.84 E-value=4.5e-21 Score=183.82 Aligned_cols=199 Identities=17% Similarity=0.122 Sum_probs=124.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||.|++|+||+|....+|..|++|+........ +.. . +..
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~-----------------------------~------~~~ 48 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVD-----------------------------E------LRK 48 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHH-----------------------------H------HHH
Confidence 67999999999999988789999999986331111 000 0 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc--CCCH--HHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ--GLKV--LDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~--~~~~--~~~~~~~i~~~l~~lh~~gi 289 (464)
|+..+..+ +++++.-..-........+++||+++|++|.+....... ..+. ...+..++..++.++|+.|+
T Consensus 49 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i 123 (267)
T cd06610 49 EVQAMSQC-----NHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ 123 (267)
T ss_pred HHHHHHhc-----CCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 11111111 122221111112234567899999999999887543211 2333 33445778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~D~~sl~~~l~~~~ 368 (464)
+|+|++|.||++++++.++|+|||++..+........ .......+.+..++++....+ ..+.+.|+|++|+.+++++
T Consensus 124 ~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~ 201 (267)
T cd06610 124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR--KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELA 201 (267)
T ss_pred ecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc--cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHH
Confidence 9999999999999999999999999876644321100 000001111222233333333 4577899999999999999
Q ss_pred HHhccCCCCcC
Q 012411 369 DDALNSSVSEL 379 (464)
Q Consensus 369 ~~~~~~~~~~~ 379 (464)
++ ..|+...
T Consensus 202 ~g--~~p~~~~ 210 (267)
T cd06610 202 TG--AAPYSKY 210 (267)
T ss_pred hC--CCCcccc
Confidence 84 3444433
No 277
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.84 E-value=2.2e-21 Score=188.60 Aligned_cols=237 Identities=19% Similarity=0.246 Sum_probs=157.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
..||.|+||.||-+.-+.||+-+|.|.+... +.... .|.--+
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~-------------------------------------ge~maL 233 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRK-------------------------------------GETMAL 233 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhh-------------------------------------hhHHhh
Confidence 6899999999999999999999999976422 11100 000012
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeec-cCCCCceEEEeeecCcccCcHHH-HHhcCCCHH--HHHHHHHHHHHHHHHHCC
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVA-IESQGLKVL--DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (464)
+|...+.++.. + +.|--.|. +.....+|||..+.||+|.-.+. ....+++.. ..+...|.++|++||+.+
T Consensus 234 nEk~iL~kV~s-----~-FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~ 307 (591)
T KOG0986|consen 234 NEKQILEKVSS-----P-FIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR 307 (591)
T ss_pred HHHHHHHHhcc-----C-cEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc
Confidence 22223332221 2 23333333 33456799999999999965432 333455544 456678889999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|+.||+||+|||+|+.|++.|+|.|++..+++.....- .||.. +|++++..-+.++..+|.|++||.+|+|
T Consensus 308 iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~G--------YMAPEvl~ne~Y~~s~Dwf~lGCllYem 379 (591)
T KOG0986|consen 308 IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVG--------YMAPEVLQNEVYDFSPDWFSLGCLLYEM 379 (591)
T ss_pred eeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCccc--------ccCHHHHcCCcccCCccHHHHHhHHHHH
Confidence 99999999999999999999999999999987654322 44433 4445555566668899999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 368 FDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
+.+ ..|+....-+.--+++.....+.+...|..|+.-.|++. +|+ +.-||..++
T Consensus 380 i~G--~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc--~~L-L~Kdp~~RL 433 (591)
T KOG0986|consen 380 IAG--HSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLC--EGL-LTKDPEKRL 433 (591)
T ss_pred Hcc--cCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHH--HHH-HccCHHHhc
Confidence 984 456665544443445555555555555555555555542 111 345565444
No 278
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.84 E-value=6.6e-21 Score=183.48 Aligned_cols=139 Identities=14% Similarity=0.110 Sum_probs=90.3
Q ss_pred CCCceEEEeeecCcccCcHHHHHhcC------CCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCC
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQG------LKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl 314 (464)
....++||||++|++|.+........ ......+..++..++.|+|+.|++|+|+||.||+++.+++++|+|||+
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~ 146 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGL 146 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEecccc
Confidence 35678999999999998875432211 112234556788899999999999999999999999999999999999
Q ss_pred CCcCCHHHHH-HHHHHHHHHHhcCHHHHHHHHH--HcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc
Q 012411 315 MSETPEEARF-AIIGHVVHMVNRDYEAMARDYY--ALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 315 ~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
+......... ..........+..||.+..... .....+.++|+|++|+.++++++. ...++....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~-~~~p~~~~~ 214 (269)
T cd05042 147 ALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTA-ADQPYPDLS 214 (269)
T ss_pred ccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhC-CCCCCCcCC
Confidence 8754332110 0000001112334444322111 112346789999999999999872 233444433
No 279
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.84 E-value=8e-21 Score=181.70 Aligned_cols=195 Identities=21% Similarity=0.222 Sum_probs=126.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||.|++|.||+|....+++.+++|+........ . +.+...+..+....|++++.+.+
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~---~~~~~e~~~l~~~~h~~i~~~~~-------------- 67 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----F---EIIQQEISMLKECRHPNIVAYFG-------------- 67 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----H---HHHHHHHHHHHhCCCCChhceEE--------------
Confidence 78999999999999998789999999987542221 0 11111111111223444333222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
+.......+++|||++|++|.++........+.. ..+..++..++.++|+.|++|
T Consensus 68 -----------------------~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h 124 (262)
T cd06613 68 -----------------------SYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIH 124 (262)
T ss_pred -----------------------EEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 1112345689999999999988754432334433 345567778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcchHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD---FLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~D~~sl~~~l~~~~ 368 (464)
+|++|.||+++.+|.++|+|||++..+....... .. ..+....++++..... ..+..+|+|++|+.+++++
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~-~~-----~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~ 198 (262)
T cd06613 125 RDIKGANILLTEDGDVKLADFGVSAQLTATIAKR-KS-----FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELA 198 (262)
T ss_pred cCCChhhEEECCCCCEEECccccchhhhhhhhcc-cc-----ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHH
Confidence 9999999999999999999999988765432110 00 0111122333333222 4567899999999999999
Q ss_pred HHhccCCCCcCc
Q 012411 369 DDALNSSVSELN 380 (464)
Q Consensus 369 ~~~~~~~~~~~~ 380 (464)
++ ..|+.+.+
T Consensus 199 tg--~~p~~~~~ 208 (262)
T cd06613 199 EL--QPPMFDLH 208 (262)
T ss_pred hC--CCCCCCCC
Confidence 84 34554443
No 280
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.84 E-value=5.5e-20 Score=175.71 Aligned_cols=195 Identities=16% Similarity=0.173 Sum_probs=124.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.. .|..||+|..+..... + ++..
T Consensus 12 ~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~-----------------------------------~------~~~~ 48 (256)
T cd05082 12 QTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATA-----------------------------------Q------AFLA 48 (256)
T ss_pred eeecccCCCeEEEEEE--cCCcEEEEEeCCCchH-----------------------------------H------HHHH
Confidence 6799999999999987 5889999987643110 0 0112
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC-CCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-LKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|+..+.++ .+..-+.....+....+..+++|||++|++|.+........ .+. ...+..++..++.++|+.|++
T Consensus 49 e~~~l~~l----~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 124 (256)
T cd05082 49 EASVMTQL----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFV 124 (256)
T ss_pred HHHHHHhC----CCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 22222221 11111222222223335678999999999998875432221 222 234456777899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||++++++.++|+|||++......... .. .....++++....+..+.+.|+|++|+.++++++.
T Consensus 125 H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~--------~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~ 195 (256)
T cd05082 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-GK--------LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 195 (256)
T ss_pred ccccchheEEEcCCCcEEecCCccceeccccCCC-Cc--------cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhC
Confidence 9999999999999999999999998765332110 00 01122333344445567789999999999999862
Q ss_pred hccCCCCcCcHHHHH
Q 012411 371 ALNSSVSELNFKTIV 385 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~ 385 (464)
...|+...+...+.
T Consensus 196 -g~~p~~~~~~~~~~ 209 (256)
T cd05082 196 -GRVPYPRIPLKDVV 209 (256)
T ss_pred -CCCCCCCCCHHHHH
Confidence 23444444444433
No 281
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=2e-21 Score=196.92 Aligned_cols=234 Identities=18% Similarity=0.182 Sum_probs=146.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..+|.|||+.|.++.+..+++..+||++.....+. .....++.. -..|+|++++.+.+.
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~-~~e~~~~~~---------~~~h~niv~~~~v~~----------- 386 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTDQEPAVKIISKRADDN-QDEIPISLL---------VRDHPNIVKSHDVYE----------- 386 (612)
T ss_pred cccCCCCccceeeeeccccccchhheecccccccc-ccccchhhh---------hcCCCcceeecceec-----------
Confidence 45999999999999999999999999986441111 111111110 012455554444322
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
.....|+|||.+.|+.+.+.+............+..++..++.|||++|+||||
T Consensus 387 --------------------------~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRD 440 (612)
T KOG0603|consen 387 --------------------------DGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRD 440 (612)
T ss_pred --------------------------CCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecC
Confidence 124567999999998887754433322223334667788899999999999999
Q ss_pred CCCcceEE-ccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 294 PHPGNLLA-TPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 294 lkp~Nili-~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
+||+|||+ +..|+++|+|||.++.+..+.. .-.....+-.||.++ .--.++.+|+||+|+.+++|++++.
T Consensus 441 Lkp~NIL~~~~~g~lrltyFG~a~~~~~~~~----tp~~t~~y~APEvl~-----~~~yt~acD~WSLGvlLy~ML~G~t 511 (612)
T KOG0603|consen 441 LKPGNILLDGSAGHLRLTYFGFWSELERSCD----TPALTLQYVAPEVLA-----IQEYTEACDWWSLGVLLYEMLTGRT 511 (612)
T ss_pred CChhheeecCCCCcEEEEEechhhhCchhhc----ccchhhcccChhhhc-----cCCCCcchhhHHHHHHHHHHHhCCC
Confidence 99999999 5899999999999999877611 101122222344333 3334889999999999999999643
Q ss_pred cCCCCcCcHH-HHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHH
Q 012411 373 NSSVSELNFK-TIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYF 434 (464)
Q Consensus 373 ~~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~ 434 (464)
++....-+ ++...++.. .+...+......+++.| +++||..|+... ++||+
T Consensus 512 --p~~~~P~~~ei~~~i~~~--~~s~~vS~~AKdLl~~L-------L~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 512 --LFAAHPAGIEIHTRIQMP--KFSECVSDEAKDLLQQL-------LQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred --ccccCCchHHHHHhhcCC--ccccccCHHHHHHHHHh-------ccCChhhCcChhhhccCcch
Confidence 33222222 222212110 01123444444444444 567776666554 56665
No 282
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=2.6e-20 Score=172.80 Aligned_cols=172 Identities=17% Similarity=0.228 Sum_probs=116.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+++|.|+||.||.+.. ++..+|||+.+|..... +.+...+...--|.+
T Consensus 37 ~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~------------------------------~~~~~~f~~g~~~e~ 84 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRT------------------------------ERFLKSFVKGDYYEN 84 (232)
T ss_pred EEecCCCceEEEEEec--CCCcEEEEEechhcCch------------------------------HHHHHhhhhhHHHHH
Confidence 8899999999999765 57789999998763321 001111111222566
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec---c-----CCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW---D-----YTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL 285 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~---~-----~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh 285 (464)
|+.++.++.+. ++..|..+. + +++..+|||||++|.+|.+... .+. ....++..++.++|
T Consensus 85 Ea~~l~rL~~~-----GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~--~~~~~i~~~l~~lH 152 (232)
T PRK10359 85 LIVQTDRVRSE-----GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE--DVKAKIKASIESLH 152 (232)
T ss_pred HHHHHHHHHHC-----CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH--HHHHHHHHHHHHHH
Confidence 78888888553 444444431 1 3567899999999999977622 111 23446777999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
+.|++||||||+||+++++| ++|+|||.+....++....+ .. ..-- . .-+.|+|++|..+.
T Consensus 153 ~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d~-----~v--------ler~--y---~~~~di~~lg~~~~ 213 (232)
T PRK10359 153 QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKDR-----ID--------LERH--Y---GIKNEIKDLGYYLL 213 (232)
T ss_pred HcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhHHH-----HH--------HHhH--h---cccccccceeEeeh
Confidence 99999999999999999999 99999999987754432211 01 1111 1 24789999987654
Q ss_pred HHH
Q 012411 366 NFF 368 (464)
Q Consensus 366 ~~~ 368 (464)
-+.
T Consensus 214 ~~~ 216 (232)
T PRK10359 214 IYK 216 (232)
T ss_pred HHH
Confidence 433
No 283
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.84 E-value=6.1e-21 Score=182.72 Aligned_cols=199 Identities=18% Similarity=0.157 Sum_probs=125.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.|++|+.+..... . ...+.+....+.+....|+++..+++.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~---~~~~~~~~e~~~~~~l~~~~i~~~~~~------------- 67 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--P---KTIKEIADEMKVLELLKHPNLVKYYGV------------- 67 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--h---HHHHHHHHHHHHHHhCCCCChhheeee-------------
Confidence 6899999999999998878999999998754221 0 011111111111111223333222221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
....+..++|+||++|++|.+...... ........+..++..++.++|+.|++|+
T Consensus 68 ------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~ 123 (264)
T cd06626 68 ------------------------EVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHR 123 (264)
T ss_pred ------------------------EecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 112345689999999999998754321 2233344455678889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC---CCCCCCcchHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF---LSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~D~~sl~~~l~~~~~ 369 (464)
|++|+||+++.++.++|+|||.+..+......... .. ....+.+..++++....+. .+.++|+|++|+.+++++.
T Consensus 124 dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~-~~-~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~ 201 (264)
T cd06626 124 DIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE-EV-QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT 201 (264)
T ss_pred CCCHHHEEECCCCCEEEcccccccccCCCCCcccc-cc-cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHh
Confidence 99999999999999999999998876443211000 00 0011122223333332222 5678999999999999998
Q ss_pred HhccCCCCc
Q 012411 370 DALNSSVSE 378 (464)
Q Consensus 370 ~~~~~~~~~ 378 (464)
+ ..|+..
T Consensus 202 g--~~pf~~ 208 (264)
T cd06626 202 G--KRPWSE 208 (264)
T ss_pred C--CCCccC
Confidence 4 345543
No 284
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.84 E-value=4.5e-21 Score=195.46 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 273 ~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
+..++..++.|+|+.|++|+|+||.|||++.++.++|+|||++..+....... ...+. ..+..++++....+..
T Consensus 244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~-----~~~~y~aPE~~~~~~~ 318 (401)
T cd05107 244 FSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTF-----LPLKWMAPESIFNNLY 318 (401)
T ss_pred HHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcC-----CCCceeChHHhcCCCC
Confidence 34567789999999999999999999999999999999999998653221100 00011 1122333334444556
Q ss_pred CCCCCcchHHHHHHHHHH
Q 012411 352 SPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~ 369 (464)
+.++|+|++|+.++++++
T Consensus 319 ~~~~DvwslGvil~e~l~ 336 (401)
T cd05107 319 TTLSDVWSFGILLWEIFT 336 (401)
T ss_pred CcHhHHHHHHHHHHHHHH
Confidence 788999999999999987
No 285
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.84 E-value=5e-21 Score=186.43 Aligned_cols=140 Identities=15% Similarity=0.149 Sum_probs=94.2
Q ss_pred CCCceEEEeeecCcccCcHHHHHh------------cCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCc
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIES------------QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK 306 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~------------~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~ 306 (464)
....+++|||++|++|.++..... ..++.. ..+..++..++.++|+.|++|||+||.||++++++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 456799999999999987643221 113333 344567888999999999999999999999999999
Q ss_pred EEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 012411 307 LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 307 i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (464)
++|+|||++..+.........+ .....+..++++.......+.+.|+|++|+.++++++. ...|+...+.....
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~-g~~p~~~~~~~~~~ 232 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGG----HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY-GKQPWYQLSNNEVI 232 (288)
T ss_pred EEeccCCccccccCCceeecCC----CCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCCHHHHH
Confidence 9999999988653321100000 00011233444444445567889999999999999871 23445444444433
No 286
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.84 E-value=2.6e-20 Score=180.20 Aligned_cols=200 Identities=14% Similarity=0.083 Sum_probs=122.8
Q ss_pred cccccceecEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||.|++|+||+|.+. .++..||||+........-.
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~-------------------------------------- 53 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRER-------------------------------------- 53 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHH--------------------------------------
Confidence 67999999999999864 23568999987543111000
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc---------CCCHHH--HHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------GLKVLD--LVNTGI 277 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------~~~~~~--~~~~~i 277 (464)
.++..|...+.. + +++++.-..-+....+..++||||++|++|.++...... ..+... .+..++
T Consensus 54 ~~~~~e~~~l~~----l-~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 128 (277)
T cd05062 54 IEFLNEASVMKE----F-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEI 128 (277)
T ss_pred HHHHHHHHHHHh----C-CCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHH
Confidence 011122211111 1 122222111122334567999999999999887532111 112222 234567
Q ss_pred HHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 012411 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (464)
Q Consensus 278 ~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~ 357 (464)
..++.|+|+.|++|+|+||+||++++++.++|+|||++..+......... ......+..++++....+..+..+|+
T Consensus 129 ~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di 204 (277)
T cd05062 129 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG----GKGLLPVRWMSPESLKDGVFTTYSDV 204 (277)
T ss_pred HHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecC----CCCccCHhhcChhHhhcCCcCchhHH
Confidence 78999999999999999999999999999999999998765322110000 00001123344444445666888999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcH
Q 012411 358 TPIVPALRNFFDDALNSSVSELNF 381 (464)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~ 381 (464)
||+|+.++++++. ...++...+.
T Consensus 205 ~slG~~l~el~~~-~~~p~~~~~~ 227 (277)
T cd05062 205 WSFGVVLWEIATL-AEQPYQGMSN 227 (277)
T ss_pred HHHHHHHHHHHcC-CCCCCCCCCH
Confidence 9999999999872 2234444443
No 287
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.84 E-value=9.6e-21 Score=185.11 Aligned_cols=193 Identities=18% Similarity=0.174 Sum_probs=125.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|..||+|+......... -.....+ ..+....|++++.+.+.+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~---~~~~~e~----~~l~~l~hp~i~~~~~~~------------ 85 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKK---ELIINEI----LVMRENKHPNIVNYLDSY------------ 85 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHH---HHHHHHH----HHHhhcCCCCeeehhhee------------
Confidence 789999999999999887899999998753211110 0001111 111112244433333211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
......++||||++|++|.++.............+..++..++.++|+.|++|+|
T Consensus 86 -------------------------~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~d 140 (293)
T cd06647 86 -------------------------LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 140 (293)
T ss_pred -------------------------eeCCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence 1235678999999999998874432222223344556777899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~ 373 (464)
++|+||+++.++.++|+|||++.......... . ...+.+..++++.+..+..+.+.|+|++|+.+++++++.
T Consensus 141 L~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~-~-----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~-- 212 (293)
T cd06647 141 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKR-S-----TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE-- 212 (293)
T ss_pred CCHHHEEEcCCCCEEEccCcceeccccccccc-c-----cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCC--
Confidence 99999999999999999999887654432110 0 001122233334444455577899999999999999843
Q ss_pred CCCCc
Q 012411 374 SSVSE 378 (464)
Q Consensus 374 ~~~~~ 378 (464)
.|+..
T Consensus 213 ~pf~~ 217 (293)
T cd06647 213 PPYLN 217 (293)
T ss_pred CCCCC
Confidence 44443
No 288
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.84 E-value=5e-20 Score=179.40 Aligned_cols=200 Identities=15% Similarity=0.110 Sum_probs=122.2
Q ss_pred cccccceecEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|..+. ++..||||......... ..
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~ 53 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR--------------------------------------ER 53 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH--------------------------------------HH
Confidence 689999999999997641 34589999875331110 00
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc---------CCC--HHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------GLK--VLDLVNTGI 277 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------~~~--~~~~~~~~i 277 (464)
.++..|...+.++ +++++....-+.......++||||++|++|.+....... ... ....+..++
T Consensus 54 ~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 128 (288)
T cd05061 54 IEFLNEASVMKGF-----TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128 (288)
T ss_pred HHHHHHHHHHHhC-----CCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHH
Confidence 1122222222222 122222222122334567999999999999987543211 011 122345677
Q ss_pred HHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 012411 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (464)
Q Consensus 278 ~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~ 357 (464)
..++.|+|+.|++|+|+||.||+++.++.++|+|||+++.+.........+ ........++++....+..+.+.|+
T Consensus 129 ~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~----~~~~~~~y~~pE~~~~~~~~~~~Dv 204 (288)
T cd05061 129 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG----KGLLPVRWMAPESLKDGVFTTSSDM 204 (288)
T ss_pred HHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccC----CCcccccccCHHHhccCCCChHhHH
Confidence 889999999999999999999999999999999999988653321100000 0000112233333344556788999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcH
Q 012411 358 TPIVPALRNFFDDALNSSVSELNF 381 (464)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~ 381 (464)
|++|+.++++++. ...++...+.
T Consensus 205 wslG~~l~el~~~-~~~p~~~~~~ 227 (288)
T cd05061 205 WSFGVVLWEITSL-AEQPYQGLSN 227 (288)
T ss_pred HHHHHHHHHHHhC-CCCCCCCCCH
Confidence 9999999999862 2234444443
No 289
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.84 E-value=4.6e-20 Score=178.55 Aligned_cols=202 Identities=17% Similarity=0.174 Sum_probs=124.8
Q ss_pred cccccceecEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||.|++|.||+|.+.. ++..||+|......... .+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~--------------------------------------~~ 53 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ--------------------------------------DE 53 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH--------------------------------------HH
Confidence 689999999999999975 56789999876432211 01
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc------CCCHHH--HHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ------GLKVLD--LVNTGIQCS 280 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~------~~~~~~--~~~~~i~~~ 280 (464)
.+|..|...+.++. ++++.--.-+.......+++|||++|++|.++...... ..+... .+..++..+
T Consensus 54 ~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~ 128 (277)
T cd05036 54 SDFLMEALIMSKFN-----HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKG 128 (277)
T ss_pred HHHHHHHHHHHhCC-----CCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 11222322222221 12221111112223557899999999999887543321 233333 345677889
Q ss_pred HHHHHHCCcccCCCCCcceEEccCC---cEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 012411 281 LRQLLEYGYFHADPHPGNLLATPEG---KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (464)
Q Consensus 281 l~~lh~~gi~H~Dlkp~Nili~~~g---~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~ 357 (464)
+.++|+.|++|+|+||+||+++.++ .++|+|||++..+.........+ ........++++....+..+.++|+
T Consensus 129 l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Di 204 (277)
T cd05036 129 CKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGG----RAMLPIKWMPPEAFLDGIFTSKTDV 204 (277)
T ss_pred HHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCC----CCCccHhhCCHHHHhcCCcCchhHH
Confidence 9999999999999999999998665 59999999998763221100000 0001122334444444556889999
Q ss_pred chHHHHHHHHHHHhccCCCCcCcHHH
Q 012411 358 TPIVPALRNFFDDALNSSVSELNFKT 383 (464)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (464)
|++|+.++++++. ...|+...+...
T Consensus 205 wslG~il~el~~~-g~~pf~~~~~~~ 229 (277)
T cd05036 205 WSFGVLLWEIFSL-GYMPYPGRTNQE 229 (277)
T ss_pred HHHHHHHHHHHcC-CCCCCCCCCHHH
Confidence 9999999999862 234555444433
No 290
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.84 E-value=6.1e-20 Score=175.84 Aligned_cols=199 Identities=16% Similarity=0.154 Sum_probs=122.5
Q ss_pred ccccceecEEEEEEEc--cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 135 PIAAASLGQVYKAQLK--YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.||+|+||.||+|.++ .++..||||+..+...... .+. +.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~--------------------------------~~~------~~ 43 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSV--------------------------------RDE------MM 43 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHH--------------------------------HHH------HH
Confidence 3899999999999875 3456799999875422110 011 11
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCcc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi~ 290 (464)
.|+.-+.++ .+..-+.+..++ .....++||||++|++|.+.........+... .+..++..++.++|+.|++
T Consensus 44 ~E~~~l~~l----~h~~ii~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 117 (257)
T cd05115 44 REAEIMHQL----DNPYIVRMIGVC--EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFV 117 (257)
T ss_pred HHHHHHHhc----CCCCeEEEEEEE--cCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCee
Confidence 222222222 111122222222 12456899999999999887543333344433 3446677899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||+++.++.++|+|||++..+........... .....+..++++....+..+.++|+|++|+.+++++..
T Consensus 118 H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 194 (257)
T cd05115 118 HRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS---AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSY 194 (257)
T ss_pred ecccchheEEEcCCCcEEeccCCccccccCCccceeccC---CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcC
Confidence 999999999999999999999999876543211100000 00001223333344445567789999999999998851
Q ss_pred hccCCCCcCcH
Q 012411 371 ALNSSVSELNF 381 (464)
Q Consensus 371 ~~~~~~~~~~~ 381 (464)
...|+...+-
T Consensus 195 -g~~p~~~~~~ 204 (257)
T cd05115 195 -GQKPYKKMKG 204 (257)
T ss_pred -CCCCcCcCCH
Confidence 2345544443
No 291
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.84 E-value=5.5e-21 Score=186.15 Aligned_cols=188 Identities=20% Similarity=0.244 Sum_probs=119.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|++|.||+|..+.+|+.||||..+....... . .. +..
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------------------~--------~~------~~~ 52 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------------------P--------FT------AIR 52 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------------------c--------hh------HHH
Confidence 789999999999999988899999999864421100 0 00 011
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ +++++.-..-+.......++||||++| +|.+.........+ ....+..++..++.++|+.|++|
T Consensus 53 E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H 126 (291)
T cd07844 53 EASLLKDL-----KHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLH 126 (291)
T ss_pred HHHHHhhC-----CCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 22222222 122222222222334567899999986 77665432222333 33344567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+|+||+||+++.+|.++|+|||++......... .........+..||... .....+.++|+|++|+.+++++.+
T Consensus 127 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~----~~~~~~~~~Dv~slG~il~~l~~g 200 (291)
T cd07844 127 RDLKPQNLLISERGELKLADFGLARAKSVPSKT-YSNEVVTLWYRPPDVLL----GSTEYSTSLDMWGVGCIFYEMATG 200 (291)
T ss_pred ccCCHHHEEEcCCCCEEECccccccccCCCCcc-ccccccccccCCcHHhh----cCcccCcHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999998754321110 00011122233444322 112346789999999999999985
No 292
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.84 E-value=3.7e-21 Score=184.87 Aligned_cols=187 Identities=19% Similarity=0.179 Sum_probs=120.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|+...+|+.||+|+.+....... . .+.+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~----~-----------------------------~~~~------ 55 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF----S-----------------------------LIQQ------ 55 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH----H-----------------------------HHHH------
Confidence 679999999999999988999999999874422110 0 0111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|+..+.++ +++++.-..-+.......++||||++|++|.+..... ...+ ....+..++..++.++|+.|++|
T Consensus 56 e~~~l~~~-----~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 129 (267)
T cd06646 56 EIFMVKEC-----KHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMH 129 (267)
T ss_pred HHHHHHhc-----CCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 11111111 1122111111112234568999999999998864322 2233 33345567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|++|+||+++.++.++|+|||++..+.... .....++ ..+..||.+... ..+..+.+.|+|++|+.++++++
T Consensus 130 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~---~~y~~PE~~~~~--~~~~~~~~~Dvws~G~il~el~~ 204 (267)
T cd06646 130 RDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGT---PYWMAPEVAAVE--KNGGYNQLCDIWAVGITAIELAE 204 (267)
T ss_pred cCCCHHHEEECCCCCEEECcCccceeecccccccCccccC---ccccCHhHcccc--cCCCCcchhhHHHHHHHHHHHHh
Confidence 9999999999999999999999998764321 1111111 222334433111 12224567999999999999998
Q ss_pred H
Q 012411 370 D 370 (464)
Q Consensus 370 ~ 370 (464)
+
T Consensus 205 g 205 (267)
T cd06646 205 L 205 (267)
T ss_pred C
Confidence 4
No 293
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.83 E-value=9.7e-21 Score=188.59 Aligned_cols=202 Identities=16% Similarity=0.150 Sum_probs=125.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|....+|+.||+|+........ ...+.+...+..+..+.|++++.+.+.+...
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------- 76 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP-----TLAKRTLRELKILRHFKHDNIIAIRDILRPP--------- 76 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc-----cchHHHHHHHHHHHhcCCCCccCHHHhcccc---------
Confidence 67999999999999998899999999986432110 0001111111112223366666555433211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.......++||||+.| +|.+..... .........+..++..++.+||..|++|+
T Consensus 77 ------------------------~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 131 (334)
T cd07855 77 ------------------------GADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHR 131 (334)
T ss_pred ------------------------CCCCceEEEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 0012345799999975 666553221 12223344555778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHH--HH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARF--AI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|+||+||+++.+|.++|+|||++..+...... .. ........+..||.+. ..+..+.++|+|++|+.+++++.
T Consensus 132 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~----~~~~~~~~~Di~slG~~l~el~~ 207 (334)
T cd07855 132 DLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLL----SLPEYTTAIDMWSVGCIFAEMLG 207 (334)
T ss_pred CCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhc----CCcccccccchHHHHHHHHHHHc
Confidence 99999999999999999999998765332110 00 0011112233344331 22345788999999999999987
Q ss_pred HhccCCCCcCc
Q 012411 370 DALNSSVSELN 380 (464)
Q Consensus 370 ~~~~~~~~~~~ 380 (464)
+ ..++...+
T Consensus 208 g--~~pf~~~~ 216 (334)
T cd07855 208 R--RQLFPGKN 216 (334)
T ss_pred C--CCccCCCC
Confidence 4 34444443
No 294
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.83 E-value=2.6e-20 Score=182.18 Aligned_cols=132 Identities=11% Similarity=0.101 Sum_probs=85.8
Q ss_pred eEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH
Q 012411 245 VLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR 323 (464)
Q Consensus 245 ~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~ 323 (464)
+++||++.+ ++.+..... ..+......+..++..++.|+|+.|++||||||+|||+++++.++|+|||+++.+.....
T Consensus 103 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~ 181 (294)
T PHA02882 103 FILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGK 181 (294)
T ss_pred EEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCc
Confidence 677777644 333332111 112222334567788899999999999999999999999999999999999987632211
Q ss_pred H-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcC
Q 012411 324 F-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSEL 379 (464)
Q Consensus 324 ~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~ 379 (464)
. ...........+.+..++++.......+.++|+||+|+.+++++++ ..|+...
T Consensus 182 ~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g--~~P~~~~ 236 (294)
T PHA02882 182 HIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGI--KLPWKGF 236 (294)
T ss_pred ccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhC--CCCCCcc
Confidence 0 0000000111233444555555555568889999999999999984 5666555
No 295
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.83 E-value=1.2e-20 Score=180.17 Aligned_cols=196 Identities=13% Similarity=0.067 Sum_probs=123.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|+||.++...+|+.|++|.........- -.. ++.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------~~~------~~~~ 48 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK-------------------------------ERR------DALN 48 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchh-------------------------------HHH------HHHH
Confidence 689999999999999988999999998753211000 000 1112
Q ss_pred HHHHHHHHHHHhCCCCCE-EeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
|...+.++ . ++++ .+...+ ......+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|+
T Consensus 49 e~~~l~~~----~-h~~i~~~~~~~-~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (256)
T cd08221 49 EIVILSLL----Q-HPNIIAYYNHF-MDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI 122 (256)
T ss_pred HHHHHHhC----C-CCCeeEEEeEE-ecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 22222222 1 2221 122222 22456789999999999988754331 223333 3344667789999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|++|+||+++.++.++|+|||.+......... .. ...+.+..++++.......+.+.|+|++|+.++++++
T Consensus 123 ~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~-~~-----~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~ 196 (256)
T cd08221 123 LHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM-AE-----TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT 196 (256)
T ss_pred cccCCChHhEEEeCCCCEEECcCcceEEccccccc-cc-----ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHH
Confidence 99999999999999999999999998766443210 00 0111222233333322234667899999999999998
Q ss_pred HhccCCCCcCc
Q 012411 370 DALNSSVSELN 380 (464)
Q Consensus 370 ~~~~~~~~~~~ 380 (464)
+ ..++...+
T Consensus 197 g--~~~~~~~~ 205 (256)
T cd08221 197 L--KRTFDATN 205 (256)
T ss_pred C--CCCCCCCC
Confidence 4 34444433
No 296
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.83 E-value=5.3e-21 Score=185.29 Aligned_cols=199 Identities=20% Similarity=0.256 Sum_probs=124.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|....+|+.||||+.+..... .+..++.+++ ...|+++..+.+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~----------~l~~~~i~~~~~--------- 65 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQ----------KLRHPNIVRLKE--------- 65 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHH----------hccCCCeeehee---------
Confidence 5799999999999999878999999999755211 0111111111 111222222221
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccC-CCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLL 285 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh 285 (464)
++... ....++||||+++ +|.+.........+.. ..+..++..++.++|
T Consensus 66 ---------------------------~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH 117 (287)
T cd07840 66 ---------------------------IVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH 117 (287)
T ss_pred ---------------------------eEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22111 2567899999986 6666543221233333 345567788999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
..|++|+|++|+||+++++|.++|+|||++...................+..||.+. .....+.+.|+|++|+.++
T Consensus 118 ~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~----~~~~~~~~~Dv~slG~~l~ 193 (287)
T cd07840 118 SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLL----GATRYGPEVDMWSVGCILA 193 (287)
T ss_pred HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeE----ccccCChHHHHHHHHHHHH
Confidence 999999999999999999999999999998876543211111111112233344321 1122467899999999999
Q ss_pred HHHHHhccCCCCcCcHHHHH
Q 012411 366 NFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~ 385 (464)
+++++ ..++...+.....
T Consensus 194 el~t~--~~p~~~~~~~~~~ 211 (287)
T cd07840 194 ELFLG--KPIFQGSTELEQL 211 (287)
T ss_pred HHHhC--CCCCCCCChHHHH
Confidence 99984 3455554433333
No 297
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.83 E-value=5.9e-21 Score=184.84 Aligned_cols=190 Identities=18% Similarity=0.188 Sum_probs=119.3
Q ss_pred cccccceecEEEEEEEcc----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLKY----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~----~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|+||.||+|++.. ++..||||+..+...... ...+...++.+....|+++..+.+
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~------~~~~~~ei~~l~~l~~~~i~~~~~---------- 73 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQH------RSDFEREIEILRTLDHENIVKYKG---------- 73 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHH------HHHHHHHHHHHHhCCCCChheEEe----------
Confidence 679999999999999643 478999999875532200 000000000001111222222111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccC--CCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLL 285 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh 285 (464)
+... ....+++|||++|++|.+.........+.. ..+..++..++.++|
T Consensus 74 ---------------------------~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH 126 (284)
T cd05038 74 ---------------------------VCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG 126 (284)
T ss_pred ---------------------------eeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH
Confidence 1111 235689999999999988754333223333 344567778999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHH--HHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG--HVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
+.|++|+|+||+||+++.++.++|+|||++..+.......... ......+..|+. ...+..+...|+|++|+.
T Consensus 127 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~-----~~~~~~~~~~Di~slG~~ 201 (284)
T cd05038 127 SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPEC-----LRTSKFSSASDVWSFGVT 201 (284)
T ss_pred hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHH-----HccCCCCcccchHHHhhh
Confidence 9999999999999999999999999999998875321110000 000011223332 233445778999999999
Q ss_pred HHHHHHHh
Q 012411 364 LRNFFDDA 371 (464)
Q Consensus 364 l~~~~~~~ 371 (464)
+++++++.
T Consensus 202 l~el~tg~ 209 (284)
T cd05038 202 LYELFTYG 209 (284)
T ss_pred hheeeccC
Confidence 99999844
No 298
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.83 E-value=1e-20 Score=181.25 Aligned_cols=119 Identities=15% Similarity=0.150 Sum_probs=84.9
Q ss_pred CCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCc--------EEEEe
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK--------LAFLD 311 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~--------i~l~D 311 (464)
...++||||++|++|.++........+... .+..++..++.|+|+.|++|+|+||.||+++.++. ++++|
T Consensus 72 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 72 DESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred CCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecc
Confidence 456899999999999887543332334333 34577888999999999999999999999987764 69999
Q ss_pred cCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHHHHHHHH
Q 012411 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 312 FGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||.+....... ...++ +..++++.+.- ...+.+.|+||+|+.+++++.+
T Consensus 152 ~g~~~~~~~~~--~~~~~--------~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 201 (258)
T cd05078 152 PGISITVLPKE--ILLER--------IPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG 201 (258)
T ss_pred cccccccCCch--hcccc--------CCccCchhccCCCCCCchhhHHHHHHHHHHHHcC
Confidence 99987654321 11111 22233333322 2346789999999999999984
No 299
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.83 E-value=3.1e-20 Score=180.88 Aligned_cols=195 Identities=14% Similarity=0.168 Sum_probs=118.9
Q ss_pred cccccceecEEEEEEEc---cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLK---YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~---~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|++|.||+|+.. .+|+.||+|+.+........ ...+.+..|+.
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~-----------------------------~~~~~~~~e~~ 56 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKA-----------------------------KTTEHTRTERQ 56 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcc-----------------------------hHHHHHHHHHH
Confidence 67999999999999974 37899999998643111000 00011111111
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~g 288 (464)
.+.++ .+++.+.-...........++||||++|++|.+..... ..... ...+..++..++.++|+.|
T Consensus 57 ------~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ 125 (290)
T cd05613 57 ------VLEHI----RQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLG 125 (290)
T ss_pred ------HHHhc----ccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 11111 11222211111112234568999999999998764432 22333 3334456788999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++|+|++|.||+++.+++++|+|||++..+................+..||.+.. ..+..+.+.|+|++|+.+++++
T Consensus 126 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~~Dv~slG~~l~~ll 202 (290)
T cd05613 126 IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRG---GDGGHDKAVDWWSMGVLMYELL 202 (290)
T ss_pred eeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccC---CCCCCCccccHHHHHHHHHHHh
Confidence 9999999999999999999999999998764432111100111122333443311 0122467899999999999999
Q ss_pred HHh
Q 012411 369 DDA 371 (464)
Q Consensus 369 ~~~ 371 (464)
++.
T Consensus 203 ~g~ 205 (290)
T cd05613 203 TGA 205 (290)
T ss_pred cCC
Confidence 843
No 300
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.83 E-value=3.2e-20 Score=173.49 Aligned_cols=203 Identities=16% Similarity=0.136 Sum_probs=133.2
Q ss_pred HHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCC---hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHH
Q 012411 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG---IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (464)
Q Consensus 124 ~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~---~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (464)
++++|.-- .+.+|+|++|.|-.+..-.+|.++|||++.+. .+.++-++++++..- -.|+|+.++++-
T Consensus 75 F~d~YkLt-~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~C---------qgh~nilqLief 144 (463)
T KOG0607|consen 75 FEDMYKLT-SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQC---------QGHKNILQLIEF 144 (463)
T ss_pred HHHHHHhH-HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHh---------cCCccHHHHHHH
Confidence 45554433 47899999999999998889999999998532 222222222222111 125666666665
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHH
Q 012411 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQC 279 (464)
Q Consensus 201 ~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~ 279 (464)
|++ . +..|||||-+.||+|...+..+ ......+..+...|.+
T Consensus 145 FEd------------------------d-------------~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~ 187 (463)
T KOG0607|consen 145 FED------------------------D-------------TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIAS 187 (463)
T ss_pred hcc------------------------c-------------ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHH
Confidence 443 2 5567999999999987654432 2334455566778889
Q ss_pred HHHHHHHCCcccCCCCCcceEEccCCc---EEEEecCCCCcCCHHHHHHHHHHH-HHHHhcCHHHHHHHHHH-----cCC
Q 012411 280 SLRQLLEYGYFHADPHPGNLLATPEGK---LAFLDFGMMSETPEEARFAIIGHV-VHMVNRDYEAMARDYYA-----LDF 350 (464)
Q Consensus 280 ~l~~lh~~gi~H~Dlkp~Nili~~~g~---i~l~DFGl~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~g~ 350 (464)
+|.+||.+||.|||+||+|||..+..+ |||+||-+...+....--+.+.+. +..-.++.|.|++++.. .-+
T Consensus 188 aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~ 267 (463)
T KOG0607|consen 188 ALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATF 267 (463)
T ss_pred HHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhcccccc
Confidence 999999999999999999999975544 899999887654221100000000 01112344555554432 235
Q ss_pred CCCCCCcchHHHHHHHHHHHhcc
Q 012411 351 LSPDVDVTPIVPALRNFFDDALN 373 (464)
Q Consensus 351 ~~~~~D~~sl~~~l~~~~~~~~~ 373 (464)
++...|.||+|..+|-|+.+|.+
T Consensus 268 YDKrCDlwSLGvIlYImLsGYpP 290 (463)
T KOG0607|consen 268 YDKRCDLWSLGVILYIMLSGYPP 290 (463)
T ss_pred ccccccHHHHHHHHHHHHhCCCC
Confidence 67889999999999999997643
No 301
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.83 E-value=1.2e-20 Score=181.12 Aligned_cols=201 Identities=16% Similarity=0.116 Sum_probs=121.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||||+.+......- ....+ +. +..
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~--~~~~~--------------------------~~------~~~ 53 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPE--TSKEV--------------------------NA------LEC 53 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcc--cHHHH--------------------------HH------HHH
Confidence 679999999999999988899999998753211100 00000 01 122
Q ss_pred HHHHHHHHHHHhCCCCCEE-eceeecc-CCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVL-VPDIFWD-YTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~-vP~v~~~-~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|+..+.++. ++++. ....+.+ .....+++|||++|++|.+...... ........+..++..++.++|+.|++
T Consensus 54 E~~~l~~l~-----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 128 (265)
T cd06652 54 EIQLLKNLL-----HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIV 128 (265)
T ss_pred HHHHHHhcC-----CCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 222222221 12211 1111111 1234579999999999987643221 12223334456778899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|++|.||++++++.++|+|||++..+....... .+. ....+....++++.+.....+.++|+|++|+.+++++++
T Consensus 129 H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~-~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g 205 (265)
T cd06652 129 HRDIKGANILRDSVGNVKLGDFGASKRLQTICLSG-TGM--KSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTE 205 (265)
T ss_pred cCCCCHHHEEecCCCCEEECcCccccccccccccc-ccc--ccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhC
Confidence 99999999999999999999999987653211000 000 000111122333333333457789999999999999983
Q ss_pred hccCCCCc
Q 012411 371 ALNSSVSE 378 (464)
Q Consensus 371 ~~~~~~~~ 378 (464)
..|+..
T Consensus 206 --~~p~~~ 211 (265)
T cd06652 206 --KPPWAE 211 (265)
T ss_pred --CCCCCc
Confidence 345443
No 302
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.83 E-value=1.2e-20 Score=179.56 Aligned_cols=245 Identities=13% Similarity=0.133 Sum_probs=145.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+..+|+.||+|+........ .+. ..+....+.+....|+++..+.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~---~~~~~e~~~l~~l~~~~~~~~~~-------------- 66 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE--KER---EDALNEVKILKKLNHPNIIKYYE-------------- 66 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh--HHH---HHHHHHHHHHHhcCCCChhheEE--------------
Confidence 67999999999999998889999999986432110 000 00000000001111222222111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---cCCCHH--HHHHHHHHHHHHHHHHCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVL--DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~--~~~~~~i~~~l~~lh~~g 288 (464)
........+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|
T Consensus 67 -----------------------~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 123 (258)
T cd08215 67 -----------------------SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK 123 (258)
T ss_pred -----------------------EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 1112256689999999999987654322 233333 334566777999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++|+|++|.||++++++.++|+|||.+........ ... ...+.+..++++.......+.+.|+|++|+.+++++
T Consensus 124 ~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~~~----~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 197 (258)
T cd08215 124 ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD--LAK----TVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELC 197 (258)
T ss_pred EecccCChHHeEEcCCCcEEECCccceeecccCcc--eec----ceeeeecccChhHhccCCCCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999887644320 000 011222233333333344577899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHhhhHHHHHHhcCCCCHHHHH
Q 012411 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRD 448 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~ 448 (464)
.+ ..++...+...+...+. ......+|. ........++.+++ ..+|..||
T Consensus 198 ~g--~~p~~~~~~~~~~~~~~---~~~~~~~~~-----------------------~~~~~~~~~i~~~l--~~~p~~Rp 247 (258)
T cd08215 198 TL--KHPFEGENLLELALKIL---KGQYPPIPS-----------------------QYSSELRNLVSSLL--QKDPEERP 247 (258)
T ss_pred cC--CCCCCCCcHHHHHHHHh---cCCCCCCCC-----------------------CCCHHHHHHHHHHc--CCChhhCc
Confidence 73 44554444333332221 111111111 12233455555544 56788888
Q ss_pred HHHHHhcc
Q 012411 449 ALVELLFK 456 (464)
Q Consensus 449 ~~~~~l~~ 456 (464)
++.++|..
T Consensus 248 ~~~~ll~~ 255 (258)
T cd08215 248 SIAQILQS 255 (258)
T ss_pred CHHHHhcC
Confidence 88887753
No 303
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.83 E-value=7.5e-21 Score=182.97 Aligned_cols=203 Identities=18% Similarity=0.217 Sum_probs=124.0
Q ss_pred cccccceecEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|+||.||+|.++.+|. .||+|..++....... +.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------------~~------ 51 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR--------------------------------RD------ 51 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH--------------------------------HH------
Confidence 689999999999999864443 7999988754321100 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~g 288 (464)
+..|...+.++ .+..-+.+...+ ......+++|||++|++|.+.........+.. ..+..++..++.++|+.|
T Consensus 52 ~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 126 (267)
T cd05066 52 FLSEASIMGQF----DHPNIIHLEGVV-TKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG 126 (267)
T ss_pred HHHHHHHHHhC----CCCCcceEEEEE-ecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11111111111 111111222222 23456789999999999988754332223433 334467778999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++|+|+||+||+++.+++++|+|||++..+......... ... .......++++....+..+.+.|+|++|+.+++++
T Consensus 127 i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~--~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell 203 (267)
T cd05066 127 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT-TRG--GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 203 (267)
T ss_pred EeehhhchhcEEECCCCeEEeCCCCcccccccccceeee-cCC--CccceeecCHhHhccCccCchhhhHHHHHHHHHHh
Confidence 999999999999999999999999999876432111000 000 00001122333333445678899999999999987
Q ss_pred HHhccCCCCcCcHHH
Q 012411 369 DDALNSSVSELNFKT 383 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~ 383 (464)
. ....++...+..+
T Consensus 204 ~-~g~~p~~~~~~~~ 217 (267)
T cd05066 204 S-YGERPYWEMSNQD 217 (267)
T ss_pred c-CCCCCcccCCHHH
Confidence 5 1334554444333
No 304
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.83 E-value=4e-20 Score=176.10 Aligned_cols=197 Identities=14% Similarity=0.117 Sum_probs=128.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||++....+|+.+|+|+.......... ....++. +..+....|+++..+.+.+.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-~~~~~~e----~~~l~~l~~~~i~~~~~~~~----------- 69 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKE-REDAVNE----IRILASVNHPNIISYKEAFL----------- 69 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHH-HHHHHHH----HHHHHhCCCCCchhhhhhhc-----------
Confidence 6799999999999999889999999998643211100 0011111 11112223555555444322
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---cCCCHHH--HHHHHHHHHHHHHHHCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---QGLKVLD--LVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---~~~~~~~--~~~~~i~~~l~~lh~~g 288 (464)
.....++||||++|++|.+...... ...+... .+..++..++.++|+.|
T Consensus 70 --------------------------~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~ 123 (256)
T cd08530 70 --------------------------DGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK 123 (256)
T ss_pred --------------------------cCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 1245689999999999988643311 2233333 34456778999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
++|+|++|.||+++.++.++|+|||++........... .+++..++++.......+.+.|+|++|+.+++++
T Consensus 124 i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~--------~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~ 195 (256)
T cd08530 124 ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQ--------IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMA 195 (256)
T ss_pred cccCCCCcceEEEecCCcEEEeeccchhhhccCCcccc--------cCCccccCHHHHCCCCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999877654311111 1122233333333344567899999999999998
Q ss_pred HHhccCCCCcCcHH
Q 012411 369 DDALNSSVSELNFK 382 (464)
Q Consensus 369 ~~~~~~~~~~~~~~ 382 (464)
.+ ..|+...+..
T Consensus 196 ~g--~~p~~~~~~~ 207 (256)
T cd08530 196 TF--APPFEARSMQ 207 (256)
T ss_pred hC--CCCCCCCCHH
Confidence 74 3455554443
No 305
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.83 E-value=1e-20 Score=181.90 Aligned_cols=203 Identities=16% Similarity=0.104 Sum_probs=124.1
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.||+|++|.||+|.+..+|..|++|+.......... .+.. .. +.
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~--~~~~--------------------------~~------~~ 52 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPET--SKEV--------------------------SA------LE 52 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchh--HHHH--------------------------HH------HH
Confidence 37899999999999999878999999987643211000 0000 01 11
Q ss_pred HHHHHHHHHHHHhCCCCCE-EeceeeccC-CCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCc
Q 012411 213 QEGQNARRFKKLYADKEDV-LVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi 289 (464)
.|...+.++ . ++++ .+...+... ....+++|||++|++|.+...... ........+..++..++.++|+.|+
T Consensus 53 ~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i 127 (266)
T cd06651 53 CEIQLLKNL----Q-HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMI 127 (266)
T ss_pred HHHHHHHHc----C-CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 222222221 1 1222 111222221 234579999999999987643221 1222233455778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|++|+||+++.++.++|+|||++..+......... . ....+....++++.......+.+.|+|++|+.++++++
T Consensus 128 ~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~--~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~ 204 (266)
T cd06651 128 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTG--I-RSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT 204 (266)
T ss_pred eeCCCCHHHEEECCCCCEEEccCCCccccccccccCCc--c-ccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHH
Confidence 99999999999999999999999998765432110000 0 00111222333444333445678999999999999998
Q ss_pred HhccCCCCcC
Q 012411 370 DALNSSVSEL 379 (464)
Q Consensus 370 ~~~~~~~~~~ 379 (464)
+ ..|+...
T Consensus 205 g--~~pf~~~ 212 (266)
T cd06651 205 E--KPPWAEY 212 (266)
T ss_pred C--CCCcccc
Confidence 4 3455433
No 306
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.83 E-value=1.2e-20 Score=183.56 Aligned_cols=189 Identities=19% Similarity=0.162 Sum_probs=115.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||++.+..+|+.||||.......... .. .+..
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~--------------------------------~~------~~~~ 51 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKE--------------------------------QK------RLLM 51 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHH--------------------------------HH------HHHH
Confidence 579999999999999988899999998764321100 00 1111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHH---HH-hcCCCH--HHHHHHHHHHHHHHHH
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVA---IE-SQGLKV--LDLVNTGIQCSLRQLL 285 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~---~~-~~~~~~--~~~~~~~i~~~l~~lh 285 (464)
|...+.++ .++++ +++++. ......+++|||+++ ++.+... .. ....+. ...+..++..+++|+|
T Consensus 52 e~~~l~~~----~~~~~--iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh 124 (288)
T cd06616 52 DLDVVMRS----SDCPY--IVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK 124 (288)
T ss_pred HHHHHHHh----cCCCC--EeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 21111111 11222 222221 223566899999875 4433211 11 122333 3344566778999999
Q ss_pred H-CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcC---CCCCCCCcchH
Q 012411 286 E-YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALD---FLSPDVDVTPI 360 (464)
Q Consensus 286 ~-~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~D~~sl 360 (464)
+ .|++|+|+||+||+++.++.++|+|||++..+..... ....+ ...+..||.+ ..+ ..+.++|+|++
T Consensus 125 ~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~---~~~y~aPE~~-----~~~~~~~~~~~~Di~sl 196 (288)
T cd06616 125 EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAG---CRPYMAPERI-----DPSARDGYDVRSDVWSL 196 (288)
T ss_pred hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccC---ccCccCHHHh-----ccccccCCcchhhhhHH
Confidence 7 5999999999999999999999999999875432210 00111 1122334433 222 45778999999
Q ss_pred HHHHHHHHHHhccCCCC
Q 012411 361 VPALRNFFDDALNSSVS 377 (464)
Q Consensus 361 ~~~l~~~~~~~~~~~~~ 377 (464)
|+.+++++++ ..|+.
T Consensus 197 G~il~el~~g--~~p~~ 211 (288)
T cd06616 197 GITLYEVATG--KFPYP 211 (288)
T ss_pred HHHHHHHHhC--CCCch
Confidence 9999999984 34444
No 307
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.83 E-value=1.2e-19 Score=179.10 Aligned_cols=174 Identities=14% Similarity=0.100 Sum_probs=107.6
Q ss_pred CCCceEEEeeecCcccCcHHHHHh---------------cCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEcc
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIES---------------QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATP 303 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~ 303 (464)
....+++|||++|++|.++..... ...... ..+..++..++.|+|+.|++|+|+||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 355789999999999988754321 112222 234567888999999999999999999999999
Q ss_pred CCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHH
Q 012411 304 EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKT 383 (464)
Q Consensus 304 ~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (464)
+++++|+|||+++.+......... ......+..++++....+..+.++|+|++|+.++++++. ...|+...+..+
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~-g~~p~~~~~~~~ 244 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYYKKT----SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTL-GGSPYPGIPVEE 244 (314)
T ss_pred CCcEEEcccccccccccccccccc----ccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhC-CCCCCCCCCHHH
Confidence 999999999999876432111000 000011123334444445567889999999999999872 224555555444
Q ss_pred HHHHHHHHH-hhCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 384 IVDGLGAVL-YQYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 384 ~~~~l~~~~-~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
+...+.... ...+...|..+..+++.+ ...||+-|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~l~~li~~c-------l~~~p~~Rp 281 (314)
T cd05099 245 LFKLLREGHRMDKPSNCTHELYMLMREC-------WHAVPTQRP 281 (314)
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHH-------cCCCcccCc
Confidence 443332110 012223344444444443 455665554
No 308
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.83 E-value=1.7e-20 Score=180.53 Aligned_cols=187 Identities=15% Similarity=0.092 Sum_probs=119.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..||+|++|.||+|.+..++..|++|........... .+ ...+..+....|++++.+++.
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~----~~---~~e~~~l~~l~h~~iv~~~~~------------- 73 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQ----PL---HEEIALHSYLKHRNIVQYLGS------------- 73 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHH----HH---HHHHHHHHhcCCCCeeeeeee-------------
Confidence 5799999999999998878999999988654322110 00 000001111123333332221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCC--CH--HHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL--KV--LDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~--~~--~~~~~~~i~~~l~~lh~~gi 289 (464)
.......+++|||++|++|.+......... +. ...+..++..++.++|+.|+
T Consensus 74 ------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 129 (268)
T cd06624 74 ------------------------DSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI 129 (268)
T ss_pred ------------------------eccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE
Confidence 112345689999999999988754332222 22 23345678889999999999
Q ss_pred ccCCCCCcceEEcc-CCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC--CCCCCCcchHHHHHHH
Q 012411 290 FHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF--LSPDVDVTPIVPALRN 366 (464)
Q Consensus 290 ~H~Dlkp~Nili~~-~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~D~~sl~~~l~~ 366 (464)
+|+|+||.||+++. ++.++|+|||++..+....... ....+.+..++++.+..+. .+.++|+|++|+.+++
T Consensus 130 ~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~ 203 (268)
T cd06624 130 VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT------ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVE 203 (268)
T ss_pred eecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc------ccCCCCccccChhhhccccccCCchhhhHHHHHHHHH
Confidence 99999999999976 6789999999987653221100 0001122233333332221 4678999999999999
Q ss_pred HHHH
Q 012411 367 FFDD 370 (464)
Q Consensus 367 ~~~~ 370 (464)
++++
T Consensus 204 l~~g 207 (268)
T cd06624 204 MATG 207 (268)
T ss_pred HHhC
Confidence 9984
No 309
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.83 E-value=2.7e-20 Score=185.53 Aligned_cols=203 Identities=18% Similarity=0.204 Sum_probs=124.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|++..+|+.||||+..+....... ...++. +..+....|+|++.+.+.+...
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~--~~~~~E----~~~l~~l~h~niv~~~~~~~~~--------- 75 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFC--QRTLRE----IKILRRFKHENIIGILDIIRPP--------- 75 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhH--HHHHHH----HHHHHhCCCCCcCchhheeecc---------
Confidence 7899999999999999889999999998653211110 011111 1112223356655554321100
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
- .......+++|||+++ ++.+..............+..++..++.++|+.|++|+|
T Consensus 76 ----------------------~-~~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~d 131 (336)
T cd07849 76 ----------------------S-FESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRD 131 (336)
T ss_pred ----------------------c-ccccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 0 0011345899999976 555442222222233344556788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHH-H-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARF-A-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+||+||+++.++.++|+|||++......... . .........+..||.+ ......+.++|+|++|+.+++++++
T Consensus 132 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~~DvwslGvil~el~~G- 206 (336)
T cd07849 132 LKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIM----LNSKGYTKAIDIWSVGCILAEMLSN- 206 (336)
T ss_pred CCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHh----hCCCCCCcHHHHHHHHHHHHHHHhC-
Confidence 9999999999999999999998765432110 0 0000111122334432 1223346789999999999999984
Q ss_pred ccCCCCcCcH
Q 012411 372 LNSSVSELNF 381 (464)
Q Consensus 372 ~~~~~~~~~~ 381 (464)
..++...+.
T Consensus 207 -~~~f~~~~~ 215 (336)
T cd07849 207 -RPLFPGKDY 215 (336)
T ss_pred -CCCCCCCCH
Confidence 345544443
No 310
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.83 E-value=1.7e-20 Score=179.68 Aligned_cols=128 Identities=13% Similarity=0.170 Sum_probs=87.4
Q ss_pred CCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcC
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
.+..+++|||+.+++|.++............ .+..++..++.++|+.|++|+|+||+||++++++.++|+|||++..+
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccc
Confidence 3456899999999999887543222223332 23457888999999999999999999999999999999999998765
Q ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 319 PEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
........... ......+..++++.+..+..+.++|+|++|+.+++++++
T Consensus 149 ~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~ 198 (262)
T cd05058 149 YDKEYYSVHNH--TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 198 (262)
T ss_pred cCCcceeeccc--ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcC
Confidence 43211000000 000111223344444444457789999999999999873
No 311
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.83 E-value=9.1e-21 Score=182.49 Aligned_cols=203 Identities=17% Similarity=0.235 Sum_probs=125.5
Q ss_pred cccccceecEEEEEEEccCCc---EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLKYSGQ---IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~---~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|++|.||+|.+..+|. .||||+.......... ..
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------------~~------ 51 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR--------------------------------RD------ 51 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH--------------------------------HH------
Confidence 679999999999999876664 5999998654221100 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~g 288 (464)
|..|...+.++ +++++.-..-+.......++||||++|++|.+.........+... .+..++..++.++|+.|
T Consensus 52 ~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g 126 (269)
T cd05065 52 FLSEASIMGQF-----DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN 126 (269)
T ss_pred HHHHHHHHHhC-----CCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 11122211111 112221111122234567899999999999887543333334433 34466778999999999
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHH-HHHHHHH---HHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVV---HMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
++|+|+||.||+++.++.++|+|||++..+...... ....... ...+..|| ....+..+.++|+|++|+.+
T Consensus 127 ~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE-----~~~~~~~~~~~DvwslG~~l 201 (269)
T cd05065 127 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPE-----AIAYRKFTSASDVWSYGIVM 201 (269)
T ss_pred EeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHh-----HhccCcccchhhhhhhHHHH
Confidence 999999999999999999999999998765432111 0111000 11223344 33344457789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHH
Q 012411 365 RNFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~ 385 (464)
++++. ....|+...+..++.
T Consensus 202 ~e~l~-~g~~p~~~~~~~~~~ 221 (269)
T cd05065 202 WEVMS-YGERPYWDMSNQDVI 221 (269)
T ss_pred HHHhc-CCCCCCCCCCHHHHH
Confidence 99875 133455554444333
No 312
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.83 E-value=2.4e-20 Score=180.42 Aligned_cols=197 Identities=22% Similarity=0.272 Sum_probs=125.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.+++|.......... ......+.+ ..+....|+++..+.+.+.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~----~~l~~l~~~~i~~~~~~~~----------- 68 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG-IPKTALREI----KLLKELNHPNIIKLLDVFR----------- 68 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccch-hHHHHHHHH----HHHHHhcCCCcchHHHhhc-----------
Confidence 579999999999999988899999999865432210 000011111 1111122455544444321
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
..+..+++|||+++ ++.+.........+ ....+..++..++.++|..|++|
T Consensus 69 --------------------------~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 121 (283)
T cd05118 69 --------------------------HKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILH 121 (283)
T ss_pred --------------------------cCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 12456799999987 66655333222333 33345577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||.||+++.++.++|+|||.+......... .........+..||.+.. ....+.++|+|++|+.+++++++.
T Consensus 122 ~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~----~~~~~~~~Di~slG~~l~~l~tg~ 196 (283)
T cd05118 122 RDLKPENLLINTEGVLKLADFGLARSFGSPVRP-YTHYVVTRWYRAPELLLG----DKGYSTPVDIWSVGCIFAELLSRR 196 (283)
T ss_pred cCcCHHHEEECCCCcEEEeeeeeeEecCCCccc-ccCccCcccccCcHHHhc----CCCCCchhHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998776544311 111111122334554321 114577899999999999999853
Q ss_pred ccCCCCcCc
Q 012411 372 LNSSVSELN 380 (464)
Q Consensus 372 ~~~~~~~~~ 380 (464)
.++...+
T Consensus 197 --~~~~~~~ 203 (283)
T cd05118 197 --PLFPGKS 203 (283)
T ss_pred --CCCCCCC
Confidence 4444333
No 313
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.83 E-value=4.1e-21 Score=189.42 Aligned_cols=188 Identities=17% Similarity=0.198 Sum_probs=113.5
Q ss_pred CCcccccceecEEEEEEEcc--CCcEEEEEEecCChH-HHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 132 SPSPIAAASLGQVYKAQLKY--SGQIVAVKVQRPGIE-EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 132 ~~~pig~Gs~gqV~~a~~~~--~g~~VAVKv~~p~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+...||+|+||.||+|+.+. ++..||+|....... .....++.+++ ...|+|++
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~----------~l~h~niv------------- 61 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLR----------ELKHPNVI------------- 61 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHH----------hCCCCCee-------------
Confidence 34679999999999999753 457899998864311 11111111111 11122222
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeec-cCCCCceEEEeeecCcccCcHHHHHh--------cCCCH--HHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEWVEGVKLNEQVAIES--------QGLKV--LDLVNTGI 277 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~~~G~~L~~~~~~~~--------~~~~~--~~~~~~~i 277 (464)
.+..++. ......+++|||+++ ++.+...... ..++. ...+..++
T Consensus 62 -----------------------~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 117 (317)
T cd07867 62 -----------------------ALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQI 117 (317)
T ss_pred -----------------------eEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHH
Confidence 2222222 123456899999986 5544332111 11222 23455778
Q ss_pred HHHHHHHHHCCcccCCCCCcceEE----ccCCcEEEEecCCCCcCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 278 QCSLRQLLEYGYFHADPHPGNLLA----TPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 278 ~~~l~~lh~~gi~H~Dlkp~Nili----~~~g~i~l~DFGl~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
..++.++|+.|++|+|+||+||++ +.++.++|+|||+++.+...... .......+..+..||.+. .....
T Consensus 118 ~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~----~~~~~ 193 (317)
T cd07867 118 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL----GARHY 193 (317)
T ss_pred HHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhc----CCCcc
Confidence 889999999999999999999999 45678999999999876433211 011111112233344321 12235
Q ss_pred CCCCCcchHHHHHHHHHHH
Q 012411 352 SPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~~ 370 (464)
+.++|+||+|+.+++++++
T Consensus 194 ~~~~DiwSlG~il~el~tg 212 (317)
T cd07867 194 TKAIDIWAIGCIFAELLTS 212 (317)
T ss_pred CcHHHHHhHHHHHHHHHhC
Confidence 7789999999999999984
No 314
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.83 E-value=1.7e-19 Score=175.25 Aligned_cols=187 Identities=18% Similarity=0.200 Sum_probs=123.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|+|++|+||+|.+..+++.|++|+....... .+.+..|++
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----------------------------------~~~~~~e~~--- 67 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQN----------------------------------KELIINEIL--- 67 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCchh----------------------------------HHHHHHHHH---
Confidence 6899999999999999888999999998754220 011111111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
.+.++ . ++++.-..-+.......+++|||++|++|.++........+.. ..+..++..++.++|..|++|
T Consensus 68 ---~l~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H 139 (286)
T cd06614 68 ---IMKDC----K-HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIH 139 (286)
T ss_pred ---HHHHC----C-CCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 11111 1 1222211112223467799999999999998865442133433 334567778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|++|+||+++.+|.++|+|||.+.......... ....+.+..++++...-+..+.+.|+|++|+.+++++++.
T Consensus 140 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~ 213 (286)
T cd06614 140 RDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR------NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE 213 (286)
T ss_pred CCCChhhEEEcCCCCEEECccchhhhhccchhhh------ccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCC
Confidence 9999999999999999999999887654332110 0011122223333333344577899999999999999843
No 315
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.83 E-value=2.5e-20 Score=179.10 Aligned_cols=120 Identities=18% Similarity=0.107 Sum_probs=84.2
Q ss_pred CCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCc-------EEEEe
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGK-------LAFLD 311 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~-------i~l~D 311 (464)
....+++|||++|++|..+........+.. ..+..++..++.|+|+.|++|+|+||.|||++.++. ++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 356789999999999877644322223333 345577888999999999999999999999987664 89999
Q ss_pred cCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 312 FGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
||++..+.... ...+ ...+..||.+. ..+..+.++|+|++|+.+++++.
T Consensus 156 ~g~~~~~~~~~--~~~~---~~~y~aPE~~~----~~~~~~~~~DiwslG~~l~el~~ 204 (262)
T cd05077 156 PGIPITVLSRQ--ECVE---RIPWIAPECVE----DSKNLSIAADKWSFGTTLWEICY 204 (262)
T ss_pred CCCCccccCcc--cccc---cccccChhhhc----CCCCCCchhHHHHHHHHHHHHHh
Confidence 99987653221 1111 12233444321 12345678999999999999974
No 316
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.83 E-value=9.3e-22 Score=180.23 Aligned_cols=215 Identities=19% Similarity=0.209 Sum_probs=126.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
.-+|+|+.|+|++++.+.+|...|||..+..-... .+++ +...+|..
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nke------e~kR--------------------------ILmDldvv- 144 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKE------ENKR--------------------------ILMDLDVV- 144 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHH------HHHH--------------------------HHHhhhHH-
Confidence 45999999999999999899999999987542210 0111 11111110
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHH---HHHHHHHHHHHHH-CCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLV---NTGIQCSLRQLLE-YGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~---~~~i~~~l~~lh~-~gi 289 (464)
. ...+.+++.----|.-..+..++.||.+.. -.+.+...-..++ +.+++ ...+..||.||-+ +|+
T Consensus 145 --------~-~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~pi-PE~ilGk~tva~v~AL~YLKeKH~v 213 (391)
T KOG0983|consen 145 --------L-KSHDCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKGPI-PERILGKMTVAIVKALYYLKEKHGV 213 (391)
T ss_pred --------h-hccCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCCc-hHHhhhhhHHHHHHHHHHHHHhcce
Confidence 0 001122222111122234555677887743 3333332222222 22333 2334457888874 799
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
+|||+||+|||++..|+|||+|||+++++.+... ...+|...+| .||.+-..- ..-++-.+|+||||..+.++.
T Consensus 214 iHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YM---aPERidp~~--~~kYDiRaDVWSlGITlveLa 288 (391)
T KOG0983|consen 214 IHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYM---APERIDPPD--KPKYDIRADVWSLGITLVELA 288 (391)
T ss_pred eecccCccceEEccCCCEEeecccccceeecccccccccCCcccc---CccccCCCC--CCccchhhhhhhhccchhhhh
Confidence 9999999999999999999999999999865532 2233333333 344332110 111244579999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHHHHHHhhCCCCCCh
Q 012411 369 DDALNSSVSELNFKTIVDGLGAVLYQYPFNVPA 401 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~ 401 (464)
++.++.+.-+.+|. .+.+++.+.|..+|+
T Consensus 289 Tg~yPy~~c~tdFe----~ltkvln~ePP~L~~ 317 (391)
T KOG0983|consen 289 TGQYPYKGCKTDFE----VLTKVLNEEPPLLPG 317 (391)
T ss_pred cccCCCCCCCccHH----HHHHHHhcCCCCCCc
Confidence 97666555445553 345555566655554
No 317
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.83 E-value=9.1e-20 Score=176.07 Aligned_cols=200 Identities=15% Similarity=0.145 Sum_probs=123.5
Q ss_pred cccccceecEEEEEEEccC-----CcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYS-----GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~-----g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|.++.. +..||+|....+..... .
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~--------------------------------------~ 53 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRE--------------------------------------R 53 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHH--------------------------------------H
Confidence 6799999999999998633 37899999764421110 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhcC---------CCH--HHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQG---------LKV--LDLVNT 275 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~~---------~~~--~~~~~~ 275 (464)
..+..|...+.. +. ++++ .+++. ......+++|||+++++|.+........ ... ...+..
T Consensus 54 ~~~~~e~~~l~~----~~-~~~i--~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (277)
T cd05032 54 IEFLNEASVMKE----FN-CHHV--VRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAA 126 (277)
T ss_pred HHHHHHHHHHHh----CC-CCce--eEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHH
Confidence 011122222111 11 1221 12222 2235679999999999998875422110 122 223446
Q ss_pred HHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHcCCCCCC
Q 012411 276 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIG-HVVHMVNRDYEAMARDYYALDFLSPD 354 (464)
Q Consensus 276 ~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (464)
++..++.|+|+.|++|+|++|+||+++.+|.++|+|||+++.+.........+ ......+..|| ....+..+.+
T Consensus 127 ~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~ 201 (277)
T cd05032 127 EIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE-----SLKDGVFTTK 201 (277)
T ss_pred HHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHH-----HHhcCCCCcc
Confidence 77789999999999999999999999999999999999987653321100000 00011223344 3345566888
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcCcHHHH
Q 012411 355 VDVTPIVPALRNFFDDALNSSVSELNFKTI 384 (464)
Q Consensus 355 ~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~ 384 (464)
+|+|++|+.++++++. ...++...+..+.
T Consensus 202 ~Di~slG~il~el~t~-g~~p~~~~~~~~~ 230 (277)
T cd05032 202 SDVWSFGVVLWEMATL-AEQPYQGLSNEEV 230 (277)
T ss_pred cchHHHHHHHHHhhcc-CCCCCccCCHHHH
Confidence 9999999999999872 2234444443333
No 318
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.83 E-value=3.2e-20 Score=180.05 Aligned_cols=185 Identities=22% Similarity=0.289 Sum_probs=119.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
++||+|++|+||+|++..+|+.||||.++..... .+..+++++ ....|+|++++++.+.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l----------~~l~h~~i~~~~~~~~------ 69 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL----------KELNHPNIVKLLDVIH------ 69 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHH----------HhcCCCCCcchhhhcc------
Confidence 6899999999999999888999999988643211 111222222 2234666666555332
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLL 285 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh 285 (464)
.....++||||+.+ +|.+...... ...+.. ..+..++..++.|+|
T Consensus 70 -------------------------------~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh 117 (284)
T cd07860 70 -------------------------------TENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH 117 (284)
T ss_pred -------------------------------cCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12456799999975 6665533221 223333 344566778999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
+.|++|+|++|+||+++.++.++|+|||++..+......... ......+..||... .....+.+.|+|++|+.++
T Consensus 118 ~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~y~aPE~~~----~~~~~~~~~Dv~slG~il~ 192 (284)
T cd07860 118 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAPEILL----GCKYYSTAVDIWSLGCIFA 192 (284)
T ss_pred HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc-ccccccccCCeEEe----cCCCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999998765332111000 00011122233211 1122356789999999999
Q ss_pred HHHHHh
Q 012411 366 NFFDDA 371 (464)
Q Consensus 366 ~~~~~~ 371 (464)
+++++.
T Consensus 193 ~l~tg~ 198 (284)
T cd07860 193 EMVTRR 198 (284)
T ss_pred HHHHCC
Confidence 999853
No 319
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.83 E-value=5.7e-21 Score=190.66 Aligned_cols=214 Identities=19% Similarity=0.216 Sum_probs=154.4
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.||+|-||.||.+... .+..||||..+|+.......|+ +++++. +...+|||+++++..+..
T Consensus 543 ~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F--~kEIki----LsqLkhPNIveLvGVC~~--------- 606 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDF--LKEIKI----LSRLKHPNIVELLGVCVQ--------- 606 (807)
T ss_pred hhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHH--HHHHHH----HhccCCCCeeEEEeeeec---------
Confidence 378999999999999986 6799999999998554432221 111111 112245666555553321
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCC-C--HHHHHHHHHHHHHHHHHHCCc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL-K--VLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~-~--~~~~~~~~i~~~l~~lh~~gi 289 (464)
..+.+++|||++.|+|.++........ + ...-+..+|.++++||-+.+|
T Consensus 607 ----------------------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nf 658 (807)
T KOG1094|consen 607 ----------------------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNF 658 (807)
T ss_pred ----------------------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhch
Confidence 256689999999999998755443222 1 223356889999999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|||+-+.|+|++.++++||+||||++.+-.......- +-+--...+++.+-+-+|-.+.+.|+|++|.+++|++.
T Consensus 659 VHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq----gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~ 734 (807)
T KOG1094|consen 659 VHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ----GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFM 734 (807)
T ss_pred hhccccccceeecCcccEEecCcccccccccCCceeee----cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHH
Confidence 99999999999999999999999999966332111100 00111234455555668888999999999999999999
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhh
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLYQ 394 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~ 394 (464)
.+...|+++.+-.++++..+.....
T Consensus 735 ~C~e~Py~~lt~e~vven~~~~~~~ 759 (807)
T KOG1094|consen 735 LCREQPYSQLTDEQVVENAGEFFRD 759 (807)
T ss_pred HHhhCchhhhhHHHHHHhhhhhcCC
Confidence 9999999999888888888776653
No 320
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.83 E-value=1.7e-21 Score=204.37 Aligned_cols=124 Identities=17% Similarity=0.149 Sum_probs=84.0
Q ss_pred CCCceEEEeeecCcccCcHHHHHhcC------CCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCC
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQG------LKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGM 314 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl 314 (464)
....+++||++.+ ++.+........ ......+..++..+|.|||+.||+||||||+|||++.+|.++|+|||+
T Consensus 235 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGl 313 (501)
T PHA03210 235 EANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGT 313 (501)
T ss_pred CCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCC
Confidence 4567899999865 444332211110 112234567788899999999999999999999999999999999999
Q ss_pred CCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 315 MSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 315 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+..+.........+...+..+..||.+ ..+..+.++|+||+|+.+++++++
T Consensus 314 a~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlGvil~ell~~ 364 (501)
T PHA03210 314 AMPFEKEREAFDYGWVGTVATNSPEIL-----AGDGYCEITDIWSCGLILLDMLSH 364 (501)
T ss_pred ceecCcccccccccccCCcCCCCchhh-----cCCCCCcHHHHHHHHHHHHHHHHC
Confidence 987654321111111112333344433 334457789999999999999974
No 321
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.83 E-value=9.6e-21 Score=182.41 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=93.8
Q ss_pred CCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
...+++|||++|++|.+.........+... .+..++..++.++|+.|++|+|+||+||+++.++.++|+|||++..+.
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence 456899999999999887543332334333 345678889999999999999999999999999999999999987764
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHH
Q 012411 320 EEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~ 385 (464)
...... .. ........++++.......+.+.|+|++|+.+++++.. ...|+...+..+..
T Consensus 159 ~~~~~~--~~---~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~pf~~~~~~~~~ 218 (270)
T cd05056 159 DESYYK--AS---KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILML-GVKPFQGVKNNDVI 218 (270)
T ss_pred ccccee--cC---CCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHc-CCCCCCCCCHHHHH
Confidence 431100 00 00011223333443444457789999999999998861 23455555444333
No 322
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.83 E-value=9.2e-20 Score=173.43 Aligned_cols=188 Identities=21% Similarity=0.199 Sum_probs=120.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+.. |+.||+|+.+...... .... +..
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~--------------------------------~~~~------~~~ 41 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPD--------------------------------LKRK------FLQ 41 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHH--------------------------------HHHH------HHH
Confidence 368999999999999984 9999999876432110 0011 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ +++++.....+....+..++||||++|++|.++........+... .+..++..++.++|+.|++|
T Consensus 42 e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h 116 (251)
T cd05041 42 EAEILKQY-----DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIH 116 (251)
T ss_pred HHHHHHhC-----CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeh
Confidence 22211211 223333222233345667999999999999887543333334333 23356667999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|++|.||+++.++.++|+|||++............+. .......++++....+..+.+.|+|++|+.++++++
T Consensus 117 ~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~----~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t 190 (251)
T cd05041 117 RDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL----KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS 190 (251)
T ss_pred hhcCcceEEEcCCCcEEEeeccccccccCCcceecccc----CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHh
Confidence 99999999999999999999999886542211000000 000111233333344556788999999999999997
No 323
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.83 E-value=2.3e-20 Score=183.57 Aligned_cols=201 Identities=18% Similarity=0.221 Sum_probs=123.7
Q ss_pred HHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHH
Q 012411 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (464)
Q Consensus 124 ~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (464)
++..|... +.||+|++|.||+|....+|+.||+|+.......... ...
T Consensus 13 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~------------------------------~~~ 60 (307)
T cd06607 13 PEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE------------------------------KWQ 60 (307)
T ss_pred cchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHH------------------------------HHH
Confidence 34445544 6799999999999999878999999988532111000 001
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHH
Q 012411 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSL 281 (464)
Q Consensus 204 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l 281 (464)
.+.+|+. .+.. + +++++.-..-+.......++||||++| ++.+.........+... .+..++..++
T Consensus 61 ~~~~Ei~------~l~~----l-~h~niv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L 128 (307)
T cd06607 61 DIIKEVR------FLQQ----L-RHPNTIEYKGCYLREHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGL 128 (307)
T ss_pred HHHHHHH------HHHh----C-CCCCEEEEEEEEEeCCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHH
Confidence 1111111 1111 1 122222111122224567899999986 44444332222333333 3456788899
Q ss_pred HHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHH---HcCCCCCCCCcc
Q 012411 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY---ALDFLSPDVDVT 358 (464)
Q Consensus 282 ~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~D~~ 358 (464)
.|+|+.|++|+|++|+||+++.+|.++|+|||++........ ..+ .+..++++.. ..+..+.++|+|
T Consensus 129 ~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~--~~~--------~~~y~aPE~~~~~~~~~~~~~sDv~ 198 (307)
T cd06607 129 AYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS--FVG--------TPYWMAPEVILAMDEGQYDGKVDVW 198 (307)
T ss_pred HHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCC--ccC--------CccccCceeeeccCCCCCCcccchH
Confidence 999999999999999999999999999999999876543311 111 1222223222 123457789999
Q ss_pred hHHHHHHHHHHHhccCCCCcCc
Q 012411 359 PIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
++|+.+++++++. .++...+
T Consensus 199 s~G~il~el~tg~--~p~~~~~ 218 (307)
T cd06607 199 SLGITCIELAERK--PPLFNMN 218 (307)
T ss_pred HHHHHHHHHHcCC--CCCCCcc
Confidence 9999999999843 4444433
No 324
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.83 E-value=2.8e-20 Score=183.64 Aligned_cols=208 Identities=18% Similarity=0.244 Sum_probs=127.3
Q ss_pred hCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHH
Q 012411 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199 (464)
Q Consensus 120 lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~ 199 (464)
++..++++|..+ +.||.|++|.||+|++..+|+.|++|+.......... ..
T Consensus 15 ~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~-~~-------------------------- 65 (313)
T cd06633 15 YKDDPEEIFVGL--HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNE-KW-------------------------- 65 (313)
T ss_pred ccCCHHHHhhcc--eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchH-HH--------------------------
Confidence 456677887766 5699999999999999888999999998643111000 00
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHH
Q 012411 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGI 277 (464)
Q Consensus 200 ~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i 277 (464)
..+ ..|...+.++ .+..-+.+..++ ......+++|||+.| ++.+.........+... .+..++
T Consensus 66 ---~~~------~~E~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi 130 (313)
T cd06633 66 ---QDI------IKEVKFLQQL----KHPNTIEYKGCY-LKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGA 130 (313)
T ss_pred ---HHH------HHHHHHHHhC----CCCCCccEEEEE-EeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 001 1111111111 111111111122 123456899999976 55554333233334333 345677
Q ss_pred HHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 012411 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (464)
Q Consensus 278 ~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~ 357 (464)
..++.|+|+.|++|+|++|+||+++.++.++|+|||++....... ...++ ..+..||.+.. ...+..+.++|+
T Consensus 131 ~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~--~~~~~---~~y~aPE~~~~--~~~~~~~~~sDv 203 (313)
T cd06633 131 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN--SFVGT---PYWMAPEVILA--MDEGQYDGKVDV 203 (313)
T ss_pred HHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCC--Ccccc---ccccChhhccc--cCCCCCCchhhH
Confidence 889999999999999999999999999999999999987543221 11121 12223333210 012445778999
Q ss_pred chHHHHHHHHHHHhccCCCCcCc
Q 012411 358 TPIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 358 ~sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
|++|+.+++++++. .|+...+
T Consensus 204 ~slGvil~el~~g~--~p~~~~~ 224 (313)
T cd06633 204 WSLGITCIELAERK--PPLFNMN 224 (313)
T ss_pred HHHHHHHHHHHhCC--CCCCCCC
Confidence 99999999998743 4444433
No 325
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.83 E-value=1.5e-19 Score=174.96 Aligned_cols=204 Identities=16% Similarity=0.084 Sum_probs=127.9
Q ss_pred cccccceecEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|+||+||+|.++.+|+ .||+|+......... ..
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~--------------------------------------~~ 54 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKA--------------------------------------NK 54 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHH--------------------------------------HH
Confidence 689999999999999876665 589998764421100 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHC
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEY 287 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~ 287 (464)
.+.+|+..+.++ .+..-+.+..... +...+++|||++|++|.+.........+... .+..++..++.++|+.
T Consensus 55 ~~~~e~~~l~~l----~h~~i~~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 128 (279)
T cd05057 55 EILDEAYVMASV----DHPHVVRLLGICL--SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK 128 (279)
T ss_pred HHHHHHHHHHhC----CCCCcceEEEEEe--cCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 122222222222 1111111111221 2677899999999999887544333334333 3446778899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
|++|+|+||+||+++.++.++|+|||++..+......... ........+++++....+..+.+.|+|++|+.++++
T Consensus 129 ~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el 204 (279)
T cd05057 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHA----EGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWEL 204 (279)
T ss_pred CEEecccCcceEEEcCCCeEEECCCcccccccCcccceec----CCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHH
Confidence 9999999999999999999999999999876533211000 000001122333333445567889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHH
Q 012411 368 FDDALNSSVSELNFKTIVD 386 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~ 386 (464)
++ +...|+...+..++..
T Consensus 205 ~~-~g~~p~~~~~~~~~~~ 222 (279)
T cd05057 205 MT-FGAKPYEGIPAVEIPD 222 (279)
T ss_pred hc-CCCCCCCCCCHHHHHH
Confidence 87 2334555555444443
No 326
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.83 E-value=4.2e-20 Score=184.24 Aligned_cols=202 Identities=17% Similarity=0.216 Sum_probs=126.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||.|++|.||+|++..+|+.||||..++....... .....+.+ ..+....|+|++.+.+.+...
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~E~----~~l~~l~h~ni~~~~~~~~~~--------- 76 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRID-AKRTLREI----KLLRHLDHENVIAIKDIMPPP--------- 76 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccccch-hHHHHHHH----HHHHhcCCCCccchHHheecc---------
Confidence 6899999999999999889999999998754211100 00111111 112223467776666543211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
. .+.....+++|||+.+ +|.+..... .........+..++..++.++|+.|++|+
T Consensus 77 ---------------~--------~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~ 132 (337)
T cd07858 77 ---------------H--------REAFNDVYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHR 132 (337)
T ss_pred ---------------c--------ccccCcEEEEEeCCCC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 0 0011346899999975 665543221 11223334455778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
|+||.||+++.++.++|+|||++......... .........+..||.+.. .+..+.++|+|++|+.+++++.+
T Consensus 133 dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~----~~~~~~~~DiwslG~il~~l~~g-- 205 (337)
T cd07858 133 DLKPSNLLLNANCDLKICDFGLARTTSEKGDF-MTEYVVTRWYRAPELLLN----CSEYTTAIDVWSVGCIFAELLGR-- 205 (337)
T ss_pred CCCHHHEEEcCCCCEEECcCccccccCCCccc-ccccccccCccChHHHhc----CCCCCCcccHHHHHHHHHHHHcC--
Confidence 99999999999999999999998876433110 000011122334444321 12357889999999999999874
Q ss_pred cCCCCcCc
Q 012411 373 NSSVSELN 380 (464)
Q Consensus 373 ~~~~~~~~ 380 (464)
..++...+
T Consensus 206 ~~pf~~~~ 213 (337)
T cd07858 206 KPLFPGKD 213 (337)
T ss_pred CCCCCCCC
Confidence 34444433
No 327
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.83 E-value=3.2e-20 Score=180.91 Aligned_cols=137 Identities=15% Similarity=0.098 Sum_probs=89.7
Q ss_pred CCCceEEEeeecCcccCcHHHHHh-----------------------cCCCHH--HHHHHHHHHHHHHHHHCCcccCCCC
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIES-----------------------QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPH 295 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~-----------------------~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlk 295 (464)
....+++|||+.|++|.++..... ...+.. ..+..++..++.++|+.|++|+|+|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 456789999999999987643211 011222 2344677789999999999999999
Q ss_pred CcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccC
Q 012411 296 PGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNS 374 (464)
Q Consensus 296 p~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~ 374 (464)
|+||++++++.++|+|||++..+....... .........+..|| ...-...+.+.|+|++|+.++++++. ...
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE-----~~~~~~~~~~~Di~slG~~l~el~t~-g~~ 228 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIE-----SLFDHIYTTQSDVWSFGVLLWEIVTL-GGN 228 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHH-----HHccCCcchHhHHHHHHHHHHHHHhc-CCC
Confidence 999999999999999999987653321100 00000011223343 33334457789999999999999971 234
Q ss_pred CCCcCcHHH
Q 012411 375 SVSELNFKT 383 (464)
Q Consensus 375 ~~~~~~~~~ 383 (464)
|+.......
T Consensus 229 p~~~~~~~~ 237 (290)
T cd05045 229 PYPGIAPER 237 (290)
T ss_pred CCCCCCHHH
Confidence 444444333
No 328
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.83 E-value=3.8e-20 Score=176.48 Aligned_cols=245 Identities=13% Similarity=0.133 Sum_probs=149.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|++|.||+|..+.+|..||+|......... .+...++ ..+..+....|+++..+.+.+.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~---~E~~~l~~~~h~~i~~~~~~~~----------- 69 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--KEKEASK---KEVILLAKMKHPNIVTFFASFQ----------- 69 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--hhhHHHH---HHHHHHHhCCCCChhhhhheec-----------
Confidence 68999999999999999889999999985421100 0111111 1111112223555554443221
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc-CCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
.....+++|||++|++|.+....... ..+.. ..+..++..++.++|+.|++
T Consensus 70 --------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (257)
T cd08225 70 --------------------------ENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKIL 123 (257)
T ss_pred --------------------------cCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 12456899999999999886543221 12332 33445677899999999999
Q ss_pred cCCCCCcceEEccCCc-EEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGK-LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~-i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|+|++|.||++++++. ++++|||.+..+....... ....+.+..++++....+..+.+.|+|++|+.++++++
T Consensus 124 H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~ 197 (257)
T cd08225 124 HRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA------YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT 197 (257)
T ss_pred cccCCHHHEEEcCCCCeEEecccccchhccCCcccc------cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHh
Confidence 9999999999998865 6999999988765432110 01112333344444444556788999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHhhhHHHHHHhcCCCCHHHHHH
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAASYPYFAKRLLTDPNPYLRDA 449 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~~~p~~~~~l~~~~~p~~r~~ 449 (464)
+. .|+...+.......+. .... ....| ........++.+++ ..+|..||+
T Consensus 198 g~--~p~~~~~~~~~~~~~~---~~~~---------------------~~~~~--~~~~~~~~~i~~~l--~~~p~~Rpt 247 (257)
T cd08225 198 LK--HPFEGNNLHQLVLKIC---QGYF---------------------APISP--NFSRDLRSLISQLF--KVSPRDRPS 247 (257)
T ss_pred CC--CCCCCccHHHHHHHHh---cccC---------------------CCCCC--CCCHHHHHHHHHHh--ccChhhCcC
Confidence 43 4444444333222211 1100 01112 12234566666555 457899999
Q ss_pred HHHHhcc
Q 012411 450 LVELLFK 456 (464)
Q Consensus 450 ~~~~l~~ 456 (464)
+.+++..
T Consensus 248 ~~~ll~~ 254 (257)
T cd08225 248 ITSILKR 254 (257)
T ss_pred HHHHhhC
Confidence 9988764
No 329
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.83 E-value=2.5e-20 Score=177.15 Aligned_cols=189 Identities=18% Similarity=0.163 Sum_probs=124.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|++|.||+|....+|+.|+||......... ...+.+.+|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-------------------------------~~~~~~~~e----- 49 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE-------------------------------EALKSIMQE----- 49 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH-------------------------------HHHHHHHHH-----
Confidence 78999999999999998789999999987542110 000111122
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
...+.++. ++++.-+.-+.......+++|||++|++|.+..... ...+.. ..+..++..++.++|+.|++|
T Consensus 50 -~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H 122 (254)
T cd06627 50 -IDLLKNLK-----HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIH 122 (254)
T ss_pred -HHHHHhCC-----CCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 22222221 122221111222345678999999999998864432 223333 344567778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|++|+||+++.++.++|+|||.+......... .....+....++++.......+.+.|+|++|+.+++++.+.
T Consensus 123 ~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~ 196 (254)
T cd06627 123 RDIKAANILTTKDGVVKLADFGVATKLNDVSKD------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN 196 (254)
T ss_pred CCCCHHHEEECCCCCEEEeccccceecCCCccc------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCC
Confidence 999999999999999999999999877554321 00111223333344433344577899999999999999843
No 330
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.83 E-value=1.3e-19 Score=176.55 Aligned_cols=197 Identities=20% Similarity=0.250 Sum_probs=121.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.+|+|+..+..... ..+..
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~----------------------------------~~~~~------ 67 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD----------------------------------EEIEA------ 67 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccHH----------------------------------HHHHH------
Confidence 67999999999999998889999999986431100 00111
Q ss_pred HHHHHHHHHHHhCCCCCEE-eceeecc----CCCCceEEEeeecCcccCcHHHHH---hcCCC--HHHHHHHHHHHHHHH
Q 012411 214 EGQNARRFKKLYADKEDVL-VPDIFWD----YTSGKVLTMEWVEGVKLNEQVAIE---SQGLK--VLDLVNTGIQCSLRQ 283 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~-vP~v~~~----~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~--~~~~~~~~i~~~l~~ 283 (464)
|...+.++ .+++++. +..++.. ..+..++||||++|++|.+..... ..... ....+..++..++.+
T Consensus 68 e~~~l~~l----~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 143 (291)
T cd06639 68 EYNILQSL----PNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQH 143 (291)
T ss_pred HHHHHHHh----cCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 11111111 1122221 1112211 123578999999999998764321 11222 333455677789999
Q ss_pred HHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHH--HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 012411 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~ 361 (464)
+|+.|++|+|+||+||+++.++.++|+|||++..+...... ...+ ...+..||.+......-...+.++|+|++|
T Consensus 144 lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~---~~~y~aPE~~~~~~~~~~~~~~~~Di~slG 220 (291)
T cd06639 144 LHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVG---TPFWMAPEVIACEQQYDYSYDARCDVWSLG 220 (291)
T ss_pred HHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccC---CccccChhhhcCCCCcccccCCccchHHHH
Confidence 99999999999999999999999999999998875432111 1111 122333443321100000136789999999
Q ss_pred HHHHHHHHHhccCCCCcC
Q 012411 362 PALRNFFDDALNSSVSEL 379 (464)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~ 379 (464)
+.+++++++ ..|+...
T Consensus 221 vi~~el~~g--~~p~~~~ 236 (291)
T cd06639 221 ITAIELGDG--DPPLFDM 236 (291)
T ss_pred HHHHHHhhC--CCCCCCC
Confidence 999999984 3444443
No 331
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.83 E-value=1.5e-19 Score=180.66 Aligned_cols=200 Identities=19% Similarity=0.262 Sum_probs=123.5
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHH-HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
.++||+|++|.||+|++..+|+.||||++...... .... ..++.+ ..+....|+|++.+.+.+...
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~--~~~~e~----~~l~~l~h~niv~~~~~~~~~------- 86 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAK--RAYREL----TLLKHMQHENVIGLLDVFTSA------- 86 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchh--HHHHHH----HHHHhcCCCCccchhheeccc-------
Confidence 48999999999999999878999999998643211 1000 011111 111223366665555432210
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
. ........++||||+.+ ++.+... ..........+..++..++.++|+.|++|
T Consensus 87 -----------------~-------~~~~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 140 (342)
T cd07879 87 -----------------V-------SGDEFQDFYLVMPYMQT-DLQKIMG-HPLSEDKVQYLVYQMLCGLKYIHSAGIIH 140 (342)
T ss_pred -----------------c-------cCCCCceEEEEeccccc-CHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 0 00111345799999964 4433211 11222333445567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.+|.++|+|||++........ ...+ ...+..||.+.. ....+.++|+|++|+.+++++.+
T Consensus 141 ~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~-~~~~---~~~y~aPE~~~~----~~~~~~~~Dv~slGvil~el~~g- 211 (342)
T cd07879 141 RDLKPGNLAVNEDCELKILDFGLARHADAEMT-GYVV---TRWYRAPEVILN----WMHYNQTVDIWSVGCIMAEMLTG- 211 (342)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC-Ccee---eecccChhhhcC----ccccCchHHHHHHHHHHHHHHhC-
Confidence 99999999999999999999999887543211 1111 112233443311 12346789999999999999984
Q ss_pred ccCCCCcCcH
Q 012411 372 LNSSVSELNF 381 (464)
Q Consensus 372 ~~~~~~~~~~ 381 (464)
..++...+.
T Consensus 212 -~~pf~~~~~ 220 (342)
T cd07879 212 -KTLFKGKDY 220 (342)
T ss_pred -CCCCCCCCH
Confidence 345554443
No 332
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=7.2e-20 Score=172.94 Aligned_cols=187 Identities=22% Similarity=0.217 Sum_probs=126.6
Q ss_pred cccccceecEEEEEE-EccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhch--hcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQ-LKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYV--DIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~-~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
++||+|++|+||+|. +..+|+.||||+.+++.......+. ...... .....++..... ..
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~---------~~ 96 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--------YVDGDFRFKYRKINPRKLVR---------LW 96 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--------hcccchhhccCCCCHHHHHH---------HH
Confidence 689999999999999 5458999999999876322100000 000000 000112222111 12
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~g 288 (464)
+..|+.++.++.+. .+.+|+++.. +..++||||++|.++..... ....... ...+..++..++.++|..|
T Consensus 97 ~~~E~~~L~~L~~~-----~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~g 168 (237)
T smart00090 97 AEKEFRNLQRLYEA-----GVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDILEEMRKLYKEG 168 (237)
T ss_pred HHHHHHHHHHHHhc-----CCCCCeeeEe--cCceEEEEEecCCccccccc-ccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 45678888888642 4667877753 45699999999988866421 1122222 2345577888999999999
Q ss_pred -cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCC
Q 012411 289 -YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSP 353 (464)
Q Consensus 289 -i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (464)
++|+|+||+||+++ +++++|+|||.+........ .+++.+|.+.+...+.+.|+.+.
T Consensus 169 ~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~~~ 226 (237)
T smart00090 169 ELVHGDLSEYNILVH-DGKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVDEL 226 (237)
T ss_pred CEEeCCCChhhEEEE-CCCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999998 88999999999987766543 24577888888888877776543
No 333
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.82 E-value=8.6e-20 Score=182.45 Aligned_cols=209 Identities=13% Similarity=0.095 Sum_probs=126.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||.|++|.||+|....+|+.||+|++........ +.+...++.+....|+++..+.+.+...-..
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~-------~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~------ 77 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSV-------KHALREIKIIRRLDHDNIVKVYEVLGPSGSD------ 77 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchH-------HHHHHHHHHHHhcCCCcchhhHhhhcccccc------
Confidence 789999999999999988999999998854322111 1111111222233577777776654321000
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
.......+.+ -...+++|||+++ +|.+..............+..++..++.+||+.|++|+|
T Consensus 78 ----------------~~~~~~~~~~-~~~~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~d 139 (342)
T cd07854 78 ----------------LTEDVGSLTE-LNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRD 139 (342)
T ss_pred ----------------cccccccccc-cceEEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 0000000000 1245799999975 665543322233344455667888899999999999999
Q ss_pred CCCcceEEcc-CCcEEEEecCCCCcCCHHHHHH-HH-HHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 294 PHPGNLLATP-EGKLAFLDFGMMSETPEEARFA-II-GHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 294 lkp~Nili~~-~g~i~l~DFGl~~~l~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
+||+||+++. ++.++++|||++..+....... .. .......+..||.+. .....+.++|+||+|+.+++++++
T Consensus 140 ikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~DiwSlGvil~el~~g 215 (342)
T cd07854 140 LKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLL----SPNNYTKAIDMWAAGCIFAEMLTG 215 (342)
T ss_pred CCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHh----CccccCchhhHHHHHHHHHHHHhC
Confidence 9999999984 5678999999987654321100 00 001112233344321 112346789999999999999984
Q ss_pred hccCCCCcC
Q 012411 371 ALNSSVSEL 379 (464)
Q Consensus 371 ~~~~~~~~~ 379 (464)
..++...
T Consensus 216 --~~pf~~~ 222 (342)
T cd07854 216 --KPLFAGA 222 (342)
T ss_pred --CCCCCCC
Confidence 3454433
No 334
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.82 E-value=7.3e-21 Score=185.57 Aligned_cols=202 Identities=16% Similarity=0.176 Sum_probs=123.8
Q ss_pred cccccceecEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||.|++|.||+|... .++..|++|..........
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--------------------------------------- 51 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR--------------------------------------- 51 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHH---------------------------------------
Confidence 67999999999999853 2456799998764322110
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-----------------cCCCHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-----------------QGLKVLD 271 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-----------------~~~~~~~ 271 (464)
-.+.+|...+.++ +++++.-..-+.......++||||++|++|.++..... .+.....
T Consensus 52 ~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (291)
T cd05094 52 KDFQREAELLTNL-----QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML 126 (291)
T ss_pred HHHHHHHHHHhcC-----CCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHH
Confidence 0111222222221 11222211222233456799999999999988754321 1112233
Q ss_pred HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 272 ~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
.+..++..++.++|+.|++|+|+||.||+++.++.++|+|||++............+. ..+....++++.......
T Consensus 127 ~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~ 202 (291)
T cd05094 127 HIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH----TMLPIRWMPPESIMYRKF 202 (291)
T ss_pred HHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCC----CCcceeecChHHhccCCC
Confidence 4556788899999999999999999999999999999999999876533211100000 001122233333334455
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHH
Q 012411 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTI 384 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~ 384 (464)
+.++|+||+|+.++++++. ...|+...+..+.
T Consensus 203 ~~~~Di~slG~il~el~t~-g~~p~~~~~~~~~ 234 (291)
T cd05094 203 TTESDVWSFGVILWEIFTY-GKQPWFQLSNTEV 234 (291)
T ss_pred CchhhHHHHHHHHHHHHhC-CCCCCCCCCHHHH
Confidence 7789999999999999871 2235444444333
No 335
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.82 E-value=4.2e-21 Score=184.22 Aligned_cols=207 Identities=21% Similarity=0.272 Sum_probs=127.4
Q ss_pred cccccceecEEEEEEEc----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLK----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~----~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||.|+||.||+|.++ ..+..|+||+..+...... ..
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~--------------------------------------~~ 46 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE--------------------------------------EE 46 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH--------------------------------------HH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc--------------------------------------ce
Confidence 56999999999999997 3467899999965422210 00
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHH--HHHHHHHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDL--VNTGIQCSLRQLLE 286 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~--~~~~i~~~l~~lh~ 286 (464)
+|..|.+.+.++ +++++.-..-+.......++||||+++++|.++.... ....+.... +..++..|+.|||+
T Consensus 47 ~~~~e~~~l~~l-----~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~ 121 (259)
T PF07714_consen 47 EFLNEIQILRKL-----RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS 121 (259)
T ss_dssp HHHHHHHHHHTH-----SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 112222222222 1222222222222345678999999999999876544 234454443 35677789999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
.+++|+|++|.||+++.++.+||+|||++........... ..........++++....+..+.++|+|+||..+++
T Consensus 122 ~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~e 197 (259)
T PF07714_consen 122 NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN----DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYE 197 (259)
T ss_dssp TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE----STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999887621100000 000001112223333334445788999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHH
Q 012411 367 FFDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l 388 (464)
+++. ...++.+.+..++...+
T Consensus 198 i~~~-~~~p~~~~~~~~~~~~~ 218 (259)
T PF07714_consen 198 ILTL-GKFPFSDYDNEEIIEKL 218 (259)
T ss_dssp HHTT-SSGTTTTSCHHHHHHHH
T ss_pred cccc-ccccccccccccccccc
Confidence 9983 22456666655555444
No 336
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.82 E-value=1.3e-19 Score=174.60 Aligned_cols=199 Identities=16% Similarity=0.159 Sum_probs=118.7
Q ss_pred ccccceecEEEEEEEc--cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 135 PIAAASLGQVYKAQLK--YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~--~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.||+|+||.||+|... .++..+|+|..+...... .+.++.
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~~ 43 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ--------------------------------------EQMKFL 43 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH--------------------------------------HHHHHH
Confidence 5899999999999865 244679999876442111 011122
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeec--cCCCCceEEEeeecCcccCcHHHHHhc----CCCH--HHHHHHHHHHHHHHH
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFW--DYTSGKVLTMEWVEGVKLNEQVAIESQ----GLKV--LDLVNTGIQCSLRQL 284 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~~LvmE~~~G~~L~~~~~~~~~----~~~~--~~~~~~~i~~~l~~l 284 (464)
.|...+.++ +++++ ++++. ......++||||++|++|.+....... ..+. ...+..++..++.|+
T Consensus 44 ~E~~~l~~l-----~h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 116 (269)
T cd05087 44 EEAQPYRSL-----QHSNL--LQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL 116 (269)
T ss_pred HHHHHHHhC-----CCCCE--eeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH
Confidence 232222222 12222 22222 223567899999999999887543221 1222 223456778899999
Q ss_pred HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcchHH
Q 012411 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPIV 361 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~D~~sl~ 361 (464)
|+.|++|+|+||.||+++.+++++|+|||++........... ........+..||.+...... ....+.++|+||+|
T Consensus 117 H~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05087 117 HKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLG 196 (269)
T ss_pred HHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHH
Confidence 999999999999999999999999999999875432211000 000001112234433211000 01236789999999
Q ss_pred HHHHHHHHHhccCCCCcC
Q 012411 362 PALRNFFDDALNSSVSEL 379 (464)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~ 379 (464)
+.++++++ ....|+...
T Consensus 197 ~~l~el~~-~g~~p~~~~ 213 (269)
T cd05087 197 VTIWELFE-LGSQPYRHL 213 (269)
T ss_pred HHHHHHHh-CCCCCCCCC
Confidence 99999985 123355443
No 337
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.82 E-value=1e-20 Score=183.46 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=91.1
Q ss_pred CCCceEEEeeecCcccCcHHHHHhc--------------CCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccC
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQ--------------GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE 304 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~--------------~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~ 304 (464)
....+++|||++|++|.++...... ..+. ...+..++..++.|+|+.|++|+|+||+||+++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 3557899999999999877442211 1222 23344677789999999999999999999999999
Q ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHH
Q 012411 305 GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKT 383 (464)
Q Consensus 305 g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (464)
+.++|+|||++..+.........+. ....+..++++....+..+.++|+||+|+.++++++. ...|+...+..+
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~~ 232 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGR----TMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTY-GKQPWYQLSNTE 232 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCC----ccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcC-CCCCCccCCHHH
Confidence 9999999999876532211100100 0001223333333344457889999999999999871 234444444333
No 338
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.82 E-value=4.3e-20 Score=180.76 Aligned_cols=208 Identities=20% Similarity=0.229 Sum_probs=124.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|.++.+|+.||||+.+......- ......+. +..+....|+|++.+.+.+...
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-~~~~~~~e----~~~~~~l~h~~i~~~~~~~~~~--------- 78 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-FPITAIRE----IKILRQLNHRNIVNLKEIVTDK--------- 78 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-chHHHHHH----HHHHHhCCCCCeeeeeheecCc---------
Confidence 689999999999999988899999999875421100 00000011 1111122355555544322110
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
. -+..+.+..+..+++|||++| ++.+.........+ ....+..++..++.+||+.|++|
T Consensus 79 ---------------~---~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H 139 (302)
T cd07864 79 ---------------Q---DALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLH 139 (302)
T ss_pred ---------------c---hhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 0 000011112356899999987 44433222212233 33345567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.++.++|+|||.+..+................+..||.+. .....+.+.|+|++|+.+++++++.
T Consensus 140 ~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~----~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 140 RDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLL----GEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred CCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhc----CCCCCCchhHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998876433211111111112233444331 1123467899999999999999853
Q ss_pred ccCCCCcCc
Q 012411 372 LNSSVSELN 380 (464)
Q Consensus 372 ~~~~~~~~~ 380 (464)
.++...+
T Consensus 216 --~~~~~~~ 222 (302)
T cd07864 216 --PIFQANQ 222 (302)
T ss_pred --CCCCCCC
Confidence 4444333
No 339
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.82 E-value=5e-20 Score=179.25 Aligned_cols=124 Identities=19% Similarity=0.167 Sum_probs=85.1
Q ss_pred CCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
...++||||++|++|.+..... ...... ..+..++..++.++|+.|++|+|+||.||+++.++.++|+|||++..+.
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 78 TKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred CEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 4567999999999997764322 223332 3334577889999999999999999999999999999999999987754
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcchHHHHHHHHHHHh
Q 012411 320 EEARFAIIGHVVHMVNRDYEAMARDYYALD--FLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
......-. ...+....++++....+ ..+.+.|+|++|+.+++++++.
T Consensus 157 ~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~ 205 (288)
T cd05583 157 AEEEERAY-----SFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA 205 (288)
T ss_pred cccccccc-----cccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCC
Confidence 33211000 01112222233332222 2467899999999999999843
No 340
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.82 E-value=1.7e-19 Score=175.77 Aligned_cols=202 Identities=16% Similarity=0.132 Sum_probs=123.7
Q ss_pred cccccceecEEEEEEEccC-----CcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYS-----GQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~-----g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|..... ...||+|.......... . ..
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~---~-----------------------------~~---- 61 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKD---L-----------------------------SD---- 61 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHH---H-----------------------------HH----
Confidence 7899999999999998633 36899999875422110 0 00
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---------------cCCCHH--H
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGLKVL--D 271 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~~--~ 271 (464)
+..|...+.++ .+++++.-..-+.......+++|||++|++|.++..... ...+.. .
T Consensus 62 --~~~E~~~l~~l----~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 135 (293)
T cd05053 62 --LVSEMEMMKMI----GKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLV 135 (293)
T ss_pred --HHHHHHHHHhh----cCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHH
Confidence 11122211111 122222211112233456799999999999988753211 112222 2
Q ss_pred HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCC
Q 012411 272 LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFL 351 (464)
Q Consensus 272 ~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 351 (464)
.+..++..++.|+|+.|++|+|+||.||+++.++.++|+|||++..+........... ....+..++++.+..+..
T Consensus 136 ~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~ 211 (293)
T cd05053 136 SFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTN----GRLPVKWMAPEALFDRVY 211 (293)
T ss_pred HHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCC----CCCCccccCHHHhccCCc
Confidence 3456777899999999999999999999999999999999999987643211000000 000111233333344456
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHH
Q 012411 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFK 382 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~ 382 (464)
+.++|+|++|+.++++++. ...++...+..
T Consensus 212 ~~~~Di~slG~il~el~~~-g~~p~~~~~~~ 241 (293)
T cd05053 212 THQSDVWSFGVLLWEIFTL-GGSPYPGIPVE 241 (293)
T ss_pred CcccceeehhhHHHHHhcC-CCCCCCCCCHH
Confidence 7889999999999998862 23444444433
No 341
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.82 E-value=3.7e-20 Score=180.61 Aligned_cols=190 Identities=19% Similarity=0.247 Sum_probs=114.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||||+.+...... + ....+.+|
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~------------------------~-------~~~~~~~E----- 50 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE------------------------G-------IPPTALRE----- 50 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc------------------------C-------CchHHHHH-----
Confidence 67999999999999998889999999876431110 0 00001111
Q ss_pred HHHHHHHHHHHhCCCCCE-EeceeeccCC----CCceEEEeeecCcccCcHHHHHh----cCCC--HHHHHHHHHHHHHH
Q 012411 214 EGQNARRFKKLYADKEDV-LVPDIFWDYT----SGKVLTMEWVEGVKLNEQVAIES----QGLK--VLDLVNTGIQCSLR 282 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~----~~~~LvmE~~~G~~L~~~~~~~~----~~~~--~~~~~~~~i~~~l~ 282 (464)
...+..+ .+++++ .+..++.... ...+++|||++| ++.+...... ...+ ....+..++..+|.
T Consensus 51 -~~~l~~l----~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~ 124 (295)
T cd07837 51 -ISLLQML----SESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVA 124 (295)
T ss_pred -HHHHHHc----cCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 1111111 111111 1111111111 125899999997 6665533221 1123 33345577888999
Q ss_pred HHHHCCcccCCCCCcceEEcc-CCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 012411 283 QLLEYGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~-~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~ 361 (464)
|+|+.|++|+|+||+||+++. ++.++|+|||++..+...... .........+..||.+. .....+.++|+|++|
T Consensus 125 ~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~----~~~~~~~~~Di~slG 199 (295)
T cd07837 125 HCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS-YTHEIVTLWYRAPEVLL----GSTHYSTPVDIWSVG 199 (295)
T ss_pred HHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccc-cCCcccccCCCChHHhh----CCCCCCchHHHHHHH
Confidence 999999999999999999998 889999999998765332110 00001112233344331 122347789999999
Q ss_pred HHHHHHHHH
Q 012411 362 PALRNFFDD 370 (464)
Q Consensus 362 ~~l~~~~~~ 370 (464)
+.+++++++
T Consensus 200 ~~l~~l~~g 208 (295)
T cd07837 200 CIFAEMSRK 208 (295)
T ss_pred HHHHHHHcC
Confidence 999999984
No 342
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.82 E-value=2.7e-20 Score=179.31 Aligned_cols=141 Identities=15% Similarity=0.117 Sum_probs=88.3
Q ss_pred CCceEEEeeecCcccCcHHHHHhcC---CCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQG---LKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMS 316 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~---~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~ 316 (464)
...++||||++|++|.+........ .+. ...+..++..++.|+|+.|++|+|+||+|||++.++.++|+|||++.
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~ 147 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGP 147 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEeccccccc
Confidence 4568999999999998875432211 121 22345678889999999999999999999999999999999999876
Q ss_pred cCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHH--cCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHH
Q 012411 317 ETPEEARFA-IIGHVVHMVNRDYEAMARDYYA--LDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKT 383 (464)
Q Consensus 317 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (464)
......... ..+......+..||.+...... ....+.++|+||+|+.++++++. ...|+...+..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~-~~~p~~~~~~~~ 216 (268)
T cd05086 148 SRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFEN-AAQPYSHLSDRE 216 (268)
T ss_pred ccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCCHHH
Confidence 432211100 0000111122334433110000 01125679999999999999863 233555444433
No 343
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.82 E-value=2.2e-20 Score=179.66 Aligned_cols=125 Identities=16% Similarity=0.133 Sum_probs=87.1
Q ss_pred CCCceEEEeeecCcccCcHHHHHh------cCCCHHH--HHHHHHHHHHHHHHHCCcccCCCCCcceEEccCC-----cE
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIES------QGLKVLD--LVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG-----KL 307 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~------~~~~~~~--~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g-----~i 307 (464)
....+++|||++|++|.+...... ...+... .+..++..++.|+|+.|++|+|+||+||+++.++ .+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence 355789999999999988754321 1123232 3446677899999999999999999999999877 89
Q ss_pred EEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 308 AFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 308 ~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+++|||++..+.........+ ........++++.+.-+..+.+.|+|++|+.++++++
T Consensus 151 ~l~dfg~~~~~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt 208 (269)
T cd05044 151 KIGDFGLARDIYKSDYYRKEG----EGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208 (269)
T ss_pred EECCcccccccccccccccCc----ccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHH
Confidence 999999988654321100000 0001122334444455667889999999999999986
No 344
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.82 E-value=8.8e-20 Score=173.35 Aligned_cols=191 Identities=17% Similarity=0.102 Sum_probs=124.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.|++|+........ . ..+.+.+|++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~-----------------------------~~~~~~~e~~--- 51 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE--E-----------------------------ELEALEREIR--- 51 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccch--H-----------------------------HHHHHHHHHH---
Confidence 78999999999999998889999999986542110 0 0011111211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCC--CCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
.+.++ . ++++.-..-..... ...+++|||++|++|.+...... ..+.. ..+..++..++.++|+.|+
T Consensus 52 ---~l~~l----~-~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 52 ---ILSSL----Q-HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred ---HHHHc----C-CCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 11111 1 22222211122222 56789999999999988754332 33332 3345667779999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|++|.||++++++.++|+|||.+.......... ......+....++++....+..+.++|+|++|+.+++++.
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~ 198 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE----GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT 198 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEecccccccc----cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999999999988765542100 0001112233334444444446788999999999999998
Q ss_pred Hh
Q 012411 370 DA 371 (464)
Q Consensus 370 ~~ 371 (464)
+.
T Consensus 199 g~ 200 (260)
T cd06606 199 GK 200 (260)
T ss_pred CC
Confidence 43
No 345
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.82 E-value=4.1e-20 Score=181.94 Aligned_cols=201 Identities=18% Similarity=0.199 Sum_probs=124.2
Q ss_pred hCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHH
Q 012411 120 LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALID 199 (464)
Q Consensus 120 lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~ 199 (464)
+....+..|... +.||.|++|+||+|++..+|+.||||.........-.
T Consensus 9 ~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~----------------------------- 57 (308)
T cd06634 9 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE----------------------------- 57 (308)
T ss_pred hcCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChH-----------------------------
Confidence 344455666654 6799999999999999888999999987632111000
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHH
Q 012411 200 EFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGI 277 (464)
Q Consensus 200 ~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i 277 (464)
.... +..|...+..+ .+..-+.+.. +.......++||||+.| ++.+.........+... .+..++
T Consensus 58 -~~~~------~~~e~~~l~~l----~h~~i~~~~~-~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l 124 (308)
T cd06634 58 -KWQD------IIKEVRFLQKL----RHPNTIQYRG-CYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGA 124 (308)
T ss_pred -HHHH------HHHHHHHHHhC----CCCCcccEEE-EEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 0000 11122111111 1111111111 11224567899999976 66655433333344333 334567
Q ss_pred HHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCc
Q 012411 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDV 357 (464)
Q Consensus 278 ~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~ 357 (464)
..++.++|+.|++|+|++|+||+++.++.++|+|||++..+..... ..++ ..+..||.+.. ...+..+.++|+
T Consensus 125 ~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~---~~y~aPE~~~~--~~~~~~~~~~Di 197 (308)
T cd06634 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX--FVGT---PYWMAPEVILA--MDEGQYDGKVDV 197 (308)
T ss_pred HHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCccc--ccCC---ccccCHHHHhh--cccCCCCcccch
Confidence 7899999999999999999999999999999999999876644321 1111 12233443321 012345778999
Q ss_pred chHHHHHHHHHHHh
Q 012411 358 TPIVPALRNFFDDA 371 (464)
Q Consensus 358 ~sl~~~l~~~~~~~ 371 (464)
|++|+.+++++++.
T Consensus 198 ~slG~il~el~~g~ 211 (308)
T cd06634 198 WSLGITCIELAERK 211 (308)
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999998743
No 346
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.82 E-value=2.3e-20 Score=181.61 Aligned_cols=188 Identities=18% Similarity=0.174 Sum_probs=116.7
Q ss_pred cccccceecEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
..||.|+||.||+|.+.. ++..||+|+.+......... .
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~--------------------------------~---- 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA--------------------------------D---- 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHH--------------------------------H----
Confidence 679999999999999742 57899999987542211100 0
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc---------------------CC
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------------GL 267 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------------~~ 267 (464)
+..|...+.++ +++++.-..-+.......+++|||++|++|.+....... ..
T Consensus 55 --~~~ei~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (288)
T cd05050 55 --FQREAALMAEF-----DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPL 127 (288)
T ss_pred --HHHHHHHHHhc-----CCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcccccccccccccccccccccccc
Confidence 11111111111 112111111111223457899999999999887542211 11
Q ss_pred CHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHH
Q 012411 268 KVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARD 344 (464)
Q Consensus 268 ~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 344 (464)
+.. ..+..++..++.++|..|++|+|+||+||+++.++.++|+|||++..+..... ........ ....++++
T Consensus 128 ~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~-----~~~y~aPE 202 (288)
T cd05050 128 SCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAI-----PIRWMPPE 202 (288)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCcc-----ChhhcCHH
Confidence 222 23456677799999999999999999999999999999999999876432210 00000000 11233344
Q ss_pred HHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 345 YYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 345 ~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
....+..+.++|+||+|+.++++++
T Consensus 203 ~~~~~~~~~~~Dv~slG~il~el~~ 227 (288)
T cd05050 203 SIFYNRYTTESDVWAYGVVLWEIFS 227 (288)
T ss_pred HHhcCCCCchhHHHHHHHHHHHHHh
Confidence 4444556788999999999999886
No 347
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.82 E-value=6.5e-21 Score=164.76 Aligned_cols=186 Identities=20% Similarity=0.262 Sum_probs=121.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|.+|+|++|+.+.+++.||+|..+-+-.+. ..-.+..+|+-+++
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddde-------------------------------gvpssalreicllk 56 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE-------------------------------GVPSSALREICLLK 56 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCC-------------------------------CCcHHHHHHHHHHH
Confidence 67999999999999999999999999987432111 00011122222233
Q ss_pred H--HHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 012411 214 E--GQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 E--a~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (464)
| ++|+.++.+.+... ...-||.|||+. .|..+-..-....++ .+....|+..++.++|++++
T Consensus 57 elkhknivrl~dvlhsd-------------kkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnv 122 (292)
T KOG0662|consen 57 ELKHKNIVRLHDVLHSD-------------KKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNV 122 (292)
T ss_pred HhhhcceeehhhhhccC-------------ceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhh
Confidence 3 22444444333222 344599999975 444432111122333 34455677789999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
.|||+||.|++|+.+|.+|+.|||+++.+.-..+ .+..-+.++.++.|+.+- ....++..+|+||.||.+.|+.+
T Consensus 123 lhrdlkpqnllin~ngelkladfglarafgipvr-cysaevvtlwyrppdvlf----gakly~tsidmwsagcifaelan 197 (292)
T KOG0662|consen 123 LHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLF----GAKLYSTSIDMWSAGCIFAELAN 197 (292)
T ss_pred hhccCCcceEEeccCCcEEecccchhhhcCCceE-eeeceeeeeeccCcceee----eeehhccchHhhhcchHHHHHhh
Confidence 9999999999999999999999999987543322 111223345556555432 12234788999999999999887
No 348
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.82 E-value=2.1e-20 Score=183.88 Aligned_cols=207 Identities=21% Similarity=0.206 Sum_probs=125.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+..+|+.||+|+.+...... ... ..+..
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~------------------------------------~~~~~ 55 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIP------------------------------------ISSLR 55 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCc------------------------------------chhhH
Confidence 67999999999999998899999999986431110 000 00111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccC-CCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++ .+..-+.+..++.+. .+..++||||+++ +|.+.......... ....+..++..++.++|+.|++
T Consensus 56 E~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 130 (309)
T cd07845 56 EITLLLNL----RHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFII 130 (309)
T ss_pred HHHHHHhC----CCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 11111111 111112222222221 2346899999986 56554332222223 3334567788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||+||+++.++.++|+|||++..+...... .........+..||.+. .....+.++|+|++|+.+++++.+
T Consensus 131 H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~----~~~~~~~~~DvwslG~il~el~~g 205 (309)
T cd07845 131 HRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP-MTPKVVTLWYRAPELLL----GCTTYTTAIDMWAVGCILAELLAH 205 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccceeeecCCccCC-CCcccccccccChhhhc----CCCCcCchHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998876432110 00001111223344321 112346789999999999999984
Q ss_pred hccCCCCcCcHHHHHHHHH
Q 012411 371 ALNSSVSELNFKTIVDGLG 389 (464)
Q Consensus 371 ~~~~~~~~~~~~~~~~~l~ 389 (464)
..++...+..+....+.
T Consensus 206 --~~~f~~~~~~~~~~~~~ 222 (309)
T cd07845 206 --KPLLPGKSEIEQLDLII 222 (309)
T ss_pred --CCCCCCCCHHHHHHHHH
Confidence 34555444444343333
No 349
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.82 E-value=4.1e-20 Score=178.85 Aligned_cols=119 Identities=18% Similarity=0.126 Sum_probs=82.0
Q ss_pred CCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCC-------cEEEEe
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEG-------KLAFLD 311 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g-------~i~l~D 311 (464)
.+..++||||++|++|...........+. ...+..++..++.|+|+.|++|+|+||.||++++++ .+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 45678999999999998765432223333 334456788899999999999999999999997644 389999
Q ss_pred cCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHHHHHHH
Q 012411 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 312 FGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~D~~sl~~~l~~~~~ 369 (464)
||++........ .. +...+++++.... ...+.++|+|++|+.+++++.
T Consensus 168 ~g~~~~~~~~~~--~~--------~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~ 216 (274)
T cd05076 168 PGVSFTALSREE--RV--------ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF 216 (274)
T ss_pred Cccccccccccc--cc--------cCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 998765422111 01 1112233332222 345778999999999999853
No 350
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.82 E-value=1.3e-20 Score=187.52 Aligned_cols=210 Identities=17% Similarity=0.147 Sum_probs=122.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||||+.+.......... ..+.+.+ ...+.++..
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~---------------------~~~~~~~----~~~~~~~~~ 69 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK---------------------DRQLVGM----CGIHFTTLR 69 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc---------------------chhhhcc----cccchhHHH
Confidence 579999999999999988899999999864321110000 0000000 000011222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
|...+.++. ++++.-..-+.......+++|||++| +|.+..... .........+..++..++.++|+.|++|+
T Consensus 70 E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~ 143 (335)
T PTZ00024 70 ELKIMNEIK-----HENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHR 143 (335)
T ss_pred HHHHHHhCC-----CcceeeeeEEEecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 222222221 12221111122223566899999986 666553221 12233344556778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcCCHHH-------------HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSETPEEA-------------RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~s 359 (464)
|++|+||+++.++.++|+|||++....... +...........+..||.+. .....+.+.|+|+
T Consensus 144 dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~~Dv~s 219 (335)
T PTZ00024 144 DLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLM----GAEKYHFAVDMWS 219 (335)
T ss_pred cccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcc----cCCCCCcHHHHHH
Confidence 999999999999999999999987654110 00000000111222333321 1123466789999
Q ss_pred HHHHHHHHHHHhccCCCCcCc
Q 012411 360 IVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~ 380 (464)
+|+.+++++++ ..++...+
T Consensus 220 lG~~l~el~tg--~~p~~~~~ 238 (335)
T PTZ00024 220 VGCIFAELLTG--KPLFPGEN 238 (335)
T ss_pred HHHHHHHHHhC--CCCCCCCC
Confidence 99999999983 34544443
No 351
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.82 E-value=1.7e-19 Score=177.33 Aligned_cols=203 Identities=16% Similarity=0.126 Sum_probs=123.1
Q ss_pred CcccccceecEEEEEEEcc-------CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKY-------SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~-------~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (464)
.+.||+|+||.||+|.... ++..||+|+.++..... +. ..
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~-----------------------------~~- 69 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---DL-----------------------------SD- 69 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---HH-----------------------------HH-
Confidence 3789999999999998642 23579999987642111 00 00
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc---------------CCCHH
Q 012411 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------------GLKVL 270 (464)
Q Consensus 206 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------------~~~~~ 270 (464)
+..|...+.++ ..++++.-..-+.......++||||++|++|.++...... ..+..
T Consensus 70 -----~~~e~~~l~~l----~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (307)
T cd05098 70 -----LISEMEMMKMI----GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFK 140 (307)
T ss_pred -----HHHHHHHHHHh----cCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHH
Confidence 11111111111 1222222111122234567899999999999887543211 12222
Q ss_pred --HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHH
Q 012411 271 --DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYA 347 (464)
Q Consensus 271 --~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 347 (464)
..+..++..+++++|+.|++|+|+||+||++++++.++|+|||.+..+....... .........+..|| ...
T Consensus 141 ~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~ 215 (307)
T cd05098 141 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPE-----ALF 215 (307)
T ss_pred HHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChH-----Hhc
Confidence 2345677789999999999999999999999999999999999987664321100 00000011223343 333
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHH
Q 012411 348 LDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKT 383 (464)
Q Consensus 348 ~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~ 383 (464)
.+..+.+.|+|++|+.++++++. ...++...+..+
T Consensus 216 ~~~~~~~~DvwslG~~l~el~~~-g~~p~~~~~~~~ 250 (307)
T cd05098 216 DRIYTHQSDVWSFGVLLWEIFTL-GGSPYPGVPVEE 250 (307)
T ss_pred cCCCCcHHHHHHHHHHHHHHHcC-CCCCCCcCCHHH
Confidence 44557889999999999999862 223444444333
No 352
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.82 E-value=2.6e-21 Score=180.20 Aligned_cols=195 Identities=19% Similarity=0.250 Sum_probs=137.9
Q ss_pred HHhhhcccCCcccccceecEEEEEEEccCC----cEEEEEEecC-----ChHHHHHHHHHHHHHHHHHHHhchhcccCCH
Q 012411 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSG----QIVAVKVQRP-----GIEEAIGLDFYLIRGVGFLINKYVDIITTDV 194 (464)
Q Consensus 124 ~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g----~~VAVKv~~p-----~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i 194 (464)
++.+|.+-.-..||+|.+|.||+|..+.++ ..+|||.+.. ++.....+++.++|++ .|+|+
T Consensus 20 ve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl----------~h~nv 89 (438)
T KOG0666|consen 20 VEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL----------KHPNV 89 (438)
T ss_pred HHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh----------cCCcc
Confidence 344444433467999999999999765333 2689998753 3444555555555554 37887
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc------CCC
Q 012411 195 VALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ------GLK 268 (464)
Q Consensus 195 ~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~------~~~ 268 (464)
+.++..|-+ .....+|+.||.+. +|.+++...+. +..
T Consensus 90 i~Lv~Vfl~------------------------------------~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~ 132 (438)
T KOG0666|consen 90 ISLVKVFLS------------------------------------HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRS 132 (438)
T ss_pred hhHHHHHhc------------------------------------cCceEEEEehhhhh-hHHHHHHHhccchhccCCHH
Confidence 777775532 12456799999987 66665543322 223
Q ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccC----CcEEEEecCCCCcCCHHHHH--HHHHHHHHHHhcCHHHHH
Q 012411 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE----GKLAFLDFGMMSETPEEARF--AIIGHVVHMVNRDYEAMA 342 (464)
Q Consensus 269 ~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~----g~i~l~DFGl~~~l~~~~~~--~~~~~~~~~~~~~~~~~~ 342 (464)
..+.+.+|+..++.|||++-++|||+||.|||+..+ |+|||.|||+++.+....+. ..-..+.++.++.||.+.
T Consensus 133 mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLL 212 (438)
T KOG0666|consen 133 MVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLL 212 (438)
T ss_pred HHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhc
Confidence 445667889999999999999999999999999977 89999999999876544221 122334556778888763
Q ss_pred HHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 343 RDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 343 ~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
.. --+++.+|+|++||++.|+++
T Consensus 213 Ga----~hYT~AiDvWAiGCIfaElLt 235 (438)
T KOG0666|consen 213 GA----RHYTKAIDVWAIGCIFAELLT 235 (438)
T ss_pred cc----ccccchhhhHHHHHHHHHHHc
Confidence 21 134889999999999999986
No 353
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.82 E-value=1.4e-20 Score=181.66 Aligned_cols=123 Identities=14% Similarity=0.143 Sum_probs=86.0
Q ss_pred CCceEEEeeecCcccCcHHHHHhc--------CCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEe
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQ--------GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLD 311 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~--------~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~D 311 (464)
...++||||++|++|.+....... .+.. ...+..++..++.|+|+.|++|+|+||+||+++.++.+++.|
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence 467999999999999887543220 2233 334457788899999999999999999999999999999999
Q ss_pred cCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 312 FGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 312 FGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
||++...................+..||.+ ..+..+++.|+|++|+.++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~-----~~~~~~~~~Di~slG~~l~~l~~ 213 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAV-----QEDDFSTKSDVWSFGVLMWEVFT 213 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhh-----ccCCCCchhhHHHHHHHHHHHHh
Confidence 999875432211111111111123334433 23344678999999999999987
No 354
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.82 E-value=2e-21 Score=177.40 Aligned_cols=209 Identities=20% Similarity=0.211 Sum_probs=130.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..||.|+||.|++-.++.+|+..|||.++...... + .+++..|.|-..
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k---e-----------------------------q~rll~e~d~~m 117 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK---E-----------------------------QKRLLMEHDTVM 117 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH---H-----------------------------HHHHHHHHHHHH
Confidence 56999999999999999999999999998653311 0 122333333322
Q ss_pred HHH---HHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHH----HHhcCCCHHHH--HHHHHHHHHHHH
Q 012411 214 EGQ---NARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVA----IESQGLKVLDL--VNTGIQCSLRQL 284 (464)
Q Consensus 214 Ea~---n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~----~~~~~~~~~~~--~~~~i~~~l~~l 284 (464)
... |+.+|....- -.+..|+.||.++- +++.+-. .....++..-+ +......||.||
T Consensus 118 ks~~cp~IVkfyGa~F-------------~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yL 183 (361)
T KOG1006|consen 118 KSSNCPNIVKFYGALF-------------SEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYL 183 (361)
T ss_pred hhcCCcHHHHHhhhhh-------------cCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHH
Confidence 222 3333333210 02567899999964 6554321 11111222111 112223488888
Q ss_pred HH-CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 012411 285 LE-YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (464)
Q Consensus 285 h~-~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~ 362 (464)
-+ ..++|||+||+|||++..|.+||+|||+++++..+...+ -+|.-. +..||.+.+.- -|+ +-.+|+||+|.
T Consensus 184 K~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrp---YmAPERi~p~~--~gy-DiRSDvWSLGI 257 (361)
T KOG1006|consen 184 KEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRP---YMAPERIDPSD--KGY-DIRSDVWSLGI 257 (361)
T ss_pred HHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCcc---ccChhccCCcc--CCc-chhhhhhhhcc
Confidence 75 689999999999999999999999999999986553221 122222 23455554321 133 55789999999
Q ss_pred HHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCC
Q 012411 363 ALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFN 398 (464)
Q Consensus 363 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 398 (464)
+++|+.++- .|... +..+++++..+....+..
T Consensus 258 TL~EvAtG~--fPyr~--w~svfeql~~Vv~gdpp~ 289 (361)
T KOG1006|consen 258 TLYEVATGN--FPYRK--WDSVFEQLCQVVIGDPPI 289 (361)
T ss_pred eEeeeecCC--CCcch--HHHHHHHHHHHHcCCCCe
Confidence 999999854 34443 345778887777665544
No 355
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=4.8e-21 Score=179.82 Aligned_cols=234 Identities=17% Similarity=0.166 Sum_probs=152.9
Q ss_pred ccC-CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 130 SIS-PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 130 ~~~-~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
.|+ -..||.||++.|-.++++.+.+.+|+|++++..... +.|+.-++.-..
T Consensus 251 df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-dedidwvqtek~--------------------------- 302 (593)
T KOG0695|consen 251 DFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DEDIDWVQTEKH--------------------------- 302 (593)
T ss_pred cceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-cccchhHHhhHH---------------------------
Confidence 444 478999999999999999999999999987442211 111111111110
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCc-HHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNE-QVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~-~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (464)
..+.-++++.+.--.-.....++.++|.||++||+|-- ....++.+..-++.+...|..+|.++|+.
T Consensus 303 ------------vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r 370 (593)
T KOG0695|consen 303 ------------VFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER 370 (593)
T ss_pred ------------HHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc
Confidence 01111222332222222233467789999999999854 44445556666777878888899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSET--PEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
||+.||+|-.|+|++..|++||.|+|+++.- +.+...++||+ |.++++++..-.-+...+|.|++|..+.
T Consensus 371 giiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgt--------pnyiapeilrgeeygfsvdwwalgvlmf 442 (593)
T KOG0695|consen 371 GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGT--------PNYIAPEILRGEEYGFSVDWWALGVLMF 442 (593)
T ss_pred CeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCC--------CcccchhhhcccccCceehHHHHHHHHH
Confidence 9999999999999999999999999999863 33444556665 5566666665555678899999999999
Q ss_pred HHHHHhccCCCCcCcH--HHHHHHHHHHHhhCCCCCChHH----HHHHHHHH
Q 012411 366 NFFDDALNSSVSELNF--KTIVDGLGAVLYQYPFNVPAYY----ALILRSLT 411 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~p~~~----~~l~r~l~ 411 (464)
+|+.+-.+...-+.+. ...-+-+..++.+..+++|..+ +.++|+++
T Consensus 443 emmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgfl 494 (593)
T KOG0695|consen 443 EMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFL 494 (593)
T ss_pred HHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhh
Confidence 9998533322211111 0011223455555667777654 45555554
No 356
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.82 E-value=2.8e-19 Score=173.17 Aligned_cols=186 Identities=19% Similarity=0.266 Sum_probs=121.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcc-cCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDII-TTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.||+|++|.||+|+...+|+.|+||........ ..+....+.+. .+.... |+++..+.+.+..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~----~l~~~~~h~~i~~~~~~~~~--------- 69 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVK----SLRKLNEHPNIVKLKEVFRE--------- 69 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHH----HHHhccCCCCchhHHHHhhc---------
Confidence 5799999999999999878999999987644221 01111111111 112233 5666665554321
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
....++||||+ ++++.+...... ...+.. ..+..++..++.++|+.|+
T Consensus 70 ----------------------------~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i 120 (283)
T cd07830 70 ----------------------------NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF 120 (283)
T ss_pred ----------------------------CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 24567999999 667766543322 223333 3445677789999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHH-HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
+|+|++|+||++++++.++|+|||.+......... ...++ ..+..||.+. .....+.+.|+|++|+.+++++
T Consensus 121 ~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~---~~~~aPE~~~----~~~~~~~~~Di~s~G~~l~el~ 193 (283)
T cd07830 121 FHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVST---RWYRAPEILL----RSTSYSSPVDIWALGCIMAELY 193 (283)
T ss_pred ccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCc---ccccCceeee----cCcCcCCccchhhHHHHHHHHH
Confidence 99999999999999999999999998876432110 01111 1122233221 1223467899999999999999
Q ss_pred HH
Q 012411 369 DD 370 (464)
Q Consensus 369 ~~ 370 (464)
++
T Consensus 194 ~g 195 (283)
T cd07830 194 TL 195 (283)
T ss_pred hC
Confidence 85
No 357
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.82 E-value=2e-19 Score=172.27 Aligned_cols=194 Identities=15% Similarity=0.145 Sum_probs=124.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+. ++..||+|..+++.... +. +..
T Consensus 12 ~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~----------------------------------~~------~~~ 50 (260)
T cd05073 12 KKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSV----------------------------------EA------FLA 50 (260)
T ss_pred eEecCccceEEEEEEec-CCccEEEEecCCChhHH----------------------------------HH------HHH
Confidence 78999999999999976 77789999887542110 00 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.+ +.+..-+.+...+.+ ...+++|||++|++|.+...... ...+.. ..+..++..++.++|+.|++
T Consensus 51 e~~~l~~----l~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~ 124 (260)
T cd05073 51 EANVMKT----LQHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 124 (260)
T ss_pred HHHHHHh----cCCCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 2221111 112222223233332 56689999999999988754321 122332 23456788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|+|+||.||+++.++.++|+|||.+..+.........+......+..|| ....+..+..+|+|++|+.++++++.
T Consensus 125 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE-----~~~~~~~~~~~Di~slG~~l~~l~t~ 199 (260)
T cd05073 125 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE-----AINFGSFTIKSDVWSFGILLMEIVTY 199 (260)
T ss_pred ccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHh-----HhccCCcCccccchHHHHHHHHHHhc
Confidence 9999999999999999999999998766432211111111112233344 33445567789999999999999972
Q ss_pred hccCCCCcCc
Q 012411 371 ALNSSVSELN 380 (464)
Q Consensus 371 ~~~~~~~~~~ 380 (464)
...|+...+
T Consensus 200 -g~~p~~~~~ 208 (260)
T cd05073 200 -GRIPYPGMS 208 (260)
T ss_pred -CCCCCCCCC
Confidence 233444443
No 358
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.82 E-value=5.8e-20 Score=181.29 Aligned_cols=185 Identities=21% Similarity=0.243 Sum_probs=130.8
Q ss_pred ccccceecEEEEEEEccCCcEEEEEEecCCh--HHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 135 PIAAASLGQVYKAQLKYSGQIVAVKVQRPGI--EEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 135 pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~--~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
-.|+|-|+.|.+|.+..-|+.||||+++.+- ...-..++++|+.+.. .+...
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~----------AD~Ed---------------- 492 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLND----------ADPED---------------- 492 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhc----------cCchh----------------
Confidence 4799999999999998889999999998662 2223344555554431 11000
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC------CCHHHHHHHHHHHHHHHHHH
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG------LKVLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~------~~~~~~~~~~i~~~l~~lh~ 286 (464)
-.++.++...|.+ .++.|||.|-+. ..|.++ +...| +...+.+..|+..+|..|-.
T Consensus 493 --k~Hclrl~r~F~h-------------knHLClVFE~Ls-lNLRev--LKKyG~nvGL~ikaVRsYaqQLflALklLK~ 554 (752)
T KOG0670|consen 493 --KFHCLRLFRHFKH-------------KNHLCLVFEPLS-LNLREV--LKKYGRNVGLHIKAVRSYAQQLFLALKLLKK 554 (752)
T ss_pred --hhHHHHHHHHhhh-------------cceeEEEehhhh-chHHHH--HHHhCcccceeehHHHHHHHHHHHHHHHHHh
Confidence 1133344444432 256679988763 245554 33332 45567788999999999999
Q ss_pred CCcccCCCCCcceEEccCC-cEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g-~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
+||+|+||||.|||+++.. .+||||||.+....+.. ++-.+.+.+++.||.+...-| +..+|+||+||++|
T Consensus 555 c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~y-----d~~iD~WSvgctLY 626 (752)
T KOG0670|consen 555 CGVLHADIKPDNILVNESKNILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPY-----DYPIDTWSVGCTLY 626 (752)
T ss_pred cCeeecccCccceEeccCcceeeeccCcccccccccc---ccHHHHHHhccCcceeecCcc-----cCCccceeeceeeE
Confidence 9999999999999998654 58999999999887653 344566778888887744333 67899999999999
Q ss_pred HHHHHh
Q 012411 366 NFFDDA 371 (464)
Q Consensus 366 ~~~~~~ 371 (464)
|++++-
T Consensus 627 ElYtGk 632 (752)
T KOG0670|consen 627 ELYTGK 632 (752)
T ss_pred Eeeccc
Confidence 999853
No 359
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.82 E-value=6.3e-20 Score=177.87 Aligned_cols=196 Identities=18% Similarity=0.228 Sum_probs=120.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|+||+|++..+|+.||||+.+....... . .. +..
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------~--------~~------~~~ 47 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT------------------------P--------ST------AIR 47 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccc------------------------h--------HH------HHH
Confidence 689999999999999988899999999874421100 0 00 011
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh--cCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
|...+.++. ++++.-..-+....+..++||||++| +|.+...... ...+.. ..+..++..++.++|+.|+
T Consensus 48 E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (284)
T cd07836 48 EISLMKELK-----HENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV 121 (284)
T ss_pred HHHHHHhhc-----CCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222222221 12221111122233567899999987 6655533221 223333 3445678889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|+||+||++++++.++|+|||++..+....... ........+..||.+. .....+.+.|+|++|+.++++++
T Consensus 122 ~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~y~~PE~~~----~~~~~~~~~Dv~slG~~l~~l~~ 196 (284)
T cd07836 122 LHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF-SNEVVTLWYRAPDVLL----GSRTYSTSIDIWSVGCIMAEMIT 196 (284)
T ss_pred eeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc-ccccccccccChHHhc----CCCCCCcHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999987653321100 0000111223344321 11233667899999999999998
Q ss_pred HhccCCCCcCc
Q 012411 370 DALNSSVSELN 380 (464)
Q Consensus 370 ~~~~~~~~~~~ 380 (464)
+ ..++.+.+
T Consensus 197 g--~~~~~~~~ 205 (284)
T cd07836 197 G--RPLFPGTN 205 (284)
T ss_pred C--CCCCCCCC
Confidence 5 34554444
No 360
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.82 E-value=7.7e-20 Score=178.80 Aligned_cols=188 Identities=20% Similarity=0.211 Sum_probs=117.9
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.||+|++|.||+|.+..+|+.||||.++...... .....++.+..+.. ...|++++.+++.+.
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~e~~~~~~---~~~~~~i~~~~~~~~---------- 84 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE--ENKRILMDLDVVLK---SHDCPYIVKCYGYFI---------- 84 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH--HHHHHHHHHHHHHh---ccCCCchHhhheeee----------
Confidence 378999999999999998779999999986432111 00111111111100 012444444443221
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH-CCc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE-YGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~-~gi 289 (464)
.....+++|||+.+ .+.+.........+.. ..+..++..++.|+|+ .|+
T Consensus 85 ---------------------------~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i 136 (296)
T cd06618 85 ---------------------------TDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGV 136 (296)
T ss_pred ---------------------------cCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence 12456799999865 5554433222233333 3456778889999997 699
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc----CCCCCCCCcchHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL----DFLSPDVDVTPIVPALR 365 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~D~~sl~~~l~ 365 (464)
+|+|++|.||+++.++.++|+|||++..+....... .. .+.+..++++.+.. +..+.+.|+|++|+.++
T Consensus 137 ~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~--~~-----~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~ 209 (296)
T cd06618 137 IHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT--RS-----AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLV 209 (296)
T ss_pred ecCCCcHHHEEEcCCCCEEECccccchhccCCCccc--CC-----CCCccccCHhhcCCCCCccccccchhHHHHHHHHH
Confidence 999999999999999999999999987764321110 00 01122233333322 22467899999999999
Q ss_pred HHHHH
Q 012411 366 NFFDD 370 (464)
Q Consensus 366 ~~~~~ 370 (464)
+++++
T Consensus 210 el~~g 214 (296)
T cd06618 210 ELATG 214 (296)
T ss_pred HHHhC
Confidence 99984
No 361
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.81 E-value=1.7e-20 Score=165.68 Aligned_cols=216 Identities=18% Similarity=0.189 Sum_probs=136.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+|-+-++..+|+..|||-++..+..+ ..+++..|+|...
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q--------------------------------~q~r~L~dldi~~ 99 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQ--------------------------------EQKRLLMDLDIIM 99 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcChH--------------------------------HHHHHHHhhhhhc
Confidence 56999999999999999999999999887443321 1123344444321
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccC--CCCceEEEeeecCcccCcHHH--HHhcC---CCHHHHHHHHHHHHHHHHHH
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVA--IESQG---LKVLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~--~~~~~---~~~~~~~~~~i~~~l~~lh~ 286 (464)
...+.-+....|..+ +...|+.||.++. +|+.+.. ....+ ++..-.+..-+..++.+||+
T Consensus 100 ------------r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~ 166 (282)
T KOG0984|consen 100 ------------RTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS 166 (282)
T ss_pred ------------cCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH
Confidence 111222223334333 5677999999964 6665422 22222 12222233345569999997
Q ss_pred C-CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 287 Y-GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 287 ~-gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
+ .++|||+||+||||+.+|++|++|||+++.+.++...+ -+|.- -+..||.+..+.-.-|| +-++|+||+|.++
T Consensus 167 kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCk---pYmaPEri~~e~n~~gY-~vksDvWSLGItm 242 (282)
T KOG0984|consen 167 KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCK---PYMAPERINPELNQKGY-SVKSDVWSLGITM 242 (282)
T ss_pred HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCC---ccCChhhcCcccCcccc-eeehhhhhhhhhh
Confidence 4 89999999999999999999999999999987664332 11211 23346665554433343 6789999999999
Q ss_pred HHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChH
Q 012411 365 RNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAY 402 (464)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~ 402 (464)
.|+...-++.+..... ++++.++..+-+..+|..
T Consensus 243 iElA~lr~PY~~w~tp----F~qLkqvVeep~P~Lp~~ 276 (282)
T KOG0984|consen 243 IEMAILRFPYESWGTP----FQQLKQVVEEPSPQLPAD 276 (282)
T ss_pred hhhhhccccccccCCH----HHHHHHHhcCCCCCCccc
Confidence 9998854433322223 344555555555666643
No 362
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.81 E-value=1.3e-19 Score=180.66 Aligned_cols=192 Identities=16% Similarity=0.167 Sum_probs=116.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhc-ccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDI-ITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.||+|++|.||+|.+..+|+.||||........... ...+...+..+... .|+|+..+++
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~-----~~~~~~E~~~l~~l~~h~ni~~~~~------------- 74 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATD-----AQRTFREIMFLQELGDHPNIVKLLN------------- 74 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchh-----hhhhhHHHHHHHHhcCCCCccceee-------------
Confidence 6799999999999999878999999987532111000 00000000001111 2333333222
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccC-CCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
++... ....++||||+++ +|.+..............+..++..++.++|+.|++|
T Consensus 75 -----------------------~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H 130 (337)
T cd07852 75 -----------------------VIKAENDKDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIH 130 (337)
T ss_pred -----------------------eeccCCCceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 11111 1245899999986 7765533221122233345677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHH----HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARF----AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
+|++|+||+++.+|.++|+|||++..+...... ..........+..||.+ ...+..+.++|+|++|+.++++
T Consensus 131 ~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~sDi~slG~~l~el 206 (337)
T cd07852 131 RDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEIL----LGSTRYTKGVDMWSVGCILGEM 206 (337)
T ss_pred CCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceee----eccccccccchHHHHHHHHHHH
Confidence 999999999999999999999998876432210 01111111112223322 1123346789999999999999
Q ss_pred HHHh
Q 012411 368 FDDA 371 (464)
Q Consensus 368 ~~~~ 371 (464)
+++.
T Consensus 207 ~tg~ 210 (337)
T cd07852 207 LLGK 210 (337)
T ss_pred HhCC
Confidence 9853
No 363
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.81 E-value=7.2e-20 Score=178.58 Aligned_cols=197 Identities=19% Similarity=0.219 Sum_probs=123.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.++.+|+.||||..+...... .+... +..
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-------------------------------~~~~~------~~~ 53 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-------------------------------GFPIT------SLR 53 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-------------------------------cchhh------HHH
Confidence 67999999999999998889999999986432110 00001 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCC--CCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (464)
|...+.++. ++++.-..-+.... ...+++|||+++ +|.+.........+. ...+..++..++.|+|+.|+
T Consensus 54 e~~~l~~l~-----h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 127 (293)
T cd07843 54 EINILLKLQ-----HPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI 127 (293)
T ss_pred HHHHHHhcC-----CCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222222221 22222111111112 567999999986 776654332222333 33455778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|++|+||+++.+|.++|+|||++..+...... .........+..||.+. .....+.+.|+|++|+.++++++
T Consensus 128 ~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~~----~~~~~~~~~Di~slG~~l~~l~~ 202 (293)
T cd07843 128 LHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP-YTQLVVTLWYRAPELLL----GAKEYSTAIDMWSVGCIFAELLT 202 (293)
T ss_pred eeccCCHHHEEECCCCcEEEeecCceeeccCCccc-cccccccccccCchhhc----CCccccchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999998876543111 01111122233444331 11223678999999999999998
Q ss_pred HhccCCCCcCc
Q 012411 370 DALNSSVSELN 380 (464)
Q Consensus 370 ~~~~~~~~~~~ 380 (464)
+ ..++...+
T Consensus 203 g--~~~f~~~~ 211 (293)
T cd07843 203 K--KPLFPGKS 211 (293)
T ss_pred C--CCCCCCCC
Confidence 4 34444443
No 364
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.81 E-value=5e-20 Score=180.78 Aligned_cols=206 Identities=20% Similarity=0.239 Sum_probs=122.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.||||+........ ..+...++.+ ..+....|++++.+++.+...
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~----~~l~~l~h~~iv~~~~~~~~~--------- 83 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREI----KILQLLKHENVVNLIEICRTK--------- 83 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHH----HHHHhCCCCCccceEEEEecc---------
Confidence 78999999999999998889999999875331110 0000011111 011122344444433211100
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
...+.......++||||+.+ ++.+.........+ ....+..++..++.|+|+.|++|
T Consensus 84 --------------------~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H 142 (310)
T cd07865 84 --------------------ATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILH 142 (310)
T ss_pred --------------------cccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 00011123455899999976 55544322211233 33445577888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHH---HHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARF---AIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
+|+||+||+++.++.++|+|||++..+...... ...+......+..||.+.. ....+.++|+|++|+.+++++
T Consensus 143 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~Di~slG~~l~el~ 218 (310)
T cd07865 143 RDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLG----ERDYGPPIDMWGAGCIMAEMW 218 (310)
T ss_pred cCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcC----CcccCchhhhHHHHHHHHHHH
Confidence 999999999999999999999999866432111 0001111122334443311 112367899999999999999
Q ss_pred HHhccCCCCcCc
Q 012411 369 DDALNSSVSELN 380 (464)
Q Consensus 369 ~~~~~~~~~~~~ 380 (464)
++. .++...+
T Consensus 219 t~~--~~~~~~~ 228 (310)
T cd07865 219 TRS--PIMQGNT 228 (310)
T ss_pred hCC--CCCCCCC
Confidence 743 4444433
No 365
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2.5e-20 Score=183.42 Aligned_cols=224 Identities=17% Similarity=0.185 Sum_probs=160.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..+|-|+||.|-.+..+.....+|+|++++. .++.- .-.+.+..|-+.+.
T Consensus 426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~----------------------------hIVdt--kQqeHv~sEr~Im~ 475 (732)
T KOG0614|consen 426 ATLGVGGFGRVELVKVNSQKATFALKILKKK----------------------------HIVDT--KQQEHVFSERNIMM 475 (732)
T ss_pred hhcccCccceEEEEEecccchHHHHHHHhHh----------------------------hccch--hHHHHHHhHHHHHH
Confidence 4699999999999988633334788877532 00000 01123344444444
Q ss_pred HH--HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EG--QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea--~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
+. .-+.++++.|.+.++|| +.||-|=||.|-.+..-+ ....+..+.+...+..+++|||++||+
T Consensus 476 ~~~s~fIvrLYrTfrd~kyvY-------------mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iI 542 (732)
T KOG0614|consen 476 ECRSDFIVRLYRTFRDSKYVY-------------MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGII 542 (732)
T ss_pred hcCchHHHHHHHHhccchhhh-------------hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCce
Confidence 43 35677888887777665 999999999998764422 223456667777777899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
.||+||+|++++.+|-+||.|||.++.+....+ .++||+ ||++++++.---.-+..+|.|++|..++|++.
T Consensus 543 YRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGT--------pEYVAPEIILnKGHD~avDyWaLGIli~ELL~ 614 (732)
T KOG0614|consen 543 YRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGT--------PEYVAPEIILNKGHDRAVDYWALGILIYELLT 614 (732)
T ss_pred eccCChhheeeccCCceEEeehhhHHHhccCCceeeecCC--------cccccchhhhccCcchhhHHHHHHHHHHHHHc
Confidence 999999999999999999999999999865543 446655 88888776543334678999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHH--hhCCCCCChHHHHHHHHH
Q 012411 370 DALNSSVSELNFKTIVDGLGAVL--YQYPFNVPAYYALILRSL 410 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~p~~~~~l~r~l 410 (464)
.++|++..+--..-..|.+.+ ..+|-.++.....++|.+
T Consensus 615 --G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~L 655 (732)
T KOG0614|consen 615 --GSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKL 655 (732)
T ss_pred --CCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHH
Confidence 568888766433333343333 356777888888888887
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.81 E-value=5.1e-20 Score=182.82 Aligned_cols=205 Identities=17% Similarity=0.197 Sum_probs=129.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|+...+|+.||||+..+..... ...+.+...+..+....|+++..+.+.+...
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL-----IDAKRILREIKLLRHLRHENIIGLLDILRPP--------- 71 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccc-----hhhhhHHHHHHHHHhcCCcchhhhhhhhccc---------
Confidence 67999999999999998789999999987543210 1111111112222233466666655533211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.. ...+..+++|||+++ +|.+..... ...+ ....+..++..++.++|+.|++|
T Consensus 72 ---------------~~--------~~~~~~~lv~e~~~~-~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~gi~H 126 (330)
T cd07834 72 ---------------SP--------EDFNDVYIVTELMET-DLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSANVIH 126 (330)
T ss_pred ---------------Cc--------ccccceEEEecchhh-hHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 00 011345899999985 665543221 1233 33345677888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+||+||+++.++.++|+|||++........ ...........+..||.+.. ....+.+.|+|++|+.++++++
T Consensus 127 ~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~sDi~slG~il~~l~~ 202 (330)
T cd07834 127 RDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLS----SSRYTKAIDIWSVGCIFAELLT 202 (330)
T ss_pred CCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeec----ccCCCcchhHHHHHHHHHHHHc
Confidence 99999999999999999999999987654321 00111111222334443321 1145778999999999999998
Q ss_pred HhccCCCCcCcHHH
Q 012411 370 DALNSSVSELNFKT 383 (464)
Q Consensus 370 ~~~~~~~~~~~~~~ 383 (464)
+ ..++...+..+
T Consensus 203 g--~~pf~~~~~~~ 214 (330)
T cd07834 203 R--KPLFPGRDYID 214 (330)
T ss_pred C--CCCcCCCCHHH
Confidence 4 44555444433
No 367
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.81 E-value=8.2e-20 Score=165.51 Aligned_cols=195 Identities=17% Similarity=0.162 Sum_probs=135.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|.|+|+-||.+....+++.+|+|.+.....+. . ....+.++....++++|+..+++.. +..|-|
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~----~---e~~~rEid~~rkf~s~~vl~l~dh~---l~~~~D--- 93 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQED----I---EEALREIDNHRKFNSPNVLRLVDHQ---LREEKD--- 93 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccchHH----H---HHHHHHHHHHHhhCCcchHHHHHHH---HHhhcc---
Confidence 67999999999999988899999999886553222 2 1222233344456688888887753 333332
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-c--CCCHHHH--HHHHHHHHHHHHHHCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-Q--GLKVLDL--VNTGIQCSLRQLLEYG 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~--~~~~~~~--~~~~i~~~l~~lh~~g 288 (464)
.+...||+..|...|+|.+...... . -.+..+. +..++..|++++|+..
T Consensus 94 --------------------------~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~ 147 (302)
T KOG2345|consen 94 --------------------------GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE 147 (302)
T ss_pred --------------------------CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC
Confidence 2345689999999889888654322 2 2445544 4566778999999999
Q ss_pred --cccCCCCCcceEEccCCcEEEEecCCCCcCCHH---HHHH-----HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 012411 289 --YFHADPHPGNLLATPEGKLAFLDFGMMSETPEE---ARFA-----IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (464)
Q Consensus 289 --i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~ 358 (464)
+.|+|+||+||++.+++.+++.|||.+...+-. .++. -+.---++.++.||...- -....++.++|+|
T Consensus 148 ~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~v--k~~~ti~ertDIW 225 (302)
T KOG2345|consen 148 PPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNV--KSHCTITERTDIW 225 (302)
T ss_pred CcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheec--ccCcccccccchh
Confidence 999999999999999999999999998865321 1111 111222344556654321 1233568899999
Q ss_pred hHHHHHHHHHH
Q 012411 359 PIVPALRNFFD 369 (464)
Q Consensus 359 sl~~~l~~~~~ 369 (464)
|+||++|.|+-
T Consensus 226 SLGCtLYa~mf 236 (302)
T KOG2345|consen 226 SLGCTLYAMMF 236 (302)
T ss_pred hhhHHHHHHHH
Confidence 99999999886
No 368
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.81 E-value=2.1e-19 Score=173.74 Aligned_cols=191 Identities=21% Similarity=0.247 Sum_probs=127.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|+...+|+.||+|+......+ ....++..+ ....|+++..+.+.+..
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l----------~~~~~~~i~~~~~~~~~----- 69 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLL----------KELKHPNIVKLLDVIHT----- 69 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHH----------HhcCCCCHHHHHhhhhc-----
Confidence 5699999999999999888999999998765311 111111111 12235666555543321
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLE 286 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~ 286 (464)
....++||||+++ +|.+.........+.. ..+..++..++.++|+
T Consensus 70 --------------------------------~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 116 (282)
T cd07829 70 --------------------------------ERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHS 116 (282)
T ss_pred --------------------------------CCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1456799999986 7877654332233433 3444667789999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALR 365 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~D~~sl~~~l~ 365 (464)
.|++|+|++|.||+++.++.++|+|||.+......... .........+..||.+ ..+ ..+.+.|+|++|+.++
T Consensus 117 ~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~aPE~~-----~~~~~~~~~~Dv~slG~~l~ 190 (282)
T cd07829 117 HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT-YTHEVVTLWYRAPEIL-----LGSKHYSTAVDIWSVGCIFA 190 (282)
T ss_pred CCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc-cCccccCcCcCChHHh-----cCCcCCCccccHHHHHHHHH
Confidence 99999999999999999999999999998776433211 1111111223344433 222 4577899999999999
Q ss_pred HHHHHhccCCCCcCc
Q 012411 366 NFFDDALNSSVSELN 380 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~ 380 (464)
+++.+ ..++...+
T Consensus 191 ~l~~~--~~~~~~~~ 203 (282)
T cd07829 191 EMITG--KPLFPGDS 203 (282)
T ss_pred HHHhC--CCCCCCcc
Confidence 99985 34444433
No 369
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.81 E-value=6.4e-20 Score=180.10 Aligned_cols=199 Identities=14% Similarity=0.118 Sum_probs=123.0
Q ss_pred cccccceecEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|++|+||+|.+..+|+ .||+|+..+........+ ..+.+ ..+....|+|++.+++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~--~~~e~----~~~~~l~h~niv~~~~---------- 76 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE--FMDEA----LIMASMDHPHLVRLLG---------- 76 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHH--HHHHH----HHHHhCCCCCcccEEE----------
Confidence 679999999999999876776 578888765422211000 00000 0011112333222211
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHC
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~ 287 (464)
.+ .....+++|||+++++|.+............ ..+..++..++.|+|+.
T Consensus 77 --------------------------~~--~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~ 128 (303)
T cd05110 77 --------------------------VC--LSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 128 (303)
T ss_pred --------------------------EE--cCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 11 1234569999999999988754332223333 34456788899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH-HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA-IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
|++|+|+||+||+++.++.++|+|||++..+....... ..+......+..|+. ......+.++|+||+|+.+++
T Consensus 129 ~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~-----~~~~~~~~~~DiwslG~~l~e 203 (303)
T cd05110 129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC-----IHYRKFTHQSDVWSYGVTIWE 203 (303)
T ss_pred CeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHH-----hccCCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998765332110 001111122333443 333445778999999999999
Q ss_pred HHHHhccCCCCcCcHH
Q 012411 367 FFDDALNSSVSELNFK 382 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~ 382 (464)
+++ +...|+.+....
T Consensus 204 l~t-~g~~p~~~~~~~ 218 (303)
T cd05110 204 LMT-FGGKPYDGIPTR 218 (303)
T ss_pred HHh-CCCCCCCCCCHH
Confidence 887 233455544433
No 370
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.81 E-value=3.2e-20 Score=184.39 Aligned_cols=199 Identities=12% Similarity=0.101 Sum_probs=119.0
Q ss_pred ccccc--eecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 135 PIAAA--SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 135 pig~G--s~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.||.| ++|+||+|.+..+|+.||||+........ ...+.++....+ .....|+|++.+.+
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~--~~~~~~~~e~~~---~~~l~h~niv~~~~------------- 66 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE--EHLKALQNEVVL---SHFFRHPNIMTSWT------------- 66 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH--HHHHHHHHHHHH---HHhCCCCCcceEee-------------
Confidence 35555 99999999998899999999986432111 000111111110 01112333332222
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHH--HHHHHHHHHHHHHHHCCc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLD--LVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~--~~~~~i~~~l~~lh~~gi 289 (464)
+.......+++|||+.|+++.+..... ..+.+... .+..++..++.|+|+.|+
T Consensus 67 ------------------------~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 122 (328)
T cd08226 67 ------------------------VFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY 122 (328)
T ss_pred ------------------------eEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 112235568999999999998764432 12344333 455678889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHH----HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGH----VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPA 363 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~ 363 (464)
+|+|+||+||+++.++.+++.|||.+....... ....... .....+..||.+... ....+..+|+|++|+.
T Consensus 123 vHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~~~DiwslG~~ 199 (328)
T cd08226 123 IHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQD---LYGYNVKSDIYSVGIT 199 (328)
T ss_pred ecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCC---CCCCCchhhHHHHHHH
Confidence 999999999999999999999998654321110 0000000 000112334433211 1224678999999999
Q ss_pred HHHHHHHhccCCCCcCc
Q 012411 364 LRNFFDDALNSSVSELN 380 (464)
Q Consensus 364 l~~~~~~~~~~~~~~~~ 380 (464)
+++++++ ..|+....
T Consensus 200 l~el~~g--~~p~~~~~ 214 (328)
T cd08226 200 ACELATG--RVPFQDML 214 (328)
T ss_pred HHHHHhC--CCCCCCcC
Confidence 9999984 34554443
No 371
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.81 E-value=2.2e-19 Score=176.37 Aligned_cols=191 Identities=16% Similarity=0.130 Sum_probs=120.0
Q ss_pred CcccccceecEEEEEEEc-----cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLK-----YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQ 207 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~-----~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 207 (464)
.+.||.|+||+||+|+.. .++..||||+.+........ +.+.+
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------------~~~~~ 87 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER--------------------------------EALMS 87 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH--------------------------------HHHHH
Confidence 378999999999999852 24568999998754221100 01111
Q ss_pred HhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC-CCHH--HHHHHHHHHHHHHH
Q 012411 208 ELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-LKVL--DLVNTGIQCSLRQL 284 (464)
Q Consensus 208 Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-~~~~--~~~~~~i~~~l~~l 284 (464)
|...+.++ .+++++.--.-+.......+++|||+.|++|.++....... .+.. ..+..++..++.|+
T Consensus 88 ------E~~~l~~l----~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~l 157 (302)
T cd05055 88 ------ELKIMSHL----GNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFL 157 (302)
T ss_pred ------HHHHHHhc----cCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11111111 11122111111222345678999999999998875432211 3333 33446788899999
Q ss_pred HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
|+.|++|+|+||+||+++.++.++++|||++..+.........+. ....+..++++....+..+.++|+|++|+.+
T Consensus 158 H~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 233 (302)
T cd05055 158 ASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGN----ARLPVKWMAPESIFNCVYTFESDVWSYGILL 233 (302)
T ss_pred HHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCC----CCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence 999999999999999999999999999999886643321100110 0111223334444445567789999999999
Q ss_pred HHHHH
Q 012411 365 RNFFD 369 (464)
Q Consensus 365 ~~~~~ 369 (464)
+++++
T Consensus 234 ~el~t 238 (302)
T cd05055 234 WEIFS 238 (302)
T ss_pred HHHHh
Confidence 99986
No 372
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.81 E-value=6.4e-20 Score=177.82 Aligned_cols=191 Identities=23% Similarity=0.264 Sum_probs=120.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||.|++|+||+|.++.+|..||||+....... .+..++..++ ...|++++++.+.+.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~----------~l~~~~iv~~~~~~~------ 68 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLK----------ELNHPNIVRLLDVVH------ 68 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHH----------hcCCCCccCHhheec------
Confidence 6799999999999999889999999998644211 1111111111 122444444433211
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHH--HHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVL--DLVNTGIQCSLRQLL 285 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~--~~~~~~i~~~l~~lh 285 (464)
.....+++|||+++ +|.+...... ...+.. ..+..++..++.++|
T Consensus 69 -------------------------------~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH 116 (283)
T cd07835 69 -------------------------------SENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH 116 (283)
T ss_pred -------------------------------cCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12456899999964 7766543222 123333 344567778999999
Q ss_pred HCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 286 EYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 286 ~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
+.|++|+|++|+||+++.++.++|+|||++..+....... ........+..||.+. .....+.+.|+|++|+.++
T Consensus 117 ~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~aPE~~~----~~~~~~~~~Di~slG~~l~ 191 (283)
T cd07835 117 SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY-THEVVTLWYRAPEILL----GSRQYSTPVDIWSIGCIFA 191 (283)
T ss_pred HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc-CccccccCCCCCceee----cCcccCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999987654321110 0000111222333221 1123466799999999999
Q ss_pred HHHHHhccCCCCcC
Q 012411 366 NFFDDALNSSVSEL 379 (464)
Q Consensus 366 ~~~~~~~~~~~~~~ 379 (464)
+++++. .++...
T Consensus 192 ~l~~g~--~pf~~~ 203 (283)
T cd07835 192 EMVNRR--PLFPGD 203 (283)
T ss_pred HHHhCC--CCCCCC
Confidence 999853 444433
No 373
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.81 E-value=3.5e-19 Score=177.34 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=92.6
Q ss_pred CCCceEEEeeecCcccCcHHHHHh---------------cCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEcc
Q 012411 241 TSGKVLTMEWVEGVKLNEQVAIES---------------QGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATP 303 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~ 303 (464)
....+++|||++|++|.++..... ...... ..+..++..++.|+|+.|++|+|+||.||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 345789999999999988754321 012222 234567888999999999999999999999999
Q ss_pred CCcEEEEecCCCCcCCHHHHHHHH-HHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHH
Q 012411 304 EGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFK 382 (464)
Q Consensus 304 ~g~i~l~DFGl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~ 382 (464)
++.++|+|||+++.+......... .......+..|| .+..+..+.+.|+|++|+.+++++.. ...++...+..
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~il~el~~~-g~~p~~~~~~~ 243 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPE-----ALFDRVYTHQSDVWSFGVLLWEIFTL-GGSPYPGIPVE 243 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceEcCHH-----HhccCCcCchhhhHHHHHHHHHHHhc-CCCCCCCCCHH
Confidence 999999999998765432111000 000001223333 33344457789999999999999862 22445555544
Q ss_pred HHHH
Q 012411 383 TIVD 386 (464)
Q Consensus 383 ~~~~ 386 (464)
++..
T Consensus 244 ~~~~ 247 (334)
T cd05100 244 ELFK 247 (334)
T ss_pred HHHH
Confidence 4443
No 374
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.81 E-value=7e-20 Score=175.92 Aligned_cols=200 Identities=16% Similarity=0.104 Sum_probs=123.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|.+..+|+.||+|+......... ..... . .+.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~--------------------------~------~~~~ 53 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE--TSKEV--------------------------N------ALEC 53 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccch--hhHHH--------------------------H------HHHH
Confidence 689999999999999988899999998753211100 00000 0 1112
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccC-CCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|...+.++. +..-+.+...+... ....+++|||++|++|.+..... ...+ ....+..++..++.++|+.|++
T Consensus 54 ei~~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i~ 128 (264)
T cd06653 54 EIQLLKNLR----HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNMIV 128 (264)
T ss_pred HHHHHHHcC----CCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 222222221 11111111122111 23467999999999998764322 2223 3334556788899999999999
Q ss_pred cCCCCCcceEEccCCcEEEEecCCCCcCCHHHH--HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 291 HADPHPGNLLATPEGKLAFLDFGMMSETPEEAR--FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 291 H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
|+|+||+||+++.++.++|+|||++..+..... ...........+..|| .......+.++|+|++|+.+++++
T Consensus 129 H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE-----~~~~~~~~~~~Di~slG~il~~l~ 203 (264)
T cd06653 129 HRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPE-----VISGEGYGRKADVWSVACTVVEML 203 (264)
T ss_pred cCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHh-----hhcCCCCCccccHHHHHHHHHHHH
Confidence 999999999999999999999999987532110 0000011112223343 333334567899999999999999
Q ss_pred HHhccCCCCcC
Q 012411 369 DDALNSSVSEL 379 (464)
Q Consensus 369 ~~~~~~~~~~~ 379 (464)
++ ..|+...
T Consensus 204 ~g--~~p~~~~ 212 (264)
T cd06653 204 TE--KPPWAEY 212 (264)
T ss_pred hC--CCCCCcc
Confidence 83 4555443
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.81 E-value=2.5e-20 Score=176.40 Aligned_cols=173 Identities=16% Similarity=0.119 Sum_probs=114.5
Q ss_pred ceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHH
Q 012411 139 ASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNA 218 (464)
Q Consensus 139 Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~ 218 (464)
|++|.||+|+++.+|+.||+|+++..... ... .+.+ ....|+++..+.+.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~--~~~---~~~~-------~~~~~~~i~~~~~~~~---------------- 55 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY--SRE---RLTI-------IPHCVPNMVCLHKYIV---------------- 55 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh--hhH---HHHH-------HhcCCCceeehhhhee----------------
Confidence 88999999999989999999998754211 000 0000 0112344443333211
Q ss_pred HHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCC
Q 012411 219 RRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHP 296 (464)
Q Consensus 219 ~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp 296 (464)
.....+++|||++|++|.+.... ..+.+.. ..+..++..++.++|+.|++|+|+||
T Consensus 56 ---------------------~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp 113 (237)
T cd05576 56 ---------------------SEDSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNP 113 (237)
T ss_pred ---------------------cCCeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 12456799999999999876432 2234333 33446677899999999999999999
Q ss_pred cceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 297 GNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 297 ~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
.||+++.++.++++|||.+..+...... ......+..|| ....+..+++.|+|++|+.+++++++
T Consensus 114 ~Nil~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~y~aPE-----~~~~~~~~~~~DvwslG~il~el~~g 178 (237)
T cd05576 114 NNILLDDRGHIQLTYFSRWSEVEDSCDG----EAVENMYCAPE-----VGGISEETEACDWWSLGAILFELLTG 178 (237)
T ss_pred HHEEEcCCCCEEEecccchhcccccccc----CCcCccccCCc-----ccCCCCCCchhhHHHHHHHHHHHHHC
Confidence 9999999999999999987665432111 00011122233 33333446789999999999999984
No 376
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.81 E-value=1.5e-19 Score=178.03 Aligned_cols=186 Identities=19% Similarity=0.256 Sum_probs=115.2
Q ss_pred cccccceecEEEEEEEcc--CCcEEEEEEecCChH------HHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY--SGQIVAVKVQRPGIE------EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRV 205 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~--~g~~VAVKv~~p~~~------~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 205 (464)
+.||+|++|.||+|.... +|+.||||+..+... .....++.+++ ...|++++.+.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~----------~l~h~~i~~~~~------ 69 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLR----------ELKHENVVSLVE------ 69 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHH----------hcCCCCccceEE------
Confidence 569999999999999987 789999999876421 11111111111 112333322221
Q ss_pred HHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccC-CCCceEEEeeecCcccCcHHHHHh---c-CCC--HHHHHHHHHH
Q 012411 206 YQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIES---Q-GLK--VLDLVNTGIQ 278 (464)
Q Consensus 206 ~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~---~-~~~--~~~~~~~~i~ 278 (464)
.+.+. ....++||||+++ ++.+...... . .+. ....+..++.
T Consensus 70 ------------------------------~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 118 (316)
T cd07842 70 ------------------------------VFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQIL 118 (316)
T ss_pred ------------------------------EEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHH
Confidence 11111 1456899999987 4443322111 1 222 2334556788
Q ss_pred HHHHHHHHCCcccCCCCCcceEEcc----CCcEEEEecCCCCcCCHHHHHHH--HHHHHHHHhcCHHHHHHHHHHcCCCC
Q 012411 279 CSLRQLLEYGYFHADPHPGNLLATP----EGKLAFLDFGMMSETPEEARFAI--IGHVVHMVNRDYEAMARDYYALDFLS 352 (464)
Q Consensus 279 ~~l~~lh~~gi~H~Dlkp~Nili~~----~g~i~l~DFGl~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (464)
.++.|+|+.|++|+|+||.||+++. +|.++|+|||++..+........ ........+..||.+. .....+
T Consensus 119 ~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~ 194 (316)
T cd07842 119 NGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLL----GARHYT 194 (316)
T ss_pred HHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHh----CCCCCC
Confidence 8999999999999999999999998 89999999999887643321100 0001111223344321 112346
Q ss_pred CCCCcchHHHHHHHHHHH
Q 012411 353 PDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 353 ~~~D~~sl~~~l~~~~~~ 370 (464)
.++|+|++|+.+++++++
T Consensus 195 ~~~Dv~slG~~l~~l~~~ 212 (316)
T cd07842 195 KAIDIWAIGCIFAELLTL 212 (316)
T ss_pred cHHHHHHHHHHHHHHHhc
Confidence 789999999999999984
No 377
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.80 E-value=1.6e-19 Score=176.26 Aligned_cols=196 Identities=17% Similarity=0.182 Sum_probs=118.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|++|.||+|.+..+|+.||||..+...... ...+. +..
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~~~~------~~~ 50 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-------------------------------GVPST------AIR 50 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-------------------------------cchHH------HHH
Confidence 67999999999999998889999999875321100 00000 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCH--HHHHHHHHHHHHHHHHHCCcc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKV--LDLVNTGIQCSLRQLLEYGYF 290 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~--~~~~~~~i~~~l~~lh~~gi~ 290 (464)
|+..+.++ . ++++.-..-+.......++||||+++ ++.+..... ....+. ...+..++..++.++|+.|++
T Consensus 51 e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~ 124 (294)
T PLN00009 51 EISLLKEM----Q-HGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVL 124 (294)
T ss_pred HHHHHHhc----c-CCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 22222222 1 22222111122234567999999975 555443221 111222 224556788899999999999
Q ss_pred cCCCCCcceEEcc-CCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 291 HADPHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 291 H~Dlkp~Nili~~-~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
|+|++|+||+++. ++.++|+|||++......... .........+..||.+. .....+.++|+|++|+.++++++
T Consensus 125 H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~~PE~~~----~~~~~~~~~Dv~slG~i~~~l~t 199 (294)
T PLN00009 125 HRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT-FTHEVVTLWYRAPEILL----GSRHYSTPVDIWSVGCIFAEMVN 199 (294)
T ss_pred CCCCCcceEEEECCCCEEEEcccccccccCCCccc-cccCceeecccCHHHHh----CCCCCCcHHHHHHHHHHHHHHHh
Confidence 9999999999985 567999999998765322110 00001112233444331 11235678999999999999998
Q ss_pred HhccCCCCcC
Q 012411 370 DALNSSVSEL 379 (464)
Q Consensus 370 ~~~~~~~~~~ 379 (464)
+ ..++...
T Consensus 200 g--~~pf~~~ 207 (294)
T PLN00009 200 Q--KPLFPGD 207 (294)
T ss_pred C--CCCCCCC
Confidence 4 3444433
No 378
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.80 E-value=1e-19 Score=176.37 Aligned_cols=199 Identities=21% Similarity=0.251 Sum_probs=122.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHH-----HHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA-----IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~-----~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|+++.+|+.||||+.+...... ...++.+++.+ ....|+++..+++
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-------~~~~h~~i~~~~~--------- 68 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQL-------ESFEHPNIVRLLD--------- 68 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHh-------hccCCCCcceEEE---------
Confidence 57999999999999998779999999987432211 00111111111 1111222222211
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeecc----CCCCceEEEeeecCcccCcHHHHHh-cCCCH--HHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWD----YTSGKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSL 281 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l 281 (464)
.+.. .+...+++|||+++ +|.+...... ...+. ...+..++..++
T Consensus 69 ---------------------------~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al 120 (287)
T cd07838 69 ---------------------------VCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGV 120 (287)
T ss_pred ---------------------------EEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHH
Confidence 1111 11236899999986 6665533221 12333 334556777899
Q ss_pred HHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 012411 282 RQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (464)
Q Consensus 282 ~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~ 361 (464)
.++|+.|++|+|++|+||+++.++.++|+|||.+..+...... ........+..||. ...+..+.+.|+|++|
T Consensus 121 ~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~PE~-----~~~~~~~~~~Di~s~G 193 (287)
T cd07838 121 DFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMAL--TSVVVTLWYRAPEV-----LLQSSYATPVDMWSVG 193 (287)
T ss_pred HHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCccc--ccccccccccChHH-----hccCCCCCcchhhhHH
Confidence 9999999999999999999999999999999998776433110 01111112233443 3334457789999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHH
Q 012411 362 PALRNFFDDALNSSVSELNFKTIV 385 (464)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~ 385 (464)
+.+++++++ ..++...+..+..
T Consensus 194 ~~l~~l~~~--~~~~~~~~~~~~~ 215 (287)
T cd07838 194 CIFAELFRR--RPLFRGTSEADQL 215 (287)
T ss_pred HHHHHHHhC--CCcccCCChHHHH
Confidence 999999984 4455544433333
No 379
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.80 E-value=4.1e-19 Score=173.03 Aligned_cols=194 Identities=18% Similarity=0.241 Sum_probs=117.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|.||+|....+|+.||||+.+....+... ..+.+
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~--------------------------------------~~~~~ 52 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVP--------------------------------------FTAIR 52 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCc--------------------------------------HHHHH
Confidence 7899999999999999888999999998643211100 00111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|+..+..+ +++++.-..-+.......++||||+.+ ++.+.......... ....+..++..++.++|+.|++|
T Consensus 53 e~~~l~~l-----~h~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 126 (291)
T cd07870 53 EASLLKGL-----KHANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILH 126 (291)
T ss_pred HHHHHHhc-----CCCCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 22111211 122322222222334567899999975 55443222222222 33445567888999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|+||+||+++.+|.++|+|||++.......... ........+..||... .....+.+.|+|++|+.+++++++.
T Consensus 127 ~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~-~~~~~~~~y~aPE~~~----~~~~~~~~~Dv~slG~~l~~l~~g~ 201 (291)
T cd07870 127 RDLKPQNLLISYLGELKLADFGLARAKSIPSQTY-SSEVVTLWYRPPDVLL----GATDYSSALDIWGAGCIFIEMLQGQ 201 (291)
T ss_pred CCCChHHEEEcCCCcEEEeccccccccCCCCCCC-CCccccccccCCceee----cCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999987542211100 0000111222333221 1112356789999999999999843
Q ss_pred ccCCCCc
Q 012411 372 LNSSVSE 378 (464)
Q Consensus 372 ~~~~~~~ 378 (464)
.++..
T Consensus 202 --~~f~~ 206 (291)
T cd07870 202 --PAFPG 206 (291)
T ss_pred --CCCCC
Confidence 44443
No 380
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.80 E-value=9.9e-19 Score=161.03 Aligned_cols=161 Identities=19% Similarity=0.182 Sum_probs=108.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHH--HHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA--IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~--~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
++||+|++|+||+|... +|+.||||+.+++.... ...+.+.+. ...+.+. ... .+..+
T Consensus 21 ~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~----------~~~~~~~---~~~------~~~~~ 80 (198)
T cd05144 21 NQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLG----------DRKHASW---LYL------SRLAA 80 (198)
T ss_pred CccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHh----------ccccchh---HHH------hHHHH
Confidence 78999999999999987 89999999987653110 000000000 0001111 111 11223
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
..|...+..+.+. .+.+|.++.. ...++||||++|++|.+.... .....+..++..++.++|..|++|
T Consensus 81 ~~E~~~l~~l~~~-----~i~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~gi~H 148 (198)
T cd05144 81 QKEFAALKALYEE-----GFPVPKPIDW--NRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKHGIIH 148 (198)
T ss_pred HHHHHHHHHHHHc-----CCCCCceeec--CCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHCCCCc
Confidence 4455555555432 2456776653 566999999999998765221 122334466777899999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI 326 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~ 326 (464)
+|+||+||+++++++++|+|||++.....+.+..+
T Consensus 149 ~Dl~p~Nill~~~~~~~liDfg~~~~~~~~~~~~~ 183 (198)
T cd05144 149 GDLSEFNILVDDDEKIYIIDWPQMVSTDHPNAEEL 183 (198)
T ss_pred CCCCcccEEEcCCCcEEEEECCccccCCCccHHHH
Confidence 99999999999999999999999998887766654
No 381
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.80 E-value=8.3e-20 Score=175.70 Aligned_cols=206 Identities=17% Similarity=0.176 Sum_probs=125.6
Q ss_pred cccccceecEEEEEEEcc-CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKY-SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.||+|++|.||+|.+.. +++.||||..+.........+ ... +.....+..|+...
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~------------------~~~-----~~~~~~~~~e~~~l 62 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDK------------------RER-----DKSIGDIVSEVTII 62 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeecccccccccc------------------ccc-----hHHHHHHHHHHHHH
Confidence 679999999999999986 578999998864321110000 000 00000111111111
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH---HhcCCCHH--HHHHHHHHHHHHHHHH-
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI---ESQGLKVL--DLVNTGIQCSLRQLLE- 286 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~---~~~~~~~~--~~~~~~i~~~l~~lh~- 286 (464)
.... +++++.-+.-+.......+++|||++|++|.+.... .....+.. ..+..++..++.++|.
T Consensus 63 ---------~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 132 (269)
T cd08528 63 ---------KEQL-RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE 132 (269)
T ss_pred ---------hhcC-CCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC
Confidence 1111 223332222222334567999999999999876432 11223333 2334567789999996
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
.|++|+|++|+||+++.++.++|+|||++........ .........+..|+.+ ..+..+.+.|+|++|+.+++
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~Pe~~-----~~~~~~~~~Dv~slG~ll~~ 205 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK--LTSVVGTILYSCPEIV-----KNEPYGEKADVWAFGCILYQ 205 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEecccceeecccccc--cccccCcccCcChhhh-----cCCCCchHHHHHHHHHHHHH
Confidence 7899999999999999999999999999987654421 1111112223344433 34455788999999999999
Q ss_pred HHHHhccCCCCcCcH
Q 012411 367 FFDDALNSSVSELNF 381 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (464)
++++ ..|+...+.
T Consensus 206 l~~g--~~p~~~~~~ 218 (269)
T cd08528 206 MCTL--QPPFYSTNM 218 (269)
T ss_pred HHhC--CCcccccCH
Confidence 9984 345444333
No 382
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.80 E-value=1.8e-19 Score=179.38 Aligned_cols=206 Identities=19% Similarity=0.216 Sum_probs=123.0
Q ss_pred cccccceecEEEEEEEccC--CcEEEEEEecCChHHH-----HHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYS--GQIVAVKVQRPGIEEA-----IGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVY 206 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~--g~~VAVKv~~p~~~~~-----~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 206 (464)
+.||+|++|.||+|+...+ |..||||+........ ...++.+++.+ ..|+|++.+++.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l---------~~h~~iv~~~~~------ 70 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHF---------RGHKNITCLYDM------ 70 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHh---------cCCCChheeeee------
Confidence 6799999999999999877 8899999876432110 00011111000 012333222210
Q ss_pred HHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHH
Q 012411 207 QELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQL 284 (464)
Q Consensus 207 ~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~l 284 (464)
...........+++|||+.+ +|.+.... ....+ ....+..++..++.++
T Consensus 71 ---------------------------~~~~~~~~~~~~~~~e~~~~-~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~L 121 (332)
T cd07857 71 ---------------------------DIVFPGNFNELYLYEELMEA-DLHQIIRS-GQPLTDAHFQSFIYQILCGLKYI 121 (332)
T ss_pred ---------------------------eeeccccCCcEEEEEecccC-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 00011112345799999875 66655321 22233 3344557788899999
Q ss_pred HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH---HHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHH
Q 012411 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA---IIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIV 361 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~ 361 (464)
|+.|++|+|+||+||+++.++.++|+|||++..+....... ......+..+..||.+. .....+.++|+|++|
T Consensus 122 H~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~~Di~slG 197 (332)
T cd07857 122 HSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIML----SFQSYTKAIDVWSVG 197 (332)
T ss_pred HhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHh----CCCCCCcHHHHHHHH
Confidence 99999999999999999999999999999998764322110 00011112233444331 111246789999999
Q ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHH
Q 012411 362 PALRNFFDDALNSSVSELNFKTIVDGLG 389 (464)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 389 (464)
+.+++++.+ ..++...+....+..+.
T Consensus 198 v~l~~l~~g--~~pf~~~~~~~~~~~~~ 223 (332)
T cd07857 198 CILAELLGR--KPVFKGKDYVDQLNQIL 223 (332)
T ss_pred HHHHHHHhC--CcCCCCCCHHHHHHHHH
Confidence 999999873 35555555444444333
No 383
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.80 E-value=4.7e-20 Score=192.03 Aligned_cols=271 Identities=19% Similarity=0.243 Sum_probs=166.2
Q ss_pred HHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHH--HHHHHHHHHHHHHHHHhchhcccCCHHHHHHHH
Q 012411 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEA--IGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (464)
Q Consensus 124 ~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~--~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (464)
..+.|+.+ +.||.|.+|+||+++.+.+|+.+|||++.|..... ++.+.++++
T Consensus 17 p~d~~ei~--evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~------------------------ 70 (953)
T KOG0587|consen 17 PADIFEII--EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLK------------------------ 70 (953)
T ss_pred CCCccEEE--EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHH------------------------
Confidence 44455554 78999999999999999999999999998874332 222222222
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeec-----cCCCCceEEEeeecCcccCcHHHHHhcCCC----HHHH
Q 012411 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFW-----DYTSGKVLTMEWVEGVKLNEQVAIESQGLK----VLDL 272 (464)
Q Consensus 202 ~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~-----~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~----~~~~ 272 (464)
.+.+++++..-.-+. .-..+.|||||||.||++.|+...-. +.. ....
T Consensus 71 ----------------------~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaY 127 (953)
T KOG0587|consen 71 ----------------------KYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAY 127 (953)
T ss_pred ----------------------hccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHH
Confidence 122222221111111 12356799999999999999755332 322 2223
Q ss_pred HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHH--HHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 012411 273 VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEA--RFAIIGHVVHMVNRDYEAMARDYYALDF 350 (464)
Q Consensus 273 ~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (464)
+.+.+..++.++|...++|||+|-.|||++.+|.|||.|||.+.+++... |.+++|+...|+ ||.++.+--.-.-
T Consensus 128 I~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMA---PEViac~e~~d~t 204 (953)
T KOG0587|consen 128 ILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMA---PEVIACDESPDAT 204 (953)
T ss_pred HHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCccccc---ceeeecccCCCCC
Confidence 34556669999999999999999999999999999999999999987653 344455433332 3333322111112
Q ss_pred CCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHH---HHHHHHHHHHHhhcccCCCCChH
Q 012411 351 LSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYA---LILRSLTVLEGLALYADPNFKVL 427 (464)
Q Consensus 351 ~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~---~l~r~l~~leg~~~~ldP~~~~~ 427 (464)
++...|+||||.+-.|+.+ ..+|+-++.- ...++..+-+.||.+. .+.+.+...-..|+.-|-.-+..
T Consensus 205 yd~R~D~WsLGITaIElad--G~PPl~DmHP-------mraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~ 275 (953)
T KOG0587|consen 205 YDYRSDLWSLGITAIEMAE--GAPPLCDMHP-------MRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPS 275 (953)
T ss_pred cccccchhhccceeehhcC--CCCCccCcch-------hhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcc
Confidence 3557899999999888887 4566665542 1122333445555542 45555544444444444333332
Q ss_pred Hh---hhHHHHHHhcCCCCHHHHHHHHHHhccCC
Q 012411 428 AA---SYPYFAKRLLTDPNPYLRDALVELLFKDG 458 (464)
Q Consensus 428 ~~---~~p~~~~~l~~~~~p~~r~~~~~~l~~~~ 458 (464)
-. -+||+.+.- ....+|-.+.+.+.++.
T Consensus 276 ~~~ll~hpFi~e~~---~e~qir~~ik~~~~~~r 306 (953)
T KOG0587|consen 276 TEELLKHPFITEQP---NERQVRIQIKDHIDRSR 306 (953)
T ss_pred hhhhccCCcccccc---cHHHHHHHHHHHHhhcc
Confidence 22 466665222 23456666666666554
No 384
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.80 E-value=1.2e-19 Score=180.36 Aligned_cols=186 Identities=19% Similarity=0.255 Sum_probs=116.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||.|++|.||+|....+|+.||||+......... ..+.+..|+
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------~~~~~~~E~---- 60 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-------------------------------LAKRTYREL---- 60 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccccc-------------------------------hhHHHHHHH----
Confidence 789999999999999988999999998754211100 000111111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
..+.++ .+..-+.+...+.......+++|||+. ++|.+..............+..++..++.++|+.|++|+|
T Consensus 61 --~~l~~l----~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~d 133 (328)
T cd07856 61 --KLLKHL----RHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRD 133 (328)
T ss_pred --HHHHhc----CCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 111111 111112222233222345789999994 4676553322222223334557788899999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHc-CCCCCCCCcchHHHHHHHHHHH
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYAL-DFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
++|+||+++.++.++|+|||++......... ..+ ...+..||. +.. ...+.+.|+|++|+.+++++++
T Consensus 134 l~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~---~~~y~aPE~-----~~~~~~~~~~~Dv~slG~il~el~tg 202 (328)
T cd07856 134 LKPSNILINENCDLKICDFGLARIQDPQMTG-YVS---TRYYRAPEI-----MLTWQKYDVEVDIWSAGCIFAEMLEG 202 (328)
T ss_pred CCHHHEeECCCCCEEeCccccccccCCCcCC-Ccc---cccccCcee-----eeccCCcCcHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999998765432111 111 111222332 211 2346789999999999999984
No 385
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.80 E-value=3.3e-19 Score=172.53 Aligned_cols=261 Identities=19% Similarity=0.200 Sum_probs=147.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|++|+||+|....+|+.||||+.+........ ...+ .
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~--~~~~------------------------------------~ 46 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQ--VNNL------------------------------------R 46 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchh--hhHH------------------------------------H
Confidence 5699999999999999888999999987643211100 0000 1
Q ss_pred HHHHHHHHHHHhCCCCCE-EeceeeccC-CCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDV-LVPDIFWDY-TSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~-~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi 289 (464)
|...+.++ .+++++ .+...+.+. .+..++||||++| ++.+.........+. ...+..++..++.++|+.|+
T Consensus 47 e~~~l~~l----~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 47 EIQALRRL----SPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred HHHHHhhc----CCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 11111111 112221 112222221 1567899999986 554443222222333 33445677889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|+|++|.||+++. |.++|+|||++..+...... ........+..||.+ ...+..+.++|+|++|+.++++++
T Consensus 122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~--~~~~~~~~y~aPE~~----~~~~~~~~~~Di~slGv~l~el~~ 194 (282)
T cd07831 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY--TEYISTRWYRAPECL----LTDGYYGPKMDIWAVGCVFFEILS 194 (282)
T ss_pred eecccCHHHEEEcC-CCeEEEecccccccccCCCc--CCCCCCcccCChhHh----hcCCCCCcchhHHHHHHHHHHHHc
Confidence 99999999999999 99999999999876432110 000111223334432 123445778999999999999998
Q ss_pred HhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCC----------CChHHhhhHHHHHHhc
Q 012411 370 DALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPN----------FKVLAASYPYFAKRLL 439 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~----------~~~~~~~~p~~~~~l~ 439 (464)
+ ..++...+..+.+..+.... ...++.. .+.... ........|. .........++.+++
T Consensus 195 ~--~~p~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l- 263 (282)
T cd07831 195 L--FPLFPGTNELDQIAKIHDVL----GTPDAEV---LKKFRK-SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLL- 263 (282)
T ss_pred C--CcCCCCCCHHHHHHHHHHHc----CCCCHHH---HHhhcc-cccccccCcccccccHHHHcccccHHHHHHHHHHh-
Confidence 4 34554444333333332211 1111111 011000 0000000010 123455677777666
Q ss_pred CCCCHHHHHHHHHHhcc
Q 012411 440 TDPNPYLRDALVELLFK 456 (464)
Q Consensus 440 ~~~~p~~r~~~~~~l~~ 456 (464)
.++|..||++.+++.-
T Consensus 264 -~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 264 -AYDPDERITAKQALRH 279 (282)
T ss_pred -ccCcccccCHHHHhhC
Confidence 5779999999988753
No 386
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.80 E-value=3.6e-19 Score=175.44 Aligned_cols=136 Identities=7% Similarity=0.136 Sum_probs=89.5
Q ss_pred CCceEEEeeecCcccCcHHHHH-hcCCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIE-SQGLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~-~~~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
...+++|||++++++.++.... ..+.+. ...+..++..++.|||+.|++|+|+||+||+++.+|.+++.|||.+..+
T Consensus 72 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 72 SELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred CeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceee
Confidence 4568999999999998875432 122333 3345567888999999999999999999999999999999999988765
Q ss_pred CHHHHH-HHHHHHHHHHhcCHHHHHHHHHHc--CCCCCCCCcchHHHHHHHHHHHhccCCCCcC
Q 012411 319 PEEARF-AIIGHVVHMVNRDYEAMARDYYAL--DFLSPDVDVTPIVPALRNFFDDALNSSVSEL 379 (464)
Q Consensus 319 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~ 379 (464)
...... ................++++.... ...+.++|+|++|+.+++++++ ..|+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g--~~pf~~~ 213 (314)
T cd08216 152 IKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANG--HVPFKDM 213 (314)
T ss_pred ccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhC--CCCCCCC
Confidence 322110 000000001111122233333322 2246789999999999999984 3455443
No 387
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.80 E-value=1.9e-19 Score=176.74 Aligned_cols=201 Identities=19% Similarity=0.206 Sum_probs=124.3
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHH-----HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEE-----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~-----~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||+|++|.||+|.+..+|+.||||+....... ....++.+++ ...|++++.+.+.+...
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~----------~l~h~~i~~~~~~~~~~---- 79 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILK----------KLKHPNVVPLIDMAVER---- 79 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHH----------hcCCCCccchhhheecc----
Confidence 6799999999999999888999999988543211 1111222222 23466766665532211
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~ 286 (464)
.. .........++||||+++ ++...........+ ....+..++..++.|+|+
T Consensus 80 --------------------~~-----~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 80 --------------------PD-----KSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred --------------------cc-----cccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00 000112345799999986 34333221111233 334455778889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH----------HHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI----------IGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (464)
.|++|+|+||+||++++++.++|+|||++........... ........+..||.+.. ....+.+.|
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~~D 209 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG----ERRYTTAVD 209 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC----CCccCchhH
Confidence 9999999999999999999999999999886543211000 00011112333443321 123467899
Q ss_pred cchHHHHHHHHHHHhccCCCCcCc
Q 012411 357 VTPIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 357 ~~sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
+|++|+.+++++++ ..++...+
T Consensus 210 v~slG~il~el~~g--~~~~~~~~ 231 (311)
T cd07866 210 IWGIGCVFAEMFTR--RPILQGKS 231 (311)
T ss_pred hHHHHHHHHHHHhC--CCCCCCCC
Confidence 99999999999984 34444444
No 388
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.80 E-value=4.1e-19 Score=171.09 Aligned_cols=121 Identities=12% Similarity=0.133 Sum_probs=82.9
Q ss_pred eEEEeeecCcccCcHHHHHhc-----CCCH--HHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCc
Q 012411 245 VLTMEWVEGVKLNEQVAIESQ-----GLKV--LDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317 (464)
Q Consensus 245 ~LvmE~~~G~~L~~~~~~~~~-----~~~~--~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~ 317 (464)
++++||+.+++|.+....... ..+. ...+..++..++.|+|+.|++|+|+||.||+++.++.++++|||.+..
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~ 162 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKK 162 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccccc
Confidence 688999999998766432211 1222 334557777899999999999999999999999999999999999887
Q ss_pred CCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 318 TPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 318 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+.......... .....+..++++....+..+.++|+||+|+.+++++.
T Consensus 163 ~~~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~ 210 (273)
T cd05074 163 IYSGDYYRQGC----ASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMT 210 (273)
T ss_pred ccCCcceecCC----CccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhh
Confidence 64321100000 0001122223333334445778999999999999987
No 389
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.79 E-value=6.2e-19 Score=168.74 Aligned_cols=189 Identities=13% Similarity=0.072 Sum_probs=120.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHH--HHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIG--LDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~--~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
+.||+|++|.||+|.+..++..+++|+.+........ ........ ...+....|+|+..+.+.+..
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~~l~~l~h~~i~~~~~~~~~-------- 73 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQE----AQLLSKLDHPAIVKFHASFLE-------- 73 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHH----HHHHHhCCCCcHHHHHHHHhc--------
Confidence 6799999999999999867777888876542211100 00011111 111223347777776664331
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH---hcCCCH--HHHHHHHHHHHHHHHHH
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKV--LDLVNTGIQCSLRQLLE 286 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~--~~~~~~~i~~~l~~lh~ 286 (464)
.+..+++|||++|++|.+..... ....+. ...+..++..++.++|+
T Consensus 74 -----------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 124 (260)
T cd08222 74 -----------------------------RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ 124 (260)
T ss_pred -----------------------------CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 14457999999999998764321 122333 23445677889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
.|++|+|++|+||+++ ++.++|+|||.+..+...... . ....+.+..++++.......+.+.|+|++|+.+++
T Consensus 125 ~~i~h~~l~~~nili~-~~~~~l~d~g~~~~~~~~~~~--~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~ 197 (260)
T cd08222 125 RRILHRDLKAKNIFLK-NNLLKIGDFGVSRLLMGSCDL--A----TTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYE 197 (260)
T ss_pred cCccccCCChhheEee-cCCEeecccCceeecCCCccc--c----cCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 9999999999999996 467999999988765332110 0 00111222333333333344678999999999999
Q ss_pred HHHH
Q 012411 367 FFDD 370 (464)
Q Consensus 367 ~~~~ 370 (464)
++.+
T Consensus 198 l~~~ 201 (260)
T cd08222 198 MCCL 201 (260)
T ss_pred HHhC
Confidence 9873
No 390
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=2.3e-20 Score=194.86 Aligned_cols=228 Identities=17% Similarity=0.207 Sum_probs=155.1
Q ss_pred cccccceecEEEEEEEcc-----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY-----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-----~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
+.||.|.||.||+|.... +.+-||||.++.....+...|++ +.++.+..+.|+||+.++..+
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~------REaeLla~l~H~nIVrLlGVC------- 558 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFR------REAELLAELQHPNIVRLLGVC------- 558 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHH------HHHHHHHhccCCCeEEEEEEE-------
Confidence 679999999999999752 23569999987554333222221 111111122233333333322
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc---------C----CCHHH--HH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ---------G----LKVLD--LV 273 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~---------~----~~~~~--~~ 273 (464)
....+.++|.||+..|+|.++...... . +...+ .+
T Consensus 559 ------------------------------~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~i 608 (774)
T KOG1026|consen 559 ------------------------------REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHI 608 (774)
T ss_pred ------------------------------ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHH
Confidence 223678999999999999987553211 1 33333 45
Q ss_pred HHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHH-HHHHHHHhcCHHHHHHHHHHcCCCC
Q 012411 274 NTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAII-GHVVHMVNRDYEAMARDYYALDFLS 352 (464)
Q Consensus 274 ~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~ 352 (464)
..||+.|+.||-++.|+||||-..|+||.++-.|||.|||+++.+-........ .+++.+-+..||.+ --|-.+
T Consensus 609 A~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsI-----ly~kFT 683 (774)
T KOG1026|consen 609 ATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESI-----LYGKFT 683 (774)
T ss_pred HHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHh-----hcCccc
Confidence 688999999999999999999999999999999999999999986444332222 23333334445544 456669
Q ss_pred CCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH-HhhCCCCCChHHHHHHHHH
Q 012411 353 PDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAV-LYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 353 ~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~p~~~~~l~r~l 410 (464)
.++|+||+|..++|+|+ |...|..+.+.+++++-+... +-..|-..|+++-.+++.-
T Consensus 684 teSDVWs~GVvLWEIFs-yG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~C 741 (774)
T KOG1026|consen 684 TESDVWSFGVVLWEIFS-YGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLEC 741 (774)
T ss_pred chhhhhhhhhhhhhhhc-cccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHH
Confidence 99999999999999998 456788888888888766422 1355667788776666554
No 391
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.79 E-value=1.3e-20 Score=190.28 Aligned_cols=201 Identities=14% Similarity=0.111 Sum_probs=144.4
Q ss_pred CCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHH
Q 012411 121 GLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDE 200 (464)
Q Consensus 121 g~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~ 200 (464)
+.+....|-.|+ +.||+|+|-+||+|.+..+|.+||--.++- +.+..+-..+.++...+..+..++|+||+.+++.
T Consensus 34 e~~p~gRy~k~~-evLGrGafKtVYka~De~~giEVAWnqvk~---~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~S 109 (632)
T KOG0584|consen 34 EKDPTGRYLKFD-EVLGRGAFKTVYKAFDEEEGIEVAWNQVKI---RDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDS 109 (632)
T ss_pred ccCCCCceeehh-hhcccccceeeeeccccccchhhHHHHHhH---HHhhcChHHHHHHHHHHHHHccCCCCceeeeeeh
Confidence 456677788887 679999999999999998998887543321 1111222223333333333334557777666664
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-HhcCCCHHHHHHHHHHH
Q 012411 201 FASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQC 279 (464)
Q Consensus 201 ~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~ 279 (464)
+... ......+|+|.+.+|+|..+... +...........+||+.
T Consensus 110 W~d~-----------------------------------~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILk 154 (632)
T KOG0584|consen 110 WVDT-----------------------------------DNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILK 154 (632)
T ss_pred eecC-----------------------------------CCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 4322 01234699999999999988543 22333444556788999
Q ss_pred HHHHHHHCC--cccCCCCCcceEEc-cCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCC
Q 012411 280 SLRQLLEYG--YFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVD 356 (464)
Q Consensus 280 ~l~~lh~~g--i~H~Dlkp~Nili~-~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D 356 (464)
+|.|||++. |+|||||..||+|+ ..|.|||.|.|+|..+....... +-+.||-||+++|+-+| ...+|
T Consensus 155 GL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks--------vIGTPEFMAPEmYEE~Y-nE~VD 225 (632)
T KOG0584|consen 155 GLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS--------VIGTPEFMAPEMYEENY-NELVD 225 (632)
T ss_pred HhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce--------eccCccccChHHHhhhc-chhhh
Confidence 999999874 99999999999998 56999999999998765543332 34569999999998665 88999
Q ss_pred cchHHHHHHHHHH
Q 012411 357 VTPIVPALRNFFD 369 (464)
Q Consensus 357 ~~sl~~~l~~~~~ 369 (464)
+++||.+|.||++
T Consensus 226 VYaFGMCmLEMvT 238 (632)
T KOG0584|consen 226 VYAFGMCMLEMVT 238 (632)
T ss_pred hhhhhHHHHHHHh
Confidence 9999999999998
No 392
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.79 E-value=1.8e-20 Score=175.44 Aligned_cols=190 Identities=18% Similarity=0.310 Sum_probs=130.3
Q ss_pred ccCCcccccceecEEEEEEEccCCcEEEEEEecCChH-----HHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHH
Q 012411 130 SISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIE-----EAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASR 204 (464)
Q Consensus 130 ~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~-----~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 204 (464)
+.+-.|+|.|.- -|..|-+...+++||+|..-.... ++...++.++. ...|.|++.+.+.|.-+
T Consensus 19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~----------~v~~~nii~l~n~ftP~ 87 (369)
T KOG0665|consen 19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMK----------CVNHKNIISLLNVFTPQ 87 (369)
T ss_pred eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhh----------hhcccceeeeeeccCcc
Confidence 344588999887 677888888899999996532111 11112222222 23466666665544321
Q ss_pred HHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 012411 205 VYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQL 284 (464)
Q Consensus 205 ~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 284 (464)
++.+.| ...|+|||++++ +|.+.... +.+-.....+..|+.++++++
T Consensus 88 -----------~~l~~~--------------------~e~y~v~e~m~~-nl~~vi~~-elDH~tis~i~yq~~~~ik~l 134 (369)
T KOG0665|consen 88 -----------KTLEEF--------------------QEVYLVMELMDA-NLCQVILM-ELDHETISYILYQMLCGIKHL 134 (369)
T ss_pred -----------ccHHHH--------------------HhHHHHHHhhhh-HHHHHHHH-hcchHHHHHHHHHHHHHHHHH
Confidence 122222 334699999987 77776553 333344556678899999999
Q ss_pred HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHH
Q 012411 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPAL 364 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l 364 (464)
|+.||+|||+||+||++..++.+|++|||+++.-....+ ++..+....++.|+.+ ..+| ..+.+|+||+||++
T Consensus 135 hs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~--mtpyVvtRyyrapevi----l~~~-~ke~vdiwSvGci~ 207 (369)
T KOG0665|consen 135 HSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFM--MTPYVVTRYYRAPEVI----LGMG-YKENVDIWSVGCIM 207 (369)
T ss_pred HhcceeecccCcccceecchhheeeccchhhcccCcccc--cCchhheeeccCchhe----eccC-CcccchhhhhhhHH
Confidence 999999999999999999999999999999987655532 2233444556666654 3455 58899999999999
Q ss_pred HHHHHH
Q 012411 365 RNFFDD 370 (464)
Q Consensus 365 ~~~~~~ 370 (464)
.|++.+
T Consensus 208 gEli~~ 213 (369)
T KOG0665|consen 208 GELILG 213 (369)
T ss_pred HHHhhc
Confidence 999974
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.79 E-value=5.6e-19 Score=183.02 Aligned_cols=128 Identities=20% Similarity=0.246 Sum_probs=82.4
Q ss_pred CCceEEEeeecCcccCcHHHHHhc------------C-------------CCHHHHHHHHHHHHHHHHHHCCcccCCCCC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQ------------G-------------LKVLDLVNTGIQCSLRQLLEYGYFHADPHP 296 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~------------~-------------~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp 296 (464)
...+|||||+++++|.++...... + .+....+..++..++.|+|+.|++|||+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 456899999999999876432110 0 112233456677899999999999999999
Q ss_pred cceEEccCCcEEEEecCCCCcCCHHHHH-HHHHHHHHHHhcCHHHHHH------------------HHHHcCCCCCCCCc
Q 012411 297 GNLLATPEGKLAFLDFGMMSETPEEARF-AIIGHVVHMVNRDYEAMAR------------------DYYALDFLSPDVDV 357 (464)
Q Consensus 297 ~Nili~~~g~i~l~DFGl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~------------------~~~~~g~~~~~~D~ 357 (464)
+|||++.++.++|+|||++..+...... ...++ ....+..||.+.. .....| ....+|+
T Consensus 338 ~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~-~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg-~~~~~Dv 415 (507)
T PLN03224 338 ENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGM-LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYG-RPDLFDS 415 (507)
T ss_pred HhEEECCCCcEEEEeCcCccccccCCccCccccC-CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcC-CCCccch
Confidence 9999999999999999998765332110 00110 0112223333210 001111 1345799
Q ss_pred chHHHHHHHHHHHh
Q 012411 358 TPIVPALRNFFDDA 371 (464)
Q Consensus 358 ~sl~~~l~~~~~~~ 371 (464)
|++|+.+++|+.+.
T Consensus 416 wSlGvil~em~~~~ 429 (507)
T PLN03224 416 YTAGVLLMQMCVPE 429 (507)
T ss_pred hhHHHHHHHHHhCC
Confidence 99999999999743
No 394
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.79 E-value=3e-18 Score=156.10 Aligned_cols=166 Identities=23% Similarity=0.228 Sum_probs=107.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|++|+||+|.+. +|++||||+.+++.......+..++ ...+....+.+...+...+. ..
T Consensus 3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---------~~ 66 (187)
T cd05119 3 GPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRT------GDYRFGRKKSNWRYLSRLWA---------EK 66 (187)
T ss_pred cccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhH------HHHHhccCCcchhhhhhHHH---------HH
Confidence 57999999999999987 8999999999876433221111110 01111122344333332221 23
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCC-CHHHHHHHHHHHHHHHHHH-CCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGL-KVLDLVNTGIQCSLRQLLE-YGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~-~~~~~~~~~i~~~l~~lh~-~gi~H 291 (464)
|..++.++... .+.+|+++.. ...++||||++|+.+.... ...... .....+..++..++.++|. .|++|
T Consensus 67 e~~~l~~l~~~-----~~~~~~~~~~--~~~~lv~e~~~g~~~~~~~-l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH 138 (187)
T cd05119 67 EFRNLKRLYEA-----GVPVPKPIDL--NRHVLVMEFIGGDGIPAPR-LKDVRLLEDPEELYDQILELMRKLYREAGLVH 138 (187)
T ss_pred HHHHHHHHHHc-----CCCCCceEec--CCCEEEEEEeCCCCccChh-hhhhhhcccHHHHHHHHHHHHHHHhhccCcCc
Confidence 45555555442 3456766643 4579999999995543211 111111 3344556677789999999 99999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARF 324 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~ 324 (464)
+|+||+||+++ ++.++++|||.+.........
T Consensus 139 ~Dl~p~Nili~-~~~~~liDfg~a~~~~~~~~~ 170 (187)
T cd05119 139 GDLSEYNILVD-DGKVYIIDVPQAVEIDHPNAE 170 (187)
T ss_pred CCCChhhEEEE-CCcEEEEECcccccccCcchH
Confidence 99999999999 999999999999887665433
No 395
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.79 E-value=9.1e-19 Score=169.57 Aligned_cols=198 Identities=13% Similarity=0.077 Sum_probs=121.8
Q ss_pred cccccceecEEEEEEEcc----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLKY----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~----~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||+|+||.||+|.+.. ++..|++|........... +
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~--------------------------------~------ 53 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQV--------------------------------T------ 53 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHH--------------------------------H------
Confidence 679999999999999873 2688999987644221100 0
Q ss_pred cHHHHHHHHHHHHHHhCCCCCE-EeceeeccCCCCceEEEeeecCcccCcHHHHHh-------cCCCHH--HHHHHHHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDV-LVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-------QGLKVL--DLVNTGIQC 279 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-------~~~~~~--~~~~~~i~~ 279 (464)
.+..|...+.++ +++++ .+.....+.....++++||+++++|.+...... ..+... ..+..++..
T Consensus 54 ~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~ 128 (280)
T cd05043 54 LLLQESCLLYGL-----SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC 128 (280)
T ss_pred HHHHHHHHHHhC-----CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHH
Confidence 011122111111 11221 111111222356789999999999988754321 123333 334567778
Q ss_pred HHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcc
Q 012411 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAI-IGHVVHMVNRDYEAMARDYYALDFLSPDVDVT 358 (464)
Q Consensus 280 ~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~ 358 (464)
++.|+|+.|++|+|++|+||+++.++.++|+|||+++.+.+...... ........+..|| .......+.++|+|
T Consensus 129 ~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE-----~~~~~~~~~~~Di~ 203 (280)
T cd05043 129 GMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALE-----SLVNKEYSSASDVW 203 (280)
T ss_pred HHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHH-----HHhcCCCCchhhHH
Confidence 99999999999999999999999999999999999986633211000 0000011222343 33334457889999
Q ss_pred hHHHHHHHHHHHhccCCCCcCc
Q 012411 359 PIVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 359 sl~~~l~~~~~~~~~~~~~~~~ 380 (464)
++|+.++++++. ...|+...+
T Consensus 204 slG~~l~el~~~-g~~p~~~~~ 224 (280)
T cd05043 204 SFGVLLWELMTL-GQTPYVEID 224 (280)
T ss_pred HhHHHHHHHhcC-CCCCcCcCC
Confidence 999999999872 234444443
No 396
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.78 E-value=1.3e-18 Score=163.38 Aligned_cols=180 Identities=23% Similarity=0.267 Sum_probs=118.2
Q ss_pred eecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 012411 140 SLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNAR 219 (464)
Q Consensus 140 s~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~ 219 (464)
+||+||+|....+|+.||+|+......... ...+...+..+....|+++..+.+.+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------~~~~~~e~~~~~~l~~~~i~~~~~~~~----------------- 57 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK------RERILREISILKKLKHPNIVRLYDVFE----------------- 57 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH------HHHHHHHHHHHHhCCCCcHHHHHhhee-----------------
Confidence 589999999987799999999976533211 011111111111223555544443211
Q ss_pred HHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCc
Q 012411 220 RFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPG 297 (464)
Q Consensus 220 ~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~ 297 (464)
.....+++|||+++++|.+...... ..+.. ..+..++..++.++|+.|++|+|++|+
T Consensus 58 --------------------~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ 116 (244)
T smart00220 58 --------------------DEDKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNGIIHRDLKPE 116 (244)
T ss_pred --------------------eCCEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHH
Confidence 1145689999999999987744322 13333 334456667999999999999999999
Q ss_pred ceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 298 NLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 298 Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
||+++.++.++++|||.+......... ......+..++++....+..+++.|+|++|+.+++++++
T Consensus 117 ni~~~~~~~~~l~d~~~~~~~~~~~~~-------~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 117 NILLDEDGHVKLADFGLARQLDPGGLL-------TTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred HeEECCCCcEEEccccceeeecccccc-------ccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999999999999887654200 001112222333333345567799999999999999984
No 397
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=8.3e-19 Score=174.50 Aligned_cols=140 Identities=21% Similarity=0.233 Sum_probs=95.8
Q ss_pred cccccceecEEEEEEEcc-CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKY-SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.||+|+||+||+|.++. +|+.||||+..+..... .. +..... +.
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~---------------------------~~~~~~------~~ 69 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SK---------------------------PLARHL------AA 69 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-cc---------------------------HHHHHH------HH
Confidence 789999999999999875 67888999875321100 00 000111 33
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
+|++.+.++.+ +++ +|.++.. +..+||||||+|++|... ... .. ..+..++..++.++|+.|++||
T Consensus 70 ~E~~iL~~L~h-----~~i-v~~l~~~--~~~~LVmE~~~G~~L~~~---~~~--~~-~~~~~~i~~aL~~lH~~gIiHr 135 (365)
T PRK09188 70 REIRALKTVRG-----IGV-VPQLLAT--GKDGLVRGWTEGVPLHLA---RPH--GD-PAWFRSAHRALRDLHRAGITHN 135 (365)
T ss_pred HHHHHHHhccC-----CCC-CcEEEEc--CCcEEEEEccCCCCHHHh---Ccc--ch-HHHHHHHHHHHHHHHHCCCeeC
Confidence 44444444421 222 3455542 567999999999988632 111 11 2345667789999999999999
Q ss_pred CC-CCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 293 DP-HPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 293 Dl-kp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
|+ ||+|||++.+++++|+|||+++.+...
T Consensus 136 DL~KP~NILv~~~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 136 DLAKPQNWLMGPDGEAAVIDFQLASVFRRR 165 (365)
T ss_pred CCCCcceEEEcCCCCEEEEECccceecccC
Confidence 99 999999999999999999999976543
No 398
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.78 E-value=1e-19 Score=184.91 Aligned_cols=207 Identities=17% Similarity=0.140 Sum_probs=142.2
Q ss_pred cccccceecEEEEEEEcc-CC--cEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLKY-SG--QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~-~g--~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+.||+|+||.|++|.++. +| -.||||+++++....+ --|
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~--------------------------------------mdd 157 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAI--------------------------------------MDD 157 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchh--------------------------------------HHH
Confidence 569999999999999864 33 3699999987743321 114
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC-C--CHHHHHHHHHHHHHHHHHHC
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-L--KVLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-~--~~~~~~~~~i~~~l~~lh~~ 287 (464)
|++|+..+-++.+- .-|..-.|+ +.....+|||.+++|+|.+.......+ + ...-.+..||..++.||-.+
T Consensus 158 flrEas~M~~L~H~----hliRLyGvV--l~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk 231 (1039)
T KOG0199|consen 158 FLREASHMLKLQHP----HLIRLYGVV--LDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK 231 (1039)
T ss_pred HHHHHHHHHhccCc----ceeEEeeee--ccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh
Confidence 66677766666432 111211122 235667999999999998864432222 2 23334567888899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
++||||+-..|+++-....|||+|||+++.+....... .+..-..-.+.+++++.+..+..+.+.|+|.+|.++|||
T Consensus 232 rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y---vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEM 308 (1039)
T KOG0199|consen 232 RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY---VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEM 308 (1039)
T ss_pred hhhhhhhhhhhheecccceeeeecccceeccCCCCcce---EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhh
Confidence 99999999999999988899999999999986553210 000001112345666777788889999999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHH
Q 012411 368 FDDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l 388 (464)
|+ |.+.|+.+.+-..++..+
T Consensus 309 Ft-yGEePW~G~~g~qIL~~i 328 (1039)
T KOG0199|consen 309 FT-YGEEPWVGCRGIQILKNI 328 (1039)
T ss_pred hc-cCCCCCCCCCHHHHHHhc
Confidence 98 456666665544444433
No 399
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.77 E-value=5.8e-19 Score=177.20 Aligned_cols=227 Identities=17% Similarity=0.133 Sum_probs=159.8
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
...+|-|-+|.||.|.++.-.-.||||.++.+... +..+...+..+..+.|+|+++++..+...
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe--------veEFLkEAAvMKeikHpNLVqLLGVCT~E-------- 335 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------VEEFLKEAAVMKEIKHPNLVQLLGVCTHE-------- 335 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchh--------HHHHHHHHHHHHhhcCccHHHHhhhhccC--------
Confidence 46799999999999999978889999998754221 12222222222334578888777765421
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhc-CCCH--HHHHHHHHHHHHHHHHHCCc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQ-GLKV--LDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~-~~~~--~~~~~~~i~~~l~~lh~~gi 289 (464)
-..||++||+..|.|.++...... -... ...+..||.+++.||..++|
T Consensus 336 -----------------------------pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknF 386 (1157)
T KOG4278|consen 336 -----------------------------PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNF 386 (1157)
T ss_pred -----------------------------CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhh
Confidence 344699999999999988543221 1222 22345778889999999999
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
||||+-..|+|+.++.-+|+.|||+++.+..+...+-+|.-.-+-+..||.++ ....+-+.|+|+||..+||+.+
T Consensus 387 IHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLA-----yNtFSiKSDVWAFGVLLWEIAT 461 (1157)
T KOG4278|consen 387 IHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA-----YNTFSIKSDVWAFGVLLWEIAT 461 (1157)
T ss_pred hhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCccccc-----ccccccchhhHHHHHHHHHHHh
Confidence 99999999999999999999999999998877654444332223334455443 3344778999999999999987
Q ss_pred HhccCCCCcCcHHHHHHHHHHHH-hhCCCCCChHHHHHHHHH
Q 012411 370 DALNSSVSELNFKTIVDGLGAVL-YQYPFNVPAYYALILRSL 410 (464)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~p~~~~~l~r~l 410 (464)
|.-.|+.+++...+..-+.+.. .+-|-++||..-.++|+.
T Consensus 462 -YGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraC 502 (1157)
T KOG4278|consen 462 -YGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRAC 502 (1157)
T ss_pred -cCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHH
Confidence 4446777777666554443322 245677899888888875
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.77 E-value=4.5e-18 Score=155.49 Aligned_cols=183 Identities=20% Similarity=0.267 Sum_probs=118.0
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||+|++|+||++....+|++++||+..+..... ..+. +.+|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--------------------------------~~~~------~~~e~ 42 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--------------------------------LLEE------LLREI 42 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--------------------------------HHHH------HHHHH
Confidence 689999999999997669999999998663321 0011 12222
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcccCC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
..+..+.+ +.+.-+.-+.......+++|||++|++|.+.........+.. ..+..++..++.++|+.|++|+|
T Consensus 43 ~~~~~l~~-----~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~d 117 (215)
T cd00180 43 EILKKLNH-----PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117 (215)
T ss_pred HHHHhcCC-----CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 22222211 222222223333357799999999999988754331233433 34456677799999999999999
Q ss_pred CCCcceEEcc-CCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC-CCCCCCCcchHHHHHHHH
Q 012411 294 PHPGNLLATP-EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD-FLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 294 lkp~Nili~~-~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~D~~sl~~~l~~~ 367 (464)
++|+||++++ +++++|+|||.+......... . .........+.++....+ ..+.+.|+|++|+.++++
T Consensus 118 l~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~-~-----~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 118 LKPENILLDSDNGKVKLADFGLSKLLTSDKSL-L-----KTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred CCHhhEEEeCCCCcEEEecCCceEEccCCcch-h-----hcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 9999999998 899999999999876544210 0 001111222222232232 446788999999888776
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.77 E-value=2.3e-19 Score=181.80 Aligned_cols=252 Identities=21% Similarity=0.274 Sum_probs=160.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..+|+|++|.||+|+++.+|+..|||+++-.....+ ..++. ..-....-.|+|++.++..+-..
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~----~~iqq---ei~~~~dc~h~nivay~gsylr~--------- 84 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDF----SGIQQ---EIGMLRDCRHPNIVAYFGSYLRR--------- 84 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCccc----ccccc---ceeeeecCCCcChHHHHhhhhhh---------
Confidence 579999999999999999999999999874322221 11110 00111233578888777754332
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H 291 (464)
...|++||||.||+|.+..... ..+... ..+.+....+++|+|+.|-+|
T Consensus 85 ----------------------------dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~gk~h 135 (829)
T KOG0576|consen 85 ----------------------------DKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQGKIH 135 (829)
T ss_pred ----------------------------cCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcCCccc
Confidence 5678999999999999864321 122222 233344555999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHH--HHHHHHHHHHHHHhcCHHHHHHHHH---HcCCCCCCCCcchHHHHHHH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEE--ARFAIIGHVVHMVNRDYEAMARDYY---ALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~D~~sl~~~l~~ 366 (464)
||+|-+||++++.|.+++.|||.++++... .|..+.|+ |.+++.++- .-|.+....|+|++|....|
T Consensus 136 RdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGt--------pywmapEvaaverkggynqlcdiwa~gitAie 207 (829)
T KOG0576|consen 136 RDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGT--------PYWMAPEVAAVERKGGYNQLCDIWALGITAIE 207 (829)
T ss_pred ccccccceeecccCceeecccCchhhhhhhhhhhhcccCC--------ccccchhHHHHHhcccccccccccccccchhh
Confidence 999999999999999999999999988654 44555555 333333332 33455788999999977666
Q ss_pred HHHHhccCCCCcCc-HHHHHHHHHHHHh-----hCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHHh---hhHHHHHH
Q 012411 367 FFDDALNSSVSELN-FKTIVDGLGAVLY-----QYPFNVPAYYALILRSLTVLEGLALYADPNFKVLAA---SYPYFAKR 437 (464)
Q Consensus 367 ~~~~~~~~~~~~~~-~~~~~~~l~~~~~-----~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~~---~~p~~~~~ 437 (464)
+-+ +..|.-+.. ++.+. -+.+-.+ +.+.++.+.|-.++|.. +.-+|.-+.+++ .+|++.+.
T Consensus 208 l~e--Lqpplfdlhpmr~l~-LmTkS~~qpp~lkDk~kws~~fh~fvK~a-------ltknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 208 LGE--LQPPLFDLHPMRALF-LMTKSGFQPPTLKDKTKWSEFFHNFVKGA-------LTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hhh--cCCcccccchHHHHH-HhhccCCCCCcccCCccchHHHHHHHHHH-------hcCCCccCCChhhheeceeeccc
Confidence 555 333333322 22211 1111111 22344556666666665 556777777665 56665433
Q ss_pred hcCCCCHHHHHHHHHHhc
Q 012411 438 LLTDPNPYLRDALVELLF 455 (464)
Q Consensus 438 l~~~~~p~~r~~~~~~l~ 455 (464)
.-|....|+|.
T Consensus 278 -------l~~rl~~eLLd 288 (829)
T KOG0576|consen 278 -------LSRRLAIELLD 288 (829)
T ss_pred -------hhhHHHHHHHH
Confidence 33444555555
No 402
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.76 E-value=1.7e-18 Score=169.71 Aligned_cols=194 Identities=17% Similarity=0.123 Sum_probs=127.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|+|.||.||+|.+ +++.||||+....-.+....+-++.... ...|.||.+++..=+
T Consensus 216 eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~lp--------~m~h~nIl~Fi~~ek----------- 274 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSLP--------GMKHENILQFIGAEK----------- 274 (534)
T ss_pred HHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhcc--------CccchhHHHhhchhc-----------
Confidence 6699999999999999 5799999999866555544443332211 233555555443211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHH-------
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLE------- 286 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~------- 286 (464)
.... ...+.+||+||-+.|+|.++...+-..+...-.+..-+..||+|||+
T Consensus 275 -------------r~t~---------~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~ 332 (534)
T KOG3653|consen 275 -------------RGTA---------DRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDH 332 (534)
T ss_pred -------------cCCc---------cccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCC
Confidence 1000 11356899999999999999665444433334444556779999996
Q ss_pred --CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcC--CCCCCCCcchHH
Q 012411 287 --YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALD--FLSPDVDVTPIV 361 (464)
Q Consensus 287 --~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~D~~sl~ 361 (464)
.+|.|||+|..||||..|++.+|+|||++..+.+... ....+-+.+.-+..||.+-..+- +- -.-..+|++++|
T Consensus 333 ~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgain-l~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 333 HKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAIN-LQDRDAFKRIDVYAMG 411 (534)
T ss_pred CCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcc-cccHHHHHHHHHHHHH
Confidence 4699999999999999999999999999998765421 11222333333334554432211 10 001247999999
Q ss_pred HHHHHHHHHh
Q 012411 362 PALRNFFDDA 371 (464)
Q Consensus 362 ~~l~~~~~~~ 371 (464)
-.++|+++..
T Consensus 412 LVLWEi~SRC 421 (534)
T KOG3653|consen 412 LVLWEIASRC 421 (534)
T ss_pred HHHHHHHhhc
Confidence 9999999754
No 403
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=5.1e-17 Score=150.91 Aligned_cols=144 Identities=21% Similarity=0.332 Sum_probs=104.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|++|.||+|.. +|..|+||+..+.....-..+ .. .....+.+
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~--------------------------~~-----~~~~~~~~ 48 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELD--------------------------ER-----IRRERTRR 48 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHH--------------------------HH-----HHHHHHHH
Confidence 5799999999999987 788999998775422110000 00 01112344
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|+.++..+.+ +.+.+|.++....+..+++|||++|++|.+.... ... ....+..++..++.++|..|++|+|
T Consensus 49 E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~-~~~~i~~~i~~~l~~lH~~~i~H~D 120 (211)
T PRK14879 49 EARIMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGM-EELELSREIGRLVGKLHSAGIIHGD 120 (211)
T ss_pred HHHHHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccH-HHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5555555543 4577888887667788999999999999877432 111 3334456677799999999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCC
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
+||+|||++ ++.++++|||+++...
T Consensus 121 l~p~Nil~~-~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 121 LTTSNMILS-GGKIYLIDFGLAEFSK 145 (211)
T ss_pred CCcccEEEE-CCCEEEEECCcccCCC
Confidence 999999998 8899999999988754
No 404
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.2e-19 Score=174.15 Aligned_cols=206 Identities=17% Similarity=0.210 Sum_probs=126.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..+|.|+|+.||+|.+....+-||||+-.-+.. ...+ .. +.+.+...+|-+...
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~--WrdE-----------------KK-------eNYhKHAcREyrIHK 522 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKN--WRDE-----------------KK-------ENYHKHACREYRIHK 522 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhccc--hhhH-----------------hh-------hhHHHHHHHHHhhhh
Confidence 459999999999999986788999998653210 0000 00 001111111111111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccC---CCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHC--
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDY---TSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEY-- 287 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~-- 287 (464)
| + ..-.+.+.|..+ +...|-|+|||+|.+|+-+.... ......++.+..+|..+|.||.+.
T Consensus 523 e----------L---DHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikp 589 (775)
T KOG1151|consen 523 E----------L---DHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKP 589 (775)
T ss_pred c----------c---CcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence 1 1 122233444433 34568999999999998775533 334556677888999999999975
Q ss_pred CcccCCCCCcceEEcc---CCcEEEEecCCCCcCCHHHHHHHHHHHHH-HHhcCHHHHHHHHHHcC----CCCCCCCcch
Q 012411 288 GYFHADPHPGNLLATP---EGKLAFLDFGMMSETPEEARFAIIGHVVH-MVNRDYEAMARDYYALD----FLSPDVDVTP 359 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~---~g~i~l~DFGl~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g----~~~~~~D~~s 359 (464)
.|||-|+||+|||+.. -|.|||.|||+++.++.+......|+-++ -..+.+-++.++.+-.| -++.++|+||
T Consensus 590 PIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWS 669 (775)
T KOG1151|consen 590 PIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWS 669 (775)
T ss_pred CeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEe
Confidence 5999999999999953 47799999999999876543322211110 11122222222222233 3467899999
Q ss_pred HHHHHHHHHHHhccCCCCcCc
Q 012411 360 IVPALRNFFDDALNSSVSELN 380 (464)
Q Consensus 360 l~~~l~~~~~~~~~~~~~~~~ 380 (464)
+|.+++..+- ...|++...
T Consensus 670 vGVIFyQClY--GrKPFGhnq 688 (775)
T KOG1151|consen 670 VGVIFYQCLY--GRKPFGHNQ 688 (775)
T ss_pred eehhhhhhhc--cCCCCCCch
Confidence 9999887664 456666543
No 405
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.76 E-value=7.9e-18 Score=174.02 Aligned_cols=208 Identities=16% Similarity=0.119 Sum_probs=152.4
Q ss_pred CcccccceecEEEEEEEccCCc----EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQ----IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~----~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
.+.||+|+||.||+|.+-..|+ +||||+....... ..-.++|.... .+..+.|+|+..++....
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~--~~s~e~LdeAl----~masldHpnl~RLLgvc~------ 768 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP--KASIELLDEAL----RMASLDHPNLLRLLGVCM------ 768 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCc--hhhHHHHHHHH----HHhcCCCchHHHHhhhcc------
Confidence 3789999999999999865564 7999998643221 12223333322 223456788877776432
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHH--HHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLV--NTGIQCSLRQLLE 286 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~--~~~i~~~l~~lh~ 286 (464)
.+..-||++|+++|.|.|+.+.++..+-...++ ..||..++.|||+
T Consensus 769 --------------------------------~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~ 816 (1177)
T KOG1025|consen 769 --------------------------------LSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEE 816 (1177)
T ss_pred --------------------------------cchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh
Confidence 133459999999999999877666555554444 4678889999999
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~ 366 (464)
++++||||-..|+||..-..+|+.|||+++.+.++..+-.+ ......+.+++-+.......+.+.|+|++|..+||
T Consensus 817 qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~----~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWE 892 (1177)
T KOG1025|consen 817 QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA----PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWE 892 (1177)
T ss_pred cchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccc----cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHH
Confidence 99999999999999999999999999999998776543211 11223456677677777888999999999999999
Q ss_pred HHHHhccCCCCcCcHHHHHHHHH
Q 012411 367 FFDDALNSSVSELNFKTIVDGLG 389 (464)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~l~ 389 (464)
+++ +...|...++..++.+.+.
T Consensus 893 lmT-FGa~Py~gi~~~eI~dlle 914 (1177)
T KOG1025|consen 893 LMT-FGAKPYDGIPAEEIPDLLE 914 (1177)
T ss_pred HHh-cCCCccCCCCHHHhhHHHh
Confidence 998 4567788888777665444
No 406
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.75 E-value=6e-19 Score=199.70 Aligned_cols=178 Identities=15% Similarity=0.136 Sum_probs=119.7
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.+.||+|+||.||+|++..+|..||||......... ..+++. +....|+|++++++.
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~----------l~~l~HpnIv~~~~~------------ 751 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP-SSEIAD----------MGKLQHPNIVKLIGL------------ 751 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc-HHHHHH----------HhhCCCCCcceEEEE------------
Confidence 468999999999999997799999999876331110 011111 112235554443321
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHH---HCCc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL---EYGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~gi 289 (464)
.......++||||++|++|.++. ..........+..++..|++|+| ..++
T Consensus 752 -------------------------~~~~~~~~lv~Ey~~~g~L~~~l--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i 804 (968)
T PLN00113 752 -------------------------CRSEKGAYLIHEYIEGKNLSEVL--RNLSWERRRKIAIGIAKALRFLHCRCSPAV 804 (968)
T ss_pred -------------------------EEcCCCCEEEEeCCCCCcHHHHH--hcCCHHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 12234568999999999998874 33444445566678888999999 6799
Q ss_pred ccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHH
Q 012411 290 FHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~ 369 (464)
+|||+||+||+++.++..++. ||..+....... .. +.+.+++++....+..+.++|+|++|+.++|+++
T Consensus 805 iH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~--~~--------~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t 873 (968)
T PLN00113 805 VVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTK--CF--------ISSAYVAPETRETKDITEKSDIYGFGLILIELLT 873 (968)
T ss_pred ecCCCCHHhEEECCCCceEEE-eccccccccCCC--cc--------ccccccCcccccCCCCCcccchhhHHHHHHHHHh
Confidence 999999999999988876664 665544322111 01 1233344444444556889999999999999999
Q ss_pred Hh
Q 012411 370 DA 371 (464)
Q Consensus 370 ~~ 371 (464)
+.
T Consensus 874 g~ 875 (968)
T PLN00113 874 GK 875 (968)
T ss_pred CC
Confidence 54
No 407
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.75 E-value=1e-17 Score=151.36 Aligned_cols=137 Identities=22% Similarity=0.343 Sum_probs=101.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+||||.+|.|..-.+|++||||+-+.... ||.+ ..
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~------------------------hpqL-----------------~y 59 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAK------------------------HPQL-----------------LY 59 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCC------------------------Ccch-----------------hH
Confidence 789999999999999988999999999764422 3221 11
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCC--ceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSG--KVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~--~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
|+ ++...++ ..+-+|.+.+..+.. .++|||.+ |.+|.++-......++.. ..+..|+..-++|+|.+++
T Consensus 60 Es----kvY~iL~--~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~f 132 (341)
T KOG1163|consen 60 ES----KVYRILQ--GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNF 132 (341)
T ss_pred HH----HHHHHhc--cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhcc
Confidence 11 2223332 345567776665544 58999998 889998766555555444 3445677778999999999
Q ss_pred ccCCCCCcceEEc---cCCcEEEEecCCCCcC
Q 012411 290 FHADPHPGNLLAT---PEGKLAFLDFGMMSET 318 (464)
Q Consensus 290 ~H~Dlkp~Nili~---~~g~i~l~DFGl~~~l 318 (464)
+||||||.|+|.. ...++.+||||+++..
T Consensus 133 iHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 133 IHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ccccCCccceeeccccccceEEEEeccchhhh
Confidence 9999999999986 4467999999999865
No 408
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.74 E-value=1.2e-18 Score=175.21 Aligned_cols=224 Identities=17% Similarity=0.149 Sum_probs=148.5
Q ss_pred cccccceecEEEEEEEcc--CCc--EEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAAASLGQVYKAQLKY--SGQ--IVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~--~g~--~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
+.||.|-||.||+|.... .|+ -||||..+.+-... .- ..+......+.++.|++|++++..+.
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d--~t----ekflqEa~iMrnfdHphIikLIGv~~------- 461 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD--DT----EKFLQEASIMRNFDHPHIIKLIGVCV------- 461 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChh--hH----HHHHHHHHHHHhCCCcchhheeeeee-------
Confidence 569999999999999852 233 58999876431110 00 01111111222334555555554322
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHC
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~ 287 (464)
..+.|||||.++-|.|..+...++..++. ..++..|+..++.|||+.
T Consensus 462 -------------------------------e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk 510 (974)
T KOG4257|consen 462 -------------------------------EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK 510 (974)
T ss_pred -------------------------------ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh
Confidence 25679999999999999987766655554 345678888899999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNF 367 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~ 367 (464)
.|+||||-..|||+....-+||.|||+++.+..+....-... .-...+++++-...-..+...|+|-||.+|||+
T Consensus 511 rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~-----kLPIKWmaPESINfRrFTtASDVWMFgVCmWEI 585 (974)
T KOG4257|consen 511 RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRG-----KLPIKWMAPESINFRRFTTASDVWMFGVCMWEI 585 (974)
T ss_pred chhhhhhhhhheeecCcceeeecccchhhhccccchhhcccc-----ccceeecCccccchhcccchhhHHHHHHHHHHH
Confidence 999999999999999999999999999999877643211111 112334444444555568889999999999999
Q ss_pred HHHhccCCCCcCcHHHHHHHHHHHHh-hCCCCCChHHHHHH
Q 012411 368 FDDALNSSVSELNFKTIVDGLGAVLY-QYPFNVPAYYALIL 407 (464)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~p~~~~~l~ 407 (464)
+.- +-.|+.+...++++-.+.+.-+ ..|...||.+-.++
T Consensus 586 l~l-GvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 586 LSL-GVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred HHh-cCCccccccccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 972 4456766655555544433222 34556677655443
No 409
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.74 E-value=9.1e-19 Score=174.89 Aligned_cols=185 Identities=17% Similarity=0.255 Sum_probs=127.5
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCCh--HHH---------HHHHHHHHHHHHHHHHhchhcccCCHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGI--EEA---------IGLDFYLIRGVGFLINKYVDIITTDVVALIDEF 201 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~--~~~---------~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~ 201 (464)
-+|+|+|+||+|+.|.++.+..+|+||.+.+.. .+. +..++.+|..+. +..|+||.++++
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~-------~~sH~NIlKlLd-- 636 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLN-------KHSHENILKLLD-- 636 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhh-------hcCccchhhhhh--
Confidence 379999999999999999888999999986430 011 112222222221 122455555544
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeee-cCcccCcHHHHH-hcCCCHHHHHHHHHHH
Q 012411 202 ASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWV-EGVKLNEQVAIE-SQGLKVLDLVNTGIQC 279 (464)
Q Consensus 202 ~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~-~G~~L~~~~~~~-~~~~~~~~~~~~~i~~ 279 (464)
.|.++.+. ||+||-- +|.+|.+++..+ ...+.....+..|+..
T Consensus 637 ----------------------fFEddd~y-------------yl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~a 681 (772)
T KOG1152|consen 637 ----------------------FFEDDDYY-------------YLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVA 681 (772)
T ss_pred ----------------------eeecCCee-------------EEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHh
Confidence 44444443 4888853 667777765433 2345677889999999
Q ss_pred HHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcch
Q 012411 280 SLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTP 359 (464)
Q Consensus 280 ~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~s 359 (464)
++++||+.||+|||||-+|+.++.+|-++|+|||.+.......-..+.|++.+. .||.+.. -.|.+.+-|+|+
T Consensus 682 gi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~a---apevl~g----~~y~gk~qdiwa 754 (772)
T KOG1152|consen 682 GIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYA---APEVLGG----EKYLGKPQDIWA 754 (772)
T ss_pred ccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeecccc---chhhhCC----CccCCCcchhhh
Confidence 999999999999999999999999999999999998877655444455543322 2443322 225577889999
Q ss_pred HHHHHHHHH
Q 012411 360 IVPALRNFF 368 (464)
Q Consensus 360 l~~~l~~~~ 368 (464)
+|..+|.++
T Consensus 755 lgillytiv 763 (772)
T KOG1152|consen 755 LGILLYTIV 763 (772)
T ss_pred hhheeeEEE
Confidence 998887554
No 410
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=4.8e-18 Score=165.39 Aligned_cols=189 Identities=17% Similarity=0.197 Sum_probs=129.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+|-||.||+|.++ |+.||||+....-+....++-++.+.+. ++|.||..++..-.
T Consensus 217 e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvm--------LRHENILgFIaaD~----------- 275 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVM--------LRHENILGFIAADN----------- 275 (513)
T ss_pred EEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHH--------hccchhhhhhhccc-----------
Confidence 77999999999999996 9999999998766666666666555543 23666655554210
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHH--HHHHHHHHHHHH-----
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVN--TGIQCSLRQLLE----- 286 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~--~~i~~~l~~lh~----- 286 (464)
.+. ...++.|||++|-+.|+|.|+.. ...++....+. .-+.++|.+||.
T Consensus 276 ------------~~~----------gs~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~LalS~AsGLaHLH~eI~GT 331 (513)
T KOG2052|consen 276 ------------KDN----------GSWTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLALSIASGLAHLHMEIVGT 331 (513)
T ss_pred ------------cCC----------CceEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHHHHHhhhHHHHHHHHhcC
Confidence 011 12378899999999999999844 45566555444 345669999994
Q ss_pred ---CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHH------HHHHHHHHHHhcCHHHHHHHHHHcCCCC-CCCC
Q 012411 287 ---YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARF------AIIGHVVHMVNRDYEAMARDYYALDFLS-PDVD 356 (464)
Q Consensus 287 ---~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~D 356 (464)
-.|.|||+|..||||..+|...|+|+|++...++.... .-+|+-.+|+ ||.+-+.+-.-.+-+ ..+|
T Consensus 332 qgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMA---PEvLdetin~~~Fesyk~AD 408 (513)
T KOG2052|consen 332 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMA---PEVLDETINMKHFESYKRAD 408 (513)
T ss_pred CCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccC---hHHhhhhcChhhhhhhhHHH
Confidence 35999999999999999999999999999875544210 1133333332 444332221000111 2479
Q ss_pred cchHHHHHHHHHHH
Q 012411 357 VTPIVPALRNFFDD 370 (464)
Q Consensus 357 ~~sl~~~l~~~~~~ 370 (464)
+|+||-.++|+...
T Consensus 409 IYafgLVlWEiarR 422 (513)
T KOG2052|consen 409 IYAFGLVLWEIARR 422 (513)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.73 E-value=1.5e-17 Score=154.78 Aligned_cols=196 Identities=19% Similarity=0.200 Sum_probs=123.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||+|++|+||+|.+..+++.+++|......... .. +. +..
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~~-----------------------------~~------~~~ 46 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEK---QR-----------------------------EE------FLR 46 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchH---HH-----------------------------HH------HHH
Confidence 68999999999999998679999999987552220 00 01 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~~lh~~gi~H 291 (464)
|...+.++ +++++.....+.......+++|||++|++|.+.........+. ...+..++..++.++|..|++|
T Consensus 47 e~~~~~~~-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h 121 (225)
T smart00221 47 EIRILKKL-----KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVH 121 (225)
T ss_pred HHHHHHhC-----CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 12222211 1111111111112235678999999999998875432211332 2334456777899999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHh
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
+|++|.||+++.++.++|+|||.+..+.............+..+..|+... .....+.+.|+|++|+.++++++
T Consensus 122 ~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~Dv~~lG~~~~~l~~-- 195 (225)
T smart00221 122 RDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLL----GGKGYGEAVDIWSLGVILYELLW-- 195 (225)
T ss_pred CCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhc----CCCCCCchhhHHHHHHHHHHHHH--
Confidence 999999999999999999999998876543200000011111223344321 33344568999999999999998
Q ss_pred ccCCCCc
Q 012411 372 LNSSVSE 378 (464)
Q Consensus 372 ~~~~~~~ 378 (464)
...++..
T Consensus 196 g~~pf~~ 202 (225)
T smart00221 196 GPEPFSG 202 (225)
T ss_pred CCCCccc
Confidence 4456644
No 412
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=7.9e-17 Score=148.24 Aligned_cols=141 Identities=21% Similarity=0.269 Sum_probs=100.9
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
||+|++|.||+|.+ +|..|+||+..+..... ..... ..+...+.+|.
T Consensus 2 ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~-----------------------~~~~~--------~~~~~~~~~E~ 48 (199)
T TIGR03724 2 IAKGAEAIIYLGDF--LGLKAVIKERVPKSYRH-----------------------PELDE--------RIRRERTRNEA 48 (199)
T ss_pred CCCCceEEEEEeec--CCccEEEEEecCCcCcC-----------------------chHHH--------HHHHHHHHHHH
Confidence 79999999999995 68999999965432110 00000 00011133445
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPH 295 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlk 295 (464)
+++..+.+ ..+.+|.++.......+++|||++|++|.+..... . . .+..++..++.++|+.|++|+|+|
T Consensus 49 ~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~--~--~--~~~~~i~~~l~~lH~~gi~H~Dl~ 117 (199)
T TIGR03724 49 RLLSRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEG--N--D--ELLREIGRLVGKLHKAGIVHGDLT 117 (199)
T ss_pred HHHHHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhc--H--H--HHHHHHHHHHHHHHHCCeecCCCC
Confidence 55555543 34678888877777789999999999998763321 1 1 445667789999999999999999
Q ss_pred CcceEEccCCcEEEEecCCCCcCCHH
Q 012411 296 PGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 296 p~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
|+||+++ +++++++|||+++.....
T Consensus 118 ~~Nil~~-~~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 118 TSNIIVR-DDKLYLIDFGLGKYSDEI 142 (199)
T ss_pred cceEEEE-CCcEEEEECCCCcCCCcH
Confidence 9999998 899999999998875443
No 413
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.70 E-value=1.1e-17 Score=160.22 Aligned_cols=188 Identities=17% Similarity=0.206 Sum_probs=128.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
..+|+|.||+|-.+.++.++..||||+++.- +.+++.-.-
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----------------------------------~kYreAa~i------ 134 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNV----------------------------------DKYREAALI------ 134 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHH----------------------------------HHHhhHHHH------
Confidence 5699999999999999989999999997621 111111111
Q ss_pred HHHHHHHHHHHh-CCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH---hcCCCHHHHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLY-ADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE---SQGLKVLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~-~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~gi 289 (464)
|..-+.++.+.- .+......-.-+.+|.+..+||.|.+ |.++.+....+ ..+.+..+.+..|+..++.+||+.++
T Consensus 135 Ei~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl 213 (415)
T KOG0671|consen 135 EIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKL 213 (415)
T ss_pred HHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcce
Confidence 122222222211 11222333444677889999999988 65777764322 23455667778899999999999999
Q ss_pred ccCCCCCcceEEcc--------------------CCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 012411 290 FHADPHPGNLLATP--------------------EGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (464)
Q Consensus 290 ~H~Dlkp~Nili~~--------------------~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (464)
+|-|+||+|||+.. +..|+++|||.+....+.. .. .+.+.-++.||.+ ..+|
T Consensus 214 ~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-s~---iVsTRHYRAPEVi----LgLG 285 (415)
T KOG0671|consen 214 THTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-ST---IVSTRHYRAPEVI----LGLG 285 (415)
T ss_pred eecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-ce---eeeccccCCchhe----eccC
Confidence 99999999999953 1248999999998765543 11 2223456667654 4566
Q ss_pred CCCCCCCcchHHHHHHHHHHHh
Q 012411 350 FLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 350 ~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
. +...|+||+||++.|++++.
T Consensus 286 w-S~pCDvWSiGCIL~ElytG~ 306 (415)
T KOG0671|consen 286 W-SQPCDVWSIGCILVELYTGE 306 (415)
T ss_pred c-CCccCceeeeeEEEEeeccc
Confidence 6 67899999999999988753
No 414
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.69 E-value=2.7e-17 Score=151.00 Aligned_cols=197 Identities=13% Similarity=0.159 Sum_probs=125.3
Q ss_pred HHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHH
Q 012411 124 LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFAS 203 (464)
Q Consensus 124 ~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 203 (464)
+++.|.-. +.+|.|.||.+-.|.++.+.+.+|+|......... +
T Consensus 22 l~d~y~I~--k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~----------------------------------~ 65 (378)
T KOG1345|consen 22 LEDVYTIN--KQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQ----------------------------------A 65 (378)
T ss_pred hhhhhhHH--HHhcccceeeEEeeeccCCceEEEeeccCcchhhH----------------------------------H
Confidence 44444433 67999999999999999999999999875332111 1
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHH
Q 012411 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQ 283 (464)
Q Consensus 204 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~ 283 (464)
.+.+|..|.-+...+..+...|. |-.+.+.-.+++|||++-|+|..-......|+.....+..++.+++.+
T Consensus 66 dF~rEfhY~~~Ls~H~hIi~tY~---------vaFqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~f 136 (378)
T KOG1345|consen 66 DFVREFHYSFFLSPHQHIIDTYE---------VAFQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEF 136 (378)
T ss_pred HHHHHhccceeeccchhhhHHHH---------HHhhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHH
Confidence 12233333322222222111110 001112334699999999999775443445556667888999999999
Q ss_pred HHHCCcccCCCCCcceEEc--cCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHcC-CCCCCCCcch
Q 012411 284 LLEYGYFHADPHPGNLLAT--PEGKLAFLDFGMMSETPEEARFAIIGHVVHMVN-RDYEAMARDYYALD-FLSPDVDVTP 359 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~--~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g-~~~~~~D~~s 359 (464)
+|+.+++|||||.+||||- +.-+|||+|||.......... -..+..+ ..|+.+ ....+-. ...+..|+|.
T Consensus 137 MHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~-----~~~~~~~y~~pe~~-~~~~ne~~~~~ps~D~Wq 210 (378)
T KOG1345|consen 137 MHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVK-----YLEYVNNYHAPELC-DTVVNEKLVVNPSTDIWQ 210 (378)
T ss_pred hhccchhhcccccceEEEecCCccEEEeeecccccccCceeh-----hhhhhcccCCcHHH-hhccccceEecccccchh
Confidence 9999999999999999995 345799999999876543211 0111111 223322 2221111 3478899999
Q ss_pred HHHHHHHHHHHh
Q 012411 360 IVPALRNFFDDA 371 (464)
Q Consensus 360 l~~~l~~~~~~~ 371 (464)
||..++..+++.
T Consensus 211 fGIi~f~cltG~ 222 (378)
T KOG1345|consen 211 FGIIFFYCLTGK 222 (378)
T ss_pred eeeeeeeeecCC
Confidence 999988888743
No 415
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.69 E-value=1.9e-17 Score=179.37 Aligned_cols=144 Identities=22% Similarity=0.275 Sum_probs=97.6
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|+||.||+|.+..+|+.||||+++...... ......+..|++
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~------------------------------~~~~~~~~~E~~--- 56 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN------------------------------KNMVHQVQAERD--- 56 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC------------------------------HHHHHHHHHHHH---
Confidence 78999999999999998889999999986431100 000011111211
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHA 292 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~ 292 (464)
.+.. + .++.+.-...........++||||++|++|.++..... ........+..++..+|.|||..||+|+
T Consensus 57 ---~l~~----l-~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHr 128 (669)
T cd05610 57 ---ALAL----S-KSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHR 128 (669)
T ss_pred ---HHHh----c-CCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 1111 1 12222111112223456799999999999988754221 1223344556778889999999999999
Q ss_pred CCCCcceEEccCCcEEEEecCCCCcC
Q 012411 293 DPHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 293 Dlkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
||||+|||++.+|.++|+|||+++..
T Consensus 129 DLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 129 DLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred CccHHHEEEcCCCCEEEEeCCCCccc
Confidence 99999999999999999999998754
No 416
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.69 E-value=8.6e-18 Score=174.52 Aligned_cols=188 Identities=19% Similarity=0.232 Sum_probs=126.7
Q ss_pred CCcccccceec-EEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 132 SPSPIAAASLG-QVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 132 ~~~pig~Gs~g-qV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
.++.+|.|+-| .||+|.. .|++||||.+- .++.+...+|++
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll------------------------------------~e~~~~A~rEi~ 554 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLL------------------------------------EEFFDFAQREIQ 554 (903)
T ss_pred cHHHcccCCCCcEEEEEee--CCceehHHHHh------------------------------------hHhHHHHHHHHH
Confidence 35778899987 5799998 69999999653 333344556666
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCC-----CCceEEEeeecCcccCcHHHHH-----hcC-CCHHHHHHHHHHH
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYT-----SGKVLTMEWVEGVKLNEQVAIE-----SQG-LKVLDLVNTGIQC 279 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LvmE~~~G~~L~~~~~~~-----~~~-~~~~~~~~~~i~~ 279 (464)
.++|-.. + |.|+..|| .-.||+.|.|.- +|.++.... ..+ ++.. .+..++..
T Consensus 555 lL~eSD~----------H-----~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~i~~~-~~l~q~~~ 617 (903)
T KOG1027|consen 555 LLQESDE----------H-----PNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSDIDPI-SVLSQIAS 617 (903)
T ss_pred HHHhccC----------C-----CceEEEEeeccCCceEEEEehHhhh-hHHHHHhccccchhhcccccHH-HHHHHHHH
Confidence 6655432 2 22222233 235899999965 787764432 111 2222 34467778
Q ss_pred HHHHHHHCCcccCCCCCcceEEcc---CC--cEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCC
Q 012411 280 SLRQLLEYGYFHADPHPGNLLATP---EG--KLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPD 354 (464)
Q Consensus 280 ~l~~lh~~gi~H~Dlkp~Nili~~---~g--~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 354 (464)
|+.+||+.+|+|||+||+||||+. ++ +++|.|||+++.++..... +.. .+-..+...+.+++....+.-...
T Consensus 618 GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS-~~r--~s~~sGt~GW~APE~L~~~~~~~a 694 (903)
T KOG1027|consen 618 GLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS-FSR--LSGGSGTSGWQAPEQLREDRKTQA 694 (903)
T ss_pred HHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch-hhc--ccCCCCcccccCHHHHhccccCcc
Confidence 999999999999999999999985 34 5899999999998765322 111 233445566666666666666778
Q ss_pred CCcchHHHHHHHHHHHhccCCCCc
Q 012411 355 VDVTPIVPALRNFFDDALNSSVSE 378 (464)
Q Consensus 355 ~D~~sl~~~l~~~~~~~~~~~~~~ 378 (464)
+|+.++||.++..+++ +..|+++
T Consensus 695 vDiFslGCvfyYvltg-G~HpFGd 717 (903)
T KOG1027|consen 695 VDIFSLGCVFYYVLTG-GSHPFGD 717 (903)
T ss_pred cchhhcCceEEEEecC-CccCCCc
Confidence 9999999998776663 3345543
No 417
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.68 E-value=4e-17 Score=158.36 Aligned_cols=190 Identities=16% Similarity=0.184 Sum_probs=124.8
Q ss_pred cccccceecEEEEEEEcc---CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 134 SPIAAASLGQVYKAQLKY---SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~---~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
++||.|+|+.||+|.+.. .++.||+|-+++.. || .++..|+.
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-------------------------~p----------~ri~~El~ 86 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-------------------------SP----------SRILNELE 86 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeeccccc-------------------------Cc----------hHHHHHHH
Confidence 789999999999999985 57889999887541 11 11334444
Q ss_pred HHHHHH---HHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC
Q 012411 211 YVQEGQ---NARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 211 ~~~Ea~---n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 287 (464)
++.++. |+..+...+... ...++||||++.....++ ....+....+.+.+.+..+|.++|..
T Consensus 87 ~L~~~gG~~ni~~~~~~~rnn-------------d~v~ivlp~~~H~~f~~l--~~~l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 87 MLYRLGGSDNIIKLNGCFRNN-------------DQVAIVLPYFEHDRFRDL--YRSLSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred HHHHhccchhhhcchhhhccC-------------CeeEEEecccCccCHHHH--HhcCCHHHHHHHHHHHHHHhhhhhcc
Confidence 444433 222222333222 455799999998777666 44555666677778888899999999
Q ss_pred CcccCCCCCcceEEc-cCCcEEEEecCCCCcCCHHHHHHHHHH------------------HHH-------HH-------
Q 012411 288 GYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEEARFAIIGH------------------VVH-------MV------- 334 (464)
Q Consensus 288 gi~H~Dlkp~Nili~-~~g~i~l~DFGl~~~l~~~~~~~~~~~------------------~~~-------~~------- 334 (464)
||+|||+||+|+|.+ ..++-.|+|||++...+...+..-+.. +.+ ..
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~ 231 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRP 231 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCcc
Confidence 999999999999998 457899999999985333221111111 000 00
Q ss_pred ------hcCHH-HHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhcc
Q 012411 335 ------NRDYE-AMARDYYALDFLSPDVDVTPIVPALRNFFDDALN 373 (464)
Q Consensus 335 ------~~~~~-~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~ 373 (464)
.+.+. ...+.+...+--++++|+||.|..+..+++..++
T Consensus 232 ~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~P 277 (418)
T KOG1167|consen 232 SERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYP 277 (418)
T ss_pred ceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccc
Confidence 00111 1122344555557789999999999888875544
No 418
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.66 E-value=1.9e-16 Score=169.36 Aligned_cols=233 Identities=18% Similarity=0.183 Sum_probs=150.8
Q ss_pred cccccceecEEEEEEEcc---C----CcEEEEEEecCChHH----HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY---S----GQIVAVKVQRPGIEE----AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFA 202 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~---~----g~~VAVKv~~p~~~~----~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (464)
+++|+|.||+|++|.... . ...||||..+....+ .+...+++|+.+ ..|+|++.++..+.
T Consensus 302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~---------g~H~niv~llG~~t 372 (609)
T KOG0200|consen 302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKEL---------GKHPNIVNLLGACT 372 (609)
T ss_pred ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHh---------cCCcchhhheeeec
Confidence 389999999999998641 1 457999998866443 122222222222 13677766665433
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh---------------cCC
Q 012411 203 SRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES---------------QGL 267 (464)
Q Consensus 203 ~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~---------------~~~ 267 (464)
+ .+..++|+||+..|+|.++....+ ..+
T Consensus 373 ~-------------------------------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L 415 (609)
T KOG0200|consen 373 Q-------------------------------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDAL 415 (609)
T ss_pred c-------------------------------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCc
Confidence 2 256789999999999998765444 114
Q ss_pred CHHHH--HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHH---HHHHHHHHHhcCHHHHH
Q 012411 268 KVLDL--VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFA---IIGHVVHMVNRDYEAMA 342 (464)
Q Consensus 268 ~~~~~--~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~---~~~~~~~~~~~~~~~~~ 342 (464)
....+ ...||+.+++||.+.+++|||+-..|||+..+..+|++|||+++......... -.++ +- ..+++
T Consensus 416 ~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP-----~kWmA 489 (609)
T KOG0200|consen 416 TTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGT-LP-----VKWMA 489 (609)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCc-cc-----eeecC
Confidence 44444 45788889999999999999999999999999999999999999654332110 0111 11 11333
Q ss_pred HHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCc-HHHHHHHHHHHHh-hCCCCCChHHHHHHHHHHHHHHhhccc
Q 012411 343 RDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELN-FKTIVDGLGAVLY-QYPFNVPAYYALILRSLTVLEGLALYA 420 (464)
Q Consensus 343 ~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~-~~~~~~p~~~~~l~r~l~~leg~~~~l 420 (464)
++-+.-...+.++|+||+|..++|+++ ....|+.+.. ..++.+-+...-+ ..|...++++-.+++.. =..
T Consensus 490 pEsl~~~~ft~kSDVWSfGI~L~Eifs-LG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~C-------W~~ 561 (609)
T KOG0200|consen 490 PESLFDRVFTSKSDVWSFGILLWEIFT-LGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSC-------WNA 561 (609)
T ss_pred HHHhccCcccccchhhHHHHHHHHHhh-CCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH-------hCC
Confidence 333333455888999999999999887 3556666544 3344332322222 34555566666666554 355
Q ss_pred CCCCCh
Q 012411 421 DPNFKV 426 (464)
Q Consensus 421 dP~~~~ 426 (464)
+|+.++
T Consensus 562 ~p~~RP 567 (609)
T KOG0200|consen 562 DPEDRP 567 (609)
T ss_pred CcccCC
Confidence 665544
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=1.2e-15 Score=139.08 Aligned_cols=137 Identities=18% Similarity=0.234 Sum_probs=93.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+++|+||+||.+.. .+.+++.+...-... .++.++ ... +.+
T Consensus 8 ~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~--------~~~~~~---------------------~~l------~~r 50 (218)
T PRK12274 8 EPLKSDTFGRILLVRG--GERKFVRRDLSAAPW--------WLRGVA---------------------WWL------ARR 50 (218)
T ss_pred eeecCCCcceEEEeec--CCceeeecccccchh--------hhhhHH---------------------HHH------HHH
Confidence 6799999999997765 677887665532100 001000 011 234
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|++.+.++.+ ...+|+++.. +..+++|||++|.+|.+.... + .. .+..++..++.++|+.|++|+|
T Consensus 51 E~~iL~~L~~------~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~~---~--~~-~~~~qi~~~L~~lH~~GIvHrD 116 (218)
T PRK12274 51 EALALRQLDG------LPRTPRLLHW--DGRHLDRSYLAGAAMYQRPPR---G--DL-AYFRAARRLLQQLHRCGVAHND 116 (218)
T ss_pred HHHHHHhcCC------CCCCCEEEEE--cCEEEEEeeecCccHHhhhhh---h--hH-HHHHHHHHHHHHHHHCcCccCC
Confidence 4555544432 1346777653 567999999999998653211 1 11 2345667799999999999999
Q ss_pred C-CCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 294 P-HPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 294 l-kp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
+ ||+|||++++|+++|+|||++....+.
T Consensus 117 L~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 117 LAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred CCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 9 799999999999999999999876544
No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.60 E-value=7.7e-15 Score=135.61 Aligned_cols=141 Identities=14% Similarity=0.114 Sum_probs=85.2
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
.++||+|++|.||. ++.++.. +||+.+++.... .+.+.+|++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~---------------------------------~~~~~rEi~-- 48 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGG---------------------------------DKEIRRELK-- 48 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccch---------------------------------HHHHHHHHH--
Confidence 47899999999995 5556665 699987541110 011223332
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCC-----ce-EEEee--ecCcccCcHHHHHhcCCCHHHHHHHHHHH-HHHH
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSG-----KV-LTMEW--VEGVKLNEQVAIESQGLKVLDLVNTGIQC-SLRQ 283 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~-----~~-LvmE~--~~G~~L~~~~~~~~~~~~~~~~~~~~i~~-~l~~ 283 (464)
.+..+.+.-.+ +-.++++|..+.+. .+ +|||| +.+++|.++.... ..+.......++.. +++|
T Consensus 49 ----~l~~L~~~~~~--h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~~~~~~~~L~~l~~y 120 (210)
T PRK10345 49 ----YYAHLSRRLID--WSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEEDVAQLRQLLKKLKRY 120 (210)
T ss_pred ----HHHHhhccCCC--CcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHhHHHHHHHHHHHHHH
Confidence 22223221112 22355555544333 12 78999 5578999886432 23332222334444 4599
Q ss_pred HHHCCcccCCCCCcceEEccC----CcEEEEe-cCCCCcCC
Q 012411 284 LLEYGYFHADPHPGNLLATPE----GKLAFLD-FGMMSETP 319 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~~~----g~i~l~D-FGl~~~l~ 319 (464)
||++||+|||+||+|||++.. ++++|+| ||....++
T Consensus 121 Lh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ip 161 (210)
T PRK10345 121 LLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTFIP 161 (210)
T ss_pred HHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcceee
Confidence 999999999999999999743 3799999 55444433
No 421
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.60 E-value=2.9e-15 Score=141.32 Aligned_cols=187 Identities=19% Similarity=0.287 Sum_probs=123.9
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||+||||..+.|+...++++||||.-.. +....++.+|++
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPr---------------------------kS~APQLrdEYr----------- 75 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPR---------------------------KSEAPQLRDEYR----------- 75 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccc---------------------------cCCcchHHHHHH-----------
Confidence 679999999999999988999999998532 223334444443
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccC-C-CCceEEEeeecCcccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDY-T-SGKVLTMEWVEGVKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~-~~~~LvmE~~~G~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi 289 (464)
+.+.+...+ -||.||.-- | -...||||.+ |.+|.|+-......+..+ ..+..|+..-++++|++.+
T Consensus 76 -------~YKlL~g~~--GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~L 145 (449)
T KOG1165|consen 76 -------TYKLLGGTE--GIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDL 145 (449)
T ss_pred -------HHHHHcCCC--CCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcce
Confidence 334444433 367766533 2 3458999998 889998755544444444 4555677778999999999
Q ss_pred ccCCCCCcceEEccCC-----cEEEEecCCCCcC-CHH--------HHHHHHHHHHHHHhcCHHHHHHHHHHcCC-CCCC
Q 012411 290 FHADPHPGNLLATPEG-----KLAFLDFGMMSET-PEE--------ARFAIIGHVVHMVNRDYEAMARDYYALDF-LSPD 354 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~g-----~i~l~DFGl~~~l-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~ 354 (464)
|.||+||+|+||...| .|.++||||++.. +++ .+..+.|+..+|.-.. -+|- -+..
T Consensus 146 IYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINT---------HlGrEQSRR 216 (449)
T KOG1165|consen 146 IYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINT---------HLGREQSRR 216 (449)
T ss_pred eecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeec---------cccchhhhh
Confidence 9999999999997443 4899999999975 222 3344566655443211 0111 1334
Q ss_pred CCcchHHHHHHHHHHHhccCCCCcC
Q 012411 355 VDVTPIVPALRNFFDDALNSSVSEL 379 (464)
Q Consensus 355 ~D~~sl~~~l~~~~~~~~~~~~~~~ 379 (464)
-|+.++|-.+..++. .+.|+.++
T Consensus 217 DDLEaLGHvFmYFLR--GsLPWQGL 239 (449)
T KOG1165|consen 217 DDLEALGHVFMYFLR--GSLPWQGL 239 (449)
T ss_pred hhHHHhhhhhhhhcc--CCCccccc
Confidence 567777776666665 34455443
No 422
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.60 E-value=6.2e-15 Score=156.01 Aligned_cols=143 Identities=17% Similarity=0.207 Sum_probs=100.5
Q ss_pred CCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 132 SPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 132 ~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
..+.||+|++|.||+|.+. +..+++|+..+...... .+-.. ...-.+
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~--------------------------~~~~~-----~~~~~~ 383 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHP--------------------------ELDER-----LRTERT 383 (535)
T ss_pred ccceeccCCcEEEEEEeec--CccceeEEEecccccch--------------------------hHHHH-----HHHHHH
Confidence 3578999999999999874 55667776543211100 00000 001123
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCccc
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
.+|++.+.++.+ +.+..|.++.......++||||++|++|.+... ....+..++..++.++|+.|++|
T Consensus 384 ~~E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~-------~~~~~~~~i~~~L~~lH~~giiH 451 (535)
T PRK09605 384 RAEARLLSEARR-----AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE-------GNPELVRKVGEIVAKLHKAGIVH 451 (535)
T ss_pred HHHHHHHHhhcc-----cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH-------HHHHHHHHHHHHHHHHHhCCCcc
Confidence 455555555532 456677777766677899999999999987643 12334567778999999999999
Q ss_pred CCCCCcceEEccCCcEEEEecCCCCcCCH
Q 012411 292 ADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (464)
Q Consensus 292 ~Dlkp~Nili~~~g~i~l~DFGl~~~l~~ 320 (464)
||+||+|||+ .+++++|+|||+++..+.
T Consensus 452 rDlkp~NILl-~~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 452 GDLTTSNFIV-RDDRLYLIDFGLGKYSDL 479 (535)
T ss_pred CCCChHHEEE-ECCcEEEEeCcccccCCc
Confidence 9999999999 688999999999987654
No 423
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.58 E-value=2.8e-14 Score=129.68 Aligned_cols=162 Identities=20% Similarity=0.265 Sum_probs=107.5
Q ss_pred cccccceecEEEEEEEcc------CCcEEEEEEecCChHHHHHHHHHHHHHHHHHH--H-hchh-cccCCHHHHHHHHHH
Q 012411 134 SPIAAASLGQVYKAQLKY------SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLI--N-KYVD-IITTDVVALIDEFAS 203 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~------~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~--~-~~~~-~~~~~i~~~~~~~~~ 203 (464)
.+||.|.-+.||.|.... ++..+|||+.+.+..+- +.....+ + ++.. ..+.|...++....+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F--------k~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~ 74 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF--------KNRDKYIKDDYRFKDRFSKLNPRKIIRMWAE 74 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE--------cChhhhccCCcccccCcCCCCHHHHHHHHHH
Confidence 479999999999998652 24799999998553321 1111111 0 1100 113566666665443
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHH
Q 012411 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSL 281 (464)
Q Consensus 204 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l 281 (464)
+|.+++.++... .+.+|+++.. ...+|||||+.|..+... .+.....+ ....+..++..++
T Consensus 75 ---------kE~r~L~rl~~~-----Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~~~i~~~i~~~l 137 (197)
T cd05146 75 ---------KEMHNLKRMQKA-----GIPCPEVVVL--KKHVLVMSFIGDDQVPAP-KLKDAKLNDEEMKNAYYQVLSMM 137 (197)
T ss_pred ---------HHHHHHHHHHHc-----CCCCCeEEEe--cCCEEEEEEcCCCCccch-hhhccccCHHHHHHHHHHHHHHH
Confidence 478888888764 6789999864 789999999987544221 11111222 1222334555677
Q ss_pred HHH-HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 282 RQL-LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 282 ~~l-h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
..+ |+.|++|+||+|.||++. +|+++|+|||.+...+..
T Consensus 138 ~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~hp 177 (197)
T cd05146 138 KQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTHP 177 (197)
T ss_pred HHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCCCC
Confidence 766 899999999999999996 678999999999887643
No 424
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.56 E-value=2.6e-14 Score=141.74 Aligned_cols=222 Identities=14% Similarity=0.185 Sum_probs=130.2
Q ss_pred CcccccceecEEEEEEEccCC-cEEEEEEecCChHH---HHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSG-QIVAVKVQRPGIEE---AIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g-~~VAVKv~~p~~~~---~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
...||+|+||+||.+....++ ..+|+|+....... .+..+..+++.+
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l----------------------------- 73 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKL----------------------------- 73 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHH-----------------------------
Confidence 478999999999999987453 68999988643111 122222222211
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccC-CC--CceEEEeeecCcccCcHHHHHh-cCCCH--HHHHHHHHHHHHH
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDY-TS--GKVLTMEWVEGVKLNEQVAIES-QGLKV--LDLVNTGIQCSLR 282 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~--~~~LvmE~~~G~~L~~~~~~~~-~~~~~--~~~~~~~i~~~l~ 282 (464)
.. ....-.+|.+++.. .. ..++||+.+ |.+|.++..... ..+.. ...+..|+..+|+
T Consensus 74 -------------~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~ 136 (322)
T KOG1164|consen 74 -------------EK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALE 136 (322)
T ss_pred -------------hh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHH
Confidence 11 11233467766655 22 459999988 889998754333 22333 3445566777999
Q ss_pred HHHHCCcccCCCCCcceEEccC-----CcEEEEecCCCC--cCCHHH----------HHHHHHHHHHHHhcCHHHHHHHH
Q 012411 283 QLLEYGYFHADPHPGNLLATPE-----GKLAFLDFGMMS--ETPEEA----------RFAIIGHVVHMVNRDYEAMARDY 345 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~~-----g~i~l~DFGl~~--~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 345 (464)
++|+.|++|||+||+|+++... ..+.++|||+++ ...... +..+.|+ ...+....
T Consensus 137 ~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT--------~ry~S~~~ 208 (322)
T KOG1164|consen 137 DLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGT--------LRYASINV 208 (322)
T ss_pred HHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCc--------cccccHHH
Confidence 9999999999999999999855 359999999999 421111 1111222 22222222
Q ss_pred HHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhh-----CCCCCChHHHHHHHHH
Q 012411 346 YALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQ-----YPFNVPAYYALILRSL 410 (464)
Q Consensus 346 ~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~p~~~~~l~r~l 410 (464)
....-.+..-|+|++.-.+.++..+. .|+...........+...... +....|+.+..+...+
T Consensus 209 H~~~e~~r~DDles~~Y~l~el~~g~--LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (322)
T KOG1164|consen 209 HLGIEQGRRDDLESLFYMLLELLKGS--LPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYI 276 (322)
T ss_pred hCCCccCCchhhhhHHHHHHHHhcCC--CCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHh
Confidence 22223466779999776666666532 555444322223333322222 2233556665555544
No 425
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.56 E-value=2.9e-14 Score=127.43 Aligned_cols=131 Identities=21% Similarity=0.310 Sum_probs=96.5
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+|++.|.+++||+++. +|..|++|+..++.. ...++..
T Consensus 4 ~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----------------------------------------~~~~~~~ 41 (170)
T cd05151 4 SPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----------------------------------------LLINREN 41 (170)
T ss_pred eecCCcccCceEEEEE--CCeEEEEEeCCCCcc----------------------------------------cccCHHH
Confidence 7899999999999997 588999999765421 0123344
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCc----
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGY---- 289 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi---- 289 (464)
|+..+..+.+. ..+|+++....+..++||||++|.++.+.. ... .....++..++..+|..++
T Consensus 42 E~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~-----~~~--~~~~~~l~~~l~~LH~~~~~~~~ 108 (170)
T cd05151 42 EAENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTED-----FSD--PENLEKIAKLLKKLHSSPLPDLV 108 (170)
T ss_pred HHHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCcccccc-----ccC--HHHHHHHHHHHHHHhCCCCCCce
Confidence 56565555442 126888877666789999999999887531 011 1223456678999999885
Q ss_pred -ccCCCCCcceEEccCCcEEEEecCCCCcCCH
Q 012411 290 -FHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (464)
Q Consensus 290 -~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~ 320 (464)
+|+|+||+||+++ +++++++|||.+..-++
T Consensus 109 ~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~~ 139 (170)
T cd05151 109 PCHNDLLPGNFLLD-DGRLWLIDWEYAGMNDP 139 (170)
T ss_pred eecCCCCcCcEEEE-CCeEEEEecccccCCCh
Confidence 9999999999998 77899999999886543
No 426
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.54 E-value=4.2e-14 Score=128.04 Aligned_cols=174 Identities=22% Similarity=0.270 Sum_probs=101.1
Q ss_pred EEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcc----cCCHHHHHHHHHHHHHHHhcHHHHHHHH
Q 012411 143 QVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDII----TTDVVALIDEFASRVYQELNYVQEGQNA 218 (464)
Q Consensus 143 qV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~Eld~~~Ea~n~ 218 (464)
.||.|... +|..||||+-+.+... + +........-..+. +.+...+. .....+|++++
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~-F-------k~~~~y~~~~~r~~~~~~~~~~~~~~---------~~~~~~E~~~L 62 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTS-F-------KRRKKYRDYDYRFKKYRHKSSWRYLI---------REWAKKEFRNL 62 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---S-S--------HHHHHTTTSTTSTTC--G--CHHHH---------HHHHHHHHHHH
T ss_pred CEEEEECC-CCCEEEEEEeccCceE-E-------EEeeeeecccchhcccccccCHHHHH---------HHHHHHHHHHH
Confidence 38999987 8999999999876322 1 11111111111111 11222221 12344567777
Q ss_pred HHHHHHhCCCCCEEeceeeccCCCCceEEEeeec--CcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCC
Q 012411 219 RRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVE--GVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHP 296 (464)
Q Consensus 219 ~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~--G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp 296 (464)
.++.. .++.+|++|.- +..+|||||++ |.++..+............++...+......+|..|++|+|+++
T Consensus 63 ~~l~~-----~Gv~vP~p~~~--~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~ 135 (188)
T PF01163_consen 63 KRLYE-----AGVPVPKPYDY--NRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSE 135 (188)
T ss_dssp HHCCC-----TT-SS--EEEE--ETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-ST
T ss_pred HHHHH-----CCccCCcEEEE--eCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCCh
Confidence 66643 45789998854 67899999999 88887764433223455555555555466677899999999999
Q ss_pred cceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcC
Q 012411 297 GNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALD 349 (464)
Q Consensus 297 ~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (464)
.||+++++ ++.+||||.+........ ..++.+|.+.+...+-..|
T Consensus 136 ~NIlv~~~-~~~iIDf~qav~~~~p~a-------~~~l~RDi~ni~~fF~~~~ 180 (188)
T PF01163_consen 136 YNILVDDG-KVYIIDFGQAVDSSHPNA-------EELLRRDIENIIRFFKKKG 180 (188)
T ss_dssp TSEEEETT-CEEE--GTTEEETTSTTH-------HHHHHHHHHHHHHHHHCCC
T ss_pred hhEEeecc-eEEEEecCcceecCCccH-------HHHHHHHHHHHHHHHHHhC
Confidence 99999776 999999999887654321 1344556666666555444
No 427
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.51 E-value=1.3e-13 Score=119.73 Aligned_cols=134 Identities=20% Similarity=0.268 Sum_probs=95.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+++|+|+++.||++... +..++||+..+... +.++..
T Consensus 4 ~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----------------------------------------~~~~~~ 40 (155)
T cd05120 4 KLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----------------------------------------GADRER 40 (155)
T ss_pred eecccccccceEEEEec--CCeEEEEecCCCCc-----------------------------------------hhHHHH
Confidence 67999999999999984 57899999865421 011233
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCC--CCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHC---C
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYT--SGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEY---G 288 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~--~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---g 288 (464)
|...+..+.+. ...+|+++.... +..+++|||++|.++... ...........+..++.++|.. |
T Consensus 41 e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~------~~~~~~~~~~~~~~~l~~lh~~~~~~ 109 (155)
T cd05120 41 EVAILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEV------SEEEKEDIAEQLAELLAKLHQLPLLV 109 (155)
T ss_pred HHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccC------CHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 44444444442 344666655443 468999999999888754 1112223445666788999984 7
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
++|+|+||+||++++++.++++|||.+...++.
T Consensus 110 i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~ 142 (155)
T cd05120 110 LCHGDLHPGNILVDDGKILGIIDWEYAGYGPPA 142 (155)
T ss_pred EEecCCCcceEEEECCcEEEEEecccccCCChH
Confidence 999999999999999899999999999875543
No 428
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=1.8e-13 Score=129.51 Aligned_cols=148 Identities=18% Similarity=0.205 Sum_probs=95.3
Q ss_pred cccc-cceecEEEEEEEccCCcEEEEEEecC-ChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIA-AASLGQVYKAQLKYSGQIVAVKVQRP-GIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig-~Gs~gqV~~a~~~~~g~~VAVKv~~p-~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
..|| .|+.|.||.+.. +|..+|||.... ++...+..+. +.-.....-.+
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~---------------------------~~~~~~~~~r~ 87 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDR---------------------------YLFTGLERTRA 87 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhc---------------------------ccccchhhhHH
Confidence 5687 899999999987 588999998753 2211110000 00000011123
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccC---CC---CceEEEeeecC-cccCcHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDY---TS---GKVLTMEWVEG-VKLNEQVAIESQGLKVLDLVNTGIQCSLRQL 284 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~---~~---~~~LvmE~~~G-~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 284 (464)
.+|...+.++.+ .++.+|.++... .. ..++||||++| .+|.+... ....+.. ...++..++.++
T Consensus 88 ~rE~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~--~~~l~~~--~~~~i~~~l~~l 158 (239)
T PRK01723 88 FAEFRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQ--EAPLSEE--QWQAIGQLIARF 158 (239)
T ss_pred HHHHHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHh--cCCCCHH--HHHHHHHHHHHH
Confidence 445555555543 344556554321 11 23599999998 57766532 2223332 235677899999
Q ss_pred HHCCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 285 LEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
|+.|++|+|+||+|||++++++++|+|||.+....
T Consensus 159 H~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 159 HDAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT 193 (239)
T ss_pred HHCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence 99999999999999999999999999999988754
No 429
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=3e-12 Score=112.85 Aligned_cols=140 Identities=18% Similarity=0.267 Sum_probs=100.4
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
.++++|+-+.++.+.+. |.++++|..-|..-. |+.+.+-+. +| .-.+
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR-----------------------~p~LD~klr-------r~-Rt~~ 48 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYR-----------------------HPELDEKLR-------RE-RTRR 48 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccC-----------------------ChHHHHHHH-------HH-HHHH
Confidence 46889999999999774 767999987655322 222221111 11 1346
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
||+.+.+.+.. .|.+|.+|.-......|+|||++|..|.+..... ..+ +..-+-..+.-||..||+|+|
T Consensus 49 Earil~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~--~~~----~~r~vG~~vg~lH~~givHGD 117 (204)
T COG3642 49 EARILAKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA--RPD----LLREVGRLVGKLHKAGIVHGD 117 (204)
T ss_pred HHHHHHHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc--chH----HHHHHHHHHHHHHhcCeecCC
Confidence 78877777764 7889999998888889999999998888763322 111 223334456789999999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcC
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
|.++||++..+ ++.+||||++..-
T Consensus 118 LTtsNiIl~~~-~i~~IDfGLg~~s 141 (204)
T COG3642 118 LTTSNIILSGG-RIYFIDFGLGEFS 141 (204)
T ss_pred CccceEEEeCC-cEEEEECCccccc
Confidence 99999999544 4999999998754
No 430
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=1.8e-13 Score=148.36 Aligned_cols=139 Identities=22% Similarity=0.312 Sum_probs=92.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|.|++|+||+|... +|+.||+|+.+|... .+..|...+...+ . ..
T Consensus 704 ~e~G~g~y~~vy~a~~~-~~~~~alK~e~P~~~----WEfYI~~q~~~RL----------------------k-----~~ 751 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHS-NGKLVALKVEKPPNP----WEFYICLQVMERL----------------------K-----PQ 751 (974)
T ss_pred eeeccccceEEEEeecC-CCcEEEEEeecCCCc----eeeeehHHHHHhh----------------------c-----hh
Confidence 67999999999999998 699999999998622 2222222221111 0 00
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCccc
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFH 291 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H 291 (464)
....+..+...+ -+.+..+||+||.+-|+|.++.. .....+ ..-.+..+++..++++|..||||
T Consensus 752 ~~~~~~~~~~a~-------------~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIH 817 (974)
T KOG1166|consen 752 MLPSIMHISSAH-------------VFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIH 817 (974)
T ss_pred hhcchHHHHHHH-------------ccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceec
Confidence 011111111111 13467789999999999999855 222222 23344566777999999999999
Q ss_pred CCCCCcceEEcc-------CCcEEEEecCCCCcC
Q 012411 292 ADPHPGNLLATP-------EGKLAFLDFGMMSET 318 (464)
Q Consensus 292 ~Dlkp~Nili~~-------~g~i~l~DFGl~~~l 318 (464)
+||||.|+|+.. .-.++|||||.+-.+
T Consensus 818 gDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 818 GDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred ccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 999999999962 124999999987643
No 431
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.39 E-value=1.7e-11 Score=113.25 Aligned_cols=183 Identities=21% Similarity=0.221 Sum_probs=118.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHH--hchhcccCCHHHHHHHHHHHHHHHhcH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLIN--KYVDIITTDVVALIDEFASRVYQELNY 211 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~Eld~ 211 (464)
-+|.+|.-+.||+|... ++..||||+.+......-. +..... ..+.....|...++..+.
T Consensus 54 g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~--------~~~Yi~gd~Rf~~~~~~rr~lv~~W~--------- 115 (268)
T COG1718 54 GCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKR--------IRRYIQGDPRFRNSRSNRRKLVFAWA--------- 115 (268)
T ss_pred eeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhh--------HHHHHhcChhhhcCCCCHHHHHHHHH---------
Confidence 37889999999999975 8999999999876443211 111111 111112236666666554
Q ss_pred HHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCH--HHHHHHHHHHHHH-HHHHCC
Q 012411 212 VQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKV--LDLVNTGIQCSLR-QLLEYG 288 (464)
Q Consensus 212 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~--~~~~~~~i~~~l~-~lh~~g 288 (464)
..|-+|+.++.+ .+|.+|+++.- ...+|||||+... -.-...+...+... ...+..++...+. ..+..|
T Consensus 116 ~kEf~NL~R~~e-----AGVrvP~Pi~~--~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~ 187 (268)
T COG1718 116 RKEFRNLKRAYE-----AGVRVPEPIAF--RNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAG 187 (268)
T ss_pred HHHHHHHHHHHH-----cCCCCCCceee--cCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcC
Confidence 457788888876 36889998854 5679999999654 22111222222222 2222233333344 444599
Q ss_pred cccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCC
Q 012411 289 YFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDF 350 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 350 (464)
++|+|+..=|||+. +|.+.+||||.+........ ..++.+|...+...+...|+
T Consensus 188 LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~a-------~e~L~RDv~Ni~~fF~r~gv 241 (268)
T COG1718 188 LVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPNA-------FEFLERDVRNIARFFRRKGV 241 (268)
T ss_pred cccccchhhheEEE-CCeEEEEECccccccCCCch-------HHHHHHHHHHHHHHHHHcCC
Confidence 99999999999997 89999999999988764422 23556677777777765554
No 432
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.37 E-value=3.7e-13 Score=149.15 Aligned_cols=127 Identities=11% Similarity=0.010 Sum_probs=78.4
Q ss_pred CceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEE----------
Q 012411 243 GKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFL---------- 310 (464)
Q Consensus 243 ~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~---------- 310 (464)
..+++|||++ ++|.++.......++ ....+..|+..||.|||++||+||||||+|||++..|.++++
T Consensus 54 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 54 SIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred hhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 4578889874 488877543222333 334566788899999999999999999999999765555555
Q ss_pred ---------ecCCCCcCCHHHH---H---HHHHHH----HHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 311 ---------DFGMMSETPEEAR---F---AIIGHV----VHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 311 ---------DFGl~~~l~~~~~---~---~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
|||+++....... . ...+.. .....+.+.++++++...+-.+.++|+|++||.++|++.+
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence 5554443211000 0 000000 0001122334444444444458899999999999999974
No 433
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.37 E-value=4.6e-13 Score=128.24 Aligned_cols=243 Identities=15% Similarity=0.153 Sum_probs=120.3
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
..+||.|+++.||.+++..+|+++|||+..-.. +....+++.+++-.-....+... .|...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~~~e~l~~~~~~~~--~~p~~---------------- 77 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQLKEEQLAITLFPGV--KNPKE---------------- 77 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHHHHHHHGGGGSTT----SHHH----------------
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHHHHHHHHhhhhccC--CCHHH----------------
Confidence 478999999999999999999999999986433 23333444443332221111100 11111
Q ss_pred HHHHHHHHHHHHh-----CCCCCEEecee----eccCCCCceEEEeeecCcccCcHHH-HHhcCCC--H-----HHHHHH
Q 012411 213 QEGQNARRFKKLY-----ADKEDVLVPDI----FWDYTSGKVLTMEWVEGVKLNEQVA-IESQGLK--V-----LDLVNT 275 (464)
Q Consensus 213 ~Ea~n~~~~~~~~-----~~~~~v~vP~v----~~~~~~~~~LvmE~~~G~~L~~~~~-~~~~~~~--~-----~~~~~~ 275 (464)
|....+|.--+ ...+....+.. |+- -..++.|.-+.+ +|.++.. +...... . ...+..
T Consensus 78 --a~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v--~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~ 152 (288)
T PF14531_consen 78 --AYRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWV--LNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTV 152 (288)
T ss_dssp --HHHHH-B---SEEEEETTS-SEEEECETTEEEEE--ESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHH
T ss_pred --HHHhceEEeeeEEEEEcCCCcceecCCCCcccee--ehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 11111111110 11111111111 110 133577777754 6655432 1111111 1 112234
Q ss_pred HHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHH----HcCCC
Q 012411 276 GIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYY----ALDFL 351 (464)
Q Consensus 276 ~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ 351 (464)
|+...++++|..|++|+|++|.|++++++|.+.|.||+.+......... . ...... +|+.+..... .--.+
T Consensus 153 Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~--~--~~~~~~-~PPe~~~~~~~~~~~~~~~ 227 (288)
T PF14531_consen 153 QMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC--S--EFPVAF-TPPELESCAGQFGQNNAPY 227 (288)
T ss_dssp HHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG--G--GS-TTT-S-HHHHHHHTSCHHSEEEE
T ss_pred HHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec--c--CCCccc-CChhhhhhhcccCccccee
Confidence 5556889999999999999999999999999999999987765443221 0 001122 2333332210 00123
Q ss_pred CCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHH
Q 012411 352 SPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSL 410 (464)
Q Consensus 352 ~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l 410 (464)
+.+.|.|++|+.++.+++.-+ |++.......... ...... .+|..+..+++.+
T Consensus 228 t~~~DaW~LG~~ly~lWC~~l--Pf~~~~~~~~~~~---~f~~C~-~~Pe~v~~LI~~l 280 (288)
T PF14531_consen 228 TFATDAWQLGITLYSLWCGRL--PFGLSSPEADPEW---DFSRCR-DMPEPVQFLIRGL 280 (288)
T ss_dssp -HHHHHHHHHHHHHHHHHSS---STCCCGGGSTSGG---GGTTSS----HHHHHHHHHH
T ss_pred eeccCHHHHHHHHHHHHHccC--CCCCCCccccccc---cchhcC-CcCHHHHHHHHHH
Confidence 567899999999999999544 3332211111100 112233 7888888888887
No 434
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.36 E-value=1.9e-11 Score=111.80 Aligned_cols=80 Identities=33% Similarity=0.570 Sum_probs=60.1
Q ss_pred EEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEE
Q 012411 231 VLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFL 310 (464)
Q Consensus 231 v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~ 310 (464)
+..-+-.+.+++..+|+|||++|.+|.+...... -....+..++.++|..|++|+||||||+++++ +.++++
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~e-------~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-~~i~iI 176 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIEDIDE-------DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-NGIRII 176 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchhcCH-------HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-CcEEEE
Confidence 3333445566778889999999999988643321 12233456789999999999999999999974 559999
Q ss_pred ecCCCCcC
Q 012411 311 DFGMMSET 318 (464)
Q Consensus 311 DFGl~~~l 318 (464)
||+..+..
T Consensus 177 D~~~k~~~ 184 (229)
T PF06176_consen 177 DTQGKRMS 184 (229)
T ss_pred ECcccccc
Confidence 99987754
No 435
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.36 E-value=2e-11 Score=113.83 Aligned_cols=176 Identities=22% Similarity=0.241 Sum_probs=112.2
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
++||-|.-|.||.|... .|.++|||.-|-+..+ .+.+.+..+.+....|.....+ -+....+|
T Consensus 97 ~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~Grts--------Frkvk~~R~y~~~~~h~sWl~~---sRl~A~rE----- 159 (304)
T COG0478 97 TKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTS--------FRKVKRNRDYLADKEHGSWLYV---SRLAAERE----- 159 (304)
T ss_pred cccccCccceEEEEECC-CCCEEEEEEeecCchh--------hhhhcchhhhhccccCcchhhh---HHHHHHHH-----
Confidence 78999999999999997 8999999999877222 1222222222222223221111 11112223
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
...+.++.. ..+.||+++.. +.+++|||+++|..|....- ...+...++...+ ..+.-+.+.|++|+|
T Consensus 160 -f~~L~~L~~-----~G~~VP~P~~~--nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il-~~~~~~~~~GiVHGD 227 (304)
T COG0478 160 -FEALQRLYP-----EGVKVPKPIAW--NRHAVVMEYIEGVELYRLRL---DVENPDEILDKIL-EEVRKAYRRGIVHGD 227 (304)
T ss_pred -HHHHHHhhh-----cCCCCCCcccc--ccceeeeehcccceeecccC---cccCHHHHHHHHH-HHHHHHHHcCccccC
Confidence 233333332 34678998864 78899999999998887632 2233444444433 344455599999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDY 345 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (464)
+.+-||++++||.++++||-.+...+..... ..+.+|.+.+...+
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v~~~hp~a~-------e~l~RDv~nii~yF 272 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAVPISHPDAE-------ELLERDVENIIKYF 272 (304)
T ss_pred CchheEEEecCCCEEEEeCcccccCCCCCHH-------HHHHhHHHHHHHHH
Confidence 9999999999999999999998877554322 23445555555444
No 436
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.30 E-value=1.1e-12 Score=127.32 Aligned_cols=188 Identities=20% Similarity=0.256 Sum_probs=117.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.+|.|+||+||++.+. ..+++|++.+...... ..... +.+
T Consensus 6 ~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~------------------------------~~~~~------~~~ 46 (384)
T COG0515 6 RKLGEGSFGEVYLARDR---KLVALKVLAKKLESKS------------------------------KEVER------FLR 46 (384)
T ss_pred EeecCCCCeEEEEEEec---cEEEEEeechhhccch------------------------------hHHHH------HHH
Confidence 57899999999999986 8899999875533211 00011 111
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccC--CCCceEEEeeecCcccCcHHHHHh----cCCCHHHHHHHHHHHHHHHHHHC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDY--TSGKVLTMEWVEGVKLNEQVAIES----QGLKVLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~~LvmE~~~G~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lh~~ 287 (464)
|.. ....+...+ .+...+..+ ....+++++++.|+.+.+...... ........+..++..++.++|..
T Consensus 47 e~~----~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~ 120 (384)
T COG0515 47 EIQ----ILASLNHPP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120 (384)
T ss_pred HHH----HHHHccCCc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 222 111111121 122222211 222589999999999985533321 22233445567777789999999
Q ss_pred CcccCCCCCcceEEccCC-cEEEEecCCCCcCCHHHHH-----HHHHHHHHHHhcCHHHHHHHHHHc---CCCCCCCCcc
Q 012411 288 GYFHADPHPGNLLATPEG-KLAFLDFGMMSETPEEARF-----AIIGHVVHMVNRDYEAMARDYYAL---DFLSPDVDVT 358 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g-~i~l~DFGl~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~D~~ 358 (464)
|++|||+||.||+++..+ .++++|||.+..+...... ..........+..|+.+ .. +......|+|
T Consensus 121 ~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~-----~~~~~~~~~~~~D~~ 195 (384)
T COG0515 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVL-----LGLSLAYASSSSDIW 195 (384)
T ss_pred CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHh-----cCCCCCCCCchHhHH
Confidence 999999999999999888 7999999998865443211 01111222333344433 22 4567889999
Q ss_pred hHHHHHHHHHHHh
Q 012411 359 PIVPALRNFFDDA 371 (464)
Q Consensus 359 sl~~~l~~~~~~~ 371 (464)
++|+.+++++...
T Consensus 196 s~g~~~~~~~~~~ 208 (384)
T COG0515 196 SLGITLYELLTGL 208 (384)
T ss_pred HHHHHHHHHHhCC
Confidence 9998888877644
No 437
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.29 E-value=5.3e-11 Score=104.55 Aligned_cols=147 Identities=18% Similarity=0.249 Sum_probs=103.5
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
-+++-+|+-|.|+++.. +|+..+||...+..-+ ||-+..-+.. .+ ..
T Consensus 12 l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YR-----------------------HP~LD~kLtr--~R------t~ 58 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGSF--SGEAAIIKERFSKRYR-----------------------HPALDQKLTR--KR------TK 58 (229)
T ss_pred ceeeeccceeeEeeecc--CCceeEEeeccccccc-----------------------chHHHHHHHH--HH------HH
Confidence 47899999999999998 6999999987554222 3322221111 11 34
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecC-cccCcHHHHHhc--CCCHH-HHHHHHHHHHHHHHHHCC
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG-VKLNEQVAIESQ--GLKVL-DLVNTGIQCSLRQLLEYG 288 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G-~~L~~~~~~~~~--~~~~~-~~~~~~i~~~l~~lh~~g 288 (464)
+|++.+.+++.. .+.+|.+|........|.|||++| .++.+.....-. ..+.. .-....+-..+.-||..+
T Consensus 59 ~Ear~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd 133 (229)
T KOG3087|consen 59 QEARLLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND 133 (229)
T ss_pred HHHHHHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC
Confidence 577777777764 688999998777888999999999 344444322211 12222 233455666788999999
Q ss_pred cccCCCCCcceEEccCCc---EEEEecCCCCc
Q 012411 289 YFHADPHPGNLLATPEGK---LAFLDFGMMSE 317 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~---i~l~DFGl~~~ 317 (464)
++|+|+..+||++.++|. +.++|||++..
T Consensus 134 iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 134 IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eecccccccceEEecCCCcCceEEEeecchhc
Confidence 999999999999987663 58999998754
No 438
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=3.6e-12 Score=135.24 Aligned_cols=193 Identities=17% Similarity=0.091 Sum_probs=117.0
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEec----CChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQR----PGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQE 208 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~----p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~E 208 (464)
...+|+|++|.|+.+......+..+.|..+ +.... ...-..+......-..+.|+++.+.+.-+.+.
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~-----~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~---- 393 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESE-----RKYNYNITSEFCIGSSLSHPNIIETLDIVQEI---- 393 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccH-----HHHhhhhhhheeecccccCCchhhhHHHHhhc----
Confidence 467999999988888876555556666543 22111 11111122222222334567765554433221
Q ss_pred hcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHH-hcCCCHHHHHHHHHHHHHHHHHHC
Q 012411 209 LNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIE-SQGLKVLDLVNTGIQCSLRQLLEY 287 (464)
Q Consensus 209 ld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~ 287 (464)
....-+||||++ +|....... ............|+..+++|+|..
T Consensus 394 ---------------------------------~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~ 439 (601)
T KOG0590|consen 394 ---------------------------------DGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM 439 (601)
T ss_pred ---------------------------------ccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc
Confidence 011122999999 888764433 344556667788999999999999
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHH-cCCCCCCCCcchHHHHHHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYA-LDFLSPDVDVTPIVPALRN 366 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~D~~sl~~~l~~ 366 (464)
|+-|||+||+|++++.+|.++++|||.+....-........ ... ..+...+++++++. ..+....+|+|+.+..+..
T Consensus 440 GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~-~~g-~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~ 517 (601)
T KOG0590|consen 440 GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHE-SSG-IVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYIC 517 (601)
T ss_pred CceeccCccccEEEecCCceEEeecCcceeeccCcchhhhh-hcC-cccCCcCcCcccccccccCcchhhhhhccceEEE
Confidence 99999999999999999999999999987643221111000 001 11222233344332 2344566899999887766
Q ss_pred HHHH
Q 012411 367 FFDD 370 (464)
Q Consensus 367 ~~~~ 370 (464)
|..+
T Consensus 518 m~~~ 521 (601)
T KOG0590|consen 518 MILG 521 (601)
T ss_pred EecC
Confidence 6654
No 439
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.21 E-value=1.5e-11 Score=131.66 Aligned_cols=172 Identities=17% Similarity=0.118 Sum_probs=107.2
Q ss_pred HHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH----HHHHHHHH----HH-HHHhcCHHHHHHHHHHc
Q 012411 278 QCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE----ARFAIIGH----VV-HMVNRDYEAMARDYYAL 348 (464)
Q Consensus 278 ~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~----~~~~~~~~----~~-~~~~~~~~~~~~~~~~~ 348 (464)
..+++|+|+.||+|||+||.|++|+.-|++|+.|||+.+..-.. .....+.- +. --..+.|+++++++.-+
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr 232 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR 232 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh
Confidence 45899999999999999999999999999999999987643211 11111111 11 11345677887776655
Q ss_pred CCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhh---CCCCCChHHHHHHHHHHHHHHhhcccCCCCC
Q 012411 349 DFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQ---YPFNVPAYYALILRSLTVLEGLALYADPNFK 425 (464)
Q Consensus 349 g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~ 425 (464)
-.++..+|+|++|.++++++-+.. ++.+..-.+++..+...... -...+|++...++..++.---.++..-+ -.
T Consensus 233 qgygkpvdwwamGiIlyeFLVgcv--pffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~-ga 309 (1205)
T KOG0606|consen 233 QGYGKPVDWWAMGIILYEFLVGCV--PFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG-GA 309 (1205)
T ss_pred hccCCCccHHHHHHHHHHHheeee--eccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccc-hh
Confidence 555889999999999999987443 33333333333322222111 2455889988888888654334433322 33
Q ss_pred hHHhhhHHHHHHhcCCCCHHHHHHHHHHhc
Q 012411 426 VLAASYPYFAKRLLTDPNPYLRDALVELLF 455 (464)
Q Consensus 426 ~~~~~~p~~~~~l~~~~~p~~r~~~~~~l~ 455 (464)
+...+++|+. ..+.+-.+|+-+.-+..
T Consensus 310 ~evk~h~ff~---~LDw~~llRqkaefvpq 336 (1205)
T KOG0606|consen 310 LEVKQHGFFQ---LLDWKSLLRQKAEFVPQ 336 (1205)
T ss_pred hhhhhcccee---ecccchhhhhhcccccc
Confidence 3334666653 22455556665554443
No 440
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.20 E-value=8.2e-11 Score=109.58 Aligned_cols=144 Identities=21% Similarity=0.249 Sum_probs=87.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+|++.|..+.||++... +|+.+++|+.+++... ....++..
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--------------------------------------~~~~~~~~ 44 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--------------------------------------PSAHDVAR 44 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--------------------------------------cccccHHH
Confidence 78999999999999986 5789999997644110 00112344
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCC-----CceEEEeeecCcccCcHHH----------------------HHhcC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTS-----GKVLTMEWVEGVKLNEQVA----------------------IESQG 266 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~-----~~~LvmE~~~G~~L~~~~~----------------------~~~~~ 266 (464)
|+..+..+.+. .+.+|+++..... ..+++|||++|.++.+... +....
T Consensus 45 E~~~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 119 (223)
T cd05154 45 EYRVLRALAGT-----GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVD 119 (223)
T ss_pred HHHHHHHhhCC-----CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 55555544432 4567776654433 4589999999988865321 00000
Q ss_pred -----CC--------HHHHHHH--------------HHHHHHHHHH-------HCCcccCCCCCcceEEcc--CCcEEEE
Q 012411 267 -----LK--------VLDLVNT--------------GIQCSLRQLL-------EYGYFHADPHPGNLLATP--EGKLAFL 310 (464)
Q Consensus 267 -----~~--------~~~~~~~--------------~i~~~l~~lh-------~~gi~H~Dlkp~Nili~~--~g~i~l~ 310 (464)
.. ....+.. .+...+.++. ..+++|+|+||+||++++ ++.+.|+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iI 199 (223)
T cd05154 120 PAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVL 199 (223)
T ss_pred hhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEE
Confidence 00 0000000 0011122221 367899999999999998 5678999
Q ss_pred ecCCCCcCCHH
Q 012411 311 DFGMMSETPEE 321 (464)
Q Consensus 311 DFGl~~~l~~~ 321 (464)
||+.++.-++.
T Consensus 200 D~e~~~~g~~~ 210 (223)
T cd05154 200 DWELATLGDPL 210 (223)
T ss_pred eccccccCChH
Confidence 99998875543
No 441
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.18 E-value=9.4e-11 Score=105.25 Aligned_cols=98 Identities=21% Similarity=0.170 Sum_probs=69.2
Q ss_pred cccCcHHHHHhcCCCHH--HHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHH
Q 012411 254 VKLNEQVAIESQGLKVL--DLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVV 331 (464)
Q Consensus 254 ~~L~~~~~~~~~~~~~~--~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~ 331 (464)
|+|.++......+++.. ..+..++..|+.|+|+.| ||+||+++.++.+++ ||++........
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~-------- 64 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQS-------- 64 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccC--------
Confidence 35555544323334443 345577888999999999 999999999999999 999887654321
Q ss_pred HHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 332 HMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 332 ~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
.+++.+++++....+..++++|+||+|+.+++++++
T Consensus 65 ---~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg 100 (176)
T smart00750 65 ---RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDY 100 (176)
T ss_pred ---CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhC
Confidence 122334444444445567899999999999999984
No 442
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.10 E-value=1.6e-10 Score=111.65 Aligned_cols=172 Identities=14% Similarity=0.094 Sum_probs=109.6
Q ss_pred CCceEEEeeecCcccCcHHHHHh-------cCCCHHHH--HHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEec
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIES-------QGLKVLDL--VNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDF 312 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~-------~~~~~~~~--~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DF 312 (464)
...+....+..-+.|..+..+.+ +.....++ +..|+.+++.|+|++|++|.||-..|.+|++.-++||+|=
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccc
Confidence 34455556665566766544322 11233333 3467778999999999999999999999999999999999
Q ss_pred CCCCcCCHHHHHHHHHH-HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Q 012411 313 GMMSETPEEARFAIIGH-VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTIVDGLGAV 391 (464)
Q Consensus 313 Gl~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 391 (464)
.+++.+-+.....+.+. -.-+-+..+|.++...| +...|+|+||..+||+++. ...|..+++--++-.-+.+.
T Consensus 441 aLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~y-----ssasDvWsfGVllWELmtl-g~~PyaeIDPfEm~~ylkdG 514 (563)
T KOG1024|consen 441 ALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHY-----SSASDVWSFGVLLWELMTL-GKLPYAEIDPFEMEHYLKDG 514 (563)
T ss_pred hhccccCcccccccCCCCCCcccccCHHHHhhhhh-----cchhhhHHHHHHHHHHHhc-CCCCccccCHHHHHHHHhcc
Confidence 99887644332211100 00112334566655555 7889999999999999983 45677666644433323222
Q ss_pred Hh-hCCCCCChHHHHHHHHHHHHHHhhcccCCCCCh
Q 012411 392 LY-QYPFNVPAYYALILRSLTVLEGLALYADPNFKV 426 (464)
Q Consensus 392 ~~-~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~ 426 (464)
-+ ..|++.|.++..++- .|=.++|+-++
T Consensus 515 yRlaQP~NCPDeLf~vMa-------cCWallpeeRP 543 (563)
T KOG1024|consen 515 YRLAQPFNCPDELFTVMA-------CCWALLPEERP 543 (563)
T ss_pred ceecCCCCCcHHHHHHHH-------HHHhcCcccCC
Confidence 22 468889988654443 23456665444
No 443
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.09 E-value=3.7e-10 Score=111.99 Aligned_cols=144 Identities=21% Similarity=0.221 Sum_probs=87.0
Q ss_pred HHhhhc---ccCCcccccceecEEEEEEEccCCcEEEEEEecCC--hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHH
Q 012411 124 LDSIFS---SISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG--IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALI 198 (464)
Q Consensus 124 ~~~~f~---~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~--~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~ 198 (464)
+.+.|. +.-...||=|-|++||+|++..+.+-||+||++.. ..+..-.++.+|+.+..--. .......+++++
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp--~~~~~~~VV~Ll 148 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDP--NDPGKKCVVQLL 148 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCC--CCCCCceeeeee
Confidence 444554 23347899999999999999988899999999843 11222223333333221000 000011233333
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHH-HhcC--CCHHHHHHH
Q 012411 199 DEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQG--LKVLDLVNT 275 (464)
Q Consensus 199 ~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~--~~~~~~~~~ 275 (464)
+.|.-. .. -..+.++|.|++ |..|..++.. .-.| +...+-+..
T Consensus 149 D~Fkhs----------------------Gp-----------NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~ 194 (590)
T KOG1290|consen 149 DHFKHS----------------------GP-----------NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICR 194 (590)
T ss_pred ccceec----------------------CC-----------CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHH
Confidence 322210 00 013458999998 6566665432 2233 344556778
Q ss_pred HHHHHHHHHHH-CCcccCCCCCcceEEcc
Q 012411 276 GIQCSLRQLLE-YGYFHADPHPGNLLATP 303 (464)
Q Consensus 276 ~i~~~l~~lh~-~gi~H~Dlkp~Nili~~ 303 (464)
|++.+|.|||+ .||||-||||+|||+..
T Consensus 195 qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 195 QVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 89999999996 79999999999999963
No 444
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.07 E-value=2.3e-11 Score=130.47 Aligned_cols=102 Identities=18% Similarity=0.175 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCc--CCHHHHHHHHHHHH----HHHhcCHHHHH
Q 012411 269 VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSE--TPEEARFAIIGHVV----HMVNRDYEAMA 342 (464)
Q Consensus 269 ~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~--l~~~~~~~~~~~~~----~~~~~~~~~~~ 342 (464)
.++.+..|+..++.++|+.||.|+|||.+||||+.=+-+.|.||..-+. ++++....+.-.+- -.++-.||+..
T Consensus 121 EKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv 200 (1431)
T KOG1240|consen 121 EKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFV 200 (1431)
T ss_pred HHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhh
Confidence 4557788999999999999999999999999999999999999987653 33322111110000 01233455554
Q ss_pred HHH------HHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 343 RDY------YALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 343 ~~~------~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
... ..-+.+.++.|+.|+||.+.|++..
T Consensus 201 ~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~E 234 (1431)
T KOG1240|consen 201 SALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLE 234 (1431)
T ss_pred ccccccccCCcccccChhhhhhhhhHHHHHHHhc
Confidence 422 1112357889999999999999973
No 445
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.07 E-value=1.2e-09 Score=104.69 Aligned_cols=102 Identities=16% Similarity=0.102 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEecee--eccC-----CCCceEEEeeecCc-ccCcHHHHH-hcCC--CHHHHHHHHHHH
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDI--FWDY-----TSGKVLTMEWVEGV-KLNEQVAIE-SQGL--KVLDLVNTGIQC 279 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v--~~~~-----~~~~~LvmE~~~G~-~L~~~~~~~-~~~~--~~~~~~~~~i~~ 279 (464)
+.+|.+++.++.+. .+.+|.+ |.+. ....+||||+++|. +|.++.... .... .....+...+..
T Consensus 75 a~rE~~~l~~L~~~-----GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~ 149 (268)
T PRK15123 75 ADREWRAIHRLHEV-----GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVAT 149 (268)
T ss_pred HHHHHHHHHHHHHc-----CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 44567777777763 5667776 4332 23468999999985 677764311 1111 233345566777
Q ss_pred HHHHHHHCCcccCCCCCcceEEcc-------CCcEEEEecCCCCc
Q 012411 280 SLRQLLEYGYFHADPHPGNLLATP-------EGKLAFLDFGMMSE 317 (464)
Q Consensus 280 ~l~~lh~~gi~H~Dlkp~Nili~~-------~g~i~l~DFGl~~~ 317 (464)
.+..||..|++|+|++|+|||++. ++++.||||+.+..
T Consensus 150 ~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 150 MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 899999999999999999999975 46799999998853
No 446
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.98 E-value=9.1e-10 Score=112.76 Aligned_cols=162 Identities=15% Similarity=0.146 Sum_probs=114.4
Q ss_pred CCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccC
Q 012411 227 DKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPE 304 (464)
Q Consensus 227 ~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~ 304 (464)
..+.+.-+..-.+..++.+++++|+.|+.+....... ...+ ....+..-+..+++++|..|++|+|+|++||+++.+
T Consensus 55 ~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~ 133 (612)
T KOG0603|consen 55 NTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE 133 (612)
T ss_pred CCCceeeeeeeeccccchhHhhhhcccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc
Confidence 3566666666667778899999999998876542211 1111 222333445568999999999999999999999999
Q ss_pred CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCCCCcCcHHHH
Q 012411 305 GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSSVSELNFKTI 384 (464)
Q Consensus 305 g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~~~~~~~~~~ 384 (464)
|.+++.|||+.+..-+.... | ++++++++++.. |. ...+|.|++|..+.+++++. .++..
T Consensus 134 Ghi~~tdfglske~v~~~~~--c--------gt~eymApEI~~-gh-~~a~D~ws~gvl~felltg~--~pf~~------ 193 (612)
T KOG0603|consen 134 GHIKLTDFGLSKEAVKEKIA--C--------GTYEYRAPEIIN-GH-LSAADWWSFGVLAFELLTGT--LPFGG------ 193 (612)
T ss_pred CccccCCchhhhHhHhhhhc--c--------cchhhhhhHhhh-cc-CCcccchhhhhhHHHHhhCC--CCCch------
Confidence 99999999999876544332 3 456777777776 43 56789999999999999843 33332
Q ss_pred HHHHHHHHhhCCCCCChHHHHHHHHHH
Q 012411 385 VDGLGAVLYQYPFNVPAYYALILRSLT 411 (464)
Q Consensus 385 ~~~l~~~~~~~~~~~p~~~~~l~r~l~ 411 (464)
++.+.+..-.+.+|.++....+++.
T Consensus 194 --~~~~~Il~~~~~~p~~l~~~a~~~~ 218 (612)
T KOG0603|consen 194 --DTMKRILKAELEMPRELSAEARSLF 218 (612)
T ss_pred --HHHHHHhhhccCCchhhhHHHHHHH
Confidence 2233333345667888877777764
No 447
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=7e-10 Score=107.60 Aligned_cols=269 Identities=17% Similarity=0.159 Sum_probs=148.7
Q ss_pred CcccccceecEEEEEEEccCCc-----------------------------------EEEEEEecCChHHHHHHHHHHHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQ-----------------------------------IVAVKVQRPGIEEAIGLDFYLIR 177 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~-----------------------------------~VAVKv~~p~~~~~~~~d~~~l~ 177 (464)
.++||+|+-+.||.|+...+|. +.|||..-.- .. -..|..+|+
T Consensus 162 G~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~-~~-~s~~~~iL~ 239 (598)
T KOG4158|consen 162 GEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNF-EH-DSGDAHILK 239 (598)
T ss_pred cchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhccc-cc-CCchHHHHH
Confidence 3789999999999998864221 2344433211 11 145667777
Q ss_pred HHHHHHHh--------------ch--h------cccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEece
Q 012411 178 GVGFLINK--------------YV--D------IITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPD 235 (464)
Q Consensus 178 ~~~~~~~~--------------~~--~------~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~ 235 (464)
.+...+-- +. + ..|||++.+...|.+++. +...-.. ..+...--+
T Consensus 240 sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~----------~lPda~~---~YPdalp~R 306 (598)
T KOG4158|consen 240 SMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVK----------VLPDAIE---RYPDALPAR 306 (598)
T ss_pred HhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhc----------cCCchhh---hCcccccce
Confidence 76544310 11 1 258999998888766532 2111111 112111112
Q ss_pred eeccC---CCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEc--cCC--cEE
Q 012411 236 IFWDY---TSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLAT--PEG--KLA 308 (464)
Q Consensus 236 v~~~~---~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~--~~g--~i~ 308 (464)
.|++- ....|+||...+. +|.++.-.+........++..|+..++.|+|++|+.|||+|..|||+. +|+ .++
T Consensus 307 ~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LV 385 (598)
T KOG4158|consen 307 WYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLV 385 (598)
T ss_pred ecccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEE
Confidence 22221 2345899988765 677664444444445566677888899999999999999999999995 444 489
Q ss_pred EEecCCCCcCCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHc--C---CC-CCCCCcchHHHHHHHHHHH---hccCCCCc
Q 012411 309 FLDFGMMSETPEE-ARFAIIGHVVHMVNRDYEAMARDYYAL--D---FL-SPDVDVTPIVPALRNFFDD---ALNSSVSE 378 (464)
Q Consensus 309 l~DFGl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--g---~~-~~~~D~~sl~~~l~~~~~~---~~~~~~~~ 378 (464)
+.|||++---+.. .+..+..-.. -.-++...+++++... | ++ -.+.|.|+.|..-||++.. +++..--.
T Consensus 386 vaDFGCcLAd~~hGlqlpy~S~~V-d~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~ 464 (598)
T KOG4158|consen 386 VADFGCCLADDNHGLQLPYESDEV-DLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML 464 (598)
T ss_pred Ecccceeeeccccccccccccccc-cCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe
Confidence 9999987432110 1100000000 0012233344443211 1 11 2367999999999999962 22211111
Q ss_pred CcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCChHH
Q 012411 379 LNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFKVLA 428 (464)
Q Consensus 379 ~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~~~~ 428 (464)
.+....- ...+...+-.+||....++..+ +.-||+.+++.
T Consensus 465 L~~r~Yq---e~qLPalp~~vpp~~rqlV~~l-------L~r~pskRvsp 504 (598)
T KOG4158|consen 465 LDTRTYQ---ESQLPALPSRVPPVARQLVFDL-------LKRDPSKRVSP 504 (598)
T ss_pred echhhhh---hhhCCCCcccCChHHHHHHHHH-------hcCCccccCCc
Confidence 1111100 1123345677888888888887 45566655544
No 448
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.88 E-value=8.1e-08 Score=93.33 Aligned_cols=223 Identities=18% Similarity=0.246 Sum_probs=131.5
Q ss_pred hcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcc----cCCHHHHHHHHHH
Q 012411 128 FSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDII----TTDVVALIDEFAS 203 (464)
Q Consensus 128 f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~----~~~i~~~~~~~~~ 203 (464)
+..++ -+|..|.-+.||.|+-. +|..+|||+.+-.+.---.+|-. +..-+.++ ..|+..++..+.+
T Consensus 145 i~~in-GCiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRY--------V~GEfRFRhgyck~NPRKMVk~WAE 214 (520)
T KOG2270|consen 145 IVEIN-GCISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRY--------VSGEFRFRHGYCKHNPRKMVKTWAE 214 (520)
T ss_pred eeecc-cccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhh--------ccceeeeecccccCCcHHHHHHHHH
Confidence 33444 57889999999999987 99999999987654322122211 11111122 3588888887775
Q ss_pred HHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCC--HHHHHHHHHHHHH
Q 012411 204 RVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLK--VLDLVNTGIQCSL 281 (464)
Q Consensus 204 ~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~--~~~~~~~~i~~~l 281 (464)
. |.+|+.++... .|.+|+++ +-..++|||+|+.+.... ...+....+. ...-+-.++...+
T Consensus 215 K---------E~RNLkRl~~a-----GIP~PePI--lLk~hVLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~M 277 (520)
T KOG2270|consen 215 K---------EMRNLKRLNNA-----GIPCPEPI--LLKNHVLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIM 277 (520)
T ss_pred H---------HHHHHHHHHhc-----CCCCCCce--eeecceEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHH
Confidence 4 78898888763 46667665 347889999999642221 1112222332 2222222222233
Q ss_pred H-HHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchH
Q 012411 282 R-QLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPI 360 (464)
Q Consensus 282 ~-~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl 360 (464)
. ..+.++++|+||.--|+|+ .+|++.+||-+.+...+......+ +..|...+..-+..+|+..-
T Consensus 278 R~lY~~c~LVHADLSEfN~Ly-hdG~lyiIDVSQSVE~DHP~aldF-------LRmDc~NVn~FF~r~gv~v~------- 342 (520)
T KOG2270|consen 278 RRLYQKCRLVHADLSEFNLLY-HDGKLYIIDVSQSVEHDHPHALDF-------LRMDCNNVNDFFRRLGVAVM------- 342 (520)
T ss_pred HHHHHHhceeccchhhhhheE-ECCEEEEEEccccccCCChhHHHH-------HHHHHHHHHHHHHHcCCeee-------
Confidence 3 3457899999999999998 889999999999888765533222 22344444444555554211
Q ss_pred HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHhh
Q 012411 361 VPALRNFFDDALNSSVSELNFKTIVDGLGAVLYQ 394 (464)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 394 (464)
.+.++|.-..+......++...++.+..+...
T Consensus 343 --t~r~LFefI~d~~i~~~nmd~~l~~l~~~~~~ 374 (520)
T KOG2270|consen 343 --TVRELFEFITDPTITLENMDAYLEELKAIIIS 374 (520)
T ss_pred --cHHHHHHHhhccccchhhHHHHHHHHHHHHhc
Confidence 12333333334444555555555555544443
No 449
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.84 E-value=1.2e-08 Score=94.50 Aligned_cols=104 Identities=18% Similarity=0.274 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCC------CceEEEeeecCc-ccCcHHHHH-hcCCCHHHHHHHHHHHHHH
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTS------GKVLTMEWVEGV-KLNEQVAIE-SQGLKVLDLVNTGIQCSLR 282 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~------~~~LvmE~~~G~-~L~~~~~~~-~~~~~~~~~~~~~i~~~l~ 282 (464)
..+|.+++.++.+ ..|.+|+++.-... ..+|+||+++|. +|.+..... .........+...+...+.
T Consensus 58 a~~E~~~~~~L~~-----~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 58 AKREWRNLQRLRE-----AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIA 132 (206)
T ss_pred HHHHHHHHHHHHH-----cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHH
Confidence 4456677777775 35677776553222 348999999984 677664321 1222334455567777899
Q ss_pred HHHHCCcccCCCCCcceEEccCC---cEEEEecCCCCcCC
Q 012411 283 QLLEYGYFHADPHPGNLLATPEG---KLAFLDFGMMSETP 319 (464)
Q Consensus 283 ~lh~~gi~H~Dlkp~Nili~~~g---~i~l~DFGl~~~l~ 319 (464)
.||..|++|+|++|+|||++.++ ++.+|||+-+....
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999999999999999999887 89999999887654
No 450
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.73 E-value=1.5e-07 Score=88.44 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=28.8
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
..++|+|+||+||+++++| +.++||+.++.=++.
T Consensus 153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~Gdp~ 186 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGKG-TYWIDLGDFGYGNPL 186 (226)
T ss_pred CceEecCCCCCcEEEcCCC-cEEEechhcCcCCHH
Confidence 3578999999999999888 999999998765443
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=98.69 E-value=5.8e-09 Score=104.97 Aligned_cols=120 Identities=18% Similarity=0.246 Sum_probs=90.4
Q ss_pred CceEEEeeecCcccCcHHHHHhcCCC----HHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcC
Q 012411 243 GKVLTMEWVEGVKLNEQVAIESQGLK----VLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 243 ~~~LvmE~~~G~~L~~~~~~~~~~~~----~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
..++.|++|+-.+|.+++..+..+.. .......++..+++| +|.+|+|+||.||+...+++++|.|||++...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 35799999999999998654433322 222334445557777 99999999999999999999999999999876
Q ss_pred CHHH-----HHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHH
Q 012411 319 PEEA-----RFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDD 370 (464)
Q Consensus 319 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~ 370 (464)
.... ...-+.-+....+.+||.+...-| +.++|+++||..++|++..
T Consensus 407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y-----~~kvdIyaLGlil~EL~~~ 458 (516)
T KOG1033|consen 407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQQY-----SEKVDIYALGLILAELLIQ 458 (516)
T ss_pred ccCCcccchhhhhhhcccccccCCHHHHhhhhh-----hhhcchhhHHHHHHHHHHH
Confidence 5443 122333344567778999876665 7899999999999999874
No 452
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.66 E-value=2.4e-07 Score=86.65 Aligned_cols=35 Identities=29% Similarity=0.524 Sum_probs=24.9
Q ss_pred CCcccCCCCCcceEEc-cCCcEEEEecCCCCcCCHH
Q 012411 287 YGYFHADPHPGNLLAT-PEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~-~~g~i~l~DFGl~~~l~~~ 321 (464)
.+++|+|+||+||+++ .++++.|+||+.++.-++.
T Consensus 166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~ 201 (239)
T PF01636_consen 166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPA 201 (239)
T ss_dssp EEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETH
T ss_pred cEEEEeccccccceeeeccceeEEEecccceECCHH
Confidence 5699999999999999 6777899999998765443
No 453
>PRK10593 hypothetical protein; Provisional
Probab=98.65 E-value=1.4e-06 Score=85.27 Aligned_cols=93 Identities=16% Similarity=0.164 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhchh
Q 012411 110 AEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-IEEAIGLDFYLIRGVGFLINKYVD 188 (464)
Q Consensus 110 ~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-~~~~~~~d~~~l~~~~~~~~~~~~ 188 (464)
+.+.+.+.+.+|..+.++ ++||.|.+++||+.... +| .+++|+.+.. ...
T Consensus 2 ~~~~~~~~~~~~~~~~~~------~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~~~~~--------------------- 52 (297)
T PRK10593 2 EQLRAELSHLLGEKLSRV------ECISEQPYAALWALYDS-QG-NPMPLMARSFSTPG--------------------- 52 (297)
T ss_pred hHHHHHHHHHhchhhhee------eecCCccceeEEEEEcC-CC-CEEEEEecccccch---------------------
Confidence 345667777777654444 89999999999999764 44 5888886531 111
Q ss_pred cccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccC-----CCCceEEEeeecCccc
Q 012411 189 IITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDY-----TSGKVLTMEWVEGVKL 256 (464)
Q Consensus 189 ~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-----~~~~~LvmE~~~G~~L 256 (464)
.+..|+.++..+.+ ...+.||+|+... .+..+||||+++|.++
T Consensus 53 ---------------------~~~~Ea~~L~~L~~----~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 53 ---------------------VAQQEAWKLSMLAR----SGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred ---------------------HHHHHHHHHHHHcc----CCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 13446666666643 2358899999522 3557999999999876
No 454
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.64 E-value=6e-08 Score=92.81 Aligned_cols=157 Identities=18% Similarity=0.205 Sum_probs=103.7
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||-|.-+-||.+-+. .|++.++|+-|-+ ..-.+.++.-.....+.....+..+..+ .-.+
T Consensus 98 nqIGVGKESDIY~v~d~-~G~~~~lK~HRLG-----RtSFR~Vk~kRDY~r~r~~~sWlyLSRl------------aa~k 159 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADE-EGNPLILKLHRLG-----RTSFRNVKNKRDYLRKRKSGSWLYLSRL------------AATK 159 (465)
T ss_pred cccccccccceEEEecC-CCCchhHHHHhhh-----hhhHHHhhhhhhhHhcCCccchhhhHHH------------HHHH
Confidence 56999999999999987 8999999988755 2222333322222211111111112111 1122
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
|-..+..+.+ ..+.||+++.. +.+++|||+++|.+|.+.... .++..++...+ ..+.-+-.+|+||+|
T Consensus 160 EfafmkaL~e-----~gfpVPkpiD~--~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm-~~Iv~la~~GlIHgD 227 (465)
T KOG2268|consen 160 EFAFMKALYE-----RGFPVPKPIDH--NRHCVVMELVDGYPLRQVRHV----EDPPTLYDDLM-GLIVRLANHGLIHGD 227 (465)
T ss_pred HHHHHHHHHH-----cCCCCCCcccc--cceeeHHHhhcccceeeeeec----CChHHHHHHHH-HHHHHHHHcCceecc
Confidence 3333444433 35678998864 788999999999999876332 24445554444 345567899999999
Q ss_pred CCCcceEEccCCcEEEEecCCCCcCCH
Q 012411 294 PHPGNLLATPEGKLAFLDFGMMSETPE 320 (464)
Q Consensus 294 lkp~Nili~~~g~i~l~DFGl~~~l~~ 320 (464)
-.--||++.+++++++|||-.+...+.
T Consensus 228 FNEFNimv~dd~~i~vIDFPQmvS~sh 254 (465)
T KOG2268|consen 228 FNEFNIMVKDDDKIVVIDFPQMVSTSH 254 (465)
T ss_pred cchheeEEecCCCEEEeechHhhccCC
Confidence 999999999999999999987766544
No 455
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.59 E-value=1.4e-06 Score=82.67 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=29.6
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
..++|+|++|+|||+++++.+.|+||+.++.-++.
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gdp~ 197 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVADRY 197 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccccccHH
Confidence 45899999999999998777889999998865543
No 456
>PRK05231 homoserine kinase; Provisional
Probab=98.58 E-value=1.4e-06 Score=86.18 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=27.7
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
.|++|+|+||+||+++.+....++||+.++.-.
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~ 219 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACNDK 219 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccCCc
Confidence 589999999999999855545899999987643
No 457
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.51 E-value=1.5e-06 Score=82.11 Aligned_cols=35 Identities=34% Similarity=0.514 Sum_probs=28.4
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
.+++|+|+||+|++++.++-..++||+.+..-++.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gDp~ 198 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGDPA 198 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCcCChH
Confidence 45899999999999976554679999998765543
No 458
>PRK09902 hypothetical protein; Provisional
Probab=98.45 E-value=3.7e-06 Score=77.01 Aligned_cols=148 Identities=15% Similarity=0.163 Sum_probs=97.7
Q ss_pred cCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 131 ISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 131 ~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
+|+---|.|+-+.|++-.. .|..+-||.+....... ..+|+. +--
T Consensus 21 ve~pN~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s--------------------~r~P~g-------------~pt 65 (216)
T PRK09902 21 VEEPNYRRNGMSGVQCVER--NGKKLYVKRMTHHLFHS--------------------VRYPFG-------------RPT 65 (216)
T ss_pred ecCCCcCCCCcceEEEEEe--CCcEEEEEeccCccccc--------------------ccCCCC-------------chH
Confidence 4433356799999999877 57789999886443221 112221 112
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccC------CCCceEEEeeecC-cccCcHHHHHhc---CCCHHHHHHHHHHHH
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDY------TSGKVLTMEWVEG-VKLNEQVAIESQ---GLKVLDLVNTGIQCS 280 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~------~~~~~LvmE~~~G-~~L~~~~~~~~~---~~~~~~~~~~~i~~~ 280 (464)
|.+|-.++.++.+. .+.+|++...- .-..+||+|-++| .+|.++...... +......+...+...
T Consensus 66 f~rE~~~L~~L~~~-----GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ 140 (216)
T PRK09902 66 IVREVAVIKELERA-----GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALA 140 (216)
T ss_pred HHHHHHHHHHHHHc-----CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHH
Confidence 44566677777663 45577765321 1235899998876 466665322111 222334555667778
Q ss_pred HHHHHHCCcccCCCCCcceEEccCCc--EEEEecCCCCcC
Q 012411 281 LRQLLEYGYFHADPHPGNLLATPEGK--LAFLDFGMMSET 318 (464)
Q Consensus 281 l~~lh~~gi~H~Dlkp~Nili~~~g~--i~l~DFGl~~~l 318 (464)
+..+|..|+.|+|+-+.||+++.+|+ +++|||--++..
T Consensus 141 ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 141 FKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 99999999999999999999987777 999999877653
No 459
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.32 E-value=1e-05 Score=79.05 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=28.8
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
.+++|+|+||+|+++++++.+.|+||+.+..-.
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g~ 207 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACTDA 207 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcCch
Confidence 579999999999999987777999999887643
No 460
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.21 E-value=1.5e-05 Score=70.32 Aligned_cols=126 Identities=17% Similarity=0.242 Sum_probs=80.1
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQ 213 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~ 213 (464)
+.||.|..|.||.+.+. |.+||+|+++++.... . +..
T Consensus 28 ~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~r~-----------------------------------~------l~k 64 (201)
T COG2112 28 KELAKGTTSVVYLGEWR--GGEVALKVRRRDSPRR-----------------------------------N------LEK 64 (201)
T ss_pred hhhhcccccEEEEeecc--CceEEEEEecCCcchh-----------------------------------h------HHH
Confidence 56999999999999985 7799999998763321 1 222
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCC
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHAD 293 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~D 293 (464)
||+-++.+... -..|++|.. +..++.|||++|.+|.+.... .+...+ ...+.. .--|-..||-|..
T Consensus 65 EakiLeil~g~------~~~p~vy~y--g~~~i~me~i~G~~L~~~~~~----~~rk~l-~~vlE~-a~~LD~~GI~H~E 130 (201)
T COG2112 65 EAKILEILAGE------GVTPEVYFY--GEDFIRMEYIDGRPLGKLEIG----GDRKHL-LRVLEK-AYKLDRLGIEHGE 130 (201)
T ss_pred HHHHHHHhhhc------CCCceEEEe--chhhhhhhhhcCcchhhhhhc----ccHHHH-HHHHHH-HHHHHHhccchhh
Confidence 33333333221 235777654 555677999999998775321 122222 222222 2234567899988
Q ss_pred CC-CcceEEccCCcEEEEecCCCC
Q 012411 294 PH-PGNLLATPEGKLAFLDFGMMS 316 (464)
Q Consensus 294 lk-p~Nili~~~g~i~l~DFGl~~ 316 (464)
++ |...++..++++.||||-.++
T Consensus 131 l~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 131 LSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hcCCceeEEecCCcEEEEEccchh
Confidence 86 444444466699999998877
No 461
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.20 E-value=3e-05 Score=78.43 Aligned_cols=87 Identities=21% Similarity=0.206 Sum_probs=55.1
Q ss_pred CCcccccceecEEEEEEEccCC-cEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhc
Q 012411 132 SPSPIAAASLGQVYKAQLKYSG-QIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELN 210 (464)
Q Consensus 132 ~~~pig~Gs~gqV~~a~~~~~g-~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld 210 (464)
..+++|.|.+..||++.+. +| +.|+||...|..+..-. . + .... ++
T Consensus 30 ~~~elggGn~N~VyrV~~~-~g~~svIVKqa~p~~r~~g~-~-------------w----pl~~--------eR------ 76 (401)
T PRK09550 30 TAREIGDGNLNLVFRVSDT-EGGKSVIVKQALPYVRVVGE-S-------------W----PLTL--------DR------ 76 (401)
T ss_pred eeeEcCCCceEEEEEEEeC-CCCeEEEEEecCcccccccc-c-------------c----cccH--------HH------
Confidence 3478999999999999997 66 58999987654321000 0 0 0000 01
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcc
Q 012411 211 YVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVK 255 (464)
Q Consensus 211 ~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~ 255 (464)
...|+..+..+... ....+|+||.......++||||+++..
T Consensus 77 ~~~Eae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~ 117 (401)
T PRK09550 77 ARIEAEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHK 117 (401)
T ss_pred HHHHHHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCcc
Confidence 12244444444332 334699999887778899999998744
No 462
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=98.20 E-value=5.3e-05 Score=74.60 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=29.2
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
.+++|+|+|++|+++++++...++||+.+..-.
T Consensus 187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~~ 219 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACTDA 219 (307)
T ss_pred CccCCCCCCcCcEEEECCceEEEeecccccCcc
Confidence 789999999999999988877999999987643
No 463
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.14 E-value=2.1e-05 Score=74.12 Aligned_cols=34 Identities=18% Similarity=0.366 Sum_probs=29.0
Q ss_pred CCcccCCCCCcceEEcc-CCcEEEEecCCCCcCCH
Q 012411 287 YGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPE 320 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~-~g~i~l~DFGl~~~l~~ 320 (464)
.+++|+|++|+|||+++ ++.+.|+||-.++.-.+
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~ 204 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR 204 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch
Confidence 46999999999999997 57899999998876443
No 464
>PLN02756 S-methyl-5-thioribose kinase
Probab=98.10 E-value=8.1e-05 Score=75.12 Aligned_cols=108 Identities=15% Similarity=0.144 Sum_probs=62.4
Q ss_pred CCCCCHHHHHHHHHHH------hCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHH
Q 012411 104 LPTFPDAEAFSCIERE------LGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIR 177 (464)
Q Consensus 104 ~~p~~~~~~~~~i~~~------lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~ 177 (464)
..+++.+.+...+.+. +|.. +.....++||-|....||+... ++..|+||...|..+..-.
T Consensus 6 y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga------- 72 (418)
T PLN02756 6 FRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGE------- 72 (418)
T ss_pred cccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCc-------
Confidence 3455555555555443 3321 1223457899999999999886 4567999988766431100
Q ss_pred HHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecC
Q 012411 178 GVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG 253 (464)
Q Consensus 178 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G 253 (464)
...+. +-.+ ..|+..+....+ ...+.||+||.......+++|||+++
T Consensus 73 ----------~wpl~----~~R~-----------~~Ea~aL~~~~~----~~p~~VPkVy~~ded~~vlvME~L~~ 119 (418)
T PLN02756 73 ----------SWPMT----KERA-----------YFEATALREHGR----LCPDHVPEVYHFDRTMALIGMRYLEP 119 (418)
T ss_pred ----------cccCC----ccHH-----------HHHHHHHHHhhh----cCCCCCCeEEEECCCCCEEEEeecCC
Confidence 00000 0000 112222222222 23468999998877888999999988
No 465
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.08 E-value=3.8e-08 Score=104.81 Aligned_cols=125 Identities=18% Similarity=0.215 Sum_probs=89.8
Q ss_pred CCCceEEEeeecCcccCcHH-HHH--hcCCCHHHHHHHHHHHHHHHHH-HCCcccCCCCCcceEEccCC-cEEEEecCCC
Q 012411 241 TSGKVLTMEWVEGVKLNEQV-AIE--SQGLKVLDLVNTGIQCSLRQLL-EYGYFHADPHPGNLLATPEG-KLAFLDFGMM 315 (464)
Q Consensus 241 ~~~~~LvmE~~~G~~L~~~~-~~~--~~~~~~~~~~~~~i~~~l~~lh-~~gi~H~Dlkp~Nili~~~g-~i~l~DFGl~ 315 (464)
....++.+|+.+|+++.+.. ... .........+..++..++.|+| ..|+.|+|+||+|.+++..+ .+++.|||++
T Consensus 93 ~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 93 PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhh
Confidence 34568999999999998865 222 2234456677788888999999 99999999999999999999 9999999999
Q ss_pred CcCCH-HHHHHHHHHHHHHHhc-CHHHHHHHHHHc-CCCCCCCCcchHHHHHHHHHH
Q 012411 316 SETPE-EARFAIIGHVVHMVNR-DYEAMARDYYAL-DFLSPDVDVTPIVPALRNFFD 369 (464)
Q Consensus 316 ~~l~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-g~~~~~~D~~sl~~~l~~~~~ 369 (464)
..... +...... ....+ +++.+++++..- ++..+.+|+|+.|..+..+..
T Consensus 173 t~~~~~~g~~~~~----~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~ 225 (601)
T KOG0590|consen 173 TAYRNKNGAERSL----KDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLT 225 (601)
T ss_pred ccccccCCcceee----ecccCCCCCCCCcccccchhhcCCCccccccccccccccc
Confidence 87655 2111110 11112 444444444322 567889999999988876665
No 466
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=98.08 E-value=3.4e-05 Score=74.84 Aligned_cols=92 Identities=20% Similarity=0.318 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHhCCC--HHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhc
Q 012411 109 DAEAFSCIERELGLT--LDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKY 186 (464)
Q Consensus 109 ~~~~~~~i~~~lg~~--~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~ 186 (464)
|..+.+.|.+.+|.+ +..+ ++++.|.+.++|+.. .+++.+.||+........
T Consensus 2 w~~i~~~~~~~~~~~~~i~~~------~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~------------------ 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKITSI------EPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDM------------------ 55 (288)
T ss_dssp HHHHHHHHHHHHTS-----EE------EEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCH------------------
T ss_pred hHHHHHHHHHHhCCCCceeee------EecCCCChhheEEEE--CCCccEEEEecChhhHHH------------------
Confidence 567888899999876 3333 899999999999988 378999999987332222
Q ss_pred hhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeecc--CCCCceEEEeeecCc
Q 012411 187 VDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWD--YTSGKVLTMEWVEGV 254 (464)
Q Consensus 187 ~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~~~~LvmE~~~G~ 254 (464)
|..|+..++.+.+ ...+.+|+|+.- +.+..+|+|||++.+
T Consensus 56 ------------------------f~~Ea~gL~~L~~----~~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 ------------------------FEGEAEGLKALAE----ANPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp ------------------------HHHHHHHHHHHCH----TTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred ------------------------HHHHHHHHHHHHh----cCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 3345555555533 245778888763 455679999999887
No 467
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.07 E-value=2.7e-05 Score=74.56 Aligned_cols=33 Identities=33% Similarity=0.540 Sum_probs=28.8
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
.++|+|++|+||++++++ +.++||..++.-++.
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp~ 179 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDGDIA 179 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCcCCHH
Confidence 589999999999998877 899999998876554
No 468
>PRK12396 5-methylribose kinase; Reviewed
Probab=98.04 E-value=3.1e-05 Score=77.70 Aligned_cols=111 Identities=13% Similarity=0.106 Sum_probs=63.3
Q ss_pred CCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHH
Q 012411 104 LPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLI 183 (464)
Q Consensus 104 ~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~ 183 (464)
..++..+.+...+.+.+|. +..- +...-++||-|...-||++.+..+++.|+||.-.|-++.. .+
T Consensus 7 y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~--~s----------- 71 (409)
T PRK12396 7 YFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARIS--DE----------- 71 (409)
T ss_pred ceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccC--CC-----------
Confidence 3455666666666554441 1100 1223478999999999999985236789999765543310 00
Q ss_pred HhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecC
Q 012411 184 NKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG 253 (464)
Q Consensus 184 ~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G 253 (464)
+ ...+... ..|+..+....+.. .-.+|++|.......++|||+++.
T Consensus 72 --w----pL~~~R~--------------~~E~~aL~~~~~~~----P~~VP~vy~~D~e~~~~vMEdL~~ 117 (409)
T PRK12396 72 --F----KLSTNRI--------------RIESDVLQLEEELA----PGLVPKVYLFDSVMNCCVMEDLSD 117 (409)
T ss_pred --C----CCChHHH--------------HHHHHHHHHHHhhC----CCcCCeEEEECcHHhhHHHHhCcc
Confidence 0 0111111 12333333333321 223899998888888999999965
No 469
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.00 E-value=1.6e-05 Score=82.82 Aligned_cols=180 Identities=15% Similarity=0.124 Sum_probs=110.7
Q ss_pred cccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHH
Q 012411 136 IAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEG 215 (464)
Q Consensus 136 ig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea 215 (464)
.+-++.+..+.|..+.+|.+|.|.+..-.-......-.+.. .++...+||+|..+++.+...
T Consensus 20 ~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~-------k~lKtlRHP~Il~yL~t~e~~----------- 81 (690)
T KOG1243|consen 20 TAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAV-------KRLKTLRHPNILSYLDTTEEE----------- 81 (690)
T ss_pred ccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHH-------HHhhhccCchhhhhhhhhccc-----------
Confidence 33344443336777779999999987543321111111111 222234699998888865432
Q ss_pred HHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHH-HCCcccCCC
Q 012411 216 QNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLL-EYGYFHADP 294 (464)
Q Consensus 216 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~gi~H~Dl 294 (464)
+..|||+|.+. +|..+ .+..+.........+|..||.+|| +.+++|+++
T Consensus 82 --------------------------~~~ylvTErV~--Pl~~~--lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv 131 (690)
T KOG1243|consen 82 --------------------------GTLYLVTERVR--PLETV--LKELGKEEVCLGLFQILAALSFLNDDCNLVHGNV 131 (690)
T ss_pred --------------------------CceEEEeeccc--cHHHH--HHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccE
Confidence 56689999984 45544 333333333455678889999997 678999999
Q ss_pred CCcceEEccCCcEEEEecCCCCcCCHHHH-HHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhc
Q 012411 295 HPGNLLATPEGKLAFLDFGMMSETPEEAR-FAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDAL 372 (464)
Q Consensus 295 kp~Nili~~~g~i~l~DFGl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~ 372 (464)
--+-++|+..|.-+|.+|-.+...+.... .... ...-...+|..+.+. ....|.|.|||.+++++++.+
T Consensus 132 ~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~--~~~~s~~~P~~~~~s-------~~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 132 CKDSVFVNESGEWKLGGLELVSKASGFNAPAKSL--YLIESFDDPEEIDPS-------EWSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred eeeeEEEcCCCcEEEeeeEEEeccccCCcccccc--hhhhcccChhhcCcc-------ccchhhhhHHHHHHHHhCccc
Confidence 99999999999999999988865433210 0000 000111222211000 123699999999999998733
No 470
>PLN02876 acyl-CoA dehydrogenase
Probab=97.97 E-value=6.3e-05 Score=83.92 Aligned_cols=108 Identities=17% Similarity=0.208 Sum_probs=63.1
Q ss_pred CCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCC---cEEEEEEecCChHHHHHHHHHHHHHHHHH
Q 012411 106 TFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSG---QIVAVKVQRPGIEEAIGLDFYLIRGVGFL 182 (464)
Q Consensus 106 p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g---~~VAVKv~~p~~~~~~~~d~~~l~~~~~~ 182 (464)
+++.+.+...+.+.++. +..-...+.-++++.|....+|+.... +| ..+++|...++....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~-~~~~~~~~VLR~~p~~~~~~-------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVG-NGGSVKRYVLRKKPPGKLLQ-------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEEC-CCCcceeEEEEeCCCCccCc--------------
Confidence 35666666666655431 111001123478999999999998875 33 478888865541100
Q ss_pred HHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCC-----CCceEEEeeecCcccC
Q 012411 183 INKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYT-----SGKVLTMEWVEGVKLN 257 (464)
Q Consensus 183 ~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-----~~~~LvmE~~~G~~L~ 257 (464)
. .-++.+|++.+..+.. ...+.+|++|.... +..++||||++|..+.
T Consensus 81 ----------~--------------~~~~~rE~~~l~~L~~----~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~ 132 (822)
T PLN02876 81 ----------S--------------AHAVEREYQVLRALGE----HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFV 132 (822)
T ss_pred ----------c--------------HHHHHHHHHHHHHHhh----cCCCCCCcEEEEecCCCcCCCceEEEEecCCcccC
Confidence 0 0012334444444432 35588899887532 3578999999997654
No 471
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=97.96 E-value=3.1e-05 Score=79.57 Aligned_cols=130 Identities=16% Similarity=0.086 Sum_probs=90.4
Q ss_pred CCceEEEeeecCcccCcHHHHHhcCCCHHH--HHHHHHHHHHHHHHHCCc-ccCCCCCcceEEccCCcEEEEecCCCCcC
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIESQGLKVLD--LVNTGIQCSLRQLLEYGY-FHADPHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~~~~~~~~--~~~~~i~~~l~~lh~~gi-~H~Dlkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
...+.+.+||.-|+|.|.........+..- ...+-+..++.|+|.-.+ +|+-+++.|.+++..-.+|+.|||+....
T Consensus 20 ~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~ 99 (484)
T KOG1023|consen 20 PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLL 99 (484)
T ss_pred CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccc
Confidence 445689999999999998776555555432 233456669999998665 99999999999999999999999998876
Q ss_pred CHH-HHHHHHHHHHHHHhcCHHHHHHHHHH-c-CCCCCCCCcchHHHHHHHHHHHh
Q 012411 319 PEE-ARFAIIGHVVHMVNRDYEAMARDYYA-L-DFLSPDVDVTPIVPALRNFFDDA 371 (464)
Q Consensus 319 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~D~~sl~~~l~~~~~~~ 371 (464)
... ....-........+..|+.+...... . ...+...|++|++..+++++..-
T Consensus 100 ~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 100 EETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred cccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 421 00111112234555666665443211 1 12466789999999999999843
No 472
>PRK06148 hypothetical protein; Provisional
Probab=97.95 E-value=0.00023 Score=80.90 Aligned_cols=56 Identities=16% Similarity=0.383 Sum_probs=44.0
Q ss_pred hhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCC
Q 012411 100 LQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (464)
Q Consensus 100 l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (464)
+....|.++.+++.+.+++.+|..- .+ ++|++ ..-++|+.... +|+.+++|+.++.
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-----~~--~~L~s-~~d~nf~v~~~-~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-----TA--TPLDG-ERDLNFRLTTD-DGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-----EE--eecCC-cCCceEEEEeC-CCCeEEEEEcCCc
Confidence 3456788899999999999999642 12 67864 56889999876 7889999999875
No 473
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.79 E-value=0.00043 Score=63.39 Aligned_cols=156 Identities=19% Similarity=0.238 Sum_probs=92.7
Q ss_pred CcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 133 PSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 133 ~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
..+||+|+.=.||. ++ +.....|||.++........ ...+..++.+.. -.....+|+++
T Consensus 6 ~~~i~~G~~R~cy~--HP-~dp~~cIKV~~~~~~~~~~~-------~~~~~k~~~~~~----------~~~~~~~E~~~- 64 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HP-DDPNLCIKVMRPDRGERRRP-------FKRWLKRLRPKS----------RYRQNRRELRY- 64 (199)
T ss_pred CcccccCCCceEEE--CC-CCCCeEEEEEcccccccccc-------chhHHHhhcccc----------hhHHHHHHHHH-
Confidence 47899999988884 33 67789999999875111000 001111111000 01122333332
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCC--CceEEEeeecC--cc----cCcHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTS--GKVLTMEWVEG--VK----LNEQVAIESQGLKVLDLVNTGIQCSLRQL 284 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~--~~~LvmE~~~G--~~----L~~~~~~~~~~~~~~~~~~~~i~~~l~~l 284 (464)
-..+.. -.+..+..+|+.|....| ..-+|+|.+.. |. |.++ ....+.+. .+...+....+++
T Consensus 65 -----y~~l~~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~--l~~~~~~~--~~~~~L~~f~~~l 134 (199)
T PF10707_consen 65 -----YKQLSL-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDY--LKEGGLTE--ELRQALDEFKRYL 134 (199)
T ss_pred -----HHHHhh-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHH--HHcCCccH--HHHHHHHHHHHHH
Confidence 233332 345567778888876544 44789998853 23 3333 23334444 4455666788999
Q ss_pred HHCCcccCCCCCcceEEccC--C--cEEEEe-cCCCCcCC
Q 012411 285 LEYGYFHADPHPGNLLATPE--G--KLAFLD-FGMMSETP 319 (464)
Q Consensus 285 h~~gi~H~Dlkp~Nili~~~--g--~i~l~D-FGl~~~l~ 319 (464)
.+++|+.+|++|+||++... | +++|+| ||....++
T Consensus 135 ~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ip 174 (199)
T PF10707_consen 135 LDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELIP 174 (199)
T ss_pred HHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCccccc
Confidence 99999999999999999733 2 589999 46555544
No 474
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.73 E-value=0.00022 Score=69.87 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=30.2
Q ss_pred CCcccCCCCCcceEEccC----CcEEEEecCCCCcCCHH
Q 012411 287 YGYFHADPHPGNLLATPE----GKLAFLDFGMMSETPEE 321 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~----g~i~l~DFGl~~~l~~~ 321 (464)
.+++|+|++|+||+++++ +.+++|||..++.-.+.
T Consensus 179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~ 217 (302)
T cd05156 179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRG 217 (302)
T ss_pred ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcH
Confidence 468999999999999875 88999999999876554
No 475
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.73 E-value=0.00063 Score=66.64 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=31.4
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
..++|+|.|++|+++++++.+.++||+++..=++.
T Consensus 198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeCCCeeEEEeccccccCCcH
Confidence 45899999999999999999999999999876665
No 476
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.69 E-value=5e-05 Score=70.86 Aligned_cols=230 Identities=12% Similarity=0.113 Sum_probs=129.0
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-IEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
+.|+..-.|..|+|++. |..+++|++.-. ...++.+|. .....++.-+.|||+..++..+..
T Consensus 196 tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdf------neefp~lrifshpnilpvlgacns--------- 258 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDF------NEEFPALRIFSHPNILPVLGACNS--------- 258 (448)
T ss_pred hhhccCCCccccccccc--Ccchhhhhhhhhhcchhhcchh------hhhCcceeeecCCchhhhhhhccC---------
Confidence 56788888999999995 778888887521 111222222 222233334457887777765321
Q ss_pred HHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh-cCCCHHHHH--HHHHHHHHHHHHHCC-
Q 012411 213 QEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLV--NTGIQCSLRQLLEYG- 288 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~--~~~i~~~l~~lh~~g- 288 (464)
.-..+++..|++-++|..+..... .-.+..+.+ ...+..++.++|+..
T Consensus 259 ----------------------------ppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep 310 (448)
T KOG0195|consen 259 ----------------------------PPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEP 310 (448)
T ss_pred ----------------------------CCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcch
Confidence 123468999999999988743211 112333333 344566899999753
Q ss_pred -cccCCCCCcceEEccCCc--EEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHH
Q 012411 289 -YFHADPHPGNLLATPEGK--LAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALR 365 (464)
Q Consensus 289 -i~H~Dlkp~Nili~~~g~--i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~ 365 (464)
+----+....++|+++-+ +...|--.+-+ -.|-.++.+...||.+.+.--+.. -...|+|||...++
T Consensus 311 ~ipr~~lns~hvmidedltarismad~kfsfq--------e~gr~y~pawmspealqrkped~n--~raadmwsfaillw 380 (448)
T KOG0195|consen 311 MIPRFYLNSKHVMIDEDLTARISMADTKFSFQ--------EVGRAYSPAWMSPEALQRKPEDLN--IRAADMWSFAILLW 380 (448)
T ss_pred hhhhhhcccceEEecchhhhheecccceeeee--------ccccccCcccCCHHHHhcCchhcc--hhhhhHHHHHHHHH
Confidence 222346667888887754 33344222111 011122334455666544322222 23579999999999
Q ss_pred HHHHHhccCCCCcCcHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHHHHHhhcccCCCCC
Q 012411 366 NFFDDALNSSVSELNFKTIVDGLGAVLYQYPFNVPAYYALILRSLTVLEGLALYADPNFK 425 (464)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~ldP~~~ 425 (464)
|+.+ ...|+.+.+.-+.... ..+......+||..+.-+. .+-.+|..-||.-+
T Consensus 381 el~t--revpfadlspmecgmk--ialeglrv~ippgis~hm~---klm~icmnedpgkr 433 (448)
T KOG0195|consen 381 ELNT--REVPFADLSPMECGMK--IALEGLRVHIPPGISRHMN---KLMNICMNEDPGKR 433 (448)
T ss_pred Hhhc--cccccccCCchhhhhh--hhhccccccCCCCccHHHH---HHHHHHhcCCCCcC
Confidence 9988 4567776664333322 2233445667766543333 33445666676543
No 477
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.68 E-value=0.00045 Score=68.28 Aligned_cols=29 Identities=31% Similarity=0.525 Sum_probs=26.7
Q ss_pred cccCCCCCcceEEccCCc-EEEEecCCCCc
Q 012411 289 YFHADPHPGNLLATPEGK-LAFLDFGMMSE 317 (464)
Q Consensus 289 i~H~Dlkp~Nili~~~g~-i~l~DFGl~~~ 317 (464)
++|+|+||+||+++++.. +.++|||-++.
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 999999999999998885 89999998875
No 478
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.66 E-value=0.0005 Score=66.57 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=29.3
Q ss_pred CCcccCCCCCcceEEccCCc-EEEEecCCCCcCCHH
Q 012411 287 YGYFHADPHPGNLLATPEGK-LAFLDFGMMSETPEE 321 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~-i~l~DFGl~~~l~~~ 321 (464)
..++|+|+||+||+++++++ ..|+||+.+..-++.
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa 220 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPA 220 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHH
Confidence 35899999999999987666 479999999876654
No 479
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.64 E-value=0.0012 Score=60.81 Aligned_cols=96 Identities=13% Similarity=0.162 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchh
Q 012411 109 DAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVD 188 (464)
Q Consensus 109 ~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~ 188 (464)
|..+.+.+.+.+|.. ++ -+.+++.-|.+-+.|+..+ ...++-||+......+
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d--g~~~~FvK~n~~~~~~--------------------- 53 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD--GTDPFFVKCNQREQLS--------------------- 53 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec--CCcceEEEecchhhHH---------------------
Confidence 567778888888875 22 2346777777777776664 4568999987522111
Q ss_pred cccCCHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCC--CceEEEeeecCcccC
Q 012411 189 IITTDVVALIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTS--GKVLTMEWVEGVKLN 257 (464)
Q Consensus 189 ~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~--~~~LvmE~~~G~~L~ 257 (464)
-|..|+..++.+.+. +.+.||+|+..-++ ..||||||++-+++.
T Consensus 54 ---------------------~f~AEa~gL~~la~s----~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 54 ---------------------MFTAEADGLELLARS----NTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred ---------------------HHHHHHHHHHHHHhc----CCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 145566666666553 56889999887654 459999999988877
No 480
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.64 E-value=0.00016 Score=71.75 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=25.8
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
..++|+|+|||||++++++ ++++||-.+..-+
T Consensus 192 ~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G~ 223 (370)
T TIGR01767 192 ETLLHGDLHSGSIFVSEHE-TKVIDPEFAFYGP 223 (370)
T ss_pred ceeeeccCCcccEEEcCCC-CEEEcCcccccCc
Confidence 5689999999999997654 8899997665433
No 481
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.58 E-value=0.0012 Score=65.59 Aligned_cols=31 Identities=32% Similarity=0.491 Sum_probs=26.3
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
.|++|+|+||+||+++ + .+.++||+-++.-.
T Consensus 196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~g~ 226 (325)
T PRK11768 196 LLRLHGDCHPGNILWR-D-GPHFVDLDDARMGP 226 (325)
T ss_pred ccceecCCCchhcccc-C-CcEEEeCCCCCCCC
Confidence 5789999999999994 4 58899999988643
No 482
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.56 E-value=4.9e-06 Score=85.51 Aligned_cols=192 Identities=15% Similarity=0.119 Sum_probs=107.4
Q ss_pred ccccc--ceecEEEEEEE--ccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHh
Q 012411 134 SPIAA--ASLGQVYKAQL--KYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQEL 209 (464)
Q Consensus 134 ~pig~--Gs~gqV~~a~~--~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~El 209 (464)
..+|+ |++|+||.+.. ..++..+|+|.++.-...-. .-++.+..+........|.+.+.
T Consensus 120 ~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~----~~~~k~~~~~s~~~i~~~~~~v~------------- 182 (524)
T KOG0601|consen 120 SRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPL----DSKRKLREFLSHHKIDSHENPVR------------- 182 (524)
T ss_pred cccccCCCCCceeecccCCcccCCcccccccccCCCCCcc----ccccccchhhcccccCccccccc-------------
Confidence 67899 99999999998 78999999998642211000 00000000000000001111111
Q ss_pred cHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh--cCCCHHHHHHHHHHH----HHHH
Q 012411 210 NYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVNTGIQC----SLRQ 283 (464)
Q Consensus 210 d~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~~~i~~----~l~~ 283 (464)
-...|+-++..++-+|+|. .++..+..... .......-....... ++.+
T Consensus 183 ------------------------~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~ 237 (524)
T KOG0601|consen 183 ------------------------DSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSH 237 (524)
T ss_pred ------------------------cCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccc
Confidence 1123344566788889886 45554433211 111222222233444 8999
Q ss_pred HHHCCcccCCCCCcceEEccC-CcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHH
Q 012411 284 LLEYGYFHADPHPGNLLATPE-GKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVP 362 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~~~-g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~ 362 (464)
+|..+++|-|++|.||+...+ ...++.|||++..+.+..-....... .-..++.-++++... -|..+...|+.+++.
T Consensus 238 ~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~e 315 (524)
T KOG0601|consen 238 LHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVS-KRPEGDCIYAAKELL-NGLATFASDIFSLGE 315 (524)
T ss_pred cCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeee-ecCCCCceEeChhhh-ccccchHhhhcchhh
Confidence 999999999999999999999 77999999999988654211110000 011223333333332 334456677888776
Q ss_pred HHHHHHH
Q 012411 363 ALRNFFD 369 (464)
Q Consensus 363 ~l~~~~~ 369 (464)
.+.+...
T Consensus 316 v~l~~~l 322 (524)
T KOG0601|consen 316 VILEAIL 322 (524)
T ss_pred hhHhhHh
Confidence 6655544
No 483
>PRK06149 hypothetical protein; Provisional
Probab=97.50 E-value=0.0011 Score=75.14 Aligned_cols=58 Identities=12% Similarity=0.298 Sum_probs=42.1
Q ss_pred HHHhhcCCCCCCHHHHHHHHHHHhCCCHHhhhcccCCcccccceecEEEEEEEccCCcEEEEEEecCC
Q 012411 97 LSELQDALPTFPDAEAFSCIERELGLTLDSIFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (464)
Q Consensus 97 l~~l~d~~~p~~~~~~~~~i~~~lg~~~~~~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (464)
+..+....|.++.+++..++.+.+|.. .+ + .+++++. -.+|+.... +..+++|+.++.
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~-~~----~--~~L~s~~-d~nf~v~t~--~~~yVLKi~~~~ 64 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLS-GT----L--TELGSQQ-DRNFRVDSD--GGRFVLKICHAA 64 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCc-eE----E--EecCCcC-cceEEEEec--CCcEEEEeCCcc
Confidence 445666788899999999999999864 11 1 5676544 478988764 457899998865
No 484
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.40 E-value=7.4e-05 Score=77.00 Aligned_cols=142 Identities=17% Similarity=0.168 Sum_probs=92.6
Q ss_pred cccccceecEEEEEEEc-cCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHH
Q 012411 134 SPIAAASLGQVYKAQLK-YSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYV 212 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~-~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~ 212 (464)
..||.|.|+.|+....+ .++..+++|-...+.... ..|+.-+..+......
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~-~~di~sl~ev~l~~~l--------------------------- 322 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF-ASDIFSLGEVILEAIL--------------------------- 322 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccch-HhhhcchhhhhHhhHh---------------------------
Confidence 67999999999987755 577889999776553332 2333222221111000
Q ss_pred HHHHHHHHHHHHhCCCCCEEece--eeccCCCCceEEEeeecCcccCcHHHH-HhcCCCHHHHHHHHHHHHHHHHHHCCc
Q 012411 213 QEGQNARRFKKLYADKEDVLVPD--IFWDYTSGKVLTMEWVEGVKLNEQVAI-ESQGLKVLDLVNTGIQCSLRQLLEYGY 289 (464)
Q Consensus 213 ~Ea~n~~~~~~~~~~~~~v~vP~--v~~~~~~~~~LvmE~~~G~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~gi 289 (464)
.....++. .-|..-.+.++-.|||+|++....... .....+.......++..++.++|+..+
T Consensus 323 ---------------~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~ 387 (524)
T KOG0601|consen 323 ---------------GSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLF 387 (524)
T ss_pred ---------------hcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhh
Confidence 00111122 223333556799999999887654322 123344555566777789999999999
Q ss_pred ccCCCCCcceEEccC-CcEEEEecCCCCcC
Q 012411 290 FHADPHPGNLLATPE-GKLAFLDFGMMSET 318 (464)
Q Consensus 290 ~H~Dlkp~Nili~~~-g~i~l~DFGl~~~l 318 (464)
+|.|++|.||++..+ +-.++.|||+...+
T Consensus 388 ~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 388 VHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred hcccccccceeeccchhhhhcccccccccc
Confidence 999999999999876 67889999988753
No 485
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=97.31 E-value=0.0077 Score=61.63 Aligned_cols=138 Identities=17% Similarity=0.183 Sum_probs=91.3
Q ss_pred ecEEEEEEEccCCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 012411 141 LGQVYKAQLKYSGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVALIDEFASRVYQELNYVQEGQNARR 220 (464)
Q Consensus 141 ~gqV~~a~~~~~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~Eld~~~Ea~n~~~ 220 (464)
-...|+|+...||..|++|.++.+.......|..+. +.|.+..|.|++.+.+.|...
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lv-------e~wkkl~h~NvV~frevf~t~---------------- 345 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLV-------EAWKKLCHTNVVPFREVFLTY---------------- 345 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHH-------HHHHHhccCceeehhhhhhhh----------------
Confidence 357899999999999999988543333333333333 333344588888777665421
Q ss_pred HHHHhCCCCCEEeceeeccCCCCceEEEeeecC-cccCcHHHHH------------hcC--C--CHHHHHHHHHHHHHHH
Q 012411 221 FKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEG-VKLNEQVAIE------------SQG--L--KVLDLVNTGIQCSLRQ 283 (464)
Q Consensus 221 ~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G-~~L~~~~~~~------------~~~--~--~~~~~~~~~i~~~l~~ 283 (464)
.| .....+||.+|.++ ++|.+.-... ..+ . ...-.+..|+..+|.+
T Consensus 346 ---tF--------------~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~s 408 (655)
T KOG3741|consen 346 ---TF--------------GDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYS 408 (655)
T ss_pred ---cc--------------CcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHH
Confidence 11 12456799999887 3444421100 011 1 1222445677789999
Q ss_pred HHHCCcccCCCCCcceEEccCCcEEEEecCCCCcC
Q 012411 284 LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 284 lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
+|+.|+--+-+.|.+|+++.+-+|+|.-.|..-.+
T Consensus 409 IHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 409 IHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHhcCceeecccHhHeEeeCcceEEEecccceeee
Confidence 99999999999999999998888999888877655
No 486
>PLN02236 choline kinase
Probab=97.23 E-value=0.0042 Score=62.14 Aligned_cols=35 Identities=23% Similarity=0.483 Sum_probs=29.5
Q ss_pred CCcccCCCCCcceEEcc-CCcEEEEecCCCCcCCHH
Q 012411 287 YGYFHADPHPGNLLATP-EGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~-~g~i~l~DFGl~~~l~~~ 321 (464)
..+.|+|++++|||+++ ++.+.++||..++.-++.
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~ 235 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVA 235 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchH
Confidence 36899999999999986 478999999999875543
No 487
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.09 E-value=0.0034 Score=60.75 Aligned_cols=170 Identities=21% Similarity=0.215 Sum_probs=99.1
Q ss_pred hhcccCCcccccceecEEEEEEEc------c----CCcEEEEEEecCChHHHHHHHHHHHHHHHHHHHhchhcccCCHHH
Q 012411 127 IFSSISPSPIAAASLGQVYKAQLK------Y----SGQIVAVKVQRPGIEEAIGLDFYLIRGVGFLINKYVDIITTDVVA 196 (464)
Q Consensus 127 ~f~~~~~~pig~Gs~gqV~~a~~~------~----~g~~VAVKv~~p~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~i~~ 196 (464)
+++.++ -.|+.|.-+.|..|.-- . .-+++||||.+-...+--.+|-.+ +.=.++-.++. ..|...
T Consensus 252 vle~i~-GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~Yi-KDDfRFKDRFS---K~NpR~ 326 (531)
T KOG2269|consen 252 VLESID-GIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYI-KDDFRFKDRFS---KQNPRG 326 (531)
T ss_pred hHHhhh-hhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhh-ccchhhhhhhc---ccCcHH
Confidence 444554 46888888888888421 0 124688888764433222222111 11112222222 345555
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHh--cCCCHHHHHH
Q 012411 197 LIDEFASRVYQELNYVQEGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIES--QGLKVLDLVN 274 (464)
Q Consensus 197 ~~~~~~~~~~~Eld~~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~--~~~~~~~~~~ 274 (464)
++.-+.+ +|..|+.++... .+.+|.|+. -..++|||.|+....+..- .+.. ..-+....+.
T Consensus 327 i~~mWAE---------kEmhNL~RMq~~-----GlpcP~vV~--lkkhvLVMsFiGd~~~aAP-kLK~v~l~d~E~~~aY 389 (531)
T KOG2269|consen 327 ILKMWAE---------KEMHNLSRMQKH-----GLPCPQVVK--LKKHVLVMSFIGDQGLAAP-KLKNVELTDDERRNAY 389 (531)
T ss_pred HHHHHHH---------HHHHHHHHHHhc-----CCCCCceee--eecceEEEEeecCCCCCCc-cccccccChHHHHHHH
Confidence 5554443 367788888764 455666653 2678999999954333221 1111 2222334445
Q ss_pred HHHHHHHHH-HHHCCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 275 TGIQCSLRQ-LLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 275 ~~i~~~l~~-lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
.+++..+.. .|++-++|+|+.--|+|..++ ++.+||-..+...+
T Consensus 390 ~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~~g-Kvw~IDVsQsvep~ 434 (531)
T KOG2269|consen 390 DQVQSIMCRLYKECLLVHADLSEYNLLWTPG-KVWVIDVSQSVEPS 434 (531)
T ss_pred HHHHHHHHHHHHhhheeecchhhhhheecCC-ceEEEechhccCCC
Confidence 566665554 457889999999999999665 99999987766543
No 488
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=96.74 E-value=0.011 Score=53.98 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=37.6
Q ss_pred eEEEeeecCcccCcHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCC
Q 012411 245 VLTMEWVEGVKLNEQVAIESQGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMM 315 (464)
Q Consensus 245 ~LvmE~~~G~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~ 315 (464)
-||-||++...-. .... ...+..-+..+|..||+-+|+++.|.. + -+|+|||.+
T Consensus 153 aIVKD~v~~~~~~----------~~~~--~~~~~~dl~~~~k~gI~~~Dv~~~ny~---~--G~lvDfs~~ 206 (207)
T PF13095_consen 153 AIVKDFVPDDPPL----------QIRD--IPQMLRDLKILHKLGIVPRDVKPRNYR---G--GKLVDFSSS 206 (207)
T ss_pred EEEEeecCCcccc----------chhH--HHHHHHHHHHHHHCCeeeccCcccccc---C--CEEEecccC
Confidence 5888888775411 1111 123345677899999999999999985 3 478899864
No 489
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.64 E-value=0.005 Score=55.97 Aligned_cols=85 Identities=15% Similarity=0.203 Sum_probs=57.9
Q ss_pred EeceeeccCCCCceEEEeeecCcccCcH----HHHHhcCCCHHHHHHHHHHHHHHHHHH---CCcccCCCCCcceEEccC
Q 012411 232 LVPDIFWDYTSGKVLTMEWVEGVKLNEQ----VAIESQGLKVLDLVNTGIQCSLRQLLE---YGYFHADPHPGNLLATPE 304 (464)
Q Consensus 232 ~vP~v~~~~~~~~~LvmE~~~G~~L~~~----~~~~~~~~~~~~~~~~~i~~~l~~lh~---~gi~H~Dlkp~Nili~~~ 304 (464)
.+|+++.. ..+++++||+..+++... .......+.....+..++...+.+++. ..+.-+|++|+|+-++++
T Consensus 21 ~~pk~lG~--CG~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~ 98 (188)
T PF12260_consen 21 PFPKLLGS--CGRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD 98 (188)
T ss_pred CCCCeeeE--CCCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC
Confidence 78888864 466889999987755321 111122223333344555556666665 446779999999999999
Q ss_pred CcEEEEecCCCCcC
Q 012411 305 GKLAFLDFGMMSET 318 (464)
Q Consensus 305 g~i~l~DFGl~~~l 318 (464)
|+++++|...+...
T Consensus 99 ~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 99 GRLKLIDLDDVFVE 112 (188)
T ss_pred CcEEEEechhcchh
Confidence 99999999887654
No 490
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.60 E-value=0.013 Score=58.34 Aligned_cols=33 Identities=39% Similarity=0.557 Sum_probs=28.4
Q ss_pred cccCCCCCcceEEcc-CCcEEEEecCCCCcCCHH
Q 012411 289 YFHADPHPGNLLATP-EGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 289 i~H~Dlkp~Nili~~-~g~i~l~DFGl~~~l~~~ 321 (464)
+.|.|++|+|||+++ ++++++|||..++.-++.
T Consensus 184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~ 217 (330)
T PLN02421 184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRG 217 (330)
T ss_pred EEECCCCcccEEEeCCCCcEEEEcccccCCCccH
Confidence 799999999999975 578999999999876554
No 491
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=96.55 E-value=0.0019 Score=70.57 Aligned_cols=93 Identities=14% Similarity=0.087 Sum_probs=55.2
Q ss_pred ccCCCCCc-ceEEccCCcEEEEecCCCCcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHH
Q 012411 290 FHADPHPG-NLLATPEGKLAFLDFGMMSETPEEARFAIIGHVVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFF 368 (464)
Q Consensus 290 ~H~Dlkp~-Nili~~~g~i~l~DFGl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~ 368 (464)
-|+++.|. |+++++++.+++.|||.+..+.........+. ..+.+.+++++++.....+..+|+|++||.+++++
T Consensus 499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~----~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~Ell 574 (669)
T cd05610 499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGER----ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFL 574 (669)
T ss_pred CCCCCCCCCceeECCccccccccCCCchhhhcccccccCCc----eeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 45677777 67777778789999998876533211100000 11223333333332233577899999999999999
Q ss_pred HHhccCCCCcCcHHHHHHHH
Q 012411 369 DDALNSSVSELNFKTIVDGL 388 (464)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~l 388 (464)
++ ..++.......++..+
T Consensus 575 tG--~~pf~~~~~~~~~~~i 592 (669)
T cd05610 575 TG--IPPFNDETPQQVFQNI 592 (669)
T ss_pred HC--CCCCCCCCHHHHHHHH
Confidence 84 3555555555544433
No 492
>PRK10271 thiK thiamine kinase; Provisional
Probab=96.44 E-value=0.0027 Score=57.32 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=28.7
Q ss_pred CcccCCCCCcceEEccCCcEEEEecCCCCcCCHH
Q 012411 288 GYFHADPHPGNLLATPEGKLAFLDFGMMSETPEE 321 (464)
Q Consensus 288 gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~~ 321 (464)
-..|+|+||+|++++++| ++++||+.++.-++.
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDIA 110 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccCCCHH
Confidence 369999999999998777 999999999887664
No 493
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=96.02 E-value=0.021 Score=54.28 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=26.8
Q ss_pred cccccceecEEEEEEEccCCcEEEEEEecCC
Q 012411 134 SPIAAASLGQVYKAQLKYSGQIVAVKVQRPG 164 (464)
Q Consensus 134 ~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~ 164 (464)
.++..|+.+.|+.++.. +|+++++|+..|.
T Consensus 8 ~~~~~g~~s~V~pv~~~-dG~~avLKl~~p~ 37 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRA-DGTPAVLKLAPPH 37 (253)
T ss_pred CCCCCCcceEEEEEEcC-CCCeEEEEecCCc
Confidence 46778999999999987 9999999999876
No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.99 E-value=0.02 Score=56.57 Aligned_cols=179 Identities=15% Similarity=0.073 Sum_probs=93.2
Q ss_pred hhcccCCcccccceecEEEEEEEccCCcEEEEEEecCC-hHHHHHHHHHHHHHHHHHHHh--chh-------------cc
Q 012411 127 IFSSISPSPIAAASLGQVYKAQLKYSGQIVAVKVQRPG-IEEAIGLDFYLIRGVGFLINK--YVD-------------II 190 (464)
Q Consensus 127 ~f~~~~~~pig~Gs~gqV~~a~~~~~g~~VAVKv~~p~-~~~~~~~d~~~l~~~~~~~~~--~~~-------------~~ 190 (464)
-+..++..|++.|..+.++.|++. +...++=++..-+ -......|..+++.+..+... +.. +.
T Consensus 153 ns~~kk~~pvpDqvs~dk~Q~k~~-~stsl~~l~s~~~l~~n~~d~d~~nl~QI~q~~dvk~fan~~~v~~vlgl~~~ln 231 (488)
T COG5072 153 NSQTKKICPVPDQVSSDKIQAKLA-DSTSLVSLVSPFGLPGNAQDADVLNLVQILQWCDVKGFANLHQVVVVLGLYPSLN 231 (488)
T ss_pred cccccccccCcccchhhhhhhhhc-cCcceeeccccccCCCCccccchHHHHHHHHHhhhhhhccccceeEEeccccccc
Confidence 344556779999999999999997 7777777766433 122335566666666544321 111 11
Q ss_pred cCCHHHHHHHHHHHHHHHhcHH-------------------HHHHHHHHHHHHhCCCCCEEeceeec-cCCCCceEEEee
Q 012411 191 TTDVVALIDEFASRVYQELNYV-------------------QEGQNARRFKKLYADKEDVLVPDIFW-DYTSGKVLTMEW 250 (464)
Q Consensus 191 ~~~i~~~~~~~~~~~~~Eld~~-------------------~Ea~n~~~~~~~~~~~~~v~vP~v~~-~~~~~~~LvmE~ 250 (464)
++.-..+...+ -+|+++. .|....+-..-........--|.+|. +...-.|++|++
T Consensus 232 ~~~s~qlssn~----~q~~i~kkvs~g~~~~~~~d~~fls~~ele~l~L~qw~~~g~~~~e~~~vv~~de~~y~yl~~kd 307 (488)
T COG5072 232 LEESDQLSSNN----WQENICKKVSLGSTQDYTVDCLFLSLTELEHLELRQWRECGSVFLETLKVVSLDETLYLYLHFKD 307 (488)
T ss_pred chhhhHHhhhc----chheeecccccccchhhhhhhhhhhccccchhhhhhhhhccchhhhcceEEecCCceEEEEEEec
Confidence 12222222221 1222221 01111111111112223344455555 222234677776
Q ss_pred ecCcccCcHHHHHhcCCCHHHHHHHHHH-HHHHHHHH--CCcccCCCCCcceEEccCCcEEEEecCCCCc
Q 012411 251 VEGVKLNEQVAIESQGLKVLDLVNTGIQ-CSLRQLLE--YGYFHADPHPGNLLATPEGKLAFLDFGMMSE 317 (464)
Q Consensus 251 ~~G~~L~~~~~~~~~~~~~~~~~~~~i~-~~l~~lh~--~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~ 317 (464)
- |+++.-.... +..+....... ..+-+..+ ..+=|||++-+||+|+ +|+|.||||-+++.
T Consensus 308 h-gt~is~ik~~-----~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl 370 (488)
T COG5072 308 H-GTPISIIKAD-----RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL 370 (488)
T ss_pred C-Cceeeeeecc-----cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence 4 5566543221 12222221111 13333333 4578999999999998 99999999999884
No 495
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=95.56 E-value=0.15 Score=52.22 Aligned_cols=55 Identities=9% Similarity=0.179 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHHHHhCCCHHhhhc-ccCCccccc--ceecEEEEEEEccC--------CcEEEEEEec
Q 012411 106 TFPDAEAFSCIERELGLTLDSIFS-SISPSPIAA--ASLGQVYKAQLKYS--------GQIVAVKVQR 162 (464)
Q Consensus 106 p~~~~~~~~~i~~~lg~~~~~~f~-~~~~~pig~--Gs~gqV~~a~~~~~--------g~~VAVKv~~ 162 (464)
.+.|+++...+.+.+|... .|. .-.-+.||. |=.+.|.+....=+ -+.||+|+-.
T Consensus 12 hvtw~dve~~l~~~l~t~a--~~g~~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S 77 (414)
T PF07914_consen 12 HVTWEDVEEALQEALGTKA--KFGENKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPS 77 (414)
T ss_pred ceeHHHHHHHHHHHhCCCc--CcCCCcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEecc
Confidence 5689999999999998631 121 122245664 44577777663211 3589999865
No 496
>PTZ00384 choline kinase; Provisional
Probab=95.33 E-value=0.23 Score=50.36 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=26.4
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCC
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETP 319 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~ 319 (464)
..+.|.|+.++||+.+ ++.+.+|||-.++.-.
T Consensus 227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~~n~ 258 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAGFNY 258 (383)
T ss_pred eeeeeccCCcccEEec-CCCEEEEEeccccCCc
Confidence 5689999999999874 5569999998887543
No 497
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.09 E-value=0.036 Score=54.38 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=27.1
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcC
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSET 318 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l 318 (464)
.|++|+|+|++||+++. +.+.++||+.+..-
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~~ 217 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTID 217 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccccC
Confidence 68999999999999987 77999999977653
No 498
>PTZ00296 choline kinase; Provisional
Probab=94.86 E-value=0.45 Score=49.23 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=26.8
Q ss_pred CCcccCCCCCcceEEccCCcEEEEecCCCCcCCH
Q 012411 287 YGYFHADPHPGNLLATPEGKLAFLDFGMMSETPE 320 (464)
Q Consensus 287 ~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l~~ 320 (464)
..+.|.|+.++|||.+. +.+.||||-.++.-.+
T Consensus 284 ~VfCHNDl~~~NiL~~~-~~l~LIDfEYAg~ndp 316 (442)
T PTZ00296 284 IVFCHNDLQENNIINTN-KCLRLIDFEYSGYNFL 316 (442)
T ss_pred eeEEeCCCCccceeecC-CCEEEEeecccccccH
Confidence 35799999999998754 4499999998886544
No 499
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=94.56 E-value=0.006 Score=67.12 Aligned_cols=146 Identities=17% Similarity=0.112 Sum_probs=86.2
Q ss_pred CCceEEEeeecCcccCcHHHHHh-cCCCHHHHHHHHHHHHHHHHHHCCcccCCCCCcceEEccCCcEEEEecCCCCcC--
Q 012411 242 SGKVLTMEWVEGVKLNEQVAIES-QGLKVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPEGKLAFLDFGMMSET-- 318 (464)
Q Consensus 242 ~~~~LvmE~~~G~~L~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dlkp~Nili~~~g~i~l~DFGl~~~l-- 318 (464)
+..+|+|+|..|+.+......-. ......+.....+....++||...+.|+|++|.|+++..+|...+.|||.....
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccc
Confidence 56689999999988876533211 112233444444556789999999999999999999999999999999843221
Q ss_pred -C------------------HHHHHHHHHH----HHHHHhcCHHHHHHHHHHcCCCCCCCCcchHHHHHHHHHHHhccCC
Q 012411 319 -P------------------EEARFAIIGH----VVHMVNRDYEAMARDYYALDFLSPDVDVTPIVPALRNFFDDALNSS 375 (464)
Q Consensus 319 -~------------------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~D~~sl~~~l~~~~~~~~~~~ 375 (464)
+ ...+...... .-....+++..++++..-...-....|.|+.|.++.+.+.+. .+
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~--pp 1034 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI--PP 1034 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC--CC
Confidence 0 0000000000 001122333334443322222345679999999998888743 44
Q ss_pred CCcCcHHHHHHHHH
Q 012411 376 VSELNFKTIVDGLG 389 (464)
Q Consensus 376 ~~~~~~~~~~~~l~ 389 (464)
+....-+.+++.+.
T Consensus 1035 ~na~tpq~~f~ni~ 1048 (1205)
T KOG0606|consen 1035 FNAETPQQIFENIL 1048 (1205)
T ss_pred CCCcchhhhhhccc
Confidence 44444444454443
No 500
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=94.50 E-value=0.1 Score=50.78 Aligned_cols=88 Identities=17% Similarity=0.227 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHhCCCCCEEeceeeccCCCCceEEEeeecCcccCcHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHC-
Q 012411 214 EGQNARRFKKLYADKEDVLVPDIFWDYTSGKVLTMEWVEGVKLNEQVAIESQG-----LKVLDLVNTGIQCSLRQLLEY- 287 (464)
Q Consensus 214 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~~LvmE~~~G~~L~~~~~~~~~~-----~~~~~~~~~~i~~~l~~lh~~- 287 (464)
.+.|+.+|.+...+.+.-.+|++ ++..||++.+++....+..... ....+....+|.+++.|||+.
T Consensus 125 vHsnlvkfH~yw~d~K~~e~~rv--------iFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~ 196 (458)
T KOG1266|consen 125 VHSNLVKFHKYWTDKKYEEKPRV--------IFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD 196 (458)
T ss_pred HHHHHHHHHHhhcccccccccce--------EEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC
Confidence 46788888888777665444444 4899999999998865432211 222344557888999999986
Q ss_pred -CcccCCCCCcceEEccCCcEEE
Q 012411 288 -GYFHADPHPGNLLATPEGKLAF 309 (464)
Q Consensus 288 -gi~H~Dlkp~Nili~~~g~i~l 309 (464)
-++|+.+...-|++.++|-|++
T Consensus 197 PpiihgnlTc~tifiq~ngLIki 219 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKI 219 (458)
T ss_pred CccccCCcchhheeecCCceEEe
Confidence 4999999999999998886664
Done!