Query 012412
Match_columns 464
No_of_seqs 123 out of 1286
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 08:56:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012412.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012412hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.2E-66 1.8E-70 508.6 36.8 433 8-458 8-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1E-60 3.5E-65 480.6 38.6 446 11-461 6-481 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 1.8E-58 6.3E-63 462.6 43.9 430 10-459 3-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.2E-59 7.4E-64 466.3 35.9 435 10-461 4-454 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.2E-56 4E-61 447.9 37.4 424 12-458 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.5E-44 5.1E-49 358.8 30.9 396 9-458 8-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.5E-44 8.6E-49 354.4 24.8 361 11-457 20-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 8.5E-42 2.9E-46 337.8 24.8 373 14-459 1-400 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 2.9E-40 9.9E-45 327.0 32.9 360 11-438 18-397 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 8.2E-41 2.8E-45 330.9 25.6 356 14-438 1-385 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 2.1E-39 7.2E-44 319.4 35.1 374 12-458 3-397 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 2.5E-40 8.5E-45 325.8 23.8 363 14-459 1-382 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.1E-39 3.8E-44 325.2 27.3 376 9-459 16-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 8.7E-39 3E-43 317.9 28.7 366 11-439 5-384 (430)
15 2p6p_A Glycosyl transferase; X 100.0 4.9E-38 1.7E-42 307.8 27.0 357 14-457 1-378 (384)
16 4fzr_A SSFS6; structural genom 100.0 3.1E-38 1.1E-42 310.7 20.8 345 9-438 11-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.9E-36 6.5E-41 297.9 27.2 353 11-458 18-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 4.5E-35 1.5E-39 287.5 28.2 354 13-459 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1.8E-33 6.3E-38 277.9 28.4 359 10-458 17-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.3E-30 4.6E-35 252.3 25.9 305 15-420 4-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 3.5E-27 1.2E-31 203.2 17.5 159 264-438 7-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 9.2E-21 3.2E-25 183.5 27.2 312 14-431 7-332 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.8 3.4E-17 1.2E-21 150.5 18.7 117 277-402 156-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.7 1.6E-16 5.6E-21 140.0 10.2 133 276-416 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.7 5.8E-14 2E-18 139.1 28.6 384 7-461 14-429 (438)
26 3fro_A GLGA glycogen synthase; 99.6 1.5E-12 5.2E-17 128.6 28.0 368 12-433 1-411 (439)
27 3okp_A GDP-mannose-dependent a 99.5 1.2E-12 4E-17 127.6 24.5 314 12-420 3-345 (394)
28 2gek_A Phosphatidylinositol ma 99.5 5E-13 1.7E-17 130.8 21.6 314 10-420 17-350 (406)
29 1v4v_A UDP-N-acetylglucosamine 99.5 8.7E-13 3E-17 127.9 18.2 131 277-420 197-335 (376)
30 2r60_A Glycosyl transferase, g 99.5 9.8E-12 3.3E-16 125.3 24.7 133 279-420 262-425 (499)
31 3ot5_A UDP-N-acetylglucosamine 99.5 1.1E-12 3.8E-17 128.0 16.5 132 277-420 223-362 (403)
32 3dzc_A UDP-N-acetylglucosamine 99.4 4.7E-13 1.6E-17 130.5 12.9 132 277-420 229-368 (396)
33 1vgv_A UDP-N-acetylglucosamine 99.4 4E-12 1.4E-16 123.5 18.4 132 277-420 204-343 (384)
34 2iw1_A Lipopolysaccharide core 99.4 1.6E-11 5.4E-16 118.7 21.7 141 268-420 186-338 (374)
35 2jjm_A Glycosyl transferase, g 99.4 1.1E-10 3.9E-15 113.6 26.5 323 13-420 15-351 (394)
36 3beo_A UDP-N-acetylglucosamine 99.3 2.2E-10 7.4E-15 110.8 23.5 132 277-420 204-343 (375)
37 2iuy_A Avigt4, glycosyltransfe 99.3 1.9E-11 6.4E-16 116.8 15.7 125 281-418 164-307 (342)
38 2x6q_A Trehalose-synthase TRET 99.3 2.5E-10 8.4E-15 112.1 21.2 134 278-420 230-380 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.2 1.1E-10 3.8E-15 112.9 11.2 318 12-420 8-343 (385)
40 3s28_A Sucrose synthase 1; gly 99.1 2.9E-09 1E-13 111.5 20.0 134 278-420 571-735 (816)
41 1rzu_A Glycogen synthase 1; gl 99.1 2.8E-08 9.5E-13 99.5 25.6 133 279-420 291-444 (485)
42 2qzs_A Glycogen synthase; glyc 99.0 3.1E-07 1.1E-11 91.8 30.1 135 278-420 291-445 (485)
43 2hy7_A Glucuronosyltransferase 99.0 2E-07 6.7E-12 91.0 25.3 114 280-420 223-353 (406)
44 3oy2_A Glycosyltransferase B73 98.9 2.4E-07 8.2E-12 90.5 24.4 133 278-420 183-356 (413)
45 2f9f_A First mannosyl transfer 98.9 9.5E-09 3.3E-13 88.0 10.3 130 280-420 24-163 (177)
46 2xci_A KDO-transferase, 3-deox 98.6 9.3E-06 3.2E-10 78.1 23.5 99 334-437 260-364 (374)
47 2x0d_A WSAF; GT4 family, trans 98.6 1.4E-06 4.7E-11 85.1 16.1 81 332-420 293-380 (413)
48 3vue_A GBSS-I, granule-bound s 98.4 0.00042 1.4E-08 69.8 28.6 132 278-418 326-476 (536)
49 3qhp_A Type 1 capsular polysac 98.3 3.4E-06 1.2E-10 70.9 9.5 141 279-433 2-155 (166)
50 2vsy_A XCC0866; transferase, g 98.2 3.7E-05 1.3E-09 78.3 18.3 134 280-420 378-523 (568)
51 2bfw_A GLGA glycogen synthase; 98.2 3.3E-05 1.1E-09 66.9 14.7 131 280-420 37-182 (200)
52 1psw_A ADP-heptose LPS heptosy 98.1 0.00058 2E-08 64.7 21.2 103 14-139 1-106 (348)
53 3q3e_A HMW1C-like glycosyltran 98.0 7.5E-05 2.6E-09 74.9 14.5 139 278-420 440-589 (631)
54 3rhz_A GTF3, nucleotide sugar 97.9 2.9E-05 1E-09 73.2 9.5 147 279-458 178-338 (339)
55 3tov_A Glycosyl transferase fa 97.9 0.00068 2.3E-08 64.3 18.9 306 11-419 6-347 (349)
56 4gyw_A UDP-N-acetylglucosamine 97.9 0.00052 1.8E-08 71.6 19.2 141 276-420 520-669 (723)
57 2gt1_A Lipopolysaccharide hept 97.3 0.0055 1.9E-07 57.3 15.4 131 277-420 177-323 (326)
58 2phj_A 5'-nucleotidase SURE; S 94.8 0.29 9.8E-06 43.2 11.3 114 13-143 1-128 (251)
59 3ty2_A 5'-nucleotidase SURE; s 94.7 0.082 2.8E-06 46.8 7.4 117 8-143 6-136 (261)
60 3t5t_A Putative glycosyltransf 93.9 0.89 3E-05 44.6 13.6 111 335-460 353-473 (496)
61 2wqk_A 5'-nucleotidase SURE; S 93.2 1 3.5E-05 39.9 11.7 114 13-143 1-128 (251)
62 2e6c_A 5'-nucleotidase SURE; S 92.6 1.3 4.6E-05 38.8 11.5 112 14-142 1-129 (244)
63 2iz6_A Molybdenum cofactor car 92.5 2.3 7.9E-05 35.3 12.3 133 266-418 35-173 (176)
64 1j9j_A Stationary phase surviV 92.4 1.2 4.1E-05 39.2 10.9 114 14-142 1-128 (247)
65 1uqt_A Alpha, alpha-trehalose- 92.4 0.78 2.7E-05 45.1 10.8 108 335-460 332-454 (482)
66 1l5x_A SurviVal protein E; str 91.3 2.1 7.3E-05 38.4 11.4 113 14-143 1-128 (280)
67 3nb0_A Glycogen [starch] synth 89.8 1.2 4E-05 45.4 9.1 77 334-417 490-592 (725)
68 2v4n_A Multifunctional protein 88.5 3 0.0001 36.8 9.9 110 14-142 2-126 (254)
69 3l7i_A Teichoic acid biosynthe 88.0 0.42 1.5E-05 49.8 4.9 148 296-460 566-721 (729)
70 1g5t_A COB(I)alamin adenosyltr 86.5 4.7 0.00016 34.0 9.6 98 13-124 28-131 (196)
71 2vqe_B 30S ribosomal protein S 82.6 8.5 0.00029 33.8 9.7 114 29-144 53-191 (256)
72 3igf_A ALL4481 protein; two-do 81.4 1.5 5E-05 41.4 4.8 37 13-49 1-38 (374)
73 1xmp_A PURE, phosphoribosylami 78.0 24 0.00081 28.7 10.1 142 277-442 10-165 (170)
74 2yxb_A Coenzyme B12-dependent 77.6 5.2 0.00018 32.6 6.4 43 12-54 17-59 (161)
75 3lqk_A Dipicolinate synthase s 77.1 3.6 0.00012 34.9 5.5 46 11-57 5-51 (201)
76 3vot_A L-amino acid ligase, BL 75.9 13 0.00043 35.6 9.8 94 14-137 6-101 (425)
77 1mvl_A PPC decarboxylase athal 75.8 4.2 0.00014 34.7 5.5 45 11-57 17-61 (209)
78 1qzu_A Hypothetical protein MD 75.3 3.2 0.00011 35.4 4.7 52 5-57 11-63 (206)
79 3iqw_A Tail-anchored protein t 74.9 4.3 0.00015 37.6 5.9 39 13-51 15-54 (334)
80 1p3y_1 MRSD protein; flavoprot 74.7 2 6.9E-05 36.3 3.2 45 12-57 7-51 (194)
81 3qjg_A Epidermin biosynthesis 74.6 4.7 0.00016 33.3 5.4 43 14-57 6-48 (175)
82 1kjn_A MTH0777; hypotethical p 74.4 2.8 9.6E-05 33.2 3.6 47 11-57 4-52 (157)
83 3zqu_A Probable aromatic acid 74.1 3 0.0001 35.6 4.2 44 13-57 4-47 (209)
84 2i2x_B MTAC, methyltransferase 73.4 9.4 0.00032 33.8 7.5 46 11-56 121-166 (258)
85 3n7t_A Macrophage binding prot 73.2 6.6 0.00023 34.5 6.3 46 4-51 2-58 (247)
86 2r8r_A Sensor protein; KDPD, P 71.9 5.9 0.0002 34.3 5.5 41 11-51 4-44 (228)
87 4dzz_A Plasmid partitioning pr 71.7 11 0.00038 31.5 7.4 38 14-51 1-40 (206)
88 3ug7_A Arsenical pump-driving 71.6 11 0.00036 35.2 7.7 40 13-52 25-65 (349)
89 3bbn_B Ribosomal protein S2; s 71.6 6.9 0.00024 33.9 5.8 112 31-144 54-190 (231)
90 2q5c_A NTRC family transcripti 70.5 8.5 0.00029 32.4 6.2 109 25-144 36-170 (196)
91 1ydh_A AT5G11950; structural g 70.3 33 0.0011 29.2 9.9 136 266-415 31-186 (216)
92 1ccw_A Protein (glutamate muta 70.1 5.3 0.00018 31.5 4.5 44 13-56 3-46 (137)
93 3dfz_A SIRC, precorrin-2 dehyd 69.2 12 0.0004 32.3 6.9 143 276-439 30-186 (223)
94 2jzc_A UDP-N-acetylglucosamine 68.7 35 0.0012 29.3 9.8 40 14-53 28-74 (224)
95 4grd_A N5-CAIR mutase, phospho 68.6 29 0.00098 28.3 8.5 141 277-441 11-165 (173)
96 4b4o_A Epimerase family protei 68.1 5.5 0.00019 35.9 4.9 33 14-50 1-33 (298)
97 1sbz_A Probable aromatic acid 67.9 4.3 0.00015 34.3 3.7 43 14-57 1-44 (197)
98 2i2c_A Probable inorganic poly 67.5 5.1 0.00017 35.8 4.4 53 350-419 35-93 (272)
99 2f62_A Nucleoside 2-deoxyribos 67.3 17 0.00057 29.5 7.1 86 278-379 10-105 (161)
100 2ejb_A Probable aromatic acid 66.8 6.5 0.00022 33.0 4.6 43 14-57 2-44 (189)
101 1yt5_A Inorganic polyphosphate 65.2 5.2 0.00018 35.5 3.9 53 350-419 41-96 (258)
102 2b8t_A Thymidine kinase; deoxy 64.4 48 0.0016 28.4 9.9 40 12-51 10-50 (223)
103 1g63_A Epidermin modifying enz 63.8 7.3 0.00025 32.4 4.3 43 14-57 3-45 (181)
104 2a33_A Hypothetical protein; s 62.8 56 0.0019 27.8 9.9 102 266-380 35-147 (215)
105 3mc3_A DSRE/DSRF-like family p 62.5 14 0.00047 28.8 5.6 45 13-57 15-62 (134)
106 4fyk_A Deoxyribonucleoside 5'- 62.3 20 0.00069 28.7 6.5 123 280-419 4-142 (152)
107 3tov_A Glycosyl transferase fa 61.9 17 0.0006 33.6 7.1 100 15-144 187-290 (349)
108 3l4e_A Uncharacterized peptida 61.8 27 0.00093 29.5 7.7 49 265-313 15-63 (206)
109 3dfu_A Uncharacterized protein 61.4 43 0.0015 28.9 9.0 34 12-50 5-38 (232)
110 3kvo_A Hydroxysteroid dehydrog 60.8 22 0.00077 32.8 7.7 34 15-51 46-79 (346)
111 1qkk_A DCTD, C4-dicarboxylate 60.6 57 0.0019 25.3 13.2 108 290-420 10-122 (155)
112 3auf_A Glycinamide ribonucleot 60.4 28 0.00097 30.0 7.7 110 11-143 20-132 (229)
113 1t35_A Hypothetical protein YV 60.1 57 0.0019 27.1 9.3 103 265-380 22-135 (191)
114 4dim_A Phosphoribosylglycinami 60.1 34 0.0012 32.2 9.0 34 12-50 6-39 (403)
115 2rjn_A Response regulator rece 60.1 25 0.00087 27.4 7.0 108 290-420 14-127 (154)
116 1y80_A Predicted cobalamin bin 58.9 11 0.00038 32.1 4.8 45 12-56 87-131 (210)
117 1psw_A ADP-heptose LPS heptosy 58.8 41 0.0014 30.7 9.2 40 15-54 182-226 (348)
118 1o4v_A Phosphoribosylaminoimid 57.8 78 0.0027 26.0 12.0 139 277-439 12-162 (183)
119 2gk4_A Conserved hypothetical 57.5 23 0.00079 30.6 6.5 27 24-52 28-54 (232)
120 3mcu_A Dipicolinate synthase, 57.3 11 0.00038 32.0 4.4 43 13-56 5-48 (207)
121 3czc_A RMPB; alpha/beta sandwi 56.3 11 0.00037 28.3 3.8 43 4-46 9-53 (110)
122 3lp6_A Phosphoribosylaminoimid 55.8 82 0.0028 25.7 10.3 139 277-439 6-156 (174)
123 1jx7_A Hypothetical protein YC 55.8 20 0.00068 26.8 5.4 44 14-57 2-50 (117)
124 3grc_A Sensor protein, kinase; 55.5 62 0.0021 24.4 8.5 108 290-419 13-127 (140)
125 2hy5_A Putative sulfurtransfer 55.4 36 0.0012 26.2 6.9 44 14-57 1-48 (130)
126 2d1p_A TUSD, hypothetical UPF0 55.3 44 0.0015 26.3 7.3 45 13-57 12-60 (140)
127 4egb_A DTDP-glucose 4,6-dehydr 54.7 49 0.0017 30.1 9.0 37 9-49 20-58 (346)
128 3tpc_A Short chain alcohol deh 54.7 41 0.0014 29.2 8.1 33 15-50 8-40 (257)
129 3s40_A Diacylglycerol kinase; 54.6 32 0.0011 31.1 7.4 80 280-380 12-97 (304)
130 3llv_A Exopolyphosphatase-rela 54.6 7.5 0.00026 30.4 2.8 35 12-51 5-39 (141)
131 1u0t_A Inorganic polyphosphate 54.2 8.1 0.00028 35.2 3.3 56 347-419 72-131 (307)
132 3zzm_A Bifunctional purine bio 54.0 48 0.0016 32.2 8.5 96 14-122 10-111 (523)
133 1rcu_A Conserved hypothetical 53.4 98 0.0034 25.8 10.3 97 265-380 47-150 (195)
134 3qua_A Putative uncharacterize 53.4 93 0.0032 26.0 9.5 100 266-379 43-154 (199)
135 3slg_A PBGP3 protein; structur 53.3 17 0.00059 33.7 5.6 43 5-51 16-59 (372)
136 3ezx_A MMCP 1, monomethylamine 52.9 17 0.0006 31.0 5.0 46 11-56 90-135 (215)
137 1lss_A TRK system potassium up 52.8 17 0.00059 27.9 4.7 33 13-50 4-36 (140)
138 1p9o_A Phosphopantothenoylcyst 52.8 11 0.00037 34.4 3.8 24 29-52 67-90 (313)
139 1u11_A PURE (N5-carboxyaminoim 52.7 95 0.0033 25.5 10.0 139 278-440 21-173 (182)
140 4b4k_A N5-carboxyaminoimidazol 52.7 95 0.0032 25.4 11.5 137 278-441 22-175 (181)
141 3ucx_A Short chain dehydrogena 52.6 41 0.0014 29.4 7.7 33 15-50 12-44 (264)
142 2g1u_A Hypothetical protein TM 52.6 16 0.00055 29.1 4.6 36 10-50 16-51 (155)
143 3bgw_A DNAB-like replicative h 52.6 26 0.00089 33.7 6.8 42 15-56 199-240 (444)
144 3lyu_A Putative hydrogenase; t 52.4 20 0.00067 28.2 4.9 38 13-53 18-55 (142)
145 3mjf_A Phosphoribosylamine--gl 52.3 21 0.00073 34.2 6.1 26 12-42 2-27 (431)
146 3sxp_A ADP-L-glycero-D-mannohe 52.2 1.3E+02 0.0045 27.4 11.6 37 10-50 7-45 (362)
147 1id1_A Putative potassium chan 52.2 11 0.00038 29.9 3.5 33 13-50 3-35 (153)
148 3kjh_A CO dehydrogenase/acetyl 52.1 9.9 0.00034 32.9 3.5 38 14-51 1-38 (254)
149 2vo1_A CTP synthase 1; pyrimid 51.9 15 0.00051 32.4 4.3 46 9-54 18-66 (295)
150 3kuu_A Phosphoribosylaminoimid 51.4 98 0.0033 25.2 10.1 142 278-443 12-167 (174)
151 3dhn_A NAD-dependent epimerase 51.3 25 0.00086 29.7 5.9 35 13-51 4-38 (227)
152 4egf_A L-xylulose reductase; s 51.2 37 0.0013 29.8 7.2 33 15-50 21-53 (266)
153 2khz_A C-MYC-responsive protei 51.1 41 0.0014 27.3 6.8 129 277-418 10-150 (165)
154 4gi5_A Quinone reductase; prot 51.1 24 0.0008 31.6 5.7 38 10-47 19-59 (280)
155 2a33_A Hypothetical protein; s 50.9 24 0.00082 30.1 5.5 50 1-50 1-54 (215)
156 2gkg_A Response regulator homo 50.8 63 0.0021 23.6 7.7 46 371-419 79-125 (127)
157 2ywr_A Phosphoribosylglycinami 50.8 26 0.0009 29.9 5.8 34 13-49 1-36 (216)
158 2p90_A Hypothetical protein CG 50.7 1.5E+02 0.005 27.0 11.3 133 277-419 101-251 (319)
159 2a5l_A Trp repressor binding p 50.1 20 0.00068 29.8 5.0 39 12-50 4-43 (200)
160 3of5_A Dethiobiotin synthetase 49.5 17 0.00057 31.4 4.4 35 14-48 4-40 (228)
161 2pju_A Propionate catabolism o 49.4 79 0.0027 27.1 8.6 109 25-142 46-180 (225)
162 3pdi_B Nitrogenase MOFE cofact 49.3 1.1E+02 0.0038 29.4 10.6 86 14-140 314-399 (458)
163 2qxy_A Response regulator; reg 48.8 82 0.0028 23.7 8.2 108 290-420 11-122 (142)
164 2lnd_A De novo designed protei 48.5 24 0.00083 24.3 4.0 48 370-418 49-100 (112)
165 4g81_D Putative hexonate dehyd 48.4 46 0.0016 29.2 7.2 82 15-121 10-94 (255)
166 3lrx_A Putative hydrogenase; a 48.4 23 0.00079 28.4 4.9 39 13-54 23-61 (158)
167 3tsc_A Putative oxidoreductase 48.1 31 0.001 30.5 6.1 32 15-49 12-43 (277)
168 4eg0_A D-alanine--D-alanine li 48.0 27 0.00093 31.6 5.9 47 4-50 2-54 (317)
169 2qv7_A Diacylglycerol kinase D 48.0 39 0.0013 31.0 7.0 81 280-380 28-114 (337)
170 3uve_A Carveol dehydrogenase ( 47.9 48 0.0016 29.4 7.4 32 15-49 12-43 (286)
171 3kkl_A Probable chaperone prot 47.8 32 0.0011 30.0 6.0 39 13-51 3-52 (244)
172 3eag_A UDP-N-acetylmuramate:L- 47.6 19 0.00063 33.1 4.6 34 12-49 3-36 (326)
173 3nrc_A Enoyl-[acyl-carrier-pro 47.5 54 0.0018 28.9 7.7 35 15-51 27-62 (280)
174 3m1a_A Putative dehydrogenase; 47.2 31 0.001 30.5 6.0 33 15-50 6-38 (281)
175 3p19_A BFPVVD8, putative blue 47.2 33 0.0011 30.1 6.2 34 14-50 16-49 (266)
176 3fgn_A Dethiobiotin synthetase 47.2 20 0.00068 31.5 4.6 38 11-48 23-62 (251)
177 1ydg_A Trp repressor binding p 46.9 24 0.00084 29.6 5.1 39 11-49 4-43 (211)
178 1eiw_A Hypothetical protein MT 46.9 21 0.00071 26.9 4.0 65 348-418 36-109 (111)
179 3t7c_A Carveol dehydrogenase; 45.3 45 0.0015 29.8 6.9 33 15-50 29-61 (299)
180 3pgx_A Carveol dehydrogenase; 45.2 47 0.0016 29.3 6.9 32 15-49 16-47 (280)
181 2an1_A Putative kinase; struct 45.0 12 0.00042 33.7 2.9 32 346-379 59-94 (292)
182 3h4t_A Glycosyltransferase GTF 44.8 1.2E+02 0.004 28.4 10.0 88 15-140 222-310 (404)
183 3qxc_A Dethiobiotin synthetase 44.7 21 0.0007 31.2 4.2 37 12-48 19-57 (242)
184 4h15_A Short chain alcohol deh 44.4 64 0.0022 28.3 7.5 33 15-50 12-44 (261)
185 3r8n_B 30S ribosomal protein S 44.3 50 0.0017 28.2 6.4 118 24-144 39-182 (218)
186 3tl4_X Glutaminyl-tRNA synthet 44.1 17 0.00057 30.3 3.3 74 383-461 100-181 (187)
187 3sc4_A Short chain dehydrogena 44.1 34 0.0012 30.4 5.8 34 15-51 10-43 (285)
188 3qjg_A Epidermin biosynthesis 44.0 80 0.0028 25.8 7.5 114 279-399 7-143 (175)
189 3f6r_A Flavodoxin; FMN binding 43.9 24 0.00082 27.7 4.3 38 14-51 2-40 (148)
190 3sbx_A Putative uncharacterize 43.7 1.4E+02 0.0047 24.7 9.8 100 266-379 34-145 (189)
191 3e8x_A Putative NAD-dependent 43.2 30 0.001 29.5 5.2 38 10-51 18-55 (236)
192 3afo_A NADH kinase POS5; alpha 42.5 23 0.00079 33.3 4.4 60 343-419 107-171 (388)
193 3oti_A CALG3; calicheamicin, T 42.4 1.7E+02 0.0058 27.0 10.8 90 14-140 232-325 (398)
194 3av3_A Phosphoribosylglycinami 42.0 63 0.0021 27.4 6.8 108 13-143 3-113 (212)
195 4hb9_A Similarities with proba 41.9 17 0.00059 34.0 3.6 32 13-49 1-32 (412)
196 3vtz_A Glucose 1-dehydrogenase 41.9 96 0.0033 27.1 8.4 35 13-50 13-47 (269)
197 3rpe_A MDAB, modulator of drug 41.6 29 0.00099 29.7 4.6 41 9-49 21-68 (218)
198 2bon_A Lipid kinase; DAG kinas 41.6 60 0.0021 29.6 7.2 78 280-380 33-118 (332)
199 4dmm_A 3-oxoacyl-[acyl-carrier 41.5 48 0.0016 29.1 6.3 33 14-49 28-60 (269)
200 3e48_A Putative nucleoside-dip 41.5 1.8E+02 0.0061 25.3 11.0 50 14-71 1-52 (289)
201 4gkb_A 3-oxoacyl-[acyl-carrier 41.5 20 0.00068 31.6 3.7 34 15-51 8-41 (258)
202 1y1p_A ARII, aldehyde reductas 41.5 36 0.0012 30.8 5.7 41 6-50 4-44 (342)
203 3ghy_A Ketopantoate reductase 41.4 12 0.0004 34.6 2.2 47 13-68 3-49 (335)
204 2hy5_B Intracellular sulfur ox 41.3 72 0.0025 24.8 6.5 43 15-57 7-52 (136)
205 3h7a_A Short chain dehydrogena 41.3 76 0.0026 27.4 7.5 33 15-50 8-40 (252)
206 2xj4_A MIPZ; replication, cell 41.2 28 0.00094 31.1 4.7 39 13-51 3-43 (286)
207 1wek_A Hypothetical protein TT 40.8 1.5E+02 0.0052 25.1 9.0 101 265-380 58-170 (217)
208 4fn4_A Short chain dehydrogena 40.5 48 0.0016 29.1 6.0 33 15-50 8-40 (254)
209 3evn_A Oxidoreductase, GFO/IDH 40.5 1.6E+02 0.0056 26.4 10.0 121 279-418 7-141 (329)
210 3s2u_A UDP-N-acetylglucosamine 40.4 32 0.0011 31.9 5.2 26 350-377 92-120 (365)
211 2zki_A 199AA long hypothetical 40.2 27 0.00093 29.0 4.2 37 13-50 4-41 (199)
212 3vps_A TUNA, NAD-dependent epi 40.0 18 0.00061 32.6 3.3 37 11-51 5-41 (321)
213 3ged_A Short-chain dehydrogena 40.0 51 0.0017 28.7 6.0 33 15-50 3-35 (247)
214 3h2s_A Putative NADH-flavin re 39.9 28 0.00096 29.3 4.4 34 14-51 1-34 (224)
215 1e2b_A Enzyme IIB-cellobiose; 39.6 52 0.0018 24.3 5.2 38 12-49 2-39 (106)
216 3trh_A Phosphoribosylaminoimid 39.6 1.5E+02 0.0052 24.0 11.2 138 278-439 6-157 (169)
217 3gl9_A Response regulator; bet 39.5 1.1E+02 0.0037 22.4 10.2 106 290-418 9-121 (122)
218 2q6t_A DNAB replication FORK h 39.3 43 0.0015 32.1 6.0 39 16-54 203-242 (444)
219 4iin_A 3-ketoacyl-acyl carrier 39.3 44 0.0015 29.3 5.7 32 15-49 30-61 (271)
220 3ew7_A LMO0794 protein; Q8Y8U8 39.3 29 0.001 29.1 4.4 34 14-51 1-34 (221)
221 2d1p_B TUSC, hypothetical UPF0 39.1 51 0.0018 24.8 5.3 43 15-57 3-48 (119)
222 3ijr_A Oxidoreductase, short c 39.1 65 0.0022 28.6 6.9 33 15-50 48-80 (291)
223 3rfo_A Methionyl-tRNA formyltr 38.9 35 0.0012 31.1 5.0 36 11-51 2-37 (317)
224 3v2h_A D-beta-hydroxybutyrate 38.8 47 0.0016 29.4 5.9 32 15-49 26-57 (281)
225 3osu_A 3-oxoacyl-[acyl-carrier 38.4 54 0.0019 28.2 6.1 32 15-49 5-36 (246)
226 1jkx_A GART;, phosphoribosylgl 38.3 86 0.0029 26.5 7.1 107 14-144 1-111 (212)
227 2l2q_A PTS system, cellobiose- 38.2 40 0.0014 25.0 4.4 34 13-46 4-37 (109)
228 3gpi_A NAD-dependent epimerase 38.0 35 0.0012 30.1 4.9 33 13-50 3-35 (286)
229 4da9_A Short-chain dehydrogena 37.7 80 0.0027 27.8 7.2 32 15-49 30-61 (280)
230 4gmf_A Yersiniabactin biosynth 37.6 1.1E+02 0.0039 28.3 8.5 108 278-402 8-125 (372)
231 2q62_A ARSH; alpha/beta, flavo 37.5 48 0.0016 28.9 5.5 41 9-49 30-73 (247)
232 3to5_A CHEY homolog; alpha(5)b 37.5 1.4E+02 0.0047 22.9 9.4 107 290-418 19-132 (134)
233 3qvl_A Putative hydantoin race 37.4 98 0.0033 26.9 7.5 37 14-50 2-39 (245)
234 3s55_A Putative short-chain de 37.4 55 0.0019 28.8 6.0 33 15-50 11-43 (281)
235 2r6j_A Eugenol synthase 1; phe 37.1 31 0.0011 31.0 4.4 42 6-51 3-45 (318)
236 3hn2_A 2-dehydropantoate 2-red 37.0 27 0.00092 31.7 3.9 46 14-69 3-48 (312)
237 4b79_A PA4098, probable short- 36.9 1.2E+02 0.0041 26.3 7.9 33 15-50 12-44 (242)
238 3ahc_A Phosphoketolase, xylulo 36.8 2.8E+02 0.0094 29.0 11.6 81 356-444 727-812 (845)
239 1tvm_A PTS system, galactitol- 36.7 74 0.0025 23.7 5.7 41 8-48 16-57 (113)
240 2vsy_A XCC0866; transferase, g 36.5 41 0.0014 33.2 5.5 41 10-50 202-246 (568)
241 4dll_A 2-hydroxy-3-oxopropiona 36.4 40 0.0014 30.7 5.0 35 11-50 29-63 (320)
242 2pju_A Propionate catabolism o 36.2 31 0.001 29.7 3.9 30 350-382 63-92 (225)
243 1gsa_A Glutathione synthetase; 36.1 35 0.0012 30.5 4.6 37 14-50 2-41 (316)
244 3pxx_A Carveol dehydrogenase; 36.0 72 0.0025 28.0 6.7 33 15-50 11-43 (287)
245 1p3y_1 MRSD protein; flavoprot 35.8 1.1E+02 0.0037 25.5 7.2 134 279-419 10-186 (194)
246 1cp2_A CP2, nitrogenase iron p 35.7 36 0.0012 29.8 4.5 36 15-50 3-38 (269)
247 2ew2_A 2-dehydropantoate 2-red 35.5 25 0.00086 31.6 3.5 33 13-50 3-35 (316)
248 1q57_A DNA primase/helicase; d 35.5 62 0.0021 31.6 6.5 41 16-56 245-286 (503)
249 3lqk_A Dipicolinate synthase s 35.4 1.9E+02 0.0064 24.2 8.6 50 369-419 120-186 (201)
250 3ih5_A Electron transfer flavo 35.3 25 0.00085 30.1 3.2 109 13-140 3-121 (217)
251 1rw7_A YDR533CP; alpha-beta sa 35.3 69 0.0024 27.6 6.2 39 13-51 3-52 (243)
252 3ksu_A 3-oxoacyl-acyl carrier 35.2 1.3E+02 0.0044 26.1 8.1 32 15-49 12-43 (262)
253 2b69_A UDP-glucuronate decarbo 35.2 35 0.0012 31.1 4.5 38 9-50 23-60 (343)
254 3un1_A Probable oxidoreductase 35.1 78 0.0027 27.5 6.6 33 15-50 29-61 (260)
255 3c1o_A Eugenol synthase; pheny 35.0 38 0.0013 30.5 4.6 35 13-51 4-38 (321)
256 2h31_A Multifunctional protein 34.9 3E+02 0.01 26.1 11.1 137 277-438 264-411 (425)
257 3dqp_A Oxidoreductase YLBE; al 34.7 33 0.0011 28.9 3.9 34 14-51 1-34 (219)
258 3dfi_A Pseudoaglycone deacetyl 34.7 44 0.0015 29.6 4.8 42 8-49 2-43 (270)
259 3g0o_A 3-hydroxyisobutyrate de 34.6 22 0.00074 32.1 2.9 35 11-50 5-39 (303)
260 4edh_A DTMP kinase, thymidylat 34.4 77 0.0026 26.8 6.2 39 12-50 5-43 (213)
261 2ark_A Flavodoxin; FMN, struct 34.4 45 0.0015 27.4 4.7 38 13-50 4-43 (188)
262 4eue_A Putative reductase CA_C 34.3 65 0.0022 30.6 6.2 37 13-50 59-95 (418)
263 2qs7_A Uncharacterized protein 34.3 50 0.0017 25.9 4.6 43 15-57 9-52 (144)
264 1pjq_A CYSG, siroheme synthase 34.2 2E+02 0.0069 27.5 9.9 146 277-439 12-168 (457)
265 3nbm_A PTS system, lactose-spe 34.2 38 0.0013 25.2 3.7 40 9-48 2-41 (108)
266 2q5c_A NTRC family transcripti 34.1 25 0.00086 29.5 3.0 31 349-382 50-80 (196)
267 3tox_A Short chain dehydrogena 34.1 97 0.0033 27.3 7.1 33 15-50 9-41 (280)
268 3ppi_A 3-hydroxyacyl-COA dehyd 34.1 49 0.0017 29.2 5.1 34 14-50 30-63 (281)
269 2c5m_A CTP synthase; cytidine 33.9 28 0.00094 30.5 3.1 42 12-53 21-65 (294)
270 3snk_A Response regulator CHEY 33.8 1.4E+02 0.0049 22.1 8.9 108 290-419 21-133 (135)
271 3f2v_A General stress protein 33.6 32 0.0011 28.8 3.5 36 13-48 1-37 (192)
272 3v8b_A Putative dehydrogenase, 33.5 93 0.0032 27.5 6.9 33 15-50 29-61 (283)
273 1vhq_A Enhancing lycopene bios 33.5 80 0.0027 27.0 6.3 42 10-52 3-49 (232)
274 2r85_A PURP protein PF1517; AT 33.4 38 0.0013 30.7 4.4 33 14-52 3-35 (334)
275 2x4g_A Nucleoside-diphosphate- 33.4 40 0.0014 30.5 4.6 35 12-50 12-46 (342)
276 1jzt_A Hypothetical 27.5 kDa p 33.3 31 0.0011 30.1 3.5 35 14-49 59-93 (246)
277 3doj_A AT3G25530, dehydrogenas 33.3 41 0.0014 30.4 4.5 36 10-50 18-53 (310)
278 3d3j_A Enhancer of mRNA-decapp 33.3 32 0.0011 31.2 3.7 36 14-50 133-168 (306)
279 3kbq_A Protein TA0487; structu 33.2 38 0.0013 27.7 3.8 82 280-381 6-98 (172)
280 3ius_A Uncharacterized conserv 33.2 37 0.0013 29.9 4.2 34 13-51 5-38 (286)
281 3euw_A MYO-inositol dehydrogen 33.0 2.1E+02 0.0072 25.9 9.5 120 279-418 6-139 (344)
282 3gdg_A Probable NADP-dependent 33.0 40 0.0014 29.4 4.3 34 15-50 21-55 (267)
283 1hdo_A Biliverdin IX beta redu 33.0 59 0.002 26.6 5.2 34 14-51 4-37 (206)
284 3d3k_A Enhancer of mRNA-decapp 32.8 33 0.0011 30.2 3.7 36 14-50 86-121 (259)
285 1g3q_A MIND ATPase, cell divis 32.8 47 0.0016 28.3 4.7 38 14-51 2-41 (237)
286 1qsg_A Enoyl-[acyl-carrier-pro 32.8 52 0.0018 28.7 5.0 34 15-50 10-44 (265)
287 2vrn_A Protease I, DR1199; cys 32.7 97 0.0033 25.3 6.5 40 11-51 7-46 (190)
288 3dff_A Teicoplanin pseudoaglyc 32.7 46 0.0016 29.6 4.6 40 10-49 4-43 (273)
289 1cyd_A Carbonyl reductase; sho 32.5 57 0.0019 27.8 5.2 36 11-50 5-40 (244)
290 3r6d_A NAD-dependent epimerase 32.4 44 0.0015 28.1 4.4 35 13-50 4-39 (221)
291 2hmt_A YUAA protein; RCK, KTN, 32.4 26 0.00088 27.0 2.6 33 13-50 6-38 (144)
292 3ehd_A Uncharacterized conserv 32.3 2E+02 0.0067 23.1 8.3 38 13-50 4-42 (162)
293 2afh_E Nitrogenase iron protei 32.3 46 0.0016 29.5 4.7 36 15-50 4-39 (289)
294 3i83_A 2-dehydropantoate 2-red 32.1 26 0.00089 31.9 3.0 46 14-69 3-48 (320)
295 3eya_A Pyruvate dehydrogenase 31.9 65 0.0022 31.9 6.1 28 350-379 66-99 (549)
296 3ic5_A Putative saccharopine d 31.9 39 0.0013 24.8 3.6 33 13-50 5-38 (118)
297 3b6i_A Flavoprotein WRBA; flav 31.8 54 0.0018 27.0 4.8 37 13-49 1-39 (198)
298 2j48_A Two-component sensor ki 31.7 1.4E+02 0.0046 21.1 7.4 44 371-419 74-118 (119)
299 3e9m_A Oxidoreductase, GFO/IDH 31.7 2.1E+02 0.007 25.8 9.1 123 279-418 7-141 (330)
300 2jk1_A HUPR, hydrogenase trans 31.6 99 0.0034 23.2 6.1 48 371-419 71-119 (139)
301 1v5e_A Pyruvate oxidase; oxido 31.4 54 0.0018 32.8 5.4 79 297-379 8-101 (590)
302 2r6a_A DNAB helicase, replicat 31.3 77 0.0026 30.4 6.4 40 15-54 205-245 (454)
303 3tqr_A Phosphoribosylglycinami 31.2 91 0.0031 26.5 6.0 118 10-174 2-120 (215)
304 3end_A Light-independent proto 31.1 50 0.0017 29.6 4.8 38 13-50 40-78 (307)
305 2fb6_A Conserved hypothetical 30.8 51 0.0017 24.9 3.9 41 14-54 8-52 (117)
306 3r6w_A FMN-dependent NADH-azor 30.7 39 0.0013 28.5 3.7 37 13-49 1-43 (212)
307 2o8n_A APOA-I binding protein; 30.6 45 0.0016 29.4 4.1 34 14-50 80-115 (265)
308 1dhr_A Dihydropteridine reduct 30.5 59 0.002 27.8 4.9 33 15-50 8-40 (241)
309 3fwz_A Inner membrane protein 30.4 38 0.0013 26.2 3.3 34 13-51 7-40 (140)
310 2q1w_A Putative nucleotide sug 30.2 47 0.0016 30.1 4.5 38 9-50 17-54 (333)
311 3db2_A Putative NADPH-dependen 30.2 2E+02 0.0067 26.3 8.8 121 279-419 7-141 (354)
312 4ibo_A Gluconate dehydrogenase 30.2 98 0.0034 27.1 6.5 32 15-49 27-58 (271)
313 3t6k_A Response regulator rece 30.1 1.7E+02 0.0058 21.8 10.6 108 290-420 11-125 (136)
314 3ea0_A ATPase, para family; al 30.1 49 0.0017 28.3 4.4 40 13-52 3-45 (245)
315 3gem_A Short chain dehydrogena 30.0 38 0.0013 29.6 3.6 34 15-51 28-61 (260)
316 2fwm_X 2,3-dihydro-2,3-dihydro 29.9 1.5E+02 0.0051 25.3 7.6 33 15-50 8-40 (250)
317 2yvq_A Carbamoyl-phosphate syn 29.9 79 0.0027 24.8 5.1 96 17-139 27-130 (143)
318 2ozl_B PDHE1-B, pyruvate dehyd 29.8 2.3E+02 0.008 25.8 9.1 111 277-418 216-340 (341)
319 2raf_A Putative dinucleotide-b 29.7 67 0.0023 26.9 5.0 48 13-71 19-66 (209)
320 1s2d_A Purine trans deoxyribos 29.7 1.7E+02 0.0059 23.5 7.2 32 346-379 77-116 (167)
321 2pzm_A Putative nucleotide sug 29.7 55 0.0019 29.6 4.8 36 11-50 18-53 (330)
322 3hwr_A 2-dehydropantoate 2-red 29.6 21 0.00073 32.5 1.9 41 12-57 18-58 (318)
323 3lyl_A 3-oxoacyl-(acyl-carrier 29.6 96 0.0033 26.4 6.2 33 15-50 6-38 (247)
324 3lq1_A 2-succinyl-5-enolpyruvy 29.5 96 0.0033 30.9 6.9 78 296-379 14-107 (578)
325 3oec_A Carveol dehydrogenase ( 29.3 88 0.003 28.2 6.1 32 15-49 47-78 (317)
326 1wcv_1 SOJ, segregation protei 29.2 42 0.0015 29.2 3.8 38 14-51 6-45 (257)
327 4ehi_A Bifunctional purine bio 29.2 39 0.0013 32.9 3.6 49 13-71 24-72 (534)
328 3eod_A Protein HNR; response r 29.1 1.7E+02 0.0057 21.4 9.2 109 290-420 14-127 (130)
329 1fy2_A Aspartyl dipeptidase; s 29.0 1.5E+02 0.0052 25.2 7.3 46 265-312 21-66 (229)
330 3bul_A Methionine synthase; tr 29.0 54 0.0018 32.7 4.7 46 12-57 97-142 (579)
331 3q9l_A Septum site-determining 29.0 50 0.0017 28.5 4.2 38 14-51 2-41 (260)
332 3kto_A Response regulator rece 28.9 1.8E+02 0.0061 21.6 8.9 107 290-419 13-126 (136)
333 3qlj_A Short chain dehydrogena 28.9 1.2E+02 0.0042 27.2 7.0 32 15-49 28-59 (322)
334 1bg6_A N-(1-D-carboxylethyl)-L 28.9 39 0.0013 31.1 3.6 33 13-50 4-36 (359)
335 3q2i_A Dehydrogenase; rossmann 28.9 2.8E+02 0.0096 25.2 9.6 122 278-419 14-150 (354)
336 3p0r_A Azoreductase; structura 28.8 56 0.0019 27.5 4.3 36 13-48 4-46 (211)
337 3da8_A Probable 5'-phosphoribo 28.6 1E+02 0.0034 26.2 5.8 116 8-174 7-126 (215)
338 2qx0_A 7,8-dihydro-6-hydroxyme 28.5 1E+02 0.0035 24.7 5.5 29 280-308 3-31 (159)
339 2pan_A Glyoxylate carboligase; 28.5 66 0.0023 32.3 5.5 25 355-379 94-124 (616)
340 3f67_A Putative dienelactone h 28.3 84 0.0029 26.1 5.6 36 14-49 32-67 (241)
341 2gt1_A Lipopolysaccharide hept 28.3 57 0.002 29.4 4.7 97 14-143 179-281 (326)
342 3hww_A 2-succinyl-5-enolpyruvy 28.2 84 0.0029 31.1 6.1 28 350-379 71-104 (556)
343 3zq6_A Putative arsenical pump 28.1 56 0.0019 29.7 4.5 38 14-51 14-52 (324)
344 1ks9_A KPA reductase;, 2-dehyd 28.0 47 0.0016 29.3 3.9 32 14-50 1-32 (291)
345 4fb5_A Probable oxidoreductase 28.0 1.8E+02 0.0062 26.7 8.3 131 279-419 27-169 (393)
346 1kjq_A GART 2, phosphoribosylg 27.9 63 0.0022 30.1 5.0 35 12-51 10-44 (391)
347 3u7i_A FMN-dependent NADH-azor 27.9 61 0.0021 27.6 4.5 38 11-48 2-48 (223)
348 3l6d_A Putative oxidoreductase 27.8 36 0.0012 30.8 3.1 35 10-49 6-40 (306)
349 1xp8_A RECA protein, recombina 27.8 60 0.002 30.2 4.7 39 16-54 77-115 (366)
350 4fgs_A Probable dehydrogenase 27.8 74 0.0025 28.2 5.1 33 15-50 30-62 (273)
351 2q2v_A Beta-D-hydroxybutyrate 27.8 95 0.0032 26.7 5.9 34 15-51 5-38 (255)
352 1f9y_A HPPK, protein (6-hydrox 27.8 80 0.0027 25.4 4.7 28 280-307 2-29 (158)
353 4e5v_A Putative THUA-like prot 27.7 71 0.0024 28.4 5.0 38 12-50 3-43 (281)
354 3l4b_C TRKA K+ channel protien 27.7 24 0.00083 29.9 1.8 33 14-51 1-33 (218)
355 3jte_A Response regulator rece 27.5 1.9E+02 0.0065 21.5 7.6 47 371-419 76-123 (143)
356 4g65_A TRK system potassium up 27.5 18 0.00061 35.1 1.0 61 348-413 298-365 (461)
357 3a28_C L-2.3-butanediol dehydr 27.5 77 0.0026 27.4 5.2 34 15-51 3-36 (258)
358 1pno_A NAD(P) transhydrogenase 27.3 63 0.0022 26.1 3.9 39 14-52 24-65 (180)
359 4id9_A Short-chain dehydrogena 27.3 46 0.0016 30.3 3.8 37 10-50 16-52 (347)
360 3qsg_A NAD-binding phosphogluc 27.2 33 0.0011 31.1 2.8 35 10-49 21-56 (312)
361 4g6h_A Rotenone-insensitive NA 27.2 40 0.0014 33.0 3.5 37 11-52 40-76 (502)
362 4hkt_A Inositol 2-dehydrogenas 27.1 2E+02 0.0067 25.9 8.1 118 280-418 6-137 (331)
363 3mm4_A Histidine kinase homolo 27.1 2.6E+02 0.0088 22.9 9.1 47 371-420 150-197 (206)
364 3foj_A Uncharacterized protein 27.1 1.2E+02 0.0041 21.6 5.5 33 13-49 56-88 (100)
365 2c20_A UDP-glucose 4-epimerase 27.1 56 0.0019 29.4 4.4 33 14-50 2-34 (330)
366 1f0y_A HCDH, L-3-hydroxyacyl-C 27.0 40 0.0014 30.2 3.3 34 12-50 14-47 (302)
367 3lzw_A Ferredoxin--NADP reduct 27.0 21 0.00072 32.2 1.4 35 12-51 6-40 (332)
368 3qvo_A NMRA family protein; st 26.8 1.1E+02 0.0037 25.9 6.0 35 14-51 23-58 (236)
369 1d4o_A NADP(H) transhydrogenas 26.8 65 0.0022 26.1 3.9 39 14-52 23-64 (184)
370 3hly_A Flavodoxin-like domain; 26.8 80 0.0027 25.1 4.8 36 14-49 1-37 (161)
371 3tem_A Ribosyldihydronicotinam 26.7 78 0.0027 27.1 4.9 36 14-49 2-40 (228)
372 3fkq_A NTRC-like two-domain pr 26.6 66 0.0022 29.9 4.8 40 11-50 140-181 (373)
373 1zi8_A Carboxymethylenebutenol 26.6 1E+02 0.0035 25.5 5.8 37 14-50 28-64 (236)
374 4huj_A Uncharacterized protein 26.5 34 0.0011 29.1 2.5 34 11-49 21-54 (220)
375 1t5b_A Acyl carrier protein ph 26.5 63 0.0022 26.6 4.3 37 13-49 1-43 (201)
376 4hps_A Pyrrolidone-carboxylate 26.4 36 0.0012 29.3 2.7 28 13-40 23-52 (228)
377 3sbx_A Putative uncharacterize 26.4 1E+02 0.0036 25.5 5.4 39 11-50 11-53 (189)
378 1ihu_A Arsenical pump-driving 26.4 52 0.0018 32.9 4.3 40 12-51 6-46 (589)
379 2h78_A Hibadh, 3-hydroxyisobut 26.3 52 0.0018 29.4 3.9 33 13-50 3-35 (302)
380 1hyq_A MIND, cell division inh 26.3 69 0.0023 27.8 4.7 37 15-51 3-41 (263)
381 3bfv_A CAPA1, CAPB2, membrane 26.2 74 0.0025 28.0 4.8 41 12-52 80-122 (271)
382 1weh_A Conserved hypothetical 26.2 1.8E+02 0.0061 23.5 6.8 98 266-378 23-133 (171)
383 3h1g_A Chemotaxis protein CHEY 26.2 1.9E+02 0.0066 21.1 10.5 46 372-419 81-127 (129)
384 3ot1_A 4-methyl-5(B-hydroxyeth 26.0 1.8E+02 0.0062 24.2 7.1 40 10-50 6-45 (208)
385 3pfb_A Cinnamoyl esterase; alp 25.8 1.1E+02 0.0036 26.0 5.8 37 14-50 46-84 (270)
386 2dpo_A L-gulonate 3-dehydrogen 25.8 43 0.0015 30.5 3.3 36 10-50 3-38 (319)
387 3dm5_A SRP54, signal recogniti 25.8 1.3E+02 0.0043 28.9 6.6 42 13-54 100-141 (443)
388 3obb_A Probable 3-hydroxyisobu 25.7 72 0.0025 28.7 4.7 31 13-48 3-33 (300)
389 2iht_A Carboxyethylarginine sy 25.7 1.3E+02 0.0044 29.8 7.0 77 294-379 13-106 (573)
390 1t9b_A Acetolactate synthase, 25.6 81 0.0028 32.2 5.6 79 295-379 84-178 (677)
391 1f4p_A Flavodoxin; electron tr 25.5 58 0.002 25.3 3.6 36 14-49 1-37 (147)
392 1rpn_A GDP-mannose 4,6-dehydra 25.4 62 0.0021 29.1 4.4 37 11-51 12-48 (335)
393 3gt7_A Sensor protein; structu 25.4 2.3E+02 0.0077 21.6 10.4 107 290-419 14-127 (154)
394 3uf0_A Short-chain dehydrogena 25.4 1.8E+02 0.0062 25.3 7.3 33 15-50 32-64 (273)
395 2ph1_A Nucleotide-binding prot 25.4 69 0.0024 27.9 4.5 40 13-52 17-58 (262)
396 4e3z_A Putative oxidoreductase 25.3 75 0.0026 27.8 4.7 37 10-49 22-58 (272)
397 3eme_A Rhodanese-like domain p 25.2 1.1E+02 0.0038 21.9 5.0 33 13-49 56-88 (103)
398 1vco_A CTP synthetase; tetrame 25.1 60 0.002 32.1 4.2 42 11-52 9-53 (550)
399 3nhm_A Response regulator; pro 25.1 2E+02 0.0069 21.0 7.7 45 372-419 77-122 (133)
400 3qrx_B Melittin; calcium-bindi 24.9 22 0.00076 18.2 0.6 17 361-377 1-17 (26)
401 4feg_A Pyruvate oxidase; carba 24.9 1.1E+02 0.0036 30.7 6.2 28 350-379 75-108 (603)
402 4dgk_A Phytoene dehydrogenase; 24.8 31 0.0011 33.5 2.3 32 13-49 1-32 (501)
403 3ip0_A 2-amino-4-hydroxy-6-hyd 24.8 99 0.0034 24.8 4.8 29 280-308 2-30 (158)
404 3qbc_A 2-amino-4-hydroxy-6-hyd 24.8 99 0.0034 24.9 4.8 29 279-307 5-33 (161)
405 1mio_A Nitrogenase molybdenum 24.8 2.2E+02 0.0074 28.0 8.3 34 13-51 335-368 (533)
406 1ehi_A LMDDL2, D-alanine:D-lac 24.7 66 0.0023 29.9 4.4 37 13-49 3-44 (377)
407 1w85_B Pyruvate dehydrogenase 24.6 2.4E+02 0.0082 25.4 8.1 30 277-310 201-230 (324)
408 2fsv_C NAD(P) transhydrogenase 24.6 73 0.0025 26.3 3.9 39 14-52 47-88 (203)
409 1g63_A Epidermin modifying enz 24.6 2.9E+02 0.0098 22.6 11.6 114 280-402 5-143 (181)
410 3i4f_A 3-oxoacyl-[acyl-carrier 24.5 69 0.0023 27.8 4.3 35 13-50 6-40 (264)
411 3nrb_A Formyltetrahydrofolate 24.5 79 0.0027 28.3 4.6 101 297-417 155-259 (287)
412 2ywx_A Phosphoribosylaminoimid 24.4 2.7E+02 0.0092 22.2 9.9 130 281-439 2-144 (157)
413 1byi_A Dethiobiotin synthase; 24.4 74 0.0025 26.7 4.4 32 16-47 4-36 (224)
414 3fwy_A Light-independent proto 24.3 81 0.0028 28.6 4.8 39 13-51 47-86 (314)
415 3jx9_A Putative phosphoheptose 24.3 75 0.0025 25.9 4.0 36 15-52 80-115 (170)
416 1ovm_A Indole-3-pyruvate decar 24.3 90 0.0031 30.8 5.5 25 355-379 70-100 (552)
417 1xfi_A Unknown protein; struct 24.3 68 0.0023 29.9 4.3 38 14-51 213-251 (367)
418 3pid_A UDP-glucose 6-dehydroge 24.3 51 0.0017 31.5 3.5 39 6-50 29-67 (432)
419 2pn1_A Carbamoylphosphate synt 24.3 85 0.0029 28.3 5.0 33 12-50 3-37 (331)
420 3qha_A Putative oxidoreductase 24.3 42 0.0014 30.1 2.8 33 13-50 15-47 (296)
421 1cbk_A Protein (7,8-dihydro-6- 24.2 1E+02 0.0034 24.8 4.7 29 280-308 3-31 (160)
422 1sqs_A Conserved hypothetical 24.2 72 0.0025 27.4 4.3 36 13-48 1-40 (242)
423 2pd6_A Estradiol 17-beta-dehyd 24.2 1E+02 0.0034 26.6 5.3 33 15-50 8-40 (264)
424 2qyt_A 2-dehydropantoate 2-red 24.2 20 0.00069 32.4 0.7 40 13-57 8-53 (317)
425 4e6p_A Probable sorbitol dehyd 24.2 90 0.0031 27.0 5.0 33 15-50 9-41 (259)
426 3abi_A Putative uncharacterize 24.1 3.7E+02 0.013 24.5 9.5 33 12-50 15-47 (365)
427 1djl_A Transhydrogenase DIII; 24.1 75 0.0026 26.3 3.9 39 14-52 46-87 (207)
428 3oh8_A Nucleoside-diphosphate 24.0 69 0.0024 31.3 4.6 35 13-51 147-181 (516)
429 1ybh_A Acetolactate synthase, 24.0 69 0.0024 32.0 4.6 28 350-379 75-108 (590)
430 2lpm_A Two-component response 23.9 69 0.0024 24.3 3.6 41 100-142 42-87 (123)
431 4gdh_A DJ-1, uncharacterized p 23.9 81 0.0028 26.1 4.4 41 12-53 3-43 (194)
432 2hpv_A FMN-dependent NADH-azor 23.9 71 0.0024 26.6 4.1 37 13-49 1-44 (208)
433 2vzf_A NADH-dependent FMN redu 23.8 76 0.0026 26.2 4.2 37 13-49 2-42 (197)
434 1u9c_A APC35852; structural ge 23.8 1.5E+02 0.0051 24.9 6.2 38 14-51 6-52 (224)
435 2woo_A ATPase GET3; tail-ancho 23.7 80 0.0028 28.7 4.7 39 14-52 19-58 (329)
436 2vk8_A Pyruvate decarboxylase 23.7 81 0.0028 31.2 5.1 25 355-379 69-99 (563)
437 3rc1_A Sugar 3-ketoreductase; 23.7 1.6E+02 0.0056 26.8 6.9 107 279-402 29-146 (350)
438 3ruf_A WBGU; rossmann fold, UD 23.6 82 0.0028 28.6 4.8 34 13-50 25-58 (351)
439 2bw0_A 10-FTHFDH, 10-formyltet 23.5 1E+02 0.0035 28.2 5.3 32 13-49 22-53 (329)
440 1orr_A CDP-tyvelose-2-epimeras 23.5 71 0.0024 28.9 4.4 32 14-49 2-33 (347)
441 3o1l_A Formyltetrahydrofolate 23.5 1.3E+02 0.0046 27.0 6.0 104 293-416 167-274 (302)
442 3nva_A CTP synthase; rossman f 23.5 80 0.0027 30.9 4.7 41 14-54 3-46 (535)
443 2z1m_A GDP-D-mannose dehydrata 23.4 69 0.0024 28.9 4.3 33 14-50 4-36 (345)
444 2wvg_A PDC, pyruvate decarboxy 23.4 1E+02 0.0035 30.5 5.8 25 355-379 68-98 (568)
445 2x5n_A SPRPN10, 26S proteasome 23.4 1.1E+02 0.0037 25.3 5.1 61 13-73 106-173 (192)
446 2c5a_A GDP-mannose-3', 5'-epim 23.4 1.1E+02 0.0038 28.2 5.7 36 12-51 28-63 (379)
447 1u7z_A Coenzyme A biosynthesis 23.2 62 0.0021 27.8 3.5 22 30-51 37-58 (226)
448 4ao6_A Esterase; hydrolase, th 23.2 77 0.0026 27.4 4.4 37 14-50 56-94 (259)
449 1yb4_A Tartronic semialdehyde 23.0 58 0.002 28.9 3.6 31 13-48 3-33 (295)
450 3k31_A Enoyl-(acyl-carrier-pro 23.0 1.4E+02 0.0047 26.5 6.1 34 15-50 31-65 (296)
451 3l77_A Short-chain alcohol deh 23.0 89 0.003 26.4 4.7 33 15-50 3-35 (235)
452 1oi4_A Hypothetical protein YH 23.0 2E+02 0.0068 23.5 6.7 40 11-51 21-60 (193)
453 3o9z_A Lipopolysaccaride biosy 22.9 4E+02 0.014 23.7 12.0 121 279-419 5-147 (312)
454 2gas_A Isoflavone reductase; N 22.9 68 0.0023 28.4 4.0 34 14-51 3-36 (307)
455 3obi_A Formyltetrahydrofolate 22.9 82 0.0028 28.2 4.4 103 295-417 154-260 (288)
456 3otg_A CALG1; calicheamicin, T 22.8 4.4E+02 0.015 24.0 10.8 89 15-140 243-334 (412)
457 2vbf_A Branched-chain alpha-ke 22.6 1E+02 0.0035 30.6 5.5 25 355-379 90-120 (570)
458 3k96_A Glycerol-3-phosphate de 22.6 55 0.0019 30.3 3.4 33 13-50 29-61 (356)
459 3v2g_A 3-oxoacyl-[acyl-carrier 22.5 1E+02 0.0035 27.0 5.0 32 15-49 32-63 (271)
460 1iy8_A Levodione reductase; ox 22.5 97 0.0033 26.9 4.9 33 15-50 14-46 (267)
461 3fhl_A Putative oxidoreductase 22.4 3.8E+02 0.013 24.4 9.2 121 279-418 7-139 (362)
462 1j9j_A Stationary phase surviV 22.3 2.1E+02 0.0073 24.8 6.8 84 293-381 13-129 (247)
463 4hs4_A Chromate reductase; tri 22.2 47 0.0016 27.8 2.5 35 10-45 3-40 (199)
464 3rp8_A Flavoprotein monooxygen 22.2 60 0.002 30.4 3.6 37 9-50 19-55 (407)
465 1zmt_A Haloalcohol dehalogenas 22.2 73 0.0025 27.5 4.0 33 14-49 1-33 (254)
466 3r5x_A D-alanine--D-alanine li 22.2 44 0.0015 29.9 2.6 39 12-50 2-44 (307)
467 3enk_A UDP-glucose 4-epimerase 22.2 84 0.0029 28.3 4.6 33 13-49 5-37 (341)
468 1fmt_A Methionyl-tRNA FMet for 22.1 75 0.0026 28.8 4.1 34 12-50 2-35 (314)
469 1xx6_A Thymidine kinase; NESG, 22.1 1.3E+02 0.0045 24.8 5.3 37 14-50 8-45 (191)
470 1e7w_A Pteridine reductase; di 22.1 97 0.0033 27.4 4.8 31 15-48 10-40 (291)
471 1z82_A Glycerol-3-phosphate de 22.0 65 0.0022 29.3 3.7 33 13-50 14-46 (335)
472 3guy_A Short-chain dehydrogena 22.0 72 0.0025 27.0 3.8 34 14-50 1-34 (230)
473 2z04_A Phosphoribosylaminoimid 21.9 1E+02 0.0034 28.4 5.1 33 14-51 2-34 (365)
474 1ozh_A ALS, acetolactate synth 21.9 95 0.0032 30.8 5.1 28 350-379 73-106 (566)
475 3s8m_A Enoyl-ACP reductase; ro 21.8 1.3E+02 0.0044 28.6 5.7 35 13-50 60-95 (422)
476 3q0i_A Methionyl-tRNA formyltr 21.7 1.3E+02 0.0045 27.3 5.6 34 12-50 6-39 (318)
477 4tmk_A Protein (thymidylate ki 21.7 1.8E+02 0.0063 24.4 6.3 37 14-50 4-41 (213)
478 1kyq_A Met8P, siroheme biosynt 21.7 3.9E+02 0.013 23.5 8.5 149 276-439 12-210 (274)
479 2x7j_A 2-succinyl-5-enolpyruvy 21.6 82 0.0028 31.6 4.7 80 294-379 32-127 (604)
480 4amg_A Snogd; transferase, pol 21.6 3.6E+02 0.012 24.6 9.0 91 13-140 236-330 (400)
481 2bru_C NAD(P) transhydrogenase 21.6 72 0.0025 25.8 3.2 39 14-52 31-72 (186)
482 2zqe_A MUTS2 protein; alpha/be 21.5 42 0.0014 23.6 1.8 27 296-322 21-47 (83)
483 1rtt_A Conserved hypothetical 21.4 92 0.0032 25.5 4.3 36 12-48 5-43 (193)
484 3u0b_A Oxidoreductase, short c 21.4 71 0.0024 30.7 3.9 34 15-51 214-247 (454)
485 1t1j_A Hypothetical protein; s 21.3 1.3E+02 0.0043 23.1 4.6 33 13-45 7-47 (125)
486 3ax6_A Phosphoribosylaminoimid 21.3 1.3E+02 0.0045 27.7 5.8 33 14-51 2-34 (380)
487 1gee_A Glucose 1-dehydrogenase 21.1 69 0.0024 27.6 3.6 32 15-49 8-39 (261)
488 4f0j_A Probable hydrolytic enz 21.1 1E+02 0.0034 26.8 4.8 37 15-51 47-83 (315)
489 1uan_A Hypothetical protein TT 21.1 94 0.0032 26.5 4.3 36 13-48 1-36 (227)
490 2wtm_A EST1E; hydrolase; 1.60A 21.0 1.4E+02 0.0049 25.1 5.7 35 15-49 28-64 (251)
491 3u7q_B Nitrogenase molybdenum- 21.0 5.8E+02 0.02 24.8 10.8 32 14-50 365-396 (523)
492 2hna_A Protein MIOC, flavodoxi 21.0 1.2E+02 0.0042 23.4 4.8 35 14-48 2-37 (147)
493 2ab0_A YAJL; DJ-1/THIJ superfa 21.0 2.6E+02 0.0089 23.0 7.1 38 14-52 3-40 (205)
494 2rjn_A Response regulator rece 20.9 1.7E+02 0.0059 22.2 5.7 39 8-50 2-40 (154)
495 1nff_A Putative oxidoreductase 20.9 1.2E+02 0.0041 26.2 5.1 33 15-50 8-40 (260)
496 3ego_A Probable 2-dehydropanto 20.8 56 0.0019 29.4 3.0 38 14-57 3-41 (307)
497 2nxw_A Phenyl-3-pyruvate decar 20.8 95 0.0033 30.8 4.9 28 350-379 84-117 (565)
498 3pdu_A 3-hydroxyisobutyrate de 20.7 75 0.0026 28.1 3.8 32 14-50 2-33 (287)
499 3c24_A Putative oxidoreductase 20.7 86 0.0029 27.7 4.2 32 13-49 11-43 (286)
500 3m2t_A Probable dehydrogenase; 20.7 1.8E+02 0.006 26.7 6.5 125 279-419 7-143 (359)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.2e-66 Score=508.62 Aligned_cols=433 Identities=24% Similarity=0.415 Sum_probs=351.6
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeCcccccccccCC--CCCCceEEEccCCCCCCCCCCcc
Q 012412 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTTRFFYKSLHRDS--SSSSIPLEAISDGYDEGGYAQAE 83 (464)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~ 83 (464)
|...++.||+++|++++||++|++.||+.|+.+| +.|||++++.+...+.+.. ...+++|..+|+++++ +.+...
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~-~~~~~~ 86 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPK-GYVSSG 86 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCT-TCCCCS
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCC-CccccC
Confidence 4556678999999999999999999999999999 9999999986666554221 1357999999988877 444433
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHhcC-CCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhc--Ccc-
Q 012412 84 SIEAYLERFWQIGPQTLTELVEKMNG-SDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKK--GSL- 159 (464)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~--~~~- 159 (464)
+....+..+.......+++.++++.+ ...|+||||+|.++.|+..+|+++|||++.|++++++.+..+.+... ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 87 NPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 33344444444445556666665432 12457999999999999999999999999999999998877766421 111
Q ss_pred --cCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcC-Ceee
Q 012412 160 --ELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTW-SLRT 236 (464)
Q Consensus 160 --~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~-~~~~ 236 (464)
....+.....+||+|.+...+++.+... .....+.+.+. +......+++.+++||+++||++..+.+.... ++++
T Consensus 167 ~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~-~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~ 244 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLH-KMGLELPRANAVAINSFATIHPLIENELNSKFKLLLN 244 (454)
T ss_dssp HHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEE
T ss_pred CCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHH-HHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEE
Confidence 1111122234899999888888877643 33344666666 77777888999999999999998888877654 5999
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcC
Q 012412 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE 316 (464)
Q Consensus 237 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 316 (464)
|||+.+.... + ..+++.++.+||+.++++++|||+|||....+.+++.+++.+|++.+++|+|+++.
T Consensus 245 vGPl~~~~~~----~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~ 311 (454)
T 3hbf_A 245 VGPFNLTTPQ----R---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRG 311 (454)
T ss_dssp CCCHHHHSCC----S---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCS
T ss_pred ECCccccccc----c---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 9999754110 0 01124678999998888999999999999888999999999999999999999988
Q ss_pred cccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc
Q 012412 317 SEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 396 (464)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G 396 (464)
.....+++++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.||
T Consensus 312 ~~~~~lp~~~~~~--~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g 389 (454)
T 3hbf_A 312 DPKEKLPKGFLER--TKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLE 389 (454)
T ss_dssp CHHHHSCTTHHHH--TTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSC
T ss_pred cchhcCCHhHHhh--cCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhC
Confidence 7656788888777 78999999999999999999988899999999999999999999999999999999999999449
Q ss_pred ceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 397 TGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 397 ~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+|+.+. .++.++|.++|+++|.++++++||+||+++++++++++.+|||+.+.+++|+++|.
T Consensus 390 ~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 390 IGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp SEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred eeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 999998 79999999999999998767799999999999999999999999999999999884
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1e-60 Score=480.56 Aligned_cols=446 Identities=29% Similarity=0.561 Sum_probs=333.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCC------CCCceEEEccCCCCCCC--CCCc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSS------SSSIPLEAISDGYDEGG--YAQA 82 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~~~~~~--~~~~ 82 (464)
++++||+++|+++.||++|++.||++|++|||+|||++++.+.+.+.+... ..+++|++++++++... ....
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 446799999999999999999999999999999999999887665542110 13899999997665511 1222
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHHhcCC--CCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh----c
Q 012412 83 ESIEAYLERFWQIGPQTLTELVEKMNGS--DSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK----K 156 (464)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~--~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~----~ 156 (464)
.....++..+...+...++++++.+..+ ..++||||+|.++.|+..+|+++|||++.+++++++....+.++. .
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 3455556655566777888888887642 245699999999999999999999999999999877665543221 1
Q ss_pred CcccCCCC--------CCce-eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHH
Q 012412 157 GSLELPLT--------GNEI-LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEW 227 (464)
Q Consensus 157 ~~~~~p~~--------~~~~-~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~ 227 (464)
+..|.+.. +... .+|+++.+...+++.+.........+.+.+. .......+++.+++||+++||++..+.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFI-EVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHH-HHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHH-HHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 22222110 0111 3466665555555544432222233444444 555666788999999999999987777
Q ss_pred HHhc-CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC
Q 012412 228 LRKT-WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS 306 (464)
Q Consensus 228 ~~~~-~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~ 306 (464)
+++. +++++|||+.+..............+.++|. .+.++.+|++.++++++|||++||....+.+.+..++.+|++.
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 323 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWK-EDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANC 323 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccc-cchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 7654 3699999996520000000000000112222 2356889999877889999999999877888899999999999
Q ss_pred CCeEEEEEcCcc----cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCcc
Q 012412 307 DQHFLWVVRESE----QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 307 ~~~~i~~~~~~~----~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
+++|+|+++... ...+++++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.
T Consensus 324 ~~~~l~~~~~~~~~~~~~~l~~~~~~~--~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~ 401 (482)
T 2pq6_A 324 KKSFLWIIRPDLVIGGSVIFSSEFTNE--IADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 401 (482)
T ss_dssp TCEEEEECCGGGSTTTGGGSCHHHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CCcEEEEEcCCccccccccCcHhHHHh--cCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCccc
Confidence 999999997642 12367777766 679999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHH-hHhcceeecc-CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 383 DQSTNAKYIL-DVWKTGLKFP-IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 383 DQ~~na~rl~-~~~G~g~~l~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
||+.||++++ +. |+|+.+. +++.++|.++|+++|.|+++++||+||+++++.+++++.+||++...+++|+++|...
T Consensus 402 dQ~~na~~~~~~~-G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 402 DQPTDCRFICNEW-EIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp THHHHHHHHHHTS-CCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHHh-CEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 9999999997 68 9999998 8999999999999999875667999999999999999999999999999999998654
Q ss_pred c
Q 012412 461 K 461 (464)
Q Consensus 461 ~ 461 (464)
+
T Consensus 481 ~ 481 (482)
T 2pq6_A 481 Q 481 (482)
T ss_dssp -
T ss_pred C
Confidence 3
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.8e-58 Score=462.60 Aligned_cols=430 Identities=29% Similarity=0.489 Sum_probs=320.8
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCccc--ccccccC-CC-CCCceEEEccCCCCCCCCCCccC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFF--YKSLHRD-SS-SSSIPLEAISDGYDEGGYAQAES 84 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~--~~~~~~~-~~-~~~~~~~~i~~~~~~~~~~~~~~ 84 (464)
.++++||+++|+++.||++|+++||++|++| ||+|||++++.. ...+... .. ..++.|++++..... ......+
T Consensus 3 ~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~~~~~ 81 (480)
T 2vch_A 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DLSSSTR 81 (480)
T ss_dssp ---CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TSCTTCC
T ss_pred CCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCC-CCCCchh
Confidence 3455799999999999999999999999998 999999999873 3333310 01 258999999864322 1111223
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhcCCCCCc-cEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh--c--Ccc
Q 012412 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPV-DCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK--K--GSL 159 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~-DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~--~--~~~ 159 (464)
....+..........++++++.+.. ..++ ||||+|.++.|+..+|+++|||++.+++++++....+.++. . ...
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 3333334444556677777777632 2457 99999999989999999999999999999887665554332 1 111
Q ss_pred cCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh----cCCee
Q 012412 160 ELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK----TWSLR 235 (464)
Q Consensus 160 ~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~----~~~~~ 235 (464)
++.+...+..+|+++++...+++..... + .......+. +......+..++++|++.+++......+.+ .++++
T Consensus 161 ~~~~~~~~~~~Pg~~p~~~~~l~~~~~~-~-~~~~~~~~~-~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~ 237 (480)
T 2vch_A 161 EFRELTEPLMLPGCVPVAGKDFLDPAQD-R-KDDAYKWLL-HNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237 (480)
T ss_dssp CGGGCSSCBCCTTCCCBCGGGSCGGGSC-T-TSHHHHHHH-HHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEE
T ss_pred cccccCCcccCCCCCCCChHHCchhhhc-C-CchHHHHHH-HHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEE
Confidence 1111012335677776665555544321 1 112334444 555566777889999999999877777653 24699
Q ss_pred eecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEc
Q 012412 236 TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVR 315 (464)
Q Consensus 236 ~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 315 (464)
+|||+..... +.. . .+.+.++.+||+.++++++|||||||+...+.+.+.+++.+|++++++|+|+++
T Consensus 238 ~vGpl~~~~~-----~~~------~-~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~ 305 (480)
T 2vch_A 238 PVGPLVNIGK-----QEA------K-QTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIR 305 (480)
T ss_dssp ECCCCCCCSC-----SCC------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEeccccccc-----ccc------C-ccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 9999976511 000 0 123467899999877889999999999888899999999999999999999997
Q ss_pred Cccc----------------CcCChhhhhhccCCCcEEEEe-ccChHHhhccccccceeccCChhHHHHHHHhCCcEecc
Q 012412 316 ESEQ----------------AKLPKKFSDETLTSHKSLVVS-WCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAM 378 (464)
Q Consensus 316 ~~~~----------------~~~~~~~~~~~~~~~nv~~~~-~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~ 378 (464)
.... ..+|+++.++ ..++..++. |+||.++|+|+++++||||||+||++||+++|||||++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~ 383 (480)
T 2vch_A 306 SPSGIANSSYFDSHSQTDPLTFLPPGFLER--TKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAW 383 (480)
T ss_dssp CCCSSTTTTTTCC--CSCGGGGSCTTHHHH--TTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred CccccccccccccccccchhhhcCHHHHHH--hCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEec
Confidence 6421 2355666555 344456665 99999999999988899999999999999999999999
Q ss_pred CCccchhhHHHHH-HhHhcceeecc-----CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Q 012412 379 PQWSDQSTNAKYI-LDVWKTGLKFP-----IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDE 452 (464)
Q Consensus 379 P~~~DQ~~na~rl-~~~~G~g~~l~-----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~ 452 (464)
|++.||+.||+++ ++. |+|+.+. .++.++|.++|+++|.++++++||+||+++++++++++.+||++...+++
T Consensus 384 P~~~DQ~~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~ 462 (480)
T 2vch_A 384 PLYAEQKMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSL 462 (480)
T ss_dssp CCSTTHHHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred cccccchHHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 9999999999997 688 9999997 38999999999999986555699999999999999999999999999999
Q ss_pred HHHHHHh
Q 012412 453 FVASLAC 459 (464)
Q Consensus 453 ~~~~l~~ 459 (464)
+++++..
T Consensus 463 ~v~~~~~ 469 (480)
T 2vch_A 463 VALKWKA 469 (480)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.2e-59 Score=466.32 Aligned_cols=435 Identities=30% Similarity=0.473 Sum_probs=325.1
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCC--eEEEEeCcccccccccCCC---CCCceEEEccCCCCCCCCCCccC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGI--KVTLVTTRFFYKSLHRDSS---SSSIPLEAISDGYDEGGYAQAES 84 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh--~V~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~ 84 (464)
..+++||+++|+++.||++|++.||+.|++||| .|||++++...+.+.+... ..++.+++++++++. ..+....
T Consensus 4 ~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~-~~~~~~~ 82 (456)
T 2c1x_A 4 TTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPE-GYVFAGR 82 (456)
T ss_dssp ---CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCT-TCCCCCC
T ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCC-cccccCC
Confidence 344679999999999999999999999999975 5688888755444332111 257999999887765 3221122
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhcCC-CCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhh--c---Cc
Q 012412 85 IEAYLERFWQIGPQTLTELVEKMNGS-DSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVK--K---GS 158 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~l~~~-~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~--~---~~ 158 (464)
....+..+.......++++++++.++ ..++||||+|.++.|+..+|+++|||++.+++++++....+.+.. . +.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T 2c1x_A 83 PQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGV 162 (456)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCS
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCC
Confidence 23333334443344455555544321 145699999999999999999999999999999876655433211 1 11
Q ss_pred ccC-CC-CCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcC-Cee
Q 012412 159 LEL-PL-TGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTW-SLR 235 (464)
Q Consensus 159 ~~~-p~-~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~-~~~ 235 (464)
.+. .. .....++|+++.++..+++...........+...+. +......+++.+++||+++|+++..+.+++.. +++
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~ 241 (456)
T 2c1x_A 163 SGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLH-RMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYL 241 (456)
T ss_dssp SCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHH-HHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEE
T ss_pred cccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHH-HHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEE
Confidence 100 11 111224788876666665543321111222334444 44455577889999999999998777666544 599
Q ss_pred eecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEc
Q 012412 236 TIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVR 315 (464)
Q Consensus 236 ~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 315 (464)
+|||+..... .. . .+.+.++.+|++.++++++|||++||....+.+.+..++.++++.+.+|+|+++
T Consensus 242 ~vGpl~~~~~------~~-~------~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~ 308 (456)
T 2c1x_A 242 NIGPFNLITP------PP-V------VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLR 308 (456)
T ss_dssp ECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred EecCcccCcc------cc-c------ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEEC
Confidence 9999965411 00 0 011345889999877889999999999877889999999999999999999998
Q ss_pred CcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHh
Q 012412 316 ESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW 395 (464)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~ 395 (464)
......+++++.++ .++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||+++++.|
T Consensus 309 ~~~~~~l~~~~~~~--~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~ 386 (456)
T 2c1x_A 309 DKARVHLPEGFLEK--TRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL 386 (456)
T ss_dssp GGGGGGSCTTHHHH--HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS
T ss_pred CcchhhCCHHHHhh--cCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHh
Confidence 76555677777666 6789999999999999998888889999999999999999999999999999999999999988
Q ss_pred cceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhhc
Q 012412 396 KTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACSK 461 (464)
Q Consensus 396 G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~~ 461 (464)
|+|+.+. .++.++|.++|+++|.|+++++||+||+++++.+++++.+|||+...+++|++++...|
T Consensus 387 g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~~ 454 (456)
T 2c1x_A 387 EIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 454 (456)
T ss_dssp CCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred CeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhcC
Confidence 9999997 79999999999999998767789999999999999999999999999999999986543
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.2e-56 Score=447.88 Aligned_cols=424 Identities=23% Similarity=0.421 Sum_probs=322.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCccccc-----cccc-CCCCCCceEEEccCCCCCCCCCCcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYK-----SLHR-DSSSSSIPLEAISDGYDEGGYAQAE 83 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~-----~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~ 83 (464)
+++||+++|+++.||++|++.||+.|++| ||+|||++++.+.+ .+.. .....++.|+++|++... ..+...
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~-~~~~~~ 86 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPP-PQELLK 86 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCC-CGGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCC-cccccC
Confidence 46799999999999999999999999999 99999999987532 1110 012358999999975322 111112
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcc--cC
Q 012412 84 SIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSL--EL 161 (464)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~--~~ 161 (464)
.....+..........++++++++ . ..++||||+|.++.|+..+|+++|||++++++++++....+.++..... ++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~-~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (463)
T 2acv_A 87 SPEFYILTFLESLIPHVKATIKTI-L-SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVF 164 (463)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHH-C-CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCC
T ss_pred CccHHHHHHHHhhhHHHHHHHHhc-c-CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCC
Confidence 221113333345556777888776 2 2456999999999999999999999999999998877665544422111 11
Q ss_pred CCCCC---ceeCCCC-CCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh----cCC
Q 012412 162 PLTGN---EILLPGM-PPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK----TWS 233 (464)
Q Consensus 162 p~~~~---~~~~p~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~----~~~ 233 (464)
...+. ...+|++ +++...+++...... ......+. +......+++.+++||++++++.....+.+ .++
T Consensus 165 ~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~-~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~ 240 (463)
T 2acv_A 165 DDSDRDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYY-KLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPP 240 (463)
T ss_dssp CCSSGGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHH-HHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCC
T ss_pred CCccccCceeECCCCCCCCChHHCchhhcCC---chHHHHHH-HHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCc
Confidence 11122 4457887 666655555333211 11344444 555566778899999999999988777765 346
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEE
Q 012412 234 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLW 312 (464)
Q Consensus 234 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~ 312 (464)
+++|||+.+.... +.... . .+.+.++.+|++.++++++|||++||.. ..+.+.+..++.+|++.+++|+|
T Consensus 241 v~~vGpl~~~~~~----~~~~~---~--~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 241 IYAVGPLLDLKGQ----PNPKL---D--QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp EEECCCCCCSSCC----CBTTB---C--HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEeCCCcccccc----ccccc---c--cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 9999999765110 00000 0 1234678999998778899999999998 78889999999999999999999
Q ss_pred EEcCcccCcCChhhhhhccC--CCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHH
Q 012412 313 VVRESEQAKLPKKFSDETLT--SHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKY 390 (464)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~r 390 (464)
+++.+ .+.+++++.++ . ++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||++
T Consensus 312 ~~~~~-~~~l~~~~~~~--~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~ 388 (463)
T 2acv_A 312 SNSAE-KKVFPEGFLEW--MELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFR 388 (463)
T ss_dssp ECCCC-GGGSCTTHHHH--HHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred EECCC-cccCChhHHHh--hccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHH
Confidence 99863 12466776655 4 6899999999999999988888899999999999999999999999999999999999
Q ss_pred H-HhHhcceeec-c-------CcCHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 391 I-LDVWKTGLKF-P-------IVKRDAIADCISEILE-GERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 391 l-~~~~G~g~~l-~-------~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+ ++. |+|+.+ . .++.++|.++|+++|+ ++ +||+||+++++.+++++.+||++...+++||+++.
T Consensus 389 lv~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 389 LVKEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 5 888 999999 2 4799999999999996 34 89999999999999999999999999999999985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.5e-44 Score=358.79 Aligned_cols=396 Identities=20% Similarity=0.261 Sum_probs=264.3
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC----ccC
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ----AES 84 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~ 84 (464)
..++++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.|++++..++. .... ..+
T Consensus 8 ~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~-~~~~~~~~~~~ 82 (424)
T 2iya_A 8 ASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVK----AAGATPVVYDSILPK-ESNPEESWPED 82 (424)
T ss_dssp ---CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HHTCEEEECCCCSCC-TTCTTCCCCSS
T ss_pred CCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHH----hCCCEEEecCccccc-cccchhhcchh
Confidence 3466789999999999999999999999999999999999998877776 568999999876543 2111 223
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCC
Q 012412 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLT 164 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~ 164 (464)
....+..+.........++.+ +.++.+| |+||+|.+..|+..+|+.+|||++.+++.++........+.....+..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~-~l~~~~p-D~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (424)
T 2iya_A 83 QESAMGLFLDEAVRVLPQLED-AYADDRP-DLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADR 160 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HTTTSCC-SEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhccCC-CEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccccccccc
Confidence 334444343333333334433 3334455 99999988888999999999999998876631110000000000000000
Q ss_pred CCceeCCCCCCCCCCCCCCccccCCCC----chHHHHHHHHH------hhhccCCcEEEecchhhhhHHHHHHHHhc-CC
Q 012412 165 GNEILLPGMPPLEPQDMPSFIHDLGSY----PAVSYMMMKFQ------FENIDKADWVLCNTFYELEEEVVEWLRKT-WS 233 (464)
Q Consensus 165 ~~~~~~p~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~~ 233 (464)
.. .+ .++................ ..+.+.+. +. ......++.+++++++++++.. ... .+
T Consensus 161 ~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~~~~~~ 231 (424)
T 2iya_A 161 GE---EA-AAPAGTGDAEEGAEAEDGLVRFFTRLSAFLE-EHGVDTPATEFLIAPNRCIVALPRTFQIKG----DTVGDN 231 (424)
T ss_dssp -----------------------HHHHHHHHHHHHHHHH-HTTCCSCHHHHHHCCSSEEESSCTTTSTTG----GGCCTT
T ss_pred cc---cc-ccccccccchhhhccchhHHHHHHHHHHHHH-HcCCCCCHHHhccCCCcEEEEcchhhCCCc----cCCCCC
Confidence 00 00 0000000000000000000 01111111 10 0011145678899998887622 112 25
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE
Q 012412 234 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313 (464)
Q Consensus 234 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 313 (464)
+++|||+.... .+..+|++..+++++|||++||......+.+..+++++++.+.+++|+
T Consensus 232 ~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~ 290 (424)
T 2iya_A 232 YTFVGPTYGDR---------------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLS 290 (424)
T ss_dssp EEECCCCCCCC---------------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEE
T ss_pred EEEeCCCCCCc---------------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 88999875430 111235554456789999999998667889999999999988999998
Q ss_pred EcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh
Q 012412 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD 393 (464)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~ 393 (464)
++.... .+.+. . .++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++++
T Consensus 291 ~g~~~~---~~~~~-~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~ 362 (424)
T 2iya_A 291 VGRFVD---PADLG-E--VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE 362 (424)
T ss_dssp CCTTSC---GGGGC-S--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH
T ss_pred ECCcCC---hHHhc-c--CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH
Confidence 876421 11221 1 5789999999999999999999 99999999999999999999999999999999999999
Q ss_pred Hhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 394 VWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 394 ~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
. |+|+.+. +++.++|.++|+++|+|+ +++++++++++.+++ .++ .+.+.+.|+++.
T Consensus 363 ~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 420 (424)
T 2iya_A 363 L-GLGRHIPRDQVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE----AGG-ARAAADILEGIL 420 (424)
T ss_dssp T-TSEEECCGGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCH-HHHHHHHHHHHH
T ss_pred C-CCEEEcCcCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCc-HHHHHHHHHHHH
Confidence 9 9999997 789999999999999997 899999999999884 233 334444444443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.5e-44 Score=354.43 Aligned_cols=361 Identities=18% Similarity=0.163 Sum_probs=229.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCC---------CCC-
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG---------GYA- 80 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~- 80 (464)
.+.|||||+++++.||++|+++||++|++|||+|+|++++.+.+... .++.+.++....... ...
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-----AGLCAVDVSPGVNYAKLFVPDDTDVTDP 94 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-----TTCEEEESSTTCCSHHHHSCCC------
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-----cCCeeEecCCchhHhhhccccccccccc
Confidence 45699999999999999999999999999999999999987765443 577787775432210 000
Q ss_pred ---CccCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcC
Q 012412 81 ---QAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKG 157 (464)
Q Consensus 81 ---~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 157 (464)
.......+...+.......+.++++.+. +++| |+||+|.+..++..+|+.+|||++.+...+..........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~p-D~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~--- 169 (400)
T 4amg_A 95 MHSEGLGEGFFAEMFARVSAVAVDGALRTAR-SWRP-DLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL--- 169 (400)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHH-HHCC-SEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH---
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hcCC-CEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH---
Confidence 0111111112222222222233333222 2256 9999999999999999999999988654431100000000
Q ss_pred cccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhh-ccCCcEEEecchhhhhHHHHHHHHhcCCeee
Q 012412 158 SLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN-IDKADWVLCNTFYELEEEVVEWLRKTWSLRT 236 (464)
Q Consensus 158 ~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 236 (464)
. ...+..... +..-. .......+......... ..+........+.
T Consensus 170 ---------------------------~-----~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 215 (400)
T 4amg_A 170 ---------------------------I-----RRAMSKDYE-RHGVTGEPTGSVRLTTTPPSVEA-LLPEDRRSPGAWP 215 (400)
T ss_dssp ---------------------------H-----HHHTHHHHH-HTTCCCCCSCEEEEECCCHHHHH-TSCGGGCCTTCEE
T ss_pred ---------------------------H-----HHHHHHHHH-HhCCCcccccchhhcccCchhhc-cCcccccCCcccC
Confidence 0 000111111 11100 11111222222111110 0000000001111
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC--CHHHHHHHHHHHhhCCCeEEEEE
Q 012412 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--KAEEMEELAWGLKSSDQHFLWVV 314 (464)
Q Consensus 237 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~i~~~ 314 (464)
+++.... ....+.+|++..+++++|||++||.... ..+.+..+++++++.+.+++|.+
T Consensus 216 ~~~~~~~--------------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 275 (400)
T 4amg_A 216 MRYVPYN--------------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTL 275 (400)
T ss_dssp CCCCCCC--------------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEEC
T ss_pred ccccccc--------------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEe
Confidence 1111110 0122335777778899999999998743 34678889999999999999998
Q ss_pred cCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhH
Q 012412 315 RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDV 394 (464)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~ 394 (464)
++........ .++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|++.||+.||+++++.
T Consensus 276 ~~~~~~~~~~-------~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~ 346 (400)
T 4amg_A 276 GGGDLALLGE-------LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL 346 (400)
T ss_dssp CTTCCCCCCC-------CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH
T ss_pred cCcccccccc-------CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC
Confidence 7764433322 7899999999999999999999 999999999999999999999999999999999999999
Q ss_pred hcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 395 WKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 395 ~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
|+|+.++ +.++ ++|+++|+|+ +||++|++++++++++ .+ ...+.+.+++|
T Consensus 347 -G~g~~l~~~~~~~----~al~~lL~d~---~~r~~a~~l~~~~~~~----~~-~~~~a~~le~l 398 (400)
T 4amg_A 347 -GIGFDAEAGSLGA----EQCRRLLDDA---GLREAALRVRQEMSEM----PP-PAETAAXLVAL 398 (400)
T ss_dssp -TSEEECCTTTCSH----HHHHHHHHCH---HHHHHHHHHHHHHHTS----CC-HHHHHHHHHHH
T ss_pred -CCEEEcCCCCchH----HHHHHHHcCH---HHHHHHHHHHHHHHcC----CC-HHHHHHHHHHh
Confidence 9999997 5544 5677899997 9999999999999863 23 33444555555
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.5e-42 Score=337.79 Aligned_cols=373 Identities=13% Similarity=0.129 Sum_probs=249.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC-ccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ-AESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~ 92 (464)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+. ..|+.+++++..... .... .......+..+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~----~~g~~~~~i~~~~~~-~~~~~~~~~~~~~~~~ 75 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLA----EVGVPHVPVGPSARA-PIQRAKPLTAEDVRRF 75 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCCEEECCC--------CCSCCCHHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHH----HcCCeeeeCCCCHHH-HhhcccccchHHHHHH
Confidence 69999999999999999999999999999999999998776666 568999999865322 1111 11111112122
Q ss_pred HHhCcHHHHHHHHHhcC-CCCCccEEEeCC-chhh--HHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 93 WQIGPQTLTELVEKMNG-SDSPVDCIVYDS-ILLW--ALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
.. ......++++.+ ..+ +|+||+|. +..+ +..+|+.+|||++.++++++... ..
T Consensus 76 ~~---~~~~~~~~~l~~~~~~-pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-------~~----------- 133 (415)
T 1iir_A 76 TT---EAIATQFDEIPAAAEG-CAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-------SP----------- 133 (415)
T ss_dssp HH---HHHHHHHHHHHHHTTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-------CS-----------
T ss_pred HH---HHHHHHHHHHHHHhcC-CCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-------Cc-----------
Confidence 11 122333344331 224 59999997 6688 89999999999999887763211 00
Q ss_pred eCCCCCCCCCCCC-CC-ccccCCC--Cc-hHHHHHH------HHHhhh---------ccCCcEEEecchhhhhHHHHHHH
Q 012412 169 LLPGMPPLEPQDM-PS-FIHDLGS--YP-AVSYMMM------KFQFEN---------IDKADWVLCNTFYELEEEVVEWL 228 (464)
Q Consensus 169 ~~p~~p~~~~~~~-~~-~~~~~~~--~~-~~~~~~~------~~~~~~---------~~~~~~~l~~s~~~l~~~~~~~~ 228 (464)
++|.. .... .. .. ...+... .. .....+. ++.+.. .... .+++++++++++. .
T Consensus 134 ~~p~~-~~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~----~ 206 (415)
T 1iir_A 134 YYPPP-PLGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL----Q 206 (415)
T ss_dssp SSCCC-C----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC----C
T ss_pred ccCCc-cCCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC----C
Confidence 01110 0000 00 00 0000000 00 0000000 011100 0112 4678888777630 0
Q ss_pred HhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 229 RKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 229 ~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
+...++++|||+..+.. .+.+.++.+|++. ++++|||++||.. ...+....+++++++++.
T Consensus 207 ~~~~~~~~vG~~~~~~~----------------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~ 267 (415)
T 1iir_A 207 PTDLDAVQTGAWILPDE----------------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGR 267 (415)
T ss_dssp CCSSCCEECCCCCCCCC----------------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTC
T ss_pred cccCCeEeeCCCccCcc----------------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCC
Confidence 11115788998865410 1124778899975 3579999999987 678889999999999999
Q ss_pred eEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHH
Q 012412 309 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 388 (464)
Q Consensus 309 ~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na 388 (464)
+++|+++..... . . . .++|+++.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||
T Consensus 268 ~~v~~~g~~~~~-~-~----~--~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 337 (415)
T 1iir_A 268 RVILSRGWADLV-L-P----D--DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYA 337 (415)
T ss_dssp CEEECTTCTTCC-C-S----S--CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred eEEEEeCCCccc-c-c----C--CCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHH
Confidence 999988764322 1 1 1 5689999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 389 KYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 389 ~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
+++++. |+|+.++ +++.++|.++|+++ .|+ +++++++++++.+++ ....+.+.+.++++..
T Consensus 338 ~~l~~~-g~g~~~~~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 338 GRVAEL-GVGVAHDGPIPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHH-TSEEECSSSSCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred HHHHHC-CCcccCCcCCCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 999999 9999997 78999999999999 886 999999999988863 3334455555555543
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2.9e-40 Score=327.05 Aligned_cols=360 Identities=17% Similarity=0.223 Sum_probs=249.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCC---CccCHHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYA---QAESIEA 87 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~ 87 (464)
.+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.+.+++...+..... .......
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVR----AAGATVVPYQSEIIDADAAEVFGSDDLGV 93 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCEEEECCCSTTTCCHHHHHHSSSSCH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHH----hcCCEEEeccccccccccchhhccccHHH
Confidence 45789999999999999999999999999999999999998888887 6789999998554331100 0001111
Q ss_pred HHHH-HHHhCcHHHHHHHHHhcCCCCCccEEEeC-CchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCC
Q 012412 88 YLER-FWQIGPQTLTELVEKMNGSDSPVDCIVYD-SILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTG 165 (464)
Q Consensus 88 ~~~~-~~~~~~~~l~~~~~~l~~~~~p~DlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~ 165 (464)
.+.. +.......+..+.+.+ ++++| |+||+| ....++..+|+.+|||++.+.+...... .....+ .
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~l-~~~~P-DlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~--------~~~~~~-~- 161 (415)
T 3rsc_A 94 RPHLMYLRENVSVLRATAEAL-DGDVP-DLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE--------HYSFSQ-D- 161 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-SSSCC-SEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS--------SCCHHH-H-
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccCC-CEEEECchhhhHHHHHHHHhCCCEEEEEecccccC--------cccccc-c-
Confidence 1222 2332223334444444 44466 999999 7888899999999999998765431100 000000 0
Q ss_pred CceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhc----------cC-CcEEEecchhhhhHHHHHHHHhc--C
Q 012412 166 NEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI----------DK-ADWVLCNTFYELEEEVVEWLRKT--W 232 (464)
Q Consensus 166 ~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~l~~s~~~l~~~~~~~~~~~--~ 232 (464)
..+.. . ...+. ....+...+. +..... .. .+..++...+++++ +... .
T Consensus 162 ---~~~~~---~-~~~p~------~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~ 222 (415)
T 3rsc_A 162 ---MVTLA---G-TIDPL------DLPVFRDTLR-DLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI-----AGDTFDD 222 (415)
T ss_dssp ---HHHHH---T-CCCGG------GCHHHHHHHH-HHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST-----TGGGCCT
T ss_pred ---ccccc---c-cCChh------hHHHHHHHHH-HHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC-----CcccCCC
Confidence 00000 0 00000 0011111111 111111 11 15666666665554 2221 1
Q ss_pred CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEE
Q 012412 233 SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLW 312 (464)
Q Consensus 233 ~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 312 (464)
++.++||..... .+..+|....+++++||+++||......+.+..+++++++.+.+++|
T Consensus 223 ~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~ 281 (415)
T 3rsc_A 223 RFVFVGPCFDDR---------------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVM 281 (415)
T ss_dssp TEEECCCCCCCC---------------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred ceEEeCCCCCCc---------------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 478888875541 11122433345678999999999876778899999999999999999
Q ss_pred EEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHH
Q 012412 313 VVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYIL 392 (464)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~ 392 (464)
.++.... .+.+. . .++|+++.+|+|+.++|++||+ ||||||.||++||+++|+|+|++|...||..||++++
T Consensus 282 ~~g~~~~---~~~l~-~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~ 353 (415)
T 3rsc_A 282 TLGGQVD---PAALG-D--LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVD 353 (415)
T ss_dssp ECTTTSC---GGGGC-C--CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHH
T ss_pred EeCCCCC---hHHhc-C--CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHH
Confidence 8875421 12222 1 6789999999999999999999 9999999999999999999999999999999999999
Q ss_pred hHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 393 DVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 393 ~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
+. |+|..+. +++++.|.++|.++|+|+ +++++++++++.+.+
T Consensus 354 ~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 397 (415)
T 3rsc_A 354 QL-GLGAVLPGEKADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR 397 (415)
T ss_dssp HH-TCEEECCGGGCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH
T ss_pred Hc-CCEEEcccCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 99 9999998 789999999999999997 999999999999885
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.2e-41 Score=330.92 Aligned_cols=356 Identities=12% Similarity=0.089 Sum_probs=246.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC--ccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ--AESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~ 91 (464)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+. ..|+.+++++..... .... .......+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~----~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 75 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLA----EVGVPHVPVGLPQHM-MLQEGMPPPPPEEEQR 75 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HHTCCEEECSCCGGG-CCCTTSCCCCHHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH----HcCCeeeecCCCHHH-HHhhccccchhHHHHH
Confidence 69999999999999999999999999999999999988777666 568999998854321 1110 0111111222
Q ss_pred HHHhCcHHHHHHHHHhcC-CCCCccEEEeCC-chhh--HHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCc
Q 012412 92 FWQIGPQTLTELVEKMNG-SDSPVDCIVYDS-ILLW--ALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (464)
+.. ..+..+++.+.+ ..+ +|+||+|. +..+ +..+|+.+|||++.+.+++.... .
T Consensus 76 ~~~---~~~~~~~~~l~~~~~~-pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------------~---- 133 (416)
T 1rrv_A 76 LAA---MTVEMQFDAVPGAAEG-CAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------------S---- 133 (416)
T ss_dssp HHH---HHHHHHHHHHHHHTTT-CSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------C----
T ss_pred HHH---HHHHHHHHHHHHHhcC-CCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC--------------C----
Confidence 211 112333333331 224 59999996 4566 88999999999999877652211 0
Q ss_pred eeCC-CCCCCCC-CC-CCCccc-c-CC------CCchHHHHHHHHHhh---------hccCCcEEEecchhhhhHHHHHH
Q 012412 168 ILLP-GMPPLEP-QD-MPSFIH-D-LG------SYPAVSYMMMKFQFE---------NIDKADWVLCNTFYELEEEVVEW 227 (464)
Q Consensus 168 ~~~p-~~p~~~~-~~-~~~~~~-~-~~------~~~~~~~~~~~~~~~---------~~~~~~~~l~~s~~~l~~~~~~~ 227 (464)
.++| ..+ +.. .. ...... . .. ....... +. +.+. ..... .++++++++++++
T Consensus 134 ~~~p~~~~-~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~-~~-~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~---- 205 (416)
T 1rrv_A 134 PHLPPAYD-EPTTPGVTDIRVLWEERAARFADRYGPTLNR-RR-AEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL---- 205 (416)
T ss_dssp SSSCCCBC-SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHH-HH-HHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC----
T ss_pred cccCCCCC-CCCCchHHHHHHHHHHHHHHHHHHhHHHHHH-HH-HHcCCCCCCchhhhccCC-CeEEccCccccCC----
Confidence 0011 000 000 00 000000 0 00 0000001 11 1110 01122 5788888877641
Q ss_pred HHhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhhC
Q 012412 228 LRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKSS 306 (464)
Q Consensus 228 ~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~ 306 (464)
....++++|||+..+.. .+.+.++.+|++.. +++|||++||... ...+.+..+++++++.
T Consensus 206 -~~~~~~~~vG~~~~~~~----------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~ 266 (416)
T 1rrv_A 206 -QPDVDAVQTGAWLLSDE----------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ 266 (416)
T ss_dssp -CSSCCCEECCCCCCCCC----------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHT
T ss_pred -CCCCCeeeECCCccCcc----------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHC
Confidence 11126789998866511 01247788999753 5789999999863 4567888999999999
Q ss_pred CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhh
Q 012412 307 DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQST 386 (464)
Q Consensus 307 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~ 386 (464)
+.+++|+++..... . .. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..
T Consensus 267 ~~~~v~~~g~~~~~-~-----~~--~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 336 (416)
T 1rrv_A 267 GRRVILSRGWTELV-L-----PD--DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPY 336 (416)
T ss_dssp TCCEEEECTTTTCC-C-----SC--CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHH
T ss_pred CCeEEEEeCCcccc-c-----cC--CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHH
Confidence 99999998765322 1 11 6789999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 387 NAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 387 na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
||+++++. |+|+.++ +++.+.|.++|+++ .|+ +++++++++++.+++
T Consensus 337 na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 337 FAGRVAAL-GIGVAHDGPTPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHHH-TSEEECSSSCCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC
T ss_pred HHHHHHHC-CCccCCCCCCCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh
Confidence 99999999 9999987 78999999999999 886 999999999988873
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.1e-39 Score=319.36 Aligned_cols=374 Identities=18% Similarity=0.269 Sum_probs=256.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCC---CCccCHHHH
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGY---AQAESIEAY 88 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~ 88 (464)
+|+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+. ..|+.+.+++...+.... .........
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVK----AAGAEVVLYKSEFDTFHVPEVVKQEDAETQ 78 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH----HTTCEEEECCCGGGTSSSSSSSCCTTHHHH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHH----HcCCEEEecccccccccccccccccchHHH
Confidence 4579999999999999999999999999999999999988888877 678999998754332110 112233444
Q ss_pred HHH-HHHhCcHHHHHHHHHhcCCCCCccEEEeC-CchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 89 LER-FWQIGPQTLTELVEKMNGSDSPVDCIVYD-SILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 89 ~~~-~~~~~~~~l~~~~~~l~~~~~p~DlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
+.. +.......+..+.+.+. +++| |+||+| .+..++..+|+.+|||++.+.+...... ....
T Consensus 79 ~~~~~~~~~~~~~~~l~~~l~-~~~p-D~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~--------~~~~------ 142 (402)
T 3ia7_A 79 LHLVYVRENVAILRAAEEALG-DNPP-DLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANE--------HYSL------ 142 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCC-SEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBT--------TBCH------
T ss_pred HHHHHHHHHHHHHHHHHHHHh-ccCC-CEEEECchHHHHHHHHHHhhCCCEEEEecccccCc--------cccc------
Confidence 444 44433334445544443 4466 999999 7888899999999999998765431100 0000
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhc----------cC-CcEEEecchhhhhHHHHHHHHhc--CC
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI----------DK-ADWVLCNTFYELEEEVVEWLRKT--WS 233 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~l~~s~~~l~~~~~~~~~~~--~~ 233 (464)
.+.+........+. ....+...+. +..... .. .+..++...+++++ .... .+
T Consensus 143 ---~~~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~ 207 (402)
T 3ia7_A 143 ---FKELWKSNGQRHPA------DVEAVHSVLV-DLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQP-----FAETFDER 207 (402)
T ss_dssp ---HHHHHHHHTCCCGG------GSHHHHHHHH-HHHHTTTCCSCHHHHHTCCCSCEEESSCGGGST-----TGGGCCTT
T ss_pred ---cccccccccccChh------hHHHHHHHHH-HHHHHcCCCCChhhhhcCCCCeEEEEcChHhCC-----ccccCCCC
Confidence 00000000000000 0011111111 111110 11 14556666555554 1111 14
Q ss_pred eeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE
Q 012412 234 LRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313 (464)
Q Consensus 234 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 313 (464)
+.++||..... .+...|....+++++||+++||......+.+..+++++++.+.++++.
T Consensus 208 ~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (402)
T 3ia7_A 208 FAFVGPTLTGR---------------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMA 266 (402)
T ss_dssp EEECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred eEEeCCCCCCc---------------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 78888875541 112234433456789999999998777788999999999999899888
Q ss_pred EcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCC-ccchhhHHHHHH
Q 012412 314 VRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQ-WSDQSTNAKYIL 392 (464)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~-~~DQ~~na~rl~ 392 (464)
++.... .+.+. . .++|+++.+|+|+.++|++||+ ||||||.||++||+++|+|+|++|. ..||..||++++
T Consensus 267 ~g~~~~---~~~~~-~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~ 338 (402)
T 3ia7_A 267 IGGFLD---PAVLG-P--LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVI 338 (402)
T ss_dssp CCTTSC---GGGGC-S--CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHH
T ss_pred eCCcCC---hhhhC-C--CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHH
Confidence 875421 12222 1 6789999999999999999999 9999999999999999999999999 999999999999
Q ss_pred hHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 393 DVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 393 ~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+. |+|..+. +++++.|.+++.++|+|+ +++++++++++.+.+ +++..+ +.+.++++.
T Consensus 339 ~~-g~g~~~~~~~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~-~~~~i~~~~ 397 (402)
T 3ia7_A 339 EL-GLGSVLRPDQLEPASIREAVERLAADS---AVRERVRRMQRDILS----SGGPAR-AADEVEAYL 397 (402)
T ss_dssp HT-TSEEECCGGGCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHHH-HHHHHHHHH
T ss_pred Hc-CCEEEccCCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CChHHH-HHHHHHHHH
Confidence 99 9999998 789999999999999997 999999999988874 344344 444444443
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.5e-40 Score=325.80 Aligned_cols=363 Identities=15% Similarity=0.149 Sum_probs=241.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.+. ..|+.+.+++....................+.
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~----~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCA----EVGVPMVPVGRAVRAGAREPGELPPGAAEVVT 76 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHH----HTTCCEEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH----HcCCceeecCCCHHHHhccccCCHHHHHHHHH
Confidence 68999999999999999999999999999999999998888887 67899999975433100000000000111111
Q ss_pred HhCcHHHHHHHHHhcCCCCCccEEEeCCchhhH---HHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCceeC
Q 012412 94 QIGPQTLTELVEKMNGSDSPVDCIVYDSILLWA---LDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEILL 170 (464)
Q Consensus 94 ~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 170 (464)
......++++...+ + +| |+||+|.....+ ..+|+.+|||++.+..+++...+
T Consensus 77 ~~~~~~~~~l~~~~-~--~p-D~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~--------------------- 131 (404)
T 3h4t_A 77 EVVAEWFDKVPAAI-E--GC-DAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS--------------------- 131 (404)
T ss_dssp HHHHHHHHHHHHHH-T--TC-SEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG---------------------
T ss_pred HHHHHHHHHHHHHh-c--CC-CEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC---------------------
Confidence 11112222222222 2 34 999998665434 78899999999988776632110
Q ss_pred CCCCCCCCCCCCCccccCCCCchHHHHHH---HHHhhhc--c---------CCcEEEecchhhhhHHHHHHHHhcCCeee
Q 012412 171 PGMPPLEPQDMPSFIHDLGSYPAVSYMMM---KFQFENI--D---------KADWVLCNTFYELEEEVVEWLRKTWSLRT 236 (464)
Q Consensus 171 p~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~---------~~~~~l~~s~~~l~~~~~~~~~~~~~~~~ 236 (464)
+.. .......+ ....+.+. .+..... . ..+..+.+..+.+.+.. +...++.+
T Consensus 132 ~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~----~~~~~~~~ 197 (404)
T 3h4t_A 132 EQS---------QAERDMYN-QGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLR----PTDLGTVQ 197 (404)
T ss_dssp GSC---------HHHHHHHH-HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC----TTCCSCCB
T ss_pred hhH---------HHHHHHHH-HHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCC----CCCCCeEE
Confidence 000 00000000 00000000 0000000 0 01112333333332200 00012445
Q ss_pred ecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcC
Q 012412 237 IGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE 316 (464)
Q Consensus 237 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 316 (464)
+|+...+. ..+.++++.+|++. ++++|||++||... +.+.+..+++++++.+.+++|+++.
T Consensus 198 ~G~~~~~~----------------~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 198 TGAWILPD----------------QRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp CCCCCCCC----------------CCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred eCccccCC----------------CCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 55443220 11235788889884 56799999999977 7788999999999999999999876
Q ss_pred cccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc
Q 012412 317 SEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK 396 (464)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G 396 (464)
...... . .++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||+++++. |
T Consensus 259 ~~~~~~-~-------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G 327 (404)
T 3h4t_A 259 AGLGRI-D-------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-G 327 (404)
T ss_dssp TTCCCS-S-------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-T
T ss_pred cccccc-c-------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-C
Confidence 532221 1 5789999999999999999999 999999999999999999999999999999999999999 9
Q ss_pred ceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012412 397 TGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLAC 459 (464)
Q Consensus 397 ~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~ 459 (464)
+|..+. +++.+.|.++|+++|+ + +|+++++++++.+++ ...+.+.+.++++..
T Consensus 328 ~g~~l~~~~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 328 VGVAHDGPTPTVESLSAALATALT-P---GIRARAAAVAGTIRT------DGTTVAAKLLLEAIS 382 (404)
T ss_dssp SEEECSSSSCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCCC------CHHHHHHHHHHHHHH
T ss_pred CEeccCcCCCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHhh------hHHHHHHHHHHHHHh
Confidence 999998 7899999999999998 7 999999999998862 334444455554443
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.1e-39 Score=325.21 Aligned_cols=376 Identities=14% Similarity=0.143 Sum_probs=241.6
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCC----------
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGG---------- 78 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------- 78 (464)
....+|||+|++.++.||++|+++||++|+++||+|+|++++...+.+. ..|+.+++++...+...
T Consensus 16 ~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~----~~G~~~~~i~~~~~~~~~~~~~~~~~~ 91 (441)
T 2yjn_A 16 PRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDIT----AAGLTAVPVGTDVDLVDFMTHAGHDII 91 (441)
T ss_dssp ---CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHH----TTTCCEEECSCCCCHHHHHHHTTHHHH
T ss_pred ccCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHH----hCCCceeecCCccchHHHhhhhhcccc
Confidence 4456789999999999999999999999999999999999988877777 67899999985431000
Q ss_pred -----CC-----Cc-cCHH---HHHHHHHHhCc-----H-HHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccE
Q 012412 79 -----YA-----QA-ESIE---AYLERFWQIGP-----Q-TLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGA 138 (464)
Q Consensus 79 -----~~-----~~-~~~~---~~~~~~~~~~~-----~-~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v 138 (464)
.+ .. .... .....+..... . .+.++++.+.+ ++| |+||+|.++.++..+|+.+|||++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~p-DlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 92 DYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-WRP-DLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-HCC-SEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-cCC-CEEEecCcchhHHHHHHHcCCCEE
Confidence 00 00 0111 11111211111 2 34444443332 255 999999887889999999999999
Q ss_pred EEecchHHHHHHHhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhcc---------CC
Q 012412 139 PFLTQSCAVDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENID---------KA 209 (464)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 209 (464)
.+...+.........+.... .+.|.. . . ...+.+.+. +....+. ..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~---~------~------~~~~~~~l~-~~~~~~g~~~~~~~~~~~ 224 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLGLL---------PDQPEE---H------R------EDPLAEWLT-WTLEKYGGPAFDEEVVVG 224 (441)
T ss_dssp EECSSCCHHHHHHHHHHHHG---------GGSCTT---T------C------CCHHHHHHH-HHHHHTTCCCCCGGGTSC
T ss_pred EEecCCCcchhhhhhhhhhc---------cccccc---c------c------cchHHHHHH-HHHHHcCCCCCCccccCC
Confidence 98655432211111100000 001100 0 0 011222222 2111111 12
Q ss_pred cEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc
Q 012412 210 DWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV 289 (464)
Q Consensus 210 ~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~ 289 (464)
+..+....+.+++ +... +...+++... . .+.++.+|++..+++++|||++||..
T Consensus 225 ~~~l~~~~~~~~~-----~~~~-~~~~~~~~~~-------------------~-~~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 225 QWTIDPAPAAIRL-----DTGL-KTVGMRYVDY-------------------N-GPSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp SSEEECSCGGGSC-----CCCC-CEEECCCCCC-------------------C-SSCCCCGGGSSCCSSCEEEEEC----
T ss_pred CeEEEecCccccC-----CCCC-CCCceeeeCC-------------------C-CCcccchHhhcCCCCCEEEEECCCCc
Confidence 2233333332221 0000 0011111100 0 12334568875566789999999987
Q ss_pred cC---CHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHH
Q 012412 290 EL---KAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTM 366 (464)
Q Consensus 290 ~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~ 366 (464)
.. ..+.+..+++++++.+.+++|++++...+.+.. .++|+++.+|+|+.++|+.|++ ||||||.||++
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~ 349 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVAN-------IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWH 349 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSS-------CCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHH
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhcc-------CCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHH
Confidence 43 346677888999988999999987643322221 5789999999999999999999 99999999999
Q ss_pred HHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCC
Q 012412 367 EALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGG 444 (464)
Q Consensus 367 eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg 444 (464)
||+++|+|+|++|...||..||+++++. |+|+.++ +++++.|.++|.++|+|+ +++++++++++.+++ ..
T Consensus 350 Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~ 421 (441)
T 2yjn_A 350 TAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVPELTPDQLRESVKRVLDDP---AHRAGAARMRDDMLA----EP 421 (441)
T ss_dssp HHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTTTCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SC
T ss_pred HHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHc----CC
Confidence 9999999999999999999999999999 9999998 689999999999999997 999999999998874 33
Q ss_pred CcHHHHHHHHHHHHh
Q 012412 445 SSDSNIDEFVASLAC 459 (464)
Q Consensus 445 ~~~~~~~~~~~~l~~ 459 (464)
+ .+.+.+.++++..
T Consensus 422 ~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 422 S-PAEVVGICEELAA 435 (441)
T ss_dssp C-HHHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHH
Confidence 3 4444555555443
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8.7e-39 Score=317.89 Aligned_cols=366 Identities=19% Similarity=0.221 Sum_probs=244.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCC----ccCHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQ----AESIE 86 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~ 86 (464)
+++|||+|++.++.||++|+++|+++|+++||+|++++++...+.+. ..|+.+++++...+. .... ..+..
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVA----ATGPRPVLYHSTLPG-PDADPEAWGSTLL 79 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----TTSCEEEECCCCSCC-TTSCGGGGCSSHH
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHH----hCCCEEEEcCCcCcc-ccccccccchhhH
Confidence 45789999999999999999999999999999999999988766666 568999998865432 1111 12333
Q ss_pred HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
..+..+.......+..+.+.+. +.+| |+||+|.+..++..+|+.+|||++.+.+.......+...+..+...
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~-~~~p-D~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~------ 151 (430)
T 2iyf_A 80 DNVEPFLNDAIQALPQLADAYA-DDIP-DLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR------ 151 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TSCC-SEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-ccCC-CEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh------
Confidence 3333333322333344444333 3355 9999998777899999999999998876542000000000000000
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHh------hhccCCcEEEecchhhhhHHHHHHHHhcCC-eeeecc
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQF------ENIDKADWVLCNTFYELEEEVVEWLRKTWS-LRTIGP 239 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~-~~~vgp 239 (464)
. .... .. ... ....+.+.+. +.. ......+.+++++.+++++.... . ..+ +++|||
T Consensus 152 ~--~~~~--------~~-~~~--~~~~~~~~~~-~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~--~~~~v~~vG~ 214 (430)
T 2iyf_A 152 E--PRQT--------ER-GRA--YYARFEAWLK-ENGITEHPDTFASHPPRSLVLIPKALQPHADR-V--DEDVYTFVGA 214 (430)
T ss_dssp H--HHHS--------HH-HHH--HHHHHHHHHH-HTTCCSCHHHHHHCCSSEEECSCGGGSTTGGG-S--CTTTEEECCC
T ss_pred h--hccc--------hH-HHH--HHHHHHHHHH-HhCCCCCHHHHhcCCCcEEEeCcHHhCCCccc-C--CCccEEEeCC
Confidence 0 0000 00 000 0000111111 100 01114567888888877752111 1 124 888997
Q ss_pred cCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcc
Q 012412 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESE 318 (464)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~ 318 (464)
.++... +..+|....+++++||+++||......+.+..+++++++. +.+++|+++...
T Consensus 215 ~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~ 273 (430)
T 2iyf_A 215 CQGDRA---------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKV 273 (430)
T ss_dssp CC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---
T ss_pred cCCCCC---------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 644200 0012333234678999999999855678899999999886 788888887542
Q ss_pred cCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcce
Q 012412 319 QAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g 398 (464)
. .+.+. . .++|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..|++++++. |+|
T Consensus 274 ~---~~~l~-~--~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g 344 (430)
T 2iyf_A 274 T---PAELG-E--LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVA 344 (430)
T ss_dssp C---GGGGC-S--CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSE
T ss_pred C---hHHhc-c--CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCE
Confidence 1 12221 1 5789999999999999999999 999999999999999999999999999999999999999 999
Q ss_pred eecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Q 012412 399 LKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEA 439 (464)
Q Consensus 399 ~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~ 439 (464)
+.+. +++.++|.++|.++|+|+ ++++++.++++.+.+.
T Consensus 345 ~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 345 RKLATEEATADLLRETALALVDDP---EVARRLRRIQAEMAQE 384 (430)
T ss_dssp EECCCC-CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHhc
Confidence 9997 679999999999999997 8999999998888753
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.9e-38 Score=307.77 Aligned_cols=357 Identities=17% Similarity=0.160 Sum_probs=241.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCC-----------CCCCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG-----------GYAQA 82 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~ 82 (464)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+. ..|+.++.++...... .....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVT----GVGLPAVATTDLPIRHFITTDREGRPEAIPSD 76 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCCEEESCSSCHHHHHHBCTTSCBCCCCCS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHH----hCCCEEEEeCCcchHHHHhhhcccCccccCcc
Confidence 69999999999999999999999999999999999987666666 5678888887532000 00010
Q ss_pred cCHHHHH-HH-HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCccc
Q 012412 83 ESIEAYL-ER-FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLE 160 (464)
Q Consensus 83 ~~~~~~~-~~-~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 160 (464)
......+ .. +.......+.++.+.+.+ .+| |+||+|.+..++..+|+.+|||++.+...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~p-D~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~--------------- 139 (384)
T 2p6p_A 77 PVAQARFTGRWFARMAASSLPRMLDFSRA-WRP-DLIVGGTMSYVAPLLALHLGVPHARQTWDAV--------------- 139 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCC-SEEEEETTCTHHHHHHHHHTCCEEEECCSSC---------------
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHhc-cCC-cEEEECcchhhHHHHHHhcCCCEEEeccCCc---------------
Confidence 0111111 21 111112223333333322 245 9999998778888999999999998653320
Q ss_pred CCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHH-hhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecc
Q 012412 161 LPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQ-FENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGP 239 (464)
Q Consensus 161 ~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp 239 (464)
.+ . ..... ......+.+. +. .......+.+++++.+.+++. ... +...++.
T Consensus 140 ---------~~-------~---~~~~~--~~~~~~~~~~-~~g~~~~~~~~~~l~~~~~~~~~~-----~~~-~~~~~~~ 191 (384)
T 2p6p_A 140 ---------DA-------D---GIHPG--ADAELRPELS-ELGLERLPAPDLFIDICPPSLRPA-----NAA-PARMMRH 191 (384)
T ss_dssp ---------CC-------T---TTHHH--HHHHTHHHHH-HTTCSSCCCCSEEEECSCGGGSCT-----TSC-CCEECCC
T ss_pred ---------cc-------c---hhhHH--HHHHHHHHHH-HcCCCCCCCCCeEEEECCHHHCCC-----CCC-CCCceEe
Confidence 00 0 00000 0001111111 11 011111467888887766541 111 1111221
Q ss_pred cCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC-----CHHHHHHHHHHHhhCCCeEEEEE
Q 012412 240 TIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-----KAEEMEELAWGLKSSDQHFLWVV 314 (464)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i~~~ 314 (464)
+... .+.++.+|++..+++++||+++||.... +.+.+..+++++++.+.+++|++
T Consensus 192 ~~~~--------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 251 (384)
T 2p6p_A 192 VATS--------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAA 251 (384)
T ss_dssp CCCC--------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEEC
T ss_pred cCCC--------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEe
Confidence 1000 0123345776545678999999998754 45778899999999999999988
Q ss_pred cCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhH
Q 012412 315 RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDV 394 (464)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~ 394 (464)
++... +.+. . .++|+.+ +|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..||+++++.
T Consensus 252 g~~~~----~~l~-~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~ 321 (384)
T 2p6p_A 252 PDTVA----EALR-A--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY 321 (384)
T ss_dssp CHHHH----HHHH-H--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH
T ss_pred CCCCH----HhhC-C--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC
Confidence 75321 2222 1 5789999 99999999999999 999999999999999999999999999999999999999
Q ss_pred hcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 395 WKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 395 ~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
|+|+.++ +.+.++|.++|.++|.|+ +++++++++++.+++ ..+.++.++.+.+.+
T Consensus 322 -g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 322 -GAAIALLPGEDSTEAIADSCQELQAKD---TYARRAQDLSREISG----MPLPATVVTALEQLA 378 (384)
T ss_dssp -TSEEECCTTCCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCCHHHHHHHHHHHH
T ss_pred -CCeEecCcCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----CCCHHHHHHHHHHHh
Confidence 9999987 679999999999999997 999999999999985 344444444444333
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=3.1e-38 Score=310.68 Aligned_cols=345 Identities=15% Similarity=0.166 Sum_probs=221.5
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCC--------C--
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEG--------G-- 78 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~-- 78 (464)
.+..+|||+|++.++.||++|+++|+++|+++||+|++++++...+.+. ..|+.+..++...... .
T Consensus 11 ~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 11 PRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVT----GAGLPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp ----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHH----HTTCCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHH----hCCCeeEecCCccchHhhhhhhccCcc
Confidence 3455799999999999999999999999999999999999988777777 6788888887321100 0
Q ss_pred CCCccCH----HHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhh
Q 012412 79 YAQAESI----EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHV 154 (464)
Q Consensus 79 ~~~~~~~----~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 154 (464)
....... ......+.......+.++.+.+. +++| |+||+|....++..+|+.+|||++.+.........
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~p-DlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~----- 159 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAE-RWKP-DLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL----- 159 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCC-SEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH-----
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCCC-CEEEECccccHHHHHHHhhCCCEEEeccCCCCchh-----
Confidence 0000011 11112222222222223333222 2356 99999987788999999999999986544310000
Q ss_pred hcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhh-----ccCCcEEEecchhhhhHHHHHHHH
Q 012412 155 KKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN-----IDKADWVLCNTFYELEEEVVEWLR 229 (464)
Q Consensus 155 ~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~l~~~~~~~~~ 229 (464)
. ......++. ..... ....+..+....+.+....
T Consensus 160 -----------------------------~------~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 198 (398)
T 4fzr_A 160 -----------------------------I------KSAGVGELA-PELAELGLTDFPDPLLSIDVCPPSMEAQP----- 198 (398)
T ss_dssp -----------------------------H------HHHHHHHTH-HHHHTTTCSSCCCCSEEEECSCGGGC--------
T ss_pred -----------------------------h------hHHHHHHHH-HHHHHcCCCCCCCCCeEEEeCChhhCCCC-----
Confidence 0 001111111 11111 1122344444444443210
Q ss_pred hcCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC--------CHHHHHHHHH
Q 012412 230 KTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--------KAEEMEELAW 301 (464)
Q Consensus 230 ~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~ 301 (464)
. ...+.+...... ....++.+|+...+++++||+++|+.... ..+.+..+++
T Consensus 199 ~-~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 4fzr_A 199 K-PGTTKMRYVPYN-------------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQ 258 (398)
T ss_dssp --CCCEECCCCCCC-------------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHH
T ss_pred C-CCCCCeeeeCCC-------------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHH
Confidence 0 011111100000 01123345665545778999999998632 3466888999
Q ss_pred HHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCc
Q 012412 302 GLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW 381 (464)
Q Consensus 302 al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~ 381 (464)
++++.+.+++|+.++...+.+.. .++|+++.+|+|+.++|++|++ ||||||.||++||+++|+|+|++|..
T Consensus 259 al~~~~~~~v~~~~~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~ 329 (398)
T 4fzr_A 259 ELPKLGFEVVVAVSDKLAQTLQP-------LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVI 329 (398)
T ss_dssp HGGGGTCEEEECCCC---------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred HHHhCCCEEEEEeCCcchhhhcc-------CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCc
Confidence 99999999999887653222221 6899999999999999999999 99999999999999999999999999
Q ss_pred cchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Q 012412 382 SDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 382 ~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~ 438 (464)
.||..|++++++. |+|+.++ +++++.|.++|.++|+|+ ++++++++.++.+.+
T Consensus 330 ~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 330 AEVWDSARLLHAA-GAGVEVPWEQAGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp GGGHHHHHHHHHT-TSEEECC-------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 9999999999999 9999998 779999999999999998 999999999998874
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.9e-36 Score=297.89 Aligned_cols=353 Identities=16% Similarity=0.148 Sum_probs=235.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCC--------------
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDE-------------- 76 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------- 76 (464)
.++|||+|++.++.||++|+++|+++|+++||+|+++++ ...+.+. ..|+.+.+++.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAA----AAGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHH----TTTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHH----hCCCeeEecCCccCHHHHhhhcccCCccc
Confidence 346899999999999999999999999999999999999 7777777 788999999843210
Q ss_pred ------CCCCCccCHHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHH
Q 012412 77 ------GGYAQAESIEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYI 150 (464)
Q Consensus 77 ------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (464)
............+..........+.+++++. +| |+||+|....++..+|+.+|||++.+......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~p-DlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~---- 163 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----RP-DLVVYEQGATVGLLAADRAGVPAVQRNQSAWR---- 163 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----CC-SEEEEETTCHHHHHHHHHHTCCEEEECCTTCC----
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----CC-CEEEECchhhHHHHHHHHcCCCEEEEeccCCC----
Confidence 0011111222222222222223333443332 55 99999988888999999999999876433200
Q ss_pred HhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh
Q 012412 151 YYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK 230 (464)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~ 230 (464)
. ....... ...+...+. +..-.....+..+....+.+.. ...
T Consensus 164 --------------------------~-~~~~~~~-----~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~ 205 (398)
T 3oti_A 164 --------------------------T-RGMHRSI-----ASFLTDLMD-KHQVSLPEPVATIESFPPSLLL-----EAE 205 (398)
T ss_dssp --------------------------C-TTHHHHH-----HTTCHHHHH-HTTCCCCCCSEEECSSCGGGGT-----TSC
T ss_pred --------------------------c-cchhhHH-----HHHHHHHHH-HcCCCCCCCCeEEEeCCHHHCC-----CCC
Confidence 0 0000000 000111111 1111112223334333333321 000
Q ss_pred cCCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC--CHHHHHHHHHHHhhCCC
Q 012412 231 TWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL--KAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 231 ~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~ 308 (464)
...+.+... +.. .......|+...+++++||+++||.... ..+.+..+++++++.+.
T Consensus 206 -~~~~~~~~~----------~~~----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~ 264 (398)
T 3oti_A 206 -PEGWFMRWV----------PYG----------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA 264 (398)
T ss_dssp -CCSBCCCCC----------CCC----------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS
T ss_pred -CCCCCcccc----------CCC----------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC
Confidence 000000000 000 0122334555445788999999999632 56778889999999999
Q ss_pred eEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHH
Q 012412 309 HFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNA 388 (464)
Q Consensus 309 ~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na 388 (464)
+++|+.++.....+.. .++|+++.+|+|+.++|++|++ ||||||.||++||+++|+|+|++|...||..||
T Consensus 265 ~~v~~~g~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a 335 (398)
T 3oti_A 265 DFVLALGDLDISPLGT-------LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHT 335 (398)
T ss_dssp EEEEECTTSCCGGGCS-------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCT
T ss_pred EEEEEECCcChhhhcc-------CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHH
Confidence 9999987753222221 6789999999999999999999 999999999999999999999999999999999
Q ss_pred --HHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 389 --KYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 389 --~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
.++++. |+|+.++ +.+++.|. ++|+|+ +++++++++++.+.+ ..+.+.+.+.++++.
T Consensus 336 ~~~~~~~~-g~g~~~~~~~~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 336 AREAVSRR-GIGLVSTSDKVDADLLR----RLIGDE---SLRTAAREVREEMVA-----LPTPAETVRRIVERI 396 (398)
T ss_dssp THHHHHHH-TSEEECCGGGCCHHHHH----HHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHH
T ss_pred HHHHHHHC-CCEEeeCCCCCCHHHHH----HHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHh
Confidence 999999 9999998 67887777 888897 999999999999884 333455555555553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=4.5e-35 Score=287.46 Aligned_cols=354 Identities=15% Similarity=0.133 Sum_probs=234.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEc-cCCCCCC-----CCC------
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAI-SDGYDEG-----GYA------ 80 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-----~~~------ 80 (464)
.|||+|++.++.||++|++.|+++|+++||+|++++++...+.+. ..|+.+..+ +...... ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAH----GAGLTTAGIRGNDRTGDTGGTTQLRFPNPAF 76 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHH----HBTCEEEEC--------------CCSCCGGG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHH----hCCCceeeecCCccchhhhhhhccccccccc
Confidence 379999999999999999999999999999999999987777676 678888888 4221100 000
Q ss_pred ---CccCHHHHHHHHHHhC----cHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhh
Q 012412 81 ---QAESIEAYLERFWQIG----PQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYH 153 (464)
Q Consensus 81 ---~~~~~~~~~~~~~~~~----~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 153 (464)
........+....... ...+.++.+.+. +++| |+||+|....++..+|+.+|||++.+.......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~P-D~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~------ 148 (391)
T 3tsa_A 77 GQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAE-AWRP-SVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT------ 148 (391)
T ss_dssp GCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCC-SEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT------
T ss_pred ccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHH-hcCC-CEEEeCcchhHHHHHHHHhCCCEEEEecCCccc------
Confidence 0011111121111111 000223322222 2356 999999877888999999999998865432000
Q ss_pred hhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhc-----cCCcEEEecchhhhhHHHHHHH
Q 012412 154 VKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENI-----DKADWVLCNTFYELEEEVVEWL 228 (464)
Q Consensus 154 ~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~l~~~~~~~~ 228 (464)
... .......++. +....+ ...+.++....++++. .
T Consensus 149 ----------------------------~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 189 (391)
T 3tsa_A 149 ----------------------------AGP-----FSDRAHELLD-PVCRHHGLTGLPTPELILDPCPPSLQA-----S 189 (391)
T ss_dssp ----------------------------TTH-----HHHHHHHHHH-HHHHHTTSSSSCCCSEEEECSCGGGSC-----T
T ss_pred ----------------------------ccc-----ccchHHHHHH-HHHHHcCCCCCCCCceEEEecChhhcC-----C
Confidence 000 0011222222 222111 1124444444443332 0
Q ss_pred HhcC--CeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc--CC-HHHHHHHHHHH
Q 012412 229 RKTW--SLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE--LK-AEEMEELAWGL 303 (464)
Q Consensus 229 ~~~~--~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~al 303 (464)
.... ++.++ |.. .......|+...+++++|++++||... .. .+.+..++++
T Consensus 190 ~~~~~~~~~~~-p~~----------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~- 245 (391)
T 3tsa_A 190 DAPQGAPVQYV-PYN----------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA- 245 (391)
T ss_dssp TSCCCEECCCC-CCC----------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-
T ss_pred CCCccCCeeee-cCC----------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-
Confidence 0000 01111 000 012223466554577899999999853 23 7888889998
Q ss_pred hhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccCCcc
Q 012412 304 KSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 304 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
++. +.+++|+.++...+.+.. .++|+++.+|+|+.++|++||+ ||||||.||++||+++|+|+|++|...
T Consensus 246 ~~~p~~~~v~~~~~~~~~~l~~-------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 316 (391)
T 3tsa_A 246 TELPGVEAVIAVPPEHRALLTD-------LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYF 316 (391)
T ss_dssp HTSTTEEEEEECCGGGGGGCTT-------CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCST
T ss_pred ccCCCeEEEEEECCcchhhccc-------CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcc
Confidence 887 788888887653332321 6789999999999999999999 999999999999999999999999999
Q ss_pred chhhHHHHHHhHhcceeeccC----cCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 383 DQSTNAKYILDVWKTGLKFPI----VKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 383 DQ~~na~rl~~~~G~g~~l~~----~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
||..|+.++++. |+|..+.. .+++.|.+++.++|+|+ +++++++++++.+.+ ..+ .+.+.+.++++.
T Consensus 317 ~q~~~a~~~~~~-g~g~~~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 387 (391)
T 3tsa_A 317 DQFDYARNLAAA-GAGICLPDEQAQSDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPH-PAALVRTLENTA 387 (391)
T ss_dssp THHHHHHHHHHT-TSEEECCSHHHHTCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCC-HHHHHHHHHHC-
T ss_pred cHHHHHHHHHHc-CCEEecCcccccCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCC-HHHHHHHHHHHH
Confidence 999999999999 99999975 88999999999999998 999999999988874 343 344555555544
Q ss_pred h
Q 012412 459 C 459 (464)
Q Consensus 459 ~ 459 (464)
.
T Consensus 388 ~ 388 (391)
T 3tsa_A 388 A 388 (391)
T ss_dssp -
T ss_pred h
Confidence 3
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.8e-33 Score=277.90 Aligned_cols=359 Identities=18% Similarity=0.153 Sum_probs=240.6
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCC------------CCC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGY------------DEG 77 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------------~~~ 77 (464)
+..+|||+|++.++.||++|+++|+++|+++||+|++++++...+.+. ..|+.+..++... ...
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLR----KLGFEPVATGMPVFDGFLAALRIRFDTD 92 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHH----HTTCEEEECCCCHHHHHHHHHHHHHSCS
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHH----hcCCceeecCcccccchhhhhhhhhccc
Confidence 345799999999999999999999999999999999999987666666 6689999887410 000
Q ss_pred CC------CCccCHHHHHHHH-HHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHH
Q 012412 78 GY------AQAESIEAYLERF-WQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYI 150 (464)
Q Consensus 78 ~~------~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (464)
.. .........+..+ .......+.+++++. +| |+||+|....++..+|+.+|||++.+......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~p-DvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~---- 163 (412)
T 3otg_A 93 SPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL----RP-DLVVQEISNYGAGLAALKAGIPTICHGVGRDT---- 163 (412)
T ss_dssp CCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH----CC-SEEEEETTCHHHHHHHHHHTCCEEEECCSCCC----
T ss_pred CCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc----CC-CEEEECchhhHHHHHHHHcCCCEEEecccccC----
Confidence 00 0011111111111 111112233333332 55 99999987777889999999999886443200
Q ss_pred HhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhh----------ccCCcEEEecchhhh
Q 012412 151 YYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFEN----------IDKADWVLCNTFYEL 220 (464)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~s~~~l 220 (464)
.++ . ...+.+++. +.... ....+.+++.+...+
T Consensus 164 -------------------~~~-----------~------~~~~~~~~~-~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~ 206 (412)
T 3otg_A 164 -------------------PDD-----------L------TRSIEEEVR-GLAQRLGLDLPPGRIDGFGNPFIDIFPPSL 206 (412)
T ss_dssp -------------------CSH-----------H------HHHHHHHHH-HHHHHTTCCCCSSCCGGGGCCEEECSCGGG
T ss_pred -------------------chh-----------h------hHHHHHHHH-HHHHHcCCCCCcccccCCCCeEEeeCCHHh
Confidence 000 0 011111111 11111 123445666665555
Q ss_pred hHHHHHHHHhcCCeeeecccCCCccccccccCcccccccccccchhHHHHH-hhcCCCCceEEEEecccccCCHHHHHHH
Q 012412 221 EEEVVEWLRKTWSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKW-LNDRAKESVVYVSYGSFVELKAEEMEEL 299 (464)
Q Consensus 221 ~~~~~~~~~~~~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 299 (464)
+...... ......+.+.... ......+| ....+++++|++++|+......+.+..+
T Consensus 207 ~~~~~~~---~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 207 QEPEFRA---RPRRHELRPVPFA--------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp SCHHHHT---CTTEEECCCCCCC--------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred cCCcccC---CCCcceeeccCCC--------------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 4311100 0011111111110 01112234 2222567899999999976678899999
Q ss_pred HHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHHHhCCcEeccC
Q 012412 300 AWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMP 379 (464)
Q Consensus 300 ~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P 379 (464)
++++++.+.+++|++++.. ..+.+.+ .++|+.+.+|+|+.++|+.+|+ ||+|||.+|++||+++|+|+|++|
T Consensus 264 ~~~l~~~~~~~~~~~g~~~---~~~~l~~---~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSL---DVSGLGE---VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp HHHHHTSSSEEEEECCSSC---CCTTCCC---CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHcCCCEEEEEECCCC---Chhhhcc---CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecC
Confidence 9999988999999887753 1222221 6789999999999999999999 999999999999999999999999
Q ss_pred CccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012412 380 QWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASL 457 (464)
Q Consensus 380 ~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l 457 (464)
...||..|+.++++. |+|..++ ++++++|.+++.++|+|+ ++++++.+.++.+.+ ..+ .+.+.+.++++
T Consensus 336 ~~~~q~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~l 406 (412)
T 3otg_A 336 WAGDSFANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA----MPG-PDEVVRLLPGF 406 (412)
T ss_dssp CSTTHHHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----SCC-HHHHHTTHHHH
T ss_pred CchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc----CCC-HHHHHHHHHHH
Confidence 999999999999999 9999998 679999999999999997 899999988888875 343 34444444444
Q ss_pred H
Q 012412 458 A 458 (464)
Q Consensus 458 ~ 458 (464)
.
T Consensus 407 ~ 407 (412)
T 3otg_A 407 A 407 (412)
T ss_dssp H
T ss_pred h
Confidence 3
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.98 E-value=1.3e-30 Score=252.32 Aligned_cols=305 Identities=15% Similarity=0.149 Sum_probs=195.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc--ccccCCCCCCceEEEccCC-CCCCC-CCCccCHHHHHH
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK--SLHRDSSSSSIPLEAISDG-YDEGG-YAQAESIEAYLE 90 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~-~~~~~-~~~~~~~~~~~~ 90 (464)
||++...|+.||++|+++||++|+++||+|+|++++...+ .+. ..|+.++.++.. +.... ......+...+.
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~----~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 79 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVP----KAGLPLHLIQVSGLRGKGLKSLVKAPLELLK 79 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTG----GGTCCEEECC--------------CHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhh----hcCCcEEEEECCCcCCCCHHHHHHHHHHHHH
Confidence 8999888888999999999999999999999999865432 344 567888888732 11100 111112222222
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
.+. ....++++. +| |+||++..+ ..+..+|+.+|||+++...+.
T Consensus 80 ~~~-----~~~~~l~~~----~P-DvVi~~g~~~s~p~~laA~~~~iP~vihe~n~------------------------ 125 (365)
T 3s2u_A 80 SLF-----QALRVIRQL----RP-VCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA------------------------ 125 (365)
T ss_dssp HHH-----HHHHHHHHH----CC-SEEEECSSSTHHHHHHHHHHTTCCEEEEECSS------------------------
T ss_pred HHH-----HHHHHHHhc----CC-CEEEEcCCcchHHHHHHHHHcCCCEEEEecch------------------------
Confidence 221 133444443 56 999998655 335678999999999754332
Q ss_pred eCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccccc
Q 012412 169 LLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLDK 248 (464)
Q Consensus 169 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~~ 248 (464)
+||. .++++. +.++.++. ++++..+ ...+..++|+.+......
T Consensus 126 -~~G~--------------------~nr~l~-------~~a~~v~~-~~~~~~~-------~~~k~~~~g~pvr~~~~~- 168 (365)
T 3s2u_A 126 -VAGT--------------------ANRSLA-------PIARRVCE-AFPDTFP-------ASDKRLTTGNPVRGELFL- 168 (365)
T ss_dssp -SCCH--------------------HHHHHG-------GGCSEEEE-SSTTSSC-------C---CEECCCCCCGGGCC-
T ss_pred -hhhh--------------------HHHhhc-------cccceeee-ccccccc-------CcCcEEEECCCCchhhcc-
Confidence 2221 223322 22334333 3322111 111355666544331110
Q ss_pred cccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC----CCeEEEEEcCcccCcCCh
Q 012412 249 QIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS----DQHFLWVVRESEQAKLPK 324 (464)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~ 324 (464)
. . .......+++++|++..||... ....+.+.++++.+ +..++++++....+...+
T Consensus 169 --~--------------~--~~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~ 228 (365)
T 3s2u_A 169 --D--------------A--HARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAE 228 (365)
T ss_dssp --C--------------T--TSSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHH
T ss_pred --c--------------h--hhhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCccccccccc
Confidence 0 0 0001112456789999998763 23444556666554 346777776543332322
Q ss_pred hhhhhccCCCcEEEEeccChH-HhhccccccceeccCChhHHHHHHHhCCcEeccCCc----cchhhHHHHHHhHhccee
Q 012412 325 KFSDETLTSHKSLVVSWCPQL-EVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNAKYILDVWKTGL 399 (464)
Q Consensus 325 ~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~rl~~~~G~g~ 399 (464)
.+.+ .+.|+.+.+|+++. ++|+.+|+ +|||+|.+|++|++++|+|+|++|.. .+|..||+.+++. |+|.
T Consensus 229 ~~~~---~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~ 302 (365)
T 3s2u_A 229 RYRT---VAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGR 302 (365)
T ss_dssp HHHH---TTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEE
T ss_pred eecc---cccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEE
Confidence 2222 56789999999987 89999999 99999999999999999999999874 5899999999999 9999
Q ss_pred ecc--CcCHHHHHHHHHHHhcCC
Q 012412 400 KFP--IVKRDAIADCISEILEGE 420 (464)
Q Consensus 400 ~l~--~~~~~~l~~~i~~ll~~~ 420 (464)
.++ +++++.|.++|.++|+|+
T Consensus 303 ~l~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 303 LLPQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHCT
T ss_pred EeecCCCCHHHHHHHHHHHHCCH
Confidence 998 889999999999999997
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=203.15 Aligned_cols=159 Identities=21% Similarity=0.405 Sum_probs=138.4
Q ss_pred chhHHHHHhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc
Q 012412 264 STEACMKWLNDRAKESVVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC 342 (464)
Q Consensus 264 ~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~ 342 (464)
+++++.+|++..+++++||+++||.. ..+.+.+..+++++++.+.+++|++++... +. .++|+++.+|+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~----~~------~~~~v~~~~~~ 76 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP----DT------LGLNTRLYKWI 76 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC----TT------CCTTEEEESSC
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc----cc------CCCcEEEecCC
Confidence 46889999987667789999999986 457889999999999989999999876421 11 56899999999
Q ss_pred ChHHhh--ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhc
Q 012412 343 PQLEVL--AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILE 418 (464)
Q Consensus 343 p~~~ll--~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~ 418 (464)
|+.+++ +.+++ ||||||.+|++||+++|+|+|++|...||..||+++++. |+|+.++ +++.+.|.++|.+++.
T Consensus 77 ~~~~~l~~~~ad~--~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 77 PQNDLLGHPKTRA--FITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp CHHHHHTSTTEEE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHhcCCCcCE--EEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccccCCHHHHHHHHHHHHc
Confidence 999999 77887 999999999999999999999999999999999999999 9999998 7899999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHH
Q 012412 419 GERGKELRRNAGKWRKLAKE 438 (464)
Q Consensus 419 ~~~~~~~~~~a~~l~~~~~~ 438 (464)
|+ +|+++++++++.+++
T Consensus 154 ~~---~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 154 DP---SYKENVMKLSRIQHD 170 (170)
T ss_dssp CH---HHHHHHHHHC-----
T ss_pred CH---HHHHHHHHHHHHhhC
Confidence 97 899999999998873
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=9.2e-21 Score=183.52 Aligned_cols=312 Identities=14% Similarity=0.061 Sum_probs=191.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccc--cccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY--KSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|||++++.+..||..+++.|+++|.++||+|++++..... +.+. ..|+.++.++..... . ......+..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~----~~g~~~~~~~~~~~~----~-~~~~~~~~~ 77 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP----KHGIEIDFIRISGLR----G-KGIKALIAA 77 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGG----GGTCEEEECCCCCCT----T-CCHHHHHTC
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcc----ccCCceEEecCCccC----c-CccHHHHHH
Confidence 7999998877799999999999999999999999986532 2233 347777777632111 1 111111111
Q ss_pred HHH--hCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCc
Q 012412 92 FWQ--IGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNE 167 (464)
Q Consensus 92 ~~~--~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 167 (464)
... .....+..++++. +| |+|+++... ..+..+++..|+|+++.....
T Consensus 78 ~~~~~~~~~~l~~~l~~~----~p-Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~----------------------- 129 (364)
T 1f0k_A 78 PLRIFNAWRQARAIMKAY----KP-DVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG----------------------- 129 (364)
T ss_dssp HHHHHHHHHHHHHHHHHH----CC-SEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-----------------------
T ss_pred HHHHHHHHHHHHHHHHhc----CC-CEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-----------------------
Confidence 100 0111233333332 45 999998543 346678889999988643221
Q ss_pred eeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCcccc
Q 012412 168 ILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYLD 247 (464)
Q Consensus 168 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~~ 247 (464)
++ .....++ ....+.+++.+... + ++...||.-+....
T Consensus 130 --~~--------------------~~~~~~~-------~~~~d~v~~~~~~~--------~---~~~~~i~n~v~~~~-- 167 (364)
T 1f0k_A 130 --IA--------------------GLTNKWL-------AKIATKVMQAFPGA--------F---PNAEVVGNPVRTDV-- 167 (364)
T ss_dssp --SC--------------------CHHHHHH-------TTTCSEEEESSTTS--------S---SSCEECCCCCCHHH--
T ss_pred --CC--------------------cHHHHHH-------HHhCCEEEecChhh--------c---CCceEeCCccchhh--
Confidence 00 0011111 13455666654321 1 13444443221100
Q ss_pred ccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChh
Q 012412 248 KQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKK 325 (464)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~ 325 (464)
+.+. . ..+.+...+++++|++..|+.. ..+....++++++.+ +.++++.+|....+.+.+.
T Consensus 168 -------------~~~~-~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~ 230 (364)
T 1f0k_A 168 -------------LALP-L-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQA 230 (364)
T ss_dssp -------------HTSC-C-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHH
T ss_pred -------------cccc-h-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHH
Confidence 0000 1 1112222234567888888875 345555566666554 4566666665432212111
Q ss_pred hhhhccCCCcEEEEeccCh-HHhhccccccceeccCChhHHHHHHHhCCcEeccCCc---cchhhHHHHHHhHhcceeec
Q 012412 326 FSDETLTSHKSLVVSWCPQ-LEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQW---SDQSTNAKYILDVWKTGLKF 401 (464)
Q Consensus 326 ~~~~~~~~~nv~~~~~~p~-~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~rl~~~~G~g~~l 401 (464)
. +.+ ..+||.+.+|+++ ..++..+|+ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..+
T Consensus 231 ~-~~~-~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~ 305 (364)
T 1f0k_A 231 Y-AEA-GQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKII 305 (364)
T ss_dssp H-HHT-TCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEEC
T ss_pred H-hhc-CCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEe
Confidence 1 111 1258999999954 599999999 99999999999999999999999987 7999999999999 999988
Q ss_pred c--CcCHHHHHHHHHHHhcCCchHHHHHHHHH
Q 012412 402 P--IVKRDAIADCISEILEGERGKELRRNAGK 431 (464)
Q Consensus 402 ~--~~~~~~l~~~i~~ll~~~~~~~~~~~a~~ 431 (464)
+ +++.++|.++|.++ |+ +.+++..+
T Consensus 306 ~~~d~~~~~la~~i~~l--~~---~~~~~~~~ 332 (364)
T 1f0k_A 306 EQPQLSVDAVANTLAGW--SR---ETLLTMAE 332 (364)
T ss_dssp CGGGCCHHHHHHHHHTC--CH---HHHHHHHH
T ss_pred ccccCCHHHHHHHHHhc--CH---HHHHHHHH
Confidence 8 56799999999999 64 44444333
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.76 E-value=3.4e-17 Score=150.53 Aligned_cols=117 Identities=12% Similarity=0.090 Sum_probs=91.9
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH-Hhhccccccc
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL-EVLAHEATGC 355 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~ 355 (464)
+.+.|+|++|.... ......+++++.+.. ++.++++... ...+++.+......|+.+.+|++++ +++..+|+
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~--~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl-- 228 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN--PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK-- 228 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC--TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc--hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--
Confidence 45689999997642 235667778877654 5666666542 2334443322133599999999988 89999999
Q ss_pred eeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc
Q 012412 356 FVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 356 vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~ 402 (464)
+|++|| +|++|+++.|+|++++|...+|..||+.+++. |++..+.
T Consensus 229 vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~ 273 (282)
T 3hbm_A 229 LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYK 273 (282)
T ss_dssp EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECG
T ss_pred EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcc
Confidence 999999 89999999999999999999999999999999 9999886
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.67 E-value=1.6e-16 Score=139.97 Aligned_cols=133 Identities=11% Similarity=0.146 Sum_probs=99.8
Q ss_pred CCCceEEEEecccccCCHHHHHHH-----HHHHhhCC-CeEEEEEcCcccCcCChhhhhhc-------------------
Q 012412 276 AKESVVYVSYGSFVELKAEEMEEL-----AWGLKSSD-QHFLWVVRESEQAKLPKKFSDET------------------- 330 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~------------------- 330 (464)
+++++|||+.||... -.+.+..+ +++|.+.+ .++++++|........ .+.+..
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~-~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFE-HLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCC-SHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHH-HHHHhhhcccccccccccccccccc
Confidence 467899999999742 24444444 47888777 7899999876431111 110000
Q ss_pred -------cCCCcEEEEeccChH-Hhhc-cccccceeccCChhHHHHHHHhCCcEeccCCc----cchhhHHHHHHhHhcc
Q 012412 331 -------LTSHKSLVVSWCPQL-EVLA-HEATGCFVTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNAKYILDVWKT 397 (464)
Q Consensus 331 -------~~~~nv~~~~~~p~~-~ll~-~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~rl~~~~G~ 397 (464)
...-++.+.+|+++. ++|+ .+|+ ||||||.||++|++++|+|+|++|.. .||..||+++++. |+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CC
Confidence 001245566888877 8999 9999 99999999999999999999999974 4799999999999 99
Q ss_pred eeeccCcCHHHHHHHHHHH
Q 012412 398 GLKFPIVKRDAIADCISEI 416 (464)
Q Consensus 398 g~~l~~~~~~~l~~~i~~l 416 (464)
++.+ +++.|.++|.++
T Consensus 181 ~~~~---~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC---APTETGLIAGLR 196 (224)
T ss_dssp CCEE---CSCTTTHHHHHH
T ss_pred EEEc---CHHHHHHHHHHH
Confidence 9876 678888888887
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.66 E-value=5.8e-14 Score=139.12 Aligned_cols=384 Identities=13% Similarity=0.083 Sum_probs=197.1
Q ss_pred CCCCCCCcEEEEEcC-----------CCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCC
Q 012412 7 KPTSCKLAHCLVLTY-----------PGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYD 75 (464)
Q Consensus 7 ~~~~~~~~~il~~~~-----------~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 75 (464)
.+..+++|||++++. ...|+-..+..|++.|.++||+|++++...............++.++.++....
T Consensus 14 ~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 14 LVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPY 93 (438)
T ss_dssp -----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCS
T ss_pred cccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCc
Confidence 345567899999885 235778899999999999999999999754321100000135677777763221
Q ss_pred CCCCCCccCHHHHHHHHHHhCcHHHHHHHHH-hcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHh
Q 012412 76 EGGYAQAESIEAYLERFWQIGPQTLTELVEK-MNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYY 152 (464)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 152 (464)
. ... .......+..+. ..+++. +....+ +|+|++.... ..+..+++..++|+|..........
T Consensus 94 ~-~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~-~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~---- 159 (438)
T 3c48_A 94 E-GLS-KEELPTQLAAFT-------GGMLSFTRREKVT-YDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK---- 159 (438)
T ss_dssp S-SCC-GGGGGGGHHHHH-------HHHHHHHHHHTCC-CSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH----
T ss_pred c-ccc-hhHHHHHHHHHH-------HHHHHHHHhccCC-CCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc----
Confidence 1 111 111111111111 112222 111113 5999987543 2345567889999987655542211
Q ss_pred hhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHh-c
Q 012412 153 HVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRK-T 231 (464)
Q Consensus 153 ~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~-~ 231 (464)
...+ .... .. .......+. ...+..++.+++.|....+. ....+.- .
T Consensus 160 -----------------~~~~---~~~~---~~-----~~~~~~~~~---~~~~~~~d~ii~~s~~~~~~-~~~~~g~~~ 207 (438)
T 3c48_A 160 -----------------NSYR---DDSD---TP-----ESEARRICE---QQLVDNADVLAVNTQEEMQD-LMHHYDADP 207 (438)
T ss_dssp -----------------SCC-------C---CH-----HHHHHHHHH---HHHHHHCSEEEESSHHHHHH-HHHHHCCCG
T ss_pred -----------------cccc---cccC---Cc-----chHHHHHHH---HHHHhcCCEEEEcCHHHHHH-HHHHhCCCh
Confidence 0000 0000 00 000111111 12235678888888664443 2121210 0
Q ss_pred CCeeeecccCCCccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHH-hhC---
Q 012412 232 WSLRTIGPTIPSFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGL-KSS--- 306 (464)
Q Consensus 232 ~~~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al-~~~--- 306 (464)
.++..|..-+.... .... .....+...+.++. +.+..+++..|+... -..+.+-..+..+ ++.
T Consensus 208 ~k~~vi~ngvd~~~----~~~~-------~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~ 275 (438)
T 3c48_A 208 DRISVVSPGADVEL----YSPG-------NDRATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDR 275 (438)
T ss_dssp GGEEECCCCCCTTT----SCCC-----------CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTC
T ss_pred hheEEecCCccccc----cCCc-------ccchhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCc
Confidence 12333332221100 0000 00001123333332 234467788888762 2333333333333 222
Q ss_pred CCeEEEEEcCcc-cCcCChh---hhhhccCCCcEEEEeccChH---Hhhccccccceecc----CChhHHHHHHHhCCcE
Q 012412 307 DQHFLWVVRESE-QAKLPKK---FSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVTH----CGWNSTMEALSLGVPM 375 (464)
Q Consensus 307 ~~~~i~~~~~~~-~~~~~~~---~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~H----gG~~s~~eal~~GvP~ 375 (464)
+.+++++ |... .....+. +.+.+...+||.+.+|+|+. .++..+|+ +|.- |...++.||+++|+|+
T Consensus 276 ~~~l~i~-G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~Pv 352 (438)
T 3c48_A 276 NLRVIIC-GGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPV 352 (438)
T ss_dssp SEEEEEE-CCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCE
T ss_pred ceEEEEE-eCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCE
Confidence 3344443 3310 0111222 22232256899999999864 78999999 7743 3346899999999999
Q ss_pred eccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 012412 376 VAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER-GKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFV 454 (464)
Q Consensus 376 v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~ 454 (464)
|+.+ .......+++. +.|..++..+.+++.++|.++++|++ .+++.+++++..+.+. . ....+.+.+++
T Consensus 353 I~~~----~~~~~e~i~~~-~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s-~----~~~~~~~~~~~ 422 (438)
T 3c48_A 353 IAAR----VGGLPIAVAEG-ETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFS-W----AATAAQLSSLY 422 (438)
T ss_dssp EEES----CTTHHHHSCBT-TTEEEESSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-H----HHHHHHHHHHH
T ss_pred EecC----CCChhHHhhCC-CcEEECCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC-H----HHHHHHHHHHH
Confidence 9865 45566677777 78888876789999999999999863 2345555555554422 1 22355666677
Q ss_pred HHHHhhc
Q 012412 455 ASLACSK 461 (464)
Q Consensus 455 ~~l~~~~ 461 (464)
+.+...+
T Consensus 423 ~~~~~~~ 429 (438)
T 3c48_A 423 NDAIANE 429 (438)
T ss_dssp HHHHHTC
T ss_pred HHHhhhc
Confidence 7766653
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.57 E-value=1.5e-12 Score=128.65 Aligned_cols=368 Identities=13% Similarity=0.069 Sum_probs=186.7
Q ss_pred CCcEEEEEcCC-----CccChHHHHHHHHHHHhCCCeEEEEeCcccccccc---------------c-CCCCCCceEEEc
Q 012412 12 KLAHCLVLTYP-----GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH---------------R-DSSSSSIPLEAI 70 (464)
Q Consensus 12 ~~~~il~~~~~-----~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~---------------~-~~~~~~~~~~~i 70 (464)
++|||++++.. ..|--..+..|++.|+++||+|+++++......-. . .....|+.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 36899987733 34555678999999999999999999643222100 0 001457777777
Q ss_pred cCCCCCCCCCCccCHHHH-HHHHHHhCcHHHHHHHHHhcC-CCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHH
Q 012412 71 SDGYDEGGYAQAESIEAY-LERFWQIGPQTLTELVEKMNG-SDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCA 146 (464)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~l~~-~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~ 146 (464)
+...-. ........... ...+.. ....+..+++.+.. ..+ +|+|++.... ..+..+++..++|+|........
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLD-SEDVYGPGWDGLIRKAVT-FGRASVLLLNDLLREEPL-PDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGG-CSSTTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTSCC-CSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhcc-ccccccCCcchhhhhhHH-HHHHHHHHHHHHhccCCC-CeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 641111 00011101111 222221 11233445555522 224 5999997544 33566678899999886554410
Q ss_pred HHHHHhhhhcCcccCCCCCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHH
Q 012412 147 VDYIYYHVKKGSLELPLTGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVE 226 (464)
Q Consensus 147 ~~~~~~~~~~~~~~~p~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~ 226 (464)
.. ++.. ....... .... ......+..... ..++.+++.|....+. ...
T Consensus 158 ~~---------------------~~~~-~~~~~~~-~~~~-~~~~~~~~~~~~-------~~ad~ii~~S~~~~~~-~~~ 205 (439)
T 3fro_A 158 SK---------------------LPAF-YFHEAGL-SELA-PYPDIDPEHTGG-------YIADIVTTVSRGYLID-EWG 205 (439)
T ss_dssp CC---------------------EEHH-HHHHTTC-GGGC-CSSEECHHHHHH-------HHCSEEEESCHHHHHH-THH
T ss_pred cc---------------------CchH-HhCcccc-cccc-ccceeeHhhhhh-------hhccEEEecCHHHHHH-Hhh
Confidence 00 0000 0000000 0000 000011223222 4567888888654443 112
Q ss_pred HHHh-cCCeeeecccCCCccc-cccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccc-c-CCHHHHHHHHHH
Q 012412 227 WLRK-TWSLRTIGPTIPSFYL-DKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFV-E-LKAEEMEELAWG 302 (464)
Q Consensus 227 ~~~~-~~~~~~vgp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~-~~~~~~~~~~~a 302 (464)
.+.. ..++..|..-+....+ +...+.. .......+.+.++. +++ .+++..|+.. . -..+.+-..+..
T Consensus 206 ~~~~~~~~i~vi~ngvd~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~ 276 (439)
T 3fro_A 206 FFRNFEGKITYVFNGIDCSFWNESYLTGS-------RDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEI 276 (439)
T ss_dssp HHGGGTTSEEECCCCCCTTTSCGGGSCSC-------HHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHH
T ss_pred hhhhcCCceeecCCCCCchhcCcccccch-------hhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHH
Confidence 1111 1134333321111000 0000000 00012333344443 234 7888889876 3 244555444444
Q ss_pred Hhh----CCCeEEEEEcCccc-CcCChhhhhhccCCCcEEEEeccChH---Hhhccccccceecc----CChhHHHHHHH
Q 012412 303 LKS----SDQHFLWVVRESEQ-AKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFVTH----CGWNSTMEALS 370 (464)
Q Consensus 303 l~~----~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI~H----gG~~s~~eal~ 370 (464)
+.+ .+.+++++..+... ...-.++.+. .++++.+.+|+|+. .++..+|+ +|.- |-..++.||++
T Consensus 277 l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~--~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma 352 (439)
T 3fro_A 277 LSSKKEFQEMRFIIIGKGDPELEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMC 352 (439)
T ss_dssp HHTSGGGGGEEEEEECCCCHHHHHHHHHHHHH--CTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHH
T ss_pred HHhcccCCCeEEEEEcCCChhHHHHHHHHHhh--cCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHH
Confidence 544 24455444322211 0111122222 34566677899986 67899999 7632 33478999999
Q ss_pred hCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc-CCc-hHHHHHHHHHHH
Q 012412 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE-GER-GKELRRNAGKWR 433 (464)
Q Consensus 371 ~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~l~ 433 (464)
+|+|+|+... ..... +.+. |.|..++..+.+++.++|.++++ |++ .+.+.+++++..
T Consensus 353 ~G~Pvi~s~~----~~~~e-~~~~-~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 353 LGAIPIASAV----GGLRD-IITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRA 411 (439)
T ss_dssp TTCEEEEESS----THHHH-HCCT-TTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred CCCCeEEcCC----CCcce-eEEc-CceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9999998653 34444 3346 77888877789999999999998 653 244555555544
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.54 E-value=1.2e-12 Score=127.60 Aligned_cols=314 Identities=13% Similarity=0.062 Sum_probs=173.6
Q ss_pred CCcEEEEEcC--C--CccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHH
Q 012412 12 KLAHCLVLTY--P--GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEA 87 (464)
Q Consensus 12 ~~~~il~~~~--~--~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 87 (464)
++|||++++. + ..|.-..+..+++.| +||+|++++...............++.+..++..... . .. .
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~-~ 73 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVML---P---TP-T 73 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCC---S---CH-H
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccc---c---ch-h
Confidence 4689998764 2 457888899999999 7999999998765431110012456788877743211 1 11 0
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEE-ecchHHHHHHHhhhhcCcccCCCC
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPF-LTQSCAVDYIYYHVKKGSLELPLT 164 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~-~~~~~~~~~~~~~~~~~~~~~p~~ 164 (464)
....+..++++. + +|+|++.... .....+++.+|+|.+++ ........
T Consensus 74 --------~~~~l~~~~~~~----~-~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---------------- 124 (394)
T 3okp_A 74 --------TAHAMAEIIRER----E-IDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---------------- 124 (394)
T ss_dssp --------HHHHHHHHHHHT----T-CSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH----------------
T ss_pred --------hHHHHHHHHHhc----C-CCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh----------------
Confidence 011233344432 3 5999986443 33455688899995543 33221100
Q ss_pred CCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCc
Q 012412 165 GNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSF 244 (464)
Q Consensus 165 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~ 244 (464)
.. ......+. +. ....++.+++.|....+. .........++..|.+-+...
T Consensus 125 ------------------------~~-~~~~~~~~-~~--~~~~~d~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~~~ 175 (394)
T 3okp_A 125 ------------------------SM-LPGSRQSL-RK--IGTEVDVLTYISQYTLRR-FKSAFGSHPTFEHLPSGVDVK 175 (394)
T ss_dssp ------------------------TT-SHHHHHHH-HH--HHHHCSEEEESCHHHHHH-HHHHHCSSSEEEECCCCBCTT
T ss_pred ------------------------hh-cchhhHHH-HH--HHHhCCEEEEcCHHHHHH-HHHhcCCCCCeEEecCCcCHH
Confidence 00 11122222 11 235677888888664443 222221111233333221110
Q ss_pred cccccccCccccccccccc----chhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhh--CCCeEEEEEcCc
Q 012412 245 YLDKQIEDDKDYGFSMFKS----STEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS--SDQHFLWVVRES 317 (464)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~ 317 (464)
.+.+ ....+.+.++. +++..+++..|+... -..+.+-..+..+.+ .+.+++++..+.
T Consensus 176 ---------------~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~ 239 (394)
T 3okp_A 176 ---------------RFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR 239 (394)
T ss_dssp ---------------TSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT
T ss_pred ---------------HcCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch
Confidence 0111 12333344443 234467888888752 233333333333322 245665554332
Q ss_pred ccCcCChhhhhhc-cCCCcEEEEeccChH---Hhhccccccceec-----------cCChhHHHHHHHhCCcEeccCCcc
Q 012412 318 EQAKLPKKFSDET-LTSHKSLVVSWCPQL---EVLAHEATGCFVT-----------HCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 318 ~~~~~~~~~~~~~-~~~~nv~~~~~~p~~---~ll~~~~~~~vI~-----------HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
. .+.+.+.. ...++|.+.+|+|+. .++..+|+ +|. -|...++.||+++|+|+|+.+..+
T Consensus 240 ~----~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~ 313 (394)
T 3okp_A 240 Y----ESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG 313 (394)
T ss_dssp T----HHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT
T ss_pred H----HHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC
Confidence 1 12222110 145899999999866 68899999 775 455678999999999999977532
Q ss_pred chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 383 DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 383 DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
... +... |.|...+..+.+++.++|.++++|+
T Consensus 314 ----~~e-~i~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 314 ----APE-TVTP-ATGLVVEGSDVDKLSELLIELLDDP 345 (394)
T ss_dssp ----GGG-GCCT-TTEEECCTTCHHHHHHHHHHHHTCH
T ss_pred ----hHH-HHhc-CCceEeCCCCHHHHHHHHHHHHhCH
Confidence 222 2234 5677776668999999999999986
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.54 E-value=5e-13 Score=130.80 Aligned_cols=314 Identities=12% Similarity=0.043 Sum_probs=166.9
Q ss_pred CCCCcEEEEEcCC---C-ccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCH
Q 012412 10 SCKLAHCLVLTYP---G-QGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESI 85 (464)
Q Consensus 10 ~~~~~~il~~~~~---~-~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 85 (464)
..++|||++++.. . .|.-..+..+++.|.++||+|++++...............+ .+..++.....
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------- 86 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGSV--------- 86 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC-----------------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEeccccCCc---------
Confidence 3457999987642 2 56668899999999999999999998654331110000011 22222210000
Q ss_pred HHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch--hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCC
Q 012412 86 EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL--LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPL 163 (464)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (464)
... .+.......+..++++. + +|+|++.... ..+..+++..++|++......
T Consensus 87 ~~~--~~~~~~~~~l~~~l~~~----~-~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~------------------- 140 (406)
T 2gek_A 87 ARL--RFGPATHRKVKKWIAEG----D-FDVLHIHEPNAPSLSMLALQAAEGPIVATFHTS------------------- 140 (406)
T ss_dssp ------CCHHHHHHHHHHHHHH----C-CSEEEEECCCSSSHHHHHHHHEESSEEEEECCC-------------------
T ss_pred ccc--cccHHHHHHHHHHHHhc----C-CCEEEECCccchHHHHHHHHhcCCCEEEEEcCc-------------------
Confidence 000 00000012233444432 3 4999986544 335667788899988754432
Q ss_pred CCCceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHh-hhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCC
Q 012412 164 TGNEILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQF-ENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIP 242 (464)
Q Consensus 164 ~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~ 242 (464)
.+. ......+. +.. ......+.+++.|....+. ....++. .++ .|.+-+.
T Consensus 141 ------~~~-------------------~~~~~~~~-~~~~~~~~~~d~ii~~s~~~~~~-~~~~~~~-~~~-vi~~~v~ 191 (406)
T 2gek_A 141 ------TTK-------------------SLTLSVFQ-GILRPYHEKIIGRIAVSDLARRW-QMEALGS-DAV-EIPNGVD 191 (406)
T ss_dssp ------CCS-------------------HHHHHHHH-STTHHHHTTCSEEEESSHHHHHH-HHHHHSS-CEE-ECCCCBC
T ss_pred ------chh-------------------hhhHHHHH-HHHHHHHhhCCEEEECCHHHHHH-HHHhcCC-CcE-EecCCCC
Confidence 000 00111111 111 3346778888888654433 1122211 122 2221111
Q ss_pred CccccccccCcccccccccccchhHHHHHhhcCCCCceEEEEeccc-c-cCCHHHHHHHHHHHhh--CCCeEEEEEcCcc
Q 012412 243 SFYLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSF-V-ELKAEEMEELAWGLKS--SDQHFLWVVRESE 318 (464)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~-~-~~~~~~~~~~~~al~~--~~~~~i~~~~~~~ 318 (464)
... +.+... -... +....+++..|+. . .-..+.+-..+..+.+ .+.+++++..+..
T Consensus 192 ~~~---------------~~~~~~----~~~~-~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~ 251 (406)
T 2gek_A 192 VAS---------------FADAPL----LDGY-PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE 251 (406)
T ss_dssp HHH---------------HHTCCC----CTTC-SCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH
T ss_pred hhh---------------cCCCch----hhhc-cCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH
Confidence 000 000000 0000 1123577888887 4 2233333333333332 2455554433221
Q ss_pred cCcCChhhhhhcc-CCCcEEEEeccChH---Hhhccccccceec----cCCh-hHHHHHHHhCCcEeccCCccchhhHHH
Q 012412 319 QAKLPKKFSDETL-TSHKSLVVSWCPQL---EVLAHEATGCFVT----HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAK 389 (464)
Q Consensus 319 ~~~~~~~~~~~~~-~~~nv~~~~~~p~~---~ll~~~~~~~vI~----HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~ 389 (464)
+.+.+... ..+||.+.+++++. .++..+++ +|. +.|+ .++.||+++|+|+|+.+. .....
T Consensus 252 -----~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e 320 (406)
T 2gek_A 252 -----DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRR 320 (406)
T ss_dssp -----HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHH
T ss_pred -----HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHH
Confidence 33332211 25789999999975 88999999 663 3444 489999999999998764 56777
Q ss_pred HHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 390 YILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 390 rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
.+.+. +.|...+..+.+++.++|.++++|+
T Consensus 321 ~i~~~-~~g~~~~~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 321 VLADG-DAGRLVPVDDADGMAAALIGILEDD 350 (406)
T ss_dssp HHTTT-TSSEECCTTCHHHHHHHHHHHHHCH
T ss_pred HhcCC-CceEEeCCCCHHHHHHHHHHHHcCH
Confidence 77777 7888887668999999999999986
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.49 E-value=8.7e-13 Score=127.90 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=86.7
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh----C-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh---HHhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS----S-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~---~~ll 348 (464)
++++|+++.|...... .+..++++++. . +.++++..+.+. .+.+.+.+.....++|.+.+++++ ..++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--VVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--HHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 3557888888653221 23444555433 2 456655545321 112223222112368999966554 4899
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+.+|+ ||+.+| |.+.||+++|+|+|+.+...++.. +.+. |.|+.++ .++++|.+++.++++|+
T Consensus 273 ~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 273 RASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG-TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC-SCHHHHHHHHHHHHTCH
T ss_pred HhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC-CCHHHHHHHHHHHHhCh
Confidence 99999 998873 556699999999999876665554 3567 8888775 48999999999999986
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.47 E-value=9.8e-12 Score=125.30 Aligned_cols=133 Identities=16% Similarity=0.118 Sum_probs=88.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCC-----CeEEEEEcCcccC-----cC-------Chhh---hhhccCCCcEEE
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSSD-----QHFLWVVRESEQA-----KL-------PKKF---SDETLTSHKSLV 338 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~-----~~-------~~~~---~~~~~~~~nv~~ 338 (464)
..+++..|+.. +.+-...++++++.+. ...++.+|+.... .+ .+++ .+.+.+.++|.+
T Consensus 262 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 262 LPAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp SCEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred CcEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 35677888875 3344555666665542 2234455541100 01 1122 222225689999
Q ss_pred EeccChH---Hhhccc----cccceecc---CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHH
Q 012412 339 VSWCPQL---EVLAHE----ATGCFVTH---CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRD 407 (464)
Q Consensus 339 ~~~~p~~---~ll~~~----~~~~vI~H---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~ 407 (464)
.+++|+. .++..+ |+ +|.- -| ..++.||+++|+|+|+.. .......+.+. +.|..++..+.+
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~~d~~ 412 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDPEDPE 412 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECTTCHH
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCCCCHH
Confidence 9999865 788899 98 7732 23 468899999999999865 34566666666 688888767899
Q ss_pred HHHHHHHHHhcCC
Q 012412 408 AIADCISEILEGE 420 (464)
Q Consensus 408 ~l~~~i~~ll~~~ 420 (464)
+++++|.++++|+
T Consensus 413 ~la~~i~~ll~~~ 425 (499)
T 2r60_A 413 DIARGLLKAFESE 425 (499)
T ss_dssp HHHHHHHHHHSCH
T ss_pred HHHHHHHHHHhCH
Confidence 9999999999986
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.46 E-value=1.1e-12 Score=128.02 Aligned_cols=132 Identities=11% Similarity=0.147 Sum_probs=85.9
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh-----CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh---HHhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS-----SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~---~~ll 348 (464)
+++.++++.|...... +.+..++++++. .+.++++..+.+. .+.+.+.+.+...+|+++.+++++ ..++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~ 299 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNP--AVREKAMAILGGHERIHLIEPLDAIDFHNFL 299 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCH--HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHH
Confidence 4567778766432111 123445554432 2456766655321 111222221113479999999874 3889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+.+++ +|+-.|..+ .||+++|+|+|++|...++.. +.+. |.|+.+.. ++++|.+++.++|+|+
T Consensus 300 ~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~-d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 300 RKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT-NKENLIKEALDLLDNK 362 (403)
T ss_dssp HHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC-CHHHHHHHHHHHHcCH
Confidence 99999 998875333 799999999999975555543 3478 88877654 8999999999999986
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.45 E-value=4.7e-13 Score=130.50 Aligned_cols=132 Identities=14% Similarity=0.179 Sum_probs=86.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh---HHhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~---~~ll 348 (464)
++++|+++.+...... +.+..++++++.+ +.++++.++.+. ...+.+.+.+...+|+.+.+++++ ..++
T Consensus 229 ~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~--~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 229 SKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQILYPVHLNP--NVREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp TSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEEEEeCCCh--HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 4567777763322221 1245566665432 456666555321 112222222113479999888754 3889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+.+++ ||+-.| |...||+++|+|+|+.....+.. .+.+. |.++.+.. ++++|.+++.++++|+
T Consensus 306 ~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 306 DRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVGT-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECTT-CHHHHHHHHHHHHHCH
T ss_pred HhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcCC-CHHHHHHHHHHHHcCH
Confidence 99999 999887 66689999999999975444442 25677 87766543 7999999999999986
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.43 E-value=4e-12 Score=123.53 Aligned_cols=132 Identities=15% Similarity=0.199 Sum_probs=88.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh----C-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh---HHhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKS----S-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ---LEVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~---~~ll 348 (464)
+++.++++.|+..... +.+..++++++. . +.++++..+... ...+.+.+.+...+||.+.+++++ ..++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--NVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--HHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 4567888888765321 334455555433 2 455555434221 122223222113368999877764 3889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..+|+ +|+.+| +++.||+++|+|+|+.+..... ..+.+. |.|..++. ++++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 281 NHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVGT-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEECS-SHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeCC-CHHHHHHHHHHHHhCh
Confidence 99999 998875 4488999999999999864333 235677 88888865 8999999999999986
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.42 E-value=1.6e-11 Score=118.71 Aligned_cols=141 Identities=14% Similarity=0.187 Sum_probs=96.3
Q ss_pred HHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCC------CeEEEEEcCcccCcCChhhhhhccCCCcEEEEec
Q 012412 268 CMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSD------QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW 341 (464)
Q Consensus 268 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ 341 (464)
+.+.++. ++++.+++..|+.. +.+....++++++.+. .+++ .+|.+....+ .++.+.+...+||.+.++
T Consensus 186 ~~~~~~~-~~~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~-i~G~g~~~~~-~~~~~~~~~~~~v~~~g~ 260 (374)
T 2iw1_A 186 YRQKNGI-KEQQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLF-VVGQDKPRKF-EALAEKLGVRSNVHFFSG 260 (374)
T ss_dssp HHHHTTC-CTTCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEE-EESSSCCHHH-HHHHHHHTCGGGEEEESC
T ss_pred HHHHhCC-CCCCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEE-EEcCCCHHHH-HHHHHHcCCCCcEEECCC
Confidence 3344433 23456788888765 2344555666766553 3333 3443321111 122222224689999998
Q ss_pred cChH-Hhhccccccceec----cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHH
Q 012412 342 CPQL-EVLAHEATGCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISE 415 (464)
Q Consensus 342 ~p~~-~ll~~~~~~~vI~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ 415 (464)
..+. .++..+|+ +|. -|..+++.||+++|+|+|+.+. ..+...+++. +.|..++ ..+.+++.++|.+
T Consensus 261 ~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 261 RNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRK 333 (374)
T ss_dssp CSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHH
T ss_pred cccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHH
Confidence 6654 89999999 775 4566889999999999998764 4567788888 9999997 7799999999999
Q ss_pred HhcCC
Q 012412 416 ILEGE 420 (464)
Q Consensus 416 ll~~~ 420 (464)
+++|+
T Consensus 334 l~~~~ 338 (374)
T 2iw1_A 334 ALTQS 338 (374)
T ss_dssp HHHCH
T ss_pred HHcCh
Confidence 99986
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.40 E-value=1.1e-10 Score=113.64 Aligned_cols=323 Identities=14% Similarity=0.130 Sum_probs=166.3
Q ss_pred CcEEEEEcCCC-ccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 13 LAHCLVLTYPG-QGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 13 ~~~il~~~~~~-~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
.+++....++. .|.-..+..|++.|.++||+|++++....... . ....++.+..++..... ..... . . .+..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~--~~~~~i~~~~~~~~~~~-~~~~~-~-~-~~~~ 87 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-N--KVYPNIYFHEVTVNQYS-VFQYP-P-Y-DLAL 87 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------CCCTTEEEECCCCC-----CCSC-C-H-HHHH
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-c--ccCCceEEEeccccccc-ccccc-c-c-cHHH
Confidence 35677555554 46777888999999999999999998543221 1 12456666665521111 00000 0 0 0110
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchh--hHHHHHH-Hc--CCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL--WALDVAK-KF--GLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~--~~~~~A~-~~--giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
...+..++++. +| |+|++..... ....++. .. ++|++..........
T Consensus 88 -----~~~l~~~l~~~----~~-Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------------------ 139 (394)
T 2jjm_A 88 -----ASKMAEVAQRE----NL-DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV------------------ 139 (394)
T ss_dssp -----HHHHHHHHHHH----TC-SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT------------------
T ss_pred -----HHHHHHHHHHc----CC-CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc------------------
Confidence 11233444442 44 9999974332 2233343 44 499887655431100
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccc
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~ 246 (464)
.+. ......+.+.. +..++.+++.|....+. .........++..|..-+...
T Consensus 140 ----~~~--------------~~~~~~~~~~~-------~~~ad~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~~~-- 191 (394)
T 2jjm_A 140 ----LGS--------------DPSLNNLIRFG-------IEQSDVVTAVSHSLINE-THELVKPNKDIQTVYNFIDER-- 191 (394)
T ss_dssp ----TTT--------------CTTTHHHHHHH-------HHHSSEEEESCHHHHHH-HHHHTCCSSCEEECCCCCCTT--
T ss_pred ----cCC--------------CHHHHHHHHHH-------HhhCCEEEECCHHHHHH-HHHhhCCcccEEEecCCccHH--
Confidence 000 00011122222 25567888888654332 111111111333333221110
Q ss_pred cccccCccccccccccc-chhHHHHHhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhh-CCCeEEEEEcCcccCcCC
Q 012412 247 DKQIEDDKDYGFSMFKS-STEACMKWLNDRAKESVVYVSYGSFVE-LKAEEMEELAWGLKS-SDQHFLWVVRESEQAKLP 323 (464)
Q Consensus 247 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~ 323 (464)
.+.+ ....+.+.++. +++..+++..|+... -..+.+-..+..+.+ .+.+++++..+.....+
T Consensus 192 -------------~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l- 256 (394)
T 2jjm_A 192 -------------VYFKRDMTQLKKEYGI-SESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTI- 256 (394)
T ss_dssp -------------TCCCCCCHHHHHHTTC-C---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHH-
T ss_pred -------------hcCCcchHHHHHHcCC-CCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchHHHHH-
Confidence 0111 12333333332 123456777888762 233333333333322 34555544322211111
Q ss_pred hhhhhhccCCCcEEEEeccChH-Hhhcccccccee----ccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcce
Q 012412 324 KKFSDETLTSHKSLVVSWCPQL-EVLAHEATGCFV----THCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTG 398 (464)
Q Consensus 324 ~~~~~~~~~~~nv~~~~~~p~~-~ll~~~~~~~vI----~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g 398 (464)
.++.+.+...+||.+.++..+. .++..+|+ +| .-|...++.||+++|+|+|+.+.. .....+++. +.|
T Consensus 257 ~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g 329 (394)
T 2jjm_A 257 LQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTG 329 (394)
T ss_dssp HHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTE
T ss_pred HHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-Cce
Confidence 1122222235789888876543 89999999 77 455567899999999999987643 334445556 678
Q ss_pred eeccCcCHHHHHHHHHHHhcCC
Q 012412 399 LKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 399 ~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
...+..+.+++.++|.++++|+
T Consensus 330 ~~~~~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 330 YLCEVGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp EEECTTCHHHHHHHHHHHHHCH
T ss_pred EEeCCCCHHHHHHHHHHHHcCH
Confidence 8877668999999999999986
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.33 E-value=2.2e-10 Score=110.79 Aligned_cols=132 Identities=16% Similarity=0.139 Sum_probs=85.4
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhh
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVL 348 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll 348 (464)
++++++++.|...... +.+..++++++.+ +.++++ +......+.+.+.+.+...+||.+.+++++. .++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 4556777888754221 3455566665432 345443 3221111112222221123799998877754 889
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..+|+ +|+.. .+++.||+++|+|+|+.+..... ..+.+. |.|..++. +.++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~s-g~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 ARSYL--MLTDS-GGVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAGT-DEETIFSLADELLSDK 343 (375)
T ss_dssp HTCSE--EEECC-HHHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECC-CChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcCC-CHHHHHHHHHHHHhCh
Confidence 99999 99876 45689999999999988543332 234567 88887764 8999999999999986
No 37
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.33 E-value=1.9e-11 Score=116.84 Aligned_cols=125 Identities=11% Similarity=0.054 Sum_probs=88.9
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcccccccee
Q 012412 281 VYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATGCFV 357 (464)
Q Consensus 281 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~~vI 357 (464)
+++..|+.. +.+-...++++++.++.+++++-.+.....+ +++.+. ..+||.+.+|+++. .++..+|+ +|
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l-~~~~~~--~~~~v~~~g~~~~~~l~~~~~~adv--~v 236 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWEPEYF-DEITRR--YGSTVEPIGEVGGERRLDLLASAHA--VL 236 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCCHHHH-HHHHHH--HTTTEEECCCCCHHHHHHHHHHCSE--EE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcccHHHH-HHHHHH--hCCCEEEeccCCHHHHHHHHHhCCE--EE
Confidence 566678765 3455566777777667776665433211111 223333 23899999999976 88999999 66
Q ss_pred --cc-----------CC-hhHHHHHHHhCCcEeccCCccchhhHHHHHHh--HhcceeeccCcCHHHHHHHHHHHhc
Q 012412 358 --TH-----------CG-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILD--VWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 358 --~H-----------gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~--~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
+. -| ..++.||+++|+|+|+... ......+++ . +.|...+. +.+++.++|.++++
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF-APDEARRTLAGLPA 307 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC-CHHHHHHHHHTSCC
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC-CHHHHHHHHHHHHH
Confidence 32 34 4678999999999998764 557777877 6 77887777 99999999999987
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.29 E-value=2.5e-10 Score=112.12 Aligned_cols=134 Identities=12% Similarity=0.020 Sum_probs=87.8
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHH-hhC-CCeEEEEEcCccc----CcCChhhhhhccCCCcEEEEeccC---h---
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGL-KSS-DQHFLWVVRESEQ----AKLPKKFSDETLTSHKSLVVSWCP---Q--- 344 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al-~~~-~~~~i~~~~~~~~----~~~~~~~~~~~~~~~nv~~~~~~p---~--- 344 (464)
+..+++..|.... -..+.+-..+..+ ++. +.+++++..+... ...-+++.+.+...++|.+.+|++ +
T Consensus 230 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 230 EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREV 309 (416)
T ss_dssp TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHH
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHH
Confidence 3456777888753 2333333333333 222 5666665544211 001122233333568999999886 2
Q ss_pred HHhhccccccceeccC----ChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 345 LEVLAHEATGCFVTHC----GWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 345 ~~ll~~~~~~~vI~Hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
..++..+|+ +|.-. ...++.||+++|+|+|+.+. ..+...+++. +.|...+ +.+++.++|.++++|+
T Consensus 310 ~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~--d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 310 NAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR--DANEAVEVVLYLLKHP 380 (416)
T ss_dssp HHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES--SHHHHHHHHHHHHHCH
T ss_pred HHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC--CHHHHHHHHHHHHhCH
Confidence 278899999 77543 45688999999999998663 5677777777 7888886 8999999999999986
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.16 E-value=1.1e-10 Score=112.87 Aligned_cols=318 Identities=14% Similarity=0.116 Sum_probs=169.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc-ccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK-SLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
-++|++++ .|++-.+.-+.+|.++|.++ +++.++.+....+ .+... -..++.+. -|+ +.- +.. ..+....+.
T Consensus 8 ~~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~-~~~~~~i~-~~~-~~l-~~~-~~~~~~~~~ 80 (385)
T 4hwg_A 8 HMLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQV-FFDDMGIR-KPD-YFL-EVA-ADNTAKSIG 80 (385)
T ss_dssp CCCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHH-HHC-CCCC-CCS-EEC-CCC-CCCSHHHHH
T ss_pred hhhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHH-HHhhCCCC-CCc-eec-CCC-CCCHHHHHH
Confidence 35677665 46677788888888889877 9988888877654 22200 01222221 111 110 111 123333322
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEe--CCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVY--DSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~--D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
... ..+.+++++. +| |+|++ |..+.++..+|..+|||++.+...
T Consensus 81 ~~~----~~l~~~l~~~----kP-D~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------------------- 126 (385)
T 4hwg_A 81 LVI----EKVDEVLEKE----KP-DAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------------------- 126 (385)
T ss_dssp HHH----HHHHHHHHHH----CC-SEEEEESCSGGGGGHHHHHHTTCCEEEESCC-------------------------
T ss_pred HHH----HHHHHHHHhc----CC-cEEEEECCchHHHHHHHHHHhCCCEEEEeCC-------------------------
Confidence 222 2344555554 56 99987 334444488999999997654221
Q ss_pred eCCCCCCCCCCCCCCccccCCCCc-hHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhc-C--CeeeecccCCCc
Q 012412 169 LLPGMPPLEPQDMPSFIHDLGSYP-AVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKT-W--SLRTIGPTIPSF 244 (464)
Q Consensus 169 ~~p~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~-~--~~~~vgp~~~~~ 244 (464)
+.... ...+ ...+.+. . .-++..++.+....+. +...- . ++..+|....+.
T Consensus 127 ----lrs~~-----------~~~pee~nR~~~----~--~~a~~~~~~te~~~~~----l~~~G~~~~~I~vtGnp~~D~ 181 (385)
T 4hwg_A 127 ----NRCFD-----------QRVPEEINRKII----D--HISDVNITLTEHARRY----LIAEGLPAELTFKSGSHMPEV 181 (385)
T ss_dssp ----CCCSC-----------TTSTHHHHHHHH----H--HHCSEEEESSHHHHHH----HHHTTCCGGGEEECCCSHHHH
T ss_pred ----Ccccc-----------ccCcHHHHHHHH----H--hhhceeecCCHHHHHH----HHHcCCCcCcEEEECCchHHH
Confidence 10000 0011 1222222 1 2234566666432221 11111 1 366777321110
Q ss_pred cccccccCcccccccccccchhHHHHHhhcCCCCceEEEEecccccC-CHHHHHHHHHHHhhC----CCeEEEEEcCccc
Q 012412 245 YLDKQIEDDKDYGFSMFKSSTEACMKWLNDRAKESVVYVSYGSFVEL-KAEEMEELAWGLKSS----DQHFLWVVRESEQ 319 (464)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~----~~~~i~~~~~~~~ 319 (464)
... . ......+++.+.++-. +++.|+++.|...+. ..+.+..++++++++ +.++++..++..
T Consensus 182 ~~~---~--------~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~- 248 (385)
T 4hwg_A 182 LDR---F--------MPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT- 248 (385)
T ss_dssp HHH---H--------HHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH-
T ss_pred HHH---h--------hhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH-
Confidence 000 0 0000012233334432 356888888875432 235566677766543 567777665321
Q ss_pred CcCChhhhhh---ccCCCcEEEEeccCh---HHhhccccccceeccCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh
Q 012412 320 AKLPKKFSDE---TLTSHKSLVVSWCPQ---LEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD 393 (464)
Q Consensus 320 ~~~~~~~~~~---~~~~~nv~~~~~~p~---~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~ 393 (464)
.+.+.+. ....+|+++.+.+++ ..+++.+++ +|+-.|. ...||.++|+|+|+++...+-+. +.+
T Consensus 249 ---~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~ 318 (385)
T 4hwg_A 249 ---KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMD 318 (385)
T ss_dssp ---HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHH
T ss_pred ---HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhh
Confidence 1111111 112468998766654 489999999 9998776 46999999999999986543121 356
Q ss_pred HhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 394 VWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 394 ~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
. |.++.+. .+.++|.+++.++|+|+
T Consensus 319 ~-G~~~lv~-~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 319 A-GTLIMSG-FKAERVLQAVKTITEEH 343 (385)
T ss_dssp H-TCCEECC-SSHHHHHHHHHHHHTTC
T ss_pred c-CceEEcC-CCHHHHHHHHHHHHhCh
Confidence 7 8776654 47999999999999886
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.11 E-value=2.9e-09 Score=111.53 Aligned_cols=134 Identities=15% Similarity=0.157 Sum_probs=85.4
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhC-----CCeEEEEEcCcccCc-------CC---hhhhhhccCCCcEEEEec-
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSS-----DQHFLWVVRESEQAK-------LP---KKFSDETLTSHKSLVVSW- 341 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~-------~~---~~~~~~~~~~~nv~~~~~- 341 (464)
+..+++..|.+. +.+-+..+++|++.+ +.+++++.++..... .. .++.+++.+.++|.+.++
T Consensus 571 ~~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 571 KKPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp TSCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CCeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 446788888876 334455556665544 345555544331000 00 112223335689999984
Q ss_pred ---cChHHhhc----cccccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHH
Q 012412 342 ---CPQLEVLA----HEATGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIA 410 (464)
Q Consensus 342 ---~p~~~ll~----~~~~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~ 410 (464)
+|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |.......+++. +.|..++..+.++++
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p~D~e~LA 721 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDPYHGDQAA 721 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECTTSHHHHH
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCCCCHHHHH
Confidence 44454443 5677 7732 3346889999999999985 455667777777 789888867899999
Q ss_pred HHHHHHh----cCC
Q 012412 411 DCISEIL----EGE 420 (464)
Q Consensus 411 ~~i~~ll----~~~ 420 (464)
++|.+++ .|+
T Consensus 722 ~aI~~lL~~Ll~d~ 735 (816)
T 3s28_A 722 DTLADFFTKCKEDP 735 (816)
T ss_dssp HHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhccCH
Confidence 9997776 776
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.09 E-value=2.8e-08 Score=99.51 Aligned_cols=133 Identities=14% Similarity=0.084 Sum_probs=81.0
Q ss_pred ceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcc-cCcCChhhhhhccCCCcEE-EEeccChH--Hhhccccc
Q 012412 279 SVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSL-VVSWCPQL--EVLAHEAT 353 (464)
Q Consensus 279 ~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~-~~~~~p~~--~ll~~~~~ 353 (464)
..+++..|++.. -..+.+-..+..+.+.+.+++++-.+.. ....-.++.+. .++||. +.++.... .++..+|+
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~--~~~~v~~~~g~~~~~~~~~~~~adv 368 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASR--HHGRVGVAIGYNEPLSHLMQAGCDA 368 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHH--TTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHh--CCCcEEEecCCCHHHHHHHHhcCCE
Confidence 347888898762 2333333333334334667666654321 01111122222 347887 67883332 68999999
Q ss_pred cceec----cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHh---------HhcceeeccCcCHHHHHHHHHHHh---
Q 012412 354 GCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILD---------VWKTGLKFPIVKRDAIADCISEIL--- 417 (464)
Q Consensus 354 ~~vI~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~---------~~G~g~~l~~~~~~~l~~~i~~ll--- 417 (464)
+|. -|-..++.||+++|+|+|+... ......+++ . +.|..++..+.++|+++|.+++
T Consensus 369 --~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~-~~G~l~~~~d~~~la~~i~~ll~~~ 441 (485)
T 1rzu_A 369 --IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKA-ATGVQFSPVTLDGLKQAIRRTVRYY 441 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTC-CCBEEESSCSHHHHHHHHHHHHHHH
T ss_pred --EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccC-CcceEeCCCCHHHHHHHHHHHHHHh
Confidence 773 2334689999999999998664 334443322 1 2577777668999999999999
Q ss_pred cCC
Q 012412 418 EGE 420 (464)
Q Consensus 418 ~~~ 420 (464)
+|+
T Consensus 442 ~~~ 444 (485)
T 1rzu_A 442 HDP 444 (485)
T ss_dssp TCH
T ss_pred CCH
Confidence 675
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.03 E-value=3.1e-07 Score=91.85 Aligned_cols=135 Identities=8% Similarity=0.018 Sum_probs=80.9
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcc-cCcCChhhhhhccCCCcEE-EEeccChH--Hhhcccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSL-VVSWCPQL--EVLAHEA 352 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~-~~~~~p~~--~ll~~~~ 352 (464)
+..+++..|.+.. -..+.+-..+..+.+.+.+++++-.+.. ....-.++.+. ..++|. +.++.... .++..+|
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~--~~~~v~~~~g~~~~~~~~~~~~ad 368 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAE--YPGQVGVQIGYHEAFSHRIMGGAD 368 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHH--STTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHh--CCCcEEEeCCCCHHHHHHHHHhCC
Confidence 4467778887752 2333333333333333667666554321 01111122222 347886 77884332 7899999
Q ss_pred ccceecc----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHh--------cceeeccCcCHHHHHHHHHHHh---
Q 012412 353 TGCFVTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVW--------KTGLKFPIVKRDAIADCISEIL--- 417 (464)
Q Consensus 353 ~~~vI~H----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~--------G~g~~l~~~~~~~l~~~i~~ll--- 417 (464)
+ +|.- |...++.||+++|+|+|+... ......+++.. +.|..++..+.++|+++|.+++
T Consensus 369 v--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~ 442 (485)
T 2qzs_A 369 V--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLW 442 (485)
T ss_dssp E--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHH
T ss_pred E--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHc
Confidence 9 7632 334688999999999998753 33444333210 2577777678999999999999
Q ss_pred cCC
Q 012412 418 EGE 420 (464)
Q Consensus 418 ~~~ 420 (464)
.|+
T Consensus 443 ~~~ 445 (485)
T 2qzs_A 443 SRP 445 (485)
T ss_dssp TSH
T ss_pred CCH
Confidence 565
No 43
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.97 E-value=2e-07 Score=91.05 Aligned_cols=114 Identities=13% Similarity=0.067 Sum_probs=78.4
Q ss_pred eEEEEecccccCCHHHHHHHHHHH-hhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhcccccc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGL-KSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEATG 354 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al-~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~~~ 354 (464)
.+++..|++.. .... +.++ +.. +.+++++ |.+. . . .+...+||.+.+++|+. .++..+|+
T Consensus 223 ~~i~~vGrl~~-~Kg~----~~~l~~~~~~~~l~iv-G~g~---~-~----~~~l~~~V~f~G~~~~~~l~~~~~~adv- 287 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEF----FVVASKAFPQVTFHVI-GSGM---G-R----HPGYGDNVIVYGEMKHAQTIGYIKHARF- 287 (406)
T ss_dssp EEEEEECCTTB-CHHH----HHHHHHHCTTEEEEEE-SCSS---C-C----CTTCCTTEEEECCCCHHHHHHHHHTCSE-
T ss_pred cEEEEEecccc-ccCH----HHHHHHhCCCeEEEEE-eCch---H-H----hcCCCCCEEEcCCCCHHHHHHHHHhcCE-
Confidence 67788888863 2222 3333 222 3455444 4322 1 1 11156899999999865 78899999
Q ss_pred ceec---cCCh-hHHHHHH-------HhCCcEeccCCccchhhHHHHHHhHhcceee-ccCcCHHHHHHHHHHHhcCC
Q 012412 355 CFVT---HCGW-NSTMEAL-------SLGVPMVAMPQWSDQSTNAKYILDVWKTGLK-FPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 355 ~vI~---HgG~-~s~~eal-------~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~-l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|. +-|+ .++.||+ ++|+|+|+... +.+. ..|.. ++.-+.++|+++|.++++|+
T Consensus 288 -~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 288 -GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTPGNADSVIAAITQALEAP 353 (406)
T ss_dssp -EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECTTCHHHHHHHHHHHHHCC
T ss_pred -EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCCCCHHHHHHHHHHHHhCc
Confidence 663 3344 5789999 99999998764 5555 66877 67668999999999999887
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.93 E-value=2.4e-07 Score=90.54 Aligned_cols=133 Identities=11% Similarity=0.126 Sum_probs=82.4
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHh----h-CCCeEEEEEcCcccCc--CChhh---hhhccCCCc-------EEEEe
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLK----S-SDQHFLWVVRESEQAK--LPKKF---SDETLTSHK-------SLVVS 340 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~----~-~~~~~i~~~~~~~~~~--~~~~~---~~~~~~~~n-------v~~~~ 340 (464)
+..+++..|+... .+-+..++++++ + .+.+++++..+..... +.+.+ .+...+.++ +.+.+
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 4578888888652 223333333333 2 3567666654432211 00222 122224454 77779
Q ss_pred ccChH---Hhhccccccceec----cCChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcc---------------e
Q 012412 341 WCPQL---EVLAHEATGCFVT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKT---------------G 398 (464)
Q Consensus 341 ~~p~~---~ll~~~~~~~vI~----HgG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~---------------g 398 (464)
|+|+. .++..+|+ +|. -|...++.||+++|+|+|+.. -......+.+. .. |
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGD-CVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCTT-TSEEECCCEEEECTTTCS
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHccC-cccccccccccccccccC
Confidence 99955 78899999 763 233458999999999999855 34555555443 33 6
Q ss_pred e--eccCcCHHHHHHHHHHHhcCC
Q 012412 399 L--KFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 399 ~--~l~~~~~~~l~~~i~~ll~~~ 420 (464)
. .+...+.++|.++| ++++|+
T Consensus 334 ~~gl~~~~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 334 IGGIEGIIDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp SCCEEEECCHHHHHHHH-HHTTSH
T ss_pred cceeeCCCCHHHHHHHH-HHhcCH
Confidence 6 66655999999999 999986
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.87 E-value=9.5e-09 Score=88.03 Aligned_cols=130 Identities=12% Similarity=0.201 Sum_probs=92.7
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhh--hccCCCcEEEEeccCh---HHhhccccc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSD--ETLTSHKSLVVSWCPQ---LEVLAHEAT 353 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~--~~~~~~nv~~~~~~p~---~~ll~~~~~ 353 (464)
.+++..|+.. ..+-+..++++++.+ +.+++++..+.....+. ++.+ ....++||.+.+|+++ ..++..+++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~-~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi 100 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAE-RYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG 100 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHH-HHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCccHHHHH-HHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 4667778775 334566677777776 45666554433222221 2222 2226679999999997 488999999
Q ss_pred cceec---cCCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 354 GCFVT---HCGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 354 ~~vI~---HgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|. +.|+ .++.||+++|+|+|+.. ...+...+++. +.|..+ ..+.+++.++|.++++|+
T Consensus 101 --~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 101 --LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-NADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp --EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-CSCHHHHHHHHHHHHHCT
T ss_pred --EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-CCCHHHHHHHHHHHHhCH
Confidence 775 3344 58999999999999865 45667777777 788887 678999999999999887
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.61 E-value=9.3e-06 Score=78.15 Aligned_cols=99 Identities=11% Similarity=0.185 Sum_probs=74.2
Q ss_pred CcEEEEeccChH-Hhhccccccceecc-----CChhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHH
Q 012412 334 HKSLVVSWCPQL-EVLAHEATGCFVTH-----CGWNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRD 407 (464)
Q Consensus 334 ~nv~~~~~~p~~-~ll~~~~~~~vI~H-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~ 407 (464)
.++.+.++.... .+++.+|+ ++.- +|..++.||+++|+|+|+-|...+.......+.+. |.++.. -+.+
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~--~d~~ 334 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV--KNET 334 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC--CSHH
T ss_pred CcEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe--CCHH
Confidence 467777766544 89999998 6642 23478999999999999877766666666666667 877666 4789
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Q 012412 408 AIADCISEILEGERGKELRRNAGKWRKLAK 437 (464)
Q Consensus 408 ~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~ 437 (464)
+|++++.++++|+..+++.+++++..+.-.
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 999999999987223678888887766544
No 47
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.56 E-value=1.4e-06 Score=85.09 Aligned_cols=81 Identities=9% Similarity=0.042 Sum_probs=61.4
Q ss_pred CCCcEEEEeccChH---Hhhccccccceecc---CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCc
Q 012412 332 TSHKSLVVSWCPQL---EVLAHEATGCFVTH---CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 404 (464)
Q Consensus 332 ~~~nv~~~~~~p~~---~ll~~~~~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~ 404 (464)
..+||.+.+++|+. .++..+|+ ||.- =|. .++.||+++|+|+|+ -..+ ....+++. ..|+.++..
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~ 364 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL 364 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC
T ss_pred CcCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC
Confidence 45789999999866 78899999 7742 244 467999999999997 2221 12334445 578877777
Q ss_pred CHHHHHHHHHHHhcCC
Q 012412 405 KRDAIADCISEILEGE 420 (464)
Q Consensus 405 ~~~~l~~~i~~ll~~~ 420 (464)
++++|+++|.++++|+
T Consensus 365 d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 365 NPENIAETLVELCMSF 380 (413)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCH
Confidence 8999999999999886
No 48
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.35 E-value=0.00042 Score=69.78 Aligned_cols=132 Identities=13% Similarity=0.131 Sum_probs=81.9
Q ss_pred CceEEEEeccccc-CCHHHHHHHHHHHhhCCCeEEEEEcCcccC-cCChhhhhhccCCCcEEEEeccChH---Hhhcccc
Q 012412 278 ESVVYVSYGSFVE-LKAEEMEELAWGLKSSDQHFLWVVRESEQA-KLPKKFSDETLTSHKSLVVSWCPQL---EVLAHEA 352 (464)
Q Consensus 278 ~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~~ 352 (464)
+.++++..|.... -..+.+-..+..+.+.+.++++...+.... ..-...... .+.++.+....+.. .+++.+|
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~aD 403 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEK--YPGKVRAVVKFNAPLAHLIMAGAD 403 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHH--STTTEEEECSCCHHHHHHHHHHCS
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhh--cCCceEEEEeccHHHHHHHHHhhh
Confidence 4457777888762 233443333333444466776655443111 011112222 57899998877764 6788999
Q ss_pred ccceecc---CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeec----------cCcCHHHHHHHHHHHhc
Q 012412 353 TGCFVTH---CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKF----------PIVKRDAIADCISEILE 418 (464)
Q Consensus 353 ~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l----------~~~~~~~l~~~i~~ll~ 418 (464)
+ ||.- =|+ .+++||+++|+|+|+.. .......+++. .-|... +..+.++|+++|+++|.
T Consensus 404 ~--~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 404 V--LAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp E--EEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred e--eecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 9 7742 244 47899999999999755 45566666665 555532 24567899999998875
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.27 E-value=3.4e-06 Score=70.86 Aligned_cols=141 Identities=17% Similarity=0.231 Sum_probs=83.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCC----CeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH---Hhhccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSSD----QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL---EVLAHE 351 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~~ 351 (464)
+++++..|+.. +.+-...++++++.+. .+++++..+.....+ ..+.+. ...++.+ +|+|+. .++..+
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~-~~~~~~--~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKI-KLLAQK--LGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHH-HHHHHH--HTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHH-HHHHHH--cCCeEEE-eecCHHHHHHHHHhC
Confidence 57888888875 3345566666666552 344333222211111 112222 2338888 999865 789999
Q ss_pred cccceec----cCChhHHHHHHHhCC-cEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc-hHHH
Q 012412 352 ATGCFVT----HCGWNSTMEALSLGV-PMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER-GKEL 425 (464)
Q Consensus 352 ~~~~vI~----HgG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~-~~~~ 425 (464)
|+ +|. -|...++.||+++|+ |+|+... .......+.+. +. .+...+.+++.++|.++++|++ .+++
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~~~~-~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~ 147 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFALDE-RS--LFEPNNAKDLSAKIDWWLENKLERERM 147 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGCSSG-GG--EECTTCHHHHHHHHHHHHHCHHHHHHH
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhccCC-ce--EEcCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 99 774 233468999999997 9998332 11222222333 33 3335689999999999999862 1234
Q ss_pred HHHHHHHH
Q 012412 426 RRNAGKWR 433 (464)
Q Consensus 426 ~~~a~~l~ 433 (464)
.+++++..
T Consensus 148 ~~~~~~~~ 155 (166)
T 3qhp_A 148 QNEYAKSA 155 (166)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 50
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.24 E-value=3.7e-05 Score=78.31 Aligned_cols=134 Identities=12% Similarity=0.138 Sum_probs=84.1
Q ss_pred eEEEEecccc-cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhh---hhccCC-CcEEEEeccChH---Hhhccc
Q 012412 280 VVYVSYGSFV-ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFS---DETLTS-HKSLVVSWCPQL---EVLAHE 351 (464)
Q Consensus 280 ~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~-~nv~~~~~~p~~---~ll~~~ 351 (464)
+|+ ..|... .....+++.+...+++.+.-.++.+|++ ....+.+. ....+. ++|.+.+++|+. .++..+
T Consensus 378 ~v~-~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~--g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~a 454 (568)
T 2vsy_A 378 VVL-CCFNNSYKLNPQSMARMLAVLREVPDSVLWLLSGP--GEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHA 454 (568)
T ss_dssp CEE-EECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECCS--TTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGC
T ss_pred EEE-EeCCccccCCHHHHHHHHHHHHhCCCcEEEEecCC--HHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcC
Confidence 444 455554 3344555555554455443334445522 11122222 222244 899999999854 779999
Q ss_pred ccccee---ccCChhHHHHHHHhCCcEeccCCccc-hhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 352 ATGCFV---THCGWNSTMEALSLGVPMVAMPQWSD-QSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 352 ~~~~vI---~HgG~~s~~eal~~GvP~v~~P~~~D-Q~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
|+ +| ..|+..++.||+++|+|+|++|-..= -...+..+... |+...+.+ +.+++.+++.++++|+
T Consensus 455 dv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~-~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 455 DL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA-DDAAFVAKAVALASDP 523 (568)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS-SHHHHHHHHHHHHHCH
T ss_pred CE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC-CHHHHHHHHHHHhcCH
Confidence 99 76 23666788999999999999774321 11224566677 77665544 8999999999999986
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.21 E-value=3.3e-05 Score=66.92 Aligned_cols=131 Identities=15% Similarity=0.124 Sum_probs=83.2
Q ss_pred eEEEEecccc-c-CCHHHHHHHHHHHh---hC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEE-EeccChH---Hhhc
Q 012412 280 VVYVSYGSFV-E-LKAEEMEELAWGLK---SS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLV-VSWCPQL---EVLA 349 (464)
Q Consensus 280 ~v~vs~Gs~~-~-~~~~~~~~~~~al~---~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~-~~~~p~~---~ll~ 349 (464)
.+++..|+.. . -..+.+-..+..+. +. +.+++++ |... ....+.+.+.....+||.+ .+++++. .++.
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~-G~~~-~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~ 114 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGD-PELEGWARSLEEKHGNVKVITEMLSREFVRELYG 114 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEE-CCBC-HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEE-CCCC-hHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHH
Confidence 3777888876 3 23444444444442 22 3444444 3321 0011222221111129999 9999854 8899
Q ss_pred cccccceeccC---C-hhHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc-CC
Q 012412 350 HEATGCFVTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE-GE 420 (464)
Q Consensus 350 ~~~~~~vI~Hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~-~~ 420 (464)
.+++ +|.-. | ..++.||+++|+|+|+.. -......+ .. +.|..++..+.+++.++|.++++ |+
T Consensus 115 ~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~~-~~-~~g~~~~~~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 115 SVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-TN-ETGILVKAGDPGELANAILKALELSR 182 (200)
T ss_dssp TCSE--EEECCSCCSSCHHHHHHHHTTCEEEEES----CHHHHHHC-CT-TTCEEECTTCHHHHHHHHHHHHHCCH
T ss_pred HCCE--EEECCCCCCccHHHHHHHHCCCCEEEeC----CCChHHHc-CC-CceEEecCCCHHHHHHHHHHHHhcCH
Confidence 9999 77422 3 467899999999999865 34556666 66 77888876689999999999998 86
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=98.05 E-value=0.00058 Score=64.69 Aligned_cols=103 Identities=12% Similarity=-0.005 Sum_probs=67.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCc-eEEEccCCCCCCCCCCccCHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSI-PLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
||||++...+.|++.-+.++.++|+++ +.+|++++.+...+.+. ....+ .++.++. .. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~---~~p~i~~v~~~~~--~~----~~~------- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLS---RMPEVNEAIPMPL--GH----GAL------- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHT---TCTTEEEEEEC--------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh---cCCccCEEEEecC--Cc----ccc-------
Confidence 589999999889999999999999987 99999999987776665 12233 3333331 10 000
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEE
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAP 139 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~ 139 (464)
....+..+.+.+.+ .+||+||.-........++...|+|..+
T Consensus 65 -----~~~~~~~l~~~l~~--~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -----EIGERRKLGHSLRE--KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -----CHHHHHHHHHHTTT--TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -----chHHHHHHHHHHHh--cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 11223456666665 3479999432334456678888999743
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.02 E-value=7.5e-05 Score=74.93 Aligned_cols=139 Identities=12% Similarity=0.076 Sum_probs=95.4
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE--EcCcc--cCcCChhhhhhccCCCcEEEEeccChHH---hhcc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV--VRESE--QAKLPKKFSDETLTSHKSLVVSWCPQLE---VLAH 350 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~--~~~~~~~~~~~~~~~~nv~~~~~~p~~~---ll~~ 350 (464)
..++|.+|+......++.++...+.+++.+..++|. .+... ...+...+. +..+.+++.+.+.+|+.+ .+..
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~-~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFI-KSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHH-HHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHH-HcCCCccEEEcCCCCHHHHHHHHhc
Confidence 358899998887788999999999999988777764 33211 111111111 112457899999998764 5588
Q ss_pred cccccee---ccCChhHHHHHHHhCCcEeccCCcc-chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFV---THCGWNSTMEALSLGVPMVAMPQWS-DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI---~HgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|+ ++ ..+|..|++|||++|||+|.++-.. -...-+..+... |+...+-.-+.++..+...++..|+
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LIA~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLIANTVDEYVERAVRLAENH 589 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGEESSHHHHHHHHHHHHHCH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCcceecCCHHHHHHHHHHHhCCH
Confidence 998 76 4478899999999999999988432 122233445556 6654322346888999999999996
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.94 E-value=2.9e-05 Score=73.23 Aligned_cols=147 Identities=12% Similarity=0.050 Sum_probs=99.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhh--CCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHh---hccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKS--SDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEV---LAHEAT 353 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~l---l~~~~~ 353 (464)
+.+++..|+... .+.+.. .+.+++++-.+.. . + .+ ||.+.+|+|+.++ +..++.
T Consensus 178 ~~~i~yaG~l~k---------~~~L~~l~~~~~f~ivG~G~~-~---~-------l~-nV~f~G~~~~~el~~~l~~~~~ 236 (339)
T 3rhz_A 178 KREIHFPGNPER---------FSFVKEWKYDIPLKVYTWQNV-E---L-------PQ-NVHKINYRPDEQLLMEMSQGGF 236 (339)
T ss_dssp EEEEEECSCTTT---------CGGGGGCCCSSCEEEEESCCC-C---C-------CT-TEEEEECCCHHHHHHHHHTEEE
T ss_pred CcEEEEeCCcch---------hhHHHhCCCCCeEEEEeCCcc-c---C-------cC-CEEEeCCCCHHHHHHHHHhCCE
Confidence 457788888863 122332 3556655543321 1 1 45 9999999999854 555566
Q ss_pred cceeccCCh---------hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHH
Q 012412 354 GCFVTHCGW---------NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKE 424 (464)
Q Consensus 354 ~~vI~HgG~---------~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~ 424 (464)
+++..-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|...+ +.+++.+++..+..+ +.++
T Consensus 237 ~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~--~~~e~~~~i~~l~~~-~~~~ 308 (339)
T 3rhz_A 237 GLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK--DVEEAIMKVKNVNED-EYIE 308 (339)
T ss_dssp EECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES--SHHHHHHHHHHCCHH-HHHH
T ss_pred EEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC--CHHHHHHHHHHhCHH-HHHH
Confidence 555533322 35789999999999754 67888999999 9999996 568888888886533 3467
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012412 425 LRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLA 458 (464)
Q Consensus 425 ~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~ 458 (464)
+++|+++.+++++. |--....+.+.+..|.
T Consensus 309 m~~na~~~a~~~~~----~~f~k~~l~~~~~~~~ 338 (339)
T 3rhz_A 309 LVKNVRSFNPILRK----GFFTRRLLTESVFQAI 338 (339)
T ss_dssp HHHHHHHHTHHHHT----THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc----cHHHHHHHHHHHHHhc
Confidence 89999999888873 3444556666655554
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.93 E-value=0.00068 Score=64.30 Aligned_cols=306 Identities=12% Similarity=0.093 Sum_probs=162.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCce-EEEccCCCCCCCCCCccCHHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIP-LEAISDGYDEGGYAQAESIEA 87 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 87 (464)
...+|||++...+.|++.-+.++.++|+++ +.+|++++.+.+.+.+.. ...+. ++.++.. . ...
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~---~p~vd~vi~~~~~-------~---~~~ 72 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY---NPNIDELIVVDKK-------G---RHN 72 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS---CTTCSEEEEECCS-------S---HHH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc---CCCccEEEEeCcc-------c---ccc
Confidence 456799999999999999999999999987 999999999988887772 33443 4444421 0 011
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCc-cEEEeCCchhhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCC
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPV-DCIVYDSILLWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGN 166 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~-DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 166 (464)
.+. .+..+++++.. +.| |++|.-....-...++...|+|..+=...... ..+++..
T Consensus 73 ~~~--------~~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~riG~~~~~~-----~~~~~~~-------- 129 (349)
T 3tov_A 73 SIS--------GLNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITTGMSHFLF-----RPFMTKY-------- 129 (349)
T ss_dssp HHH--------HHHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEEECCCTTT-----GGGCSEE--------
T ss_pred cHH--------HHHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEEecCCCCc-----ccccccc--------
Confidence 111 12234444443 348 99997555555667888899996542111000 0000000
Q ss_pred ceeCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHhhhccCCcEEEecchhhhhHHHHHHHHhcCCeeeecccCCCccc
Q 012412 167 EILLPGMPPLEPQDMPSFIHDLGSYPAVSYMMMKFQFENIDKADWVLCNTFYELEEEVVEWLRKTWSLRTIGPTIPSFYL 246 (464)
Q Consensus 167 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~vgp~~~~~~~ 246 (464)
.+ . ...... . .+. +...+.. .|.-...
T Consensus 130 ---~~-------------~-~~~~~h-~-------------------------v~r-~~~ll~~------lg~~~~~--- 156 (349)
T 3tov_A 130 ---TR-------------L-DRKTRH-A-------------------------ADM-YINVLEQ------LGVTDTS--- 156 (349)
T ss_dssp ---CC-------------C-CTTTSC-H-------------------------HHH-HHHHHHH------TTCCCCC---
T ss_pred ---cc-------------C-CCCCcc-H-------------------------HHH-HHHHHHH------hCCCccC---
Confidence 00 0 000000 0 010 1111111 1100000
Q ss_pred cccccCccccccccccc--chhHHHHHhhc---CCCCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcc
Q 012412 247 DKQIEDDKDYGFSMFKS--STEACMKWLND---RAKESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESE 318 (464)
Q Consensus 247 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~---~~~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 318 (464)
.....++.+ ..+...+++.. .++++.|.+..|+.. ..+.+.+.++++.+.+.+.++++ +++..
T Consensus 157 --------~~~~~l~~~~~~~~~~~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~ 227 (349)
T 3tov_A 157 --------NSGLHIEICEEWRCQAQEFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPM 227 (349)
T ss_dssp --------CCCCCCCCCHHHHHHHHHHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTT
T ss_pred --------CCceeeeCCHHHHHHHHHHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcc
Confidence 000000001 11223344432 235678999988853 56889999999988766888876 44432
Q ss_pred cCcCChhhhhhccCCCcE-EEEecc--C-hHHhhccccccceeccCChhHHHHHHHhCCcEecc--CCc-------cch-
Q 012412 319 QAKLPKKFSDETLTSHKS-LVVSWC--P-QLEVLAHEATGCFVTHCGWNSTMEALSLGVPMVAM--PQW-------SDQ- 384 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~nv-~~~~~~--p-~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~v~~--P~~-------~DQ- 384 (464)
.....+++.+. .+.++ .+.+-. . ..+++.++++ +|+. -.|+++-|.+.|+|+|++ |.. .++
T Consensus 228 e~~~~~~i~~~--~~~~~~~l~g~~sl~e~~ali~~a~~--~i~~-DsG~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~ 302 (349)
T 3tov_A 228 DLEMVQPVVEQ--METKPIVATGKFQLGPLAAAMNRCNL--LITN-DSGPMHVGISQGVPIVALYGPSNPFFYGPYQAHA 302 (349)
T ss_dssp THHHHHHHHHT--CSSCCEECTTCCCHHHHHHHHHTCSE--EEEE-SSHHHHHHHTTTCCEEEECSSCCHHHHSCTTCSE
T ss_pred hHHHHHHHHHh--cccccEEeeCCCCHHHHHHHHHhCCE--EEEC-CCCHHHHHHhcCCCEEEEECCCCccccCCCCCCe
Confidence 22222333332 23333 222222 2 3389999999 9998 456666699999999984 111 010
Q ss_pred ----hhHHHHHHhH--hcce----eeccCcCHHHHHHHHHHHhcC
Q 012412 385 ----STNAKYILDV--WKTG----LKFPIVKRDAIADCISEILEG 419 (464)
Q Consensus 385 ----~~na~rl~~~--~G~g----~~l~~~~~~~l~~~i~~ll~~ 419 (464)
.....++... ..+. ..+...+++++.++++++|..
T Consensus 303 ~vl~~~~~C~C~~~~~~~C~~~~~~Cm~~I~~~~V~~a~~~lL~~ 347 (349)
T 3tov_A 303 IVLETMDSYEIGKSMKKIIKEGNYKGLSVISEEQVIKAAETLLLE 347 (349)
T ss_dssp EEECHHHHHHHHHHTTCCCCGGGCSTTTTSCHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcCccCCccCCCCCCccchhhcCCHHHHHHHHHHHHhh
Confidence 0111112221 0221 112278999999999988853
No 56
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.91 E-value=0.00052 Score=71.63 Aligned_cols=141 Identities=16% Similarity=0.222 Sum_probs=99.6
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccC--cCChhhhhhccCCCcEEEEeccChH---Hhhcc
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQA--KLPKKFSDETLTSHKSLVVSWCPQL---EVLAH 350 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~nv~~~~~~p~~---~ll~~ 350 (464)
+++.+||.+|.......++.+..-.+.|++.+.-++|........ .+...+......++++.+.+..|.. ..+..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~ 599 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQL 599 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCC
Confidence 345699999988888899999999999999999888887553211 1111122211145789999988866 45566
Q ss_pred cccccee---ccCChhHHHHHHHhCCcEeccCCcc-chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFV---THCGWNSTMEALSLGVPMVAMPQWS-DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI---~HgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
+|+ ++ ..+|.+|++|||.+|||+|.++-.. =...-+..+..+ |+...+ .-+.++..+.-.++-.|.
T Consensus 600 ~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~i-a~~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 600 ADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELI-AKNRQEYEDIAVKLGTDL 669 (723)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGB-CSSHHHHHHHHHHHHHCH
T ss_pred CeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCcccc-cCCHHHHHHHHHHHhcCH
Confidence 777 76 4889999999999999999998422 233445556666 766544 346677777666777775
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.31 E-value=0.0055 Score=57.31 Aligned_cols=131 Identities=14% Similarity=0.050 Sum_probs=82.2
Q ss_pred CCceEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec--cCh-HHhhcc
Q 012412 277 KESVVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW--CPQ-LEVLAH 350 (464)
Q Consensus 277 ~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~--~p~-~~ll~~ 350 (464)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++..++.......+++.+. . +++.+.+- +.+ .+++.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~--~-~~~~l~g~~sl~el~ali~~ 253 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEG--F-AYVEVLPKMSLEGVARVLAG 253 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTT--C-TTEEECCCCCHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhh--C-CcccccCCCCHHHHHHHHHh
Confidence 4568888888754 5688999999998877678877654443222222233222 2 34544432 223 389999
Q ss_pred ccccceeccCChhHHHHHHHhCCcEecc--CCccchhhHHHHHHhHhcce--------eeccCcCHHHHHHHHHHHhcCC
Q 012412 351 EATGCFVTHCGWNSTMEALSLGVPMVAM--PQWSDQSTNAKYILDVWKTG--------LKFPIVKRDAIADCISEILEGE 420 (464)
Q Consensus 351 ~~~~~vI~HgG~~s~~eal~~GvP~v~~--P~~~DQ~~na~rl~~~~G~g--------~~l~~~~~~~l~~~i~~ll~~~ 420 (464)
|++ +|+.- .|+++=|.+.|+|+|++ |..... ++ = ||-. ..+...+++++.+++.++|++.
T Consensus 254 a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~--~~----P-~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~~ 323 (326)
T 2gt1_A 254 AKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGL--IG----G-YGKNQMVCRAPGNELSQLTANAVKQFIEENAEKA 323 (326)
T ss_dssp CSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHH--HC----C-CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTTC
T ss_pred CCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhh--cC----C-CCCCceEecCCcccccCCCHHHHHHHHHHHHHHh
Confidence 999 99983 45566688899999986 321111 00 0 0111 1122789999999999999764
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=94.83 E-value=0.29 Score=43.16 Aligned_cols=114 Identities=10% Similarity=0.111 Sum_probs=68.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
+||||+..--|. |---+.+|+++|.+.| +|+++.+...++-.-++. ....+.+..+..+.. +.-..++..-.+
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~---~~v~GTPaDCV~- 74 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY---TVIDGTPADCVH- 74 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE---EETTCCHHHHHH-
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe---EEECCCHHHHHH-
Confidence 479988877775 5667889999999888 999999988776665431 233455555543210 111222222211
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCC----------ch---hhHHHHHHHcCCccEEEecc
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS----------IL---LWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~~giP~v~~~~~ 143 (464)
--+..+....+| |+||+.. ++ ..++.-|..+|||.|.+|..
T Consensus 75 ----------lal~~l~~~~~P-DLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 75 ----------LGYRVILEEKKP-DLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ----------HHHHTTTTTCCC-SEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ----------HHHHHhcCCCCC-CEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 112233322245 9999753 12 33455678899999998754
No 59
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=94.66 E-value=0.082 Score=46.78 Aligned_cols=117 Identities=11% Similarity=0.075 Sum_probs=65.8
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHH
Q 012412 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIE 86 (464)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~ 86 (464)
+.+.++||||+..--|. +---+.+|+++|.+ +|+|+++.+...++-.-++. ....+.+..+..++ +.-..++.
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~----~~v~GTPa 79 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSLTLNAPLHIKNLENGM----ISVEGTPT 79 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCCCCSSCEEEEECTTSC----EEESSCHH
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccceecCCCeEEEEecCCe----EEECCCHH
Confidence 34566799999887776 66678899999976 89999999988776655321 22345555543221 11222222
Q ss_pred HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCC---------chhhHH----HHHHHcCCccEEEecc
Q 012412 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDS---------ILLWAL----DVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~---------~~~~~~----~~A~~~giP~v~~~~~ 143 (464)
.-...- +..+.. .+| |+||+.. ....|- .-|..+|||.|.+|..
T Consensus 80 DCV~la-----------l~~l~~-~~P-DLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 80 DCVHLA-----------ITGVLP-EMP-DMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp HHHHHH-----------TTTTSS-SCC-SEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred HHHHHH-----------HHHhcC-CCC-CEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 221111 122222 145 9999743 122232 2246789999998653
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=93.86 E-value=0.89 Score=44.64 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=73.3
Q ss_pred cEEEEeccChH---Hhhccccccceec---cCChhH-HHHHHHhC---CcEeccCCccchhhHHHHHHhHhcceeeccCc
Q 012412 335 KSLVVSWCPQL---EVLAHEATGCFVT---HCGWNS-TMEALSLG---VPMVAMPQWSDQSTNAKYILDVWKTGLKFPIV 404 (464)
Q Consensus 335 nv~~~~~~p~~---~ll~~~~~~~vI~---HgG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~ 404 (464)
.|.+.+.+|+. .++..+++ ++. .=|+|. ..||+++| .|+|+--+.+ .+.-+.+ .|+.++..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECCC
Confidence 68888888875 77888998 663 468875 59999996 6666544322 2333312 36777767
Q ss_pred CHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 405 KRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 405 ~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
+.++++++|.++|.++. ++-+++.+++.+.++ .-....-.+.+++.|...
T Consensus 424 D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp BHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 89999999999998752 133444445555544 245566677777777543
No 61
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=93.20 E-value=1 Score=39.87 Aligned_cols=114 Identities=10% Similarity=0.111 Sum_probs=65.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|.|||+..--|. +---+.+|+++|.+.| +|+++.+...++-.-++. ....+++..+..... .....++..-..
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~~---~~v~GTPaDCV~- 74 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY---TVIDGTPADCVH- 74 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE---EETTCCHHHHHH-
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccce---eecCCChHHHHh-
Confidence 457887776665 4556888999999888 599999887766555332 233455555442110 011122221111
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCC----------ch---hhHHHHHHHcCCccEEEecc
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS----------IL---LWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~~giP~v~~~~~ 143 (464)
--+..+..+.+| |+||+.. ++ ..++.-|..+|||.|.+|..
T Consensus 75 ----------lal~~~l~~~~P-DLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 75 ----------LGYRVILEEKKP-DLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ----------HHHHTTTTTCCC-SEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ----------hhhhhhcCCCCC-CEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 112233333245 9999833 22 34566678999999998753
No 62
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=92.64 E-value=1.3 Score=38.81 Aligned_cols=112 Identities=14% Similarity=0.078 Sum_probs=67.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCC---CCCCCCCccCHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGY---DEGGYAQAESIEAYL 89 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~ 89 (464)
||||+..--|. +---+.+|+++|.+.| +|+++.+...++-.-++ .....+++..++.+. ....+.-..++..-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 57887766665 5556889999999888 89999998877766543 224457777765321 000122223333222
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCC----------c---hhhHHHHHHHcCCccEEEec
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDS----------I---LLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~---~~~~~~~A~~~giP~v~~~~ 142 (464)
+.-. . +. .++|+||+.. + +..++.-|..+|||.|.+|.
T Consensus 79 ~lal-----------~-l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 ALGL-----------H-LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHH-----------H-HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHH-----------c-CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 2111 1 21 2349999743 1 23345557889999999865
No 63
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=92.54 E-value=2.3 Score=35.27 Aligned_cols=133 Identities=13% Similarity=0.114 Sum_probs=71.1
Q ss_pred hHHHHHhhcCCCCceEEEEecc-cccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh
Q 012412 266 EACMKWLNDRAKESVVYVSYGS-FVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ 344 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~ 344 (464)
.++-++|.++ ....|+-|. .. .+....++..+.+.+++-+++.. ....+... -....+++..+.
T Consensus 35 ~~lg~~La~~---g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-~~~~~~~~------~~~~i~~~~~~~ 99 (176)
T 2iz6_A 35 NELGKQIATH---GWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-DTSEISDA------VDIPIVTGLGSA 99 (176)
T ss_dssp HHHHHHHHHT---TCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------CCTT------CSEEEECCCCSS
T ss_pred HHHHHHHHHC---CCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-hhhhhccC------CceeEEcCCHHH
Confidence 4555666653 256666665 33 45555665555566767666543 11121111 122344566665
Q ss_pred H-Hhh-ccccccceeccCChhHHH---HHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 345 L-EVL-AHEATGCFVTHCGWNSTM---EALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 345 ~-~ll-~~~~~~~vI~HgG~~s~~---eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
. .++ ..++. .++--||+||+. |++.+++|++++|.|. .....+... -.....-.-+++++.+.+.+.+.
T Consensus 100 Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 100 RDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp SCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEcCCHHHHHHHHHHHHH
Confidence 5 333 34443 455678899874 5578999999999843 111122222 22222224577888877776654
No 64
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=92.43 E-value=1.2 Score=39.22 Aligned_cols=114 Identities=10% Similarity=0.042 Sum_probs=66.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--|. |---+.+|+++|.+.| +|+++.+...++-.-++ .....+++..+..+-....+.-..++..-.+.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~l- 77 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKL- 77 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHH-
Confidence 57887766665 5556889999998888 89999998877666543 22334566665432000011112222222111
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCC----------c---hhhHHHHHHHcCCccEEEec
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS----------I---LLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~---~~~~~~~A~~~giP~v~~~~ 142 (464)
-+..+.. .++|+||+.. + +..++.-|..+|||.|.+|.
T Consensus 78 ----------al~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 78 ----------AYNVVMD--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ----------HHHTTST--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----------HHHhhcc--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 1222332 2349999743 1 23345557889999999865
No 65
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=92.35 E-value=0.78 Score=45.13 Aligned_cols=108 Identities=11% Similarity=0.052 Sum_probs=69.3
Q ss_pred cEE-EEeccChH---Hhhccccccceec---cCChh-HHHHHHHhCC-----cEeccCCcc--chhhHHHHHHhHhccee
Q 012412 335 KSL-VVSWCPQL---EVLAHEATGCFVT---HCGWN-STMEALSLGV-----PMVAMPQWS--DQSTNAKYILDVWKTGL 399 (464)
Q Consensus 335 nv~-~~~~~p~~---~ll~~~~~~~vI~---HgG~~-s~~eal~~Gv-----P~v~~P~~~--DQ~~na~rl~~~~G~g~ 399 (464)
+|. +.+++++. .++..+|+ ||. .=|+| ++.||+++|+ |+|+.-..+ ++. ..|+
T Consensus 332 ~v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l----------~~g~ 399 (482)
T 1uqt_A 332 PLYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----------TSAL 399 (482)
T ss_dssp SEEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC----------TTSE
T ss_pred eEEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh----------CCeE
Confidence 355 45788876 67889999 663 34665 6799999998 676644332 222 2256
Q ss_pred eccCcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhh
Q 012412 400 KFPIVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSDSNIDEFVASLACS 460 (464)
Q Consensus 400 ~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~~~~~l~~~ 460 (464)
.++..+.++++++|.++|+++. +.-+++.++..+.+++ -+.....+.+++.+...
T Consensus 400 lv~p~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 400 IVNPYDRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp EECTTCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred EECCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 6666789999999999998641 1233333444444432 35566777777777654
No 66
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=91.26 E-value=2.1 Score=38.35 Aligned_cols=113 Identities=13% Similarity=0.025 Sum_probs=66.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEAYLERF 92 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 92 (464)
||||+..--|. +---+.+|+++|.+.| +|+++.+...++-.-++ .....+++..++.+-.. .+.-..++..-...
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~-~~~v~GTPaDCV~l- 76 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFR-AIATSGTPSDTVYL- 76 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSE-EEEESSCHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCc-eEEECCcHHHHHHH-
Confidence 57887766665 5556889999999888 99999998877666543 22344666665431001 12222222222111
Q ss_pred HHhCcHHHHHHHHHhcCCCCCccEEEeCC-----------c---hhhHHHHHHHcCCccEEEecc
Q 012412 93 WQIGPQTLTELVEKMNGSDSPVDCIVYDS-----------I---LLWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 93 ~~~~~~~l~~~~~~l~~~~~p~DlVI~D~-----------~---~~~~~~~A~~~giP~v~~~~~ 143 (464)
-+..+ . .++|+||+.. + +..++.-|..+|||.|.+|..
T Consensus 77 ----------al~~l-~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 77 ----------ATFGL-G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ----------HHHHH-T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ----------HHhcC-C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 12223 2 2349999643 1 133455578899999998763
No 67
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=89.76 E-value=1.2 Score=45.40 Aligned_cols=77 Identities=14% Similarity=0.185 Sum_probs=46.8
Q ss_pred CcEEEE---eccCh---------HHhhccccccceecc---CCh-hHHHHHHHhCCcEeccCCccchhhHHHHHHh----
Q 012412 334 HKSLVV---SWCPQ---------LEVLAHEATGCFVTH---CGW-NSTMEALSLGVPMVAMPQWSDQSTNAKYILD---- 393 (464)
Q Consensus 334 ~nv~~~---~~~p~---------~~ll~~~~~~~vI~H---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~---- 393 (464)
++|.++ .|++. .++++.|++ ||.- =|+ .+.+||+++|+|+|+.-.. .....+.+
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g----G~~d~V~dg~~~ 563 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS----GFGSYMEDLIET 563 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB----HHHHHHHTTSCH
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC----Chhhhhhccccc
Confidence 455544 58765 468999999 7743 344 4789999999999975543 22222222
Q ss_pred ---Hhcceeecc---CcCHHHHHHHHHHHh
Q 012412 394 ---VWKTGLKFP---IVKRDAIADCISEIL 417 (464)
Q Consensus 394 ---~~G~g~~l~---~~~~~~l~~~i~~ll 417 (464)
. +.|+.+. ..+.+++.++|.++|
T Consensus 564 ~~~~-~tG~lV~~rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 564 NQAK-DYGIYIVDRRFKAPDESVEQLVDYM 592 (725)
T ss_dssp HHHH-HTTEEEECCSSSCHHHHHHHHHHHH
T ss_pred cCCC-CceEEEeCCCCCCHHHHHHHHHHHH
Confidence 2 3565552 345555555554444
No 68
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=88.50 E-value=3 Score=36.77 Aligned_cols=110 Identities=15% Similarity=0.095 Sum_probs=64.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCC-CCCCceEEEccCCCCCCCCCCc-cCHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDS-SSSSIPLEAISDGYDEGGYAQA-ESIEAYLER 91 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~ 91 (464)
||||+..--|. |---+.+|+++|++.| +|+++.+...++-.-++. ....+++..+... .+.-. .++..-...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~~~----~~~v~~GTPaDCV~l 75 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSLTLESSLRTFTFDNG----DIAVQMGTPTDCVYL 75 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCEEEECTTS----CEEEETCCHHHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCcCCCCCeEEEEeCCC----CeEECCCCHHHHHHH
Confidence 68888777765 5567889999998776 999999988776665431 2333555544211 12222 333322221
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCC----------ch---hhHHHHHHHcCCccEEEec
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS----------IL---LWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~~giP~v~~~~ 142 (464)
-+..+.. .++|+||+.. ++ ..++.-|..+|||.|.+|.
T Consensus 76 -----------al~~ll~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 76 -----------GVNALMR--PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp -----------HHHTTSS--SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred -----------HHhhccC--CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 1222332 2359999743 22 2233335669999999865
No 69
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=88.03 E-value=0.42 Score=49.82 Aligned_cols=148 Identities=11% Similarity=0.043 Sum_probs=90.8
Q ss_pred HHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEE-eccChHHhhccccccceeccCChhHHHHHHHhCCc
Q 012412 296 MEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVV-SWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVP 374 (464)
Q Consensus 296 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP 374 (464)
+..+.+.+.. ++.+++..+......... .+ ..+.+.-+ ++.+-.++|..+|+ +||= =++.+.|.+..++|
T Consensus 566 ~~~l~~~l~~-~~~li~r~Hp~~~~~~~~--~~---~~~~~~~~~~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kP 636 (729)
T 3l7i_A 566 LDNLYKELGD-DYVILLRMHYLISNALDL--SG---YENFAIDVSNYNDVSELFLISDC--LITD-YSSVMFDYGILKRP 636 (729)
T ss_dssp HHHHHHHHTT-TEEEEECCCHHHHTTCCC--TT---CTTTEEECTTCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCC
T ss_pred HHHHHHHcCC-CeEEEEecCcchhccccc--cc---cCCcEEeCCCCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCC
Confidence 4555555543 556665554321111110 00 23334333 45667799999999 9987 56678999999999
Q ss_pred EeccCCccchhhHHHHHHhHhcceeec----c---CcCHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHcCCCcH
Q 012412 375 MVAMPQWSDQSTNAKYILDVWKTGLKF----P---IVKRDAIADCISEILEGERGKELRRNAGKWRKLAKEAVAKGGSSD 447 (464)
Q Consensus 375 ~v~~P~~~DQ~~na~rl~~~~G~g~~l----~---~~~~~~l~~~i~~ll~~~~~~~~~~~a~~l~~~~~~~~~~gg~~~ 447 (464)
+|......|++.+- .. |.=..+ + --+.++|.++|.....+. ..++++.+++.+.+... .+|.+++
T Consensus 637 iif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ 708 (729)
T 3l7i_A 637 QFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLAKELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQ 708 (729)
T ss_dssp EEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHHHHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHH
T ss_pred EEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHHHHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHH
Confidence 99987666665431 12 322111 1 357889999998877532 26777777777777543 4566667
Q ss_pred HHHHHHHHHHHhh
Q 012412 448 SNIDEFVASLACS 460 (464)
Q Consensus 448 ~~~~~~~~~l~~~ 460 (464)
+.++.+++.....
T Consensus 709 ri~~~i~~~~~~~ 721 (729)
T 3l7i_A 709 YIGDLIHKDIKEQ 721 (729)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcCc
Confidence 7666666665543
No 70
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=86.51 E-value=4.7 Score=33.99 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=62.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc------ccccccCCCCCCceEEEccCCCCCCCCCCccCHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF------YKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIE 86 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 86 (464)
+-.|++++..|.|-..-.+.+|-..+.+|++|.|+..-.. ...+. .-++.++....++.. .. ....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~----~L~v~~~~~g~gf~~---~~-~~~~ 99 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLE----PHGVEFQVMATGFTW---ET-QNRE 99 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHG----GGTCEEEECCTTCCC---CG-GGHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHH----hCCcEEEEccccccc---CC-CCcH
Confidence 4478889999999999999999999999999999965442 12333 224788887765532 11 1111
Q ss_pred HHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchh
Q 012412 87 AYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILL 124 (464)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~ 124 (464)
.- .......+....+.+.. ..+|+||.|....
T Consensus 100 ~~----~~~a~~~l~~a~~~l~~--~~yDlvILDEi~~ 131 (196)
T 1g5t_A 100 AD----TAACMAVWQHGKRMLAD--PLLDMVVLDELTY 131 (196)
T ss_dssp HH----HHHHHHHHHHHHHHTTC--TTCSEEEEETHHH
T ss_pred HH----HHHHHHHHHHHHHHHhc--CCCCEEEEeCCCc
Confidence 11 11113344455454443 3479999997653
No 71
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=82.61 E-value=8.5 Score=33.85 Aligned_cols=114 Identities=15% Similarity=0.153 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeCcccccccc-cCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH---HhC--------
Q 012412 29 PLLQFSRRLQHKGIKVTLVTTRFFYKSLH-RDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW---QIG-------- 96 (464)
Q Consensus 29 p~l~la~~L~~rGh~V~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~-------- 96 (464)
-...+....+++|-+|.|+++......+. +.....|-.++ -..|....+++.......++.+. ...
T Consensus 53 ~A~~~i~~~a~~gg~iLfVgTk~~a~~~V~~~A~~~g~~yv--~~RWlgG~LTN~~ti~~~i~~l~~le~~~~~g~f~~l 130 (256)
T 2vqe_B 53 RTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYV--NQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEER 130 (256)
T ss_dssp HHHHHHHHHHTTTCCEEEECCSSSSTTTTTTTTTSSSCCEE--CSCCCTTTTTTHHHHHHHHHHHHHHHHHTTSTTSSCS
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHHhCCeee--cCeeCCCcccCHHHHHHHHHHHHHHHHHhhcCccccc
Confidence 33444555667899999999976554433 11223333333 23354434455444433333222 110
Q ss_pred --------cHHHHHHHHH---hcCCCCCccEEEe-CCch-hhHHHHHHHcCCccEEEecch
Q 012412 97 --------PQTLTELVEK---MNGSDSPVDCIVY-DSIL-LWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 97 --------~~~l~~~~~~---l~~~~~p~DlVI~-D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (464)
...+..+-+. +..-.+.||+||. |+.. ..+..=|..+|||+|.+.-+.
T Consensus 131 ~Kke~~~~~r~~~kL~k~lgGik~m~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 131 PKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CHHHHTTHHHHHHHHHHHSTTGGGCSSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cHHHHHHHHHHHHHHHHhhcCccccccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 0011111111 1111122488885 6655 556777999999999876654
No 72
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=81.43 E-value=1.5 Score=41.45 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=30.8
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|++|++++. +|-|-..-...+|..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 457876554 4559999999999999999999999988
No 73
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=77.96 E-value=24 Score=28.67 Aligned_cols=142 Identities=14% Similarity=0.072 Sum_probs=79.6
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccce
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~v 356 (464)
-+|.|-|-+||.+ +....++....|+.++..+-+.+-+. ...|+.+.+. +.+.. -..+++ +
T Consensus 10 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--HR~p~~l~~~------------~~~a~-~~g~~V--i 70 (170)
T 1xmp_A 10 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--HRTPDYMFEY------------AETAR-ERGLKV--I 70 (170)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTSHHHHHHH------------HHHTT-TTTCCE--E
T ss_pred CCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec--cCCHHHHHHH------------HHHHH-hCCCcE--E
Confidence 3567888888876 67888899999999998877666554 3344433211 00000 012445 7
Q ss_pred eccCCh----hHHHHHHHhCCcEeccCCccch-hhHHH--HHHhH-hcceee-cc-C----cCHHHHHHHHHHHhcCCch
Q 012412 357 VTHCGW----NSTMEALSLGVPMVAMPQWSDQ-STNAK--YILDV-WKTGLK-FP-I----VKRDAIADCISEILEGERG 422 (464)
Q Consensus 357 I~HgG~----~s~~eal~~GvP~v~~P~~~DQ-~~na~--rl~~~-~G~g~~-l~-~----~~~~~l~~~i~~ll~~~~~ 422 (464)
|.=.|. .++.-+ ..-+|++.+|..... ..... -..++ -|+.+. +. + +++.-++..|- -+.|+
T Consensus 71 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~-- 146 (170)
T 1xmp_A 71 IAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHD-- 146 (170)
T ss_dssp EEEEESSCCHHHHHHT-TCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHH-HTTCH--
T ss_pred EEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHH-ccCCH--
Confidence 765553 233333 347899999975421 11111 12231 044321 11 2 44455554443 34565
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 012412 423 KELRRNAGKWRKLAKEAVAK 442 (464)
Q Consensus 423 ~~~~~~a~~l~~~~~~~~~~ 442 (464)
+++++.+.+++..++.+.+
T Consensus 147 -~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 -DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp -HHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHHHHHHh
Confidence 8999999999888876443
No 74
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=77.58 E-value=5.2 Score=32.58 Aligned_cols=43 Identities=21% Similarity=0.166 Sum_probs=37.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
++.+|++.+.++-+|-....-++..|..+|++|.++......+
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e 59 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPE 59 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 4679999888899999999999999999999999987654333
No 75
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=77.14 E-value=3.6 Score=34.90 Aligned_cols=46 Identities=20% Similarity=-0.008 Sum_probs=36.3
Q ss_pred CCCcEEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 11 CKLAHCLVLTYPGQGHIN-PLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~-p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
.++.||++.-.|+ +... -...+.+.|+++|++|.++.++.....+.
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTC
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHH
Confidence 3456898876666 4445 78999999999999999999987766555
No 76
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=75.87 E-value=13 Score=35.58 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=48.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
.||+++..+.. .. .+.++.++.|++|+++.......... ...--.++.++.. . +...+.
T Consensus 6 k~l~Il~~~~~--~~---~i~~aa~~lG~~vv~v~~~~~~~~~~---~~~~d~~~~~~~~------~---d~~~~~---- 64 (425)
T 3vot_A 6 KNLAIICQNKH--LP---FIFEEAERLGLKVTFFYNSAEDFPGN---LPAVERCVPLPLF------E---DEEAAM---- 64 (425)
T ss_dssp CEEEEECCCTT--CC---HHHHHHHHTTCEEEEEEETTSCCCCS---CTTEEEEEEECTT------T---CHHHHH----
T ss_pred cEEEEECCChh--HH---HHHHHHHHCCCEEEEEECCCcccccC---HhhccEEEecCCC------C---CHHHHH----
Confidence 47888765432 22 35677788899999887643321111 0111234444411 1 111111
Q ss_pred HhCcHHHHHHHHHhcCCCCCccEEEe--CCchhhHHHHHHHcCCcc
Q 012412 94 QIGPQTLTELVEKMNGSDSPVDCIVY--DSILLWALDVAKKFGLLG 137 (464)
Q Consensus 94 ~~~~~~l~~~~~~l~~~~~p~DlVI~--D~~~~~~~~~A~~~giP~ 137 (464)
+.+.++..+ .++|.|++ |.....+..+++.+|+|.
T Consensus 65 --------~~~~~~~~~-~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 --------DVVRQTFVE-FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp --------HHHHHHHHH-SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred --------HHHHHhhhh-cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 222222211 35799986 333345677889999994
No 77
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=75.80 E-value=4.2 Score=34.73 Aligned_cols=45 Identities=13% Similarity=0.077 Sum_probs=36.1
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
.+++||++.-.|+.+-+. ...+.+.|.++| +|.++.++.....+.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 345789987777777665 899999999999 999999988776665
No 78
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=75.33 E-value=3.2 Score=35.39 Aligned_cols=52 Identities=21% Similarity=0.176 Sum_probs=35.8
Q ss_pred CCCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCcccccccc
Q 012412 5 GKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 5 ~~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~~~~~~ 57 (464)
++.+...++.||++.-.|+.+-+ -...+.+.|.+ +|++|.++.++...+.+.
T Consensus 11 ~~~~~~l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 11 AAAPLMERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp -----CCSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred hhhhcccCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 33444456678998777776644 45899999999 899999999988776665
No 79
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=74.93 E-value=4.3 Score=37.59 Aligned_cols=39 Identities=15% Similarity=0.073 Sum_probs=32.8
Q ss_pred CcEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+++|+| ..-||-|-..-...+|..|+++|++|.++....
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 456775 445677999999999999999999999999874
No 80
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=74.69 E-value=2 Score=36.25 Aligned_cols=45 Identities=9% Similarity=-0.001 Sum_probs=35.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
+..||++.-.|+.|=+. ...+.+.|.++|++|.++.++.....+.
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSC
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 45689887777665554 7899999999999999999987766554
No 81
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=74.65 E-value=4.7 Score=33.31 Aligned_cols=43 Identities=14% Similarity=0.114 Sum_probs=34.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
+||++.-.|+.|=+ -...+.+.|+++|++|.++.++...+.+.
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 58888666665555 48899999999999999999987776665
No 82
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=74.44 E-value=2.8 Score=33.17 Aligned_cols=47 Identities=21% Similarity=0.291 Sum_probs=35.7
Q ss_pred CCCcEEEE-EcCCCc-cChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 11 CKLAHCLV-LTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 11 ~~~~~il~-~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
.+.||+|+ +-.|.. -.+.-.+=++..|.++||+|++++++.....++
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 34578875 444433 666677888999999999999999998887776
No 83
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=74.13 E-value=3 Score=35.64 Aligned_cols=44 Identities=9% Similarity=0.003 Sum_probs=36.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
++||++.-.|+.|-+. ...|.+.|.++|++|.++.++.....+.
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 3589887777766655 8899999999999999999988777665
No 84
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=73.38 E-value=9.4 Score=33.77 Aligned_cols=46 Identities=11% Similarity=-0.030 Sum_probs=39.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
.+..+|++.+.++-.|-....-++..|.++|++|.+++.....+.+
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l 166 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEV 166 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHH
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 3466899999999999999999999999999999999865444443
No 85
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=73.15 E-value=6.6 Score=34.54 Aligned_cols=46 Identities=13% Similarity=0.096 Sum_probs=29.1
Q ss_pred CCCCCCCCCCcEEEEEcCCCc-----------cChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 4 NGKKPTSCKLAHCLVLTYPGQ-----------GHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 4 ~~~~~~~~~~~~il~~~~~~~-----------GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.++||+. |+|||++-.+.. -...=+..--..|.+.|++|+++++..
T Consensus 2 ~~~m~~~--mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 2 PGSMAPL--PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp -----CC--CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred Ccccccc--CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4677764 568997555421 124556677889999999999999743
No 86
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=71.91 E-value=5.9 Score=34.26 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=36.4
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
..+++|++...||.|-..-++.+|..|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34678999999999999999999999999999998887754
No 87
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=71.73 E-value=11 Score=31.48 Aligned_cols=38 Identities=18% Similarity=0.378 Sum_probs=30.4
Q ss_pred cEEE-EE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCL-VL-TYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il-~~-~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
||++ |. +-||-|-..-...||..|+++|++|.++-...
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 3555 44 44566999999999999999999999998753
No 88
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=71.56 E-value=11 Score=35.15 Aligned_cols=40 Identities=23% Similarity=0.217 Sum_probs=33.0
Q ss_pred CcEEEEE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 13 LAHCLVL-TYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 13 ~~~il~~-~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
+.+|+|+ .-||-|-..-..+||..|+++|++|.++.....
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4566654 456779999999999999999999999998763
No 89
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=71.55 E-value=6.9 Score=33.88 Aligned_cols=112 Identities=12% Similarity=0.113 Sum_probs=57.9
Q ss_pred HHHHHHHHhCCCeEEEEeCccccccccc-CCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHh-----------Cc-
Q 012412 31 LQFSRRLQHKGIKVTLVTTRFFYKSLHR-DSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQI-----------GP- 97 (464)
Q Consensus 31 l~la~~L~~rGh~V~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~- 97 (464)
..+....+++|-+|.|+++......+.+ .....| ...+-..|....+++.......++.+... ..
T Consensus 54 ~~~i~~~~~~~~~iLfVgTk~~~~~~V~~~A~~~g--~~yv~~rWlgG~LTN~~ti~~~i~~~~~l~~~~~~g~~~~l~K 131 (231)
T 3bbn_B 54 CDLVFDASSRGKQFLIVGTKNKAADSVARAAIRAR--CHYVNKKWLGGMLTNWSTTETRLHKFRDLRMEQTAGRLARLPK 131 (231)
T ss_dssp HHHSHHHHTTTCCEEEECCCTTTHHHHHHHHHHHT--CEECCSSCCSCSSSCHHHHHHHHHHHHHHHHSTTSTTTTTSCH
T ss_pred HHHHHHHHhCCCEEEEEeCcHHHHHHHHHHHHHhC--CccccccccCCCCcCHHHHHHHHHHHHHHHHHHhcCccccCCH
Confidence 3444555678999999999765543321 000112 22233335443455555554444443321 00
Q ss_pred ---HHHHHHHHHhcCCC-------CCccEEEe-CCch-hhHHHHHHHcCCccEEEecch
Q 012412 98 ---QTLTELVEKMNGSD-------SPVDCIVY-DSIL-LWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 98 ---~~l~~~~~~l~~~~-------~p~DlVI~-D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (464)
..+....+++.... +.||+||. |+.. .-+..=|..+|||+|.+.-+.
T Consensus 132 ke~~~~~r~~~kl~k~lgGik~m~~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 132 RDAAVVKRQLSHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp HHHHHHHHHHHHHTTSTTSTTSCCSCCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred HHHHHHHHHHHHHHHhhhcccccccCCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 11222233332211 12488885 6655 446667999999999876543
No 90
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=70.53 E-value=8.5 Score=32.43 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=66.2
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCC-------------CCC----CCCCc-cCHH
Q 012412 25 GHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGY-------------DEG----GYAQA-ESIE 86 (464)
Q Consensus 25 GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-------------~~~----~~~~~-~~~~ 86 (464)
|.+.-.+.+|+.+ +.|.+|.+.-+ ...+.+++ ..++.++.++... ... ++.+. ....
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr~---~~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~ 110 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRG-ATSDYIKK---SVSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKH 110 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHHT---TCSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHH
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHHH---hCCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHH
Confidence 5677788888888 88888655554 45555552 2346666665210 000 11111 1222
Q ss_pred HHHHHHHH--------hCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecch
Q 012412 87 AYLERFWQ--------IGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 87 ~~~~~~~~--------~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~ 144 (464)
.+..++. .....++..++++.++ ++|+||.|. .+...|+++|+|.+.+.++.
T Consensus 111 -~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~--G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 111 -EIEAMLGVKIKEFLFSSEDEITTLISKVKTE--NIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp -HHHHHHTCEEEEEEECSGGGHHHHHHHHHHT--TCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred -HHHHHhCCceEEEEeCCHHHHHHHHHHHHHC--CCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 2333322 2235677888888874 489999983 35779999999999887754
No 91
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=70.30 E-value=33 Score=29.25 Aligned_cols=136 Identities=13% Similarity=0.024 Sum_probs=70.7
Q ss_pred hHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH
Q 012412 266 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL 345 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~ 345 (464)
.++-++|..+. ..+|+-|... -.+....++..+.+..++=+.+.. ..+.+.... .-.++.+.+..+..
T Consensus 31 ~~lg~~LA~~g---~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~---l~~~e~~~~--~~~~~~~~~~~~~R 98 (216)
T 1ydh_A 31 IELGNELVKRK---IDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKA---LMPIEISGE--TVGDVRVVADMHER 98 (216)
T ss_dssp HHHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGG---GHHHHCCSS--CCSEEEEESSHHHH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechh---cCccccccC--CCCcccccCCHHHH
Confidence 45556666532 4556655432 456666666666666666555321 111111000 11335566655544
Q ss_pred --HhhccccccceeccCChhHHHHHH---------HhCCcEeccCCc--cchhh-HHHHHHhHhcc-ee-e---cc-CcC
Q 012412 346 --EVLAHEATGCFVTHCGWNSTMEAL---------SLGVPMVAMPQW--SDQST-NAKYILDVWKT-GL-K---FP-IVK 405 (464)
Q Consensus 346 --~ll~~~~~~~vI~HgG~~s~~eal---------~~GvP~v~~P~~--~DQ~~-na~rl~~~~G~-g~-~---l~-~~~ 405 (464)
.+...+++ .++--||+||+-|.. .+++|++++-.. .|... .-+.+.+. |. .. . +. .-+
T Consensus 99 k~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~-Gfi~~~~~~~~~~~d~ 176 (216)
T 1ydh_A 99 KAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEE-GFIKPGARNIVVSAPT 176 (216)
T ss_dssp HHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHT-TSSCHHHHTTEEEESS
T ss_pred HHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHC-CCCChHHcCeEEEeCC
Confidence 34445554 466789999987765 479999988632 22221 12333333 32 10 0 11 456
Q ss_pred HHHHHHHHHH
Q 012412 406 RDAIADCISE 415 (464)
Q Consensus 406 ~~~l~~~i~~ 415 (464)
++++.+.|.+
T Consensus 177 ~ee~~~~l~~ 186 (216)
T 1ydh_A 177 AKELMEKMEE 186 (216)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777754
No 92
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=70.09 E-value=5.3 Score=31.50 Aligned_cols=44 Identities=7% Similarity=-0.047 Sum_probs=36.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
+.+|++.+.++-+|-....-++..|..+|++|.++......+.+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 35899988888899999999999999999999988765444433
No 93
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=69.22 E-value=12 Score=32.34 Aligned_cols=143 Identities=10% Similarity=-0.010 Sum_probs=76.0
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccc
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGC 355 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~ 355 (464)
.+++++.|..|..+ ...+..|.+.|..+.++-.. +.+++.+.. ...++.+..-.-....|..+++
T Consensus 30 ~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----~~~~l~~l~-~~~~i~~i~~~~~~~dL~~adL-- 94 (223)
T 3dfz_A 30 KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----VSAEINEWE-AKGQLRVKRKKVGEEDLLNVFF-- 94 (223)
T ss_dssp TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----CCHHHHHHH-HTTSCEEECSCCCGGGSSSCSE--
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----CCHHHHHHH-HcCCcEEEECCCCHhHhCCCCE--
Confidence 45678888777443 44556676778887766432 223332211 1234555432223456778888
Q ss_pred eeccCChhHHHHHHH----hCCcEeccCCccchhhHHH-----HHHhHhcceeecc--CcC---HHHHHHHHHHHhcCCc
Q 012412 356 FVTHCGWNSTMEALS----LGVPMVAMPQWSDQSTNAK-----YILDVWKTGLKFP--IVK---RDAIADCISEILEGER 421 (464)
Q Consensus 356 vI~HgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~-----rl~~~~G~g~~l~--~~~---~~~l~~~i~~ll~~~~ 421 (464)
||..-|.-.+.+.++ .|+|+-++ |.+..+. .+.+- ++-+.+. ..+ +..|++.|.++|...
T Consensus 95 VIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~~- 168 (223)
T 3dfz_A 95 IVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDES- 168 (223)
T ss_dssp EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCTH-
T ss_pred EEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccHH-
Confidence 999888766655544 46665332 2222221 12222 3333333 222 466777777777442
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 012412 422 GKELRRNAGKWRKLAKEA 439 (464)
Q Consensus 422 ~~~~~~~a~~l~~~~~~~ 439 (464)
...+-+.+.++++.+++.
T Consensus 169 ~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 169 YTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 236777777777777753
No 94
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=68.67 E-value=35 Score=29.28 Aligned_cols=40 Identities=15% Similarity=0.224 Sum_probs=30.1
Q ss_pred cEEEEEcCCCccChHHHHHHH------HHHHhCC-CeEEEEeCcccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFS------RRLQHKG-IKVTLVTTRFFY 53 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la------~~L~~rG-h~V~~~~~~~~~ 53 (464)
.+.++++.|+.+.++.++.-+ ++|.+.| .+|++.+.....
T Consensus 28 ~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~ 74 (224)
T 2jzc_A 28 EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS 74 (224)
T ss_dssp SCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch
Confidence 456777777777788887766 8888888 788888876543
No 95
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=68.64 E-value=29 Score=28.27 Aligned_cols=141 Identities=14% Similarity=0.087 Sum_probs=78.9
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccce
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~v 356 (464)
+.|.|-|-+||.+ +....++....|+.++..+-+.+-+. ...|+.+.+. +-.. --..+++ +
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--HR~p~~l~~~------------~~~a-~~~g~~V--i 71 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA--HRMPDEMFDY------------AEKA-RERGLRA--I 71 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTSHHHHHHH------------HHHH-TTTTCSE--E
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc--ccCHHHHHHH------------HHHH-HhcCCeE--E
Confidence 5677999999877 67788899999999998877666554 3344433211 1110 0123344 6
Q ss_pred eccCCh----hHHHHHHHhCCcEeccCCccch---hhHHHHHHhH-hcceeeccCc------CHHHHHHHHHHHhcCCch
Q 012412 357 VTHCGW----NSTMEALSLGVPMVAMPQWSDQ---STNAKYILDV-WKTGLKFPIV------KRDAIADCISEILEGERG 422 (464)
Q Consensus 357 I~HgG~----~s~~eal~~GvP~v~~P~~~DQ---~~na~rl~~~-~G~g~~l~~~------~~~~l~~~i~~ll~~~~~ 422 (464)
|.=.|. .++.- -..-+|++.+|....- .+--.-+.++ -|+.+..-.. ++.-++..|- -+.|+
T Consensus 72 Ia~AG~aahLpgvvA-~~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~IL-a~~d~-- 147 (173)
T 4grd_A 72 IAGAGGAAHLPGMLA-AKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSIL-SGNSV-- 147 (173)
T ss_dssp EEEEESSCCHHHHHH-HHCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-TTSCH--
T ss_pred EEeccccccchhhhe-ecCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHH-cCCCH--
Confidence 654442 34443 3568999999975532 2222223333 1333322112 2223332221 13565
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 012412 423 KELRRNAGKWRKLAKEAVA 441 (464)
Q Consensus 423 ~~~~~~a~~l~~~~~~~~~ 441 (464)
+++++.++++++.++.+.
T Consensus 148 -~l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 148 -DYANRLAAFRVRQNEAAH 165 (173)
T ss_dssp -HHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHH
Confidence 899999988888876543
No 96
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=68.10 E-value=5.5 Score=35.91 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
||||+. |+.|.+-. .|++.|.++||+|+.++..
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEECC
Confidence 687765 44455543 5789999999999998753
No 97
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=67.94 E-value=4.3 Score=34.30 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=35.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCcccccccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~ 57 (464)
|||++.-.|+.|-+. ...+.+.|+++ |++|.++.++.....+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 588886666656554 89999999999 99999999988776665
No 98
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=67.54 E-value=5.1 Score=35.85 Aligned_cols=53 Identities=6% Similarity=0.114 Sum_probs=39.1
Q ss_pred cccccceeccCChhHHHHHHHh------CCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcC
Q 012412 350 HEATGCFVTHCGWNSTMEALSL------GVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 419 (464)
Q Consensus 350 ~~~~~~vI~HgG~~s~~eal~~------GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~ 419 (464)
.+|+ +|.=||-||+.+++.. ++|++.+|.. .+ | .+.+++++++.++++++++.
T Consensus 35 ~~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~l-g---fl~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 35 EPEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------HL-G---FYADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SCSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------SC-C---SSCCBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------CC-C---cCCcCCHHHHHHHHHHHHcC
Confidence 4577 9999999999999775 8999988741 12 2 12245678888888888865
No 99
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=67.33 E-value=17 Score=29.50 Aligned_cols=86 Identities=9% Similarity=0.014 Sum_probs=51.6
Q ss_pred CceEEEEecccccCC-HHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccce
Q 012412 278 ESVVYVSYGSFVELK-AEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~v 356 (464)
++.+|+...-+.... .+..+++...|++.|..+++ +......-...+ |--....+..||+-..
T Consensus 10 ~~~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~v~~--P~~~~~~~~~~i--------------~~~d~~~i~~aD~vVA 73 (161)
T 2f62_A 10 RKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLI--PTDNEATEALDI--------------RQKNIQMIKDCDAVIA 73 (161)
T ss_dssp CEEEEESGGGGSTTTTHHHHHHHHHHHHTTTCEEEC--TTTTCCSSHHHH--------------HHHHHHHHHHCSEEEE
T ss_pred hceEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEC--CCccCcchHHHH--------------HHHHHHHHHhCCEEEE
Confidence 446666554444556 78889999999988865432 211110000000 1123477888998322
Q ss_pred e-c-----cCChhHHHHH---HHhCCcEeccC
Q 012412 357 V-T-----HCGWNSTMEA---LSLGVPMVAMP 379 (464)
Q Consensus 357 I-~-----HgG~~s~~ea---l~~GvP~v~~P 379 (464)
+ + .--.||..|. .+.|+|++++-
T Consensus 74 ~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 74 DLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp ECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 3 2 2347899885 88999999964
No 100
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=66.79 E-value=6.5 Score=32.97 Aligned_cols=43 Identities=19% Similarity=0.125 Sum_probs=35.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
.||++.-.|+.|-+ -...+.+.|.++|++|.++.++.....+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 48998777776744 67899999999999999999988777666
No 101
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=65.20 E-value=5.2 Score=35.48 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=39.6
Q ss_pred cccccceeccCChhHHHHHHHh---CCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcC
Q 012412 350 HEATGCFVTHCGWNSTMEALSL---GVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 419 (464)
Q Consensus 350 ~~~~~~vI~HgG~~s~~eal~~---GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~ 419 (464)
.+|+ +|+-||-||+.+++.. ++|++.++. + .. | ... ++.++++.++++.+++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G----------~~-G--fl~-~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-G----------RL-G--FLT-SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-S----------SC-C--SSC-CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-C----------CC-C--ccC-cCCHHHHHHHHHHHHcC
Confidence 5688 9999999999999877 889888763 1 12 2 111 35688888888888866
No 102
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=64.37 E-value=48 Score=28.38 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=32.5
Q ss_pred CCcEEEEEcCC-CccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 12 KLAHCLVLTYP-GQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 12 ~~~~il~~~~~-~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.+-.+.+++.+ +.|=..-++.++..+..+|.+|.++.+..
T Consensus 10 ~~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 10 KIGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp -CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 34456666666 88999999999999999999999997654
No 103
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=63.84 E-value=7.3 Score=32.38 Aligned_cols=43 Identities=9% Similarity=0.061 Sum_probs=34.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
.||++.-.|+.|=+ -...+.+.|.++|++|.++.++...+.+.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 37887666665555 67899999999999999999988776665
No 104
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=62.81 E-value=56 Score=27.78 Aligned_cols=102 Identities=16% Similarity=0.179 Sum_probs=53.7
Q ss_pred hHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChH
Q 012412 266 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQL 345 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~ 345 (464)
.++-++|.++ ....|+-|... -.+....++..+.+.++|=+++... .+.+..+. ......+....+..
T Consensus 35 ~~lg~~LA~~---G~~vVsGGg~~----GiM~aa~~gAl~~GG~tiGVlP~~~---~~~e~~~~--~~~~~~~~~~f~~R 102 (215)
T 2a33_A 35 VDLGNELVSR---NIDLVYGGGSI----GLMGLVSQAVHDGGRHVIGIIPKTL---MPRELTGE--TVGEVRAVADMHQR 102 (215)
T ss_dssp HHHHHHHHHT---TCEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEESSC---C----------CCEEEEESSHHHH
T ss_pred HHHHHHHHHC---CCEEEECCChh----hHhHHHHHHHHHcCCcEEEEcchHh---cchhhccC--CCCceeecCCHHHH
Confidence 4445566653 25566655431 3455555655555666665554321 11121111 11234455666655
Q ss_pred -Hhh-ccccccceeccCChhHHHHHH---H------hCCcEeccCC
Q 012412 346 -EVL-AHEATGCFVTHCGWNSTMEAL---S------LGVPMVAMPQ 380 (464)
Q Consensus 346 -~ll-~~~~~~~vI~HgG~~s~~eal---~------~GvP~v~~P~ 380 (464)
.++ ..+++ .++--||+||+-|.. . +++|++++-.
T Consensus 103 k~~~~~~sda-~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 103 KAEMAKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHHTCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHHhCCE-EEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 333 34443 466789999997765 2 4899998764
No 105
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=62.53 E-value=14 Score=28.85 Aligned_cols=45 Identities=9% Similarity=-0.079 Sum_probs=33.7
Q ss_pred CcEEEE-EcCC--CccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 13 LAHCLV-LTYP--GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 13 ~~~il~-~~~~--~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
+.|++| ++.+ +.......+.+|...+..||+|+++........+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~ 62 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLD 62 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGB
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHh
Confidence 467775 5555 34667788889999999999999988876655544
No 106
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=62.26 E-value=20 Score=28.67 Aligned_cols=123 Identities=14% Similarity=0.136 Sum_probs=67.6
Q ss_pred eEEEEeccccc--CCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEE--EEec--c--ChHHhhccc
Q 012412 280 VVYVSYGSFVE--LKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSL--VVSW--C--PQLEVLAHE 351 (464)
Q Consensus 280 ~v~vs~Gs~~~--~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~--~~~~--~--p~~~ll~~~ 351 (464)
.||++ |++.. .....++++.+.|++.| .+ +...- .++++ .++.. ...| + -....+..|
T Consensus 4 kIYlA-GP~f~~~e~~~~~~~i~~~L~~~G-~V-l~~hv-----~~~~l------~~~g~~~~~~~~~i~~~d~~~i~~a 69 (152)
T 4fyk_A 4 SVYFC-GSIRGGREDQALYARIVSRLRRYG-KV-LTEHV-----ADAEL------EPLGEEAAGGDQFIHEQNLNWLQQA 69 (152)
T ss_dssp EEEEE-CCSTTCCTTHHHHHHHHHHHTTTS-EE-CCCC------------------------CCCHHHHHHHHHHHHHHC
T ss_pred eEEEE-CCCCCcHHHHHHHHHHHHHHHHcC-cc-ccccc-----Cchhh------hhccccccCCHHHHHHHHHHHHHHC
Confidence 58886 44443 34578899999999988 43 22110 11111 11111 0111 1 123667788
Q ss_pred ccccee---ccCChhHHHHH---HHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhcC
Q 012412 352 ATGCFV---THCGWNSTMEA---LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILEG 419 (464)
Q Consensus 352 ~~~~vI---~HgG~~s~~ea---l~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~~ 419 (464)
|+ || +....||..|. .+.|+|++++=-......-+..+... .-|-.+. ....++|.+.|.+.+.+
T Consensus 70 D~--vvA~l~~~d~Gt~~EiG~A~algkPV~~l~~~~~~~~ls~mi~G~-~~~~~~~~~~Y~~~el~~il~~f~~~ 142 (152)
T 4fyk_A 70 DV--VVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGA-ADGSRFQVWDYAEGEVETMLDRYFEA 142 (152)
T ss_dssp SE--EEEECSSCCHHHHHHHHHHHHTTCCEEEEECGGGSCCCCHHHHHH-CCSSSEEEEECCTTCHHHHHHHHHC-
T ss_pred CE--EEEeCCCCCCCHHHHHHHHHHcCCeEEEEEeCCccchhHHHHcCC-CCCCeEEEEEecHHHHHHHHHHHHHh
Confidence 88 66 44568998884 88999999864322222334445444 3222333 33348888888888765
No 107
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=61.91 E-value=17 Score=33.60 Aligned_cols=100 Identities=9% Similarity=-0.005 Sum_probs=55.5
Q ss_pred EEEEEcCCCcc--C--hHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 15 HCLVLTYPGQG--H--INPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 15 ~il~~~~~~~G--H--~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
.|++.+..+.. . ...+..|++.|.++|++|.+++.+...+..++.....+-....+. ...+
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~---------g~~s------ 251 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVAT---------GKFQ------ 251 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECT---------TCCC------
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEee---------CCCC------
Confidence 45566665432 2 346899999999999999987776554433311000000111111 1111
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecch
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~~ 144 (464)
+.++..-+.. .|++|+... ...++|..+|+|+|.++..+
T Consensus 252 ---------l~e~~ali~~----a~~~i~~Ds--G~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 252 ---------LGPLAAAMNR----CNLLITNDS--GPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp ---------HHHHHHHHHT----CSEEEEESS--HHHHHHHTTTCCEEEECSSC
T ss_pred ---------HHHHHHHHHh----CCEEEECCC--CHHHHHHhcCCCEEEEECCC
Confidence 2233333322 489998522 35667888999999875433
No 108
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=61.78 E-value=27 Score=29.55 Aligned_cols=49 Identities=14% Similarity=0.019 Sum_probs=36.1
Q ss_pred hhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEE
Q 012412 265 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWV 313 (464)
Q Consensus 265 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 313 (464)
.+-+.+|+.+..++.++||..++......+....+.++++++|..+.++
T Consensus 15 ~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 15 VPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3455677754456779999888765445678889999999999976544
No 109
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=61.44 E-value=43 Score=28.91 Aligned_cols=34 Identities=12% Similarity=0.111 Sum_probs=28.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+|||.|+-.|..|- .||+.|+++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 457999999888774 5889999999999987764
No 110
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=60.82 E-value=22 Score=32.83 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+++++.++.| + =.++|+.|+++|++|.++....
T Consensus 46 k~vlVTGas~G-I--G~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 46 CTVFITGASRG-I--GKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHTTTCEEEEEESCC
T ss_pred CEEEEeCCChH-H--HHHHHHHHHHCCCEEEEEECCh
Confidence 67777777653 2 2578999999999999987643
No 111
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=60.55 E-value=57 Score=25.26 Aligned_cols=108 Identities=10% Similarity=0.043 Sum_probs=60.1
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc-ChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC-PQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~-p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
..++.....+...|+..++.+....... +.+ ..+.+ ....+.+.++- |. -.|. .+.+.
T Consensus 10 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~a~-~~l~~---~~~dliild~~l~~--------------~~g~-~~~~~ 68 (155)
T 1qkk_A 10 DDDRDLRKAMQQTLELAGFTVSSFASAT--EAL-AGLSA---DFAGIVISDIRMPG--------------MDGL-ALFRK 68 (155)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEESCHH--HHH-HTCCT---TCCSEEEEESCCSS--------------SCHH-HHHHH
T ss_pred eCCHHHHHHHHHHHHHcCcEEEEECCHH--HHH-HHHHh---CCCCEEEEeCCCCC--------------CCHH-HHHHH
Confidence 4466777778888888888765332211 100 00000 22344444431 11 0122 22222
Q ss_pred H---HhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcCC
Q 012412 369 L---SLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 420 (464)
Q Consensus 369 l---~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~~ 420 (464)
+ ...+|+|++--..+ ........+. |+--.+. .++.+.|..+|++++...
T Consensus 69 l~~~~~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 69 ILALDPDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAKPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp HHHHCTTSCEEEEECGGG-HHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHhhCCCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeCCCCHHHHHHHHHHHHHHH
Confidence 2 34788888764443 3444555667 7766666 889999999999998653
No 112
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=60.43 E-value=28 Score=30.02 Aligned_cols=110 Identities=10% Similarity=-0.015 Sum_probs=56.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHH
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAY 88 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 88 (464)
.+++||+|+..++. .-+.++.++|.+. +++|..+.+........+.....|+.+..++.. .+.. -.
T Consensus 20 ~~~~rI~~l~SG~g---~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~----~~~~---r~-- 87 (229)
T 3auf_A 20 GHMIRIGVLISGSG---TNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPA----AYPS---RT-- 87 (229)
T ss_dssp TTCEEEEEEESSCC---HHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGG----GSSS---HH--
T ss_pred CCCcEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcc----cccc---hh--
Confidence 45679998866653 2367778888776 678766654321111110011457777665421 0111 00
Q ss_pred HHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch-hhHHHHHHHcCCccEEEecc
Q 012412 89 LERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (464)
. ....+.+.++++ .+ |+||+-.+. .....+-..+...++-+.++
T Consensus 88 --~----~~~~~~~~l~~~----~~-Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 88 --A----FDAALAERLQAY----GV-DLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --H----HHHHHHHHHHHT----TC-SEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --h----ccHHHHHHHHhc----CC-CEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 111222333332 44 999987664 43444555566666766444
No 113
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=60.13 E-value=57 Score=27.15 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=58.5
Q ss_pred hhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh
Q 012412 265 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ 344 (464)
Q Consensus 265 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~ 344 (464)
..++-++|.++ ....|+-|... -.+....++..+.+-.++=+.+.... ..+..+. ...+..+.+..+.
T Consensus 22 A~~lg~~La~~---g~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~l~---~~e~~~~--~~~~~~~~~~~~~ 89 (191)
T 1t35_A 22 AAELGVYMAEQ---GIGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSGLF---SGEVVHQ--NLTELIEVNGMHE 89 (191)
T ss_dssp HHHHHHHHHHT---TCEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETTCC---HHHHTTC--CCSEEEEESHHHH
T ss_pred HHHHHHHHHHC---CCEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCchhc---ccccccC--CCCccccCCCHHH
Confidence 35555667653 25666665432 35666677666667776666544211 1111111 1234455666665
Q ss_pred H-H-hhccccccceeccCChhHHHH---HH------HhCCcEeccCC
Q 012412 345 L-E-VLAHEATGCFVTHCGWNSTME---AL------SLGVPMVAMPQ 380 (464)
Q Consensus 345 ~-~-ll~~~~~~~vI~HgG~~s~~e---al------~~GvP~v~~P~ 380 (464)
. . +...++ ..++--||+||+-| ++ .+++|++++-.
T Consensus 90 Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 90 RKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 5 3 334444 45677899999855 56 38999999864
No 114
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=60.12 E-value=34 Score=32.16 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+++|||++..+.. .+.+++++++.|++|.++..+
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 4578999877753 367999999999999999764
No 115
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=60.06 E-value=25 Score=27.40 Aligned_cols=108 Identities=10% Similarity=0.090 Sum_probs=58.0
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc-ChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC-PQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~-p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
..++.....+...|+..++.++...... +.+ ..+.+ .+..+.+.++- |.. .|. .+.+.
T Consensus 14 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~a~-~~l~~---~~~dlvi~d~~l~~~--------------~g~-~~~~~ 72 (154)
T 2rjn_A 14 DDEQPILNSLKRLIKRLGCNIITFTSPL--DAL-EALKG---TSVQLVISDMRMPEM--------------GGE-VFLEQ 72 (154)
T ss_dssp CSCHHHHHHHHHHHHTTTCEEEEESCHH--HHH-HHHTT---SCCSEEEEESSCSSS--------------CHH-HHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEeCCHH--HHH-HHHhc---CCCCEEEEecCCCCC--------------CHH-HHHHH
Confidence 4467777778888888888765332111 101 11111 22344444431 111 122 22222
Q ss_pred H---HhCCcEeccCCccchhhHHHHHHhHhc-ceeecc-CcCHHHHHHHHHHHhcCC
Q 012412 369 L---SLGVPMVAMPQWSDQSTNAKYILDVWK-TGLKFP-IVKRDAIADCISEILEGE 420 (464)
Q Consensus 369 l---~~GvP~v~~P~~~DQ~~na~rl~~~~G-~g~~l~-~~~~~~l~~~i~~ll~~~ 420 (464)
+ ...+|+|++--..+ ........+. | +--.+. .++.+.|..+|++++...
T Consensus 73 l~~~~~~~~ii~ls~~~~-~~~~~~~~~~-g~~~~~l~kP~~~~~L~~~i~~~~~~~ 127 (154)
T 2rjn_A 73 VAKSYPDIERVVISGYAD-AQATIDAVNR-GKISRFLLKPWEDEDVFKVVEKGLQLA 127 (154)
T ss_dssp HHHHCTTSEEEEEECGGG-HHHHHHHHHT-TCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEecCCC-HHHHHHHHhc-cchheeeeCCCCHHHHHHHHHHHHHHH
Confidence 3 24788887754444 3334444445 5 544455 889999999999998653
No 116
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=58.86 E-value=11 Score=32.05 Aligned_cols=45 Identities=13% Similarity=0.002 Sum_probs=38.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
+..+|++.+.++-.|-....-++..|.++|++|.++......+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 355899999999999999999999999999999999876544443
No 117
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=58.80 E-value=41 Score=30.65 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=27.5
Q ss_pred EEEEEcCCCcc---Ch--HHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 15 HCLVLTYPGQG---HI--NPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 15 ~il~~~~~~~G---H~--~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
.|++.+....+ .+ .-+..+++.|.++|++|.++..+...+
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~ 226 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHE 226 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHH
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHH
Confidence 45566655222 23 378899999999999999887765443
No 118
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=57.84 E-value=78 Score=26.01 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=77.3
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccce
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~v 356 (464)
.-|.|-|-+||.+ +....++....|+.++..+-+.+-+. ...|+.+.+. +...+ =..+++ +
T Consensus 12 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--HR~p~~l~~~------------~~~a~-~~g~~V--i 72 (183)
T 1o4v_A 12 HVPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA--HRTPDRMFEY------------AKNAE-ERGIEV--I 72 (183)
T ss_dssp --CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT--TTCHHHHHHH------------HHHTT-TTTCCE--E
T ss_pred CCCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--cCCHHHHHHH------------HHHHH-hCCCcE--E
Confidence 4568999999877 67888899999999999877666554 3334433211 00000 012445 7
Q ss_pred eccCCh----hHHHHHHHhCCcEeccCCccch-hhHHHHHHhH-h--ccee--e-cc-CcCHHHHHHHHHHHhcCCchHH
Q 012412 357 VTHCGW----NSTMEALSLGVPMVAMPQWSDQ-STNAKYILDV-W--KTGL--K-FP-IVKRDAIADCISEILEGERGKE 424 (464)
Q Consensus 357 I~HgG~----~s~~eal~~GvP~v~~P~~~DQ-~~na~rl~~~-~--G~g~--~-l~-~~~~~~l~~~i~~ll~~~~~~~ 424 (464)
|.=.|. .++.-++ .-+|++.+|..... ......+.-. + |+.+ . ++ .+++.-++..|- -+.|+ +
T Consensus 73 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIl-a~~d~---~ 147 (183)
T 1o4v_A 73 IAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASIL-GIKYP---E 147 (183)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHH-HTTCH---H
T ss_pred EEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHH-hcCCH---H
Confidence 765553 3444444 77899999975421 1122222222 1 3221 1 12 344555554443 34565 7
Q ss_pred HHHHHHHHHHHHHHH
Q 012412 425 LRRNAGKWRKLAKEA 439 (464)
Q Consensus 425 ~~~~a~~l~~~~~~~ 439 (464)
++++.+..++..++.
T Consensus 148 l~~kL~~~r~~~~~~ 162 (183)
T 1o4v_A 148 IARKVKEYKERMKRE 162 (183)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888777765
No 119
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=57.47 E-value=23 Score=30.63 Aligned_cols=27 Identities=30% Similarity=0.381 Sum_probs=21.4
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 24 QGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 24 ~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
.|.+ =.++|++|.++|++|++++.+..
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~~ 54 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKRA 54 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTTS
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCcc
Confidence 4543 35689999999999999998753
No 120
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=57.31 E-value=11 Score=32.01 Aligned_cols=43 Identities=9% Similarity=-0.082 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCccChHH-HHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 13 LAHCLVLTYPGQGHINP-LLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p-~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
.+||++.-.|+ +...- ...+.+.|+++|++|.++.++.....+
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 45898755555 44554 789999999999999999997665433
No 121
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=56.30 E-value=11 Score=28.32 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=27.6
Q ss_pred CCCCCCCCCCcEEEEEcCCCccChHHHH-HHHHHHHhCCCe-EEE
Q 012412 4 NGKKPTSCKLAHCLVLTYPGQGHINPLL-QFSRRLQHKGIK-VTL 46 (464)
Q Consensus 4 ~~~~~~~~~~~~il~~~~~~~GH~~p~l-~la~~L~~rGh~-V~~ 46 (464)
.|+.+....++||++++..|.|.-.-.. .+-+.+.++|.+ +.+
T Consensus 9 ~~~~~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i 53 (110)
T 3czc_A 9 GGQQMGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIES 53 (110)
T ss_dssp ---------CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred ccccccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 4555566667899999999998888777 677778888987 543
No 122
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=55.82 E-value=82 Score=25.65 Aligned_cols=139 Identities=12% Similarity=0.053 Sum_probs=77.8
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccce
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~v 356 (464)
.+|.|-|-+||.+ +....++....|+.++..+-+.+-+. ...|+.+.+ |+-.. --..+++ +
T Consensus 6 ~~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa--HR~p~~~~~------------~~~~a-~~~g~~V--i 66 (174)
T 3lp6_A 6 ERPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA--HRTPEAMFS------------YARGA-AARGLEV--I 66 (174)
T ss_dssp CCCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHHHH------------HHHHH-HHHTCCE--E
T ss_pred CCCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC--CCCHHHHHH------------HHHHH-HhCCCCE--E
Confidence 3456778888876 67888899999999998877666554 334443321 11000 0123455 7
Q ss_pred eccCCh----hHHHHHHHhCCcEeccCCccchh-hHHHHH--HhH-hccee--ec-c-CcCHHHHHHHHHHHhcCCchHH
Q 012412 357 VTHCGW----NSTMEALSLGVPMVAMPQWSDQS-TNAKYI--LDV-WKTGL--KF-P-IVKRDAIADCISEILEGERGKE 424 (464)
Q Consensus 357 I~HgG~----~s~~eal~~GvP~v~~P~~~DQ~-~na~rl--~~~-~G~g~--~l-~-~~~~~~l~~~i~~ll~~~~~~~ 424 (464)
|.=.|. .++.-+ ..-+|++.+|...-.. .....+ .++ -|+.+ .. + .+++.-++..|-. +.|+ +
T Consensus 67 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~-~~d~---~ 141 (174)
T 3lp6_A 67 IAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLG-AANP---Q 141 (174)
T ss_dssp EEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHH-TTCH---H
T ss_pred EEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHh-CCCH---H
Confidence 765553 344444 4679999999763222 122222 222 13222 11 1 3344444433322 3454 8
Q ss_pred HHHHHHHHHHHHHHH
Q 012412 425 LRRNAGKWRKLAKEA 439 (464)
Q Consensus 425 ~~~~a~~l~~~~~~~ 439 (464)
++++.+.+++..++.
T Consensus 142 l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 142 LRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899998888888764
No 123
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=55.76 E-value=20 Score=26.81 Aligned_cols=44 Identities=7% Similarity=-0.044 Sum_probs=32.5
Q ss_pred cEEEE-EcCCCc--cChHHHHHHHHHHHhC-CC-eEEEEeCcccccccc
Q 012412 14 AHCLV-LTYPGQ--GHINPLLQFSRRLQHK-GI-KVTLVTTRFFYKSLH 57 (464)
Q Consensus 14 ~~il~-~~~~~~--GH~~p~l~la~~L~~r-Gh-~V~~~~~~~~~~~~~ 57 (464)
+|++| ++.+.+ ......+.+|..+.+. || +|.++..........
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGB
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHh
Confidence 46764 555533 4456779999999999 99 999998877766665
No 124
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=55.49 E-value=62 Score=24.41 Aligned_cols=108 Identities=11% Similarity=0.079 Sum_probs=59.9
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc-ChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC-PQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~-p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
..++.....+...|++.++.+....... +.+ +.+.+ .+..+.+.++- |.. .|. .+.+.
T Consensus 13 dd~~~~~~~l~~~l~~~g~~v~~~~~~~--~a~-~~l~~---~~~dlvi~d~~l~~~--------------~g~-~~~~~ 71 (140)
T 3grc_A 13 EDDPDIARLLNLMLEKGGFDSDMVHSAA--QAL-EQVAR---RPYAAMTVDLNLPDQ--------------DGV-SLIRA 71 (140)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEECSHH--HHH-HHHHH---SCCSEEEECSCCSSS--------------CHH-HHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCeEEEECCHH--HHH-HHHHh---CCCCEEEEeCCCCCC--------------CHH-HHHHH
Confidence 4566777778888888888754332221 111 11111 23344444431 111 122 23333
Q ss_pred HH-----hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 369 LS-----LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 369 l~-----~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
+. ..+|++++--..+...-.....+. |+--.+. .++.++|..+|++++..
T Consensus 72 l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~-g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 72 LRRDSRTRDLAIVVVSANAREGELEFNSQPL-AVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp HHTSGGGTTCEEEEECTTHHHHHHHHCCTTT-CCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred HHhCcccCCCCEEEEecCCChHHHHHHhhhc-CCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 33 478888876544443333244556 6655566 88999999999999865
No 125
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=55.43 E-value=36 Score=26.17 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=32.7
Q ss_pred cEEE-EEcCCCccC--hHHHHHHHHHHHhCCCeE-EEEeCcccccccc
Q 012412 14 AHCL-VLTYPGQGH--INPLLQFSRRLQHKGIKV-TLVTTRFFYKSLH 57 (464)
Q Consensus 14 ~~il-~~~~~~~GH--~~p~l~la~~L~~rGh~V-~~~~~~~~~~~~~ 57 (464)
||++ +++.+.+|+ ....+.+|.++.+.||+| .++..........
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~~ 48 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNST 48 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHHh
Confidence 4666 466666654 457788999999999999 8888876665555
No 126
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=55.30 E-value=44 Score=26.25 Aligned_cols=45 Identities=20% Similarity=0.191 Sum_probs=33.1
Q ss_pred CcEEE-EEcCCCccChHH--HHHHHHHHHhCCCeE-EEEeCcccccccc
Q 012412 13 LAHCL-VLTYPGQGHINP--LLQFSRRLQHKGIKV-TLVTTRFFYKSLH 57 (464)
Q Consensus 13 ~~~il-~~~~~~~GH~~p--~l~la~~L~~rGh~V-~~~~~~~~~~~~~ 57 (464)
.||++ +++.+.+|+-.. .+.+|.++.+.||+| .++......-...
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a~ 60 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNAN 60 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHHh
Confidence 56887 477777776554 467799999999999 8877766555554
No 127
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=54.72 E-value=49 Score=30.06 Aligned_cols=37 Identities=19% Similarity=0.218 Sum_probs=21.1
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCC--CeEEEEeC
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKG--IKVTLVTT 49 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rG--h~V~~~~~ 49 (464)
..+++|+||+.- +.|.+- ..|+++|.++| ++|+.+..
T Consensus 20 ~~~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 20 FQSNAMNILVTG--GAGFIG--SNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp ----CEEEEEET--TTSHHH--HHHHHHHHHHCTTEEEEEEEC
T ss_pred cccCCCeEEEEC--CccHHH--HHHHHHHHhhCCCcEEEEEec
Confidence 345567777653 334444 36789999999 55555543
No 128
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=54.67 E-value=41 Score=29.20 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=24.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 8 k~~lVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 8 RVFIVTGASSG-L--GAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56666666542 2 257899999999999888754
No 129
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=54.63 E-value=32 Score=31.11 Aligned_cols=80 Identities=9% Similarity=0.088 Sum_probs=48.2
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceecc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTH 359 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~H 359 (464)
.|.++--+......+.+..+...|++.+..+.+....... ...++.. ++....++ +|.-
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~--~a~~~~~-----------------~~~~~~d~--vv~~ 70 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQG--DATKYCQ-----------------EFASKVDL--IIVF 70 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTT--HHHHHHH-----------------HHTTTCSE--EEEE
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcc--hHHHHHH-----------------HhhcCCCE--EEEE
Confidence 4555554433323466777888888777776555422110 0111110 11234567 9999
Q ss_pred CChhHHHHHHH------hCCcEeccCC
Q 012412 360 CGWNSTMEALS------LGVPMVAMPQ 380 (464)
Q Consensus 360 gG~~s~~eal~------~GvP~v~~P~ 380 (464)
||-||+.|++. .++|+.++|.
T Consensus 71 GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 71 GGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp ECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred ccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 99999999864 5789999996
No 130
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.60 E-value=7.5 Score=30.40 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+++||+++-. |.+ -..+++.|.++||+|+++....
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 3457888754 433 3578999999999999987643
No 131
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=54.19 E-value=8.1 Score=35.23 Aligned_cols=56 Identities=11% Similarity=0.184 Sum_probs=36.7
Q ss_pred hhccccccceeccCChhHHHHHHHh----CCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcC
Q 012412 347 VLAHEATGCFVTHCGWNSTMEALSL----GVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEG 419 (464)
Q Consensus 347 ll~~~~~~~vI~HgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~ 419 (464)
....+|+ +|.-||-||+.+++.. ++|++.++.. .+ | . +.++.++++.++++.+++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G-----------~~-g--f-l~~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLG-----------RI-G--F-LAEAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECS-----------SC-C--S-SCSEEGGGHHHHHHHHHHT
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCC-----------CC-c--c-CcccCHHHHHHHHHHHHcC
Confidence 4456788 9999999999999754 8999988731 12 2 1 1133467777777777754
No 132
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=53.96 E-value=48 Score=32.17 Aligned_cols=96 Identities=13% Similarity=0.242 Sum_probs=53.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEcc--CCCCCCCCC-CccCH-HHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS--DGYDEGGYA-QAESI-EAYL 89 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~-~~~~~-~~~~ 89 (464)
+|-+|++. .+=.-++.+|+.|.+.|.+|. ++..-.+.+. ..|+.+..+. .++++ -++ ..+++ ....
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~----e~GI~v~~V~~vTgfPE-il~GRVKTLHP~ih 79 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIA----DTGIPVTPVEQLTGFPE-VLDGRVKTLHPRVH 79 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHH----TTTCCCEEHHHHHSCCC-CTTTTSSSCSHHHH
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHH----HcCCceeeccccCCCch-hhCCccccCCchhh
Confidence 34444444 244558899999999999875 5556667777 6788888774 23443 111 11221 1222
Q ss_pred HHHHH--hCcHHHHHHHHHhcCCCCCccEEEeCCc
Q 012412 90 ERFWQ--IGPQTLTELVEKMNGSDSPVDCIVYDSI 122 (464)
Q Consensus 90 ~~~~~--~~~~~l~~~~~~l~~~~~p~DlVI~D~~ 122 (464)
.-++. .....++++ ++..- .|+|+||++.+
T Consensus 80 gGiLa~r~~~~h~~~l-~~~~i--~~iDlVvvNLY 111 (523)
T 3zzm_A 80 AGLLADLRKSEHAAAL-EQLGI--EAFELVVVNLY 111 (523)
T ss_dssp HHHHCCTTSHHHHHHH-HHHTC--CCCSEEEEECC
T ss_pred hhhccCCCCHHHHHHH-HHCCC--CceeEEEEeCC
Confidence 22222 222233333 33322 57899999943
No 133
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=53.43 E-value=98 Score=25.81 Aligned_cols=97 Identities=12% Similarity=0.094 Sum_probs=55.6
Q ss_pred hhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEE--ecc
Q 012412 265 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVV--SWC 342 (464)
Q Consensus 265 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~--~~~ 342 (464)
..++-++|.++ + ..+|+-|.. -.+....++..+.+-.++-+++.. +. .. ......+. ...
T Consensus 47 A~~lg~~LA~~-G--~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e-~~--~~-------~~~~~~~~~~~~f 108 (195)
T 1rcu_A 47 CLELGRTLAKK-G--YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDE-EA--GN-------PYLSVAVKTGLDF 108 (195)
T ss_dssp HHHHHHHHHHT-T--CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTT-CC--CC-------TTCSEEEECCCCH
T ss_pred HHHHHHHHHHC-C--CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCc-cc--CC-------CCcceeeecCCCH
Confidence 35566677763 2 455553332 456666666655666777666542 11 11 11334444 334
Q ss_pred ChH--HhhccccccceeccCChhHHH---HHHHhCCcEeccCC
Q 012412 343 PQL--EVLAHEATGCFVTHCGWNSTM---EALSLGVPMVAMPQ 380 (464)
Q Consensus 343 p~~--~ll~~~~~~~vI~HgG~~s~~---eal~~GvP~v~~P~ 380 (464)
+.. .+...+++ .++--||+||+. |++.+|+|+++++.
T Consensus 109 ~~Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 109 QMRSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 533 44445554 456678899875 56889999999973
No 134
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=53.40 E-value=93 Score=26.05 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=54.6
Q ss_pred hHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcc-cCcCChhhhhhccCCCcEEEEeccCh
Q 012412 266 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSLVVSWCPQ 344 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~~p~ 344 (464)
.++-++|.++. ...|+-|... -.+....++..+.+-+++=+.+... ....+.. .-+...+++....
T Consensus 43 ~~lg~~La~~g---~~lV~GGG~~----GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~------~~~~~i~~~~~~~ 109 (199)
T 3qua_A 43 AEVGSSIAARG---WTLVSGGGNV----SAMGAVAQAARAKGGHTVGVIPKALVHRELADV------DAAELIVTDTMRE 109 (199)
T ss_dssp HHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCT------TSSEEEEESSHHH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEeCchhhhccccCC------CCCeeEEcCCHHH
Confidence 44555666532 3455554322 3566666666666666665554321 1111111 1134555565543
Q ss_pred H--HhhccccccceeccCChhHHHHHH---H------hCCcEeccC
Q 012412 345 L--EVLAHEATGCFVTHCGWNSTMEAL---S------LGVPMVAMP 379 (464)
Q Consensus 345 ~--~ll~~~~~~~vI~HgG~~s~~eal---~------~GvP~v~~P 379 (464)
. .+...+|+ .++--||+||+-|.. . +++|++++-
T Consensus 110 Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 110 RKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp HHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 3 44456665 356678899997763 3 599999875
No 135
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=53.26 E-value=17 Score=33.69 Aligned_cols=43 Identities=23% Similarity=0.287 Sum_probs=26.3
Q ss_pred CCCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCcc
Q 012412 5 GKKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRF 51 (464)
Q Consensus 5 ~~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~ 51 (464)
.++|..+.+++||+.- +.|.+- ..|+++|.++ ||+|+.+....
T Consensus 16 ~~~~~~m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 16 TQGPGSMKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp -------CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred hcCCcccCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 3445667778888753 334444 4678899988 99999998643
No 136
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=52.91 E-value=17 Score=31.00 Aligned_cols=46 Identities=9% Similarity=0.069 Sum_probs=38.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
.+..||++.+.++-.|-....-++..|..+|++|.+++.....+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 3457999999999999999999999999999999999876555444
No 137
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=52.83 E-value=17 Score=27.89 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.|||+++- .|.+-. .+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG---~G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAG---IGRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEEC---CSHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC---CCHHHH--HHHHHHHhCCCeEEEEECC
Confidence 46898883 355544 5789999999999998764
No 138
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=52.81 E-value=11 Score=34.44 Aligned_cols=24 Identities=8% Similarity=-0.097 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeCccc
Q 012412 29 PLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 29 p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
.=.++|+++.++|++|++++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 556789999999999999998654
No 139
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=52.70 E-value=95 Score=25.46 Aligned_cols=139 Identities=17% Similarity=0.139 Sum_probs=78.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhcccccccee
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 357 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI 357 (464)
.+.|-|-+||.+ +....++....|+.++..+-+.+-+. ...++.+.+. +.+.. -..+++ +|
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--HR~p~~l~~~------------~~~a~-~~g~~V--iI 81 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA--HRTPDRLADY------------ARTAA-ERGLNV--II 81 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHHHHH------------HHHTT-TTTCCE--EE
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--cCCHHHHHHH------------HHHHH-hCCCcE--EE
Confidence 456888888876 67888899999999998877666554 3334433211 00000 012445 77
Q ss_pred ccCCh----hHHHHHHHhCCcEeccCCccchh-hHH--HHHHhH-hcceee-cc-C----cCHHHHHHHHHHHhcCCchH
Q 012412 358 THCGW----NSTMEALSLGVPMVAMPQWSDQS-TNA--KYILDV-WKTGLK-FP-I----VKRDAIADCISEILEGERGK 423 (464)
Q Consensus 358 ~HgG~----~s~~eal~~GvP~v~~P~~~DQ~-~na--~rl~~~-~G~g~~-l~-~----~~~~~l~~~i~~ll~~~~~~ 423 (464)
.=.|. .++.-++ .-+|++.+|...... ... .-..++ -|+.+. +. + +++.-++..|- -+.|+
T Consensus 82 a~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~--- 156 (182)
T 1u11_A 82 AGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASIL-ALYNP--- 156 (182)
T ss_dssp EEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-GGGCH---
T ss_pred EecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHH-ccCCH---
Confidence 65553 3444444 589999999754211 111 122331 044421 11 2 44445554443 24565
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012412 424 ELRRNAGKWRKLAKEAV 440 (464)
Q Consensus 424 ~~~~~a~~l~~~~~~~~ 440 (464)
.++++.+.+++..++.+
T Consensus 157 ~l~~kL~~~r~~~~~~v 173 (182)
T 1u11_A 157 ALAARLETWRALQTASV 173 (182)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999998888653
No 140
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=52.67 E-value=95 Score=25.42 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=78.9
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhcccccccee
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 357 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI 357 (464)
+|.|-|-+||.+ +-..+++....|++++..+-+.+-+. ...|+.+.+. +-..+ -....+ +|
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA--HRtp~~l~~~------------~~~a~-~~g~~V--iI 82 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--HRTPDYMFEY------------AETAR-ERGLKV--II 82 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTSHHHHHHH------------HHHTT-TTTCCE--EE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc--ccChHHHHHH------------HHHHH-hcCceE--EE
Confidence 567989999877 66788999999999998877777665 2334433211 10000 112334 66
Q ss_pred ccCCh----hHHHHHHHhCCcEeccCCcc---chhhHHHHHHhHhcceeecc--CcC------HHHHHHHHHHHh--cCC
Q 012412 358 THCGW----NSTMEALSLGVPMVAMPQWS---DQSTNAKYILDVWKTGLKFP--IVK------RDAIADCISEIL--EGE 420 (464)
Q Consensus 358 ~HgG~----~s~~eal~~GvP~v~~P~~~---DQ~~na~rl~~~~G~g~~l~--~~~------~~~l~~~i~~ll--~~~ 420 (464)
.=.|. .++. |-..-+|++.+|... +-.+.-.-..++ =.|+-+- ..+ +.-++ .++| .|+
T Consensus 83 a~AG~aahLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVaTvaig~~ga~NAallA---~qILa~~d~ 157 (181)
T 4b4k_A 83 AGAGGAAHLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVATVAIGKAGSTNAGLLA---AQILGSFHD 157 (181)
T ss_dssp EEECSSCCHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCEECCSSHHHHHHHHHHH---HHHHTTTCH
T ss_pred EeccccccchhhH-HhcCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceEEEecCCccHHHHHHHH---HHHHccCCH
Confidence 55443 2333 335678999999854 333444444444 3444332 222 22222 2334 454
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 012412 421 RGKELRRNAGKWRKLAKEAVA 441 (464)
Q Consensus 421 ~~~~~~~~a~~l~~~~~~~~~ 441 (464)
+++++.+.+++.+++.+.
T Consensus 158 ---~l~~kl~~~r~~~~~~v~ 175 (181)
T 4b4k_A 158 ---DIHDALELRREAIEKDVR 175 (181)
T ss_dssp ---HHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHH
Confidence 888888888888776543
No 141
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=52.64 E-value=41 Score=29.43 Aligned_cols=33 Identities=18% Similarity=0.387 Sum_probs=24.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| +- .++|+.|+++|++|.++...
T Consensus 12 k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 12 KVVVISGVGPA-LG--TTLARRCAEQGADLVLAART 44 (264)
T ss_dssp CEEEEESCCTT-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCcH-HH--HHHHHHHHHCcCEEEEEeCC
Confidence 55666666543 32 57899999999999888754
No 142
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=52.60 E-value=16 Score=29.05 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=26.2
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
....++|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 16 ~~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 16 KQKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp -CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 345678998843 4443 45788999999999998764
No 143
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=52.57 E-value=26 Score=33.72 Aligned_cols=42 Identities=17% Similarity=0.160 Sum_probs=35.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccccc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSL 56 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~ 56 (464)
=+++...|+.|-..-++.+|...+.+|..|.|++.+...+.+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 367788889999999999999999899999999998665544
No 144
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=52.40 E-value=20 Score=28.24 Aligned_cols=38 Identities=18% Similarity=0.159 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY 53 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~ 53 (464)
..+++++..|. =+.|++++++.|.++|.+|+++ .....
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~ 55 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFE 55 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEG
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 45788877665 4899999999999999999998 54433
No 145
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=52.29 E-value=21 Score=34.17 Aligned_cols=26 Identities=8% Similarity=0.164 Sum_probs=19.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGI 42 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh 42 (464)
.+||||++-.+++ -.+||+.|++.+.
T Consensus 2 ~~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CCcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 4689999977754 4578999988875
No 146
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=52.20 E-value=1.3e+02 Score=27.39 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=25.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHh--CCCeEEEEeCc
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQH--KGIKVTLVTTR 50 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~--rGh~V~~~~~~ 50 (464)
..++++||+.- +.|-+- ..|++.|.+ +||+|+.+...
T Consensus 7 ~~~~~~vlVTG--atG~IG--~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 7 ELENQTILITG--GAGFVG--SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CCTTCEEEEET--TTSHHH--HHHHHHHHHHCTTSEEEEEECC
T ss_pred hcCCCEEEEEC--CCCHHH--HHHHHHHHhhCCCCeEEEEECC
Confidence 34556777653 334333 367889999 99999999764
No 147
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=52.20 E-value=11 Score=29.94 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
..||+++- .|++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 34788873 35554 67899999999999999874
No 148
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=52.11 E-value=9.9 Score=32.94 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=32.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|||.|..-||-|=..-...||..|+++|++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 57888767777999999999999999999999987654
No 149
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=51.93 E-value=15 Score=32.42 Aligned_cols=46 Identities=15% Similarity=0.110 Sum_probs=36.1
Q ss_pred CCCCCcEEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 9 TSCKLAHCLVLTYP---GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 9 ~~~~~~~il~~~~~---~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
-.+..||.+|++.+ +-|--.-.-.|+..|..||++|+..=-+.+..
T Consensus 18 ~~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 18 LYFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp ---CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 34567899999987 44777889999999999999999988766553
No 150
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=51.35 E-value=98 Score=25.19 Aligned_cols=142 Identities=17% Similarity=0.142 Sum_probs=78.0
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhcccccccee
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 357 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI 357 (464)
++.|-|-+||.+ +....++....|+.++..+-+.+-+. ...|+.+.+. +.. .--..+++ +|
T Consensus 12 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa--HR~p~~~~~~------------~~~-a~~~g~~V--iI 72 (174)
T 3kuu_A 12 GVKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA--HRTPDRLFSF------------AEQ-AEANGLHV--II 72 (174)
T ss_dssp CCCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHHHHH------------HHH-TTTTTCSE--EE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--cCCHHHHHHH------------HHH-HHhCCCcE--EE
Confidence 345777788876 67888899999999998877666554 3344433211 000 00023455 77
Q ss_pred ccCCh----hHHHHHHHhCCcEeccCCccc-hhhHHHHH--HhH-hcceeeccCc------CHHHHHHHHHHHhcCCchH
Q 012412 358 THCGW----NSTMEALSLGVPMVAMPQWSD-QSTNAKYI--LDV-WKTGLKFPIV------KRDAIADCISEILEGERGK 423 (464)
Q Consensus 358 ~HgG~----~s~~eal~~GvP~v~~P~~~D-Q~~na~rl--~~~-~G~g~~l~~~------~~~~l~~~i~~ll~~~~~~ 423 (464)
.=.|. .++.-+ ..-+|++.+|...- -......+ .++ -|+.+..=.. ++.-++..|-. +.|+
T Consensus 73 a~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d~--- 147 (174)
T 3kuu_A 73 AGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-LHDT--- 147 (174)
T ss_dssp EEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTCH---
T ss_pred EECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc-CCCH---
Confidence 66553 333333 44689999997542 21222222 222 0332111122 23333333322 3565
Q ss_pred HHHHHHHHHHHHHHHHHHcC
Q 012412 424 ELRRNAGKWRKLAKEAVAKG 443 (464)
Q Consensus 424 ~~~~~a~~l~~~~~~~~~~g 443 (464)
+++++.+.+++.+++.+.+.
T Consensus 148 ~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 148 ELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 89999999999988765543
No 151
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=51.25 E-value=25 Score=29.73 Aligned_cols=35 Identities=14% Similarity=0.281 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+++||+. |+.|.+- ..|++.|.++||+|+.+....
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 4677765 3344444 467899999999999998753
No 152
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=51.23 E-value=37 Score=29.76 Aligned_cols=33 Identities=18% Similarity=0.258 Sum_probs=24.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 21 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 21 KRALITGATKG-I--GADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56777776643 2 247899999999999888764
No 153
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=51.15 E-value=41 Score=27.26 Aligned_cols=129 Identities=13% Similarity=0.101 Sum_probs=68.4
Q ss_pred CCceEEEEecccccCCHH-HHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEe--ccChHHhhccccc
Q 012412 277 KESVVYVSYGSFVELKAE-EMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS--WCPQLEVLAHEAT 353 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~-~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~--~~p~~~ll~~~~~ 353 (464)
....||++..-....... .++++.+.|++.| .++ ... ...+. ..+. ...++.. .. +.-....+..||+
T Consensus 10 ~~~kVYLAGp~~~~~~~~~~~~~i~~~l~~~G-~V~--~~~---~~~p~-~~~~-g~~~~~~-~~~i~~~d~~~i~~aD~ 80 (165)
T 2khz_A 10 APCSVYFCGSIRGGREDQALYARIVSRLRRYG-KVL--TEH---VADAE-LEPL-GEEAAGG-DQFIHEQDLNWLQQADV 80 (165)
T ss_dssp CCCEEEEECCCSSCSHHHHHHHHHHHHHHHHS-EES--GGG---TTTTS-SSCC-STTSTTC-HHHHHHHHHHHHHHCSE
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHHHHHHhcC-Ccc--ccc---ccCch-hhcc-ccccccC-HHHHHHHHHHHHHhCCE
Confidence 345799975443322223 5688888999888 554 111 11111 0000 0000000 01 1123377889998
Q ss_pred ccee---ccCChhHHHHH---HHhCCcEeccCCcc-chhhHHHHHHhHhcceeecc--CcCHHHHHHHHHHHhc
Q 012412 354 GCFV---THCGWNSTMEA---LSLGVPMVAMPQWS-DQSTNAKYILDVWKTGLKFP--IVKRDAIADCISEILE 418 (464)
Q Consensus 354 ~~vI---~HgG~~s~~ea---l~~GvP~v~~P~~~-DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i~~ll~ 418 (464)
|| +.-..||..|. .+.|+|++++--.. +...|+- ++.. .....+. ..+.++|...|.+.+.
T Consensus 81 --vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~~g~-~~~~~~~~~~y~~~el~~~l~~~~~ 150 (165)
T 2khz_A 81 --VVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-IRGA-ADGSRFQVWDYAEGEVETMLDRYFE 150 (165)
T ss_dssp --EEEECSSCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-HHHT-CCSSSEEEEECCTTTHHHHHHHHHH
T ss_pred --EEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-hccc-CccceeEEEecCHHHHHHHHHHHHH
Confidence 65 45578999986 78899999872211 2344444 4333 2211222 3478888888887774
No 154
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=51.10 E-value=24 Score=31.61 Aligned_cols=38 Identities=21% Similarity=0.227 Sum_probs=23.8
Q ss_pred CCCCcEEEEE-cCCCccChHHH--HHHHHHHHhCCCeEEEE
Q 012412 10 SCKLAHCLVL-TYPGQGHINPL--LQFSRRLQHKGIKVTLV 47 (464)
Q Consensus 10 ~~~~~~il~~-~~~~~GH~~p~--l~la~~L~~rGh~V~~~ 47 (464)
.+..||||++ ..|-..-.+-. -.+.+.|.++||+|+++
T Consensus 19 ~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~ 59 (280)
T 4gi5_A 19 YFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVS 59 (280)
T ss_dssp ---CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEE
Confidence 3567899964 44443444433 34677888899999986
No 155
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=50.93 E-value=24 Score=30.13 Aligned_cols=50 Identities=18% Similarity=0.248 Sum_probs=29.7
Q ss_pred CCCCCCCCCCCCCcEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 1 MENNGKKPTSCKLAHCLVLTYPGQGH----INPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~il~~~~~~~GH----~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+.++.-.+..++.+|.+++.+..+. ..-...|++.|+++|+.|+.-...
T Consensus 1 ~~~~~~~~~~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 1 MEIKGESMQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp -------CCCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCccccccccCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 34333333444455788886666543 245678899999999998776653
No 156
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=50.78 E-value=63 Score=23.61 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=34.5
Q ss_pred hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 371 ~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
..+|++++ ..+.........+. |+--.+. .++.++|..++++++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~-g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKA-HADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTT-CCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHHh-CcchheeCCCCHHHHHHHHHHHHcC
Confidence 47899988 44445555666677 7755665 88999999999998865
No 157
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=50.76 E-value=26 Score=29.89 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCC--eEEEEeC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGI--KVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh--~V~~~~~ 49 (464)
|+||+|+..|+. .-+.++.++|.+.+| +|..+.+
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs 36 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVIS 36 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEe
Confidence 368988765553 346778888888888 7755554
No 158
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=50.68 E-value=1.5e+02 Score=26.98 Aligned_cols=133 Identities=8% Similarity=0.046 Sum_probs=67.7
Q ss_pred CCceEEEEecccccC-CHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccc--
Q 012412 277 KESVVYVSYGSFVEL-KAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEAT-- 353 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~-- 353 (464)
+++++++. |..... -.++...+++-+++++.+-|+++++-... .|.. .|..|.-... ...+......
T Consensus 101 g~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~~-~pht------rp~~V~~~at--~~~l~~~~~~~~ 170 (319)
T 2p90_A 101 NKPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAPMT-VPHT------RPTVVTAHGN--STDRLKDQVSLD 170 (319)
T ss_dssp CCEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEES-CCTT------SCCCEEEEES--SGGGCSSCCCCC
T ss_pred CCeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCccCC-CCCC------CCCCeEEEeC--CHHHHhhhhccc
Confidence 34455554 654432 36788889999999999988888764221 1110 2333443322 2222222111
Q ss_pred cceeccCChhHH--HHHHHhCCcEec----cCCcc---chhhHHHHH-HhHh-cceeecc----CcCHHHHHHHHHHHhc
Q 012412 354 GCFVTHCGWNST--MEALSLGVPMVA----MPQWS---DQSTNAKYI-LDVW-KTGLKFP----IVKRDAIADCISEILE 418 (464)
Q Consensus 354 ~~vI~HgG~~s~--~eal~~GvP~v~----~P~~~---DQ~~na~rl-~~~~-G~g~~l~----~~~~~~l~~~i~~ll~ 418 (464)
+-..--||...+ .++...|.|.++ +|+.. +.+.-|..+ +.+- =.|+.++ .-.++++.+.|+++..
T Consensus 171 ~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~L~e~A~~~e~~i~~l~~ 250 (319)
T 2p90_A 171 TRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLMEQTE 250 (319)
T ss_dssp CCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 001223566655 456789999987 34221 333333333 2220 1233333 4445667777777775
Q ss_pred C
Q 012412 419 G 419 (464)
Q Consensus 419 ~ 419 (464)
+
T Consensus 251 ~ 251 (319)
T 2p90_A 251 E 251 (319)
T ss_dssp H
T ss_pred h
Confidence 3
No 159
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=50.08 E-value=20 Score=29.82 Aligned_cols=39 Identities=23% Similarity=0.353 Sum_probs=27.6
Q ss_pred CCcEEEEEcCCCccChHHHH-HHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLL-QFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l-~la~~L~~rGh~V~~~~~~ 50 (464)
.|+||+++..+.+|+..-+. .+++.|.+.|++|.++.-.
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 46799987777678766554 4567777789999887653
No 160
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=49.52 E-value=17 Score=31.44 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=27.4
Q ss_pred cEEEEEcCC--CccChHHHHHHHHHHHhCCCeEEEEe
Q 012412 14 AHCLVLTYP--GQGHINPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 14 ~~il~~~~~--~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (464)
||.+|++.. +-|-..-...|++.|+++|++|.++=
T Consensus 4 mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 4 MKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp CEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 455544433 55899999999999999999999863
No 161
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=49.35 E-value=79 Score=27.07 Aligned_cols=109 Identities=11% Similarity=0.159 Sum_probs=63.5
Q ss_pred cChHHHHHHHHHHHhC-CCeEEEEeCcccccccccCCCCCCceEEEccCC-------------CCCC----CCCCccCHH
Q 012412 25 GHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDG-------------YDEG----GYAQAESIE 86 (464)
Q Consensus 25 GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------------~~~~----~~~~~~~~~ 86 (464)
|.+.-.+.+|+.+.+. |.+|.+.-+ ...+.+++ ..++.++.++.. .... ++.+...-.
T Consensus 46 ~~le~av~~a~~~~~~~~~dVIISRG-gta~~Lr~---~~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~ 121 (225)
T 2pju_A 46 LGFEKAVTYIRKKLANERCDAIIAAG-SNGAYLKS---RLSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPAL 121 (225)
T ss_dssp CCHHHHHHHHHHHTTTSCCSEEEEEH-HHHHHHHT---TCSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHH
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEeCC-hHHHHHHh---hCCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHH
Confidence 5566777788777664 577555444 45555552 234666666511 1000 111211112
Q ss_pred HHHHHHHH--------hCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEec
Q 012412 87 AYLERFWQ--------IGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLT 142 (464)
Q Consensus 87 ~~~~~~~~--------~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~ 142 (464)
..+..++. .....++..++++.++ ++|+||.|. .+...|+++|+|.+.+.+
T Consensus 122 ~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~--G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 122 VAFQKTFNLRLDQRSYITEEDARGQINELKAN--GTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHTCCEEEEEESSHHHHHHHHHHHHHT--TCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHhCCceEEEEeCCHHHHHHHHHHHHHC--CCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 22333333 1234677888888874 489999983 357789999999998764
No 162
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=49.33 E-value=1.1e+02 Score=29.41 Aligned_cols=86 Identities=17% Similarity=0.157 Sum_probs=52.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
.|++++ |.-.-.+.+++.|.+-|.+|..+......+... ... . . ... ..+..
T Consensus 314 krv~i~-----~~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~----~~~---------~-~-~v~-~~D~~------- 365 (458)
T 3pdi_B 314 ARTAIA-----ADPDLLLGFDALLRSMGAHTVAAVVPARAAALV----DSP---------L-P-SVR-VGDLE------- 365 (458)
T ss_dssp CEEEEE-----CCHHHHHHHHHHHHTTTCEEEEEEESSCCSCCT----TTT---------S-S-CEE-ESHHH-------
T ss_pred CEEEEE-----CCcHHHHHHHHHHHHCCCEEEEEEECCCChhhh----hCc---------c-C-cEE-eCCHH-------
Confidence 477774 334567889999999999999888765332222 110 0 0 000 00111
Q ss_pred HhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEE
Q 012412 94 QIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPF 140 (464)
Q Consensus 94 ~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (464)
.+++++++. +| |++|.+.. +..+|+++|||++.+
T Consensus 366 -----~le~~i~~~----~p-Dllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 -----DLEHAARAG----QA-QLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp -----HHHHHHHHH----TC-SEEEECTT---HHHHHHHTTCCEEEC
T ss_pred -----HHHHHHHhc----CC-CEEEEChh---HHHHHHHcCCCEEEe
Confidence 233444443 34 99999854 456899999998864
No 163
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=48.75 E-value=82 Score=23.73 Aligned_cols=108 Identities=8% Similarity=0.084 Sum_probs=62.2
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceeccCChhHHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTHCGWNSTMEAL 369 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal 369 (464)
..++.....+...|+..++.++...... +.+ +.+.+ ....+.+.++.|... |.. +.+.+
T Consensus 11 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~a~-~~l~~---~~~dlvi~d~~~~~~--------------g~~-~~~~l 69 (142)
T 2qxy_A 11 DESRITFLAVKNALEKDGFNVIWAKNEQ--EAF-TFLRR---EKIDLVFVDVFEGEE--------------SLN-LIRRI 69 (142)
T ss_dssp CSCHHHHHHHHHHHGGGTCEEEEESSHH--HHH-HHHTT---SCCSEEEEECTTTHH--------------HHH-HHHHH
T ss_pred eCCHHHHHHHHHHHHhCCCEEEEECCHH--HHH-HHHhc---cCCCEEEEeCCCCCc--------------HHH-HHHHH
Confidence 4466777778888888888776332211 101 11111 234555555533221 111 12222
Q ss_pred ---HhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcCC
Q 012412 370 ---SLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 420 (464)
Q Consensus 370 ---~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~~ 420 (464)
...+|+|++--..+ ........+. |+--.+. .++.++|..+|++++...
T Consensus 70 ~~~~~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~kP~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 70 REEFPDTKVAVLSAYVD-KDLIINSVKA-GAVDYILKPFRLDYLLERVKKIISST 122 (142)
T ss_dssp HHHCTTCEEEEEESCCC-HHHHHHHHHH-TCSCEEESSCCHHHHHHHHHHHHHC-
T ss_pred HHHCCCCCEEEEECCCC-HHHHHHHHHC-CcceeEeCCCCHHHHHHHHHHHHhhc
Confidence 34688888764443 4455566677 7766666 889999999999999764
No 164
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=48.49 E-value=24 Score=24.27 Aligned_cols=48 Identities=13% Similarity=0.213 Sum_probs=32.8
Q ss_pred HhCCcEeccCCccchhhHHHH---HHhHhcceeecc-CcCHHHHHHHHHHHhc
Q 012412 370 SLGVPMVAMPQWSDQSTNAKY---ILDVWKTGLKFP-IVKRDAIADCISEILE 418 (464)
Q Consensus 370 ~~GvP~v~~P~~~DQ~~na~r---l~~~~G~g~~l~-~~~~~~l~~~i~~ll~ 418 (464)
-.|+|+|++-....|.+.-.. ..+- |+...+. .-++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-CcchhhhccCCHHHHHHHHHHHHH
Confidence 369999998777766663332 2334 5554444 7889999999988873
No 165
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=48.41 E-value=46 Score=29.20 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=48.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccC---CCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRD---SSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
|+.+++.++.|= =.++|+.|+++|.+|.+..... +...+. ....+.....+.-+..+
T Consensus 10 KvalVTGas~GI---G~aia~~la~~Ga~Vvi~~~~~--~~~~~~~~~l~~~g~~~~~~~~Dv~~--------------- 69 (255)
T 4g81_D 10 KTALVTGSARGL---GFAYAEGLAAAGARVILNDIRA--TLLAESVDTLTRKGYDAHGVAFDVTD--------------- 69 (255)
T ss_dssp CEEEETTCSSHH---HHHHHHHHHHTTCEEEECCSCH--HHHHHHHHHHHHTTCCEEECCCCTTC---------------
T ss_pred CEEEEeCCCcHH---HHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhcCCcEEEEEeeCCC---------------
Confidence 688888887652 2578999999999998876532 221100 01234445555422222
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCC
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDS 121 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~ 121 (464)
...++.+++++.+...++|++|...
T Consensus 70 -----~~~v~~~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 70 -----ELAIEAAFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp -----HHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred -----HHHHHHHHHHHHHHCCCCcEEEECC
Confidence 1234455555554456679999985
No 166
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=48.37 E-value=23 Score=28.40 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=30.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
..+++++..|. =+.|++++++.|.++|.+|+++ .....+
T Consensus 23 ~~~~llIaGG~--GItPl~sm~~~l~~~~~~v~l~-g~r~~~ 61 (158)
T 3lrx_A 23 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFEP 61 (158)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHHTCEEEEE-EECBGG
T ss_pred CCeEEEEEccC--cHHHHHHHHHHHHhcCCcEEEE-EeCCHH
Confidence 45788877665 3999999999999999999999 554433
No 167
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=48.06 E-value=31 Score=30.50 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=23.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| +- .++|+.|+++|++|.++..
T Consensus 12 k~~lVTGas~G-IG--~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAARG-QG--RAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp CEEEEESTTSH-HH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCccH-HH--HHHHHHHHHcCCEEEEEec
Confidence 55666666543 22 5789999999999998864
No 168
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=48.02 E-value=27 Score=31.63 Aligned_cols=47 Identities=13% Similarity=0.058 Sum_probs=30.0
Q ss_pred CCCCCCCCC--CcEEEEEcCCCcc-C---hHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 4 NGKKPTSCK--LAHCLVLTYPGQG-H---INPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 4 ~~~~~~~~~--~~~il~~~~~~~G-H---~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+|.|++... ++||+++..+..+ | +.-...++++|.+.||+|..+...
T Consensus 2 ~~~~~~~~~~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 2 PGSMSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp ------CCGGGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCcCccchhhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 355554443 4688887776443 2 346788999999999999998853
No 169
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=48.01 E-value=39 Score=30.99 Aligned_cols=81 Identities=10% Similarity=-0.037 Sum_probs=48.3
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceecc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTH 359 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~H 359 (464)
.|+++-.+......+.+..+...|++.+..+.+...... . ...++ ........+++ +|.-
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~-~-~a~~~----------------~~~~~~~~~d~--vvv~ 87 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKI-G-DATLE----------------AERAMHENYDV--LIAA 87 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCST-T-HHHHH----------------HHHHTTTTCSE--EEEE
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCc-c-hHHHH----------------HHHHhhcCCCE--EEEE
Confidence 455554443222346677888888887776655442210 0 00011 01122234677 9999
Q ss_pred CChhHHHHHHH------hCCcEeccCC
Q 012412 360 CGWNSTMEALS------LGVPMVAMPQ 380 (464)
Q Consensus 360 gG~~s~~eal~------~GvP~v~~P~ 380 (464)
||-||+.|++. .++|+.++|.
T Consensus 88 GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 88 GGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp ECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred cCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 99999999853 4689999996
No 170
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=47.85 E-value=48 Score=29.35 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=24.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| + =.++|+.|+++|++|.++..
T Consensus 12 k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 12 KVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEec
Confidence 56667766643 2 35789999999999998865
No 171
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=47.77 E-value=32 Score=29.98 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCcc-----------ChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQG-----------HINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~G-----------H~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+|||++-.+..+ ...=+......|.+.|++|+++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5689975554211 22456666888999999999999753
No 172
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=47.55 E-value=19 Score=33.07 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
.++||.|+-.++.| +-++|+.|+++||+|+..=.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 35689999999877 55699999999999998754
No 173
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=47.47 E-value=54 Score=28.91 Aligned_cols=35 Identities=9% Similarity=0.140 Sum_probs=24.6
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+++++.++. +-+- .++|+.|+++|++|.++....
T Consensus 27 k~vlVTGasg~~GIG--~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 27 KKILITGLLSNKSIA--YGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CEEEECCCCSTTCHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCCCCCHH--HHHHHHHHHcCCEEEEeeCch
Confidence 5666666441 2232 578999999999999987754
No 174
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=47.21 E-value=31 Score=30.52 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++. -+- .++|+.|+++|++|..+...
T Consensus 6 k~vlVTGas~-gIG--~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 6 KVWLVTGASS-GFG--RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CEEEETTTTS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5666666653 333 37889999999999888764
No 175
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=47.16 E-value=33 Score=30.13 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 16 ~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 16 KKLVVITGASSG-I--GEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CCEEEEESTTSH-H--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 366777766643 2 247899999999999988764
No 176
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=47.15 E-value=20 Score=31.48 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=29.7
Q ss_pred CCCcEEEEEcCC--CccChHHHHHHHHHHHhCCCeEEEEe
Q 012412 11 CKLAHCLVLTYP--GQGHINPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 11 ~~~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (464)
.+.|+.+|++.. +-|-..-...|++.|+++|++|.++=
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 345666655444 44889999999999999999999874
No 177
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=46.94 E-value=24 Score=29.65 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCccChHHHHH-HHHHHHhCCCeEEEEeC
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQ-FSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~-la~~L~~rGh~V~~~~~ 49 (464)
.++|||+++..+.+|+..-+.. +++.|.+.|++|.++--
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 3568999877766887665544 46677778999887754
No 178
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=46.86 E-value=21 Score=26.85 Aligned_cols=65 Identities=11% Similarity=0.126 Sum_probs=47.0
Q ss_pred hccccccceeccCChhH---------HHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 348 LAHEATGCFVTHCGWNS---------TMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 348 l~~~~~~~vI~HgG~~s---------~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
+..+++ +|--.|..| +-.|...|+|++++=..+.+. .-..+++. +..+. ..+.+.|.++|+..++
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~iV--~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSEVV--GWNPHCIRDALEDALD 109 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSEEE--CSCHHHHHHHHHHHHC
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cceec--cCCHHHHHHHHHhccC
Confidence 567888 998999887 567788999999876555442 22336666 44444 4789999999988764
No 179
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=45.32 E-value=45 Score=29.83 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=24.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 29 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 29 KVAFITGAARG-Q--GRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEecc
Confidence 56677766643 2 257899999999999987653
No 180
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=45.20 E-value=47 Score=29.33 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=23.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| + =.++|+.|+++|++|.++..
T Consensus 16 k~~lVTGas~g-I--G~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAARG-Q--GRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEec
Confidence 56666666543 2 25789999999999998864
No 181
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=44.96 E-value=12 Score=33.65 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=26.1
Q ss_pred HhhccccccceeccCChhHHHHHHHh----CCcEeccC
Q 012412 346 EVLAHEATGCFVTHCGWNSTMEALSL----GVPMVAMP 379 (464)
Q Consensus 346 ~ll~~~~~~~vI~HgG~~s~~eal~~----GvP~v~~P 379 (464)
..-..+|+ +|.-||-||+.+++.. ++|++.++
T Consensus 59 ~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 59 EIGQQADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp HHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred hcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 34446788 9999999999999743 78998887
No 182
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=44.78 E-value=1.2e+02 Score=28.36 Aligned_cols=88 Identities=8% Similarity=-0.019 Sum_probs=55.0
Q ss_pred EEEEEcCCCcc-ChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHH
Q 012412 15 HCLVLTYPGQG-HINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFW 93 (464)
Q Consensus 15 ~il~~~~~~~G-H~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 93 (464)
++++++.|+.+ .-..+..+.++|.+.|.+|.+.+.....+... ...++.+.. +.+
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~---~~~~v~~~~----~~~----------------- 277 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRID---EGDDCLVVG----EVN----------------- 277 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSS---CCTTEEEES----SCC-----------------
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCccccccc---CCCCEEEec----CCC-----------------
Confidence 56788888877 55567788899988899999987754332221 122333321 111
Q ss_pred HhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEE
Q 012412 94 QIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPF 140 (464)
Q Consensus 94 ~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (464)
..+++.. .|++|+..... +..-|-..|+|.+++
T Consensus 278 ------~~~ll~~-------~d~~v~~gG~~-t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 278 ------HQVLFGR-------VAAVVHHGGAG-TTTAVTRAGAPQVVV 310 (404)
T ss_dssp ------HHHHGGG-------SSEEEECCCHH-HHHHHHHHTCCEEEC
T ss_pred ------HHHHHhh-------CcEEEECCcHH-HHHHHHHcCCCEEEc
Confidence 1222211 49999997653 455677889999985
No 183
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=44.73 E-value=21 Score=31.20 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=29.4
Q ss_pred CCcEEEEEcCC--CccChHHHHHHHHHHHhCCCeEEEEe
Q 012412 12 KLAHCLVLTYP--GQGHINPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 12 ~~~~il~~~~~--~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (464)
+++|.+|++.. +-|=..-...|++.|+++|.+|.++=
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 35577665544 44888999999999999999999983
No 184
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=44.42 E-value=64 Score=28.31 Aligned_cols=33 Identities=12% Similarity=0.022 Sum_probs=26.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+.+++.++.| + =.++|+.|+++|++|.+....
T Consensus 12 K~alVTGas~G-I--G~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 12 KRALITAGTKG-A--GAATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp CEEEESCCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeccCcH-H--HHHHHHHHHHcCCEEEEEECC
Confidence 68888887765 2 267899999999999887653
No 185
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=44.31 E-value=50 Score=28.19 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=63.1
Q ss_pred ccChHHHHHHHHHHHhCCCeEEEEeCccccccccc-CCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHh---Cc--
Q 012412 24 QGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHR-DSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQI---GP-- 97 (464)
Q Consensus 24 ~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~-- 97 (464)
.-++.-...+....+++|-+|.|+++......+.. .....|-.++ -.-|....+++.......++.+... ..
T Consensus 39 ~~~L~~A~~~i~~~~~~~~~iLfVgTk~~~~~~V~~~A~~~g~~yv--~~rWlgG~LTN~~ti~~~i~~l~~le~~~~~~ 116 (218)
T 3r8n_B 39 VPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFV--NHRWLGGMLTNWKTVRQSIKRLKDLETQSQDG 116 (218)
T ss_dssp GGGTTTHHHHHHHHHHTTCCCCEECCCTTTTTTTTTHHHHSSCCEE--CSSCCSSSSTTTTTTHHHHHHHHHHHTTTSSS
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHHHHHHHHHcCCeeE--CCccCCCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 35566667777888889999999998765444331 0011222222 2234443445555544444433221 00
Q ss_pred ----------HHHHHHHHHhcC--------CCCCccEEE-eCCch-hhHHHHHHHcCCccEEEecch
Q 012412 98 ----------QTLTELVEKMNG--------SDSPVDCIV-YDSIL-LWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 98 ----------~~l~~~~~~l~~--------~~~p~DlVI-~D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (464)
..+....+++.. ...| |+|| .|+.. .-+..=|..+|||+|.+.-+.
T Consensus 117 ~f~~l~Kke~~~~~re~~kl~k~lgGik~m~~~P-dllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 117 TFDKLTKKEALMRTRELEKLENSLGGIKDMGGLP-DALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp SCSSSCTTTTTTTHHHHHHHHSSSSSSSSCSSCC-CSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred hhhhccHHHHHHHHHHHHHHHHhhccccccccCC-CeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 011222222211 1134 7765 58766 446667999999999876554
No 186
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=44.13 E-value=17 Score=30.27 Aligned_cols=74 Identities=16% Similarity=0.141 Sum_probs=50.1
Q ss_pred chhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCc----hHHHHHHHHHHHHHHHHH----HHcCCCcHHHHHHHH
Q 012412 383 DQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGER----GKELRRNAGKWRKLAKEA----VAKGGSSDSNIDEFV 454 (464)
Q Consensus 383 DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~----~~~~~~~a~~l~~~~~~~----~~~gg~~~~~~~~~~ 454 (464)
+..+.+..-+.. |+|+.+ |+|++.++|.+.+.... -++|+ +...+-..+|+. -++|...-..+++-+
T Consensus 100 ~~id~~~Fe~~c-GVGV~V---T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~ 174 (187)
T 3tl4_X 100 EASTKMGMNENS-GVGIEI---TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEV 174 (187)
T ss_dssp GGCCHHHHHHTT-TTTCCC---CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHH
T ss_pred CCCCHHHHHHHC-CCCeEe---CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence 456667777788 999998 89999999999995421 12455 566666666531 234555567777777
Q ss_pred HHHHhhc
Q 012412 455 ASLACSK 461 (464)
Q Consensus 455 ~~l~~~~ 461 (464)
-+|.+.+
T Consensus 175 l~lLGPK 181 (187)
T 3tl4_X 175 LKLLGPK 181 (187)
T ss_dssp HHHHCSC
T ss_pred HHHcCCc
Confidence 7766654
No 187
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=44.08 E-value=34 Score=30.41 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=24.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+++++.++.| +- .++|+.|+++|++|.++....
T Consensus 10 k~vlVTGas~G-IG--~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 10 KTMFISGGSRG-IG--LAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp CEEEEESCSSH-HH--HHHHHHHHTTTCEEEEEESCC
T ss_pred CEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEECCh
Confidence 56667766543 22 578999999999999887643
No 188
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=44.02 E-value=80 Score=25.81 Aligned_cols=114 Identities=9% Similarity=0.088 Sum_probs=64.2
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEE---EeccChHHhhccccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLV---VSWCPQLEVLAHEATGC 355 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~---~~~~p~~~ll~~~~~~~ 355 (464)
.+++.-.|+.... ....+++.|.+.+..+-++........+..+..+. ..+.++. .+|+++..+-..+|+ .
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~--l~~~v~~~~~~~~~~hi~l~~~aD~-~ 80 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGRKFINGEILKQ--FCDNYYDEFEDPFLNHVDIANKHDK-I 80 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHH--HCSCEECTTTCTTCCHHHHHHTCSE-E
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHH--hcCCEEecCCCCccccccccchhCE-E
Confidence 4566666666532 24456677777777776666554444444332222 2223321 135666677666775 2
Q ss_pred eeccCChhHH-------------HHHHHhCCcEeccCCccch-------hhHHHHHHhHhccee
Q 012412 356 FVTHCGWNST-------------MEALSLGVPMVAMPQWSDQ-------STNAKYILDVWKTGL 399 (464)
Q Consensus 356 vI~HgG~~s~-------------~eal~~GvP~v~~P~~~DQ-------~~na~rl~~~~G~g~ 399 (464)
+|-=+-.||+ .-++..++|+++.|-.+.+ ..|-.+|.+. |+=+
T Consensus 81 vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~i 143 (175)
T 3qjg_A 81 IILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVSI 143 (175)
T ss_dssp EEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCEE
T ss_pred EEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCEE
Confidence 4444444443 2357789999999954422 3467777777 7644
No 189
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=43.86 E-value=24 Score=27.67 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccChHHH-HHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPL-LQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~-l~la~~L~~rGh~V~~~~~~~ 51 (464)
+||+++-.+.+|+..-+ ..+++.|.++|++|.++....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 57776555567776544 346777888899998876543
No 190
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=43.73 E-value=1.4e+02 Score=24.74 Aligned_cols=100 Identities=13% Similarity=0.056 Sum_probs=54.2
Q ss_pred hHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcc-cCcCChhhhhhccCCCcEEEEeccCh
Q 012412 266 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSLVVSWCPQ 344 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~~p~ 344 (464)
.++-++|.++. ..+|+-|... -.+....++..+.+-+++=+.+... ....+.. --+....+++...
T Consensus 34 ~~lg~~la~~g---~~lv~GGG~~----GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~------~~~~~i~~~~~~~ 100 (189)
T 3sbx_A 34 GAVGAAIAARG---WTLVWGGGHV----SAMGAVSSAARAHGGWTVGVIPKMLVHRELADH------DADELVVTETMWE 100 (189)
T ss_dssp HHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCT------TCSEEEEESSHHH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEcCchhhhcccCCC------CCCeeEEcCCHHH
Confidence 44555666532 4555554332 3666667766666666665544321 0111111 1133445555544
Q ss_pred H--HhhccccccceeccCChhHHHHHH---------HhCCcEeccC
Q 012412 345 L--EVLAHEATGCFVTHCGWNSTMEAL---------SLGVPMVAMP 379 (464)
Q Consensus 345 ~--~ll~~~~~~~vI~HgG~~s~~eal---------~~GvP~v~~P 379 (464)
. .++.++|+ .++--||+||+-|.. .+++|++++-
T Consensus 101 Rk~~m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 101 RKQVMEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp HHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHHHHHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 3 44456664 356778899997764 2699999874
No 191
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=43.19 E-value=30 Score=29.51 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=25.1
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
..+.++||+.- +.|.+- ..++++|.++||+|+.++...
T Consensus 18 ~l~~~~ilVtG--atG~iG--~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 18 YFQGMRVLVVG--ANGKVA--RYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp ---CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred CcCCCeEEEEC--CCChHH--HHHHHHHHhCCCeEEEEECCh
Confidence 34467777653 334443 467899999999999998653
No 192
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=42.48 E-value=23 Score=33.34 Aligned_cols=60 Identities=17% Similarity=0.315 Sum_probs=40.3
Q ss_pred ChHHhhccccccceeccCChhHHHHHHHh----CC-cEeccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHh
Q 012412 343 PQLEVLAHEATGCFVTHCGWNSTMEALSL----GV-PMVAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEIL 417 (464)
Q Consensus 343 p~~~ll~~~~~~~vI~HgG~~s~~eal~~----Gv-P~v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll 417 (464)
+..++-..+|+ +|+=||-||++.|+.. ++ |++.+... .+ |.. .+++.+++.+++++++
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~l---GFL-t~~~~~~~~~al~~il 169 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------TL---GFL-SPFDFKEHKKVFQEVI 169 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------SC---CSS-CCEEGGGHHHHHHHHH
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------Cc---ccC-CcCChHHHHHHHHHHh
Confidence 34455567898 9999999999999754 57 78877521 11 111 1345677777777777
Q ss_pred cC
Q 012412 418 EG 419 (464)
Q Consensus 418 ~~ 419 (464)
++
T Consensus 170 ~g 171 (388)
T 3afo_A 170 SS 171 (388)
T ss_dssp TT
T ss_pred cC
Confidence 65
No 193
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=42.36 E-value=1.7e+02 Score=26.96 Aligned_cols=90 Identities=10% Similarity=-0.018 Sum_probs=55.5
Q ss_pred cEEEEEcCCCcc----ChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHH
Q 012412 14 AHCLVLTYPGQG----HINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYL 89 (464)
Q Consensus 14 ~~il~~~~~~~G----H~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 89 (464)
.++++++.|+.+ ...-+..+.++|.+.+.+|.+++.....+.+. ....++.+...- +
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~--~~~~~v~~~~~~----~------------- 292 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLG--TLPRNVRAVGWT----P------------- 292 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGC--SCCTTEEEESSC----C-------------
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhc--cCCCcEEEEccC----C-------------
Confidence 457778777762 34557888899988899999998875544333 112233222110 1
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEE
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPF 140 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (464)
+.+++.. .|++|+..... +..=|-..|+|.|++
T Consensus 293 ----------~~~ll~~-------ad~~v~~~G~~-t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 293 ----------LHTLLRT-------CTAVVHHGGGG-TVMTAIDAGIPQLLA 325 (398)
T ss_dssp ----------HHHHHTT-------CSEEEECCCHH-HHHHHHHHTCCEEEC
T ss_pred ----------HHHHHhh-------CCEEEECCCHH-HHHHHHHhCCCEEEc
Confidence 1222221 49999876543 555677889999985
No 194
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=42.05 E-value=63 Score=27.40 Aligned_cols=108 Identities=11% Similarity=0.065 Sum_probs=54.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHH
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 90 (464)
|+||.++-.++ |+ -+.++.++|.+. +|+|..+.+......+.+.....|+.+..++.. .+. +...
T Consensus 3 m~ki~vl~sG~-g~--~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~----~~~---~~~~--- 69 (212)
T 3av3_A 3 MKRLAVFASGS-GT--NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK----DYP---SKAA--- 69 (212)
T ss_dssp CEEEEEECCSS-CH--HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG----GSS---SHHH---
T ss_pred CcEEEEEEECC-cH--HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc----ccc---chhh---
Confidence 46887765555 33 366777888877 689876665421111110011456776655421 111 1111
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch-hhHHHHHHHcCCccEEEecc
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (464)
....+.+.++++ .+ |+||.-.+. .....+-..+...++-+.++
T Consensus 70 -----~~~~~~~~l~~~----~~-Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 70 -----FESEILRELKGR----QI-DWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -----HHHHHHHHHHHT----TC-CEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -----hHHHHHHHHHhc----CC-CEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 111222333332 44 999987654 43444555666666766544
No 195
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.95 E-value=17 Score=34.03 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
.|||+|+-.|-.| +.+|..|+++|++|+++-.
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 3799998666555 7788999999999999843
No 196
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=41.90 E-value=96 Score=27.09 Aligned_cols=35 Identities=26% Similarity=0.221 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.-|.++++.++.| + =.++|+.|+++|++|.++...
T Consensus 13 ~~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 13 TDKVAIVTGGSSG-I--GLAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp TTCEEEESSTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 3456667766543 2 257899999999999987653
No 197
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=41.63 E-value=29 Score=29.70 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=23.5
Q ss_pred CCCCCcEEEEEcCCCc-----cChHHHH--HHHHHHHhCCCeEEEEeC
Q 012412 9 TSCKLAHCLVLTYPGQ-----GHINPLL--QFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~-----GH~~p~l--~la~~L~~rGh~V~~~~~ 49 (464)
.+..|||||++..+.. +-.+..+ .+++.|.+.||+|.++--
T Consensus 21 ~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 21 QSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp ---CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred ccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 3445779997655442 2244322 355666678999987654
No 198
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=41.63 E-value=60 Score=29.63 Aligned_cols=78 Identities=12% Similarity=-0.013 Sum_probs=46.8
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccceecc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFVTH 359 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI~H 359 (464)
.|+++-.+... +....+...|++.+..+.+...... ... .++ -...+-..+++ +|.-
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~-~~~-~~~----------------~~~~~~~~~d~--vvv~ 89 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEK-GDA-ARY----------------VEEARKFGVAT--VIAG 89 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCST-THH-HHH----------------HHHHHHHTCSE--EEEE
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCc-chH-HHH----------------HHHHHhcCCCE--EEEE
Confidence 45555433322 5667788888888877665542210 000 010 01122235677 9999
Q ss_pred CChhHHHHHHH--------hCCcEeccCC
Q 012412 360 CGWNSTMEALS--------LGVPMVAMPQ 380 (464)
Q Consensus 360 gG~~s~~eal~--------~GvP~v~~P~ 380 (464)
||-||+.|++. .++|+.++|.
T Consensus 90 GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 90 GGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp ESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred ccchHHHHHHHHHhhcccCCCCeEEEecC
Confidence 99999999853 5789888996
No 199
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=41.51 E-value=48 Score=29.13 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
-|+++++.++.| + =.++|+.|+++|++|.+...
T Consensus 28 ~k~vlVTGas~g-I--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG-I--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 367777776643 2 25789999999999988765
No 200
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=41.47 E-value=1.8e+02 Score=25.34 Aligned_cols=50 Identities=4% Similarity=0.060 Sum_probs=29.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCcccccc-cccCCCCCCceEEEcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKS-LHRDSSSSSIPLEAIS 71 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~-~~~~~~~~~~~~~~i~ 71 (464)
||||+. |+.|.+-. .+++.|.++ ||+|+.++....... +. ..++.++..+
T Consensus 1 M~ilVt--GatG~iG~--~l~~~L~~~~g~~V~~~~R~~~~~~~~~----~~~v~~~~~D 52 (289)
T 3e48_A 1 MNIMLT--GATGHLGT--HITNQAIANHIDHFHIGVRNVEKVPDDW----RGKVSVRQLD 52 (289)
T ss_dssp CCEEEE--TTTSHHHH--HHHHHHHHTTCTTEEEEESSGGGSCGGG----BTTBEEEECC
T ss_pred CEEEEE--cCCchHHH--HHHHHHhhCCCCcEEEEECCHHHHHHhh----hCCCEEEEcC
Confidence 456654 44455554 566678888 999999987543221 12 3456655543
No 201
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=41.47 E-value=20 Score=31.62 Aligned_cols=34 Identities=15% Similarity=0.068 Sum_probs=27.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+.+++.++.|=- .++|+.|+++|.+|.++....
T Consensus 8 KvalVTGas~GIG---~aia~~la~~Ga~Vv~~~r~~ 41 (258)
T 4gkb_A 8 KVVIVTGGASGIG---GAISMRLAEERAIPVVFARHA 41 (258)
T ss_dssp CEEEEETTTSHHH---HHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCCHHH---HHHHHHHHHcCCEEEEEECCc
Confidence 6888888876522 678999999999999888643
No 202
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=41.46 E-value=36 Score=30.81 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=27.3
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 6 KKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+|....+.++||+. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 4 ~~~~~~~~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 4 DNAVLPEGSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCSSCTTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CcccCCCCCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34344556677665 3334443 46789999999999988764
No 203
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=41.36 E-value=12 Score=34.58 Aligned_cols=47 Identities=15% Similarity=0.231 Sum_probs=33.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEE
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLE 68 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~ 68 (464)
.|||.|+-.|..| ..+|..|+++||+|+++......+.+. ..++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~----~~g~~~~ 49 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQ----TAGLRLT 49 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHH----HTCEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHH----HCCCEEe
Confidence 5789999766655 457889999999999999754444444 3455544
No 204
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=41.32 E-value=72 Score=24.79 Aligned_cols=43 Identities=12% Similarity=-0.113 Sum_probs=32.5
Q ss_pred EEEE-EcCCCccChHH--HHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 15 HCLV-LTYPGQGHINP--LLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 15 ~il~-~~~~~~GH~~p--~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
|++| ++.+.+|+... .+.+|.++...||+|.++......-.+.
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~~ 52 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQLT 52 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGGB
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHh
Confidence 5774 77777776554 4777999999999999998876665555
No 205
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=41.27 E-value=76 Score=27.42 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=24.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 8 k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 8 ATVAVIGAGDY-I--GAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56666666543 2 358899999999999988764
No 206
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=41.20 E-value=28 Score=31.07 Aligned_cols=39 Identities=18% Similarity=0.264 Sum_probs=30.4
Q ss_pred CcEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLT--YPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~--~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+|++.+. -||-|-..-...||..|+++|++|.++=...
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 45666443 4566999999999999999999999886654
No 207
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=40.81 E-value=1.5e+02 Score=25.09 Aligned_cols=101 Identities=14% Similarity=0.115 Sum_probs=54.2
Q ss_pred hhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccCh
Q 012412 265 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQ 344 (464)
Q Consensus 265 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~ 344 (464)
..++-++|..+ ....|+-|.. -.+....++..+.+.+++-+...-..+..+..+ -......+..+.
T Consensus 58 A~~lg~~La~~---g~~lVsGGg~-----GiM~aa~~gAl~~gG~~iGV~~~~P~~~~~~~~------~t~~~~~~~f~~ 123 (217)
T 1wek_A 58 GYRLGRALAEA---GFGVVTGGGP-----GVMEAVNRGAYEAGGVSVGLNIELPHEQKPNPY------QTHALSLRYFFV 123 (217)
T ss_dssp HHHHHHHHHHH---TCEEEECSCS-----HHHHHHHHHHHHTTCCEEEEEECCTTCCCCCSC------CSEEEEESCHHH
T ss_pred HHHHHHHHHHC---CCEEEeCChh-----hHHHHHHHHHHHcCCCEEEEeeCCcchhhcccc------CCcCcccCCHHH
Confidence 35555667653 2567776653 466666666655566655442110001111111 112233455565
Q ss_pred H-Hhh-ccccccceeccCChhHHHHH---HH-------hCCcEeccCC
Q 012412 345 L-EVL-AHEATGCFVTHCGWNSTMEA---LS-------LGVPMVAMPQ 380 (464)
Q Consensus 345 ~-~ll-~~~~~~~vI~HgG~~s~~ea---l~-------~GvP~v~~P~ 380 (464)
. .++ ..++ ..++--||+||+-|. +. +++|++++-.
T Consensus 124 Rk~~m~~~sd-a~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~ 170 (217)
T 1wek_A 124 RKVLFVRYAV-GFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR 170 (217)
T ss_dssp HHHHHHHTEE-EEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH
T ss_pred HHHHHHHhCC-EEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc
Confidence 4 333 3444 346677999998665 43 5799998863
No 208
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=40.52 E-value=48 Score=29.06 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=26.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+.+++.++.| + =.++|+.|+++|.+|.++...
T Consensus 8 KvalVTGas~G-I--G~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 8 KVVIVTGAGSG-I--GRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCH-H--HHHHHHHHHHcCCEEEEEECC
Confidence 68888887765 2 367899999999999887653
No 209
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=40.51 E-value=1.6e+02 Score=26.45 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=61.1
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhc--cccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA--HEATGC 355 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~--~~~~~~ 355 (464)
.+.+|.+|.++. .++.++.+. +..++.++..+. +. .+.+.++. ++. .-+-...+++. .+|+
T Consensus 7 rigiiG~G~ig~-------~~~~~l~~~~~~~~~av~d~~~-~~-~~~~a~~~----~~~-~~~~~~~~ll~~~~~D~-- 70 (329)
T 3evn_A 7 RYGVVSTAKVAP-------RFIEGVRLAGNGEVVAVSSRTL-ES-AQAFANKY----HLP-KAYDKLEDMLADESIDV-- 70 (329)
T ss_dssp EEEEEBCCTTHH-------HHHHHHHHHCSEEEEEEECSCS-ST-TCC---CC----CCS-CEESCHHHHHTCTTCCE--
T ss_pred EEEEEechHHHH-------HHHHHHHhCCCcEEEEEEcCCH-HH-HHHHHHHc----CCC-cccCCHHHHhcCCCCCE--
Confidence 367788887752 344455443 345555554321 11 11221110 110 12445678888 4555
Q ss_pred eeccCC----hhHHHHHHHhCCcEec-cCCccc--hhh-HHHHHHhHhcceeecc---CcCHHHHHHHHHHHhc
Q 012412 356 FVTHCG----WNSTMEALSLGVPMVA-MPQWSD--QST-NAKYILDVWKTGLKFP---IVKRDAIADCISEILE 418 (464)
Q Consensus 356 vI~HgG----~~s~~eal~~GvP~v~-~P~~~D--Q~~-na~rl~~~~G~g~~l~---~~~~~~l~~~i~~ll~ 418 (464)
|+-.-- ...+.+|+.+|+++++ -|+..+ +.. -.+..++. |+-+... .+.+ ..+.+++++.
T Consensus 71 V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~-~~~~~v~~~~r~~p--~~~~~~~~i~ 141 (329)
T 3evn_A 71 IYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESC-NLFLMEAQKSVFIP--MTQVIKKLLA 141 (329)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT-TCCEEEECSSCSSH--HHHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHc-CCEEEEEEcccCCH--HHHHHHHHHh
Confidence 663333 3457889999999988 687553 322 33344555 6555444 3443 2344455554
No 210
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=40.45 E-value=32 Score=31.92 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=21.2
Q ss_pred cccccceeccCChhHH---HHHHHhCCcEec
Q 012412 350 HEATGCFVTHCGWNST---MEALSLGVPMVA 377 (464)
Q Consensus 350 ~~~~~~vI~HgG~~s~---~eal~~GvP~v~ 377 (464)
++|+ ||++||+-+. .-|-..|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 6788 9999998664 557778999986
No 211
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=40.24 E-value=27 Score=28.98 Aligned_cols=37 Identities=27% Similarity=0.392 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccChHHHHH-HHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQ-FSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~-la~~L~~rGh~V~~~~~~ 50 (464)
+|||+++..+ +|+..-+.. +++.|.+.|++|.++--.
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 5799987777 887665544 466666679999887543
No 212
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=40.04 E-value=18 Score=32.61 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=24.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
..+++||+.- +.|.+- ..|++.|.++||+|+.++...
T Consensus 5 ~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 5 TLKHRILITG--GAGFIG--GHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp --CCEEEEET--TTSHHH--HHHHHHHHHTTCCEEEECCCS
T ss_pred cCCCeEEEEC--CCChHH--HHHHHHHHHCCCEEEEEecCC
Confidence 3456777653 334443 367899999999999987643
No 213
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=40.03 E-value=51 Score=28.75 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|.++++.++.| + =.++|+.|+++|++|.++...
T Consensus 3 K~vlVTGas~G-I--G~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG-I--GKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56777877765 2 257899999999999988754
No 214
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=39.93 E-value=28 Score=29.32 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
||||+. |+.|.+- ..|+++|.++||+|+.++...
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 466554 3334443 578899999999999998653
No 215
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=39.63 E-value=52 Score=24.30 Aligned_cols=38 Identities=8% Similarity=0.109 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
+++|||+++..|.|--.-.-.+-+.+.++|.++.+-..
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 35689998888776656666888888889988765443
No 216
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=39.58 E-value=1.5e+02 Score=23.98 Aligned_cols=138 Identities=17% Similarity=0.165 Sum_probs=75.7
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhcccccccee
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 357 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI 357 (464)
+|.|-|-+||.+ +....++....|+.++..+-+.+-+. ...|+.+.+ |+-.. --..+++ +|
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--HR~p~~~~~------------~~~~a-~~~g~~V--iI 66 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA--HRTPKETVE------------FVENA-DNRGCAV--FI 66 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTSHHHHHH------------HHHHH-HHTTEEE--EE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc--cCCHHHHHH------------HHHHH-HhCCCcE--EE
Confidence 356778888876 67888899999999998877666554 334443321 11100 0123455 77
Q ss_pred ccCCh----hHHHHHHHhCCcEeccCCcc-chhhHHHHH--HhH-hcceeeccCc------CHHHHHHHHHHHhcCCchH
Q 012412 358 THCGW----NSTMEALSLGVPMVAMPQWS-DQSTNAKYI--LDV-WKTGLKFPIV------KRDAIADCISEILEGERGK 423 (464)
Q Consensus 358 ~HgG~----~s~~eal~~GvP~v~~P~~~-DQ~~na~rl--~~~-~G~g~~l~~~------~~~~l~~~i~~ll~~~~~~ 423 (464)
.=.|. .++.-+ ..-+|++.+|... +-......+ .++ -|+.+..=.. ++.-++..|-. +.|+
T Consensus 67 a~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~--- 141 (169)
T 3trh_A 67 AAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIA-LQDK--- 141 (169)
T ss_dssp EEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCH---
T ss_pred EECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCCH---
Confidence 66664 233333 4468999999864 221222222 222 0332111122 33333333322 3565
Q ss_pred HHHHHHHHHHHHHHHH
Q 012412 424 ELRRNAGKWRKLAKEA 439 (464)
Q Consensus 424 ~~~~~a~~l~~~~~~~ 439 (464)
.++++.+.+++..++.
T Consensus 142 ~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 142 SIAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888888888764
No 217
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=39.55 E-value=1.1e+02 Score=22.36 Aligned_cols=106 Identities=12% Similarity=0.214 Sum_probs=59.4
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
..++.....+...++..++.++....+. +.+ +.+.+ ...++.+.++ +|.. .|. .+.+.
T Consensus 9 dd~~~~~~~l~~~l~~~g~~v~~~~~~~--~al-~~l~~---~~~dlvllD~~~p~~--------------~g~-~~~~~ 67 (122)
T 3gl9_A 9 DDSAVLRKIVSFNLKKEGYEVIEAENGQ--IAL-EKLSE---FTPDLIVLXIMMPVM--------------DGF-TVLKK 67 (122)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEESSHH--HHH-HHHTT---BCCSEEEECSCCSSS--------------CHH-HHHHH
T ss_pred eCCHHHHHHHHHHHHHCCcEEEEeCCHH--HHH-HHHHh---cCCCEEEEeccCCCC--------------cHH-HHHHH
Confidence 4456666777778888888766432221 111 11111 2234444443 1111 122 23333
Q ss_pred HH-----hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhc
Q 012412 369 LS-----LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILE 418 (464)
Q Consensus 369 l~-----~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~ 418 (464)
+. ..+|++++--.. ......+..+. |+--.+. .++.++|..++++++.
T Consensus 68 l~~~~~~~~~pii~~s~~~-~~~~~~~~~~~-Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 68 LQEKEEWKRIPVIVLTAKG-GEEDESLALSL-GARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp HHTSTTTTTSCEEEEESCC-SHHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHHHC
T ss_pred HHhcccccCCCEEEEecCC-chHHHHHHHhc-ChhhhccCCCCHHHHHHHHHHHhc
Confidence 42 367888776433 34455666677 7766666 8999999999999875
No 218
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=39.34 E-value=43 Score=32.13 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=33.0
Q ss_pred EEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCccccc
Q 012412 16 CLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFFYK 54 (464)
Q Consensus 16 il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~~~ 54 (464)
+++...++.|-..-++.+|...+. .|..|.|++.+...+
T Consensus 203 ~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 567888899999999999999886 589999999986544
No 219
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=39.29 E-value=44 Score=29.29 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|.++++.++.| + =.++|+.|+++|++|.++..
T Consensus 30 k~vlITGas~g-I--G~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 30 KNVLITGASKG-I--GAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 45666666543 3 25889999999999998886
No 220
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=39.28 E-value=29 Score=29.06 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
||||+. |+.|.+- ..|+++|.++||+|+.++...
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 466654 3334443 478899999999999998753
No 221
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=39.09 E-value=51 Score=24.84 Aligned_cols=43 Identities=9% Similarity=-0.133 Sum_probs=32.6
Q ss_pred EEE-EEcCCCccCh--HHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 15 HCL-VLTYPGQGHI--NPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 15 ~il-~~~~~~~GH~--~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
|++ +++.+.+|+- .-.+.+|.++...||+|.++......-.+.
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~~~~ 48 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLL 48 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGC
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHHHHh
Confidence 566 4777777876 556788999998999999988876655555
No 222
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=39.07 E-value=65 Score=28.62 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=24.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| +- .++|+.|+++|++|.++...
T Consensus 48 k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 48 KNVLITGGDSG-IG--RAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 56667766543 22 57899999999999988764
No 223
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=38.89 E-value=35 Score=31.07 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=26.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.+||||+|+-.+..+ ....++|.++||+|..+.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 467899999777543 345678888899998777643
No 224
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=38.81 E-value=47 Score=29.38 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=23.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| + =.++|+.|+++|++|.++..
T Consensus 26 k~~lVTGas~G-I--G~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG-I--GLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56667666543 2 25789999999999998865
No 225
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=38.36 E-value=54 Score=28.20 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=23.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|.++++.++.| +- .++|+.|+++|++|.++..
T Consensus 5 k~~lVTGas~g-IG--~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 5 KSALVTGASRG-IG--RSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CEEEETTCSSH-HH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh-HH--HHHHHHHHHCCCEEEEEeC
Confidence 56667666542 32 5789999999999988765
No 226
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=38.34 E-value=86 Score=26.54 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=53.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhC--CCeEEEEeCcccccccccCCCCCCceEEEccC-CCCCCCCCCccCHHHHHH
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHK--GIKVTLVTTRFFYKSLHRDSSSSSIPLEAISD-GYDEGGYAQAESIEAYLE 90 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~ 90 (464)
+||+++..+..+ -+.+|.+++.+. +|+|..+.+........+.....|+.+..++. .+.. -.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~--------r~---- 65 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDS--------RE---- 65 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSS--------HH----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccc--------hh----
Confidence 478766555533 367777777765 58887666543211111001155777776542 1111 00
Q ss_pred HHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch-hhHHHHHHHcCCccEEEecch
Q 012412 91 RFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQS 144 (464)
Q Consensus 91 ~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~~ 144 (464)
. .. .++++.+.+. .+ |+||+-.+. .....+-..+...++-+.++.
T Consensus 66 ~----~~---~~~~~~l~~~-~~-Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 66 A----YD---RELIHEIDMY-AP-DVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp H----HH---HHHHHHHGGG-CC-SEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred h----cc---HHHHHHHHhc-CC-CEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 0 01 1223333322 44 999987664 334445555666677665443
No 227
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=38.20 E-value=40 Score=25.03 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEE
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTL 46 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~ 46 (464)
.|||++++..|.|+-.-.-.+-+.+.++|.++.+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i 37 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATI 37 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEE
Confidence 4789999999888886666777778888886543
No 228
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=38.03 E-value=35 Score=30.09 Aligned_cols=33 Identities=30% Similarity=0.489 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
++|||+. |+ |.+- ..|++.|.++||+|+.++..
T Consensus 3 ~~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIA--GC-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEE--CC-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEE--CC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4678876 24 6444 46789999999999999864
No 229
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=37.69 E-value=80 Score=27.83 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| + =.++|+.|+++|++|.++..
T Consensus 30 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 30 PVAIVTGGRRG-I--GLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEecCCCH-H--HHHHHHHHHHCCCeEEEEeC
Confidence 56666666543 2 25789999999999999874
No 230
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=37.64 E-value=1.1e+02 Score=28.35 Aligned_cols=108 Identities=11% Similarity=0.127 Sum_probs=61.5
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCC--CeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSSD--QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGC 355 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~ 355 (464)
..+..|..| ++ +..+.++.+.+ .+++-++..+. .-...+.++. ++. -|-...+++...|+-.
T Consensus 8 ~rv~VvG~G-~g-------~~h~~a~~~~~~~~elvav~~~~~--~~a~~~a~~~----gv~--~~~~~~~l~~~~D~v~ 71 (372)
T 4gmf_A 8 QRVLIVGAK-FG-------EMYLNAFMQPPEGLELVGLLAQGS--ARSRELAHAF----GIP--LYTSPEQITGMPDIAC 71 (372)
T ss_dssp EEEEEECST-TT-------HHHHHTTSSCCTTEEEEEEECCSS--HHHHHHHHHT----TCC--EESSGGGCCSCCSEEE
T ss_pred CEEEEEehH-HH-------HHHHHHHHhCCCCeEEEEEECCCH--HHHHHHHHHh----CCC--EECCHHHHhcCCCEEE
Confidence 345666555 22 23566776654 45555554331 1123333332 222 2456678888888844
Q ss_pred ee----ccCCh--hHHHHHHHhCCcEec-cCCccchhhH-HHHHHhHhcceeecc
Q 012412 356 FV----THCGW--NSTMEALSLGVPMVA-MPQWSDQSTN-AKYILDVWKTGLKFP 402 (464)
Q Consensus 356 vI----~HgG~--~s~~eal~~GvP~v~-~P~~~DQ~~n-a~rl~~~~G~g~~l~ 402 (464)
+. +|++. --..+||.+|+++++ -|+..|+-.- .+..++. |+=..+.
T Consensus 72 i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~-g~~~~v~ 125 (372)
T 4gmf_A 72 IVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQ-GCCYWIN 125 (372)
T ss_dssp ECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHH-TCCEEEE
T ss_pred EECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHc-CCEEEEc
Confidence 44 46664 457899999999999 8886654432 3333445 6666664
No 231
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=37.54 E-value=48 Score=28.93 Aligned_cols=41 Identities=20% Similarity=0.117 Sum_probs=27.1
Q ss_pred CCCCCcEEEEEcCCCc--cChHHHHH-HHHHHHhCCCeEEEEeC
Q 012412 9 TSCKLAHCLVLTYPGQ--GHINPLLQ-FSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~--GH~~p~l~-la~~L~~rGh~V~~~~~ 49 (464)
..+.+|||+++..+.+ |....+.. +++.+.+.|++|.++--
T Consensus 30 ~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 30 FSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred ccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3455789998777655 44444444 56667778999887653
No 232
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=37.46 E-value=1.4e+02 Score=22.93 Aligned_cols=107 Identities=8% Similarity=0.095 Sum_probs=63.9
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
-..+.....+...|+..|+..+.....+. +.+ +-+.+ .+.++.+.+| .|... |+ .+.+.
T Consensus 19 DD~~~~r~~l~~~L~~~G~~~v~~a~~g~-~al-~~~~~---~~~DlillD~~MP~md--------------G~-el~~~ 78 (134)
T 3to5_A 19 DDFSTMRRIVKNLLRDLGFNNTQEADDGL-TAL-PMLKK---GDFDFVVTDWNMPGMQ--------------GI-DLLKN 78 (134)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEEEESSHH-HHH-HHHHH---HCCSEEEEESCCSSSC--------------HH-HHHHH
T ss_pred eCCHHHHHHHHHHHHHcCCcEEEEECCHH-HHH-HHHHh---CCCCEEEEcCCCCCCC--------------HH-HHHHH
Confidence 45666777777788888987554432221 111 11111 3355666665 34321 22 22233
Q ss_pred HH-----hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhc
Q 012412 369 LS-----LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILE 418 (464)
Q Consensus 369 l~-----~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~ 418 (464)
+. ..+|++++--.. ......+..+. |+--.+. .++.++|.++|+++++
T Consensus 79 ir~~~~~~~ipvI~lTa~~-~~~~~~~~~~~-Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 79 IRADEELKHLPVLMITAEA-KREQIIEAAQA-GVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHSTTTTTCCEEEEESSC-CHHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHCC
T ss_pred HHhCCCCCCCeEEEEECCC-CHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHHHHh
Confidence 32 468988876444 44455666677 8776776 8999999999999874
No 233
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=37.40 E-value=98 Score=26.85 Aligned_cols=37 Identities=14% Similarity=0.136 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccCh-HHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHI-NPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~-~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|||+++...+.-++ ..+...++.+..-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 69998777766655 46666788777668888887754
No 234
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=37.35 E-value=55 Score=28.85 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=24.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 11 k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARG-M--GRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEeCC
Confidence 56666666643 2 257899999999999988763
No 235
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=37.09 E-value=31 Score=31.04 Aligned_cols=42 Identities=14% Similarity=0.133 Sum_probs=24.7
Q ss_pred CCCCCCCCc-EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 6 KKPTSCKLA-HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 6 ~~~~~~~~~-~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.+|+.+.++ +|++. |+.|.+- ..++++|.++||+|+.++...
T Consensus 3 ~~m~~~~m~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 3 HGMEENGMKSKILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp ------CCCCCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred CcccccCCCCeEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 344444443 56554 3445554 467899999999999988654
No 236
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=36.99 E-value=27 Score=31.65 Aligned_cols=46 Identities=15% Similarity=0.249 Sum_probs=33.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEE
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEA 69 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (464)
|||+|+-.|+.|- .+|..|.++||+|+++.... .+.+. ..|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~----~~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIA----GNGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHH----HTCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHH----hCCCEEEc
Confidence 5899997777773 46788999999999999865 35555 44565544
No 237
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=36.92 E-value=1.2e+02 Score=26.27 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=26.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+.+++.++.|= =.++|+.|+++|++|.+....
T Consensus 12 K~alVTGas~GI---G~aia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 12 QQVLVTGGSSGI---GAAIAMQFAELGAEVVALGLD 44 (242)
T ss_dssp CEEEEETTTSHH---HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCHH---HHHHHHHHHHCCCEEEEEeCC
Confidence 688888887652 267899999999999988754
No 238
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=36.81 E-value=2.8e+02 Score=29.02 Aligned_cols=81 Identities=12% Similarity=0.110 Sum_probs=48.9
Q ss_pred eeccCChhHHHHHHHhC-Cc--E--eccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhcCCchHHHHHHHH
Q 012412 356 FVTHCGWNSTMEALSLG-VP--M--VAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILEGERGKELRRNAG 430 (464)
Q Consensus 356 vI~HgG~~s~~eal~~G-vP--~--v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~~~~~~~~~~~a~ 430 (464)
++.||-.+.+.|.++-. .| + +.+|-.++-..-...++.. | ++.+.|.+++.+++....+..+++..+
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~-g-------ld~~~Iv~~a~~~l~~~~~~~~~~~~~ 798 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN-D-------MDRYALQAAALKLIDADKYADKIDELN 798 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT-T-------CSHHHHHHHHHHHHHTTTTHHHHHHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh-C-------cCHHHHHHHHHHHcchhhHHHHHHHHH
Confidence 44676667777777665 33 4 3355444333444555555 4 789999999999887543445666666
Q ss_pred HHHHHHHHHHHcCC
Q 012412 431 KWRKLAKEAVAKGG 444 (464)
Q Consensus 431 ~l~~~~~~~~~~gg 444 (464)
....+.++.+.+-|
T Consensus 799 ~~~~~~~~~~~~~g 812 (845)
T 3ahc_A 799 AFRKKAFQFAVDNG 812 (845)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhC
Confidence 55555555443333
No 239
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=36.65 E-value=74 Score=23.74 Aligned_cols=41 Identities=12% Similarity=0.000 Sum_probs=31.3
Q ss_pred CCCCCCcEEEEEcCCCccChH-HHHHHHHHHHhCCCeEEEEe
Q 012412 8 PTSCKLAHCLVLTYPGQGHIN-PLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~-p~l~la~~L~~rGh~V~~~~ 48 (464)
....+++||++++..|.|.-. -.-.|-+.+.+.|.++.+-.
T Consensus 16 ~~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 16 YFQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CCSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred hhcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 344567899999999999877 46777788888998764443
No 240
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=36.49 E-value=41 Score=33.22 Aligned_cols=41 Identities=10% Similarity=-0.048 Sum_probs=30.7
Q ss_pred CCCCcEEEEEcCCCccC--hHHHHHHHHH--HHhCCCeEEEEeCc
Q 012412 10 SCKLAHCLVLTYPGQGH--INPLLQFSRR--LQHKGIKVTLVTTR 50 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH--~~p~l~la~~--L~~rGh~V~~~~~~ 50 (464)
..++|||++++....+| -.-+..+++. |.++||+|++++..
T Consensus 202 ~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 35679999877665444 3456788999 77789999999864
No 241
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=36.40 E-value=40 Score=30.68 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.++|||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 346799999666666 56889999999999987653
No 242
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=36.24 E-value=31 Score=29.70 Aligned_cols=30 Identities=10% Similarity=0.189 Sum_probs=25.5
Q ss_pred cccccceeccCChhHHHHHHHhCCcEeccCCcc
Q 012412 350 HEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 350 ~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
.+++ +|+.||.......- .++|+|-++..+
T Consensus 63 ~~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 63 RCDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 4788 99999999998875 689999999764
No 243
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=36.12 E-value=35 Score=30.55 Aligned_cols=37 Identities=8% Similarity=0.072 Sum_probs=28.0
Q ss_pred cEEEEEcCCCccC---hHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGH---INPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH---~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|||+|+..+.... ......++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5899888774321 234567999999999999998874
No 244
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=36.00 E-value=72 Score=28.03 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=24.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 11 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 11 KVVLVTGGARG-Q--GRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCCCh-H--HHHHHHHHHHCCCeEEEEccc
Confidence 56666666543 2 257899999999999988653
No 245
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=35.77 E-value=1.1e+02 Score=25.48 Aligned_cols=134 Identities=13% Similarity=0.055 Sum_probs=72.1
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-----cChHHhhccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-----CPQLEVLAHEAT 353 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-----~p~~~ll~~~~~ 353 (464)
.+++.-.|+.... ....+++.|.+.+..+-++........+..+..+. ..++++..-| +.+-.+...+|+
T Consensus 10 ~IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~~~~--l~~~v~~~~~~~~~~~~hi~l~~~aD~ 84 (194)
T 1p3y_1 10 KLLIGICGSISSV---GISSYLLYFKSFFKEIRVVMTKTAEDLIPAHTVSY--FCDHVYSEHGENGKRHSHVEIGRWADI 84 (194)
T ss_dssp EEEEEECSCGGGG---GTHHHHHHHTTTSSEEEEEECHHHHHHSCHHHHGG--GSSEEECTTCSSSCCCCHHHHHHHCSE
T ss_pred EEEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHH--hcCCEeccccccCCCcCcccccccCCE
Confidence 4566666666532 12344555566677666555443323333322222 3445321112 334456566665
Q ss_pred cceeccCChhHHH-------------HHHHhCCcEeccCCccc-------hhhHHHHHHhHhcceeecc--C--------
Q 012412 354 GCFVTHCGWNSTM-------------EALSLGVPMVAMPQWSD-------QSTNAKYILDVWKTGLKFP--I-------- 403 (464)
Q Consensus 354 ~~vI~HgG~~s~~-------------eal~~GvP~v~~P~~~D-------Q~~na~rl~~~~G~g~~l~--~-------- 403 (464)
.+|.=+-.||+. -++..++|+++.|-.++ -..|-.+|.+. |+=+.-+ .
T Consensus 85 -~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~iv~p~~g~~f~lacg 162 (194)
T 1p3y_1 85 -YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GHIVIEPVEIMAFEIATG 162 (194)
T ss_dssp -EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TCEECCCBCCC-------
T ss_pred -EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHC-CCEEECCCCCcccccccC
Confidence 244444444432 23668999999996442 14577788887 8754433 3
Q ss_pred --------cCHHHHHHHHHHHhcC
Q 012412 404 --------VKRDAIADCISEILEG 419 (464)
Q Consensus 404 --------~~~~~l~~~i~~ll~~ 419 (464)
.+.++|.+.+.+.+.+
T Consensus 163 ~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 163 TRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp -----CBCCCHHHHHHHHHHHCC-
T ss_pred CcCcCCCCCCHHHHHHHHHHHhcc
Confidence 2567777777777754
No 246
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=35.74 E-value=36 Score=29.78 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=29.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.|.|..-||-|-..-...||..|+++|++|.++=..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 345666777799999999999999999999987554
No 247
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=35.54 E-value=25 Score=31.60 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+|||.|+-.|..| ..+|..|.++||+|+++...
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEECC
Confidence 4799998665545 35788999999999998763
No 248
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=35.51 E-value=62 Score=31.57 Aligned_cols=41 Identities=17% Similarity=0.004 Sum_probs=34.4
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhC-CCeEEEEeCccccccc
Q 012412 16 CLVLTYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFFYKSL 56 (464)
Q Consensus 16 il~~~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~~~~~ 56 (464)
+++...++.|-..-++.+|..++.+ |..|.|++.+...+.+
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 5677788889999999999999887 9999999998665433
No 249
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=35.45 E-value=1.9e+02 Score=24.21 Aligned_cols=50 Identities=22% Similarity=0.298 Sum_probs=37.9
Q ss_pred HHhCCcEeccCCc----cchhhHHHHHHhHhcceeecc-------------CcCHHHHHHHHHHHhcC
Q 012412 369 LSLGVPMVAMPQW----SDQSTNAKYILDVWKTGLKFP-------------IVKRDAIADCISEILEG 419 (464)
Q Consensus 369 l~~GvP~v~~P~~----~DQ~~na~rl~~~~G~g~~l~-------------~~~~~~l~~~i~~ll~~ 419 (464)
+..++|+|+.|-. ...+.|..+|.+. |+=+..+ ..+.+.|.+.+.++|++
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~-G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRLMAT-KNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHHHTS-TTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHHHHC-CCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 5679999999854 3566699999999 8765543 14558899999999876
No 250
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=35.27 E-value=25 Score=30.07 Aligned_cols=109 Identities=11% Similarity=0.019 Sum_probs=57.2
Q ss_pred CcEEEEEcCCCccChHH----HHHHHHHHHhC-CCeEEEEeCcccc-cccccCCCCCCce-EEEccCCCCCCCCCCccCH
Q 012412 13 LAHCLVLTYPGQGHINP----LLQFSRRLQHK-GIKVTLVTTRFFY-KSLHRDSSSSSIP-LEAISDGYDEGGYAQAESI 85 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p----~l~la~~L~~r-Gh~V~~~~~~~~~-~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 85 (464)
+.+|+++.-...|.+++ ++..|++|++. |-+|+.++-.... +...+.. ..|.. .+.+.+.. +. ....
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~-~~Gad~v~~v~~~~----~~-~~~~ 76 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQIL-PYGVDKLHVFDAEG----LY-PYTS 76 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHG-GGTCSEEEEEECGG----GS-SCCH
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHH-hcCCCEEEEecCcc----cc-cCCH
Confidence 44688888776676654 47778888774 7677666543321 1111100 11221 22222110 00 0111
Q ss_pred HHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch---hhHHHHHHHcCCccEEE
Q 012412 86 EAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL---LWALDVAKKFGLLGAPF 140 (464)
Q Consensus 86 ~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~---~~~~~~A~~~giP~v~~ 140 (464)
..+. ..+..++++. .| |+|++-... ..+..+|.++++|.+.-
T Consensus 77 ~~~a--------~~l~~~i~~~----~p-~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 77 LPHT--------SILVNLFKEE----QP-QICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp HHHH--------HHHHHHHHHH----CC-SEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred HHHH--------HHHHHHHHhc----CC-CEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 1111 2233444543 34 999987655 33678899999998763
No 251
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=35.27 E-value=69 Score=27.65 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCc-----------cChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQ-----------GHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~-----------GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+|||++..... -...=+....+.|.+.|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 458987655321 134566667788889999999999854
No 252
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=35.17 E-value=1.3e+02 Score=26.11 Aligned_cols=32 Identities=6% Similarity=0.065 Sum_probs=24.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| + =.++|+.|+++|++|.++..
T Consensus 12 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN-L--GALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEec
Confidence 56677766654 3 36789999999999998764
No 253
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=35.16 E-value=35 Score=31.12 Aligned_cols=38 Identities=21% Similarity=0.322 Sum_probs=24.3
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+..++++||+.- +.|-+- ..|++.|.++||+|+.+...
T Consensus 23 ~~~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 23 MEKDRKRILITG--GAGFVG--SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp ----CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEEc--CccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 345567777653 334443 46788999999999998753
No 254
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=35.13 E-value=78 Score=27.52 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=24.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++. -+- .++|+.|+++|++|.++...
T Consensus 29 k~vlVTGas~-gIG--~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 29 KVVVITGASQ-GIG--AGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CEEEESSCSS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCC-HHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5666766553 333 47899999999999988753
No 255
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=34.96 E-value=38 Score=30.51 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+++|++. |+.|.+-. .++++|.++||+|+.++...
T Consensus 4 ~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIY--GGTGYIGK--FMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEE--TTTSTTHH--HHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEE--cCCchhHH--HHHHHHHhCCCcEEEEECCc
Confidence 4566655 44455543 57899999999999988753
No 256
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=34.95 E-value=3e+02 Score=26.06 Aligned_cols=137 Identities=15% Similarity=0.032 Sum_probs=75.2
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccc-cccc
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHE-ATGC 355 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~-~~~~ 355 (464)
..+.|-|-+||.+ +....++....|+.+|..+-+-+.+. ...|+.+.+. +-+.. -... ++
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa--HR~p~~~~~~------------~~~~~-~~g~~~v-- 324 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA--HKGPDETLRI------------KAEYE-GDGIPTV-- 324 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHHHHH------------HHHHH-TTCCCEE--
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec--cCCHHHHHHH------------HHHHH-HCCCCeE--
Confidence 4467888888876 67888899999999998876666554 3334432211 10000 0113 35
Q ss_pred eeccCCh----hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhc--ceeecc----CcCHHHHHHHHHHHhcCCchHHH
Q 012412 356 FVTHCGW----NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWK--TGLKFP----IVKRDAIADCISEILEGERGKEL 425 (464)
Q Consensus 356 vI~HgG~----~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G--~g~~l~----~~~~~~l~~~i~~ll~~~~~~~~ 425 (464)
+|.=+|. .++.-++ .-+|++.+|....-......+.-. . -|+-+. ..++.-++..|. -+.|+ .+
T Consensus 325 iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~v-qmp~g~pvatv~~~~nAa~~A~~Il-~~~~~---~l 398 (425)
T 2h31_A 325 FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSL-RLPSGLGCSTVLSPEGSAQFAAQIF-GLSNH---LV 398 (425)
T ss_dssp EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTS-SCCSSCCCEECCCHHHHHHHHHHHH-HTTCH---HH
T ss_pred EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHh-cCCCCCceEEecCchHHHHHHHHHH-ccCCH---HH
Confidence 6665553 3444444 589999999853211222222222 2 222222 334444444443 34565 77
Q ss_pred HHHHHHHHHHHHH
Q 012412 426 RRNAGKWRKLAKE 438 (464)
Q Consensus 426 ~~~a~~l~~~~~~ 438 (464)
+++.+..+.....
T Consensus 399 ~~kl~~~~~~~~~ 411 (425)
T 2h31_A 399 WSKLRASILNTWI 411 (425)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776664
No 257
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=34.72 E-value=33 Score=28.88 Aligned_cols=34 Identities=6% Similarity=0.208 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|||++.- +.|-+- ..++++|.++||+|+.+....
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 4666553 334333 578999999999999998753
No 258
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=34.66 E-value=44 Score=29.61 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=27.0
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
+.....++||++.-.--=-..-+-.+...++++|++|++++-
T Consensus 2 ~~~~~~~rvLvv~aHPDDe~l~~GGtia~~~~~G~~V~vv~~ 43 (270)
T 3dfi_A 2 LQDADRTRILAISPHLDDAVLSVGASLAQAEQDGGKVTVFTV 43 (270)
T ss_dssp ----CCSEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCCCEEEEEeCCchHHHhhHHHHHHHHhCCCeEEEEEE
Confidence 334456789976655544455666666677789999998773
No 259
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=34.64 E-value=22 Score=32.12 Aligned_cols=35 Identities=11% Similarity=0.045 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
..++||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 5 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 345799999655544 46889999999999988653
No 260
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=34.42 E-value=77 Score=26.77 Aligned_cols=39 Identities=21% Similarity=0.221 Sum_probs=31.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+.+-|+|.-..+.|--.-+..|++.|..+|+.|...-.+
T Consensus 5 ~g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~v~~~~~p 43 (213)
T 4edh_A 5 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREP 43 (213)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CceEEEEEcCCCCCHHHHHHHHHHHHHHcCCCcccccCC
Confidence 345566777778899999999999999999999655444
No 261
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=34.40 E-value=45 Score=27.40 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccChHHHHH-HHHHHHh-CCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQ-FSRRLQH-KGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~-la~~L~~-rGh~V~~~~~~ 50 (464)
|+||+++-.+.+|+..-+.. +++.|.+ .|++|.++.-.
T Consensus 4 M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 4 MGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp CEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 57898877777788765544 5777777 89999887653
No 262
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=34.28 E-value=65 Score=30.64 Aligned_cols=37 Identities=5% Similarity=-0.081 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.-|+++++.++. -+-...+++++|+++|++|.++...
T Consensus 59 ~gK~aLVTGass-GIG~A~aia~ala~~Ga~Vi~~~r~ 95 (418)
T 4eue_A 59 GPKKVLIVGASS-GFGLATRISVAFGGPEAHTIGVSYE 95 (418)
T ss_dssp CCSEEEEESCSS-HHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHHhCCCEEEEEecC
Confidence 346777777664 4666666899999999999888754
No 263
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=34.25 E-value=50 Score=25.94 Aligned_cols=43 Identities=12% Similarity=0.107 Sum_probs=34.6
Q ss_pred EEE-EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 15 HCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 15 ~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
|++ +++.+..-.+.+.+.+|...+..|++|+++.+......+.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~ 52 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAIT 52 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTB
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHh
Confidence 565 4666667888899999999999999999999977665555
No 264
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=34.22 E-value=2e+02 Score=27.51 Aligned_cols=146 Identities=13% Similarity=0.026 Sum_probs=76.0
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccce
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~v 356 (464)
+++++.+..|..+ .+.++.|.+.|..+.++-.. +.+++.+.. ...++.+..---....|..+++ |
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~-----~~~~~~~l~-~~~~i~~~~~~~~~~~l~~~~l--V 76 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT-----FIPQFTVWA-NEGMLTLVEGPFDETLLDSCWL--A 76 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS-----CCHHHHHHH-TTTSCEEEESSCCGGGGTTCSE--E
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC-----CCHHHHHHH-hcCCEEEEECCCCccccCCccE--E
Confidence 5667778777544 34456666678887766532 222332210 1234544421112344567787 8
Q ss_pred eccCChhH-----HHHHHHhCCcEe--ccCCccchhhHHHHHHhH-hcceeeccCcC---HHHHHHHHHHHhcCCchHHH
Q 012412 357 VTHCGWNS-----TMEALSLGVPMV--AMPQWSDQSTNAKYILDV-WKTGLKFPIVK---RDAIADCISEILEGERGKEL 425 (464)
Q Consensus 357 I~HgG~~s-----~~eal~~GvP~v--~~P~~~DQ~~na~rl~~~-~G~g~~l~~~~---~~~l~~~i~~ll~~~~~~~~ 425 (464)
|...|... ..+|-..|+|+- --|-..+...-+ .+.+. .-+|++-...+ +..|++.|++.|.+..+ .+
T Consensus 77 i~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~~~~-~~ 154 (457)
T 1pjq_A 77 IAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQHLG-QV 154 (457)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTTHH-HH
T ss_pred EEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEECCCCChHHHHHHHHHHHHhcchhHH-HH
Confidence 88888654 455667899973 233222211100 00112 03444411222 46777777777755322 66
Q ss_pred HHHHHHHHHHHHHH
Q 012412 426 RRNAGKWRKLAKEA 439 (464)
Q Consensus 426 ~~~a~~l~~~~~~~ 439 (464)
-+.+.++++++++.
T Consensus 155 ~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 155 ARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 67777777777654
No 265
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=34.21 E-value=38 Score=25.23 Aligned_cols=40 Identities=13% Similarity=0.042 Sum_probs=24.1
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (464)
...+.+||++++.+|.+--.-.-.+=++..++|.+|.+..
T Consensus 2 ~~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 2 NASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp ---CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 3456889998887775443333444455555788887755
No 266
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=34.14 E-value=25 Score=29.46 Aligned_cols=31 Identities=3% Similarity=0.140 Sum_probs=26.1
Q ss_pred ccccccceeccCChhHHHHHHHhCCcEeccCCcc
Q 012412 349 AHEATGCFVTHCGWNSTMEALSLGVPMVAMPQWS 382 (464)
Q Consensus 349 ~~~~~~~vI~HgG~~s~~eal~~GvP~v~~P~~~ 382 (464)
..+++ +|+.||........ .++|+|-++..+
T Consensus 50 ~~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 45778 99999999998875 689999999765
No 267
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=34.13 E-value=97 Score=27.30 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=23.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| +- .++|+.|+++|++|.++...
T Consensus 9 k~vlVTGas~G-IG--~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 9 KIAIVTGASSG-IG--RAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp CEEEESSTTSH-HH--HHHHHHHHHTTCEEEECCSC
T ss_pred CEEEEECCCcH-HH--HHHHHHHHHCCCEEEEEECC
Confidence 56677766543 22 57899999999998887653
No 268
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=34.13 E-value=49 Score=29.16 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
-|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 30 ~k~vlVTGas~G-I--G~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG-L--GEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 367777776654 2 257899999999999888654
No 269
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=33.88 E-value=28 Score=30.54 Aligned_cols=42 Identities=17% Similarity=0.146 Sum_probs=33.9
Q ss_pred CCcEEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEeCcccc
Q 012412 12 KLAHCLVLTYP---GQGHINPLLQFSRRLQHKGIKVTLVTTRFFY 53 (464)
Q Consensus 12 ~~~~il~~~~~---~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~ 53 (464)
.+||.+|++.+ +-|--.-.-.++..|..||++|+..=-..+.
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCce
Confidence 35799998887 4467788899999999999999987765554
No 270
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=33.77 E-value=1.4e+02 Score=22.05 Aligned_cols=108 Identities=13% Similarity=0.080 Sum_probs=61.0
Q ss_pred cCCHHHHHHHHHHHhhCC-CeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cChHHhhccccccceeccCChhHHHH
Q 012412 290 ELKAEEMEELAWGLKSSD-QHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCFVTHCGWNSTME 367 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ll~~~~~~~vI~HgG~~s~~e 367 (464)
...+.....+...|+..+ +.+......... + +.+.+ .+..+.+.++ .|... |...+.+
T Consensus 21 dd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a--~-~~l~~---~~~dlvi~D~~l~~~~--------------g~~~~~~ 80 (135)
T 3snk_A 21 SSDPNFKRDVATRLDALAIYDVRVSETDDFL--K-GPPAD---TRPGIVILDLGGGDLL--------------GKPGIVE 80 (135)
T ss_dssp CSCHHHHHHHHHHHHHTSSEEEEEECGGGGG--G-CCCTT---CCCSEEEEEEETTGGG--------------GSTTHHH
T ss_pred cCCHHHHHHHHHHHhhcCCeEEEEeccHHHH--H-HHHhc---cCCCEEEEeCCCCCch--------------HHHHHHH
Confidence 456777778888888888 776644332211 1 11111 3345566653 34322 1111111
Q ss_pred H--HHhCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 368 A--LSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 368 a--l~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
. ....+|++++--..+ .....+..+. |+--.+. .++.++|..+|++++..
T Consensus 81 l~~~~~~~~ii~~s~~~~-~~~~~~~~~~-g~~~~l~KP~~~~~L~~~i~~~~~~ 133 (135)
T 3snk_A 81 ARALWATVPLIAVSDELT-SEQTRVLVRM-NASDWLHKPLDGKELLNAVTFHDTG 133 (135)
T ss_dssp HHGGGTTCCEEEEESCCC-HHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHTC--
T ss_pred HHhhCCCCcEEEEeCCCC-HHHHHHHHHc-CcHhhccCCCCHHHHHHHHHHHhcc
Confidence 1 122688888764443 3344555667 7766666 89999999999988754
No 271
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=33.60 E-value=32 Score=28.75 Aligned_cols=36 Identities=8% Similarity=0.067 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCccCh-HHHHHHHHHHHhCCCeEEEEe
Q 012412 13 LAHCLVLTYPGQGHI-NPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 13 ~~~il~~~~~~~GH~-~p~l~la~~L~~rGh~V~~~~ 48 (464)
|||||++..+...+- .-..++++.+.+.|++|++.-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 468997666555432 345566777777788877764
No 272
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=33.53 E-value=93 Score=27.47 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=24.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 29 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 29 PVALITGAGSG-I--GRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56677766643 2 257899999999999988754
No 273
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=33.51 E-value=80 Score=26.98 Aligned_cols=42 Identities=10% Similarity=0.040 Sum_probs=29.1
Q ss_pred CCCCcEEEEEcC-----CCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 10 SCKLAHCLVLTY-----PGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 10 ~~~~~~il~~~~-----~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
-+.++||+|+.. ++. ...=+....+.|.+.|++|++++....
T Consensus 3 ~~~m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g~ 49 (232)
T 1vhq_A 3 LITMKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDKQ 49 (232)
T ss_dssp ---CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSSB
T ss_pred cccCCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 344678998777 443 455566667889899999999998543
No 274
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=33.42 E-value=38 Score=30.72 Aligned_cols=33 Identities=9% Similarity=0.088 Sum_probs=27.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
|||+++..+ -...+++++.++||+|.++.....
T Consensus 3 m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 3 VRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp SEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred eEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 689988776 467899999999999999887643
No 275
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=33.37 E-value=40 Score=30.54 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+|+||+.- +.|.+- ..|++.|.++||+|+.++..
T Consensus 12 ~~M~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLG--ATGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 356777663 334443 46788999999999998864
No 276
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=33.34 E-value=31 Score=30.15 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
.+|++++.++.-- -=-+.+|+.|+++|++|+++..
T Consensus 59 ~~v~VlcG~GNNG-GDGlv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNG-GDGLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHH-HHHHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCH-HHHHHHHHHHHHCCCeEEEEEc
Confidence 4899988877511 1237899999999999999864
No 277
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=33.30 E-value=41 Score=30.38 Aligned_cols=36 Identities=22% Similarity=0.202 Sum_probs=27.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
..+++||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 3457899998655444 56889999999999987653
No 278
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=33.30 E-value=32 Score=31.21 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+|++++.+|. .--=-+.+|+.|+++|++|+++...
T Consensus 133 ~~vlVlcG~GN-NGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHV-KGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSH-HHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCC-CHHHHHHHHHHHHHCCCcEEEEEec
Confidence 48999888775 1122378999999999999998653
No 279
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=33.22 E-value=38 Score=27.68 Aligned_cols=82 Identities=11% Similarity=0.044 Sum_probs=47.4
Q ss_pred eEEEEecccc---cCCHHHHHHHHHHHhhCCCeEEEEE-cCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccc
Q 012412 280 VVYVSYGSFV---ELKAEEMEELAWGLKSSDQHFLWVV-RESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGC 355 (464)
Q Consensus 280 ~v~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~ 355 (464)
+-.++.|+.. ......-..+...|++.|..+.... -+++.+.+.+.+ ...+.++|+
T Consensus 6 v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l------------------~~a~~~~Dl-- 65 (172)
T 3kbq_A 6 ASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAF------------------RVALEVSDL-- 65 (172)
T ss_dssp EEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHH------------------HHHHHHCSE--
T ss_pred EEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHH------------------HHHHhcCCE--
Confidence 4566667643 2223444556777888888766432 122212221211 233556888
Q ss_pred eeccCChh-----HHHHHHH--hCCcEeccCCc
Q 012412 356 FVTHCGWN-----STMEALS--LGVPMVAMPQW 381 (464)
Q Consensus 356 vI~HgG~~-----s~~eal~--~GvP~v~~P~~ 381 (464)
+|+-||.| -+.||++ .|++++..|-.
T Consensus 66 VittGG~g~~~~D~T~ea~a~~~~~~l~~~~e~ 98 (172)
T 3kbq_A 66 VVSSGGLGPTFDDMTVEGFAKCIGQDLRIDEDA 98 (172)
T ss_dssp EEEESCCSSSTTCCHHHHHHHHHTCCCEECHHH
T ss_pred EEEcCCCcCCcccchHHHHHHHcCCCeeeCHHH
Confidence 99999987 3567764 78888776643
No 280
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=33.17 E-value=37 Score=29.90 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+||||+.- + |.+-. .|++.|.++||+|+.++...
T Consensus 5 ~~~ilVtG--a-G~iG~--~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTAR--VLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHHH--HHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHHH--HHHHHHHHCCCEEEEEEcCh
Confidence 36777763 4 65554 67899999999999998754
No 281
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=33.04 E-value=2.1e+02 Score=25.87 Aligned_cols=120 Identities=13% Similarity=0.093 Sum_probs=63.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhc--cccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA--HEATGC 355 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~--~~~~~~ 355 (464)
.+.+|.+|.++ ..++.++.+. +..++.++..+.. ..+.+.++ . ++ .-+-...+++. .+|+
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~~--~~~~~a~~--~--g~--~~~~~~~~~l~~~~~D~-- 68 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADPFIE--GAQRLAEA--N--GA--EAVASPDEVFARDDIDG-- 68 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSSHH--HHHHHHHT--T--TC--EEESSHHHHTTCSCCCE--
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECCCHH--HHHHHHHH--c--CC--ceeCCHHHHhcCCCCCE--
Confidence 36777777765 2355566655 4565555543211 11122221 1 12 23445678888 5565
Q ss_pred eeccCC----hhHHHHHHHhCCcEec-cCCccc--h-hhHHHHHHhHhcceeecc---CcCHHHHHHHHHHHhc
Q 012412 356 FVTHCG----WNSTMEALSLGVPMVA-MPQWSD--Q-STNAKYILDVWKTGLKFP---IVKRDAIADCISEILE 418 (464)
Q Consensus 356 vI~HgG----~~s~~eal~~GvP~v~-~P~~~D--Q-~~na~rl~~~~G~g~~l~---~~~~~~l~~~i~~ll~ 418 (464)
||---- ...+.+|+.+|+++++ -|+..+ + ..-.+..++. |+-+.+. .+++ ..+.+++++.
T Consensus 69 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~-g~~~~v~~~~r~~p--~~~~~k~~i~ 139 (344)
T 3euw_A 69 IVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDG-ASKVMLGFNRRFDP--SFAAINARVA 139 (344)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGG-GGGEEECCGGGGCH--HHHHHHHHHH
T ss_pred EEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhc-CCeEEecchhhcCH--HHHHHHHHHh
Confidence 764433 3457889999999988 676653 2 2234445555 6655554 3333 3344445543
No 282
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=32.96 E-value=40 Score=29.40 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=24.8
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++. |-+- .++|+.|+++|++|.++...
T Consensus 21 k~vlITGas~~~giG--~~~a~~l~~~G~~v~~~~~~ 55 (267)
T 3gdg_A 21 KVVVVTGASGPKGMG--IEAARGCAEMGAAVAITYAS 55 (267)
T ss_dssp CEEEETTCCSSSSHH--HHHHHHHHHTSCEEEECBSS
T ss_pred CEEEEECCCCCCChH--HHHHHHHHHCCCeEEEEeCC
Confidence 5667776652 3343 57899999999999988654
No 283
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=32.96 E-value=59 Score=26.65 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
++|++. |+.|.+- ..++++|.++||+|+.++...
T Consensus 4 ~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeCh
Confidence 577765 3334433 567899999999999988643
No 284
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=32.81 E-value=33 Score=30.20 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=27.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+|++++.++.- --=-+.+|+.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNN-GGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVK-GAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHH-HHHHHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCC-HHHHHHHHHHHHHCCCeEEEEEec
Confidence 489998887651 112378999999999999998653
No 285
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=32.78 E-value=47 Score=28.25 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=29.7
Q ss_pred cEEE-EEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCL-VLT-YPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il-~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+|++ |.+ -++-|-..-...||..|+++|++|.++-...
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 3555 433 4466999999999999999999999987644
No 286
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=32.77 E-value=52 Score=28.71 Aligned_cols=34 Identities=9% Similarity=0.187 Sum_probs=24.0
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|.++++.++. |-+- .++|+.|+++|++|.++...
T Consensus 10 k~vlVTGas~~~gIG--~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 10 KRILVTGVASKLSIA--YGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp CEEEECCCCSTTSHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCCHH--HHHHHHHHHCCCEEEEEcCc
Confidence 4555665542 4444 47899999999999988754
No 287
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=32.74 E-value=97 Score=25.29 Aligned_cols=40 Identities=13% Similarity=0.021 Sum_probs=30.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
++++||+|+.+.+.. ..-+....+.|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 345789988776654 4455666788888999999999754
No 288
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=32.68 E-value=46 Score=29.55 Aligned_cols=40 Identities=10% Similarity=-0.010 Sum_probs=25.7
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
....++||++...--=-..-+-.+...++++|++|++++-
T Consensus 4 ~~~~~rvLvv~aHPDDe~lg~GGtia~~~~~G~~V~vv~~ 43 (273)
T 3dff_A 4 DPGATRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYTV 43 (273)
T ss_dssp ----CEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCCCCCEEEEEeCCChHHHhHHHHHHHHHHCCCcEEEEEE
Confidence 3346789876655544455566666677789999998873
No 289
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=32.51 E-value=57 Score=27.82 Aligned_cols=36 Identities=28% Similarity=0.194 Sum_probs=23.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+.++||+ +.+ .|.+- .++++.|+++|++|.++...
T Consensus 5 ~~~~~vlV-TGa-sggiG--~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 5 FSGLRALV-TGA-GKGIG--RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CTTCEEEE-EST-TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEE-eCC-CchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 33445544 433 34343 46899999999999988754
No 290
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=32.38 E-value=44 Score=28.06 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=23.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHH-hCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQ-HKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~-~rGh~V~~~~~~ 50 (464)
|||.++++.++ |.+- .++++.|. ++||+|+.+...
T Consensus 4 mmk~vlVtGas-g~iG--~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITILGAA-GQIA--QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SCSEEEEESTT-SHHH--HHHHHHHHHHCCCEEEEEESS
T ss_pred eEEEEEEEeCC-cHHH--HHHHHHHHhcCCceEEEEecC
Confidence 45644444332 3332 57889999 899999998864
No 291
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=32.36 E-value=26 Score=26.97 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+.+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 6 ~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 446887754 4333 45789999999999988764
No 292
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=32.32 E-value=2e+02 Score=23.13 Aligned_cols=38 Identities=5% Similarity=0.035 Sum_probs=23.1
Q ss_pred CcEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+||-+ -|............++++|.++.+.+.++.|-
T Consensus 4 M~kIYLAGP~Fs~~q~~~~~~l~~~L~~~~~g~~v~~P~ 42 (162)
T 3ehd_A 4 MTKIYFAGPLFSQADLRYNAYLVEQIRQLDKTIDLYLPQ 42 (162)
T ss_dssp CEEEEEESCCSSHHHHHHHHHHHHHHHTTCTTEEEECGG
T ss_pred ccEEEEECCCCCHHHHHHHHHHHHHHHhcCCCCEEECCC
Confidence 556655 33333356667777899998774445555553
No 293
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=32.29 E-value=46 Score=29.51 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=29.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.|.|..-||-|-..-...||..|+++|++|.++=..
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 344666777799999999999999999999887554
No 294
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=32.08 E-value=26 Score=31.88 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=32.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEE
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEA 69 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (464)
|||+|+-.|..|- .+|..|.+.||+|+++..... +.+. ..|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~~-~~i~----~~Gl~~~~ 48 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSDY-ETVK----AKGIRIRS 48 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTTH-HHHH----HHCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCChH-HHHH----hCCcEEee
Confidence 6899997666663 567889999999999998653 4444 34555444
No 295
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=31.94 E-value=65 Score=31.87 Aligned_cols=28 Identities=21% Similarity=0.341 Sum_probs=22.8
Q ss_pred cccccceeccCChh------HHHHHHHhCCcEeccC
Q 012412 350 HEATGCFVTHCGWN------STMEALSLGVPMVAMP 379 (464)
Q Consensus 350 ~~~~~~vI~HgG~~------s~~eal~~GvP~v~~P 379 (464)
+..+ +++|.|-| .+.||-+.++|+|++.
T Consensus 66 ~~~v--~~~TsGpG~~N~~~gi~~A~~~~vPvl~it 99 (549)
T 3eya_A 66 ELAV--CAGSCGPGNLHLINGLFDCHRNHVPVLAIA 99 (549)
T ss_dssp SCEE--EEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCEE--EEeCCCCcHhhhHHHHHHHHhhCCCEEEEe
Confidence 4455 88898865 7899999999999964
No 296
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=31.89 E-value=39 Score=24.76 Aligned_cols=33 Identities=18% Similarity=0.157 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKG-IKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rG-h~V~~~~~~ 50 (464)
+++|+++-. |.+- ..+++.|.++| ++|+.+...
T Consensus 5 ~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCC
Confidence 467887743 4333 46788999999 999888764
No 297
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=31.81 E-value=54 Score=26.97 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccChHHHHH-HHHHHHh-CCCeEEEEeC
Q 012412 13 LAHCLVLTYPGQGHINPLLQ-FSRRLQH-KGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~-la~~L~~-rGh~V~~~~~ 49 (464)
||||+++..+.+|+..-+.. +++.|.+ .|++|.++--
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l 39 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRV 39 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEEC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEc
Confidence 36898777777788765544 5666766 7998887754
No 298
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=31.69 E-value=1.4e+02 Score=21.12 Aligned_cols=44 Identities=7% Similarity=0.049 Sum_probs=30.5
Q ss_pred hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 371 ~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
..+|++++--..+.. ...+. |+--.+. .++.++|..++++++..
T Consensus 74 ~~~~ii~~~~~~~~~----~~~~~-g~~~~l~kp~~~~~l~~~l~~~~~~ 118 (119)
T 2j48_A 74 PHPPLVLFLGEPPVD----PLLTA-QASAILSKPLDPQLLLTTLQGLCPP 118 (119)
T ss_dssp SSCCCEEEESSCCSS----HHHHH-HCSEECSSCSTTHHHHHHHHTTCCC
T ss_pred CCCCEEEEeCCCCch----hhhhc-CHHHhccCCCCHHHHHHHHHHHhcC
Confidence 467887765444433 45566 7766666 88999999999887653
No 299
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=31.65 E-value=2.1e+02 Score=25.83 Aligned_cols=123 Identities=14% Similarity=0.043 Sum_probs=62.8
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhc--cccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA--HEATGC 355 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~--~~~~~~ 355 (464)
.+.+|.+|.++ ..++.++.+. +..++.++..+. + ..+.+.++...+ .-+-...+++. .+|+
T Consensus 7 ~igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~-~-~~~~~~~~~~~~-----~~~~~~~~ll~~~~~D~-- 70 (330)
T 3e9m_A 7 RYGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRRL-E-NAQKMAKELAIP-----VAYGSYEELCKDETIDI-- 70 (330)
T ss_dssp EEEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSSS-H-HHHHHHHHTTCC-----CCBSSHHHHHHCTTCSE--
T ss_pred EEEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCCH-H-HHHHHHHHcCCC-----ceeCCHHHHhcCCCCCE--
Confidence 36677777765 2355666664 445554443321 1 112222221111 12445678887 4565
Q ss_pred eeccCCh----hHHHHHHHhCCcEec-cCCccc--h-hhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhc
Q 012412 356 FVTHCGW----NSTMEALSLGVPMVA-MPQWSD--Q-STNAKYILDVWKTGLKFP-IVKRDAIADCISEILE 418 (464)
Q Consensus 356 vI~HgG~----~s~~eal~~GvP~v~-~P~~~D--Q-~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~ 418 (464)
|+-..-. ..+.+|+.+|+++++ -|+..+ + ..-.+..++. |+-+.+. ...-.-..+.+++++.
T Consensus 71 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~-g~~~~v~~~~r~~p~~~~~k~~i~ 141 (330)
T 3e9m_A 71 IYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQ-GVFLMEAQKSVFLPITQKVKATIQ 141 (330)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHT-TCCEEECCSGGGCHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCeEEEEEhhhhCHHHHHHHHHHh
Confidence 6644333 447889999999988 676543 2 2233444555 6655554 2222223344445544
No 300
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=31.61 E-value=99 Score=23.19 Aligned_cols=48 Identities=6% Similarity=-0.006 Sum_probs=30.6
Q ss_pred hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 371 ~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
..+|++++--..|.......+... |+--.+. .++.+.|..++++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLTKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhccCCCCHHHHHHHHHHHHHH
Confidence 457777765444443333334444 4533444 88999999999999854
No 301
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=31.42 E-value=54 Score=32.83 Aligned_cols=79 Identities=14% Similarity=0.105 Sum_probs=43.7
Q ss_pred HHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCC-CcEEEEec--------cChHHhhccccccceeccCC------
Q 012412 297 EELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTS-HKSLVVSW--------CPQLEVLAHEATGCFVTHCG------ 361 (464)
Q Consensus 297 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~nv~~~~~--------~p~~~ll~~~~~~~vI~HgG------ 361 (464)
+.+++.|++.|.+.++.++++....+-+.+. .. +.++.+.- +-.-.-...-..+++++|.|
T Consensus 8 ~~lv~~L~~~GV~~vfg~PG~~~~~l~~al~----~~~~~i~~i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~ 83 (590)
T 1v5e_A 8 LAVMKILESWGADTIYGIPSGTLSSLMDAMG----EEENNVKFLQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHL 83 (590)
T ss_dssp HHHHHHHHHTTCCEEEECCCTTTHHHHTTSS----STTCCCEEEECSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEecCCchHHHHHHHH----hcCCCCeEEeeCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHH
Confidence 4566677777777777766654333322221 11 12333322 11111112222334899988
Q ss_pred hhHHHHHHHhCCcEeccC
Q 012412 362 WNSTMEALSLGVPMVAMP 379 (464)
Q Consensus 362 ~~s~~eal~~GvP~v~~P 379 (464)
.+.+.||-+.++|+|++-
T Consensus 84 ~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 84 INGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 567899999999999963
No 302
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=31.33 E-value=77 Score=30.40 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=33.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCccccc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTRFFYK 54 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~~~~~ 54 (464)
-+++...++.|-..-++.++..++. .|..|.|++.+...+
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~ 245 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQ 245 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHH
Confidence 3567888899999999999999886 699999999876543
No 303
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=31.17 E-value=91 Score=26.46 Aligned_cols=118 Identities=11% Similarity=0.071 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHH
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYL 89 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 89 (464)
+.+++||.++.++..+.+..++.-.+.= .+++|..+.+........+-....|+.+..++..--.
T Consensus 2 ~~~~~riavl~SG~Gsnl~all~~~~~~--~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~------------- 66 (215)
T 3tqr_A 2 NREPLPIVVLISGNGTNLQAIIGAIQKG--LAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFP------------- 66 (215)
T ss_dssp --CCEEEEEEESSCCHHHHHHHHHHHTT--CSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSS-------------
T ss_pred CCCCcEEEEEEeCCcHHHHHHHHHHHcC--CCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccC-------------
Q ss_pred HHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch-hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCCCCCce
Q 012412 90 ERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPLTGNEI 168 (464)
Q Consensus 90 ~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 168 (464)
......+.+.+..++..+ |+||+-.+. .....+-......++-+.++.
T Consensus 67 ------~r~~~d~~~~~~l~~~~~-Dliv~agy~~il~~~~l~~~~~~~iNiHpSL------------------------ 115 (215)
T 3tqr_A 67 ------SRTDFESTLQKTIDHYDP-KLIVLAGFMRKLGKAFVSHYSGRMINIHPSL------------------------ 115 (215)
T ss_dssp ------SHHHHHHHHHHHHHTTCC-SEEEESSCCSCCCHHHHHHTTTSEEEEESSS------------------------
T ss_pred ------chhHhHHHHHHHHHhcCC-CEEEEccchhhCCHHHHhhccCCeEEeCccc------------------------
Q ss_pred eCCCCC
Q 012412 169 LLPGMP 174 (464)
Q Consensus 169 ~~p~~p 174 (464)
+|.++
T Consensus 116 -LP~yr 120 (215)
T 3tqr_A 116 -LPKYT 120 (215)
T ss_dssp -TTTTC
T ss_pred -CCCCC
No 304
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=31.15 E-value=50 Score=29.58 Aligned_cols=38 Identities=18% Similarity=0.144 Sum_probs=31.2
Q ss_pred CcEEE-EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+++++ |..-||-|=..-...||..|+++|++|.++=..
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45554 666667799999999999999999999998654
No 305
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=30.78 E-value=51 Score=24.89 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=29.1
Q ss_pred cEEEEEcCCCc-cCh-HHHHHHHHHHHhCC--CeEEEEeCccccc
Q 012412 14 AHCLVLTYPGQ-GHI-NPLLQFSRRLQHKG--IKVTLVTTRFFYK 54 (464)
Q Consensus 14 ~~il~~~~~~~-GH~-~p~l~la~~L~~rG--h~V~~~~~~~~~~ 54 (464)
+|++|+-..+. -.. +..+..|....++| |+|.++......+
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 68876444432 222 44778899999999 8999999876655
No 306
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=30.71 E-value=39 Score=28.49 Aligned_cols=37 Identities=14% Similarity=0.171 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCccC---hHHHH-HHHHHHHhC--CCeEEEEeC
Q 012412 13 LAHCLVLTYPGQGH---INPLL-QFSRRLQHK--GIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH---~~p~l-~la~~L~~r--Gh~V~~~~~ 49 (464)
|||||++..+.+++ ...+. .+++.|.++ ||+|.++--
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 46899877776654 22222 345556555 899887654
No 307
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=30.62 E-value=45 Score=29.45 Aligned_cols=34 Identities=29% Similarity=0.416 Sum_probs=27.3
Q ss_pred cEEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQ--GHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+|++++.++. |+ -+.+|+.|.++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 48999888775 33 378999999999999998653
No 308
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=30.48 E-value=59 Score=27.81 Aligned_cols=33 Identities=3% Similarity=-0.059 Sum_probs=23.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|.++++.++. .+ =.++++.|+++|++|.++...
T Consensus 8 k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 8 RRVLVYGGRG-AL--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCc-HH--HHHHHHHHHhCCCEEEEEeCC
Confidence 4555665543 23 257899999999999988653
No 309
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=30.35 E-value=38 Score=26.23 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+.||+++-.|..| ..+|+.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4578888655444 478999999999999998754
No 310
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=30.23 E-value=47 Score=30.08 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=23.9
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
...++++||+.- +.|-+- ..|++.|.++||+|+.+...
T Consensus 17 ~~~~~~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 17 RGSHMKKVFITG--ICGQIG--SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp ----CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred ecCCCCEEEEeC--CccHHH--HHHHHHHHHCCCEEEEEECC
Confidence 334567776653 333333 46789999999999998764
No 311
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=30.23 E-value=2e+02 Score=26.26 Aligned_cols=121 Identities=11% Similarity=0.071 Sum_probs=65.1
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhh--ccccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVL--AHEATGC 355 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll--~~~~~~~ 355 (464)
.+.+|.+|.++ ..++.++.+. +..++.++..+.. ..+.+.++. ++ ..+-...+++ +.+|+
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~~--~~~~~~~~~----g~--~~~~~~~~~l~~~~~D~-- 69 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTED--KREKFGKRY----NC--AGDATMEALLAREDVEM-- 69 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSHH--HHHHHHHHH----TC--CCCSSHHHHHHCSSCCE--
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCHH--HHHHHHHHc----CC--CCcCCHHHHhcCCCCCE--
Confidence 46777777654 3456677766 5566555543211 111222221 11 1245667888 44666
Q ss_pred eeccCC----hhHHHHHHHhCCcEec-cCCcc--ch-hhHHHHHHhHhcceeecc---CcCHHHHHHHHHHHhcC
Q 012412 356 FVTHCG----WNSTMEALSLGVPMVA-MPQWS--DQ-STNAKYILDVWKTGLKFP---IVKRDAIADCISEILEG 419 (464)
Q Consensus 356 vI~HgG----~~s~~eal~~GvP~v~-~P~~~--DQ-~~na~rl~~~~G~g~~l~---~~~~~~l~~~i~~ll~~ 419 (464)
|+---- ...+.+|+.+|+++++ -|+.. ++ ..-.+..++. |+-+.+. .+++ ..+.+++++.+
T Consensus 70 V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~-~~~~~v~~~~R~~p--~~~~~k~~i~~ 141 (354)
T 3db2_A 70 VIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKET-GVKFLCGHSSRRLG--ALRKMKEMIDT 141 (354)
T ss_dssp EEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH-CCCEEEECGGGGSH--HHHHHHHHHHT
T ss_pred EEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHc-CCeEEEeechhcCH--HHHHHHHHHhc
Confidence 653222 4567889999999988 67654 22 2234445566 6655554 3443 33445555543
No 312
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=30.21 E-value=98 Score=27.08 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=23.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| +- .++|+.|+++|++|.++..
T Consensus 27 k~~lVTGas~g-IG--~aia~~la~~G~~V~~~~r 58 (271)
T 4ibo_A 27 RTALVTGSSRG-LG--RAMAEGLAVAGARILINGT 58 (271)
T ss_dssp CEEEETTCSSH-HH--HHHHHHHHHTTCEEEECCS
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCEEEEEeC
Confidence 56677766543 22 4789999999999988764
No 313
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=30.06 E-value=1.7e+02 Score=21.76 Aligned_cols=108 Identities=10% Similarity=0.129 Sum_probs=59.9
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
...+.....+...++..++.+.....+. +.+ +.+.+ ....+.+.++ +|.. .|. .+.+.
T Consensus 11 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~al-~~~~~---~~~dlvl~D~~lp~~--------------~g~-~~~~~ 69 (136)
T 3t6k_A 11 DDDDTVAEMLELVLRGAGYEVRRAASGE--EAL-QQIYK---NLPDALICDVLLPGI--------------DGY-TLCKR 69 (136)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEESSHH--HHH-HHHHH---SCCSEEEEESCCSSS--------------CHH-HHHHH
T ss_pred eCCHHHHHHHHHHHHHCCCEEEEeCCHH--HHH-HHHHh---CCCCEEEEeCCCCCC--------------CHH-HHHHH
Confidence 4456677777778888888765332211 111 11111 2334444443 1111 122 22333
Q ss_pred HH-----hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcCC
Q 012412 369 LS-----LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 420 (464)
Q Consensus 369 l~-----~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~~ 420 (464)
+. ..+|++++--..+ .....+..+. |+--.+. .++.++|..+|++++...
T Consensus 70 lr~~~~~~~~pii~~t~~~~-~~~~~~~~~~-ga~~~l~KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 70 VRQHPLTKTLPILMLTAQGD-ISAKIAGFEA-GANDYLAKPFEPQELVYRVKNILART 125 (136)
T ss_dssp HHHSGGGTTCCEEEEECTTC-HHHHHHHHHH-TCSEEEETTCCHHHHHHHHHHHHHC-
T ss_pred HHcCCCcCCccEEEEecCCC-HHHHHHHHhc-CcceEEeCCCCHHHHHHHHHHHHhcc
Confidence 32 3678887764433 3344555667 7766666 899999999999999764
No 314
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=30.06 E-value=49 Score=28.25 Aligned_cols=40 Identities=18% Similarity=0.184 Sum_probs=31.8
Q ss_pred CcEEE-EE-cCCCccChHHHHHHHHHHHhC-CCeEEEEeCccc
Q 012412 13 LAHCL-VL-TYPGQGHINPLLQFSRRLQHK-GIKVTLVTTRFF 52 (464)
Q Consensus 13 ~~~il-~~-~~~~~GH~~p~l~la~~L~~r-Gh~V~~~~~~~~ 52 (464)
++|++ |. +-||-|-..-...||..|+++ |++|.++-....
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 45665 44 456779999999999999998 999999977544
No 315
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=29.98 E-value=38 Score=29.60 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=24.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+++++.++.| +- .++|+.|+++|++|.++....
T Consensus 28 k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 28 APILITGASQR-VG--LHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCEEESSTTSH-HH--HHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCCCH-HH--HHHHHHHHHCCCEEEEEeCCh
Confidence 45666666543 32 578999999999999987643
No 316
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=29.93 E-value=1.5e+02 Score=25.33 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=22.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|.++++.++ |-+- .++++.|+++|++|.++...
T Consensus 8 k~vlVTGas-~giG--~~ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 8 KNVWVTGAG-KGIG--YATALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp CEEEEESTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEeCc
Confidence 345555544 3333 46899999999999988653
No 317
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=29.86 E-value=79 Score=24.77 Aligned_cols=96 Identities=14% Similarity=0.177 Sum_probs=55.7
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHHHHHhC
Q 012412 17 LVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLERFWQIG 96 (464)
Q Consensus 17 l~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (464)
+|++... .+=.-++.+|+.|.+.|+++. +|. .-.+.+. ..|+.+..+...-.. +... .
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i~-AT~-GTa~~L~----~~Gi~v~~v~k~~eg-g~~~--------------~ 84 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF-ATE-ATSDWLN----ANNVPATPVAWPSQE-GQNP--------------S 84 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEEE-EEH-HHHHHHH----HTTCCCEEECCGGGC--------------------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEEE-ECc-hHHHHHH----HcCCeEEEEEeccCC-Cccc--------------c
Confidence 4555543 456778999999999999843 444 3445666 567777766521110 0000 0
Q ss_pred cHHHHHHHHHhcCCCCCccEEEeCCch--------hhHHHHHHHcCCccEE
Q 012412 97 PQTLTELVEKMNGSDSPVDCIVYDSIL--------LWALDVAKKFGLLGAP 139 (464)
Q Consensus 97 ~~~l~~~~~~l~~~~~p~DlVI~D~~~--------~~~~~~A~~~giP~v~ 139 (464)
...+.+++++ ..+|+||..+-- ..-...|-.++||++.
T Consensus 85 ~~~i~d~i~~-----g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 85 LSSIRKLIRD-----GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp CBCHHHHHHT-----TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred cccHHHHHHC-----CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0123344433 458999986532 1234558889999764
No 318
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=29.83 E-value=2.3e+02 Score=25.82 Aligned_cols=111 Identities=12% Similarity=-0.044 Sum_probs=54.8
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhccccccce
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCF 356 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~v 356 (464)
+..+++|+.|++. ....+..+.|++-+..+-++- -....+++.+. ..+.+.......+
T Consensus 216 g~dv~iia~Gs~~----~~a~~Aa~~L~~~Gi~v~vv~-~~~l~P~d~~~-----------------i~~~~~~~~~vv~ 273 (341)
T 2ozl_B 216 GTHITVVSHSRPV----GHCLEAAAVLSKEGVECEVIN-MRTIRPMDMET-----------------IEASVMKTNHLVT 273 (341)
T ss_dssp CSSEEEEECSTHH----HHHHHHHHHHHTTTCCEEEEE-CCEEETCCHHH-----------------HHHHHHHHSCEEE
T ss_pred CCCEEEEEeCHHH----HHHHHHHHHHHhcCCCeEEEe-eeeecCCCHHH-----------------HHHHHhcCCeEEE
Confidence 3558999999886 344445555665554432221 11123344331 1122222221112
Q ss_pred e----ccCChhH-HHHHHHh-------CCcE--eccCCccchhhHHHHHHhHhcceeeccCcCHHHHHHHHHHHhc
Q 012412 357 V----THCGWNS-TMEALSL-------GVPM--VAMPQWSDQSTNAKYILDVWKTGLKFPIVKRDAIADCISEILE 418 (464)
Q Consensus 357 I----~HgG~~s-~~eal~~-------GvP~--v~~P~~~DQ~~na~rl~~~~G~g~~l~~~~~~~l~~~i~~ll~ 418 (464)
| ..||+|+ +.+.+.- .+|+ +.+|...=.... ...++. | ++++.|.++++++|.
T Consensus 274 vEe~~~~Gg~g~~v~~~l~~~~~~~~l~~~v~~ig~~d~~~~~g~-~l~~~~-g-------~~~~~I~~~i~~~l~ 340 (341)
T 2ozl_B 274 VEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAK-ILEDNS-I-------PQVKDIIFAIKKTLN 340 (341)
T ss_dssp ECSSCSTTCHHHHHHHHHHHSTTGGGCSSCCEEECCCSSCCCSSH-HHHHTT-S-------CCHHHHHHHHHHHHT
T ss_pred EecCcccCcHHHHHHHHHHhhhcccccCCCEEEEecCCcCCCCcH-HHHHHh-C-------cCHHHHHHHHHHHhc
Confidence 2 2588876 4445543 3566 445432222222 222223 3 789999999988773
No 319
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=29.71 E-value=67 Score=26.95 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS 71 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~ 71 (464)
.+||.|+-.|..| ..+|+.|.++||+|+++..... .+. ...+.+..+|
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~~~--~~~----~aD~vi~av~ 66 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSKDQ--ATT----LGEIVIMAVP 66 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTTCC--CSS----CCSEEEECSC
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCCHH--Hhc----cCCEEEEcCC
Confidence 5688888654444 5678899999999998865322 222 3445555555
No 320
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=29.69 E-value=1.7e+02 Score=23.54 Aligned_cols=32 Identities=13% Similarity=0.168 Sum_probs=25.6
Q ss_pred Hhhccccccceec-----cCChhHHHH---HHHhCCcEeccC
Q 012412 346 EVLAHEATGCFVT-----HCGWNSTME---ALSLGVPMVAMP 379 (464)
Q Consensus 346 ~ll~~~~~~~vI~-----HgG~~s~~e---al~~GvP~v~~P 379 (464)
..+..||+ +|- .-..||..| |.+.|+|++++.
T Consensus 77 ~~i~~aD~--vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 77 TGISNATC--GVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHHHHCSE--EEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhCCE--EEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 66788998 665 456799988 488999999985
No 321
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=29.65 E-value=55 Score=29.57 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+.|+||+. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 18 ~~~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 18 GSHMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp TTCCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEECC
T ss_pred CCCCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 445677665 3334443 46789999999999998763
No 322
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=29.65 E-value=21 Score=32.50 Aligned_cols=41 Identities=12% Similarity=0.189 Sum_probs=28.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
.++||.|+-.|..| ..+|..|++.||+|+++..+...+.+.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~ 58 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIE 58 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHH
Confidence 35799999777666 457888999999999994443444444
No 323
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=29.56 E-value=96 Score=26.44 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++. -+- .++|+.|+++|++|.++...
T Consensus 6 k~vlITGas~-gIG--~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 6 KVALVTGASR-GIG--FEVAHALASKGATVVGTATS 38 (247)
T ss_dssp CEEEESSCSS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4566666553 232 57899999999999888764
No 324
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=29.52 E-value=96 Score=30.86 Aligned_cols=78 Identities=9% Similarity=0.056 Sum_probs=42.8
Q ss_pred HHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc--------C--hHHhhccccccceeccCChh--
Q 012412 296 MEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC--------P--QLEVLAHEATGCFVTHCGWN-- 363 (464)
Q Consensus 296 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~--------p--~~~ll~~~~~~~vI~HgG~~-- 363 (464)
.+.+++.|++.|.+.++-++++....+-+.+.+ .+.++.+.-. - +..+-.+..+ ++++.|-|
T Consensus 14 a~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~----~~~i~~i~~~hE~~Aa~aAdGyAr~tG~pgv--~~~TsGpG~~ 87 (578)
T 3lq1_A 14 LAAFIEELVQAGVKEAIISPGSRSTPLALMMAE----HPILKIYVDVDERSAGFFALGLAKASKRPVV--LLCTSGTAAA 87 (578)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHHHHHHHHH----CSSCEEEECSSHHHHHHHHHHHHHHHCCCEE--EEECSSHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCccHHHHHHHHh----CCCceEEEecCcHHHHHHHHHHHHhhCCCEE--EEECCchhhh
Confidence 344555566666666666555433333333221 1223332211 1 1122234455 88999966
Q ss_pred ----HHHHHHHhCCcEeccC
Q 012412 364 ----STMEALSLGVPMVAMP 379 (464)
Q Consensus 364 ----s~~eal~~GvP~v~~P 379 (464)
.+.||-+-++|+|++-
T Consensus 88 N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 88 NYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp TTHHHHHHHHHTTCCEEEEE
T ss_pred hhhHHHHHHHhcCCCeEEEe
Confidence 6789999999999964
No 325
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.34 E-value=88 Score=28.17 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=24.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| +- .++|+.|+++|++|.++..
T Consensus 47 k~~lVTGas~G-IG--~aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 47 KVAFITGAARG-QG--RTHAVRLAQDGADIVAIDL 78 (317)
T ss_dssp CEEEESSCSSH-HH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcH-HH--HHHHHHHHHCCCeEEEEec
Confidence 56777776643 32 5789999999999998854
No 326
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=29.24 E-value=42 Score=29.17 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=29.8
Q ss_pred cEEE-EE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCL-VL-TYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il-~~-~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
++++ |. .-||-|-..-...||..|+++|++|.++=...
T Consensus 6 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 6 VRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4555 54 34566899999999999999999999986554
No 327
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=29.21 E-value=39 Score=32.85 Aligned_cols=49 Identities=18% Similarity=0.333 Sum_probs=34.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAIS 71 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~ 71 (464)
-+++|+.- .+=.-++.+|+.|.+.|.+|. ++..-.+.++ ..|+.+..+.
T Consensus 24 i~raLISV----~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~----e~GI~v~~V~ 72 (534)
T 4ehi_A 24 AMRALLSV----SDKEGIVEFGKELENLGFEIL--STGGTFKLLK----ENGIKVIEVS 72 (534)
T ss_dssp CCEEEEEE----SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHH----HTTCCCEECB
T ss_pred CcEEEEEE----cccccHHHHHHHHHHCCCEEE--EccHHHHHHH----HCCCceeehh
Confidence 34565533 234558899999999999875 5555666777 6788887775
No 328
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=29.15 E-value=1.7e+02 Score=21.38 Aligned_cols=109 Identities=8% Similarity=0.000 Sum_probs=57.0
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEecc-ChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWC-PQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~-p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
...+.....+...++..++.+++...+. + .-+.+.+ .+..+.+.++- |.. .|...+.+.
T Consensus 14 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~-a~~~l~~---~~~dlvi~d~~l~~~--------------~g~~~~~~l 73 (130)
T 3eod_A 14 EDEQVFRSLLDSWFSSLGATTVLAADGV--D-ALELLGG---FTPDLMICDIAMPRM--------------NGLKLLEHI 73 (130)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEESCHH--H-HHHHHTT---CCCSEEEECCC-------------------CHHHHHHH
T ss_pred eCCHHHHHHHHHHHHhCCceEEEeCCHH--H-HHHHHhc---CCCCEEEEecCCCCC--------------CHHHHHHHH
Confidence 4566777778888888888766532211 1 1111111 22344555431 211 133222222
Q ss_pred H--HhCCcEeccCCccchhhHHHHHHhHhcceeecc-Cc-CHHHHHHHHHHHhcCC
Q 012412 369 L--SLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IV-KRDAIADCISEILEGE 420 (464)
Q Consensus 369 l--~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~-~~~~l~~~i~~ll~~~ 420 (464)
- ...+|++++--.. +........+. |+--.+. .+ +.+.|.+++++++...
T Consensus 74 ~~~~~~~~ii~~t~~~-~~~~~~~~~~~-g~~~~l~KP~~~~~~l~~~i~~~l~~~ 127 (130)
T 3eod_A 74 RNRGDQTPVLVISATE-NMADIAKALRL-GVEDVLLKPVKDLNRLREMVFACLYPS 127 (130)
T ss_dssp HHTTCCCCEEEEECCC-CHHHHHHHHHH-CCSEEEESCC---CHHHHHHHHHHC--
T ss_pred HhcCCCCCEEEEEcCC-CHHHHHHHHHc-CCCEEEeCCCCcHHHHHHHHHHHhchh
Confidence 2 2357887765443 33444555667 7766666 66 8999999999999764
No 329
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=28.98 E-value=1.5e+02 Score=25.20 Aligned_cols=46 Identities=15% Similarity=0.115 Sum_probs=33.4
Q ss_pred hhHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEE
Q 012412 265 TEACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLW 312 (464)
Q Consensus 265 ~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 312 (464)
.+.+.+|+.. ...+++|..|+...........+.+++++++..++.
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 4557777763 456899988875444567788899999999876543
No 330
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=28.98 E-value=54 Score=32.68 Aligned_cols=46 Identities=11% Similarity=-0.035 Sum_probs=39.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccccc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKSLH 57 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~~~ 57 (464)
+..+||+.+.++-.|-....-++..|.++|++|.+++.....+.+.
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv 142 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKIL 142 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 4568999999999999999999999999999999998765555443
No 331
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=28.97 E-value=50 Score=28.53 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=29.9
Q ss_pred cEEE-EE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCL-VL-TYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il-~~-~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+|++ |. +-||-|-..-...||..|+++|++|.++=...
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4565 43 34466899999999999999999999987654
No 332
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=28.94 E-value=1.8e+02 Score=21.59 Aligned_cols=107 Identities=12% Similarity=0.153 Sum_probs=59.9
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cCh--HHhhccccccceeccCChhHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQ--LEVLAHEATGCFVTHCGWNSTM 366 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~--~~ll~~~~~~~vI~HgG~~s~~ 366 (464)
...+.....+...|+..++.+....... +.+ +.+.+ .+..+.+.++ +|. .. |.. +.
T Consensus 13 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~a~-~~l~~---~~~dlvi~D~~l~~~~~~--------------g~~-~~ 71 (136)
T 3kto_A 13 DHQKDARAALSKLLSPLDVTIQCFASAE--SFM-RQQIS---DDAIGMIIEAHLEDKKDS--------------GIE-LL 71 (136)
T ss_dssp CSCHHHHHHHHHHHTTSSSEEEEESSHH--HHT-TSCCC---TTEEEEEEETTGGGBTTH--------------HHH-HH
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEeCCHH--HHH-HHHhc---cCCCEEEEeCcCCCCCcc--------------HHH-HH
Confidence 4567777778888888888776433221 111 10100 1223444443 122 11 121 22
Q ss_pred HHHH---hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 367 EALS---LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 367 eal~---~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
+.+. ..+|++++--..+ .....+..+. |+--.+. .++.++|..+|++++..
T Consensus 72 ~~l~~~~~~~~ii~~s~~~~-~~~~~~~~~~-ga~~~l~KP~~~~~l~~~i~~~~~~ 126 (136)
T 3kto_A 72 ETLVKRGFHLPTIVMASSSD-IPTAVRAMRA-SAADFIEKPFIEHVLVHDVQQIING 126 (136)
T ss_dssp HHHHHTTCCCCEEEEESSCC-HHHHHHHHHT-TCSEEEESSBCHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEEEcCCC-HHHHHHHHHc-ChHHheeCCCCHHHHHHHHHHHHhc
Confidence 2222 4688887764443 3444555567 7766666 89999999999999865
No 333
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=28.94 E-value=1.2e+02 Score=27.24 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| + =.++|+.|+++|++|.++..
T Consensus 28 k~vlVTGas~G-I--G~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 28 RVVIVTGAGGG-I--GRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56777766642 3 25789999999999998864
No 334
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=28.89 E-value=39 Score=31.09 Aligned_cols=33 Identities=24% Similarity=0.175 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+|||.|+-.|..| ..+|..|.++||+|+++...
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 4799998665444 34688899999999988753
No 335
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=28.87 E-value=2.8e+02 Score=25.16 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=68.1
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhC--CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhc--cccc
Q 012412 278 ESVVYVSYGSFVELKAEEMEELAWGLKSS--DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA--HEAT 353 (464)
Q Consensus 278 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~--~~~~ 353 (464)
-.+.+|.+|.++. .++.++.+. +..++.++..+.. -.+.+.++. ++ .-+-...+++. .+|+
T Consensus 14 ~rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~~--~~~~~~~~~----~~--~~~~~~~~ll~~~~~D~ 78 (354)
T 3q2i_A 14 IRFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDPA--ALKAAVERT----GA--RGHASLTDMLAQTDADI 78 (354)
T ss_dssp EEEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSHH--HHHHHHHHH----CC--EEESCHHHHHHHCCCSE
T ss_pred ceEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCHH--HHHHHHHHc----CC--ceeCCHHHHhcCCCCCE
Confidence 3478888887762 345666655 4566655543211 112222221 12 33456678886 5565
Q ss_pred cceeccCC----hhHHHHHHHhCCcEec-cCCccc--h-hhHHHHHHhHhcceeecc---CcCHHHHHHHHHHHhcC
Q 012412 354 GCFVTHCG----WNSTMEALSLGVPMVA-MPQWSD--Q-STNAKYILDVWKTGLKFP---IVKRDAIADCISEILEG 419 (464)
Q Consensus 354 ~~vI~HgG----~~s~~eal~~GvP~v~-~P~~~D--Q-~~na~rl~~~~G~g~~l~---~~~~~~l~~~i~~ll~~ 419 (464)
|+--.- ...+.+|+.+|+++++ -|+..+ + ....+..++. |+-+.+. .+++ ..+.+++++.+
T Consensus 79 --V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~-g~~~~v~~~~r~~p--~~~~~k~~i~~ 150 (354)
T 3q2i_A 79 --VILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKA-KKHLFVVKQNRRNA--TLQLLKRAMQE 150 (354)
T ss_dssp --EEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TCCEEECCGGGGSH--HHHHHHHHHHT
T ss_pred --EEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHh-CCeEEEEEcccCCH--HHHHHHHHHhc
Confidence 663322 3456789999999998 686542 2 2344455666 7666554 4554 34555666654
No 336
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=28.77 E-value=56 Score=27.55 Aligned_cols=36 Identities=6% Similarity=0.063 Sum_probs=21.9
Q ss_pred CcEEEEEcCCCc-cChHHHHHH----HHHHHhC--CCeEEEEe
Q 012412 13 LAHCLVLTYPGQ-GHINPLLQF----SRRLQHK--GIKVTLVT 48 (464)
Q Consensus 13 ~~~il~~~~~~~-GH~~p~l~l----a~~L~~r--Gh~V~~~~ 48 (464)
|||||++..+.+ |.-.-...| ++.|.++ ||+|.++-
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~d 46 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELD 46 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 579998776665 343444444 4444444 88887654
No 337
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=28.56 E-value=1e+02 Score=26.22 Aligned_cols=116 Identities=14% Similarity=0.119 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc---ccccccCCCCCCceEEEccCCCCCCCCCCccC
Q 012412 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF---YKSLHRDSSSSSIPLEAISDGYDEGGYAQAES 84 (464)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 84 (464)
.....++||+|+.++..+.+..++.-.+. +.+++|..+.+... .+... ..|+.+..++..-..
T Consensus 7 ~~~~~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~Vis~~~a~~~~~A~----~~gIp~~~~~~~~~~-------- 72 (215)
T 3da8_A 7 VPPSAPARLVVLASGTGSLLRSLLDAAVG--DYPARVVAVGVDRECRAAEIAA----EASVPVFTVRLADHP-------- 72 (215)
T ss_dssp ECCCSSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEEEESSCCHHHHHHH----HTTCCEEECCGGGSS--------
T ss_pred CCCCCCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEEEeCCchHHHHHHH----HcCCCEEEeCccccc--------
Q ss_pred HHHHHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCch-hhHHHHHHHcCCccEEEecchHHHHHHHhhhhcCcccCCC
Q 012412 85 IEAYLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSIL-LWALDVAKKFGLLGAPFLTQSCAVDYIYYHVKKGSLELPL 163 (464)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~p~ 163 (464)
......+.+.+..++..+ |+||.-.+. .....+-..+...++-+.++.
T Consensus 73 -----------~r~~~d~~~~~~l~~~~~-Dlivlagy~~iL~~~~l~~~~~~~iNiHpSL------------------- 121 (215)
T 3da8_A 73 -----------SRDAWDVAITAATAAHEP-DLVVSAGFMRILGPQFLSRFYGRTLNTHPAL------------------- 121 (215)
T ss_dssp -----------SHHHHHHHHHHHHHTTCC-SEEEEEECCSCCCHHHHHHHTTTEEEEESSC-------------------
T ss_pred -----------chhhhhHHHHHHHHhhCC-CEEEEcCchhhCCHHHHhhccCCeEEeCccc-------------------
Q ss_pred CCCceeCCCCC
Q 012412 164 TGNEILLPGMP 174 (464)
Q Consensus 164 ~~~~~~~p~~p 174 (464)
+|.++
T Consensus 122 ------LP~yr 126 (215)
T 3da8_A 122 ------LPAFP 126 (215)
T ss_dssp ------TTSSC
T ss_pred ------ccCCC
No 338
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=28.51 E-value=1e+02 Score=24.71 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=25.2
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
.+|+++||....+.+.+...+.+|++.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCCC
Confidence 48999999988899999999999988643
No 339
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=28.48 E-value=66 Score=32.33 Aligned_cols=25 Identities=12% Similarity=0.235 Sum_probs=20.6
Q ss_pred ceeccCCh------hHHHHHHHhCCcEeccC
Q 012412 355 CFVTHCGW------NSTMEALSLGVPMVAMP 379 (464)
Q Consensus 355 ~vI~HgG~------~s~~eal~~GvP~v~~P 379 (464)
++++|.|- +.+.||-+.++|+|++-
T Consensus 94 v~~~TsGpG~~N~~~~l~~A~~~~vPlvvIt 124 (616)
T 2pan_A 94 VCLGTSGPAGTDMITALYSASADSIPILCIT 124 (616)
T ss_dssp EEEECSTHHHHTSHHHHHHHHHTTCCEEEEE
T ss_pred EEEeCCCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 37788885 57899999999999964
No 340
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=28.34 E-value=84 Score=26.13 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=28.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
..++++..+..|+-.-...+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 456666666778888899999999999999877765
No 341
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=28.27 E-value=57 Score=29.43 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=52.3
Q ss_pred cEEEEEcCCCcc--C--hHHHHHHHHHHHhCCCeEEEE-eCcccccccccC-CCCCCceEEEccCCCCCCCCCCccCHHH
Q 012412 14 AHCLVLTYPGQG--H--INPLLQFSRRLQHKGIKVTLV-TTRFFYKSLHRD-SSSSSIPLEAISDGYDEGGYAQAESIEA 87 (464)
Q Consensus 14 ~~il~~~~~~~G--H--~~p~l~la~~L~~rGh~V~~~-~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 87 (464)
..|++.+..+.. . ...+..|++.|.++|++|.+. +++...+...+. ....++ .+- ...
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~---~l~---------g~~---- 242 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYV---EVL---------PKM---- 242 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTE---EEC---------CCC----
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcc---ccc---------CCC----
Confidence 356666655431 1 236889999998889998886 444333222210 001111 111 001
Q ss_pred HHHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEEecc
Q 012412 88 YLERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPFLTQ 143 (464)
Q Consensus 88 ~~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~~~~ 143 (464)
.+.++..-+.. .|++|+... ...++|..+|+|++.++..
T Consensus 243 -----------sl~el~ali~~----a~l~I~~DS--G~~HlAaa~g~P~v~lfg~ 281 (326)
T 2gt1_A 243 -----------SLEGVARVLAG----AKFVVSVDT--GLSHLTAALDRPNITVYGP 281 (326)
T ss_dssp -----------CHHHHHHHHHT----CSEEEEESS--HHHHHHHHTTCCEEEEESS
T ss_pred -----------CHHHHHHHHHh----CCEEEecCC--cHHHHHHHcCCCEEEEECC
Confidence 12233333322 489998533 3566788899999987643
No 342
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=28.17 E-value=84 Score=31.11 Aligned_cols=28 Identities=14% Similarity=0.233 Sum_probs=22.8
Q ss_pred cccccceeccCChh------HHHHHHHhCCcEeccC
Q 012412 350 HEATGCFVTHCGWN------STMEALSLGVPMVAMP 379 (464)
Q Consensus 350 ~~~~~~vI~HgG~~------s~~eal~~GvP~v~~P 379 (464)
+..+ ++++.|-| .+.||-+-++|+|++-
T Consensus 71 ~pgv--~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 71 QPVA--VIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp SCEE--EEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CCEE--EEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 3455 89999966 6799999999999964
No 343
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=28.14 E-value=56 Score=29.73 Aligned_cols=38 Identities=13% Similarity=0.072 Sum_probs=32.4
Q ss_pred cEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.+|+| ..-||-|-..-..+||..|+++|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46665 555677999999999999999999999999876
No 344
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=28.03 E-value=47 Score=29.33 Aligned_cols=32 Identities=19% Similarity=0.074 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|||.|+-.|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 478887665544 36889999999999998754
No 345
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=27.96 E-value=1.8e+02 Score=26.71 Aligned_cols=131 Identities=9% Similarity=0.019 Sum_probs=67.2
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhcccccccee
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 357 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI 357 (464)
.+-.|.+|.++......+..+...+... +.+++-++..+ ....+.+.+++..+ .-|-...++|.+.++-+|+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~--~~~a~~~a~~~g~~-----~~y~d~~ell~~~~iDaV~ 99 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEAN--AGLAEARAGEFGFE-----KATADWRALIADPEVDVVS 99 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC----TTHHHHHHHHTCS-----EEESCHHHHHHCTTCCEEE
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCC--HHHHHHHHHHhCCC-----eecCCHHHHhcCCCCcEEE
Confidence 4678888877631112222233334333 34666555443 12223343332111 1245678888765544465
Q ss_pred ccC----ChhHHHHHHHhCCcEec-cCCccc--h-hhHHHHHHhHhcceeecc---CcCHHHHHHHHHHHhcC
Q 012412 358 THC----GWNSTMEALSLGVPMVA-MPQWSD--Q-STNAKYILDVWKTGLKFP---IVKRDAIADCISEILEG 419 (464)
Q Consensus 358 ~Hg----G~~s~~eal~~GvP~v~-~P~~~D--Q-~~na~rl~~~~G~g~~l~---~~~~~~l~~~i~~ll~~ 419 (464)
--- =..-+.+||.+|+++++ -|+..+ | ..-.+..++. |+=+.+. .+++ ..+.+++++.+
T Consensus 100 IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~-g~~l~vg~~~R~~p--~~~~~k~~i~~ 169 (393)
T 4fb5_A 100 VTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATAERS-GKVAALGYNYIQNP--VMRHIRKLVGD 169 (393)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHS-SSCEEECCGGGGCH--HHHHHHHHHHT
T ss_pred ECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhHHhc-CCccccccccccCh--HHHHHHHHHHc
Confidence 221 14567899999999999 887653 2 2233344455 5545444 3443 34445555544
No 346
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=27.92 E-value=63 Score=30.05 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.++|||++..+ .-...+++++.+.|++|..+....
T Consensus 10 ~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 10 AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCC
Confidence 45799998543 234778999999999998887644
No 347
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=27.90 E-value=61 Score=27.65 Aligned_cols=38 Identities=3% Similarity=0.067 Sum_probs=21.6
Q ss_pred CCCcEEEEEcCCCc--cChHHHHHH----HHHHHhC--CC-eEEEEe
Q 012412 11 CKLAHCLVLTYPGQ--GHINPLLQF----SRRLQHK--GI-KVTLVT 48 (464)
Q Consensus 11 ~~~~~il~~~~~~~--GH~~p~l~l----a~~L~~r--Gh-~V~~~~ 48 (464)
..|||||++..+.+ |.-.-...| ++.|.++ || +|+++-
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~id 48 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQIN 48 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 34789997766654 333333444 4445444 57 887654
No 348
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=27.85 E-value=36 Score=30.75 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=26.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
...++||.|+-.|..| ..+|+.|+++||+|++...
T Consensus 6 ~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred ccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 3456789998655444 3688999999999988754
No 349
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=27.84 E-value=60 Score=30.25 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=33.4
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 16 CLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 16 il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
+++...++.|-..-++.++..++.+|..|.|++.+...+
T Consensus 77 i~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E~s~~ 115 (366)
T 1xp8_A 77 TEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALD 115 (366)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred EEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECCCChh
Confidence 557777888999999999999999999999999986443
No 350
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=27.80 E-value=74 Score=28.18 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=26.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+.+++.++.| + =.++|+.|+++|.+|.+....
T Consensus 30 KvalVTGas~G-I--G~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 30 KIAVITGATSG-I--GLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCcCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 78899988775 2 267899999999999887753
No 351
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=27.78 E-value=95 Score=26.73 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=23.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|.++++.++ |-+- .++++.|+++|++|.++....
T Consensus 5 k~vlVTGas-~giG--~~ia~~l~~~G~~V~~~~r~~ 38 (255)
T 2q2v_A 5 KTALVTGST-SGIG--LGIAQVLARAGANIVLNGFGD 38 (255)
T ss_dssp CEEEESSCS-SHHH--HHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEeCCC-cHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 455566554 3332 578999999999999876543
No 352
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=27.76 E-value=80 Score=25.35 Aligned_cols=28 Identities=21% Similarity=0.260 Sum_probs=24.0
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCC
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSD 307 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 307 (464)
.+|+++||....+...+...+++|++.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998778888888899998764
No 353
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=27.70 E-value=71 Score=28.44 Aligned_cols=38 Identities=21% Similarity=0.307 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCccChHHH--HHHHHHHHhCC-CeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPL--LQFSRRLQHKG-IKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~--l~la~~L~~rG-h~V~~~~~~ 50 (464)
++.|||+++.. .+|-.+. ..|++.|.+.| ++|++...+
T Consensus 3 ~~~kvLiv~G~-~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITGQ-NNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEESC-CSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcCC-CCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 46799999444 4786443 57788888888 999999864
No 354
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=27.68 E-value=24 Score=29.88 Aligned_cols=33 Identities=6% Similarity=0.140 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|||+++-. |.+ -..+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 46777753 332 3578999999999999998643
No 355
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=27.50 E-value=1.9e+02 Score=21.51 Aligned_cols=47 Identities=9% Similarity=0.051 Sum_probs=33.3
Q ss_pred hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 371 ~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
..+|++++--.. .........+. |+--.+. .++.++|..+|++++..
T Consensus 76 ~~~~ii~ls~~~-~~~~~~~~~~~-g~~~~l~kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 76 PHMAVIILTGHG-DLDNAILAMKE-GAFEYLRKPVTAQDLSIAINNAINR 123 (143)
T ss_dssp TTCEEEEEECTT-CHHHHHHHHHT-TCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCC-CHHHHHHHHHh-CcceeEeCCCCHHHHHHHHHHHHHH
Confidence 468888765433 33445556667 7665565 89999999999999865
No 356
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=27.47 E-value=18 Score=35.07 Aligned_cols=61 Identities=11% Similarity=0.109 Sum_probs=38.5
Q ss_pred hccccccceeccCCh-----hHHHHHHHhCCcEeccCCccchhhHHHHHHhHhcceeecc--CcCHHHHHHHH
Q 012412 348 LAHEATGCFVTHCGW-----NSTMEALSLGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP--IVKRDAIADCI 413 (464)
Q Consensus 348 l~~~~~~~vI~HgG~-----~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~--~~~~~~l~~~i 413 (464)
+..+|+ ||.=-|. =+++-|-.+|++-++.= ...+.+...+++. |+...+. ..+...+.+.+
T Consensus 298 i~~~D~--~ia~T~~De~Ni~~~llAk~~gv~kvIa~--vn~~~~~~l~~~~-gid~visp~~~~a~~I~~~i 365 (461)
T 4g65_A 298 IDQVDV--FIALTNEDETNIMSAMLAKRMGAKKVMVL--IQRGAYVDLVQGG-VIDVAISPQQATISALLTHV 365 (461)
T ss_dssp GGGCSE--EEECCSCHHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHCSS-SSCEEECHHHHHHHHHHHHH
T ss_pred chhhcE--EEEcccCcHHHHHHHHHHHHcCCcccccc--ccccchhhhhhcc-ccceeeCHHHHHHHHHHHHh
Confidence 356777 7776663 25566677888876653 3455667777788 8887775 44444454444
No 357
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=27.46 E-value=77 Score=27.40 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+++++.++. -+ =.++++.|+++|++|.++....
T Consensus 3 k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r~~ 36 (258)
T 3a28_C 3 KVAMVTGGAQ-GI--GRGISEKLAADGFDIAVADLPQ 36 (258)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHHTCEEEEEECGG
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 4556665543 33 2478999999999999887543
No 358
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=27.31 E-value=63 Score=26.08 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=29.3
Q ss_pred cEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLVLTYPGQ---GHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~~~~~~~---GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
-+|+++|.-|. ---.+...|++.|.++|.+|.|.-+|..
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 65 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 65 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 36777765433 1235888999999999999999999743
No 359
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=27.25 E-value=46 Score=30.31 Aligned_cols=37 Identities=19% Similarity=0.158 Sum_probs=22.9
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
..++++||+. |+.|.+-. .|++.|.++||+|+.+...
T Consensus 16 ~~~~~~vlVt--GatG~iG~--~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVT--GSAGRVGR--AVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -----CEEEE--TTTSHHHH--HHHHHHHHTTCCEEEEESS
T ss_pred ccCCCEEEEE--CCCChHHH--HHHHHHHhCCCEEEEEeCC
Confidence 3445667665 33454443 5789999999999998754
No 360
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=27.21 E-value=33 Score=31.05 Aligned_cols=35 Identities=6% Similarity=0.101 Sum_probs=25.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEeC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGI-KVTLVTT 49 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh-~V~~~~~ 49 (464)
...++||.|+-.|..| ..+|+.|+++|| +|++...
T Consensus 21 ~~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 21 QSNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred cCCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 3456899998665555 478999999999 9998876
No 361
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=27.20 E-value=40 Score=33.02 Aligned_cols=37 Identities=16% Similarity=0.345 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
..+.||+++-.+..| +.+|+.|.++|++||++....+
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCCC
Confidence 346799988665444 5778999989999999987543
No 362
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=27.11 E-value=2e+02 Score=25.92 Aligned_cols=118 Identities=11% Similarity=0.004 Sum_probs=63.5
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhc--cccccce
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA--HEATGCF 356 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~--~~~~~~v 356 (464)
+.+|.+|.++ ..++.++.+. +..++.++..+.. -.+.+.++ -++. +-...+++. .+|+ |
T Consensus 6 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~~--~~~~~~~~----~~~~---~~~~~~~l~~~~~D~--V 67 (331)
T 4hkt_A 6 FGLLGAGRIG-------KVHAKAVSGNADARLVAVADAFPA--AAEAIAGA----YGCE---VRTIDAIEAAADIDA--V 67 (331)
T ss_dssp EEEECCSHHH-------HHHHHHHHHCTTEEEEEEECSSHH--HHHHHHHH----TTCE---ECCHHHHHHCTTCCE--E
T ss_pred EEEECCCHHH-------HHHHHHHhhCCCcEEEEEECCCHH--HHHHHHHH----hCCC---cCCHHHHhcCCCCCE--E
Confidence 5677777665 2355566654 4565555543211 11222222 1222 556678887 5565 6
Q ss_pred eccCC----hhHHHHHHHhCCcEec-cCCccc--h-hhHHHHHHhHhcceeecc---CcCHHHHHHHHHHHhc
Q 012412 357 VTHCG----WNSTMEALSLGVPMVA-MPQWSD--Q-STNAKYILDVWKTGLKFP---IVKRDAIADCISEILE 418 (464)
Q Consensus 357 I~HgG----~~s~~eal~~GvP~v~-~P~~~D--Q-~~na~rl~~~~G~g~~l~---~~~~~~l~~~i~~ll~ 418 (464)
+---- ...+.+|+.+|+++++ -|+..+ + ..-.+..++. |+-+.+. .+++ ..+.+++++.
T Consensus 68 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~-g~~~~v~~~~r~~p--~~~~~~~~i~ 137 (331)
T 4hkt_A 68 VICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDT-KAKLMVGFNRRFDP--HFMAVRKAID 137 (331)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHT-TCCEEECCGGGGCH--HHHHHHHHHH
T ss_pred EEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHc-CCeEEEcccccCCH--HHHHHHHHHH
Confidence 63222 4567889999999988 676542 2 2234445566 7666655 3433 2344455543
No 363
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=27.10 E-value=2.6e+02 Score=22.86 Aligned_cols=47 Identities=17% Similarity=0.252 Sum_probs=32.0
Q ss_pred hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcCC
Q 012412 371 LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEGE 420 (464)
Q Consensus 371 ~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~~ 420 (464)
..+|+|++--..+......+..+. |+--.+. .++ .|.++|++++...
T Consensus 150 ~~~piI~ls~~~~~~~~~~~~~~~-Ga~~~l~KP~~--~L~~~i~~~l~~~ 197 (206)
T 3mm4_A 150 VRTPIIAVSGHDPGSEEARETIQA-GMDAFLDKSLN--QLANVIREIESKR 197 (206)
T ss_dssp CCCCEEEEESSCCCHHHHHHHHHH-TCSEEEETTCT--THHHHHHHHC---
T ss_pred CCCcEEEEECCCCcHHHHHHHHhC-CCCEEEcCcHH--HHHHHHHHHHhhh
Confidence 468998887665344556666677 8766665 555 9999999998764
No 364
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=27.09 E-value=1.2e+02 Score=21.56 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
..+|++++..+ ......++.|.+.|++|..+..
T Consensus 56 ~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 56 NETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 45788777544 5677889999999998887655
No 365
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=27.07 E-value=56 Score=29.39 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=22.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+||+.- +.|-+- ..|++.|.++||+|+.+...
T Consensus 2 ~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICG--GAGYIG--SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEC--CCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 4666553 234333 56789999999999998753
No 366
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=26.98 E-value=40 Score=30.24 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+++||.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 14 ~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 356898987766665 5788899999999987653
No 367
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=26.96 E-value=21 Score=32.21 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.+.+|+++-.|..| +..|..|+++|++|+++....
T Consensus 6 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 34578888766545 678888999999999997753
No 368
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=26.77 E-value=1.1e+02 Score=25.93 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCC-CeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKG-IKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rG-h~V~~~~~~~ 51 (464)
|+.++++.++ |-+- ..+++.|.++| |+|+.+....
T Consensus 23 mk~vlVtGat-G~iG--~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAG-GQIA--RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTT-SHHH--HHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCC-cHHH--HHHHHHHHhCCCceEEEEEcCh
Confidence 4544444433 3333 47889999999 9999988643
No 369
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=26.76 E-value=65 Score=26.10 Aligned_cols=39 Identities=15% Similarity=0.183 Sum_probs=29.3
Q ss_pred cEEEEEcCCCc--c-ChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLVLTYPGQ--G-HINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~~~~~~~--G-H~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
-+|+++|.-|. . --.+...|++.|.++|.+|.|.-+|..
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 64 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVA 64 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 36777765433 2 234888999999999999999998743
No 370
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=26.76 E-value=80 Score=25.13 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=25.9
Q ss_pred cEEEEEcCCCccChHHHH-HHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGHINPLL-QFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l-~la~~L~~rGh~V~~~~~ 49 (464)
|||+++-.+.+|+..-+. .+++.|.+.|++|.++--
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 567766666678887555 468888889999877654
No 371
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=26.69 E-value=78 Score=27.08 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=22.6
Q ss_pred cEEEEEcCCCccC-hHH--HHHHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGH-INP--LLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH-~~p--~l~la~~L~~rGh~V~~~~~ 49 (464)
||||++..+...+ .+. ...+++.|.++||+|.++--
T Consensus 2 mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 2 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 6898766554432 222 23356667777999998754
No 372
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=26.62 E-value=66 Score=29.92 Aligned_cols=40 Identities=13% Similarity=0.079 Sum_probs=32.5
Q ss_pred CCCcEEE-EEc-CCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 11 CKLAHCL-VLT-YPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 11 ~~~~~il-~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+++|++ |++ -||-|-..-...||..|+++|++|.++-..
T Consensus 140 ~~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 140 NDKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TTSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3456665 554 567799999999999999999999999865
No 373
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=26.62 E-value=1e+02 Score=25.48 Aligned_cols=37 Identities=14% Similarity=0.003 Sum_probs=28.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
..++++..+..|...-...+++.|.++|+.|..+-..
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 3455555666677778899999999999998777643
No 374
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=26.55 E-value=34 Score=29.13 Aligned_cols=34 Identities=9% Similarity=0.186 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
+++|||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 346799988654444 4678899999999998544
No 375
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=26.52 E-value=63 Score=26.59 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCc---cChHHHH-HHHHHHHhCC--CeEEEEeC
Q 012412 13 LAHCLVLTYPGQ---GHINPLL-QFSRRLQHKG--IKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~---GH~~p~l-~la~~L~~rG--h~V~~~~~ 49 (464)
|||||++..+.+ |+...+. .+++.|.++| ++|.++--
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 468997666655 5555444 3466676666 88877654
No 376
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=26.45 E-value=36 Score=29.29 Aligned_cols=28 Identities=29% Similarity=0.372 Sum_probs=21.1
Q ss_pred CcEEEEEcCCCcc--ChHHHHHHHHHHHhC
Q 012412 13 LAHCLVLTYPGQG--HINPLLQFSRRLQHK 40 (464)
Q Consensus 13 ~~~il~~~~~~~G--H~~p~l~la~~L~~r 40 (464)
+++||+.-++-+| -+||...++++|...
T Consensus 23 mk~VLvTGF~PF~g~~~NPS~~~v~~L~~~ 52 (228)
T 4hps_A 23 MKTILVTAFDPFGGEAINPSWEAIKPLQGS 52 (228)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHGGGTTC
T ss_pred CCEEEEEeccCCCCCCCChHHHHHHHhcCc
Confidence 6789875555443 579999999999764
No 377
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=26.43 E-value=1e+02 Score=25.50 Aligned_cols=39 Identities=5% Similarity=-0.095 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCccC----hHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 11 CKLAHCLVLTYPGQGH----INPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH----~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
..+++|.++.... +. ..-...|++.|+++|+.|.+-..+
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 3357898776654 33 345678888899999988776544
No 378
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=26.43 E-value=52 Score=32.85 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=33.1
Q ss_pred CCcEEEEE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 12 KLAHCLVL-TYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 12 ~~~~il~~-~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
++.+|+|+ ..||-|-..-...||..|+++|++|.++....
T Consensus 6 ~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 44567654 44566999999999999999999999999875
No 379
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=26.32 E-value=52 Score=29.40 Aligned_cols=33 Identities=9% Similarity=0.152 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
++||.|+-.|..|. .+|+.|.++||+|+++...
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 57899996666553 6788999999999988653
No 380
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=26.31 E-value=69 Score=27.75 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=29.6
Q ss_pred EEE-E-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCL-V-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il-~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+++ | -.-++-|-..-...||..|+++|++|.++=...
T Consensus 3 ~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 3 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 444 4 345566999999999999999999999987543
No 381
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=26.20 E-value=74 Score=28.03 Aligned_cols=41 Identities=20% Similarity=0.305 Sum_probs=31.5
Q ss_pred CCcEEEEEc--CCCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 12 KLAHCLVLT--YPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 12 ~~~~il~~~--~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
+.+|++.++ .++-|-..-...||..|+++|.+|.++-....
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 345665443 35679999999999999999999999876543
No 382
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=26.20 E-value=1.8e+02 Score=23.52 Aligned_cols=98 Identities=20% Similarity=0.163 Sum_probs=0.0
Q ss_pred hHHHHHhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcC--cccCcCChhhhhhccCCCcEEEEeccC
Q 012412 266 EACMKWLNDRAKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRE--SEQAKLPKKFSDETLTSHKSLVVSWCP 343 (464)
Q Consensus 266 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~p 343 (464)
.++-++|.++. ...|+-|... .+....++..+.+.+++=+.+. -..+..+.. .-......+..+
T Consensus 23 ~~lg~~La~~g---~~lV~Ggg~G-----iM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~------~~~~~~~~~~f~ 88 (171)
T 1weh_A 23 VRYGEVLAEEG---FGLACGGYQG-----GMEALARGVKAKGGLVVGVTAPAFFPERRGPNP------FVDLELPAATLP 88 (171)
T ss_dssp HHHHHHHHHTT---EEEEECCSST-----HHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCT------TCSEECCCSSHH
T ss_pred HHHHHHHHHCC---CEEEeCChhh-----HHHHHHHHHHHcCCcEEEEeccccCcccccccC------CCceeeecCCHH
Q ss_pred hH-HhhccccccceeccCChhHH---HHHHH-------hCCcEecc
Q 012412 344 QL-EVLAHEATGCFVTHCGWNST---MEALS-------LGVPMVAM 378 (464)
Q Consensus 344 ~~-~ll~~~~~~~vI~HgG~~s~---~eal~-------~GvP~v~~ 378 (464)
.. .++...+-..++--||+||+ .|++. +++| +++
T Consensus 89 ~Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll 133 (171)
T 1weh_A 89 QRIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAV 133 (171)
T ss_dssp HHHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEE
T ss_pred HHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEE
No 383
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=26.15 E-value=1.9e+02 Score=21.10 Aligned_cols=46 Identities=7% Similarity=0.108 Sum_probs=33.0
Q ss_pred CCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 372 GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 372 GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
.+|++++--..+ .....+..+. |+--.+. .++.++|.++|+.++..
T Consensus 81 ~~pii~~s~~~~-~~~~~~~~~~-g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 81 EIPIIMITAEGG-KAEVITALKA-GVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp TCCEEEEESCCS-HHHHHHHHHH-TCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred CCeEEEEeCCCC-hHHHHHHHHc-CccEEEeCCCCHHHHHHHHHHHhcc
Confidence 578887764433 3344455667 7766666 89999999999999865
No 384
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=25.97 E-value=1.8e+02 Score=24.16 Aligned_cols=40 Identities=18% Similarity=0.123 Sum_probs=28.6
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+.-+.||+|+-.++.- ..-+....+.|...|++|++++..
T Consensus 6 ~~m~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 6 QGMSKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp ---CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccCCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 3334689887777654 455566678888999999999985
No 385
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=25.85 E-value=1.1e+02 Score=26.02 Aligned_cols=37 Identities=8% Similarity=0.023 Sum_probs=26.4
Q ss_pred cEEEEEcCCCccC--hHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGH--INPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH--~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
..++++..|..|+ ...+..+++.|.++|+.|..+-.+
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 3455544555555 666889999999999998877554
No 386
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=25.84 E-value=43 Score=30.49 Aligned_cols=36 Identities=17% Similarity=0.180 Sum_probs=25.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+++..||.|+-.|..| .++|..|+++||+|++.-..
T Consensus 3 ~~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 3 SPAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3456789988666555 46788899999999988654
No 387
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=25.83 E-value=1.3e+02 Score=28.88 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=35.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
+..|+++..+|.|-..-+..||..|+++|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 345567777888999999999999999999999999876544
No 388
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=25.73 E-value=72 Score=28.69 Aligned_cols=31 Identities=10% Similarity=0.196 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (464)
|.||-|+-.+..|. ++|+.|.++||+|++.-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 45899999888884 78999999999998874
No 389
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=25.70 E-value=1.3e+02 Score=29.84 Aligned_cols=77 Identities=12% Similarity=0.038 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCcc-cCcCChhhhhhccCCCcEEEEeccC--------hH--HhhccccccceeccCCh
Q 012412 294 EEMEELAWGLKSSDQHFLWVVRESE-QAKLPKKFSDETLTSHKSLVVSWCP--------QL--EVLAHEATGCFVTHCGW 362 (464)
Q Consensus 294 ~~~~~~~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~~p--------~~--~ll~~~~~~~vI~HgG~ 362 (464)
..-+.+++.|++.|.+.++.++++. ...+-+.+ . + ++.+.-.. .- .+-.+..+ +++|.|-
T Consensus 13 ~~a~~l~~~L~~~GV~~vfg~PG~~~~~~l~~al-----~-~-i~~i~~~~E~~Aa~~A~Gyar~tg~p~v--~~~TsGp 83 (573)
T 2iht_A 13 TAAHALLSRLRDHGVGKVFGVVGREAASILFDEV-----E-G-IDFVLTRHEFTAGVAADVLARITGRPQA--CWATLGP 83 (573)
T ss_dssp CHHHHHHHHHHHTTCCEEEECCCGGGGTCCSCSS-----T-T-CEEEECSSHHHHHHHHHHHHHHHCSCEE--EEECTTH
T ss_pred cHHHHHHHHHHHCCCCEEEEecCCcchhHHHHHH-----c-C-CeEEeeCCHHHHHHHHHHHHHHHCCCEE--EEEccCc
Confidence 3456788888999999888888876 55554443 1 2 44443221 11 22233445 8899986
Q ss_pred h------HHHHHHHhCCcEeccC
Q 012412 363 N------STMEALSLGVPMVAMP 379 (464)
Q Consensus 363 ~------s~~eal~~GvP~v~~P 379 (464)
| .+.||-+.++|+|++-
T Consensus 84 G~~N~~~~v~~A~~~~~Pll~it 106 (573)
T 2iht_A 84 GMTNLSTGIATSVLDRSPVIALA 106 (573)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hHHHHHHHHHHHHhhCCCEEEEc
Confidence 5 5789999999999963
No 390
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=25.64 E-value=81 Score=32.17 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=47.0
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccC--------hH--HhhccccccceeccCCh--
Q 012412 295 EMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCP--------QL--EVLAHEATGCFVTHCGW-- 362 (464)
Q Consensus 295 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p--------~~--~ll~~~~~~~vI~HgG~-- 362 (464)
.-+.+++.|++.|.+.|+.++++....+-+.+. ..+.++.+.-.. .- .+-.+..+ ++++.|-
T Consensus 84 ~a~~lv~~L~~~GV~~vFg~PG~~~~pl~dal~----~~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgv--v~~TsGpG~ 157 (677)
T 1t9b_A 84 GGQIFNEMMSRQNVDTVFGYPGGAILPVYDAIH----NSDKFNFVLPKHEQGAGHMAEGYARASGKPGV--VLVTSGPGA 157 (677)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGHHHHHHTT----TCSSSEEECCSSHHHHHHHHHHHHHHHSSCEE--EEECSTHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCccHHHHHHHHH----hCCCCeEEEeCChHHHHHHHHHHHHHHCCCEE--EEECCChHH
Confidence 455677777777777777776654433333322 112344432221 11 22233445 8888885
Q ss_pred ----hHHHHHHHhCCcEeccC
Q 012412 363 ----NSTMEALSLGVPMVAMP 379 (464)
Q Consensus 363 ----~s~~eal~~GvP~v~~P 379 (464)
+.+.||-+.++|+|++-
T Consensus 158 ~N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 158 TNVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp HTTHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 47799999999999964
No 391
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=25.49 E-value=58 Score=25.27 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccChHHHH-HHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGHINPLL-QFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l-~la~~L~~rGh~V~~~~~ 49 (464)
|||+++-.+.+|+...+. .+++.|.++|++|.++.-
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 477765555567755433 356667777999987653
No 392
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=25.45 E-value=62 Score=29.14 Aligned_cols=37 Identities=22% Similarity=0.181 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.++++||+.- +.|.+- ..|++.|.++||+|+.+....
T Consensus 12 ~~~~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~~ 48 (335)
T 1rpn_A 12 SMTRSALVTG--ITGQDG--AYLAKLLLEKGYRVHGLVARR 48 (335)
T ss_dssp ---CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECCC
T ss_pred ccCCeEEEEC--CCChHH--HHHHHHHHHCCCeEEEEeCCC
Confidence 4567777653 334443 467899999999999988643
No 393
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=25.44 E-value=2.3e+02 Score=21.63 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=60.7
Q ss_pred cCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec-cChHHhhccccccceeccCChhHHHHH
Q 012412 290 ELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW-CPQLEVLAHEATGCFVTHCGWNSTMEA 368 (464)
Q Consensus 290 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-~p~~~ll~~~~~~~vI~HgG~~s~~ea 368 (464)
...+.....+...|+..++.+....... +.+ +.+.+ .+..+.+.++ +|.. .|. .+.+.
T Consensus 14 dd~~~~~~~l~~~L~~~g~~v~~~~~~~--~al-~~l~~---~~~dlii~D~~l~~~--------------~g~-~~~~~ 72 (154)
T 3gt7_A 14 EDSPTQAEHLKHILEETGYQTEHVRNGR--EAV-RFLSL---TRPDLIISDVLMPEM--------------DGY-ALCRW 72 (154)
T ss_dssp CSCHHHHHHHHHHHHTTTCEEEEESSHH--HHH-HHHTT---CCCSEEEEESCCSSS--------------CHH-HHHHH
T ss_pred eCCHHHHHHHHHHHHHCCCEEEEeCCHH--HHH-HHHHh---CCCCEEEEeCCCCCC--------------CHH-HHHHH
Confidence 4567777788888888887764432211 111 11111 2334445443 1211 122 23333
Q ss_pred HH-----hCCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 369 LS-----LGVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 369 l~-----~GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
+. ..+|+|++--..+ ........+. |+--.+. .++.+.|..+|++++..
T Consensus 73 lr~~~~~~~~pii~~s~~~~-~~~~~~~~~~-g~~~~l~KP~~~~~l~~~i~~~l~~ 127 (154)
T 3gt7_A 73 LKGQPDLRTIPVILLTILSD-PRDVVRSLEC-GADDFITKPCKDVVLASHVKRLLSG 127 (154)
T ss_dssp HHHSTTTTTSCEEEEECCCS-HHHHHHHHHH-CCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHhCCCcCCCCEEEEECCCC-hHHHHHHHHC-CCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 33 4678888764443 3344556667 7766666 89999999999999854
No 394
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=25.44 E-value=1.8e+02 Score=25.33 Aligned_cols=33 Identities=21% Similarity=0.188 Sum_probs=24.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 32 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 32 RTAVVTGAGSG-I--GRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEcCH
Confidence 56666666543 2 257899999999999988743
No 395
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=25.39 E-value=69 Score=27.88 Aligned_cols=40 Identities=18% Similarity=0.308 Sum_probs=30.3
Q ss_pred CcEEE-EE-cCCCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 13 LAHCL-VL-TYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 13 ~~~il-~~-~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
+++++ |. .-||-|=..-...||..|+++|++|.++=....
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~ 58 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFL 58 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 34554 43 344668999999999999999999999876543
No 396
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=25.35 E-value=75 Score=27.75 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=25.6
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
++...|+++++.++.| + =.++|++|+++|++|.+...
T Consensus 22 ~m~~~k~vlITGas~g-I--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 22 SMSDTPVVLVTGGSRG-I--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp --CCSCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred hccCCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcC
Confidence 3444567777776643 3 25889999999999988744
No 397
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=25.21 E-value=1.1e+02 Score=21.86 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
..+|++++..+ ......++.|.+.|++|.++..
T Consensus 56 ~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 56 NEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 45788777544 3567789999999998887755
No 398
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=25.09 E-value=60 Score=32.12 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=31.6
Q ss_pred CCCcEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 11 CKLAHCLVLTYPGQ---GHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 11 ~~~~~il~~~~~~~---GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
..|+|.++++.+.. |--.-.-+|++.|.+||++|+.+=...+
T Consensus 9 ~~~~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py 53 (550)
T 1vco_A 9 PRPRKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPY 53 (550)
T ss_dssp -CCCEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECS
T ss_pred ccceeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccc
Confidence 34568888885544 5556778899999999999999877533
No 399
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=25.05 E-value=2e+02 Score=20.96 Aligned_cols=45 Identities=9% Similarity=0.119 Sum_probs=30.3
Q ss_pred CCcEeccCCccchhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHhcC
Q 012412 372 GVPMVAMPQWSDQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEILEG 419 (464)
Q Consensus 372 GvP~v~~P~~~DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll~~ 419 (464)
.+|++++--..+... ....+. |+--.+. .++.+.|..+|++++..
T Consensus 77 ~~pii~~s~~~~~~~--~~~~~~-g~~~~l~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 77 HIPVIFVSGYAPRTE--GPADQP-VPDAYLVKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp TCCEEEEESCCC-------TTSC-CCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHhH--HHHhhc-CCceEEeccCCHHHHHHHHHHHHhh
Confidence 788888775554433 445555 6554555 89999999999999965
No 400
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=24.94 E-value=22 Score=18.23 Aligned_cols=17 Identities=24% Similarity=0.606 Sum_probs=13.6
Q ss_pred ChhHHHHHHHhCCcEec
Q 012412 361 GWNSTMEALSLGVPMVA 377 (464)
Q Consensus 361 G~~s~~eal~~GvP~v~ 377 (464)
|.|++.-.|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888764
No 401
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=24.89 E-value=1.1e+02 Score=30.73 Aligned_cols=28 Identities=18% Similarity=0.151 Sum_probs=22.6
Q ss_pred cccccceeccCChh------HHHHHHHhCCcEeccC
Q 012412 350 HEATGCFVTHCGWN------STMEALSLGVPMVAMP 379 (464)
Q Consensus 350 ~~~~~~vI~HgG~~------s~~eal~~GvP~v~~P 379 (464)
+..+ +++|.|-| .+.||-+.++|+|++-
T Consensus 75 ~~gv--~~~TsGpG~~N~~~gia~A~~~~vPvl~it 108 (603)
T 4feg_A 75 KIGV--CFGSAGPGGTHLMNGLYDAREDHVPVLALI 108 (603)
T ss_dssp SCEE--EEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CceE--EEecCCchHHHHHHHHHHHHHcCCCEEEEe
Confidence 3455 88998865 6899999999999864
No 402
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=24.84 E-value=31 Score=33.46 Aligned_cols=32 Identities=31% Similarity=0.352 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+||+|+-.|-.| |.-|..|+++|++|+++-.
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEEcc
Confidence 3468877555444 6678889999999999864
No 403
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=24.83 E-value=99 Score=24.78 Aligned_cols=29 Identities=21% Similarity=0.271 Sum_probs=23.4
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
+.|+++||....+.+.++..+..|.+...
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~~ 30 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCCC
Confidence 57999999987777888888888887543
No 404
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=24.79 E-value=99 Score=24.87 Aligned_cols=29 Identities=17% Similarity=0.227 Sum_probs=24.1
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCC
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSSD 307 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 307 (464)
..+|+++||....+...+...+++|++.+
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 36999999998777888888888888754
No 405
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=24.78 E-value=2.2e+02 Score=28.01 Aligned_cols=34 Identities=9% Similarity=0.040 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
..|++++..+. ..+.+++.|.+-|-+|..+++..
T Consensus 335 GKrv~i~~~~~-----~~~~l~~~l~ElGm~vv~~~t~~ 368 (533)
T 1mio_A 335 GKTACLYVGGS-----RSHTYMNMLKSFGVDSLVAGFEF 368 (533)
T ss_dssp TCEEEEEESSS-----HHHHHHHHHHHHTCEEEEEEESS
T ss_pred CCEEEEECCch-----HHHHHHHHHHHCCCEEEEEEecc
Confidence 34777755442 46677888888899999988644
No 406
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=24.69 E-value=66 Score=29.95 Aligned_cols=37 Identities=5% Similarity=0.065 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCcc-C---hHHHHHHHHHH-HhCCCeEEEEeC
Q 012412 13 LAHCLVLTYPGQG-H---INPLLQFSRRL-QHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~G-H---~~p~l~la~~L-~~rGh~V~~~~~ 49 (464)
++||+++..+..+ | +.-...++++| .++||+|..+-.
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 5799988766444 3 23468889999 999999998864
No 407
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=24.63 E-value=2.4e+02 Score=25.43 Aligned_cols=30 Identities=20% Similarity=0.298 Sum_probs=19.4
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCeE
Q 012412 277 KESVVYVSYGSFVELKAEEMEELAWGLKSSDQHF 310 (464)
Q Consensus 277 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 310 (464)
+..++.|+.|++. ....+..+.|++.|..+
T Consensus 201 g~dv~iva~G~~~----~~a~~Aa~~L~~~Gi~v 230 (324)
T 1w85_B 201 GKDITIIAYGAMV----HESLKAAAELEKEGISA 230 (324)
T ss_dssp CSSEEEEECTTHH----HHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEEecHHH----HHHHHHHHHHHhcCCCE
Confidence 4568999999886 34445555666555543
No 408
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=24.57 E-value=73 Score=26.34 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=29.2
Q ss_pred cEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLVLTYPGQ---GHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~~~~~~~---GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
-+|+++|.-+. ---.+...|++.|.++|.+|.|.-+|..
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 88 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 88 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 46777765432 1234788999999999999999999743
No 409
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=24.55 E-value=2.9e+02 Score=22.55 Aligned_cols=114 Identities=9% Similarity=0.065 Sum_probs=63.2
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEe-c----cChHHhhcccccc
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVS-W----CPQLEVLAHEATG 354 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~-~----~p~~~ll~~~~~~ 354 (464)
+++.-.|+.... ....+++.|.+.+..+-++........+..+..+. ..++ ..+ | +.+-++-..+|+
T Consensus 5 IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~--l~~~--~~d~~~~~~~~hi~l~~~aD~- 76 (181)
T 1g63_A 5 LLICATASINVI---NINHYIVELKQHFDEVNILFSPSSKNFINTDVLKL--FCDN--LYDEIKDPLLNHINIVENHEY- 76 (181)
T ss_dssp EEEEECSCGGGG---GHHHHHHHHTTTSSCEEEEECGGGGGTSCGGGGGG--TSSC--EECTTTCTTCCHHHHHHTCSE-
T ss_pred EEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHH--HhCC--cccccCCCCCccccccccCCE-
Confidence 555555666532 33455666666676666555444434444333333 4455 343 3 234455666775
Q ss_pred ceeccCChhHH-------------HHHHHhCCcEeccCCccc-------hhhHHHHHHhHhcceeecc
Q 012412 355 CFVTHCGWNST-------------MEALSLGVPMVAMPQWSD-------QSTNAKYILDVWKTGLKFP 402 (464)
Q Consensus 355 ~vI~HgG~~s~-------------~eal~~GvP~v~~P~~~D-------Q~~na~rl~~~~G~g~~l~ 402 (464)
.+|-=+-.||+ .-++..++|+++.|-.+. -..|-.+|.+. |+-+.-+
T Consensus 77 ~vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~-G~~iv~p 143 (181)
T 1g63_A 77 ILVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNN-DVKVYSP 143 (181)
T ss_dssp EEEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHTT-TCEECCC
T ss_pred EEEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHHC-CCEEECC
Confidence 24444444443 334778999999995542 13477778777 7654433
No 410
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=24.54 E-value=69 Score=27.77 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
++|.++++.++.| +- .++|+.|+++|++|.++...
T Consensus 6 ~~k~vlVTGas~g-IG--~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTKG-LG--KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTSH-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCch-hH--HHHHHHHHHCCCEEEEEcCC
Confidence 3467777766542 22 58899999999999988654
No 411
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=24.49 E-value=79 Score=28.26 Aligned_cols=101 Identities=12% Similarity=0.059 Sum_probs=53.8
Q ss_pred HHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcE-EEEeccChHHhhccccccceeccCChhHHHHHHHhCCcE
Q 012412 297 EELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKS-LVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGVPM 375 (464)
Q Consensus 297 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv-~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~GvP~ 375 (464)
..+++.+++.+..+++..+-. ..+++++.+. .+..+ -+ |+++ .=...|.+.+..|+.+|+..
T Consensus 155 ~~~~~~l~~~~~Dlivlagym--~il~~~~l~~--~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai~~G~k~ 217 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYM--QILSDDLSAF--LSGRCINI-----------HHSF--LPGFKGAKPYHQAHTRGVKL 217 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCC--SCCCHHHHHH--HTTSEEEE-----------ESSC--TTTTCSSCHHHHHHHHTCSE
T ss_pred HHHHHHHHHhCCCEEEhhhhh--hhcCHHHHhh--ccCCeEEE-----------Cccc--ccCCCCchHHHHHHHcCCCe
Confidence 445666666666666555432 4566655443 11111 11 2222 33345899999999999998
Q ss_pred eccCCcc--chhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHh
Q 012412 376 VAMPQWS--DQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEIL 417 (464)
Q Consensus 376 v~~P~~~--DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll 417 (464)
..+-... +..+.+.-+.+. -+.+. +.+.+.|.+.+.++-
T Consensus 218 tG~Tvh~v~~~lD~GpIi~Q~---~v~i~~~dt~~~L~~r~~~~e 259 (287)
T 3nrb_A 218 IGATAHFVTADLDEGPIIAQD---VEHVSHRDSAEDLVRKGRDIE 259 (287)
T ss_dssp EEEEEEECCSSSSCCCEEEEE---EEECCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEECCCCcCCCEEEEE---EEecCCCCCHHHHHHHHHHHH
Confidence 7765432 222222222222 22333 567777777665543
No 412
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=24.43 E-value=2.7e+02 Score=22.19 Aligned_cols=130 Identities=15% Similarity=0.163 Sum_probs=70.0
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhc--cccccceec
Q 012412 281 VYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLA--HEATGCFVT 358 (464)
Q Consensus 281 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~--~~~~~~vI~ 358 (464)
|-|-+||.+ +....++....|+.++..+-+-+-+. ...|+.+.+ +.. ..++ +|.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa--HR~p~~~~~------------------~~~~a~~~V--iIa 57 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA--HRTPELVEE------------------IVKNSKADV--FIA 57 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--TTCHHHHHH------------------HHHHCCCSE--EEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--cCCHHHHHH------------------HHHhcCCCE--EEE
Confidence 445566655 67788889999999998866666554 334443321 111 1144 666
Q ss_pred cCCh----hHHHHHHHhCCcEeccCCccchhhHHHHHHhH-h--cceee---cc-CcCHHHHHHHHHHHhcCCchHHHHH
Q 012412 359 HCGW----NSTMEALSLGVPMVAMPQWSDQSTNAKYILDV-W--KTGLK---FP-IVKRDAIADCISEILEGERGKELRR 427 (464)
Q Consensus 359 HgG~----~s~~eal~~GvP~v~~P~~~DQ~~na~rl~~~-~--G~g~~---l~-~~~~~~l~~~i~~ll~~~~~~~~~~ 427 (464)
=.|. .++.-+ ..-+|++.+|....-......+.-. + |+.+. ++ .+++.-++..|- -+.|+ ++++
T Consensus 58 ~AG~aa~Lpgvva~-~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~I~~~~nAa~lA~~Il-~~~d~---~l~~ 132 (157)
T 2ywx_A 58 IAGLAAHLPGVVAS-LTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILALEIL-ALKDE---NIAK 132 (157)
T ss_dssp EEESSCCHHHHHHT-TCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECCTTCHHHHHHHHHHHH-TTTCH---HHHH
T ss_pred EcCchhhhHHHHHh-ccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEecCCcHHHHHHHHHHH-hcCCH---HHHH
Confidence 5543 233333 3468999999832211222222222 0 33221 11 334444444333 23554 8888
Q ss_pred HHHHHHHHHHHH
Q 012412 428 NAGKWRKLAKEA 439 (464)
Q Consensus 428 ~a~~l~~~~~~~ 439 (464)
+.+.+++..++.
T Consensus 133 kl~~~r~~~~~~ 144 (157)
T 2ywx_A 133 KLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888888754
No 413
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=24.37 E-value=74 Score=26.65 Aligned_cols=32 Identities=9% Similarity=0.023 Sum_probs=26.9
Q ss_pred EEEEc-CCCccChHHHHHHHHHHHhCCCeEEEE
Q 012412 16 CLVLT-YPGQGHINPLLQFSRRLQHKGIKVTLV 47 (464)
Q Consensus 16 il~~~-~~~~GH~~p~l~la~~L~~rGh~V~~~ 47 (464)
|.+.+ -++-|-..-...||..|+++|++|.++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 44544 367799999999999999999999985
No 414
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=24.33 E-value=81 Score=28.57 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=32.7
Q ss_pred CcEEE-EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
..||+ +.--||-|=..-...||.+|+++|++|.++=-+.
T Consensus 47 ~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 47 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 56776 5555677999999999999999999999987663
No 415
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=24.33 E-value=75 Score=25.88 Aligned_cols=36 Identities=17% Similarity=0.094 Sum_probs=26.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
++++++..+. =.-.+.+|+.++++|+.|..+|....
T Consensus 80 ~vii~S~Sg~--n~~~ie~A~~ake~G~~vIaITs~~~ 115 (170)
T 3jx9_A 80 RVLIFTPDTE--RSDLLASLARYDAWHTPYSIITLGDV 115 (170)
T ss_dssp EEEEEESCSC--CHHHHHHHHHHHHHTCCEEEEESSCC
T ss_pred EEEEEeCCCC--CHHHHHHHHHHHHCCCcEEEEeCcch
Confidence 4555655542 22378999999999999999999333
No 416
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=24.28 E-value=90 Score=30.79 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=20.7
Q ss_pred ceeccCChh------HHHHHHHhCCcEeccC
Q 012412 355 CFVTHCGWN------STMEALSLGVPMVAMP 379 (464)
Q Consensus 355 ~vI~HgG~~------s~~eal~~GvP~v~~P 379 (464)
++++|.|-| .+.||-+.++|+|++-
T Consensus 70 v~~~tsGpG~~N~~~gv~~A~~~~~Pll~it 100 (552)
T 1ovm_A 70 ALLTTFGVGELSAMNGIAGSYAEHVPVLHIV 100 (552)
T ss_dssp EEEEETTHHHHHTHHHHHHHHHTTCCEEEEE
T ss_pred EEEEccCCcHHHHHHHHHHHhhhcCCEEEEE
Confidence 388888854 6789999999999975
No 417
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=24.28 E-value=68 Score=29.86 Aligned_cols=38 Identities=21% Similarity=0.391 Sum_probs=30.9
Q ss_pred cEEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.+|+|+.-.+. .-+.=++.|++.|.++|++|++..-+.
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~~ 251 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANEL 251 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBSS
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECCc
Confidence 58998888775 466566999999999999999887653
No 418
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=24.27 E-value=51 Score=31.53 Aligned_cols=39 Identities=8% Similarity=-0.007 Sum_probs=24.5
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 6 KKPTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+...+..|||.|+-.|..| +++|..|++ ||+|+.+-..
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp ------CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred ccccccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 34444567899988655444 356777887 9999988754
No 419
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=24.27 E-value=85 Score=28.29 Aligned_cols=33 Identities=9% Similarity=0.108 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhC-C-CeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHK-G-IKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~r-G-h~V~~~~~~ 50 (464)
.++|||++..+.. .++++.|++. | ++|..+...
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 4579999866554 4789999886 7 888887654
No 420
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=24.26 E-value=42 Score=30.09 Aligned_cols=33 Identities=15% Similarity=0.062 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
++||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4689998766655 36789999999999988543
No 421
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=24.24 E-value=1e+02 Score=24.81 Aligned_cols=29 Identities=14% Similarity=0.278 Sum_probs=24.3
Q ss_pred eEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012412 280 VVYVSYGSFVELKAEEMEELAWGLKSSDQ 308 (464)
Q Consensus 280 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 308 (464)
.+|+++||....+.+.+...+.+|++.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLSN 31 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCCC
Confidence 58999999987788888888899987643
No 422
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=24.23 E-value=72 Score=27.42 Aligned_cols=36 Identities=6% Similarity=0.158 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCc--cChHHHHH-HHHHHHhC-CCeEEEEe
Q 012412 13 LAHCLVLTYPGQ--GHINPLLQ-FSRRLQHK-GIKVTLVT 48 (464)
Q Consensus 13 ~~~il~~~~~~~--GH~~p~l~-la~~L~~r-Gh~V~~~~ 48 (464)
|||||++..+.+ |+...+.. +++.|.++ |++|.++-
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~d 40 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRT 40 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEEC
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 368997766654 66555444 46666666 99998774
No 423
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=24.23 E-value=1e+02 Score=26.59 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=22.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|.++++.++. -+- .++++.|+++|++|+++...
T Consensus 8 k~vlITGasg-giG--~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTGAGS-GIG--RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3455554443 233 57899999999999998754
No 424
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=24.17 E-value=20 Score=32.38 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhC-----C-CeEEEEeCcccccccc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHK-----G-IKVTLVTTRFFYKSLH 57 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~r-----G-h~V~~~~~~~~~~~~~ 57 (464)
+|||.|+-.|..|. .+|..|.++ | |+|+++..+...+.+.
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~ 53 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIR 53 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHH
Confidence 47999987666563 567888888 9 9999997743333343
No 425
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=24.15 E-value=90 Score=27.00 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=22.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|.++++.++ |-+- .++|+.|+++|++|.++...
T Consensus 9 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 9 KSALITGSA-RGIG--RAFAEAYVREGATVAIADID 41 (259)
T ss_dssp CEEEEETCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 445555544 3332 46899999999999888653
No 426
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=24.08 E-value=3.7e+02 Score=24.54 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=22.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
++|||+++ |+ |.+-. .+++.|. +.++|+++...
T Consensus 15 ~~mkilvl--Ga-G~vG~--~~~~~L~-~~~~v~~~~~~ 47 (365)
T 3abi_A 15 RHMKVLIL--GA-GNIGR--AIAWDLK-DEFDVYIGDVN 47 (365)
T ss_dssp -CCEEEEE--CC-SHHHH--HHHHHHT-TTSEEEEEESC
T ss_pred CccEEEEE--CC-CHHHH--HHHHHHh-cCCCeEEEEcC
Confidence 46899988 34 66654 4677785 56899887653
No 427
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=24.05 E-value=75 Score=26.35 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=29.2
Q ss_pred cEEEEEcCCCc---cChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLVLTYPGQ---GHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~~~~~~~---GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
-+|+++|.-+. =--.+...|++.|.++|.+|.|.-+|..
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 87 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVA 87 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCccC
Confidence 46777765432 1234788999999999999999999743
No 428
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=24.00 E-value=69 Score=31.30 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+||||+.-. .|-+- ..|++.|.++||+|+.++...
T Consensus 147 ~m~VLVTGa--tG~IG--~~l~~~L~~~G~~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAITGS--RGLVG--RALTAQLQTGGHEVIQLVRKE 181 (516)
T ss_dssp CCEEEEEST--TSHHH--HHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECC--CCHHH--HHHHHHHHHCCCEEEEEECCC
Confidence 678877543 34443 367899999999999998643
No 429
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=23.99 E-value=69 Score=32.01 Aligned_cols=28 Identities=25% Similarity=0.343 Sum_probs=22.6
Q ss_pred cccccceeccCChh------HHHHHHHhCCcEeccC
Q 012412 350 HEATGCFVTHCGWN------STMEALSLGVPMVAMP 379 (464)
Q Consensus 350 ~~~~~~vI~HgG~~------s~~eal~~GvP~v~~P 379 (464)
+..+ +++|.|-| .+.||-+.++|+|++-
T Consensus 75 ~p~v--~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 75 KPGI--CIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp SCEE--EEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEE--EEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 4455 88999955 6799999999999964
No 430
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=23.92 E-value=69 Score=24.34 Aligned_cols=41 Identities=15% Similarity=-0.016 Sum_probs=24.1
Q ss_pred HHHHHHHhcCCCCCccEEEeCCchhh--HHHHH---HHcCCccEEEec
Q 012412 100 LTELVEKMNGSDSPVDCIVYDSILLW--ALDVA---KKFGLLGAPFLT 142 (464)
Q Consensus 100 l~~~~~~l~~~~~p~DlVI~D~~~~~--~~~~A---~~~giP~v~~~~ 142 (464)
-.+.++.+.+ .+||+||.|...+. |..++ +..++|.|.++.
T Consensus 42 g~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 42 MQEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred HHHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 3444444443 34699999986632 33343 456899776543
No 431
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=23.92 E-value=81 Score=26.09 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFY 53 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~ 53 (464)
.|+||+++-..+.-.+. +....+.|.+.|++|++++.....
T Consensus 3 ~M~kV~ill~dGfe~~E-~~~p~~vl~~ag~~v~~~s~~~~~ 43 (194)
T 4gdh_A 3 HMVKVCLFVADGTDEIE-FSAPWGIFKRAEIPIDSVYVGENK 43 (194)
T ss_dssp --CCEEEEEETTCCHHH-HHHHHHHHHHTTCCEEEEEESSCT
T ss_pred CCCEEEEEECCCcCHHH-HHHHHHHHHHCCCeEEEEEEcCCC
Confidence 47789877666654433 344456788899999988865443
No 432
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=23.87 E-value=71 Score=26.57 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCc----cChHHHH-HHHHHHHhCC--CeEEEEeC
Q 012412 13 LAHCLVLTYPGQ----GHINPLL-QFSRRLQHKG--IKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~----GH~~p~l-~la~~L~~rG--h~V~~~~~ 49 (464)
|||||++..+.+ |+...+. .+++.|.++| ++|.++--
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 368987666655 4444443 3466666667 89887753
No 433
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=23.77 E-value=76 Score=26.22 Aligned_cols=37 Identities=5% Similarity=-0.022 Sum_probs=24.9
Q ss_pred CcEEEEEcCCC--ccChHHHHH-HHHH-HHhCCCeEEEEeC
Q 012412 13 LAHCLVLTYPG--QGHINPLLQ-FSRR-LQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~--~GH~~p~l~-la~~-L~~rGh~V~~~~~ 49 (464)
||||+++..+. .|+..-+.. +++. |.++|++|.++--
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 46899777664 466555554 4566 7778998887653
No 434
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=23.77 E-value=1.5e+02 Score=24.91 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=27.4
Q ss_pred cEEEEEcCC---------CccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYP---------GQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~---------~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+||+|+-.. ..-...=+....+.|.+.|++|++++...
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 488876552 22344566677888889999999999854
No 435
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=23.71 E-value=80 Score=28.73 Aligned_cols=39 Identities=13% Similarity=0.081 Sum_probs=32.0
Q ss_pred cEEEE-EcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLV-LTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~-~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
.+|+| ..-||-|-..-...||..|+++|++|.++..+..
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 45665 4555669999999999999999999999988654
No 436
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=23.68 E-value=81 Score=31.22 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=20.8
Q ss_pred ceeccCC------hhHHHHHHHhCCcEeccC
Q 012412 355 CFVTHCG------WNSTMEALSLGVPMVAMP 379 (464)
Q Consensus 355 ~vI~HgG------~~s~~eal~~GvP~v~~P 379 (464)
+++++.| .+.+.||-+.++|+|++.
T Consensus 69 v~~~TsGpG~~N~~~gia~A~~~~~Pll~it 99 (563)
T 2vk8_A 69 CIITTFGVGELSALNGIAGSYAEHVGVLHVV 99 (563)
T ss_dssp EEEEETTHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEcCCCcHHHHHHHHHHHHhhCCCEEEEE
Confidence 3888888 456899999999999974
No 437
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=23.67 E-value=1.6e+02 Score=26.83 Aligned_cols=107 Identities=12% Similarity=-0.033 Sum_probs=56.9
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhcc--ccccc
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAH--EATGC 355 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~--~~~~~ 355 (464)
.+.+|.+|.++. ..++.++.+. +..++.++..+.. ..+.+.++. ++. .+-...+++.. .|+
T Consensus 29 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~~--~~~~~a~~~----g~~--~~~~~~~ll~~~~~D~-- 92 (350)
T 3rc1_A 29 RVGVIGCADIAW------RRALPALEAEPLTEVTAIASRRWD--RAKRFTERF----GGE--PVEGYPALLERDDVDA-- 92 (350)
T ss_dssp EEEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESSHH--HHHHHHHHH----CSE--EEESHHHHHTCTTCSE--
T ss_pred EEEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCCHH--HHHHHHHHc----CCC--CcCCHHHHhcCCCCCE--
Confidence 467777776642 1355666665 4565555543211 112222221 111 23456788875 455
Q ss_pred eeccCC----hhHHHHHHHhCCcEec-cCCccc--hhh-HHHHHHhHhcceeecc
Q 012412 356 FVTHCG----WNSTMEALSLGVPMVA-MPQWSD--QST-NAKYILDVWKTGLKFP 402 (464)
Q Consensus 356 vI~HgG----~~s~~eal~~GvP~v~-~P~~~D--Q~~-na~rl~~~~G~g~~l~ 402 (464)
|+---- ...+.+|+.+|+++++ -|+..+ +.. -.+..++. |+-+.+.
T Consensus 93 V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~-g~~~~v~ 146 (350)
T 3rc1_A 93 VYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARER-GLLLMEN 146 (350)
T ss_dssp EEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHT-TCCEEEE
T ss_pred EEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHh-CCEEEEE
Confidence 653222 3567889999999988 687653 222 33444455 6555544
No 438
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=23.58 E-value=82 Score=28.59 Aligned_cols=34 Identities=15% Similarity=0.045 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+++||+. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 25 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4577665 3345444 46889999999999999864
No 439
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=23.52 E-value=1e+02 Score=28.18 Aligned_cols=32 Identities=22% Similarity=0.094 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
+|||+|+ |--+....+.++|.++||+|..+.+
T Consensus 22 ~mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 22 SMKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 4899998 2224444567899999999876654
No 440
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=23.51 E-value=71 Score=28.87 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=22.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
++||+. |+.|-+- ..|++.|.++||+|+.+..
T Consensus 2 ~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 2 AKLLIT--GGCGFLG--SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEe--CCCchhH--HHHHHHHHhCCCEEEEEeC
Confidence 456554 3334443 4678999999999999864
No 441
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=23.48 E-value=1.3e+02 Score=26.96 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcE-EEEeccChHHhhccccccceeccCChhHHHHHHHh
Q 012412 293 AEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKS-LVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSL 371 (464)
Q Consensus 293 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv-~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~ 371 (464)
.+.-.++++.+++.+..+++..+-. ..+++++.+. .+..+ -+ |+++ .=...|.+.+..|+..
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym--~IL~~~~l~~--~~~~~INi-----------HpSl--LP~frG~~p~~~Ai~~ 229 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYM--QILPPQLCRE--YAHQVINI-----------HHSF--LPSFVGAKPYHQASLR 229 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCC--SCCCTTHHHH--TTTCEEEE-----------ESSC--TTSSCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhh--hhcCHHHHhh--hhCCeEEe-----------Cccc--ccCCCCccHHHHHHHc
Confidence 3444567777777777777666543 5566666544 22211 12 2222 3334689999999999
Q ss_pred CCcEeccCCcc--chhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHH
Q 012412 372 GVPMVAMPQWS--DQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEI 416 (464)
Q Consensus 372 GvP~v~~P~~~--DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~l 416 (464)
|+....+-... +..+.+.-+.+. -+.+. +.+.++|.+.+.++
T Consensus 230 G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~~~dt~~~L~~r~~~~ 274 (302)
T 3o1l_A 230 GVKLIGATCHYVTEELDAGPIIEQD---VVRVSHRDSIENMVRFGRDV 274 (302)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHH
Confidence 99987765432 333322222222 22333 56778777766554
No 442
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=23.47 E-value=80 Score=30.91 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=33.9
Q ss_pred cEEEEEcCC---CccChHHHHHHHHHHHhCCCeEEEEeCccccc
Q 012412 14 AHCLVLTYP---GQGHINPLLQFSRRLQHKGIKVTLVTTRFFYK 54 (464)
Q Consensus 14 ~~il~~~~~---~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~ 54 (464)
+|.+|++.| +-|--.-.-.|+..|..||++|+..=-+.+..
T Consensus 3 ~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpyln 46 (535)
T 3nva_A 3 NKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYIN 46 (535)
T ss_dssp CEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSS
T ss_pred ceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCccee
Confidence 588998887 44677788999999999999999988766553
No 443
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=23.42 E-value=69 Score=28.88 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=23.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
++||+. |+.|.+- ..|++.|.++||+|+.+...
T Consensus 4 ~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 4 KRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 466654 3334443 46789999999999988754
No 444
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=23.37 E-value=1e+02 Score=30.51 Aligned_cols=25 Identities=12% Similarity=0.187 Sum_probs=20.5
Q ss_pred ceeccCCh------hHHHHHHHhCCcEeccC
Q 012412 355 CFVTHCGW------NSTMEALSLGVPMVAMP 379 (464)
Q Consensus 355 ~vI~HgG~------~s~~eal~~GvP~v~~P 379 (464)
.+++|.|- +.+.||-+.++|+|++-
T Consensus 68 v~~~TsGpG~~N~~~gia~A~~~~vPll~it 98 (568)
T 2wvg_A 68 AAVVTYSVGALSAFDAIGGAYAENLPVILIS 98 (568)
T ss_dssp EEEECTTTTHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHhhhCCCEEEEe
Confidence 37888886 47799999999999964
No 445
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=23.36 E-value=1.1e+02 Score=25.33 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=36.5
Q ss_pred CcEEE-EEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcccccc--cc----cCCCCCCceEEEccCC
Q 012412 13 LAHCL-VLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFFYKS--LH----RDSSSSSIPLEAISDG 73 (464)
Q Consensus 13 ~~~il-~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~~~~--~~----~~~~~~~~~~~~i~~~ 73 (464)
..||+ ++..+...+-.....+++.|++.|++|.+++-...... ++ +.....+-.+..+|.+
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~l~~la~~~n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CHHHHHHHHHCSTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHhccCCCceEEEEecCc
Confidence 33554 55555555677788899999999999988775432211 22 1122345666677644
No 446
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=23.36 E-value=1.1e+02 Score=28.23 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
++++||+.- +.|.+- ..|++.|.++||+|+.+....
T Consensus 28 ~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~~ 63 (379)
T 2c5a_A 28 ENLKISITG--AGGFIA--SHIARRLKHEGHYVIASDWKK 63 (379)
T ss_dssp SCCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred cCCeEEEEC--CccHHH--HHHHHHHHHCCCeEEEEECCC
Confidence 456776653 334443 467889999999999987643
No 447
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=23.21 E-value=62 Score=27.79 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCeEEEEeCcc
Q 012412 30 LLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 30 ~l~la~~L~~rGh~V~~~~~~~ 51 (464)
=.++|++|.++|++|+++..+.
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHCCCEEEEEECCc
Confidence 3678999999999999987654
No 448
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=23.18 E-value=77 Score=27.36 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccC--hHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGH--INPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH--~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.-++++..++.+| ...+..+|+.|+++|+.|..+-.+
T Consensus 56 ~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 56 DRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp SEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 3466666666666 346788999999999999877654
No 449
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=23.03 E-value=58 Score=28.85 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (464)
+|||.|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 47898886555553 46888989999998765
No 450
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=23.02 E-value=1.4e+02 Score=26.51 Aligned_cols=34 Identities=12% Similarity=0.098 Sum_probs=24.4
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQ-GHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~-GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++. .-+- .++|+.|+++|++|.++...
T Consensus 31 k~vlVTGasg~~GIG--~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 31 KKGVIIGVANDKSLA--WGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CEEEEECCCSTTSHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeCCCCCCHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5666666653 2332 47899999999999988764
No 451
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=23.01 E-value=89 Score=26.43 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=24.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++.| + =.++|+.|+++|++|.++...
T Consensus 3 k~vlITGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 3 KVAVITGASRG-I--GEAIARALARDGYALALGARS 35 (235)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56666666543 2 257899999999999888764
No 452
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=22.98 E-value=2e+02 Score=23.53 Aligned_cols=40 Identities=10% Similarity=0.000 Sum_probs=30.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 11 CKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
..++||+|+-..+.. ..-+....+.|.+.|++|++++...
T Consensus 21 ~~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 21 GLSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp TCCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred ccCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 345789988887654 3445567788888999999999864
No 453
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=22.95 E-value=4e+02 Score=23.66 Aligned_cols=121 Identities=8% Similarity=-0.040 Sum_probs=62.6
Q ss_pred ceEEEEe-cccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhh---------
Q 012412 279 SVVYVSY-GSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVL--------- 348 (464)
Q Consensus 279 ~~v~vs~-Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll--------- 348 (464)
.+.+|.. |.+. ...+.++.+.+..++.++..+... ..+.+ ....+.. |-...+++
T Consensus 5 rvgiIG~gG~i~-------~~h~~~l~~~~~~lvav~d~~~~~---~~~~~---~~~~~~~--~~~~~~ll~~~~~l~~~ 69 (312)
T 3o9z_A 5 RFALTGLAGYIA-------PRHLKAIKEVGGVLVASLDPATNV---GLVDS---FFPEAEF--FTEPEAFEAYLEDLRDR 69 (312)
T ss_dssp EEEEECTTSSSH-------HHHHHHHHHTTCEEEEEECSSCCC---GGGGG---TCTTCEE--ESCHHHHHHHHHHHHHT
T ss_pred EEEEECCChHHH-------HHHHHHHHhCCCEEEEEEcCCHHH---HHHHh---hCCCCce--eCCHHHHHHHhhhhccc
Confidence 3667777 4444 245566666677777766543221 11211 1123333 33345555
Q ss_pred -ccccccceeccCC----hhHHHHHHHhCCcEec-cCCccc--hh-hHHHHHHhHhcceeecc---CcCHHHHHHHHHHH
Q 012412 349 -AHEATGCFVTHCG----WNSTMEALSLGVPMVA-MPQWSD--QS-TNAKYILDVWKTGLKFP---IVKRDAIADCISEI 416 (464)
Q Consensus 349 -~~~~~~~vI~HgG----~~s~~eal~~GvP~v~-~P~~~D--Q~-~na~rl~~~~G~g~~l~---~~~~~~l~~~i~~l 416 (464)
+..|+ |+-.-- ..-+.+||.+|+++++ -|+..+ +. .-.+..++. |+-+.+. .+++ ....++++
T Consensus 70 ~~~vD~--V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~-g~~~~v~~~~R~~p--~~~~~k~~ 144 (312)
T 3o9z_A 70 GEGVDY--LSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELEART-GRRVYTVLQLRVHP--SLLALKER 144 (312)
T ss_dssp TCCCSE--EEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHH-CCCEEECCGGGGCH--HHHHHHHH
T ss_pred CCCCcE--EEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHc-CCEEEEEeehhcCH--HHHHHHHH
Confidence 34555 663322 3457899999999998 787653 22 233334455 5544443 3333 23344455
Q ss_pred hcC
Q 012412 417 LEG 419 (464)
Q Consensus 417 l~~ 419 (464)
+.+
T Consensus 145 i~~ 147 (312)
T 3o9z_A 145 LGQ 147 (312)
T ss_dssp HHT
T ss_pred HHc
Confidence 443
No 454
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.91 E-value=68 Score=28.44 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
++|++. |+.|.+-. .++++|.++||+|+.++...
T Consensus 3 ~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 3 NKILIL--GPTGAIGR--HIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCEEEE--STTSTTHH--HHHHHHHHHTCCEEEEECCS
T ss_pred cEEEEE--CCCchHHH--HHHHHHHhCCCcEEEEECCC
Confidence 466655 44455543 56888999999999988653
No 455
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=22.89 E-value=82 Score=28.15 Aligned_cols=103 Identities=10% Similarity=0.062 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcE-EEEeccChHHhhccccccceeccCChhHHHHHHHhCC
Q 012412 295 EMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKS-LVVSWCPQLEVLAHEATGCFVTHCGWNSTMEALSLGV 373 (464)
Q Consensus 295 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv-~~~~~~p~~~ll~~~~~~~vI~HgG~~s~~eal~~Gv 373 (464)
.-..+++.+++.+..+++..+.. ..+++++.+. .+..+ -+ |+++ .=...|.+.+..|+..|+
T Consensus 154 ~~~~~~~~l~~~~~Dlivlagy~--~il~~~~l~~--~~~~~iNi-----------HpSl--LP~~rG~~p~~~A~~~G~ 216 (288)
T 3obi_A 154 QEAAITALIAQTHTDLVVLARYM--QILSDEMSAR--LAGRCINI-----------HHSF--LPGFKGAKPYHQAFDRGV 216 (288)
T ss_dssp HHHHHHHHHHHHTCCEEEESSCC--SCCCHHHHHH--TTTSEEEE-----------EEEC--SSCCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCEEEhhhhh--hhCCHHHHhh--hcCCeEEe-----------Cccc--ccCCCCchHHHHHHHcCC
Confidence 33456677777777777666443 5666666554 22211 12 2222 334468999999999999
Q ss_pred cEeccCCcc--chhhHHHHHHhHhcceeecc-CcCHHHHHHHHHHHh
Q 012412 374 PMVAMPQWS--DQSTNAKYILDVWKTGLKFP-IVKRDAIADCISEIL 417 (464)
Q Consensus 374 P~v~~P~~~--DQ~~na~rl~~~~G~g~~l~-~~~~~~l~~~i~~ll 417 (464)
....+-... +..+.+.-+.+. -+.+. +.+.+.|.+.+.++-
T Consensus 217 ~~~G~Tvh~v~~~~D~GpIi~Q~---~v~i~~~dt~~~L~~r~~~~e 260 (288)
T 3obi_A 217 KLIGATAHYVTSALDEGPIIDQD---VERISHRDTPADLVRKGRDIE 260 (288)
T ss_dssp SEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHH
T ss_pred CEEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHHH
Confidence 987765432 333332222222 22333 567788777766543
No 456
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=22.82 E-value=4.4e+02 Score=24.04 Aligned_cols=89 Identities=18% Similarity=0.103 Sum_probs=51.3
Q ss_pred EEEEEcCCCc--cChHHHHHHHHHHHhCCCeEEEEeCccc-ccccccCCCCCCceEEEccCCCCCCCCCCccCHHHHHHH
Q 012412 15 HCLVLTYPGQ--GHINPLLQFSRRLQHKGIKVTLVTTRFF-YKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAYLER 91 (464)
Q Consensus 15 ~il~~~~~~~--GH~~p~l~la~~L~~rGh~V~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (464)
++++++.++. ....-+..+++.|.+.+.++.+++.+.. .+.+. ....++.+...- +
T Consensus 243 ~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~--~~~~~v~~~~~~----~--------------- 301 (412)
T 3otg_A 243 PLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLG--EVPANVRLESWV----P--------------- 301 (412)
T ss_dssp CEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCC--CCCTTEEEESCC----C---------------
T ss_pred CEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhc--cCCCcEEEeCCC----C---------------
Confidence 4566666655 3445677778888888999988887654 22222 011222222110 0
Q ss_pred HHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEE
Q 012412 92 FWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPF 140 (464)
Q Consensus 92 ~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (464)
+.+++.. .|++|+.... .+..=|-.+|+|+|.+
T Consensus 302 --------~~~~l~~-------ad~~v~~~g~-~t~~Ea~a~G~P~v~~ 334 (412)
T 3otg_A 302 --------QAALLPH-------VDLVVHHGGS-GTTLGALGAGVPQLSF 334 (412)
T ss_dssp --------HHHHGGG-------CSEEEESCCH-HHHHHHHHHTCCEEEC
T ss_pred --------HHHHHhc-------CcEEEECCch-HHHHHHHHhCCCEEec
Confidence 1222221 4999988654 2455678899999884
No 457
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=22.62 E-value=1e+02 Score=30.60 Aligned_cols=25 Identities=24% Similarity=0.414 Sum_probs=20.7
Q ss_pred ceeccCCh------hHHHHHHHhCCcEeccC
Q 012412 355 CFVTHCGW------NSTMEALSLGVPMVAMP 379 (464)
Q Consensus 355 ~vI~HgG~------~s~~eal~~GvP~v~~P 379 (464)
+++++.|- +.+.||-+.++|+|++-
T Consensus 90 v~~~tsGpG~~N~~~gi~~A~~~~vPlv~it 120 (570)
T 2vbf_A 90 AFLTTFGVGELSAINGLAGSYAENLPVVEIV 120 (570)
T ss_dssp EEEEETTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEcCCCCHHHHHHHHHHHhhhCCCEEEEe
Confidence 37888884 57799999999999975
No 458
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=22.56 E-value=55 Score=30.31 Aligned_cols=33 Identities=24% Similarity=0.181 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+|||.|+-.|..| .++|..|+++||+|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5789998777666 46889999999999999875
No 459
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=22.55 E-value=1e+02 Score=26.98 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=23.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|+++++.++.| + =.++|+.|+++|++|.++..
T Consensus 32 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 32 KTAFVTGGSRG-I--GAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56677766543 2 25789999999999998854
No 460
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=22.49 E-value=97 Score=26.90 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=23.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|+++++.++ |.+- .++|+.|+++|++|.++...
T Consensus 14 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 14 RVVLITGGG-SGLG--RATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 455565554 3332 46899999999999988754
No 461
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=22.39 E-value=3.8e+02 Score=24.39 Aligned_cols=121 Identities=13% Similarity=-0.010 Sum_probs=61.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhcccccccee
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 357 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI 357 (464)
.+.+|.+|.+.. ...+.++.+. +..++.++..+. +.+.++ . +.+. -|-...++|...++-+|+
T Consensus 7 rvgiiG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~-----~~~~~~--~-~~~~--~~~~~~~ll~~~~vD~V~ 70 (362)
T 3fhl_A 7 KTGLAAFGMSGQ------VFHAPFISTNPHFELYKIVERSK-----ELSKER--Y-PQAS--IVRSFKELTEDPEIDLIV 70 (362)
T ss_dssp EEEESCCSHHHH------HTTHHHHHHCTTEEEEEEECSSC-----CGGGTT--C-TTSE--EESCSHHHHTCTTCCEEE
T ss_pred EEEEECCCHHHH------HHHHHHHhhCCCeEEEEEEcCCH-----HHHHHh--C-CCCc--eECCHHHHhcCCCCCEEE
Confidence 356677776542 1134445444 456655554331 222221 1 1222 244567888873333366
Q ss_pred ccCC----hhHHHHHHHhCCcEec-cCCccc--hh-hHHHHHHhHhcceeecc---CcCHHHHHHHHHHHhc
Q 012412 358 THCG----WNSTMEALSLGVPMVA-MPQWSD--QS-TNAKYILDVWKTGLKFP---IVKRDAIADCISEILE 418 (464)
Q Consensus 358 ~HgG----~~s~~eal~~GvP~v~-~P~~~D--Q~-~na~rl~~~~G~g~~l~---~~~~~~l~~~i~~ll~ 418 (464)
-..- ...+.+|+.+|+++++ -|+..+ +. .-.+..++. |+-+.+. .+++ ..+.+++++.
T Consensus 71 i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~-g~~~~v~~~~R~~p--~~~~~k~~i~ 139 (362)
T 3fhl_A 71 VNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKK-GLMLSVYQNRRWDA--DFLTVRDILA 139 (362)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH-TCCEEEECGGGGSH--HHHHHHHHHH
T ss_pred EeCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHc-CCEEEEEecceeCH--HHHHHHHHHH
Confidence 4333 3457889999999998 787542 22 233344555 6555444 3443 2334445543
No 462
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=22.33 E-value=2.1e+02 Score=24.78 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCC-----------cEEEEeccC-------hHHhhc-cccc
Q 012412 293 AEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSH-----------KSLVVSWCP-------QLEVLA-HEAT 353 (464)
Q Consensus 293 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------nv~~~~~~p-------~~~ll~-~~~~ 353 (464)
...+..+.++|++.+ .++++.+..++......+.-. .|- +.+.++--| ...+|. .+|+
T Consensus 13 apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~--~pl~~~~~~~~~~~~~~~v~GTPaDCV~lal~~l~~~~PDL 89 (247)
T 1j9j_A 13 SKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIH--VPLWMKKVFISERVVAYSTTGTPADCVKLAYNVVMDKRVDL 89 (247)
T ss_dssp CHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCS--SCCCEEECCCSSSEEEEEESSCHHHHHHHHHHTTSTTCCSE
T ss_pred cHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCC--CCeEEEEeccCCCCceEEECCcHHHHHHHHHHhhccCCCCE
Confidence 366788889998877 666665544332222111100 111 122222223 224554 5676
Q ss_pred cceec---cCC-----------hhHHHHHHHhCCcEeccCCc
Q 012412 354 GCFVT---HCG-----------WNSTMEALSLGVPMVAMPQW 381 (464)
Q Consensus 354 ~~vI~---HgG-----------~~s~~eal~~GvP~v~~P~~ 381 (464)
||+ ||. .+-.+||..+|+|.|.+.+.
T Consensus 90 --VvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 129 (247)
T 1j9j_A 90 --IVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSA 129 (247)
T ss_dssp --EEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEES
T ss_pred --EEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecC
Confidence 662 322 45569999999999998763
No 463
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=22.21 E-value=47 Score=27.82 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=18.8
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHh---CCCeEE
Q 012412 10 SCKLAHCLVLTYPGQGHINPLLQFSRRLQH---KGIKVT 45 (464)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~---rGh~V~ 45 (464)
.+++|||+++..+.+.. .-...|++.+.+ .|++|.
T Consensus 3 ~M~~mkIl~I~GS~r~~-s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 3 TTSPLHFVTLLGSLRKA-SFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp --CCEEEEEEECCCSTT-CHHHHHHHHHHHHCCTTEEEE
T ss_pred CCCCCEEEEEEcCCCCC-ChHHHHHHHHHHHccCCCEEE
Confidence 45578999877665421 223344444443 466665
No 464
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=22.20 E-value=60 Score=30.39 Aligned_cols=37 Identities=16% Similarity=0.119 Sum_probs=26.2
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 9 TSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
...+.++|+|+-.|-.| +.+|..|+++|++|+++-..
T Consensus 19 ~~~~~~dV~IVGaG~aG-----l~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGG-----LSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp ----CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCC
Confidence 34456789988665444 77889999999999999653
No 465
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=22.18 E-value=73 Score=27.48 Aligned_cols=33 Identities=15% Similarity=0.044 Sum_probs=23.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
||+++++.++.| +- .++|+.|+++|++|.++..
T Consensus 1 Mk~vlVTGas~g-IG--~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-GG--MGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-TH--HHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-HH--HHHHHHHHHCCCEEEEEeC
Confidence 356667666543 32 4689999999999988754
No 466
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=22.17 E-value=44 Score=29.91 Aligned_cols=39 Identities=10% Similarity=-0.015 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCcc----ChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQG----HINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~G----H~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+|||+++..+... -+.-...++++|.++||+|..+...
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 36799988766432 1344668899999999999988774
No 467
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.17 E-value=84 Score=28.32 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=22.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
+++||+.- +.|-+- ..|++.|.++||+|+.+..
T Consensus 5 ~~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTG--GAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 35665543 334333 4688999999999998865
No 468
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=22.14 E-value=75 Score=28.83 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
++|||+|+-.+.. .....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeC
Confidence 4689999876542 345567777889999866654
No 469
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=22.10 E-value=1.3e+02 Score=24.82 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=31.6
Q ss_pred cEEEEEcCC-CccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYP-GQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~-~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+|.++..+ +.|-..-++.++..+..+|.+|.++.+.
T Consensus 8 g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 8 GWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 467766666 8899999999999999999999999743
No 470
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=22.06 E-value=97 Score=27.43 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=23.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (464)
|+++++.++.| + =.++|+.|+++|++|.++.
T Consensus 10 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAAKR-L--GRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCeEEEEc
Confidence 45667766543 3 3578999999999999987
No 471
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=22.04 E-value=65 Score=29.34 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.+||.|+-.|..| ..+|..|.+.||+|++....
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 5799998776666 47889999999999998764
No 472
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=21.99 E-value=72 Score=26.96 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
||+++++.++.| +- .++|+.|+++|++|.++...
T Consensus 1 Mk~vlVTGas~g-IG--~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG-LG--AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH-HH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 355666666532 32 57899999999999988764
No 473
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=21.91 E-value=1e+02 Score=28.37 Aligned_cols=33 Identities=9% Similarity=-0.103 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
.||+++..+ .-...+++++.+.||+|.++....
T Consensus 2 ~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 2 LTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 478888543 446788999999999999887643
No 474
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=21.86 E-value=95 Score=30.79 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=22.8
Q ss_pred cccccceeccCCh------hHHHHHHHhCCcEeccC
Q 012412 350 HEATGCFVTHCGW------NSTMEALSLGVPMVAMP 379 (464)
Q Consensus 350 ~~~~~~vI~HgG~------~s~~eal~~GvP~v~~P 379 (464)
+..+ +++|.|- +.+.||-+.++|+|++-
T Consensus 73 ~p~v--~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 73 KAGV--ALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp SCEE--EEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEE--EEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 4455 8889886 57799999999999964
No 475
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=21.84 E-value=1.3e+02 Score=28.61 Aligned_cols=35 Identities=11% Similarity=-0.104 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHh-CCCeEEEEeCc
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQH-KGIKVTLVTTR 50 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~-rGh~V~~~~~~ 50 (464)
.-|+.+++.++.|= =+++|+.|++ +|++|.++...
T Consensus 60 ~gKvaLVTGASsGI---G~AiA~~LA~~~GA~Vv~~~r~ 95 (422)
T 3s8m_A 60 GPKKVLVIGASSGY---GLASRITAAFGFGADTLGVFFE 95 (422)
T ss_dssp SCSEEEEESCSSHH---HHHHHHHHHHHHCCEEEEEECC
T ss_pred CCCEEEEECCChHH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 34677888777652 2688999999 99999887653
No 476
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=21.73 E-value=1.3e+02 Score=27.27 Aligned_cols=34 Identities=12% Similarity=0.025 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
++|||+|+-.+. ......++|.++||+|..+.+.
T Consensus 6 ~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 6 QSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp -CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred cCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 468999986653 3445668888899999877663
No 477
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=21.72 E-value=1.8e+02 Score=24.37 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=29.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCC-eEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGI-KVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh-~V~~~~~~ 50 (464)
+-|+|--..+.|--.-...|++.|..+|+ .|.+.-.|
T Consensus 4 ~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~~v~~~rep 41 (213)
T 4tmk_A 4 KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREP 41 (213)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCCcceeeeCC
Confidence 35667777788999999999999999998 77554443
No 478
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=21.68 E-value=3.9e+02 Score=23.50 Aligned_cols=149 Identities=9% Similarity=-0.015 Sum_probs=0.0
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhcc---------------------CCC
Q 012412 276 AKESVVYVSYGSFVELKAEEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETL---------------------TSH 334 (464)
Q Consensus 276 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~---------------------~~~ 334 (464)
.++.++.|..|..+ .+.+..|.+.|..++++-+....+ +.+.+..... ...
T Consensus 12 ~~k~VLVVGgG~va-------~rka~~Ll~~Ga~VtViap~~~~~-l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (274)
T 1kyq_A 12 KDKRILLIGGGEVG-------LTRLYKLMPTGCKLTLVSPDLHKS-IIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKN 83 (274)
T ss_dssp TTCEEEEEEESHHH-------HHHHHHHGGGTCEEEEEEEEECTT-HHHHHCGGGC-----------CEEECTTCCTTSC
T ss_pred CCCEEEEECCcHHH-------HHHHHHHHhCCCEEEEEcCCCCcc-hhHHHHHHHhccccccccchhhcccccccccccC
Q ss_pred cE-EEEeccChHHhhc------cccccceeccCChhHHHHHHHh--------CCcEeccCCccchhhHHH-----HHHhH
Q 012412 335 KS-LVVSWCPQLEVLA------HEATGCFVTHCGWNSTMEALSL--------GVPMVAMPQWSDQSTNAK-----YILDV 394 (464)
Q Consensus 335 nv-~~~~~~p~~~ll~------~~~~~~vI~HgG~~s~~eal~~--------GvP~v~~P~~~DQ~~na~-----rl~~~ 394 (464)
++ .+..---....|. .+++ ||..-|.....+.++. |+|+-++ |.+.++. .+.+.
T Consensus 84 ~i~~~i~~~~~~~dL~~l~~~~~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~g 157 (274)
T 1kyq_A 84 EIYEYIRSDFKDEYLDLENENDAWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEIG 157 (274)
T ss_dssp CCSEEECSSCCGGGGCCSSTTCCEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEET
T ss_pred CeeEEEcCCCCHHHHhhcccCCCeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEeC
Q ss_pred hc-ceeecc-----CcCHHHHHHHHHHHh---cCCchHHHHHHHHHHHHHHHHH
Q 012412 395 WK-TGLKFP-----IVKRDAIADCISEIL---EGERGKELRRNAGKWRKLAKEA 439 (464)
Q Consensus 395 ~G-~g~~l~-----~~~~~~l~~~i~~ll---~~~~~~~~~~~a~~l~~~~~~~ 439 (464)
+ +-+.+. ..=+..|++.|..+| .+++...+-+.+.++++.+++.
T Consensus 158 -~~l~IaIST~Gksp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~ 210 (274)
T 1kyq_A 158 -DRLQILISTNGLSPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLL 210 (274)
T ss_dssp -TTEEEEEEESSSCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhh
No 479
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=21.62 E-value=82 Score=31.56 Aligned_cols=80 Identities=13% Similarity=0.017 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCcccCcCChhhhhhccCCCcEEEEec--------cChH--HhhccccccceeccCCh-
Q 012412 294 EEMEELAWGLKSSDQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSW--------CPQL--EVLAHEATGCFVTHCGW- 362 (464)
Q Consensus 294 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~--------~p~~--~ll~~~~~~~vI~HgG~- 362 (464)
..-+.+++.|++.|.+.++.++++....+-+.+.+ .+.++.+.- .-.- .+-.++.+ +++|.|-
T Consensus 32 ~~a~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~----~~~i~~i~~~hE~~Aa~aA~GyAr~tgkpgv--~~~TsGpG 105 (604)
T 2x7j_A 32 HYIGSFIDEFALSGITDAVVCPGSRSTPLAVLCAA----HPDISVHVQIDERSAGFFALGLAKAKQRPVL--LICTSGTA 105 (604)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSTTHHHHHHHHH----CTTCEEEECSSHHHHHHHHHHHHHHHTSCEE--EEECSSHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcCcccHHHHHHHHh----CCCceEEEecChHHHHHHHHHHHHhhCCCEE--EEECChhH
Confidence 34455666666666666666665543333333321 122333321 1111 22234445 8999996
Q ss_pred -----hHHHHHHHhCCcEeccC
Q 012412 363 -----NSTMEALSLGVPMVAMP 379 (464)
Q Consensus 363 -----~s~~eal~~GvP~v~~P 379 (464)
+.+.||-+.++|+|++-
T Consensus 106 ~~N~~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 106 AANFYPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp HHTTHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHhhcCCCEEEEe
Confidence 57799999999999964
No 480
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=21.61 E-value=3.6e+02 Score=24.55 Aligned_cols=91 Identities=13% Similarity=0.045 Sum_probs=53.2
Q ss_pred CcEEEEEcCCCccCh----HHHHHHHHHHHhCCCeEEEEeCcccccccccCCCCCCceEEEccCCCCCCCCCCccCHHHH
Q 012412 13 LAHCLVLTYPGQGHI----NPLLQFSRRLQHKGIKVTLVTTRFFYKSLHRDSSSSSIPLEAISDGYDEGGYAQAESIEAY 88 (464)
Q Consensus 13 ~~~il~~~~~~~GH~----~p~l~la~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 88 (464)
...+++++.|+.+-. .-+..+++.|.+.+.+|.+.......+... ....++.+.. +.+
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~--~~~~~v~~~~----~~p------------ 297 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALLG--ELPANVRVVE----WIP------------ 297 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCC--CCCTTEEEEC----CCC------------
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccccc--cCCCCEEEEe----ecC------------
Confidence 345778888876433 346778899999999999888765433332 1122222211 100
Q ss_pred HHHHHHhCcHHHHHHHHHhcCCCCCccEEEeCCchhhHHHHHHHcCCccEEE
Q 012412 89 LERFWQIGPQTLTELVEKMNGSDSPVDCIVYDSILLWALDVAKKFGLLGAPF 140 (464)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~l~~~~~p~DlVI~D~~~~~~~~~A~~~giP~v~~ 140 (464)
..+++. + .|++|+..... +..-|-..|+|.|.+
T Consensus 298 -----------~~~lL~------~-~~~~v~h~G~~-s~~Eal~~GvP~v~~ 330 (400)
T 4amg_A 298 -----------LGALLE------T-CDAIIHHGGSG-TLLTALAAGVPQCVI 330 (400)
T ss_dssp -----------HHHHHT------T-CSEEEECCCHH-HHHHHHHHTCCEEEC
T ss_pred -----------HHHHhh------h-hhheeccCCcc-HHHHHHHhCCCEEEe
Confidence 122221 2 49999875543 455677789999874
No 481
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=21.57 E-value=72 Score=25.84 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=29.4
Q ss_pred cEEEEEcCCCc--c-ChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLVLTYPGQ--G-HINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~~~~~~~--G-H~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
-+|+++|.=|. . --.+...|++.|.++|.+|.|+-+|..
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 72 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVA 72 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 36777765433 1 234888999999999999999999743
No 482
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=21.50 E-value=42 Score=23.56 Aligned_cols=27 Identities=7% Similarity=0.056 Sum_probs=13.6
Q ss_pred HHHHHHHHhhCCCeEEEEEcCcccCcC
Q 012412 296 MEELAWGLKSSDQHFLWVVRESEQAKL 322 (464)
Q Consensus 296 ~~~~~~al~~~~~~~i~~~~~~~~~~~ 322 (464)
+..+++.....+.+.+.++++.....+
T Consensus 21 l~~fl~~a~~~g~~~v~IIHGkG~GvL 47 (83)
T 2zqe_A 21 VDQALEEARALGLSTLRLLHGKGTGAL 47 (83)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSTTSHH
T ss_pred HHHHHHHHHHCCCCEEEEEECCCchHH
Confidence 333444444456666666665544333
No 483
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=21.36 E-value=92 Score=25.50 Aligned_cols=36 Identities=8% Similarity=-0.044 Sum_probs=21.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHh---CCCeEEEEe
Q 012412 12 KLAHCLVLTYPGQGHINPLLQFSRRLQH---KGIKVTLVT 48 (464)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~la~~L~~---rGh~V~~~~ 48 (464)
.+|||+++..+.+.+ .-...+++.+++ .|++|.++-
T Consensus 5 ~~Mkilii~gS~r~~-g~t~~la~~i~~~l~~g~~v~~~d 43 (193)
T 1rtt_A 5 DDIKVLGISGSLRSG-SYNSAALQEAIGLVPPGMSIELAD 43 (193)
T ss_dssp --CEEEEEESCCSTT-CHHHHHHHHHHTTCCTTCEEEECC
T ss_pred CCceEEEEECCCCCC-ChHHHHHHHHHHhccCCCeEEEEe
Confidence 347999877776532 345666676654 367776553
No 484
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=21.36 E-value=71 Score=30.73 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=25.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
|+.+++.++.| +- ..+|+.|+++|++|.++....
T Consensus 214 k~~LVTGgsgG-IG--~aiA~~La~~Ga~Vvl~~r~~ 247 (454)
T 3u0b_A 214 KVAVVTGAARG-IG--ATIAEVFARDGATVVAIDVDG 247 (454)
T ss_dssp CEEEESSCSSH-HH--HHHHHHHHHTTCEEEEEECGG
T ss_pred CEEEEeCCchH-HH--HHHHHHHHHCCCEEEEEeCCc
Confidence 57777766643 33 578999999999998887543
No 485
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=21.35 E-value=1.3e+02 Score=23.06 Aligned_cols=33 Identities=12% Similarity=0.033 Sum_probs=21.1
Q ss_pred CcEEEEEcCCCccChH--------HHHHHHHHHHhCCCeEE
Q 012412 13 LAHCLVLTYPGQGHIN--------PLLQFSRRLQHKGIKVT 45 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~--------p~l~la~~L~~rGh~V~ 45 (464)
.||.+|++.|=+|... .+-..|..|.++||-+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 4566677777666632 34455667889999654
No 486
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=21.31 E-value=1.3e+02 Score=27.75 Aligned_cols=33 Identities=6% Similarity=-0.062 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
+||+++..+ .....++++|.+.|++|.++.+..
T Consensus 2 ~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 478888754 235678888999999999888743
No 487
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=21.14 E-value=69 Score=27.63 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=22.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
|.++++.++ |-+- .+++++|+++|++|+++..
T Consensus 8 k~vlITGas-ggiG--~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 8 KVVVITGSS-TGLG--KSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp CEEEETTCS-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-ChHH--HHHHHHHHHCCCEEEEEcC
Confidence 344555444 3332 5789999999999998876
No 488
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=21.12 E-value=1e+02 Score=26.76 Aligned_cols=37 Identities=14% Similarity=-0.006 Sum_probs=27.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCcc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRF 51 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~ 51 (464)
..+++-.|..|+..-...+++.|.++|++|..+-.+.
T Consensus 47 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 83 (315)
T 4f0j_A 47 RTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVG 83 (315)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCC
Confidence 3444445555666778899999999999998776643
No 489
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=21.10 E-value=94 Score=26.54 Aligned_cols=36 Identities=11% Similarity=0.034 Sum_probs=21.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEe
Q 012412 13 LAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~ 48 (464)
|++||++.-.--=-..-+-.+...+.++|++|++++
T Consensus 1 m~~vL~v~aHPDDe~l~~ggtia~~~~~G~~v~vv~ 36 (227)
T 1uan_A 1 MLDLLVVAPHPDDGELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp CEEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEeCCCcHHHhHHHHHHHHHhCCCcEEEEE
Confidence 457776554443334445555556678999876654
No 490
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=21.04 E-value=1.4e+02 Score=25.07 Aligned_cols=35 Identities=11% Similarity=0.140 Sum_probs=25.4
Q ss_pred EEEEEcCCCccC--hHHHHHHHHHHHhCCCeEEEEeC
Q 012412 15 HCLVLTYPGQGH--INPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 15 ~il~~~~~~~GH--~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
..+++-.|..|+ ..-...+++.|.++|++|..+--
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 344555555566 66778899999999999876544
No 491
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=21.03 E-value=5.8e+02 Score=24.81 Aligned_cols=32 Identities=9% Similarity=0.125 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
.|++++ |.-.-.++|++.|.+-|.+|..+...
T Consensus 365 KrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 365 KRFALW-----GDPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp CEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeC
Confidence 467766 34456778888888889988887654
No 492
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=20.98 E-value=1.2e+02 Score=23.36 Aligned_cols=35 Identities=11% Similarity=0.214 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccChHHH-HHHHHHHHhCCCeEEEEe
Q 012412 14 AHCLVLTYPGQGHINPL-LQFSRRLQHKGIKVTLVT 48 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~-l~la~~L~~rGh~V~~~~ 48 (464)
+||+++=.+.+|+...+ ..|++.|.++|++|..+.
T Consensus 2 ~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 46776666666887654 467888888999998764
No 493
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=20.97 E-value=2.6e+02 Score=23.03 Aligned_cols=38 Identities=29% Similarity=0.225 Sum_probs=28.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF 52 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~ 52 (464)
+||+|+-..+. ...-+....+.|.+.|++|++++....
T Consensus 3 ~kV~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~~ 40 (205)
T 2ab0_A 3 ASALVCLAPGS-EETEAVTTIDLLVRGGIKVTTASVASD 40 (205)
T ss_dssp CEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEECSST
T ss_pred cEEEEEEcCCC-cHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 48888777665 345566677889999999999998543
No 494
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=20.89 E-value=1.7e+02 Score=22.24 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=26.7
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 8 PTSCKLAHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+.+.++++||++-. +-.-...+.+.|...|++|..+...
T Consensus 2 s~~~~~~~iLivdd----~~~~~~~l~~~L~~~g~~v~~~~~~ 40 (154)
T 2rjn_A 2 SLNYKNYTVMLVDD----EQPILNSLKRLIKRLGCNIITFTSP 40 (154)
T ss_dssp --CCSCCEEEEECS----CHHHHHHHHHHHHTTTCEEEEESCH
T ss_pred CCCCCCCeEEEEcC----CHHHHHHHHHHHHHcCCeEEEeCCH
Confidence 34566789998854 4455667788888889998865543
No 495
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=20.87 E-value=1.2e+02 Score=26.21 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=22.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 15 HCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 15 ~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
|.++++.++ |-+- .++++.|+++||+|.++...
T Consensus 8 k~vlVTGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 8 KVALVSGGA-RGMG--ASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 345555544 3332 46899999999999988754
No 496
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.84 E-value=56 Score=29.44 Aligned_cols=38 Identities=18% Similarity=0.023 Sum_probs=28.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCccc-ccccc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTRFF-YKSLH 57 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~~~-~~~~~ 57 (464)
|||+|+-.|+.|- .+|..|. +||+|+++..... .+.+.
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~ 41 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQ 41 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHH
T ss_pred CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHH
Confidence 6999997766664 5678888 9999999987643 33444
No 497
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=20.83 E-value=95 Score=30.78 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=22.9
Q ss_pred cccccceeccCChh------HHHHHHHhCCcEeccC
Q 012412 350 HEATGCFVTHCGWN------STMEALSLGVPMVAMP 379 (464)
Q Consensus 350 ~~~~~~vI~HgG~~------s~~eal~~GvP~v~~P 379 (464)
+..+ +++|.|-| .+.||-+.++|+|++.
T Consensus 84 kp~v--~~~TsGpG~~N~~~gv~~A~~~~vPll~it 117 (565)
T 2nxw_A 84 TLGV--AAVTYGAGAFNMVNAVAGAYAEKSPVVVIS 117 (565)
T ss_dssp SCEE--EEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCeE--EEECCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 4555 89998865 7799999999999964
No 498
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=20.74 E-value=75 Score=28.12 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCeEEEEeCc
Q 012412 14 AHCLVLTYPGQGHINPLLQFSRRLQHKGIKVTLVTTR 50 (464)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~la~~L~~rGh~V~~~~~~ 50 (464)
+||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECSS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 578888666555 35788899999999988653
No 499
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=20.71 E-value=86 Score=27.69 Aligned_cols=32 Identities=9% Similarity=0.207 Sum_probs=24.2
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHHhCCCeEEEEeC
Q 012412 13 LAHCLVLTY-PGQGHINPLLQFSRRLQHKGIKVTLVTT 49 (464)
Q Consensus 13 ~~~il~~~~-~~~GH~~p~l~la~~L~~rGh~V~~~~~ 49 (464)
+|||.|+-. |..| ..+|+.|.++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 469998866 4444 4578889999999997754
No 500
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=20.71 E-value=1.8e+02 Score=26.73 Aligned_cols=125 Identities=14% Similarity=0.030 Sum_probs=65.5
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCeEEEEEcCcccCcCChhhhhhccCCCcEEEEeccChHHhhcccccccee
Q 012412 279 SVVYVSYGSFVELKAEEMEELAWGLKSS-DQHFLWVVRESEQAKLPKKFSDETLTSHKSLVVSWCPQLEVLAHEATGCFV 357 (464)
Q Consensus 279 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~vI 357 (464)
.+.+|.+|.+.. ..++.++.+. +..++.++..+.. -.+.+.++ . +... -+-...++|..+++-+|+
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~~--~~~~~a~~--~-~~~~--~~~~~~~ll~~~~vD~V~ 73 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSDLE--RARRVHRF--I-SDIP--VLDNVPAMLNQVPLDAVV 73 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSSHH--HHGGGGGT--S-CSCC--EESSHHHHHHHSCCSEEE
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCCHH--HHHHHHHh--c-CCCc--ccCCHHHHhcCCCCCEEE
Confidence 367777776541 1255666665 4566555543211 01122211 0 1111 134567888866333377
Q ss_pred ccCChh----HHHHHHHhCCcEec-cCCccc--h-hhHHHHHHhHhcceeecc---CcCHHHHHHHHHHHhcC
Q 012412 358 THCGWN----STMEALSLGVPMVA-MPQWSD--Q-STNAKYILDVWKTGLKFP---IVKRDAIADCISEILEG 419 (464)
Q Consensus 358 ~HgG~~----s~~eal~~GvP~v~-~P~~~D--Q-~~na~rl~~~~G~g~~l~---~~~~~~l~~~i~~ll~~ 419 (464)
-..-.. -+.+|+.+|+++++ -|+..+ + ..-.+..++. |+-+.+. .+.+ ..+.+++++.+
T Consensus 74 i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~-g~~~~v~~~~R~~p--~~~~~k~~i~~ 143 (359)
T 3m2t_A 74 MAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRS-DVVSGVGMNFKFAR--PVRQLREMTQV 143 (359)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHH-TCCEEECCHHHHCH--HHHHHHHHHTS
T ss_pred EcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHc-CCEEEEEecccCcH--HHHHHHHHHHC
Confidence 554433 46789999999988 787653 2 2234445556 6655554 3333 23444555543
Done!