Query 012416
Match_columns 464
No_of_seqs 323 out of 2533
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 09:01:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012416.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012416hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 99.9 5.8E-28 2E-32 220.9 12.5 140 165-310 5-145 (172)
2 3oi8_A Uncharacterized protein 99.9 4.4E-26 1.5E-30 204.9 14.0 139 166-310 2-141 (156)
3 3ocm_A Putative membrane prote 99.9 4.1E-26 1.4E-30 210.0 12.5 154 183-425 13-167 (173)
4 3lv9_A Putative transporter; C 99.9 4.2E-25 1.4E-29 195.8 12.2 124 185-310 2-126 (148)
5 3oco_A Hemolysin-like protein 99.9 6.9E-25 2.3E-29 196.0 7.4 148 189-424 3-152 (153)
6 3lfr_A Putative metal ION tran 99.9 1.5E-22 5.2E-27 177.5 11.2 104 205-310 2-108 (136)
7 3jtf_A Magnesium and cobalt ef 99.9 8.2E-22 2.8E-26 171.1 13.7 106 203-310 2-107 (129)
8 3k6e_A CBS domain protein; str 99.9 4.1E-22 1.4E-26 180.2 10.0 111 196-310 4-123 (156)
9 3hf7_A Uncharacterized CBS-dom 99.9 6E-22 2E-26 172.6 10.4 104 205-310 1-108 (130)
10 3kxr_A Magnesium transporter, 99.9 1.5E-20 5E-25 177.8 17.5 128 167-310 25-155 (205)
11 3i8n_A Uncharacterized protein 99.9 1.2E-21 4.2E-26 170.0 9.2 107 202-310 2-110 (130)
12 3nqr_A Magnesium and cobalt ef 99.8 6.6E-21 2.3E-25 164.7 11.9 104 205-310 2-107 (127)
13 4esy_A CBS domain containing m 99.8 1.9E-20 6.6E-25 170.1 11.5 113 192-310 6-144 (170)
14 2yvy_A MGTE, Mg2+ transporter 99.8 2.2E-19 7.6E-24 176.6 12.7 118 187-310 116-238 (278)
15 2zy9_A Mg2+ transporter MGTE; 99.8 6.4E-19 2.2E-23 186.6 14.7 135 166-310 110-258 (473)
16 3ctu_A CBS domain protein; str 99.8 7E-19 2.4E-23 156.7 9.7 110 197-310 6-123 (156)
17 4gqw_A CBS domain-containing p 99.8 3.1E-18 1.1E-22 150.4 12.2 105 204-310 3-124 (152)
18 2emq_A Hypothetical conserved 99.8 3.3E-18 1.1E-22 152.1 12.0 109 198-310 3-120 (157)
19 2oux_A Magnesium transporter; 99.8 6.9E-18 2.4E-22 167.1 15.3 117 188-310 119-240 (286)
20 3lqn_A CBS domain protein; csg 99.8 2E-18 6.7E-23 152.6 9.8 106 201-310 10-124 (150)
21 3kpb_A Uncharacterized protein 99.7 3.2E-18 1.1E-22 145.6 9.8 101 206-310 1-101 (122)
22 2yzi_A Hypothetical protein PH 99.7 2.4E-17 8.2E-22 143.4 13.5 105 201-310 2-110 (138)
23 3fhm_A Uncharacterized protein 99.7 5.8E-18 2E-22 152.8 9.8 110 199-310 17-132 (165)
24 2ef7_A Hypothetical protein ST 99.7 2.1E-17 7.2E-22 142.8 12.5 103 203-310 1-106 (133)
25 3sl7_A CBS domain-containing p 99.7 9.4E-18 3.2E-22 151.9 10.7 104 205-310 3-137 (180)
26 3k2v_A Putative D-arabinose 5- 99.7 6.7E-18 2.3E-22 149.6 9.1 103 206-310 28-134 (149)
27 3gby_A Uncharacterized protein 99.7 1.8E-17 6.1E-22 143.0 11.3 102 204-310 3-107 (128)
28 1yav_A Hypothetical protein BS 99.7 1.2E-17 4.1E-22 149.4 9.9 105 202-310 10-123 (159)
29 2rc3_A CBS domain; in SITU pro 99.7 2.6E-17 8.8E-22 142.9 11.2 101 207-310 7-113 (135)
30 2p9m_A Hypothetical protein MJ 99.7 3.3E-17 1.1E-21 142.3 11.2 104 203-310 5-117 (138)
31 4fry_A Putative signal-transdu 99.7 2.9E-17 9.8E-22 146.4 11.1 102 206-310 7-117 (157)
32 2rih_A Conserved protein with 99.7 4.2E-17 1.4E-21 142.7 11.6 101 205-310 4-109 (141)
33 3fv6_A YQZB protein; CBS domai 99.7 7.8E-17 2.7E-21 144.5 12.0 103 203-310 14-122 (159)
34 2qrd_G Protein C1556.08C; AMPK 99.7 4.5E-17 1.5E-21 162.2 11.3 123 188-311 3-149 (334)
35 1pbj_A Hypothetical protein; s 99.7 1E-16 3.6E-21 136.5 10.8 100 206-310 1-104 (125)
36 1pvm_A Conserved hypothetical 99.7 5.9E-17 2E-21 148.9 9.9 101 206-310 9-114 (184)
37 2j9l_A Chloride channel protei 99.7 9.4E-17 3.2E-21 146.2 10.4 105 204-310 9-147 (185)
38 2v8q_E 5'-AMP-activated protei 99.7 4.2E-17 1.4E-21 162.4 8.7 124 184-310 15-157 (330)
39 1o50_A CBS domain-containing p 99.7 1.7E-16 5.9E-21 141.7 11.6 103 202-310 12-134 (157)
40 1y5h_A Hypothetical protein RV 99.7 7.6E-17 2.6E-21 139.3 8.8 103 204-310 6-113 (133)
41 2nyc_A Nuclear protein SNF4; b 99.7 1.8E-16 6E-21 138.1 10.9 104 203-310 5-122 (144)
42 2o16_A Acetoin utilization pro 99.7 1.6E-16 5.4E-21 142.8 10.4 103 204-310 3-117 (160)
43 2pfi_A Chloride channel protei 99.7 2.1E-16 7.1E-21 140.9 10.6 110 198-310 5-129 (164)
44 3t4n_C Nuclear protein SNF4; C 99.7 1E-16 3.6E-21 158.9 7.7 126 185-311 8-154 (323)
45 2uv4_A 5'-AMP-activated protei 99.6 4.9E-16 1.7E-20 138.0 10.6 103 202-310 19-132 (152)
46 3ddj_A CBS domain-containing p 99.6 6.7E-16 2.3E-20 151.2 11.7 130 166-310 64-195 (296)
47 3kh5_A Protein MJ1225; AMPK, A 99.6 7.7E-16 2.6E-20 148.4 9.3 134 166-310 51-187 (280)
48 1vr9_A CBS domain protein/ACT 99.6 5.4E-15 1.8E-19 139.7 14.5 100 205-310 12-111 (213)
49 3org_A CMCLC; transporter, tra 99.6 4.9E-16 1.7E-20 169.9 6.4 105 204-310 451-607 (632)
50 3t4n_C Nuclear protein SNF4; C 99.6 5.5E-15 1.9E-19 146.5 12.7 104 203-310 184-301 (323)
51 1zfj_A Inosine monophosphate d 99.6 5E-15 1.7E-19 157.0 13.1 131 166-310 54-192 (491)
52 3ddj_A CBS domain-containing p 99.6 2.7E-15 9.2E-20 146.9 9.2 103 204-310 154-266 (296)
53 3usb_A Inosine-5'-monophosphat 99.6 7.3E-15 2.5E-19 156.9 12.6 132 165-310 76-215 (511)
54 3kh5_A Protein MJ1225; AMPK, A 99.6 1.5E-14 5.1E-19 139.4 13.1 101 207-310 4-123 (280)
55 4fxs_A Inosine-5'-monophosphat 99.6 8.3E-16 2.8E-20 163.7 4.3 132 165-310 52-190 (496)
56 3l2b_A Probable manganase-depe 99.6 5.6E-15 1.9E-19 141.6 9.3 102 205-310 6-225 (245)
57 2d4z_A Chloride channel protei 99.6 1.2E-14 4E-19 141.9 10.8 59 203-264 10-69 (250)
58 3pc3_A CG1753, isoform A; CBS, 99.5 1.2E-14 4.2E-19 155.5 9.7 103 203-310 381-488 (527)
59 2yzq_A Putative uncharacterize 99.5 1.5E-14 5.3E-19 139.9 9.3 99 206-310 1-99 (282)
60 2yzq_A Putative uncharacterize 99.5 4.4E-14 1.5E-18 136.7 11.5 103 204-310 124-260 (282)
61 1me8_A Inosine-5'-monophosphat 99.5 4.2E-15 1.4E-19 158.5 1.7 136 165-310 60-202 (503)
62 2qrd_G Protein C1556.08C; AMPK 99.5 1.6E-13 5.3E-18 136.6 12.5 103 204-310 180-296 (334)
63 4avf_A Inosine-5'-monophosphat 99.5 6.1E-15 2.1E-19 156.8 0.9 131 165-310 51-188 (490)
64 2cu0_A Inosine-5'-monophosphat 99.5 9.4E-15 3.2E-19 155.1 1.6 128 166-310 57-189 (486)
65 2v8q_E 5'-AMP-activated protei 99.4 5.5E-13 1.9E-17 132.6 13.0 103 205-310 189-304 (330)
66 1vrd_A Inosine-5'-monophosphat 99.3 4.3E-13 1.5E-17 142.3 1.8 108 193-310 87-196 (494)
67 4af0_A Inosine-5'-monophosphat 99.1 5.9E-12 2E-16 133.3 1.6 110 191-310 128-239 (556)
68 1jcn_A Inosine monophosphate d 99.1 2E-12 6.8E-17 138.0 -3.8 101 207-310 109-214 (514)
69 3ghd_A A cystathionine beta-sy 98.8 9.9E-09 3.4E-13 80.6 6.5 65 217-284 1-70 (70)
70 3fio_A A cystathionine beta-sy 98.6 9.9E-08 3.4E-12 73.0 6.5 64 218-284 2-70 (70)
71 1vr9_A CBS domain protein/ACT 98.5 4E-08 1.4E-12 92.4 4.7 103 205-312 71-174 (213)
72 3l2b_A Probable manganase-depe 98.3 4.4E-07 1.5E-11 86.4 4.7 60 204-266 183-242 (245)
73 4esy_A CBS domain containing m 98.3 7.3E-07 2.5E-11 80.1 5.4 41 270-310 17-57 (170)
74 4fry_A Putative signal-transdu 98.1 2.1E-06 7.2E-11 75.6 5.4 61 203-268 75-135 (157)
75 3fv6_A YQZB protein; CBS domai 98.1 3.1E-06 1E-10 75.1 6.0 63 203-267 78-143 (159)
76 3kpb_A Uncharacterized protein 98.1 3.8E-06 1.3E-10 70.4 5.8 60 204-267 60-119 (122)
77 3ghd_A A cystathionine beta-sy 98.1 7.1E-06 2.4E-10 64.1 6.8 30 281-310 2-31 (70)
78 3lv9_A Putative transporter; C 98.0 9.2E-06 3.1E-10 70.8 7.6 41 270-310 22-64 (148)
79 2rc3_A CBS domain; in SITU pro 98.0 6E-06 2E-10 70.7 6.0 60 203-267 71-130 (135)
80 3lfr_A Putative metal ION tran 98.0 4.2E-06 1.4E-10 72.3 4.9 59 204-267 68-126 (136)
81 3fio_A A cystathionine beta-sy 98.0 1E-05 3.6E-10 61.5 6.5 31 280-310 1-31 (70)
82 3k2v_A Putative D-arabinose 5- 98.0 1.1E-05 3.7E-10 70.6 7.4 40 271-310 28-69 (149)
83 3lhh_A CBS domain protein; str 98.0 1.3E-05 4.4E-10 72.2 7.6 59 204-267 105-163 (172)
84 1pvm_A Conserved hypothetical 98.0 1.1E-05 3.9E-10 73.2 7.2 62 203-268 72-133 (184)
85 1pbj_A Hypothetical protein; s 98.0 7.3E-06 2.5E-10 68.8 5.4 60 203-267 62-121 (125)
86 2yzi_A Hypothetical protein PH 98.0 1.3E-05 4.6E-10 68.6 7.1 40 271-310 7-46 (138)
87 4gqw_A CBS domain-containing p 98.0 4.1E-06 1.4E-10 72.5 3.8 61 203-267 82-142 (152)
88 2rih_A Conserved protein with 98.0 1.5E-05 5.1E-10 68.8 7.3 40 271-310 5-44 (141)
89 2o16_A Acetoin utilization pro 97.9 1.4E-05 4.7E-10 71.0 7.1 40 271-310 5-44 (160)
90 3gby_A Uncharacterized protein 97.9 1.2E-05 4.1E-10 68.4 6.4 41 270-310 4-44 (128)
91 3oco_A Hemolysin-like protein 97.9 1.1E-05 3.8E-10 70.9 6.2 59 204-267 84-142 (153)
92 3ctu_A CBS domain protein; str 97.9 1.4E-05 4.8E-10 70.2 6.8 40 271-310 15-56 (156)
93 2p9m_A Hypothetical protein MJ 97.9 1.7E-05 5.8E-10 67.8 7.0 40 271-310 8-47 (138)
94 2uv4_A 5'-AMP-activated protei 97.9 1.3E-05 4.5E-10 70.2 6.5 60 205-266 86-149 (152)
95 1o50_A CBS domain-containing p 97.9 7.8E-06 2.7E-10 72.1 4.8 60 203-267 93-152 (157)
96 3fhm_A Uncharacterized protein 97.9 1.3E-05 4.6E-10 71.3 6.3 62 202-268 89-150 (165)
97 2ef7_A Hypothetical protein ST 97.9 2.6E-05 9.1E-10 66.3 7.8 40 271-310 4-43 (133)
98 3jtf_A Magnesium and cobalt ef 97.9 1.1E-05 3.7E-10 69.0 5.3 58 204-266 67-124 (129)
99 3sl7_A CBS domain-containing p 97.9 8.7E-06 3E-10 72.7 4.7 62 202-267 94-155 (180)
100 3i8n_A Uncharacterized protein 97.9 1.5E-05 5.1E-10 68.0 5.8 58 204-266 70-127 (130)
101 3nqr_A Magnesium and cobalt ef 97.9 1.1E-05 3.7E-10 68.6 4.8 58 204-266 67-124 (127)
102 1y5h_A Hypothetical protein RV 97.9 9.9E-06 3.4E-10 69.0 4.4 59 204-267 72-130 (133)
103 3lqn_A CBS domain protein; csg 97.9 1.5E-05 5.3E-10 69.3 5.6 41 270-310 14-56 (150)
104 2d4z_A Chloride channel protei 97.8 2.6E-05 8.9E-10 75.7 7.7 41 270-310 12-52 (250)
105 3hf7_A Uncharacterized CBS-dom 97.8 1.3E-05 4.5E-10 68.7 5.0 57 205-266 69-125 (130)
106 3k6e_A CBS domain protein; str 97.8 2.5E-05 8.4E-10 69.7 6.8 39 272-310 16-56 (156)
107 1yav_A Hypothetical protein BS 97.8 2.5E-05 8.6E-10 68.8 6.2 40 271-310 14-55 (159)
108 2emq_A Hypothetical conserved 97.8 2.7E-05 9.4E-10 68.1 6.4 41 270-310 10-52 (157)
109 3oi8_A Uncharacterized protein 97.8 1.8E-05 6.3E-10 69.9 5.2 55 204-263 101-155 (156)
110 2nyc_A Nuclear protein SNF4; b 97.8 4.4E-05 1.5E-09 65.4 7.5 40 271-310 8-50 (144)
111 1me8_A Inosine-5'-monophosphat 97.8 1.1E-05 3.7E-10 85.8 4.2 100 204-307 159-260 (503)
112 3kxr_A Magnesium transporter, 97.8 1.5E-05 5E-10 74.7 4.5 62 203-268 113-174 (205)
113 3usb_A Inosine-5'-monophosphat 97.7 6.5E-05 2.2E-09 80.1 9.0 106 203-312 172-279 (511)
114 2pfi_A Chloride channel protei 97.7 5.7E-05 2E-09 66.3 6.7 41 270-310 12-52 (164)
115 3ocm_A Putative membrane prote 97.7 6.9E-05 2.4E-09 67.9 7.3 41 270-310 35-77 (173)
116 2j9l_A Chloride channel protei 97.6 7.1E-05 2.4E-09 67.2 6.1 41 270-310 10-58 (185)
117 2yvy_A MGTE, Mg2+ transporter 97.5 5.3E-05 1.8E-09 73.8 4.6 62 203-268 196-257 (278)
118 3pc3_A CG1753, isoform A; CBS, 97.4 0.00014 4.9E-09 77.4 6.7 40 270-309 383-423 (527)
119 2oux_A Magnesium transporter; 97.4 8.3E-05 2.8E-09 73.0 4.1 61 203-267 198-258 (286)
120 3org_A CMCLC; transporter, tra 97.3 0.00017 5.7E-09 78.8 6.0 57 207-268 569-625 (632)
121 4avf_A Inosine-5'-monophosphat 97.3 0.00013 4.4E-09 77.4 4.6 101 204-307 145-247 (490)
122 2zy9_A Mg2+ transporter MGTE; 97.2 0.00024 8.3E-09 74.8 4.9 61 203-267 216-276 (473)
123 4fxs_A Inosine-5'-monophosphat 97.2 0.00015 5.3E-09 76.9 3.3 61 204-266 147-207 (496)
124 1vrd_A Inosine-5'-monophosphat 97.1 0.00024 8.1E-09 75.1 4.4 101 204-307 153-255 (494)
125 1jcn_A Inosine monophosphate d 96.9 0.00048 1.6E-08 73.2 4.3 100 204-307 171-273 (514)
126 1zfj_A Inosine monophosphate d 96.8 0.0039 1.3E-07 65.6 9.6 100 204-307 150-251 (491)
127 4af0_A Inosine-5'-monophosphat 96.7 0.00061 2.1E-08 72.5 3.1 59 204-266 198-256 (556)
128 2cu0_A Inosine-5'-monophosphat 96.7 0.00099 3.4E-08 70.3 4.8 99 204-310 148-248 (486)
129 2jaf_A Halorhodopsin, HR; chro 34.9 2.2E+02 0.0076 27.3 10.3 39 111-151 178-216 (274)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=5.8e-28 Score=220.89 Aligned_cols=140 Identities=24% Similarity=0.438 Sum_probs=94.4
Q ss_pred ccCCHHHHHHHHhhcccccccCCCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEee
Q 012416 165 VLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVP 244 (464)
Q Consensus 165 ~~~s~eEL~~lve~~~~e~~~~G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~P 244 (464)
..+|++||+.+++ ++.+.|.++++|++++++++++.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 5679999999998 45678999999999999999999999999999988999999999998 999999999999999
Q ss_pred EEecCCCcEEEEEEcchhccccccc-ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 245 VYSGNPTNIIGLILVKNLLSVDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 245 Vvd~d~d~iVGIVt~kDLl~~~~~~-~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
|++++.++++|+|+.+|++...... ..++.++| ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 145 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE 145 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 9986547999999999999875433 56899998 99999999999999999999999999999998
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.93 E-value=4.4e-26 Score=204.94 Aligned_cols=139 Identities=20% Similarity=0.366 Sum_probs=127.2
Q ss_pred cCCHHHHHHHHhhcccccccCCCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeE
Q 012416 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (464)
Q Consensus 166 ~~s~eEL~~lve~~~~e~~~~G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PV 245 (464)
.+|++||+.+++ +++++|.++++|++++++++++.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLR----QAHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHH----HHHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHH----hHHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 378999999998 45678999999999999999999999999999988999999999998 9999999999999999
Q ss_pred EecCCCcEEEEEEcchhcccccc-cccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 246 YSGNPTNIIGLILVKNLLSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 246 vd~d~d~iVGIVt~kDLl~~~~~-~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++.++++|+|+.+|++..... ...++.++| ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 141 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVIDE 141 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEECT
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEECC
Confidence 98764599999999999987544 356899996 66899999999999999999999999999998
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.93 E-value=4.1e-26 Score=210.00 Aligned_cols=154 Identities=19% Similarity=0.295 Sum_probs=136.2
Q ss_pred cccCCCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchh
Q 012416 183 AGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL 262 (464)
Q Consensus 183 ~~~~G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDL 262 (464)
++++|.++++|+++++++++|.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 4467999999999999999999999999999988999999999998 999999999999999998655799999999999
Q ss_pred cccccc-cccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEecCCccccccccccCCCCCCCCCCcCccccccc
Q 012416 263 LSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQKVDNG 341 (464)
Q Consensus 263 l~~~~~-~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDeyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (464)
+..... ...++. |++++++|++++++.++++.|.+++.+.+||+|+
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde------------------------------- 138 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADE------------------------------- 138 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT-------------------------------
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-------------------------------
Confidence 976532 245677 5789999999999999999999999999999998
Q ss_pred ccccccccccccccccccccCCCCCCCCCcccccCCCCcccccCCCCCCCCCCCCCceEEEEeHHHHHHHHHhccccccc
Q 012416 342 VTAAGQNLRNKLESKDAQQTKKVPPATPTFNKRHRGCSYCILDFENGPFPDFPSNDEAVGVITMEDVIEELLQEEILDET 421 (464)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vt~~d~~~~~~~~~~~~~~ 421 (464)
+|+++||||++|+++.+. +++.||.
T Consensus 139 ------------------------------------------------------~g~lvGiIT~~Dil~~l~-~~i~de~ 163 (173)
T 3ocm_A 139 ------------------------------------------------------FGAIEGLVTPIDVFEAIA-GEFPDED 163 (173)
T ss_dssp ------------------------------------------------------TCCEEEEECHHHHHHHHH-CCCCCTT
T ss_pred ------------------------------------------------------CCCEEEEEeHHHHHHHHh-CcCCCcc
Confidence 479999999999999999 7999998
Q ss_pred hhhH
Q 012416 422 DEYV 425 (464)
Q Consensus 422 ~~~~ 425 (464)
|++.
T Consensus 164 ~~~~ 167 (173)
T 3ocm_A 164 ELPD 167 (173)
T ss_dssp SCC-
T ss_pred ccHh
Confidence 8643
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.92 E-value=4.2e-25 Score=195.81 Aligned_cols=124 Identities=20% Similarity=0.413 Sum_probs=100.3
Q ss_pred cCCCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcc
Q 012416 185 KGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS 264 (464)
Q Consensus 185 ~~G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~ 264 (464)
++|.++++|++++++++++.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.|+++|+|+.+|++.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 45899999999999999999999999999988999999999998 99999999999999999865479999999999987
Q ss_pred ccccc-ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 265 VDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 265 ~~~~~-~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..... ..++.++| ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 126 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE 126 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC
Confidence 65433 57899998 99999999999999999999999999999998
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.91 E-value=6.9e-25 Score=196.01 Aligned_cols=148 Identities=26% Similarity=0.417 Sum_probs=123.8
Q ss_pred CChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEE-ecCCCcEEEEEEcchhccccc
Q 012416 189 LTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVY-SGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 189 L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVv-d~d~d~iVGIVt~kDLl~~~~ 267 (464)
++++|++++++++.+.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||+ +++.++++|+|+.+|++....
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6788999999999999999999999988999999999998 99999999999999999 543479999999999987643
Q ss_pred cc-ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEecCCccccccccccCCCCCCCCCCcCcccccccccccc
Q 012416 268 RD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQKVDNGVTAAG 346 (464)
Q Consensus 268 ~~-~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDeyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (464)
.. ..+++++| ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~------------------------------------ 124 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE------------------------------------ 124 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT------------------------------------
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC------------------------------------
Confidence 32 56899998 99999999999999999999999999999998
Q ss_pred cccccccccccccccCCCCCCCCCcccccCCCCcccccCCCCCCCCCCCCCceEEEEeHHHHHHHHHhccccccchhh
Q 012416 347 QNLRNKLESKDAQQTKKVPPATPTFNKRHRGCSYCILDFENGPFPDFPSNDEAVGVITMEDVIEELLQEEILDETDEY 424 (464)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vt~~d~~~~~~~~~~~~~~~~~ 424 (464)
+|+++||||..|+++.+. +++.||.|..
T Consensus 125 -------------------------------------------------~g~~vGivt~~dil~~l~-~~~~de~~~~ 152 (153)
T 3oco_A 125 -------------------------------------------------YGGTSGIITDKDVYEELF-GNLRDEQDDE 152 (153)
T ss_dssp -------------------------------------------------TSCEEEEECHHHHHHHHH-C---------
T ss_pred -------------------------------------------------CCCEEEEeeHHHHHHHHh-ccCCCcccCC
Confidence 489999999999999999 7999998753
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.88 E-value=1.5e-22 Score=177.50 Aligned_cols=104 Identities=30% Similarity=0.509 Sum_probs=93.6
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc---ccccccccccccCC
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---RDAVPLRKMIIRRI 281 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~---~~~~~V~dIM~r~~ 281 (464)
+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|+++... ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 678999999988999999999998 99999999999999999865479999999999997654 2356899996 568
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 282 ~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 108 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDE 108 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECT
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 99999999999999999999999999998
No 7
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.87 E-value=8.2e-22 Score=171.08 Aligned_cols=106 Identities=34% Similarity=0.539 Sum_probs=95.8
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 282 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~ 282 (464)
..+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|+++.......+++++| +++.
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988999999999998 999999999999999998644799999999999987655567899996 6788
Q ss_pred EecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 283 RVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 283 ~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd~ 107 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVIDE 107 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEECC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 9999999999999999999999999998
No 8
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.86 E-value=4.1e-22 Score=180.25 Aligned_cols=111 Identities=16% Similarity=0.240 Sum_probs=95.7
Q ss_pred HHHHhh-cccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc------
Q 012416 196 IIAGAL-ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR------ 268 (464)
Q Consensus 196 ~I~~vl-~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~------ 268 (464)
|+.+.+ +|-..+++++|+|+.+++++++++|+. +|++.|.+++++++||+|++ ++++|+|+.+|++++...
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccc
Confidence 444444 355668999999999999999999998 99999999999999999865 899999999999865322
Q ss_pred --cccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 269 --DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 269 --~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
...++.++|.+++.++++++++.++++.|.+++ ++||+|+
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~ 123 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA 123 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECT
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEec
Confidence 246899999999999999999999999999775 5999998
No 9
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.86 E-value=6e-22 Score=172.59 Aligned_cols=104 Identities=17% Similarity=0.322 Sum_probs=93.6
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccc----ccccccccccC
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD----AVPLRKMIIRR 280 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~----~~~V~dIM~r~ 280 (464)
+++|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|+++....+ ..++.++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988999999999998 9999999999999999976448999999999998775443 24688986 88
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 281 ~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++++++++.++++.|.+++.+.+||+|+
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 108 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVDE 108 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEECT
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEcC
Confidence 999999999999999999999999999998
No 10
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.85 E-value=1.5e-20 Score=177.77 Aligned_cols=128 Identities=9% Similarity=0.095 Sum_probs=114.8
Q ss_pred CCHHHHHHHHhhcccccccCCCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHc---CCcEe
Q 012416 167 LRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM---GHSRV 243 (464)
Q Consensus 167 ~s~eEL~~lve~~~~e~~~~G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~---~~Sr~ 243 (464)
+++++.+.++. .++++|++++++++.+++.+|+++|+| +++++++++|+. ++++.|.++ +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 45566666664 378999999999999999999999997 789999999998 999999987 78999
Q ss_pred eEEecCCCcEEEEEEcchhcccccccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 244 PVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 244 PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
||++++ ++++|+|+.+|++.... ..+++++|.+++.+|++++++.++++.|++++.+.+||+|+
T Consensus 92 ~Vvd~~-~~lvGivt~~dll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~ 155 (205)
T 3kxr_A 92 FIVDEA-DKYLGTVRRYDIFKHEP--HEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDD 155 (205)
T ss_dssp EEECTT-CBEEEEEEHHHHTTSCT--TSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECT
T ss_pred EEEcCC-CeEEEEEEHHHHHhCCC--cchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcC
Confidence 999865 89999999999987643 45899999889999999999999999999999999999998
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.85 E-value=1.2e-21 Score=169.96 Aligned_cols=107 Identities=22% Similarity=0.336 Sum_probs=93.2
Q ss_pred cccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccc--cccccccccc
Q 012416 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD--AVPLRKMIIR 279 (464)
Q Consensus 202 ~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~--~~~V~dIM~r 279 (464)
+|.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++...... ..+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 467899999999988999999999998 9999999999999999986547999999999998765432 46899997 7
Q ss_pred CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 280 ~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++.++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 110 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDE 110 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECT
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC
Confidence 7899999999999999999999999999998
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.84 E-value=6.6e-21 Score=164.66 Aligned_cols=104 Identities=30% Similarity=0.513 Sum_probs=93.1
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc--cccccccccccCCc
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--DAVPLRKMIIRRIP 282 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~--~~~~V~dIM~r~~~ 282 (464)
+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++.|+++|+|+.+|+++.... ...+++++| +++.
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~~ 79 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTAV 79 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCCe
Confidence 678999999987899999999998 999999999999999998654799999999999976432 356899996 6688
Q ss_pred EecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 283 RVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 283 ~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 107 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVIDE 107 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEECT
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEeC
Confidence 9999999999999999999999999998
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.83 E-value=1.9e-20 Score=170.13 Aligned_cols=113 Identities=16% Similarity=0.252 Sum_probs=97.8
Q ss_pred hHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc---
Q 012416 192 DETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--- 268 (464)
Q Consensus 192 ~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~--- 268 (464)
.++..+.+. +.+++|+|+|++ +++++++++|+. ++++.|.+++++++||+|++ |+++|+|+.+|+++....
T Consensus 6 ~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~ 79 (170)
T 4esy_A 6 ARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI 79 (170)
T ss_dssp HHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH
T ss_pred HHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc
Confidence 344455544 468999999985 789999999999 99999999999999999876 899999999999865321
Q ss_pred -----------------------cccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 269 -----------------------DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 269 -----------------------~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
...++.++|.+++.+|++++++.++++.|.+++.+.+||+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~ 144 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD 144 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET
T ss_pred cchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC
Confidence 135788999999999999999999999999999999999987
No 14
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.80 E-value=2.2e-19 Score=176.61 Aligned_cols=118 Identities=13% Similarity=0.150 Sum_probs=108.3
Q ss_pred CCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHc-----CCcEeeEEecCCCcEEEEEEcch
Q 012416 187 GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKN 261 (464)
Q Consensus 187 G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~-----~~Sr~PVvd~d~d~iVGIVt~kD 261 (464)
|.++..++..+.+++.+.+.+|+++|+| +++++++++|+. ++++.|.++ +++++||++++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 3578899999999999999999999997 788999999998 999999987 78999999875 89999999999
Q ss_pred hcccccccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 262 LLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 262 Ll~~~~~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++.... ..++.++|.+++++|++++++.++++.|++++.+.+||+|+
T Consensus 192 ll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 238 (278)
T 2yvy_A 192 LIVADP--RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 238 (278)
T ss_dssp HHHSCT--TCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HhcCCC--CCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC
Confidence 986533 45899998899999999999999999999999999999998
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.79 E-value=6.4e-19 Score=186.61 Aligned_cols=135 Identities=13% Similarity=0.142 Sum_probs=119.2
Q ss_pred cCCHHHHHHHHhhcccccccC---------CCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHH
Q 012416 166 LLRRAELKTFVNFHGNEAGKG---------GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM 236 (464)
Q Consensus 166 ~~s~eEL~~lve~~~~e~~~~---------G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~ 236 (464)
.++++|+..+++. ..++ +.+++++++++++++++++.+|+++|+| +++++++++|+. ++++.++
T Consensus 110 ~l~~dd~~~ll~~----l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQA----VRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHH----HHHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHh----CCHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 3567777777763 2334 6899999999999999999999999996 899999999998 9999999
Q ss_pred Hc-----CCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 237 TM-----GHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 237 ~~-----~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++ +++++||+|++ ++++|+|+.+|++.... +.+++++|.+++.+|++++++.++++.|++++.+.+||+|+
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~~--~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe 258 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVADP--RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDE 258 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSCT--TSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCCC--CCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC
Confidence 86 47999999876 89999999999987533 45899999899999999999999999999999999999998
No 16
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.77 E-value=7e-19 Score=156.73 Aligned_cols=110 Identities=15% Similarity=0.193 Sum_probs=96.5
Q ss_pred HHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccc-------
Q 012416 197 IAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD------- 269 (464)
Q Consensus 197 I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~------- 269 (464)
-.....+...+|+++|+|+.+++++++++|+. ++++.|.+++++++||+|++ |+++|+|+.+|++......
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~ 83 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIM 83 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHH
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhcccccccc
Confidence 34555677889999999988999999999998 99999999999999999865 8999999999998764321
Q ss_pred -ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 -AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 -~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..++.++|.++++++++++++.++++.|.+++ .+||+|+
T Consensus 84 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~ 123 (156)
T 3ctu_A 84 ADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA 123 (156)
T ss_dssp TTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT
T ss_pred ccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC
Confidence 46899999899999999999999999999886 6999997
No 17
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.76 E-value=3.1e-18 Score=150.39 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=93.6
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc----------------
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---------------- 267 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~---------------- 267 (464)
...+|+++|+|+.+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4578999999877899999999998 99999999999999999875 89999999999986421
Q ss_pred -ccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 268 -RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 268 -~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
....++.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~ 124 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS 124 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECT
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 1246899999888999999999999999999999999999997
No 18
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.76 E-value=3.3e-18 Score=152.09 Aligned_cols=109 Identities=20% Similarity=0.262 Sum_probs=92.0
Q ss_pred HHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc---------
Q 012416 198 AGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--------- 268 (464)
Q Consensus 198 ~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~--------- 268 (464)
.+...+.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++ |+++|+|+.+|++.....
T Consensus 3 ~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 3 WEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp -------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred hhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHHh
Confidence 4556678899999999867888999999998 99999999999999999865 899999999999875432
Q ss_pred cccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 269 DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 269 ~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
...++.++|.++++++++++++.++++.|.+++. +||+|+
T Consensus 81 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~ 120 (157)
T 2emq_A 81 ETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND 120 (157)
T ss_dssp GTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS
T ss_pred cCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC
Confidence 2468999998999999999999999999999976 999997
No 19
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.76 E-value=6.9e-18 Score=167.10 Aligned_cols=117 Identities=17% Similarity=0.171 Sum_probs=107.7
Q ss_pred CCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHc-----CCcEeeEEecCCCcEEEEEEcchh
Q 012416 188 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKNL 262 (464)
Q Consensus 188 ~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~-----~~Sr~PVvd~d~d~iVGIVt~kDL 262 (464)
.++.+++..+++++.+.+.+|+++|++ +++++++++|+. ++++.|.++ +++++||++++ ++++|+|+.+|+
T Consensus 119 ~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dl 194 (286)
T 2oux_A 119 LLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDL 194 (286)
T ss_dssp TSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHH
T ss_pred cCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHH
Confidence 478889999999999999999999986 788999999998 999999987 88999999875 899999999999
Q ss_pred cccccccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 263 LSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 263 l~~~~~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+.... ..++.++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 195 l~~~~--~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~ 240 (286)
T 2oux_A 195 IVNDD--DTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDY 240 (286)
T ss_dssp TTSCT--TSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HcCCC--CCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 87643 45899999899999999999999999999999999999998
No 20
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.75 E-value=2e-18 Score=152.60 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=94.2
Q ss_pred hcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc---------ccc
Q 012416 201 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAV 271 (464)
Q Consensus 201 l~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~---------~~~ 271 (464)
..|.+.+|+++|+|+.+++++++++|+. ++++.|.+++++++||+|++ |+++|+|+.+|++..... ...
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 3467889999999877889999999998 99999999999999999875 899999999999865421 246
Q ss_pred ccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 272 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 272 ~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++.++|.++++++++++++.++++.|.+++. +||+|+
T Consensus 88 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~ 124 (150)
T 3lqn_A 88 KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNE 124 (150)
T ss_dssp BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECT
T ss_pred CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECC
Confidence 8999998899999999999999999999986 999997
No 21
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.75 E-value=3.2e-18 Score=145.59 Aligned_cols=101 Identities=12% Similarity=0.246 Sum_probs=92.3
Q ss_pred cccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCcEec
Q 012416 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 285 (464)
Q Consensus 206 itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~~V~ 285 (464)
.+|+++|++ ++.++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++........++.++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 368999996 678899999998 99999999999999999865 89999999999998765555689999989999999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 286 EDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 286 e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+++++.++++.|.+++.+.+||+|+
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd~ 101 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVDD 101 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCCHHHHHHHHHHhCCCeEEEECC
Confidence 9999999999999999999999998
No 22
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.73 E-value=2.4e-17 Score=143.36 Aligned_cols=105 Identities=13% Similarity=0.275 Sum_probs=92.5
Q ss_pred hcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcc-cccc---cccccccc
Q 012416 201 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDYR---DAVPLRKM 276 (464)
Q Consensus 201 l~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~-~~~~---~~~~V~dI 276 (464)
+.|.+.+|+++|++ +++++++++|+. ++++.|.+++++.+||++++ |+++|+|+.+|+++ .... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 778899999998 99999999999999999865 89999999999973 3221 24689999
Q ss_pred cccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 277 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 277 M~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
|.++++++++++++.++++.|.+++.+.+ |+|+
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~ 110 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE 110 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC
Confidence 88999999999999999999999999999 9997
No 23
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=5.8e-18 Score=152.76 Aligned_cols=110 Identities=9% Similarity=0.124 Sum_probs=97.6
Q ss_pred HhhcccccccccccccC-cceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc-----cccc
Q 012416 199 GALELTEKTAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVP 272 (464)
Q Consensus 199 ~vl~l~~itV~dIMtPR-~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~-----~~~~ 272 (464)
....+...+|+++|+|+ .+++++++++|+. ++++.|.+++++.+||+|++ |+++|+|+.+|+++.... ...+
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 94 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQS 94 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTSB
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccCC
Confidence 44567789999999984 5688999999998 99999999999999999865 899999999999875322 2468
Q ss_pred cccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 273 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 273 V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 95 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 132 (165)
T 3fhm_A 95 VSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN 132 (165)
T ss_dssp GGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 99999899999999999999999999999999999997
No 24
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.73 E-value=2.1e-17 Score=142.83 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=92.3
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc---ccccccccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---DAVPLRKMIIR 279 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~---~~~~V~dIM~r 279 (464)
|.+.+|+++|++ +++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++..... ...++.++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999987 578899999998 999999999999999998 4 899999999999865432 24689999888
Q ss_pred CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 280 ~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++.++++++++.++++.|.+++.+.+||+|+
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 106 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVDD 106 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEECC
Confidence 9999999999999999999999999999997
No 25
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.73 E-value=9.4e-18 Score=151.95 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=92.9
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc------------------
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD------------------ 266 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~------------------ 266 (464)
..+|+++|+|+.+++++++++|+. ++++.|.+++++++||++++ ++++|+|+.+|+++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999877899999999998 99999999999999999875 8999999999998531
Q ss_pred -------------cccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 267 -------------YRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 267 -------------~~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.....++.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 137 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA 137 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECT
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 11245799999888999999999999999999999999999997
No 26
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.73 E-value=6.7e-18 Score=149.64 Aligned_cols=103 Identities=22% Similarity=0.212 Sum_probs=93.9
Q ss_pred cccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc----cccccccccccCC
Q 012416 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 281 (464)
Q Consensus 206 itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~----~~~~V~dIM~r~~ 281 (464)
.+|+++|+|+.+++++++++|+. ++++.|.+++++.+||++++ |+++|+|+.+|+++.... ...++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999877889999999998 99999999999999999865 899999999999876433 2468999998999
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 282 ~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.++++++++.++++.|.+++.+.+||+|+
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADG 134 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecC
Confidence 99999999999999999999999999998
No 27
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=1.8e-17 Score=142.98 Aligned_cols=102 Identities=14% Similarity=0.181 Sum_probs=92.4
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccc---ccccccccccC
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---AVPLRKMIIRR 280 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~---~~~V~dIM~r~ 280 (464)
.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||+++ |+++|+|+.+|+++...+. ..++.++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 56899999986 577899999998 9999999999999999986 8999999999999875443 25699999899
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 281 ~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++++++++.++++.|.+++.+.+||+|+
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~ 107 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLADE 107 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEECC
Confidence 999999999999999999999999999997
No 28
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.72 E-value=1.2e-17 Score=149.36 Aligned_cols=105 Identities=19% Similarity=0.308 Sum_probs=92.9
Q ss_pred cccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc---------cccc
Q 012416 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAVP 272 (464)
Q Consensus 202 ~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~---------~~~~ 272 (464)
.+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|++..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 567899999999877888999999998 99999999999999999875 799999999999875422 2468
Q ss_pred cccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 273 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 273 V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+.++|.+++.++++++++.++++.|.+++. +||+|+
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~ 123 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND 123 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC
Confidence 999988899999999999999999998876 999997
No 29
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.72 E-value=2.6e-17 Score=142.86 Aligned_cols=101 Identities=10% Similarity=0.181 Sum_probs=90.6
Q ss_pred ccccccccC-cceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcc-ccc----ccccccccccccC
Q 012416 207 TAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDY----RDAVPLRKMIIRR 280 (464)
Q Consensus 207 tV~dIMtPR-~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~-~~~----~~~~~V~dIM~r~ 280 (464)
+|+++|+|+ .+++++++++|+. ++++.|.+++++.+||++ + ++++|+|+.+|+++ ... ....++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999976 6889999999998 999999999999999998 4 89999999999985 221 1256899999899
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 281 ~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+.++++++++.++++.|.+++.+.+||+|+
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 113 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLDD 113 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEeC
Confidence 999999999999999999999999999995
No 30
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.71 E-value=3.3e-17 Score=142.26 Aligned_cols=104 Identities=13% Similarity=0.277 Sum_probs=91.6
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchh-cccccc---cccccccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL-LSVDYR---DAVPLRKMII 278 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDL-l~~~~~---~~~~V~dIM~ 278 (464)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+ +..... ...++.++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 567899999986 677899999998 99999999999999999865 899999999999 764332 2468999988
Q ss_pred cCCcEecCCCCHHHHHHHHHhCC-----CcEEEEEec
Q 012416 279 RRIPRVSEDMPLYDILNEFQKGH-----SHIAVVYKD 310 (464)
Q Consensus 279 r~~~~V~e~~~l~eaL~~m~~~~-----~~~a~VVDe 310 (464)
+++.++++++++.++++.|.+++ .+.+||+|+
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~ 117 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK 117 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC
Confidence 89999999999999999999999 999999997
No 31
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.71 E-value=2.9e-17 Score=146.38 Aligned_cols=102 Identities=9% Similarity=0.153 Sum_probs=91.3
Q ss_pred cccccccccC----cceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc-----cccccccc
Q 012416 206 KTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKM 276 (464)
Q Consensus 206 itV~dIMtPR----~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~-----~~~~V~dI 276 (464)
.+|+|+|+|+ .+++++++++|+. ++++.|.+++++.+||.+ + ++++|+|+.+|+++.... ...++.++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD-G-DDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES-S-SSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee-C-CEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999987 6788999999998 999999999999999954 3 899999999999875422 24689999
Q ss_pred cccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 277 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 277 M~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 117 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDG 117 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 9889999999999999999999999999999996
No 32
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.71 E-value=4.2e-17 Score=142.74 Aligned_cols=101 Identities=11% Similarity=0.125 Sum_probs=90.2
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCC--cEEEEEEcchhcccccc---ccccccccccc
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT--NIIGLILVKNLLSVDYR---DAVPLRKMIIR 279 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d--~iVGIVt~kDLl~~~~~---~~~~V~dIM~r 279 (464)
..+|+++|++ +++++++++|+. ++++.|.+++++++||++++ + +++|+|+.+|++..... ...++.++|.+
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~ 79 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANS 79 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBC
T ss_pred ceEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCC
Confidence 3689999986 788999999998 99999999999999999875 6 89999999999876422 24689999989
Q ss_pred CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 280 ~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++++++ ++.++++.|.+++.+.+||+|+
T Consensus 80 ~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~ 109 (141)
T 2rih_A 80 PITVLDTD-PVHVAAEKMRRHNIRHVVVVNK 109 (141)
T ss_dssp CCEEETTS-BHHHHHHHHHHHTCSEEEEECT
T ss_pred CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC
Confidence 99999999 9999999999999999999997
No 33
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.70 E-value=7.8e-17 Score=144.46 Aligned_cols=103 Identities=17% Similarity=0.256 Sum_probs=91.6
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc----cccccccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMII 278 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~----~~~~V~dIM~ 278 (464)
+.+.+|+++|++ . +++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++..... ...++.++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 367899999985 3 4899999998 99999999999999999865 899999999999875421 2468999988
Q ss_pred c--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 279 R--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 279 r--~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 122 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIKD 122 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 7 8899999999999999999999999999998
No 34
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.70 E-value=4.5e-17 Score=162.24 Aligned_cols=123 Identities=12% Similarity=0.141 Sum_probs=105.3
Q ss_pred CCChhHHHHHHHhhccc-ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 188 DLTHDETTIIAGALELT-EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 188 ~L~~~E~~~I~~vl~l~-~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
.++++|+++++++++|- +.+|+|+|+|+.+++++++++|+. ++++.|.+++++++||++++.++++|+|+.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 46678999999999955 499999999999999999999998 9999999999999999997668999999999998643
Q ss_pred c--------cc------ccccc-------cccccCC--cEecCCCCHHHHHHHHHhCCCcEEEEEecC
Q 012416 267 Y--------RD------AVPLR-------KMIIRRI--PRVSEDMPLYDILNEFQKGHSHIAVVYKDL 311 (464)
Q Consensus 267 ~--------~~------~~~V~-------dIM~r~~--~~V~e~~~l~eaL~~m~~~~~~~a~VVDey 311 (464)
. .. ..++. ++|.+++ .++++++++.++++.|.+++.+.+||+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~ 149 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVD 149 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEE
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCC
Confidence 1 11 22222 3466777 899999999999999999999999999984
No 35
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.69 E-value=1e-16 Score=136.50 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=89.3
Q ss_pred cccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc----cccccccccccCC
Q 012416 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 281 (464)
Q Consensus 206 itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~----~~~~V~dIM~r~~ 281 (464)
++|+++|++ ++.++++++++. ++++.|.+++++++||+| + |+++|+|+.+|+++.... ...++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 368999986 678899999998 999999999999999998 4 899999999999865422 2468999988899
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 282 ~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.++++++++.++++.|.+++.+.+||+|+
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~ 104 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEED 104 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEET
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEEC
Confidence 99999999999999999999999999997
No 36
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.69 E-value=5.9e-17 Score=148.88 Aligned_cols=101 Identities=19% Similarity=0.275 Sum_probs=91.4
Q ss_pred cccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc-----ccccccccccccC
Q 012416 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY-----RDAVPLRKMIIRR 280 (464)
Q Consensus 206 itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~-----~~~~~V~dIM~r~ 280 (464)
.+|+++|++ +++++++++|+. ++++.|.+++++++||++++ |+++|+|+.+|++.... ....++.++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 789999985 788999999998 99999999999999999865 89999999999987543 1246899998889
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 281 ~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++++++++.++++.|.+++.+.+||+|+
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 114 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVDD 114 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEECT
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 999999999999999999999999999998
No 37
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.68 E-value=9.4e-17 Score=146.17 Aligned_cols=105 Identities=19% Similarity=0.246 Sum_probs=92.0
Q ss_pred cccccccccccCcc--eEEE--cCCCChHHHHHHHHHHcCCcEeeEE--ecCCCcEEEEEEcchhccccc----------
Q 012416 204 TEKTAKDAMTPISK--AFSL--DLDATLTLDTLNAIMTMGHSRVPVY--SGNPTNIIGLILVKNLLSVDY---------- 267 (464)
Q Consensus 204 ~~itV~dIMtPR~d--vvtV--~~d~tl~eeal~~m~~~~~Sr~PVv--d~d~d~iVGIVt~kDLl~~~~---------- 267 (464)
.+.+|+++|+|..+ ++++ ++++++. ++++.|.+++++++||+ +++ ++++|+|+.+|++....
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~-~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRES-QRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTT-CBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 67899999998643 6778 9999998 99999999999999999 444 89999999999986532
Q ss_pred ------------------ccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 268 ------------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 268 ------------------~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
....++.++|.+++++|++++++.++++.|.+++.+.+||+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 147 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN 147 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEEC
Confidence 1246789998889999999999999999999999999999985
No 38
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.68 E-value=4.2e-17 Score=162.40 Aligned_cols=124 Identities=12% Similarity=0.251 Sum_probs=100.5
Q ss_pred ccCCCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhc
Q 012416 184 GKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 263 (464)
Q Consensus 184 ~~~G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl 263 (464)
+..|.+.+.+++.+++.+ .+.+|+|+|+|+.++++++.++|+. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~l--~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTFM--KSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHHH--HHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHHH--HcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 445778778888888874 7889999999999999999999998 9999999999999999997667899999999997
Q ss_pred cccccc------------cc-------ccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 264 SVDYRD------------AV-------PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 264 ~~~~~~------------~~-------~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
...... .. +++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 157 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP 157 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC
Confidence 642110 11 234667889999999999999999999999999999996
No 39
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.68 E-value=1.7e-16 Score=141.72 Aligned_cols=103 Identities=20% Similarity=0.240 Sum_probs=91.4
Q ss_pred cccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcE-eeEEecCCCcEEEEEEcchhccccc-------------
Q 012416 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSR-VPVYSGNPTNIIGLILVKNLLSVDY------------- 267 (464)
Q Consensus 202 ~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr-~PVvd~d~d~iVGIVt~kDLl~~~~------------- 267 (464)
.+...+|+++|++ +++++++++|+. ++++.|.++++++ +||+|++ +++|+|+.+|++....
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4567889999986 788999999998 9999999999999 9999864 8999999999986421
Q ss_pred ------ccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 268 ------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 268 ------~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
....++.++|.+ ++++++++++.++++.|.+++.+.+||+|+
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE 134 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC
Confidence 124678999888 999999999999999999999999999997
No 40
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=7.6e-17 Score=139.29 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=90.2
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhc-ccccc----cccccccccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL-SVDYR----DAVPLRKMII 278 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl-~~~~~----~~~~V~dIM~ 278 (464)
.-.+|+++|++ ++.++++++|+. ++++.|.+++++++||+|++ ++++|+|+.+|++ ..... ...++.++|.
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 44689999986 678899999998 99999999999999999865 8999999999998 34322 2467999988
Q ss_pred cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 279 RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 279 r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 113 (133)
T 1y5h_A 82 DSIYYVDANASIQEMLNVMEEHQVRRVPVISE 113 (133)
T ss_dssp TCCCCEETTCCHHHHHHHHHHHTCSEEEEEET
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC
Confidence 89999999999999999999999999999997
No 41
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.67 E-value=1.8e-16 Score=138.14 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=89.2
Q ss_pred cccccccc---ccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc-----cccccc
Q 012416 203 LTEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLR 274 (464)
Q Consensus 203 l~~itV~d---IMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~-----~~~~V~ 274 (464)
+.+.++++ +|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... ...++.
T Consensus 5 ~~~~~v~~~~~~~~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCCC--CceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 45677888 7864 788899999998 99999999999999999865 899999999999875432 145789
Q ss_pred ccccc------CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 275 KMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 275 dIM~r------~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 122 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 122 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC
Confidence 98876 6889999999999999999999999999997
No 42
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.67 E-value=1.6e-16 Score=142.80 Aligned_cols=103 Identities=19% Similarity=0.236 Sum_probs=91.6
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc------------cccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY------------RDAV 271 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~------------~~~~ 271 (464)
...+|+++|++ +++++++++|+. ++++.|.+++++++||+|++ ++++|+|+.+|++.... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999986 678899999998 99999999999999999865 89999999999986532 1246
Q ss_pred ccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 272 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 272 ~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 117 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK 117 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC
Confidence 899999888999999999999999999999999999987
No 43
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.66 E-value=2.1e-16 Score=140.90 Aligned_cols=110 Identities=12% Similarity=0.160 Sum_probs=91.7
Q ss_pred HHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEec-CCCcEEEEEEcchhccccccc-------
Q 012416 198 AGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSG-NPTNIIGLILVKNLLSVDYRD------- 269 (464)
Q Consensus 198 ~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~-d~d~iVGIVt~kDLl~~~~~~------- 269 (464)
.+.+.+.+.+|+++|++ +++++++++|+. ++++.|.+++++++||+|+ +.++++|+|+.+|++......
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 44566788999999986 678899999998 9999999999999999985 248999999999998654221
Q ss_pred -ccccccccccC------CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 -AVPLRKMIIRR------IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 -~~~V~dIM~r~------~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..++.++|.++ +.++++++++.++++.|.+++.+.+||+|+
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 129 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSR 129 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEEC
Confidence 24688887766 788999999999999999999999999996
No 44
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.65 E-value=1e-16 Score=158.88 Aligned_cols=126 Identities=13% Similarity=0.209 Sum_probs=106.7
Q ss_pred cCCCCChhHHHHHHHhhcc-cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhc
Q 012416 185 KGGDLTHDETTIIAGALEL-TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 263 (464)
Q Consensus 185 ~~G~L~~~E~~~I~~vl~l-~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl 263 (464)
+.|.++++|+++++++++| .+.+|+|+|+|+.++++++.++|+. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4567889999999999998 9999999999999999999999999 9999999999999999997667999999999987
Q ss_pred ccccc-----c---------cccccc------ccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEecC
Q 012416 264 SVDYR-----D---------AVPLRK------MIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDL 311 (464)
Q Consensus 264 ~~~~~-----~---------~~~V~d------IM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDey 311 (464)
..... . ...+.+ +|.+++.++++++++.++++.|.+++.+.+||+|++
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 154 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQD 154 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEEC
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecC
Confidence 64210 0 112333 346788999999999999999999999999999984
No 45
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.64 E-value=4.9e-16 Score=138.02 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=89.8
Q ss_pred cccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccc-----ccccccc
Q 012416 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKM 276 (464)
Q Consensus 202 ~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~-----~~~V~dI 276 (464)
.+.+.+|+++ .+++++++++++. ++++.|.+++++.+||+|++ |+++|+|+.+|++...... ..++.++
T Consensus 19 ~l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~ 92 (152)
T 2uv4_A 19 SLEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKA 92 (152)
T ss_dssp BHHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGG
T ss_pred hHHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHH
Confidence 3467788888 3678899999998 99999999999999999865 8999999999998754321 3578898
Q ss_pred cc------cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 277 II------RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 277 M~------r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
|. ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 93 m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 132 (152)
T 2uv4_A 93 LQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE 132 (152)
T ss_dssp GGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC
Confidence 75 78899999999999999999999999999997
No 46
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.64 E-value=6.7e-16 Score=151.21 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=108.4
Q ss_pred cCCHHHHHHHHhhcccccccCCCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeE
Q 012416 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (464)
Q Consensus 166 ~~s~eEL~~lve~~~~e~~~~G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PV 245 (464)
.+|..||...+.. +... .+...+.+++.+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~~-------~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCKD-------SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----cccc-------cccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 5688888877641 1100 334556667778999999997 678899999998 9999999999999999
Q ss_pred EecCCCcEEEEEEcchhccccccc--ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 246 YSGNPTNIIGLILVKNLLSVDYRD--AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 246 vd~d~d~iVGIVt~kDLl~~~~~~--~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+|++ ++++|+++.+|++...... ..+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 130 vd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~ 195 (296)
T 3ddj_A 130 VDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD 195 (296)
T ss_dssp ECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred EcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9865 8999999999998765432 45899999899999999999999999999999999999997
No 47
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.62 E-value=7.7e-16 Score=148.44 Aligned_cols=134 Identities=12% Similarity=0.213 Sum_probs=105.2
Q ss_pred cCCHHHHHHHHhhcccccccCCCCChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeE
Q 012416 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (464)
Q Consensus 166 ~~s~eEL~~lve~~~~e~~~~G~L~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PV 245 (464)
.+|..|+...+.. +...+.+...+ ..+++...+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIREKH---ERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHHTTS---TTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhhhcc---ccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 5688888877641 11111111111 122333447899999996 778899999998 9999999999999999
Q ss_pred EecCCCcEEEEEEcchhccccccc---ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 246 YSGNPTNIIGLILVKNLLSVDYRD---AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 246 vd~d~d~iVGIVt~kDLl~~~~~~---~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+|++ |+++|+++.+|+++..... ..++.++|.+++.++++++++.++++.|.+++.+.+||+++
T Consensus 121 vd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~ 187 (280)
T 3kh5_A 121 VNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVSE 187 (280)
T ss_dssp ECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred EcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 9875 8999999999998764332 34789998899999999999999999999999999999943
No 48
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.61 E-value=5.4e-15 Score=139.74 Aligned_cols=100 Identities=15% Similarity=0.107 Sum_probs=90.6
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCcEe
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRV 284 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~~V 284 (464)
.-+++++|++ +++++++++|+. ++++.|.+++++++||+|++ ++++|+|+.+|++.... ..+++++|.+++.++
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v 85 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFV 85 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCE
T ss_pred ccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEE
Confidence 3468999985 778899999998 99999999999999999865 89999999999987654 358999998899999
Q ss_pred cCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 285 SEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 285 ~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++++.++++.|.+++.+.+||+|+
T Consensus 86 ~~~~~l~~a~~~m~~~~~~~lpVvd~ 111 (213)
T 1vr9_A 86 HEEDNITHALLLFLEHQEPYLPVVDE 111 (213)
T ss_dssp ETTSBHHHHHHHHHHCCCSEEEEECT
T ss_pred CCCCcHHHHHHHHHHhCCCEEEEEcC
Confidence 99999999999999999999999997
No 49
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.60 E-value=4.9e-16 Score=169.90 Aligned_cols=105 Identities=17% Similarity=0.053 Sum_probs=91.9
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHH-HcCCcEeeEEecCCCcEEEEEEcchhccccccc-------------
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM-TMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD------------- 269 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~-~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~------------- 269 (464)
.+.+|+|+|+||++++++++++|++ |+.+.|. +++++++||+|++ ++++|+|+.+|+++.....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999999999999999998 9999999 7999999999875 8999999999998753221
Q ss_pred --------------------------------------ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 --------------------------------------AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 --------------------------------------~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..++.++|.+++.+|++++++.++++.|++++.+.+||+|+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEEC
Confidence 00277899999999999999999999999999999999943
No 50
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.59 E-value=5.5e-15 Score=146.45 Aligned_cols=104 Identities=15% Similarity=0.230 Sum_probs=92.2
Q ss_pred ccccccccc---cccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccc-----ccccc
Q 012416 203 LTEKTAKDA---MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLR 274 (464)
Q Consensus 203 l~~itV~dI---MtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~-----~~~V~ 274 (464)
+.+.+++++ |++ +++++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|++.....+ ..+++
T Consensus 184 ~~~~~v~~~~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~ 259 (323)
T 3t4n_C 184 FLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 259 (323)
T ss_dssp GCCSBGGGTTCSBCT--TCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBHH
T ss_pred hhhCcHHHcCCCCCC--CcEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCHH
Confidence 456789999 764 778999999998 99999999999999999875 8999999999998764432 45789
Q ss_pred ccccc------CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 275 KMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 275 dIM~r------~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 260 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 301 (323)
T 3t4n_C 260 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 301 (323)
T ss_dssp HHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred HHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC
Confidence 99877 7899999999999999999999999999997
No 51
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.59 E-value=5e-15 Score=156.95 Aligned_cols=131 Identities=9% Similarity=0.166 Sum_probs=110.8
Q ss_pred cCCHHHHHHHHhhcccccccCCCCC-----hhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCC
Q 012416 166 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (464)
Q Consensus 166 ~~s~eEL~~lve~~~~e~~~~G~L~-----~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~ 240 (464)
.++++|+..++... ...|.+. +++++++++++.+ +++|++ +++++++++|+. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~~----Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARA----GGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHc----CCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 56788999888632 2223444 6778888888754 779996 788899999998 99999999999
Q ss_pred cEeeEEe--cCCCcEEEEEEcchhccccccccccccccccc-CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 241 SRVPVYS--GNPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 241 Sr~PVvd--~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r-~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+++||++ ++ ++++|+|+.+|++... ..+.++.++|.+ +++++++++++.++++.|++++.+.+||+|+
T Consensus 122 ~~~pVvd~~~~-~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~ 192 (491)
T 1zfj_A 122 SGVPIVETLAN-RKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN 192 (491)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT
T ss_pred CEEEEEEeCCC-CEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9999998 54 8999999999998643 235689999887 8999999999999999999999999999998
No 52
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.58 E-value=2.7e-15 Score=146.87 Aligned_cols=103 Identities=13% Similarity=0.218 Sum_probs=92.3
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc----------ccccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----------DAVPL 273 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~----------~~~~V 273 (464)
.+.+|+++|++ +++++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|++..... ...++
T Consensus 154 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v 229 (296)
T 3ddj_A 154 EIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDDD-NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVV 229 (296)
T ss_dssp CCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBH
T ss_pred ccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCH
Confidence 45689999985 678899999998 99999999999999999865 899999999999876431 24688
Q ss_pred ccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 274 RKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 274 ~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 230 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 266 (296)
T 3ddj_A 230 KDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNK 266 (296)
T ss_dssp HHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 9999889999999999999999999999999999997
No 53
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.57 E-value=7.3e-15 Score=156.94 Aligned_cols=132 Identities=11% Similarity=0.175 Sum_probs=107.1
Q ss_pred ccCCHHHHHHHHhhcccccccCCCCC-----hhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcC
Q 012416 165 VLLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 239 (464)
Q Consensus 165 ~~~s~eEL~~lve~~~~e~~~~G~L~-----~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~ 239 (464)
..+|++++...+...+ .-|.|. +++.++++.++. .+++|++ +++++++++|+. ++++.|.+++
T Consensus 76 dtvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~ 143 (511)
T 3usb_A 76 DTVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYR 143 (511)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHC
T ss_pred hhhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcC
Confidence 4568899877665322 113332 445556777764 5567875 778999999998 9999999999
Q ss_pred CcEeeEEec--CCCcEEEEEEcchhccccccccccccccccc-CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 240 HSRVPVYSG--NPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 240 ~Sr~PVvd~--d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r-~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++||+++ + ++++|+|+.+|++.. .....++.++|.+ +++++++++++.++++.|++++.+.+||+|+
T Consensus 144 ~s~~pVvd~g~~-~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe 215 (511)
T 3usb_A 144 ISGVPVVNNLDE-RKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN 215 (511)
T ss_dssp CSEEEEESCTTT-CBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred CcEEEEEecCCC-CEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC
Confidence 999999986 5 899999999999863 2335789999887 8999999999999999999999999999998
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.57 E-value=1.5e-14 Score=139.39 Aligned_cols=101 Identities=14% Similarity=0.234 Sum_probs=87.6
Q ss_pred ccccc-cccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccc----------------
Q 012416 207 TAKDA-MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD---------------- 269 (464)
Q Consensus 207 tV~dI-MtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~---------------- 269 (464)
+++++ |++ +++++++++|+. ++++.|.+++++++||++++.|+++|+++.+|++......
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 45554 554 789999999998 9999999999999999986448999999999998654211
Q ss_pred --ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 --AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 --~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 123 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVND 123 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC
Confidence 34789999889999999999999999999999999999998
No 55
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.56 E-value=8.3e-16 Score=163.67 Aligned_cols=132 Identities=15% Similarity=0.246 Sum_probs=102.6
Q ss_pred ccCCHHHHHHHHhhcccccccCCCC-----ChhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcC
Q 012416 165 VLLRRAELKTFVNFHGNEAGKGGDL-----THDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 239 (464)
Q Consensus 165 ~~~s~eEL~~lve~~~~e~~~~G~L-----~~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~ 239 (464)
..+|++++...+...+ .-|.| .++++++++++ ++++++|++ +++++++++|+. ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~~G----GiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQEG----GIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHcC----CcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 4678999988876421 22344 66778899988 466889984 788999999998 9999999999
Q ss_pred CcEeeEEecCCCcEEEEEEcchhcccccccccccccccc-c-CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 240 HSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 240 ~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~-r-~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++||++++ ++++|+|+.+|++... ....++.++|. + +++++++++++.++++.|++++.+.+||+|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~~-~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 190 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFVT-DLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND 190 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTCC-CTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhcc-cCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999875 8999999999998432 33568999987 4 5899999999999999999999999999999
No 56
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.56 E-value=5.6e-15 Score=141.61 Aligned_cols=102 Identities=17% Similarity=0.243 Sum_probs=89.5
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc----------------
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------------- 268 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~---------------- 268 (464)
..+|+|+|++ +++++++++++. ++++.|.+++++++||+|++ |+++|+++.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999985 678899999998 99999999999999999875 899999999999754210
Q ss_pred --------------------------------------------------------------------------------
Q 012416 269 -------------------------------------------------------------------------------- 268 (464)
Q Consensus 269 -------------------------------------------------------------------------------- 268 (464)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------cccccccccc-cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 269 ---------------------DAVPLRKMII-RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 269 ---------------------~~~~V~dIM~-r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|+
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~ 225 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE 225 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC
Confidence 0235778888 89999999999999999999999999999998
No 57
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.55 E-value=1.2e-14 Score=141.87 Aligned_cols=59 Identities=15% Similarity=0.129 Sum_probs=52.8
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecC-CCcEEEEEEcchhcc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN-PTNIIGLILVKNLLS 264 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d-~d~iVGIVt~kDLl~ 264 (464)
..+++|+|+|++ +++++.+++++. ++.+.|.+++++++||++++ .++++|+|+.+||+.
T Consensus 10 ~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 10 KYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred cCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 467899999985 789999999998 99999999999999999864 267999999999975
No 58
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.53 E-value=1.2e-14 Score=155.52 Aligned_cols=103 Identities=13% Similarity=0.172 Sum_probs=89.7
Q ss_pred ccccccccccccCcceEEEcCC-CChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc----ccccccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLD-ATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMI 277 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d-~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~----~~~~V~dIM 277 (464)
+.+.+|+++|++ ++++++++ +|+. ++++.|.+++++++||+|++.++++|+|+.+|+++.... ...++.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 567899999985 78889999 9998 999999999999999998333899999999999865422 246899999
Q ss_pred ccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 278 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 278 ~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++.+|++++++.++++.|.+++ ++||+|+
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~ 488 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGK 488 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeC
Confidence 999999999999999999997765 5799998
No 59
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.53 E-value=1.5e-14 Score=139.86 Aligned_cols=99 Identities=22% Similarity=0.250 Sum_probs=71.4
Q ss_pred cccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCcEec
Q 012416 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 285 (464)
Q Consensus 206 itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~~V~ 285 (464)
++|+++|++ +++++++++|+. ++++.|.+++++++||++++ |+++|+++.+|++.... ..+++++|.+++++++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 368999995 788899999998 99999999999999999864 89999999999987654 3578999888899999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 286 EDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 286 e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+++++.++++.|.+++.+.+||+|+
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999999999999999999998
No 60
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.52 E-value=4.4e-14 Score=136.70 Aligned_cols=103 Identities=14% Similarity=0.169 Sum_probs=89.8
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhc------cccc----------
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL------SVDY---------- 267 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl------~~~~---------- 267 (464)
.+.+++++|++ +++++++++++. ++.+.|.+++++++||++++ ++++|+++.+|++ +...
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 199 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLK-AALKALLLSNSMALPVVDSE-GNLVGIVDETDLLRDSEIVRIMKSTELAASSEE 199 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHH-HHHHHHHTCSSSEEEEECTT-SCEEEEEEGGGGGGCGGGCC-------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHhhhhhhhhhhccchhhhhhhh
Confidence 36789999974 677899999998 99999999999999999865 7999999999998 4331
Q ss_pred ------------------ccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 268 ------------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 268 ------------------~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
....+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 260 (282)
T 2yzq_A 200 EWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRG 260 (282)
T ss_dssp -------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred hhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECC
Confidence 0146789999999999999999999999999999999999997
No 61
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.48 E-value=4.2e-15 Score=158.50 Aligned_cols=136 Identities=11% Similarity=0.102 Sum_probs=20.4
Q ss_pred ccCCHHHHHHHHhhccccc--ccCCCCChhHHHHHHHhhcccccccccc-cccCcceEEEcCCCChHHHHHHHHHHcCCc
Q 012416 165 VLLRRAELKTFVNFHGNEA--GKGGDLTHDETTIIAGALELTEKTAKDA-MTPISKAFSLDLDATLTLDTLNAIMTMGHS 241 (464)
Q Consensus 165 ~~~s~eEL~~lve~~~~e~--~~~G~L~~~E~~~I~~vl~l~~itV~dI-MtPR~dvvtV~~d~tl~eeal~~m~~~~~S 241 (464)
..++++++...+...+..+ ++ +.-.+++++++.++.. .++ |++ +++++++++|+. ++++.|.+++++
T Consensus 60 ~~vt~~~la~~la~~gg~G~I~~-~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~s 129 (503)
T 1me8_A 60 QSVSGEKMAIALAREGGISFIFG-SQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTTHN 129 (503)
T ss_dssp TTTCSHHHHHHHHHTTCEEEECC-SSCHHHHHHHHHHHHT------TTC-------------------------------
T ss_pred hhhhHHHHHHHHHhCCCcceeeC-CCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcCce
Confidence 3567889887775321100 01 1112466777766553 455 986 788999999998 999999999999
Q ss_pred EeeEEecC--CCcEEEEEEcchhcccccccccccccccccC--CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 242 RVPVYSGN--PTNIIGLILVKNLLSVDYRDAVPLRKMIIRR--IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 242 r~PVvd~d--~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~--~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++||++++ .++++|+|+.+|++........+++++|.++ ++++++++++.++++.|++++.+.+||+|+
T Consensus 130 ~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe 202 (503)
T 1me8_A 130 TVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD 202 (503)
T ss_dssp -------------------------------------------------------------------------
T ss_pred EEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 99999864 3799999999999863222356899998776 999999999999999999999999999998
No 62
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.48 E-value=1.6e-13 Score=136.58 Aligned_cols=103 Identities=8% Similarity=0.166 Sum_probs=89.8
Q ss_pred ccccccc---ccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc-----ccccccc
Q 012416 204 TEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRK 275 (464)
Q Consensus 204 ~~itV~d---IMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~-----~~~~V~d 275 (464)
...++++ +|++ ++.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|++..... ...++.+
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 4578899 4874 678899999998 99999999999999999865 899999999999875432 1457889
Q ss_pred cccc------CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 276 MIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 276 IM~r------~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 296 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE 296 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 9874 7899999999999999999999999999997
No 63
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.46 E-value=6.1e-15 Score=156.78 Aligned_cols=131 Identities=12% Similarity=0.221 Sum_probs=23.7
Q ss_pred ccCCHHHHHHHHhhcccccccCCCCC-----hhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcC
Q 012416 165 VLLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 239 (464)
Q Consensus 165 ~~~s~eEL~~lve~~~~e~~~~G~L~-----~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~ 239 (464)
..+|++++...+...+ .-|.|. +++++++.++. +++++|++ +++++++++|+. ++++.|.+++
T Consensus 51 ~tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~vk-----~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKVK-----KHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHHH-----HCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhhc-----ccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 4578999988776422 123343 56677777774 57889985 788999999998 9999999999
Q ss_pred CcEeeEEecCCCcEEEEEEcchhcccccccccccccccc-c-CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 240 HSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 240 ~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~-r-~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++++||++ + ++++|+|+.+|+.... ....++.++|. + ++.++++++++.++++.|++++.+.+||+|+
T Consensus 119 ~s~~pVvd-~-g~lvGIVt~rDl~~~~-~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe 188 (490)
T 4avf_A 119 FSGFPVVE-Q-GELVGIVTGRDLRVKP-NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE 188 (490)
T ss_dssp -------------------------------------------------------------------------
T ss_pred CCEEEEEE-C-CEEEEEEEhHHhhhcc-ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 99999998 4 8999999999997432 33568999987 4 6899999999999999999999999999998
No 64
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.45 E-value=9.4e-15 Score=155.07 Aligned_cols=128 Identities=13% Similarity=0.233 Sum_probs=23.1
Q ss_pred cCCHHHHHHHHhhcccccccCCCCC-----hhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCC
Q 012416 166 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (464)
Q Consensus 166 ~~s~eEL~~lve~~~~e~~~~G~L~-----~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~ 240 (464)
..++.|+...+... ...|.+. +++++++++++++. ++|++ +++++++++++. ++++.|.++++
T Consensus 57 ~vt~~ela~ava~~----GglG~i~~~~~~e~~~~~I~~v~~~~-----~~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMARE----GGLGVIHRNMGIEEQVEQVKRVKRAE-----RLIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHhc----CCceeecCCCCHHHHHHHHHhhcchh-----hcccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 56788888777532 1223343 57789999998764 46874 889999999998 99999999999
Q ss_pred cEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 241 SRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 241 Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+++||+++ ++++|+|+.+|++. ....++.++|.+++.++++++++.++++.|++++.+.+||+|+
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde 189 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDE 189 (486)
T ss_dssp ----------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec
Confidence 99999986 89999999999986 3356899998888999999999999999999999999999998
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.44 E-value=5.5e-13 Score=132.56 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=88.0
Q ss_pred ccccccc--cccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccc-----cccccccc
Q 012416 205 EKTAKDA--MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKMI 277 (464)
Q Consensus 205 ~itV~dI--MtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~-----~~~V~dIM 277 (464)
..+++++ |+ ..+++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|++...... ..++.++|
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~ 265 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 265 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHG
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHH
Confidence 3456666 54 24678899999998 99999999999999999865 8999999999999765432 35788887
Q ss_pred ------ccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 278 ------IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 278 ------~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 266 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~ 304 (330)
T 2v8q_E 266 QHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE 304 (330)
T ss_dssp GGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC
Confidence 478999999999999999999999999999998
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.29 E-value=4.3e-13 Score=142.33 Aligned_cols=108 Identities=7% Similarity=0.169 Sum_probs=5.8
Q ss_pred HHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccc
Q 012416 193 ETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVP 272 (464)
Q Consensus 193 E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~ 272 (464)
.++.+..++ +++++|++ +++++++++|+. ++++.|.+++++.+||+|++ ++++|+|+.+|++... ....+
T Consensus 87 ~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~~-~~~~~ 156 (494)
T 1vrd_A 87 QARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFEK-NLSKK 156 (494)
T ss_dssp HHHHHHHHH-----TC----------------------------------------------------------------
T ss_pred HHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhhc-CCCCc
Confidence 345565554 46789986 788999999998 99999999999999999865 7999999999998642 23468
Q ss_pred ccccccc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 273 LRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 273 V~dIM~r--~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+.++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 157 v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~ 196 (494)
T 1vrd_A 157 IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK 196 (494)
T ss_dssp ----------------------------------------
T ss_pred HHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC
Confidence 9999887 8999999999999999999999999999998
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.15 E-value=5.9e-12 Score=133.30 Aligned_cols=110 Identities=12% Similarity=0.257 Sum_probs=9.8
Q ss_pred hhHHHHHHHhhcccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecC--CCcEEEEEEcchhcccccc
Q 012416 191 HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDYR 268 (464)
Q Consensus 191 ~~E~~~I~~vl~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d--~d~iVGIVt~kDLl~~~~~ 268 (464)
+++.++++.+-.+.. .|+ ++.+++.++.|+. ++++++.+++++.+||+++. .++++|||+.+|+... +
T Consensus 128 e~Qa~~V~~VKr~e~-----g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYEN-----GFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccc-----Ccc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 445677887776654 454 3678999999999 99999999999999999752 3789999999998764 3
Q ss_pred cccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 269 DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 269 ~~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
...+++++|+++++++++..+++++.+.|++++...+||||+
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~ 239 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS 239 (556)
T ss_dssp ------------------------------------------
T ss_pred cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEcc
Confidence 356899999999999999999999999999999999999998
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.12 E-value=2e-12 Score=138.02 Aligned_cols=101 Identities=14% Similarity=0.237 Sum_probs=59.0
Q ss_pred ccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecC--CCcEEEEEEcchhccccc-cccccccccccc--CC
Q 012416 207 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDY-RDAVPLRKMIIR--RI 281 (464)
Q Consensus 207 tV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d--~d~iVGIVt~kDLl~~~~-~~~~~V~dIM~r--~~ 281 (464)
+++++|++ +++++++++|+. ++++.|.+++++++||+|++ .++++|+|+.+|+..... ....++.++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899985 677899999998 99999999999999999862 379999999999986431 234689999887 89
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 282 ~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+++++++++.++++.|.+++.+.+||||+
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~ 214 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVND 214 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESS
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECC
Confidence 99999999999999999999999999998
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.77 E-value=9.9e-09 Score=80.61 Aligned_cols=65 Identities=14% Similarity=0.285 Sum_probs=54.9
Q ss_pred ceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc-c----cccccccccccCCcEe
Q 012416 217 KAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY-R----DAVPLRKMIIRRIPRV 284 (464)
Q Consensus 217 dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~-~----~~~~V~dIM~r~~~~V 284 (464)
+++++++++|+. ++++.|.+++++.+||+++ |+++|+++.+|+++... . .+.+++++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367899999999 9999999999999999974 79999999999975422 1 2468999999988764
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.56 E-value=9.9e-08 Score=73.00 Aligned_cols=64 Identities=13% Similarity=0.256 Sum_probs=54.1
Q ss_pred eEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc-----cccccccccccCCcEe
Q 012416 218 AFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKMIIRRIPRV 284 (464)
Q Consensus 218 vvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~-----~~~~V~dIM~r~~~~V 284 (464)
++++++++++. ++++.|.+++++.+||+++ ++++|+|+.+|+++.... ...+++++|.+++.++
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 57899999998 9999999999999999985 899999999999876422 2467999988777653
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.55 E-value=4e-08 Score=92.42 Aligned_cols=103 Identities=12% Similarity=0.150 Sum_probs=53.5
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCc-E
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP-R 283 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~-~ 283 (464)
+.+|+++|++ +++++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|++...... ....+.+.+-.+ .
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 3469999996 678899999998 99999999999999999875 8999999999998765332 122333222111 1
Q ss_pred ecCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 012416 284 VSEDMPLYDILNEFQKGHSHIAVVYKDLN 312 (464)
Q Consensus 284 V~e~~~l~eaL~~m~~~~~~~a~VVDeyG 312 (464)
.....++.++.+.|.+++.+.++|++.+|
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp -----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 23344699999999999999999987644
No 72
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.28 E-value=4.4e-07 Score=86.41 Aligned_cols=60 Identities=20% Similarity=0.240 Sum_probs=50.2
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
...+|+++|+| ++++++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|+++..
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYSNYPVIDEN-NKVVGSIARFHLISTH 242 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEECC------
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCceEEEEcCC-CeEEEEEEHHHhhchh
Confidence 46789999997 6889999999998 99999999999999999876 8999999999998754
No 73
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.26 E-value=7.3e-07 Score=80.14 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=39.2
Q ss_pred ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 ~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+.+++++|.+++.+|++++++.+|++.|.+++.+.+||+|+
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 57 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ 57 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC
Confidence 46899999999999999999999999999999999999998
No 74
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.13 E-value=2.1e-06 Score=75.60 Aligned_cols=61 Identities=16% Similarity=0.268 Sum_probs=54.3
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~ 268 (464)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+| + |+++|+|+.+|++.....
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 357889999986 678899999998 999999999999999998 4 899999999999987543
No 75
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.10 E-value=3.1e-06 Score=75.05 Aligned_cols=63 Identities=16% Similarity=0.196 Sum_probs=56.1
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCC---cEEEEEEcchhccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT---NIIGLILVKNLLSVDY 267 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d---~iVGIVt~kDLl~~~~ 267 (464)
..+.+|+++|+++.+++++++++++. ++++.|.+++++++||++++ | +++|+|+.+|++....
T Consensus 78 ~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 78 LTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp TTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHHHH
T ss_pred ccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHHHH
Confidence 46789999999766788999999998 99999999999999999875 6 8999999999987643
No 76
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.08 E-value=3.8e-06 Score=70.40 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=52.7
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
...+++++|.+ ++.++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|++....
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLFG 119 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHC
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHhh
Confidence 34489999986 667889999998 99999999999999999875 89999999999987643
No 77
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.08 E-value=7.1e-06 Score=64.13 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=28.4
Q ss_pred CcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 281 ~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+++|++++++.+|++.|.+++.+.+||+|+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~ 31 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 568999999999999999999999999986
No 78
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.04 E-value=9.2e-06 Score=70.84 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=38.3
Q ss_pred cccccccccc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 ~~~V~dIM~r--~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~ 64 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK 64 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC
Confidence 4679999987 8999999999999999999999999999987
No 79
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.02 E-value=6e-06 Score=70.66 Aligned_cols=60 Identities=25% Similarity=0.419 Sum_probs=53.6
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||++ + |+++|+|+.+|++....
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHHH
Confidence 457889999986 678899999998 999999999999999998 5 89999999999987643
No 80
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.01 E-value=4.2e-06 Score=72.31 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=52.3
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
.+.+++++|+| +.++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++....
T Consensus 68 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 68 DSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC-
T ss_pred CCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHHh
Confidence 56789999975 67899999998 99999999999999999865 89999999999997654
No 81
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.01 E-value=1e-05 Score=61.49 Aligned_cols=31 Identities=13% Similarity=0.118 Sum_probs=28.9
Q ss_pred CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 280 ~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
++.++++++++.++++.|++++.+.+||+|+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~ 31 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG 31 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 4578999999999999999999999999997
No 82
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.00 E-value=1.1e-05 Score=70.56 Aligned_cols=40 Identities=20% Similarity=0.351 Sum_probs=37.6
Q ss_pred ccccccccc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~dIM~r--~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~ 69 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD 69 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC
Confidence 478999888 8999999999999999999999999999997
No 83
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=97.98 E-value=1.3e-05 Score=72.22 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=52.5
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
.+.+++++| + ++.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|++....
T Consensus 105 ~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~l~ 163 (172)
T 3lhh_A 105 ERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDALT 163 (172)
T ss_dssp CCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred CcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHHHh
Confidence 467899999 3 678899999998 99999999999999999875 89999999999997653
No 84
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.97 E-value=1.1e-05 Score=73.18 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=54.8
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~ 268 (464)
..+.+++++|.+ +++++++++++. ++++.|.+++.+++||++++ |+++|+|+.+|++.....
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTSCH
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHHh
Confidence 456789999986 678899999998 99999999999999999875 899999999999976543
No 85
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.97 E-value=7.3e-06 Score=68.79 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=53.5
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
+.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ |+++|+|+.+|++....
T Consensus 62 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 62 LAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHHC
T ss_pred ccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 457889999986 677899999998 9999999999999999986 89999999999987643
No 86
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.96 E-value=1.3e-05 Score=68.58 Aligned_cols=40 Identities=13% Similarity=0.185 Sum_probs=37.7
Q ss_pred cccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 46 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND 46 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 5789999899999999999999999999999999999996
No 87
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.96 E-value=4.1e-06 Score=72.52 Aligned_cols=61 Identities=21% Similarity=0.394 Sum_probs=53.1
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
..+.+++++|++ +++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++...
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAAL 142 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHHH
Confidence 356789999997 567889999998 99999999999999999865 89999999999997654
No 88
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.96 E-value=1.5e-05 Score=68.80 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=37.6
Q ss_pred cccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 44 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR 44 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 4688999888999999999999999999999999999997
No 89
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.95 E-value=1.4e-05 Score=70.97 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=37.6
Q ss_pred cccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~ 44 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA 44 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 4788999888999999999999999999999999999997
No 90
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.94 E-value=1.2e-05 Score=68.35 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=38.7
Q ss_pred ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 ~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
+.+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 44 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG 44 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC
Confidence 46789999999999999999999999999999999999997
No 91
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.93 E-value=1.1e-05 Score=70.90 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=52.7
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
.+.+++++| + ++.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++....
T Consensus 84 ~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 84 DKAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEELF 142 (153)
T ss_dssp TTSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHHH
T ss_pred CCCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHHh
Confidence 367899999 3 678999999998 99999999999999999875 89999999999997654
No 92
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.93 E-value=1.4e-05 Score=70.19 Aligned_cols=40 Identities=5% Similarity=-0.066 Sum_probs=37.2
Q ss_pred cccccccc--cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~dIM~--r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++++|. ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 56 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC
Confidence 46899988 67899999999999999999999999999997
No 93
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.92 E-value=1.7e-05 Score=67.82 Aligned_cols=40 Identities=8% Similarity=0.163 Sum_probs=37.5
Q ss_pred cccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 47 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD 47 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC
Confidence 5788998889999999999999999999999999999997
No 94
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.92 E-value=1.3e-05 Score=70.24 Aligned_cols=60 Identities=17% Similarity=0.255 Sum_probs=52.6
Q ss_pred ccccccccccC----cceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 205 EKTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 205 ~itV~dIMtPR----~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
+.+++++|.++ .++.++++++++. ++++.|.+++.+++||+|++ |+++|+|+.+|++...
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 56799999743 4678899999998 99999999999999999875 8999999999998654
No 95
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.91 E-value=7.8e-06 Score=72.13 Aligned_cols=60 Identities=20% Similarity=0.330 Sum_probs=53.3
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
..+.+++++|++ ++++++++++. ++++.|.+++++++||+|++ |+++|+|+.+|++....
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLALW 152 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHHH
Confidence 467889999986 67899999998 99999999999999999865 89999999999987653
No 96
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.91 E-value=1.3e-05 Score=71.31 Aligned_cols=62 Identities=15% Similarity=0.216 Sum_probs=54.7
Q ss_pred cccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc
Q 012416 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (464)
Q Consensus 202 ~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~ 268 (464)
...+.+|+++|++ +++++++++++. ++++.|.+++++++||+++ |+++|+|+.+|++.....
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTTC
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHH
Confidence 3457899999985 678899999998 9999999999999999986 899999999999977543
No 97
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.90 E-value=2.6e-05 Score=66.26 Aligned_cols=40 Identities=15% Similarity=0.214 Sum_probs=37.3
Q ss_pred cccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 4 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 43 (133)
T 2ef7_A 4 EIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDG 43 (133)
T ss_dssp CBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred ccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEEC
Confidence 4789998888999999999999999999999999999995
No 98
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.90 E-value=1.1e-05 Score=68.96 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=51.1
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
.+.+++++|+| +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|++...
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQI 124 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999964 67899999998 99999999999999999875 8999999999998764
No 99
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.89 E-value=8.7e-06 Score=72.75 Aligned_cols=62 Identities=21% Similarity=0.374 Sum_probs=54.6
Q ss_pred cccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 202 ~l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
...+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|+++...
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~~ 155 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAAL 155 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHHH
Confidence 3457889999986 567899999998 99999999999999999865 89999999999987653
No 100
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.87 E-value=1.5e-05 Score=68.02 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=51.3
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
.+.+++++|+| +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEHL 127 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHHH
Confidence 36789999963 57899999998 99999999999999999875 8999999999998754
No 101
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.87 E-value=1.1e-05 Score=68.64 Aligned_cols=58 Identities=10% Similarity=0.132 Sum_probs=51.3
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
.+.+++++|+| +.++++++++. ++++.|.+++..++||+|++ |+++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999964 46799999998 99999999999999999865 8999999999998754
No 102
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.86 E-value=9.9e-06 Score=68.97 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=52.7
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
.+.+++++|++ ++.++++++++. ++++.|.+++.+++||+++ |+++|+|+.+|+++...
T Consensus 72 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 72 NTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHLP 130 (133)
T ss_dssp TTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTCC
T ss_pred cccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 46789999986 677899999998 9999999999999999986 79999999999987643
No 103
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.85 E-value=1.5e-05 Score=69.31 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=37.3
Q ss_pred ccccccccc--cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 ~~~V~dIM~--r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..+++++|. ++++++++++++.++++.|.+++.+.+||+|+
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~ 56 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP 56 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC
Confidence 357899987 45899999999999999999999999999997
No 104
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.85 E-value=2.6e-05 Score=75.66 Aligned_cols=41 Identities=7% Similarity=0.235 Sum_probs=38.8
Q ss_pred ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 ~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
...++++|.+++.+|++++++.++.+.|.+++.+.+||||+
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~ 52 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT 52 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec
Confidence 46799999999999999999999999999999999999997
No 105
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.84 E-value=1.3e-05 Score=68.66 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=50.4
Q ss_pred ccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 205 ~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
..+++++|. ++.++++++++. ++++.|.+++.+.+||+|++ |+++|+|+.+|++...
T Consensus 69 ~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 69 KEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEEI 125 (130)
T ss_dssp HHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred hhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHHH
Confidence 457899994 467899999998 99999999999999999865 8999999999998764
No 106
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.84 E-value=2.5e-05 Score=69.74 Aligned_cols=39 Identities=5% Similarity=-0.039 Sum_probs=35.3
Q ss_pred ccccccc--cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 272 PLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 272 ~V~dIM~--r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.++++|+ .++.+|++++++.+|++.|.+++...+||+|+
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~ 56 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD 56 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC
Confidence 5678875 46889999999999999999999999999997
No 107
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.80 E-value=2.5e-05 Score=68.84 Aligned_cols=40 Identities=15% Similarity=0.141 Sum_probs=37.3
Q ss_pred ccccccccc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~dIM~r--~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 55 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP 55 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC
Confidence 578899877 7999999999999999999999999999997
No 108
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.80 E-value=2.7e-05 Score=68.11 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=37.5
Q ss_pred cccccccccc--CCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 AVPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 ~~~V~dIM~r--~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|+
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~ 52 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT 52 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC
Confidence 3578899876 8899999999999999999999999999997
No 109
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.79 E-value=1.8e-05 Score=69.94 Aligned_cols=55 Identities=16% Similarity=0.197 Sum_probs=49.8
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 263 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl 263 (464)
.+.+++++|+| +.++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhc
Confidence 46789999975 67899999998 99999999999999999875 8999999999986
No 110
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.79 E-value=4.4e-05 Score=65.41 Aligned_cols=40 Identities=10% Similarity=0.350 Sum_probs=36.0
Q ss_pred ccccc---ccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 271 VPLRK---MIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 271 ~~V~d---IM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
.++++ +|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 50 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE 50 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC
Confidence 35666 77788999999999999999999999999999997
No 111
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.79 E-value=1.1e-05 Score=85.85 Aligned_cols=100 Identities=15% Similarity=0.201 Sum_probs=20.4
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccccccccccccc--CC
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIR--RI 281 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r--~~ 281 (464)
.+.+|+++|+|..+++++++++++. ++++.|.+++.+.+||+|++ ++++|+|+.+|+++...... ...+.+.+ ..
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4578999999866689999999998 99999999999999999876 89999999999998654321 12222111 11
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEE
Q 012416 282 PRVSEDMPLYDILNEFQKGHSHIAVV 307 (464)
Q Consensus 282 ~~V~e~~~l~eaL~~m~~~~~~~a~V 307 (464)
..++. .+..+.++.|.+.+.+.++|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cccCc-hhHHHHHHHHHhhhccceEE
Confidence 23555 66777789999999887555
No 112
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.78 E-value=1.5e-05 Score=74.66 Aligned_cols=62 Identities=16% Similarity=0.218 Sum_probs=54.8
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~ 268 (464)
..+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++....+
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALVRE 174 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHH
Confidence 356789999985 678899999998 99999999999999999875 899999999999977543
No 113
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.72 E-value=6.5e-05 Score=80.06 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=81.3
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 282 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~ 282 (464)
-.+.+++++|++ .++++++++.++. ++++.|.+++...+||+|++ ++++|+|+.+|+++..... ....+.+.+..+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceee
Confidence 356789999996 5778999999998 99999999999999999876 8999999999999765432 233343333332
Q ss_pred --EecCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 012416 283 --RVSEDMPLYDILNEFQKGHSHIAVVYKDLN 312 (464)
Q Consensus 283 --~V~e~~~l~eaL~~m~~~~~~~a~VVDeyG 312 (464)
.+.......+.++.+.+.+.+.+.|....|
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred eeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 354455667778888999999887765543
No 114
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.69 E-value=5.7e-05 Score=66.28 Aligned_cols=41 Identities=12% Similarity=0.226 Sum_probs=38.1
Q ss_pred ccccccccccCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 ~~~V~dIM~r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..+++++|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~ 52 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES 52 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec
Confidence 45789999889999999999999999999999999999985
No 115
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.68 E-value=6.9e-05 Score=67.95 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=37.2
Q ss_pred ccccccccc--cCCcEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 270 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 270 ~~~V~dIM~--r~~~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..+++++|. ++++++++++++.++++.|.+++...+||+|+
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~ 77 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG 77 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC
Confidence 468999986 46889999999999999999999999999987
No 116
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.60 E-value=7.1e-05 Score=67.15 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=36.3
Q ss_pred ccccccccccC----CcEe--cCCCCHHHHHHHHHhCCCcEEEEE--ec
Q 012416 270 AVPLRKMIIRR----IPRV--SEDMPLYDILNEFQKGHSHIAVVY--KD 310 (464)
Q Consensus 270 ~~~V~dIM~r~----~~~V--~e~~~l~eaL~~m~~~~~~~a~VV--De 310 (464)
..+++++|.+. ++++ ++++++.++++.|.+++.+.+||+ |+
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~ 58 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRE 58 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTT
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECC
Confidence 35789998776 7788 999999999999999999999999 55
No 117
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.54 E-value=5.3e-05 Score=73.77 Aligned_cols=62 Identities=16% Similarity=0.295 Sum_probs=53.9
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~ 268 (464)
..+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++.....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC--
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHHH
Confidence 357889999975 678899999998 99999999999999999875 899999999999976543
No 118
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.43 E-value=0.00014 Score=77.43 Aligned_cols=40 Identities=8% Similarity=0.130 Sum_probs=37.8
Q ss_pred ccccccccccCCcEecCC-CCHHHHHHHHHhCCCcEEEEEe
Q 012416 270 AVPLRKMIIRRIPRVSED-MPLYDILNEFQKGHSHIAVVYK 309 (464)
Q Consensus 270 ~~~V~dIM~r~~~~V~e~-~~l~eaL~~m~~~~~~~a~VVD 309 (464)
..+++++|.+++.+++++ +++.++++.|.+++.+.+||+|
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd 423 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD 423 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE
Confidence 367999999999999999 9999999999999999999999
No 119
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.41 E-value=8.3e-05 Score=72.98 Aligned_cols=61 Identities=16% Similarity=0.294 Sum_probs=54.2
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
..+.+|+++|++ +++++++++++. ++++.|.+++.+.+||+|++ |+++|+|+.+|++....
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVID 258 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 357789999985 678899999998 99999999999999999865 89999999999997654
No 120
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.35 E-value=0.00017 Score=78.77 Aligned_cols=57 Identities=5% Similarity=-0.028 Sum_probs=49.4
Q ss_pred ccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccc
Q 012416 207 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (464)
Q Consensus 207 tV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~ 268 (464)
+++++|++ +++++++++++. ++.+.|.+++.+++||+ ++ |+++|+|+.+|+++...+
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVv-e~-G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVT-ER-GKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEE-ET-TEEEEEEEGGGTEECCCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEE-EC-CEEEEEEehhhHHHHHhh
Confidence 48999986 677899999998 99999999999999999 44 899999999999987543
No 121
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.32 E-value=0.00013 Score=77.37 Aligned_cols=101 Identities=14% Similarity=0.126 Sum_probs=16.9
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccccccccccccc--ccCC
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMI--IRRI 281 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM--~r~~ 281 (464)
.+.+|+++|+|+.++++++++.++. ++++.|.+++...+||+|++ ++++|+|+.+|+++...... ...+-- .+-.
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~p~-a~kd~~grl~v~ 221 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAKTYPL-ASKDEQGRLRVG 221 (490)
T ss_dssp ----------------------------------------------------------------CTT-CCBCTTSCBCCE
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhccCcc-hhhhccCcceee
Confidence 4578999999766789999999998 99999999999999999876 89999999999998643211 111110 0111
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEE
Q 012416 282 PRVSEDMPLYDILNEFQKGHSHIAVV 307 (464)
Q Consensus 282 ~~V~e~~~l~eaL~~m~~~~~~~a~V 307 (464)
..+.....-.+.++.+.+.+.+.+.+
T Consensus 222 aavG~~~~~~~~a~~l~~aG~d~I~i 247 (490)
T 4avf_A 222 AAVGTGADTGERVAALVAAGVDVVVV 247 (490)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred eeeccccchHHHHHHHhhcccceEEe
Confidence 22444445566667777777775544
No 122
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.18 E-value=0.00024 Score=74.83 Aligned_cols=61 Identities=16% Similarity=0.303 Sum_probs=54.6
Q ss_pred ccccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhccccc
Q 012416 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (464)
Q Consensus 203 l~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~ 267 (464)
-.+.+++++|++ +++++++++++. ++.+.|.+++...+||+|++ |+++|+|+.+|++....
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHHH
Confidence 367899999985 678899999998 99999999999999999876 89999999999987654
No 123
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.17 E-value=0.00015 Score=76.92 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=44.3
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
.+.+++++|+|+.++++++++.++. ++++.|.+++...+||+|++ |+++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 4678999999766688999999998 99999999999999999976 8999999999999764
No 124
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.15 E-value=0.00024 Score=75.10 Aligned_cols=101 Identities=22% Similarity=0.281 Sum_probs=23.9
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCCc-
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP- 282 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~~- 282 (464)
.+.+++++|+++.+++++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..... ...++...+-..
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~-~~~~D~~~~l~vg 229 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVIEHP-NAARDEKGRLLVG 229 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT-TCCBCTTSCBCCE
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhhccc-cccccchhhhccc
Confidence 3568999999766788999999998 99999999999999999876 8999999999999765322 112221000001
Q ss_pred -EecCCCCHHHHHHHHHhCCCcEEEE
Q 012416 283 -RVSEDMPLYDILNEFQKGHSHIAVV 307 (464)
Q Consensus 283 -~V~e~~~l~eaL~~m~~~~~~~a~V 307 (464)
-+....+..+.+..+.+.+.+.+.+
T Consensus 230 a~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 230 AAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred cccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 2344456677888888888887665
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.93 E-value=0.00048 Score=73.17 Aligned_cols=100 Identities=11% Similarity=0.145 Sum_probs=60.4
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCC--
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 281 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~-- 281 (464)
.+.+++++|+++.+++++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..... ....+ +....
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~-~~~~~-~~~rl~v 246 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNRDYP-LASKD-SQKQLLC 246 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCCCCT-TCCBC-TTSCBCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHhhCc-chhcc-cCCceee
Confidence 4578999999755788999999998 99999999999999999876 8999999999999765432 11112 11111
Q ss_pred -cEecCCCCHHHHHHHHHhCCCcEEEE
Q 012416 282 -PRVSEDMPLYDILNEFQKGHSHIAVV 307 (464)
Q Consensus 282 -~~V~e~~~l~eaL~~m~~~~~~~a~V 307 (464)
..+.......+.++.+.+.+.+.+.+
T Consensus 247 ga~vG~~~~~~~~a~~~~~aG~d~v~i 273 (514)
T 1jcn_A 247 GAAVGTREDDKYRLDLLTQAGVDVIVL 273 (514)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred eeEecCchhhHHHHHHHHHcCCCEEEe
Confidence 12333444666777777788775544
No 126
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.76 E-value=0.0039 Score=65.60 Aligned_cols=100 Identities=12% Similarity=0.150 Sum_probs=71.2
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccC--C
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRR--I 281 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~--~ 281 (464)
.+.+++++|++ .+++++++++++. ++++.|.+++..++||+|++ ++++|+++.+|+++...... ...+...+- .
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 56789999985 2567889999998 99999999999999999876 89999999999997654311 111110000 1
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEE
Q 012416 282 PRVSEDMPLYDILNEFQKGHSHIAVV 307 (464)
Q Consensus 282 ~~V~e~~~l~eaL~~m~~~~~~~a~V 307 (464)
..++......+.++.+.+.+.+.+.+
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~ivi 251 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAIVI 251 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEEEE
T ss_pred EeccCchhHHHHHHHHHHcCCCeEEE
Confidence 12444444556667777778877654
No 127
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.73 E-value=0.00061 Score=72.48 Aligned_cols=59 Identities=19% Similarity=0.298 Sum_probs=0.0
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccc
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~ 266 (464)
.+.+|+++||+ ++++++.+.+++ ++.+.|.+++...+||+|++ ++++|+|+.+|+.+..
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ---------------------------------------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhhh
Confidence 35789999996 799999999998 99999999999999999976 8999999999998753
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.73 E-value=0.00099 Score=70.32 Aligned_cols=99 Identities=18% Similarity=0.254 Sum_probs=18.2
Q ss_pred cccccccccccCcceEEEcCCCChHHHHHHHHHHcCCcEeeEEecCCCcEEEEEEcchhcccccccccccccccccCC--
Q 012416 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 281 (464)
Q Consensus 204 ~~itV~dIMtPR~dvvtV~~d~tl~eeal~~m~~~~~Sr~PVvd~d~d~iVGIVt~kDLl~~~~~~~~~V~dIM~r~~-- 281 (464)
.+.+++++|++ +++++++++++. ++++.|.+++.+.+||+|++ ++++|+|+.+|+++...... ...+.+.+-.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 45689999985 678899999998 99999999999999999875 89999999999998754221 1111111100
Q ss_pred cEecCCCCHHHHHHHHHhCCCcEEEEEec
Q 012416 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD 310 (464)
Q Consensus 282 ~~V~e~~~l~eaL~~m~~~~~~~a~VVDe 310 (464)
..++. .+ .+.+..+.+.+.+.+ |+|.
T Consensus 223 ~~~~~-~~-~~~a~~l~~~gvd~l-vvdt 248 (486)
T 2cu0_A 223 AAVSP-FD-IKRAIELDKAGVDVI-VVDT 248 (486)
T ss_dssp EEECT-TC-HHHHHHHHHTTCSEE-EEEC
T ss_pred ceech-hh-HHHHHHHHHhcCCce-EEEe
Confidence 12333 33 566778888888875 5553
No 129
>2jaf_A Halorhodopsin, HR; chromophore, chloride pump, ION transport, membrane, chloride, receptor, ION pump, transport, sensory transduction; HET: BOG PLM RET; 1.7A {Halobacterium salinarium} PDB: 2jag_A* 1e12_A*
Probab=34.86 E-value=2.2e+02 Score=27.26 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=22.0
Q ss_pred HHHhhhcchHHHHHhHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 012416 111 LMFGEILPQAVCTRYGLTVGATMAPIVRVLLCLFFPISYPI 151 (464)
Q Consensus 111 lifGEiiPK~lA~~~pe~ia~~~a~~l~~~~~ll~Plv~~l 151 (464)
.++++. .|....+ ..+-+....+.+..+.+++||++|.+
T Consensus 178 ~l~~~~-~~~a~~~-~v~~~f~~l~~~v~v~W~iYPI~w~l 216 (274)
T 2jaf_A 178 ALVTDW-AASASSA-GTAEIFDTLRVLVVVLWLGYPIVWAV 216 (274)
T ss_dssp HHHTHH-HHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345554 5544333 33333344455556677889998866
Done!