Query         012417
Match_columns 464
No_of_seqs    201 out of 2467
Neff          11.1
Searched_HMMs 46136
Date          Fri Mar 29 02:25:37 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012417.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012417hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 7.8E-81 1.7E-85  584.8  42.3  406   49-464    25-457 (489)
  2 PLN02500 cytochrome P450 90B1  100.0 2.3E-77 5.1E-82  579.3  45.0  412   49-464    37-461 (490)
  3 PLN02774 brassinosteroid-6-oxi 100.0 1.4E-76 3.1E-81  569.2  43.9  406   49-464    30-435 (463)
  4 KOG0158 Cytochrome P450 CYP3/C 100.0 1.3E-76 2.8E-81  547.3  39.0  400   53-464    34-465 (499)
  5 PLN03141 3-epi-6-deoxocathaste 100.0   5E-76 1.1E-80  564.2  42.5  414   48-464     5-422 (452)
  6 PLN02971 tryptophan N-hydroxyl 100.0 8.5E-75 1.9E-79  565.7  43.9  409   49-464    56-501 (543)
  7 PLN02196 abscisic acid 8'-hydr 100.0 3.4E-74 7.3E-79  552.3  43.7  400   49-464    34-433 (463)
  8 PLN02183 ferulate 5-hydroxylas 100.0   1E-73 2.2E-78  556.5  41.2  405   49-464    35-476 (516)
  9 PLN02687 flavonoid 3'-monooxyg 100.0 3.2E-73 6.9E-78  553.1  44.3  406   49-464    33-473 (517)
 10 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-72 2.8E-77  548.7  45.1  414   48-464    40-458 (490)
 11 PLN02987 Cytochrome P450, fami 100.0 1.8E-72 3.8E-77  538.3  44.0  411   48-464    28-440 (472)
 12 PLN02290 cytokinin trans-hydro 100.0 1.8E-72 3.8E-77  549.2  42.7  408   49-464    41-484 (516)
 13 PLN03234 cytochrome P450 83B1; 100.0 3.9E-72 8.4E-77  545.0  42.9  406   49-464    27-463 (499)
 14 PLN00168 Cytochrome P450; Prov 100.0 1.6E-71 3.6E-76  541.3  45.4  410   49-464    34-484 (519)
 15 PTZ00404 cytochrome P450; Prov 100.0 2.7E-72 5.8E-77  543.8  38.1  401   49-464    28-451 (482)
 16 PLN00110 flavonoid 3',5'-hydro 100.0 2.9E-71 6.2E-76  536.1  42.5  406   48-464    29-464 (504)
 17 PLN02394 trans-cinnamate 4-mon 100.0 3.7E-71   8E-76  538.7  42.3  406   49-464    29-467 (503)
 18 KOG0157 Cytochrome P450 CYP4/C 100.0 3.4E-72 7.3E-77  537.8  32.9  407   49-464    34-465 (497)
 19 PLN03112 cytochrome P450 famil 100.0 7.4E-71 1.6E-75  537.6  42.2  407   48-464    30-472 (514)
 20 PLN02966 cytochrome P450 83A1  100.0 9.5E-71 2.1E-75  534.3  40.2  408   49-464    28-464 (502)
 21 PLN03018 homomethionine N-hydr 100.0   2E-69 4.3E-74  523.9  43.9  409   48-464    38-491 (534)
 22 PLN02169 fatty acid (omega-1)- 100.0 1.6E-69 3.5E-74  522.8  43.0  399   53-464    34-469 (500)
 23 PF00067 p450:  Cytochrome P450 100.0 5.4E-71 1.2E-75  536.5  30.5  405   52-464     1-434 (463)
 24 PLN02655 ent-kaurene oxidase   100.0 4.2E-69 9.2E-74  517.9  40.4  399   52-464     1-432 (466)
 25 PLN03195 fatty acid omega-hydr 100.0 8.7E-69 1.9E-73  522.8  41.1  405   52-464    32-485 (516)
 26 PLN02738 carotene beta-ring hy 100.0 1.5E-67 3.3E-72  516.0  37.9  383   73-464   150-563 (633)
 27 KOG0159 Cytochrome P450 CYP11/ 100.0   3E-67 6.4E-72  473.6  34.6  405   51-464    51-487 (519)
 28 KOG0684 Cytochrome P450 [Secon 100.0 1.2E-66 2.6E-71  457.8  36.9  403   50-464    31-453 (486)
 29 PLN02936 epsilon-ring hydroxyl 100.0 5.7E-66 1.2E-70  498.3  39.6  403   53-464    15-451 (489)
 30 PLN02426 cytochrome P450, fami 100.0 7.8E-64 1.7E-68  482.4  41.8  388   58-464    49-467 (502)
 31 PLN02648 allene oxide synthase 100.0   2E-63 4.4E-68  471.9  28.8  399   48-464    15-455 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.2E-55 2.5E-60  414.4  33.7  350   76-464    24-381 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  69.6     3.1 6.7E-05   26.7   1.4    9  417-425    44-52  (59)
 34 PF12273 RCR:  Chitin synthesis  64.5     4.7  0.0001   31.2   1.8    6   13-18      9-14  (130)
 35 PF15050 SCIMP:  SCIMP protein   53.0      15 0.00032   27.3   2.6   16   49-64     67-83  (133)
 36 PF12554 MOZART1:  Mitotic-spin  51.1      56  0.0012   20.1   4.7   42  292-333     6-47  (48)
 37 PF05952 ComX:  Bacillus compet  50.0      17 0.00037   23.2   2.2   23  314-336     4-26  (57)
 38 PF12508 DUF3714:  Protein of u  49.6      12 0.00027   31.3   2.0   43  355-398    52-94  (200)
 39 TIGR00847 ccoS cytochrome oxid  44.4      46 0.00099   20.8   3.4   26    1-26      1-26  (51)
 40 PF13893 RRM_5:  RNA recognitio  43.7      55  0.0012   20.4   4.1   34   81-114     2-39  (56)
 41 KOG3506 40S ribosomal protein   43.6      11 0.00024   23.5   0.6   10  434-443    13-22  (56)
 42 PF14129 DUF4296:  Domain of un  43.6 1.1E+02  0.0025   21.5   6.7   51  288-338    29-79  (87)
 43 KOG3653 Transforming growth fa  39.5 1.1E+02  0.0024   29.4   6.6   46   76-121   211-257 (534)
 44 PF00558 Vpu:  Vpu protein;  In  39.4      35 0.00075   23.7   2.6   23    1-23      1-23  (81)
 45 KOG0114 Predicted RNA-binding   36.4   1E+02  0.0022   22.6   4.6   61   48-115    10-76  (124)
 46 PF09926 DUF2158:  Uncharacteri  30.6      49  0.0011   20.9   2.1   17   87-103     3-19  (53)
 47 PRK06789 flagellar motor switc  28.2      48   0.001   22.6   1.9   40  361-400    21-63  (74)
 48 PF14550 Peptidase_U35_2:  Puta  27.8      38 0.00083   25.8   1.5   22  377-398    71-92  (122)
 49 PF14483 Cut8_M:  Cut8 dimerisa  27.7      81  0.0018   18.2   2.5   20  312-331    15-35  (38)
 50 PF13625 Helicase_C_3:  Helicas  27.3 1.1E+02  0.0024   23.5   4.0   40   75-116    75-114 (129)
 51 PF10189 DUF2356:  Conserved pr  26.5 3.9E+02  0.0084   23.1   7.3   61  308-368   162-223 (230)
 52 PF14459 Prok-E2_C:  Prokaryoti  25.9      37 0.00081   24.7   1.1   17  429-445   104-120 (131)
 53 PRK00400 hisE phosphoribosyl-A  24.2   3E+02  0.0065   20.4   5.5   78  250-335     5-90  (105)
 54 PF11227 DUF3025:  Protein of u  24.0      52  0.0011   27.7   1.7   20  401-420   192-211 (212)
 55 PF11138 DUF2911:  Protein of u  23.7      82  0.0018   24.9   2.7   39  380-419    53-98  (145)
 56 PF08780 NTase_sub_bind:  Nucle  22.9 2.6E+02  0.0056   21.4   5.3   56  106-163    44-102 (124)
 57 TIGR00589 ogt O-6-methylguanin  22.6   2E+02  0.0043   20.0   4.2   60  324-388     2-66  (80)
 58 PF12273 RCR:  Chitin synthesis  22.5      78  0.0017   24.4   2.4    9   10-18      9-17  (130)
 59 PRK02302 hypothetical protein;  21.8 1.6E+02  0.0036   20.9   3.6   32   84-115    23-54  (89)
 60 PF08776 VASP_tetra:  VASP tetr  21.3 1.9E+02  0.0041   16.9   3.7   15  323-337    10-24  (40)
 61 KOG4189 Uncharacterized conser  21.1 4.9E+02   0.011   21.7  16.6   49  289-337   129-179 (209)
 62 PRK10597 DNA damage-inducible   20.9 2.7E+02  0.0059   19.4   4.4   37   78-114    24-68  (81)
 63 PF10883 DUF2681:  Protein of u  20.7 1.2E+02  0.0025   21.5   2.7   17   10-26      7-23  (87)
 64 TIGR03779 Bac_Flav_CT_M Bacter  20.6      68  0.0015   30.3   2.0   44  355-399   255-298 (410)
 65 COG1270 CbiB Cobalamin biosynt  20.3 6.8E+02   0.015   23.0   8.5   88  245-338    98-186 (320)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.8e-81  Score=584.76  Aligned_cols=406  Identities=25%  Similarity=0.360  Sum_probs=341.4

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccch-hH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP-KS  127 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~-~~  127 (464)
                      .++||||.+||++||++++..    ..+|..+.+|.++|||||++|+|..++|||+|+++++|++.+++..|++++. ..
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~----~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~  100 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGS----LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA  100 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            778999999999999999866    1499999999999999999999999999999999999999999999998875 22


Q ss_pred             H-HHhc-CCCceeec-CChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhc--C-CCeeHHHHHHHHHHHHHH
Q 012417          128 L-TELM-GKSSILLI-NGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQ--D-QPIYIQDESKNIAFQVLV  201 (464)
Q Consensus       128 ~-~~~~-g~~~~~~~-~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~vdl~~~~~~~~~~~i~  201 (464)
                      . ..+. |..++..+ +|+.|+.+||+....+...+..+.+.+.-.++++.+++.+.+  + ++||+...+..++.++|+
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~  180 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVIC  180 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHH
Confidence            3 3344 55688877 899999999999888766655444555557888888887773  2 689999999999999999


Q ss_pred             HHHcCCCChhh----HHHHHHHHHHHhhccc------ccc---ccCCCc--hHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 012417          202 KALINLDPGEQ----MEILKKQFQEFISGLM------SLP---INIPGS--QLYRSLQAKKKMARLIQEIIQSKRDGGMS  266 (464)
Q Consensus       202 ~~~fG~~~~~~----~~~~~~~~~~~~~~~~------~~~---~~~p~~--~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  266 (464)
                      +++||.++..+    ..++.+.+.+....+.      .++   .+++..  ..++......++..++++.+++++++.+.
T Consensus       181 ~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~  260 (489)
T KOG0156|consen  181 RMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGD  260 (489)
T ss_pred             HHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            99999988853    2234444444333221      112   233321  23334445566899999999998775411


Q ss_pred             CCCCcchHHHHHHHccC--CCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcC
Q 012417          267 NINVPKDVIDVLMMNNA--SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLG  344 (464)
Q Consensus       267 ~~~~~~~~~~~ll~~~~--~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  344 (464)
                      +  ..+|++|.+|+..+  +...++++++.+.+.++++||+|||++++.|++.+|++||++|+|+++||+++++    .+
T Consensus       261 ~--~~~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG----~~  334 (489)
T KOG0156|consen  261 E--EGRDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVG----KG  334 (489)
T ss_pred             C--CCCcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CC
Confidence            1  23899999999854  2223899999999999999999999999999999999999999999999999997    55


Q ss_pred             CCCChhhhcCChhHHHHHhhhhcCCCCcc-CcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCC
Q 012417          345 EPLSWSDYLSLPFTQNVITETLRMGNIII-GVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQD  423 (464)
Q Consensus       345 ~~~~~~~l~~lp~L~a~i~E~lRl~~~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  423 (464)
                      +.++.+|+.+||||+|||+|++|+||++| .++|.+.+|+.|+||.|||||.|+++.|++||||++|+||++|+||||++
T Consensus       335 r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~  414 (489)
T KOG0156|consen  335 RLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLD  414 (489)
T ss_pred             CCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcC
Confidence            56999999999999999999999999999 77999999999999999999999999999999999999999999999999


Q ss_pred             CC-CC-CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          424 NK-DI-SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       424 ~~-~~-~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      ++ .. ....++|||.|+|.|||..+|.+++.+++|.||++|+
T Consensus       415 ~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~  457 (489)
T KOG0156|consen  415 SNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFD  457 (489)
T ss_pred             CccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheee
Confidence            84 33 5789999999999999999999999999999999996


No 2  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.3e-77  Score=579.30  Aligned_cols=412  Identities=34%  Similarity=0.720  Sum_probs=341.2

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      .++||||+++|++||++.+......++++.++.+++++||++|+++++++++|+++||+++++++.+++..|+.+.+...
T Consensus        37 ~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~  116 (490)
T PLN02500         37 FNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSI  116 (490)
T ss_pred             CCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHH
Confidence            56899999999999987665322224678889999999999999999999999999999999999988777765544444


Q ss_pred             HHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhcCCCeeHHHHHHHHHHHHHHHHHcCCC
Q 012417          129 TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLD  208 (464)
Q Consensus       129 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~  208 (464)
                      ...+|..++++.+|+.|+++|+++.+.|+..++...+.+.+.+.+..+++.|.+++.+|+.+.+..++++++++++||.+
T Consensus       117 ~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fg~~  196 (490)
T PLN02500        117 GGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIMSMD  196 (490)
T ss_pred             HHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHhCCC
Confidence            45566557788899999999999999999988876457788888888888887777899999999999999999999987


Q ss_pred             Chhh-HHHHHHHHHHHhhccccccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--CCCcchHHHHHHHccCCC
Q 012417          209 PGEQ-MEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSN--INVPKDVIDVLMMNNASD  285 (464)
Q Consensus       209 ~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~--~~~~~~~~~~ll~~~~~~  285 (464)
                      .++. ...+.+.+..+.......+.++|...+++..++.+.+.+++.+.++++++....+  .....|+++.+++.    
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~----  272 (490)
T PLN02500        197 PGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH----  272 (490)
T ss_pred             CCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc----
Confidence            6432 3333444444433322223345554456677778888888888888776532111  11346899999875    


Q ss_pred             CCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh-hcCCCCChhhhcCChhHHHHHhh
Q 012417          286 QPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA-QLGEPLSWSDYLSLPFTQNVITE  364 (464)
Q Consensus       286 ~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~-~~~~~~~~~~l~~lp~L~a~i~E  364 (464)
                      ..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++.+... ..+..++++|+.+||||+|||+|
T Consensus       273 ~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikE  352 (490)
T PLN02500        273 SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINE  352 (490)
T ss_pred             cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHH
Confidence            24899999999999999999999999999999999999999999999999874211 12346899999999999999999


Q ss_pred             hhcCCCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCCC---------CCCCcccc
Q 012417          365 TLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDI---------SNSSFTPF  435 (464)
Q Consensus       365 ~lRl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~---------~~~~~~~F  435 (464)
                      ++|+||+++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++++.         ++..|+||
T Consensus       353 tlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpF  432 (490)
T PLN02500        353 TLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPF  432 (490)
T ss_pred             HHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCC
Confidence            999999999878999999999999999999999999999999999999999999999975432         24689999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          436 GGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       436 g~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |.|+|.|+|+++|.+|+++++|+||++|+
T Consensus       433 G~G~R~CiG~~~A~~el~~~la~ll~~f~  461 (490)
T PLN02500        433 GGGPRLCAGSELAKLEMAVFIHHLVLNFN  461 (490)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHhccE
Confidence            99999999999999999999999999995


No 3  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.4e-76  Score=569.16  Aligned_cols=406  Identities=37%  Similarity=0.727  Sum_probs=347.4

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      +++||||+++|++||++.+.+     ++..++.+++++||++|+++++++++++++||+.+++++.++...|....+...
T Consensus        30 ~~~ppgp~~~P~~G~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~  104 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEFLK-----QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSM  104 (463)
T ss_pred             CCCCCCCCCCCchhhHHHHHH-----hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHH
Confidence            567899999999999988754     577899999999999999999999999999999999999887776654444444


Q ss_pred             HHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhcCCCeeHHHHHHHHHHHHHHHHHcCCC
Q 012417          129 TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLD  208 (464)
Q Consensus       129 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~  208 (464)
                      ...+|.++++..+|+.|+++|+++.+.|+...++..+.+.+.+.++++++.|..++++|+.+.+..+++++++.++||.+
T Consensus       105 ~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~  184 (463)
T PLN02774        105 LDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIAGTL  184 (463)
T ss_pred             HHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHcCCC
Confidence            45677667887899999999999999999888775578899999999999988767899999999999999999999987


Q ss_pred             ChhhHHHHHHHHHHHhhccccccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCcchHHHHHHHccCCCCCC
Q 012417          209 PGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPL  288 (464)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~l  288 (464)
                      .......+.+.+..+......++.++|...+++..++++.+.+.+.+.++++++...    ..+|+++.+++...++..+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~----~~~d~l~~ll~~~~~~~~~  260 (463)
T PLN02774        185 SKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGE----THTDMLGYLMRKEGNRYKL  260 (463)
T ss_pred             ChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCC----CcccHHHHHHhCccCCCCC
Confidence            654444455555555444434455667666677778889999999999998876432    3579999999854444468


Q ss_pred             CHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHHHHhhhhcC
Q 012417          289 TDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRM  368 (464)
Q Consensus       289 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl  368 (464)
                      +++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+..+ .+..++++++.+||||+|||+|+||+
T Consensus       261 s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~-~~~~~~~~~l~~lpyl~a~ikE~lRl  339 (463)
T PLN02774        261 TDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR-PEDPIDWNDYKSMRFTRAVIFETSRL  339 (463)
T ss_pred             CHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC-CCCCCCHHHHhcCcHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999875211 23568999999999999999999999


Q ss_pred             CCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccHHHH
Q 012417          369 GNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLCPGLDLA  448 (464)
Q Consensus       369 ~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~Fg~G~r~C~G~~la  448 (464)
                      +|+++.+.|.+.+|++++||.||||+.|+++.+.+||||++|+||++|+||||++++......++|||+|+|.|||+++|
T Consensus       340 ~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A  419 (463)
T PLN02774        340 ATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELG  419 (463)
T ss_pred             CCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCCcHHHH
Confidence            99999878999999999999999999999999999999999999999999999975433234699999999999999999


Q ss_pred             HHHHHHHHHHHHhhcC
Q 012417          449 RLEASIFLHHLVTQFR  464 (464)
Q Consensus       449 ~~~~~~~l~~ll~~f~  464 (464)
                      .+|++++++.||++|+
T Consensus       420 ~~e~~~~la~Ll~~f~  435 (463)
T PLN02774        420 IVEISTFLHYFVTRYR  435 (463)
T ss_pred             HHHHHHHHHHHHHhce
Confidence            9999999999999996


No 4  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-76  Score=547.33  Aligned_cols=400  Identities=22%  Similarity=0.300  Sum_probs=325.7

Q ss_pred             CCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccc--hhHH-H
Q 012417           53 LGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFY--PKSL-T  129 (464)
Q Consensus        53 pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~--~~~~-~  129 (464)
                      |||+++|++||+..+.+..   .+..+..+...+|||++.++.+.+|.++|+|||.|++|+.+..++|..+.  ...- .
T Consensus        34 ~~~~p~p~~Gn~~~~~~~~---~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~  110 (499)
T KOG0158|consen   34 PGPKPLPFLGNLPGMLKRE---RPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPE  110 (499)
T ss_pred             CCCCCCCcEecHHHHHhcc---CcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCC
Confidence            6888899999999997732   33555555555569999999999999999999999999999988888742  1111 1


Q ss_pred             HhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhcC----CCeeHHHHHHHHHHHHHHHHHc
Q 012417          130 ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQD----QPIYIQDESKNIAFQVLVKALI  205 (464)
Q Consensus       130 ~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~vdl~~~~~~~~~~~i~~~~f  205 (464)
                      +.++..+++.++|+.||++|..++|.|++.+++. +.+.+++.+.++++.+.+.    ..+++.+.+.+++.|+|++++|
T Consensus       111 ~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~-m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~Af  189 (499)
T KOG0158|consen  111 DPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKK-MFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCAF  189 (499)
T ss_pred             CcccccCchhccCchHHHHHHhhccccchhhHHH-HHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhhc
Confidence            1233357888999999999999999999999997 8999999999999988763    2789999999999999999999


Q ss_pred             CCCChhh---HHHHHHHHHHHhhc-cccccc----cCCCchHHH-------HHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 012417          206 NLDPGEQ---MEILKKQFQEFISG-LMSLPI----NIPGSQLYR-------SLQAKKKMARLIQEIIQSKRDGGMSNINV  270 (464)
Q Consensus       206 G~~~~~~---~~~~~~~~~~~~~~-~~~~~~----~~p~~~~~~-------~~~~~~~l~~~~~~~i~~~~~~~~~~~~~  270 (464)
                      |.+.+..   ..++.......... ....+.    .+..+.+.+       .....+.+.+.+.+.++.|.+..    ..
T Consensus       190 G~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~~----~~  265 (499)
T KOG0158|consen  190 GLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKEN----IE  265 (499)
T ss_pred             ccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhcC----CC
Confidence            9987754   22333212222111 000000    011111111       22344556666777777663332    25


Q ss_pred             cchHHHHHHHccCC---C---C-CCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhc
Q 012417          271 PKDVIDVLMMNNAS---D---Q-PLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQL  343 (464)
Q Consensus       271 ~~~~~~~ll~~~~~---~---~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  343 (464)
                      +.|+++.+++.+.+   +   . .+|.++|+++++.+++||.||||+++++++|+|++|||+|+|||+||+++..    .
T Consensus       266 r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~----~  341 (499)
T KOG0158|consen  266 RNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLE----E  341 (499)
T ss_pred             CchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhc----c
Confidence            78999999998631   1   1 4999999999999999999999999999999999999999999999999965    2


Q ss_pred             CCCCChhhhcCChhHHHHHhhhhcCCCCccCcccccccCcccc-CeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCC
Q 012417          344 GEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIK-GYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQ  422 (464)
Q Consensus       344 ~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l  422 (464)
                      ...++++.+.+|+|||+||+||||+||+++.+.|.|++|++++ ++.||||+.|.++.+++||||++||||++|+||||.
T Consensus       342 ~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~  421 (499)
T KOG0158|consen  342 KEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFE  421 (499)
T ss_pred             cCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCC
Confidence            3339999999999999999999999999998899999999999 999999999999999999999999999999999999


Q ss_pred             CCCCC--CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          423 DNKDI--SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       423 ~~~~~--~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      +++.+  ++..|+|||.|||+|+|++||.+|+|+.|++||++|+
T Consensus       422 ~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~  465 (499)
T KOG0158|consen  422 EENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFS  465 (499)
T ss_pred             CCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCE
Confidence            87754  5889999999999999999999999999999999995


No 5  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=5e-76  Score=564.18  Aligned_cols=414  Identities=75%  Similarity=1.250  Sum_probs=353.5

Q ss_pred             CCCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhH
Q 012417           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (464)
Q Consensus        48 ~~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~  127 (464)
                      ++++||||.++|++||++.+.......+++.++.+++++||+||++++++++.|+++||+++++++.+++..|+.+....
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~   84 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKS   84 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchh
Confidence            46789999999999999988653323478999999999999999999999999999999999999998877777554444


Q ss_pred             HHHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhcCCCeeHHHHHHHHHHHHHHHHHcCC
Q 012417          128 LTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINL  207 (464)
Q Consensus       128 ~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~  207 (464)
                      ...++|..+++..+|+.|+++|+++.+.|+...+...+.+.+.+.+.++++.|.+++.+|+.+.+..++++++++++||.
T Consensus        85 ~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~G~  164 (452)
T PLN03141         85 LTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKALISL  164 (452)
T ss_pred             HHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHHcCC
Confidence            55667766788889999999999999999888777656778888888888888766789999999999999999999998


Q ss_pred             CChhhHHHHHHHHHHHhhccccccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC----CCcchHHHHHHHccC
Q 012417          208 DPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI----NVPKDVIDVLMMNNA  283 (464)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~----~~~~~~~~~ll~~~~  283 (464)
                      +.+++...+.+.+..+...+..++.++|...+.+..++.+++.+++.+.+++++.+...+.    ....|+++.+++.. 
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-  243 (452)
T PLN03141        165 EPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDG-  243 (452)
T ss_pred             CchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcC-
Confidence            7765555555566665555444555566666667777889999999999988765432111    02468999999763 


Q ss_pred             CCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHHHHh
Q 012417          284 SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVIT  363 (464)
Q Consensus       284 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~  363 (464)
                       +..+++++++.++..+++||+|||+++++|++++|+.||++|+++++|++++.+.....+..++.+++.+||||+|||+
T Consensus       244 -~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~  322 (452)
T PLN03141        244 -SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVIT  322 (452)
T ss_pred             -CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHH
Confidence             4468999999999999999999999999999999999999999999999988752222345689999999999999999


Q ss_pred             hhhcCCCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCc
Q 012417          364 ETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLCP  443 (464)
Q Consensus       364 E~lRl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~Fg~G~r~C~  443 (464)
                      |++|+||+++.++|.+.+|++++||.||||+.|.++.+.+|+||++|+||++|+||||++++. .+..|+|||+|+|.|+
T Consensus       323 E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~-~~~~~~pFG~G~R~C~  401 (452)
T PLN03141        323 ETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM-NNSSFTPFGGGQRLCP  401 (452)
T ss_pred             HHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC-CCCCCCCCCCCCCCCC
Confidence            999999999888999999999999999999999999999999999999999999999997643 3678999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhhcC
Q 012417          444 GLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       444 G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |++||.+|+++++|.|+++|+
T Consensus       402 G~~lA~~el~~~la~ll~~f~  422 (452)
T PLN03141        402 GLDLARLEASIFLHHLVTRFR  422 (452)
T ss_pred             hHHHHHHHHHHHHHHHHhcCe
Confidence            999999999999999999996


No 6  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=8.5e-75  Score=565.74  Aligned_cols=409  Identities=15%  Similarity=0.193  Sum_probs=322.8

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcC-CeeEeecCCccEEEecChHHHHHHHhcCCccccccchhH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYG-KVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~  127 (464)
                      .++||||+++|++||++.+...   ...+.++.++.++|| +|+++++|++++|+|+||+.+++++.+++..|..++...
T Consensus        56 ~~lPPGP~~lPiiGnl~~l~~~---~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~  132 (543)
T PLN02971         56 HPLPPGPTGFPIVGMIPAMLKN---RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY  132 (543)
T ss_pred             CCCCcCCCCCCcccchHHhccC---CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc
Confidence            4689999999999999887531   124678999999999 899999999999999999999999999888887765433


Q ss_pred             HHHhcCCC---ceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhh----cCCCeeHHHHHHHHHHHHH
Q 012417          128 LTELMGKS---SILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVL  200 (464)
Q Consensus       128 ~~~~~g~~---~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~~i  200 (464)
                      ....+|.+   +++..+|+.|+++|+++.+.+........+.+.++++++.+.+.+.    +++++|+.+.+..++++++
T Consensus       133 ~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  212 (543)
T PLN02971        133 AQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAI  212 (543)
T ss_pred             chhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHH
Confidence            34445532   3677789999999999976655444343477777777777766653    3467999999999999999


Q ss_pred             HHHHcCCCChh--------hHHHHHHHHHHHhhcc-----ccccccCCCc------h-HHHHHHHHHHHHHHHHHHHHHh
Q 012417          201 VKALINLDPGE--------QMEILKKQFQEFISGL-----MSLPINIPGS------Q-LYRSLQAKKKMARLIQEIIQSK  260 (464)
Q Consensus       201 ~~~~fG~~~~~--------~~~~~~~~~~~~~~~~-----~~~~~~~p~~------~-~~~~~~~~~~l~~~~~~~i~~~  260 (464)
                      ++++||.+...        ...+..+.+..+....     ..+..++|..      . .+...+..+.+.+++.+.++++
T Consensus       213 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  292 (543)
T PLN02971        213 KRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDER  292 (543)
T ss_pred             HHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987521        0111122222222111     0111122221      1 1223345666777888888776


Q ss_pred             hcCCCCC-CCCcchHHHHHHHccCC-CC-CCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 012417          261 RDGGMSN-INVPKDVIDVLMMNNAS-DQ-PLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLK  337 (464)
Q Consensus       261 ~~~~~~~-~~~~~~~~~~ll~~~~~-~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  337 (464)
                      ++....+ .....|+++.+++..++ +. .++++++++++.++++||+|||+++++|++++|+.|||+|+|+++||++++
T Consensus       293 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~  372 (543)
T PLN02971        293 IKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV  372 (543)
T ss_pred             HHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            5421111 11246999999986432 22 499999999999999999999999999999999999999999999999998


Q ss_pred             HHHhhcCCCCChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCC
Q 012417          338 ELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQF  416 (464)
Q Consensus       338 ~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F  416 (464)
                      +    .++.++++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.|++||||++|+||++|
T Consensus       373 g----~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F  448 (543)
T PLN02971        373 G----KERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSF  448 (543)
T ss_pred             C----CCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCcccc
Confidence            6    45679999999999999999999999999994 789999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC-----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          417 NPWRWQDNKDI-----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       417 ~P~R~l~~~~~-----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      +||||++++++     ++..|+|||.|+|.|+|++||+.|+++++|.||++|+
T Consensus       449 ~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~  501 (543)
T PLN02971        449 KPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFK  501 (543)
T ss_pred             CcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCE
Confidence            99999975422     2568999999999999999999999999999999995


No 7  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.4e-74  Score=552.26  Aligned_cols=400  Identities=34%  Similarity=0.671  Sum_probs=340.5

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      .+.||||+++|++||++.+..    ++++.++.+++++||+|++++++++++|+++||+++++++.++...|........
T Consensus        34 ~~~Ppgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~  109 (463)
T PLN02196         34 LPLPPGTMGWPYVGETFQLYS----QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCccchHHHHHh----cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHH
Confidence            567999999999999987653    4799999999999999999999999999999999999999887666654333333


Q ss_pred             HHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhcCCCeeHHHHHHHHHHHHHHHHHcCCC
Q 012417          129 TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLD  208 (464)
Q Consensus       129 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~  208 (464)
                      ...+|..+++..+|+.|+++|+++.+.|+...+.. +.+.+.+.+.++++.|. ++++|+.+++..+++++++.++||.+
T Consensus       110 ~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~-~~~~i~~~~~~~~~~~~-~~~v~~~~~~~~~~~~v~~~~~fG~~  187 (463)
T PLN02196        110 ERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRN-MVPDIESIAQESLNSWE-GTQINTYQEMKTYTFNVALLSIFGKD  187 (463)
T ss_pred             HHHcCcccccccCcHHHHHHHHHHHHhcChHHHHH-HHHHHHHHHHHHHHcCC-CCeEEeHHHHHHHHHHHHHHHHcCCC
Confidence            34567667888899999999999999999988886 88999999999999986 45799999999999999999999987


Q ss_pred             ChhhHHHHHHHHHHHhhccccccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCcchHHHHHHHccCCCCCC
Q 012417          209 PGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPL  288 (464)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~l  288 (464)
                      .......+.+.+..+...+..++.++|....++..++++.+.+++.+.+++++++..    ...|+++.+++.   +.++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~----~~~d~l~~ll~~---~~~l  260 (463)
T PLN02196        188 EVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNGS----SHNDLLGSFMGD---KEGL  260 (463)
T ss_pred             CchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCC----CcccHHHHHHhc---CCCC
Confidence            543323333333333322223344556555667788889999999999988766432    356899998854   3468


Q ss_pred             CHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHHHHhhhhcC
Q 012417          289 TDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRM  368 (464)
Q Consensus       289 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl  368 (464)
                      +++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+..+ .+..++++++.+||||+|||+|++|+
T Consensus       261 ~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~-~~~~~~~~~~~~l~yl~avi~EtlRl  339 (463)
T PLN02196        261 TDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKE-EGESLTWEDTKKMPLTSRVIQETLRV  339 (463)
T ss_pred             CHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccc-cCCCCCHHHHhcChHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999998875221 24568999999999999999999999


Q ss_pred             CCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccHHHH
Q 012417          369 GNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLCPGLDLA  448 (464)
Q Consensus       369 ~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~Fg~G~r~C~G~~la  448 (464)
                      +|+++...|.+.+|++++||.|||||.|+++.+.+|+||++|+||++|+||||+++.  .+..++|||.|+|.|+|+++|
T Consensus       340 ~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~--~~~~~lpFG~G~r~C~G~~~A  417 (463)
T PLN02196        340 ASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP--KPNTFMPFGNGTHSCPGNELA  417 (463)
T ss_pred             CCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC--CCCcccCcCCCCCCCchHHHH
Confidence            999998789999999999999999999999999999999999999999999999643  267899999999999999999


Q ss_pred             HHHHHHHHHHHHhhcC
Q 012417          449 RLEASIFLHHLVTQFR  464 (464)
Q Consensus       449 ~~~~~~~l~~ll~~f~  464 (464)
                      ++|++++++.|+++|+
T Consensus       418 ~~e~~~~la~ll~~f~  433 (463)
T PLN02196        418 KLEISVLIHHLTTKYR  433 (463)
T ss_pred             HHHHHHHHHHHHHhcE
Confidence            9999999999999996


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1e-73  Score=556.46  Aligned_cols=405  Identities=22%  Similarity=0.311  Sum_probs=326.3

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      .++||||+++|++|+++.+..     .++.++.+++++||++|++++++.++|+++||+++++++.+++..|+.+.....
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~  109 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQ-----LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIA  109 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCC-----cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccc
Confidence            567999999999999987632     466789999999999999999999999999999999999987777765533221


Q ss_pred             -HHhcC--CCceeecCChhHHHHHhh-hhccCChHhHHHHHHHHHHHHHHHHHHhhhc--CCCeeHHHHHHHHHHHHHHH
Q 012417          129 -TELMG--KSSILLINGGLQRRIHGL-IGSFFKSADLKAQITRDMEKYIHKSMENWMQ--DQPIYIQDESKNIAFQVLVK  202 (464)
Q Consensus       129 -~~~~g--~~~~~~~~g~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~vdl~~~~~~~~~~~i~~  202 (464)
                       ....+  .++++..+|+.|+++|++ +.+.|+...+.. +.+. .++++.+++.+.+  ++++|+.+.+..++.+++++
T Consensus       110 ~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~-~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~  187 (516)
T PLN02183        110 ISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAES-WASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYR  187 (516)
T ss_pred             hhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHH-HHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHh
Confidence             22222  346777889999999998 578899888775 6665 4678888888843  56899999999999999999


Q ss_pred             HHcCCCChhhHHHHHHHHHHHhhccc------cccc--cC-CCchHHHHHHHHHHHHHHHHHHHHHhhcCCCC------C
Q 012417          203 ALINLDPGEQMEILKKQFQEFISGLM------SLPI--NI-PGSQLYRSLQAKKKMARLIQEIIQSKRDGGMS------N  267 (464)
Q Consensus       203 ~~fG~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~------~  267 (464)
                      ++||.+.+....++.+.+..+...+.      .+++  ++ +....++..++.+.+.+++.+.++++.++...      +
T Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  267 (516)
T PLN02183        188 AAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDS  267 (516)
T ss_pred             HhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence            99998766543444444433322111      1111  11 22224456667777777777777765432111      1


Q ss_pred             CCCcchHHHHHHHccCC------------CCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 012417          268 INVPKDVIDVLMMNNAS------------DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIK  335 (464)
Q Consensus       268 ~~~~~~~~~~ll~~~~~------------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  335 (464)
                      ....+|+++.+++...+            +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       268 ~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~  347 (516)
T PLN02183        268 EEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELAD  347 (516)
T ss_pred             ccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            11246899999975321            235899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCChhhhcCChhHHHHHhhhhcCCCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCC
Q 012417          336 LKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ  415 (464)
Q Consensus       336 ~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  415 (464)
                      +++    .++.++.+++.+||||+|||+|+||++||++...|++.+|++++||.|||||.|.++.+.+||||++|+||++
T Consensus       348 v~~----~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~  423 (516)
T PLN02183        348 VVG----LNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDT  423 (516)
T ss_pred             HcC----CCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccc
Confidence            985    3456899999999999999999999999999878999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCC----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          416 FNPWRWQDNKDI----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       416 F~P~R~l~~~~~----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |+||||++++.+    +...|+|||.|+|.|+|++||++|+++++|.|+++|+
T Consensus       424 F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~  476 (516)
T PLN02183        424 FKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFT  476 (516)
T ss_pred             cCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeE
Confidence            999999975432    2458999999999999999999999999999999985


No 9  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.2e-73  Score=553.10  Aligned_cols=406  Identities=21%  Similarity=0.317  Sum_probs=333.2

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      .++||||.++|++||++.+..     +++.++.+++++||+||+++++++++|+++||+++++++.++...|..+.....
T Consensus        33 ~~~pPgp~~~P~iG~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~  107 (517)
T PLN02687         33 RPLPPGPRGWPVLGNLPQLGP-----KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSG  107 (517)
T ss_pred             CCCCccCCCCCccccHHhcCC-----chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccc
Confidence            467999999999999988743     688999999999999999999999999999999999999987777776544322


Q ss_pred             HHhc---CCCceeecCChhHHHHHhhhh-ccCChHhHHHHHHHHHHHHHHHHHHhhhc---CCCeeHHHHHHHHHHHHHH
Q 012417          129 TELM---GKSSILLINGGLQRRIHGLIG-SFFKSADLKAQITRDMEKYIHKSMENWMQ---DQPIYIQDESKNIAFQVLV  201 (464)
Q Consensus       129 ~~~~---g~~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~vdl~~~~~~~~~~~i~  201 (464)
                      ...+   +.++++..+|+.|+++|+++. +.|+...+.. +.+.+.+.+.++++.|.+   ++++|+.+.+..+++|+++
T Consensus       108 ~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~  186 (517)
T PLN02687        108 AEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDD-FRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALG  186 (517)
T ss_pred             hhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHH-hHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            2222   234566668999999999998 7899888876 899999999999988853   4679999999999999999


Q ss_pred             HHHcCCCChh-----hHHHHHHHHHHHhhccc------ccc--ccCCCc-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 012417          202 KALINLDPGE-----QMEILKKQFQEFISGLM------SLP--INIPGS-QLYRSLQAKKKMARLIQEIIQSKRDGGMSN  267 (464)
Q Consensus       202 ~~~fG~~~~~-----~~~~~~~~~~~~~~~~~------~~~--~~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (464)
                      .++||.++..     ....+.+.+..+.....      .++  .|++.. ..++..+..+.+.+++.+.++++++....+
T Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~  266 (517)
T PLN02687        187 RAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG  266 (517)
T ss_pred             HHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            9999987531     12334444333332111      111  122211 234455667778888889988877653221


Q ss_pred             CCCcchHHHHHHHccCC------CCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 012417          268 INVPKDVIDVLMMNNAS------DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA  341 (464)
Q Consensus       268 ~~~~~~~~~~ll~~~~~------~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  341 (464)
                      .....|+++.+++..++      +..++++++++++..+++||+|||+++++|++++|++||++|+|+++|++++.+   
T Consensus       267 ~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~---  343 (517)
T PLN02687        267 SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVG---  343 (517)
T ss_pred             CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcC---
Confidence            12356999999986432      345999999999999999999999999999999999999999999999999875   


Q ss_pred             hcCCCCChhhhcCChhHHHHHhhhhcCCCCcc-CcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCC
Q 012417          342 QLGEPLSWSDYLSLPFTQNVITETLRMGNIII-GVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR  420 (464)
Q Consensus       342 ~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  420 (464)
                       .++.++.+++.+||||+|||+|++|++||++ .++|.+.+|++++||.||+||.|.++.+.+||||++|+||++|+|||
T Consensus       344 -~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeR  422 (517)
T PLN02687        344 -RDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDR  422 (517)
T ss_pred             -CCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchh
Confidence             3567899999999999999999999999999 47899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC-------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          421 WQDNKDI-------SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       421 ~l~~~~~-------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |++++..       .+..|+|||.|+|.|+|++||.+|+++++|+||++|+
T Consensus       423 fl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~  473 (517)
T PLN02687        423 FLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFD  473 (517)
T ss_pred             cCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcc
Confidence            9975321       2457999999999999999999999999999999996


No 10 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.3e-72  Score=548.69  Aligned_cols=414  Identities=33%  Similarity=0.616  Sum_probs=343.2

Q ss_pred             CCCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCC--eeEeecCCccEEEecChHHHHHHHhcCCccccccch
Q 012417           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGK--VFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP  125 (464)
Q Consensus        48 ~~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~--i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~  125 (464)
                      ..++||||+++|++|+++.+......++++.++.+++++||+  ||++++++++.|+++||+.+++++.++ +.|..+.+
T Consensus        40 ~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~  118 (490)
T PLN02302         40 QPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWP  118 (490)
T ss_pred             CCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCc
Confidence            467899999999999999886543345789999999999997  799999999999999999999999876 55655544


Q ss_pred             hHHHHhcCCCceeecCChhHHHHHhhhhccCC-hHhHHHHHHHHHHHHHHHHHHhhhcCCCeeHHHHHHHHHHHHHHHHH
Q 012417          126 KSLTELMGKSSILLINGGLQRRIHGLIGSFFK-SADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKAL  204 (464)
Q Consensus       126 ~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~  204 (464)
                      ......+|..++...+|+.|+++|+.+.+.|+ ...+.. +.+.+.+.++++++.+..++.+|+.+.+..++++++++++
T Consensus       119 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~-~~~~i~~~v~~~~~~~~~~~~v~~~~~~~~~~~~vi~~~~  197 (490)
T PLN02302        119 ESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALST-YIPYIEENVKSCLEKWSKMGEIEFLTELRKLTFKIIMYIF  197 (490)
T ss_pred             hhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHH-HHHHHHHHHHHHHHHhcCCCCEehHHHHHHHHHHHHHHHH
Confidence            33334566556667799999999999999996 456665 8899999999999998777789999999999999999999


Q ss_pred             cCCCChhhHHHHHHHHHHHhhccccccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-CCCcchHHHHHHHccC
Q 012417          205 INLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSN-INVPKDVIDVLMMNNA  283 (464)
Q Consensus       205 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~~ll~~~~  283 (464)
                      ||.+.......+.+.+..+...+......+|...+.+..++.+++.+++.+.++++++....+ .....|+++.+++..+
T Consensus       198 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~  277 (490)
T PLN02302        198 LSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAED  277 (490)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhc
Confidence            999876544444443333332222233344554455666777888888988888876543211 1135789999998743


Q ss_pred             -CCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHHHH
Q 012417          284 -SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVI  362 (464)
Q Consensus       284 -~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i  362 (464)
                       ++..++++++++.+..+++||+|||+++++|++++|++||++|+|+++|++++.+........++++++.+||||+|||
T Consensus       278 ~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i  357 (490)
T PLN02302        278 ENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVI  357 (490)
T ss_pred             cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHH
Confidence             3446899999999999999999999999999999999999999999999999876321112237999999999999999


Q ss_pred             hhhhcCCCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCC
Q 012417          363 TETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLC  442 (464)
Q Consensus       363 ~E~lRl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~Fg~G~r~C  442 (464)
                      +|++|++|+++...|.+.+|++++||.||||+.|.++.+.+||||++|+||++|+||||++.+. .+..++|||.|+|.|
T Consensus       358 ~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~-~~~~~~pFG~G~r~C  436 (490)
T PLN02302        358 DETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTP-KAGTFLPFGLGSRLC  436 (490)
T ss_pred             HHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCC-CCCCccCCCCCCcCC
Confidence            9999999999977899999999999999999999999999999999999999999999997543 367899999999999


Q ss_pred             ccHHHHHHHHHHHHHHHHhhcC
Q 012417          443 PGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       443 ~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      +|++||.+|++++++.|+++|+
T Consensus       437 ~G~~lA~~e~~~~la~ll~~f~  458 (490)
T PLN02302        437 PGNDLAKLEISIFLHHFLLGYR  458 (490)
T ss_pred             CcHHHHHHHHHHHHHHHHhcCe
Confidence            9999999999999999999996


No 11 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.8e-72  Score=538.28  Aligned_cols=411  Identities=42%  Similarity=0.798  Sum_probs=334.6

Q ss_pred             CCCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhH
Q 012417           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (464)
Q Consensus        48 ~~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~  127 (464)
                      ..++||||.++|++||++.+......++++.++.+++++||++|+++++++++|+|+||+++++++.++...|..+....
T Consensus        28 ~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~  107 (472)
T PLN02987         28 RMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGS  107 (472)
T ss_pred             CCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHH
Confidence            35689999999999999987532112468899999999999999999999999999999999999999877786555445


Q ss_pred             HHHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhcCCCeeHHHHHHHHHHHHHHHHHcCC
Q 012417          128 LTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINL  207 (464)
Q Consensus       128 ~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~  207 (464)
                      ....+|++++++.+|+.|+++|+++.+.++...+...+...+.+.+...++.|.  +++++.+.+.+++++++++++||.
T Consensus       108 ~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~t~~vi~~~~fg~  185 (472)
T PLN02987        108 ISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS--SRVLLMEEAKKITFELTVKQLMSF  185 (472)
T ss_pred             HHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc--cceehHHHHHHHHHHHHHHHHcCC
Confidence            557777668888899999999999876444444444232335555566666664  479999999999999999999998


Q ss_pred             CChhhHHHHHHHHHHHhhccccccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCcchHHHHHHHccCCCCC
Q 012417          208 DPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQP  287 (464)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  287 (464)
                      +.++..+.+.+.+......+...+..+....+++..++++++.+++.+.++++++....+.....|+++.+++..   .+
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~---~~  262 (472)
T PLN02987        186 DPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASD---DG  262 (472)
T ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcC---CC
Confidence            765443444444444433332222222234467788889999999999999887643222113568999999763   25


Q ss_pred             CCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHHHHhhhhc
Q 012417          288 LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLR  367 (464)
Q Consensus       288 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lR  367 (464)
                      ++++++++++.++++||+|||+++++|++++|++||++|+++++|++++.+..+ .+..++++++.+||||+|||+|++|
T Consensus       263 ~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~-~~~~~~~~~l~~lpyl~a~i~EtLR  341 (472)
T PLN02987        263 FSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKS-DSYSLEWSDYKSMPFTQCVVNETLR  341 (472)
T ss_pred             CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccC-CCCCCCHHHHhcChHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999875221 2346899999999999999999999


Q ss_pred             CCCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCCC--CCCCccccCCCCCCCccH
Q 012417          368 MGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDI--SNSSFTPFGGGQRLCPGL  445 (464)
Q Consensus       368 l~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~--~~~~~~~Fg~G~r~C~G~  445 (464)
                      ++|+++.+.|++.+|++++||.||+||.|+++.+.+|+||++|+||++|+||||++++..  ....++|||+|+|.|||+
T Consensus       342 l~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G~  421 (472)
T PLN02987        342 VANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPGY  421 (472)
T ss_pred             ccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCcH
Confidence            999999888999999999999999999999999999999999999999999999975443  246899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcC
Q 012417          446 DLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       446 ~la~~~~~~~l~~ll~~f~  464 (464)
                      +||..|++++++.||++|+
T Consensus       422 ~lA~~e~~~~la~ll~~f~  440 (472)
T PLN02987        422 ELARVALSVFLHRLVTRFS  440 (472)
T ss_pred             HHHHHHHHHHHHHHHhceE
Confidence            9999999999999999985


No 12 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.8e-72  Score=549.21  Aligned_cols=408  Identities=21%  Similarity=0.272  Sum_probs=325.8

Q ss_pred             CCCCCCCCCCccccchHHHhhhhc--------------cCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHh
Q 012417           49 GQLPLGTLGWPIVGESLEFISCAL--------------TDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQ  114 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~--------------~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~  114 (464)
                      ++-||||+++|++||++.+.....              ..+....+.+|+++||++|++|+++.+.|+++||+.+++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            334899999999999988753100              123445678999999999999999999999999999999998


Q ss_pred             cCCccccccch---hHHHHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhc----C-CCe
Q 012417          115 SDAKAFVPFYP---KSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQ----D-QPI  186 (464)
Q Consensus       115 ~~~~~f~~~~~---~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~v  186 (464)
                      ++.. +..+..   ......+| .++++.+|+.|+++|+++.+.|+..++.. +.+.+.+.++++++.+.+    + .++
T Consensus       121 ~~~~-~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~v  197 (516)
T PLN02290        121 KYNT-VTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLKG-YAGHMVECTKQMLQSLQKAVESGQTEV  197 (516)
T ss_pred             cCCC-CCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence            8733 333321   11233456 47888899999999999999999998876 889999999999998863    2 479


Q ss_pred             eHHHHHHHHHHHHHHHHHcCCCChhhH--HHHHHHHHHHhhcc---cccc--ccCCCchHHHHHHHHHHHHHHHHHHHHH
Q 012417          187 YIQDESKNIAFQVLVKALINLDPGEQM--EILKKQFQEFISGL---MSLP--INIPGSQLYRSLQAKKKMARLIQEIIQS  259 (464)
Q Consensus       187 dl~~~~~~~~~~~i~~~~fG~~~~~~~--~~~~~~~~~~~~~~---~~~~--~~~p~~~~~~~~~~~~~l~~~~~~~i~~  259 (464)
                      |+.+.+..+++|++++++||.+.....  ......+.......   ..++  .++|....++..+..+.+.+++.+.+++
T Consensus       198 d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~  277 (516)
T PLN02290        198 EIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQS  277 (516)
T ss_pred             EhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998765321  11111111111111   0111  1233322334455667788888888887


Q ss_pred             hhcCCCCC--CCCcchHHHHHHHccC----CCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 012417          260 KRDGGMSN--INVPKDVIDVLMMNNA----SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDEN  333 (464)
Q Consensus       260 ~~~~~~~~--~~~~~~~~~~ll~~~~----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  333 (464)
                      +++....+  .....|+++.+++...    ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|+
T Consensus       278 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei  357 (516)
T PLN02290        278 RRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEV  357 (516)
T ss_pred             HHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            76532111  1134689999997632    22347899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCChhhhcCChhHHHHHhhhhcCCCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCC-CC
Q 012417          334 IKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY-EW  412 (464)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~  412 (464)
                      +++++     +..++++++++||||+|||+||+|++||++.++|.+.+|++++||.|||||.|.++.+++||||++| +|
T Consensus       358 ~~v~~-----~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~d  432 (516)
T PLN02290        358 AEVCG-----GETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKD  432 (516)
T ss_pred             HHHhC-----CCCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCC
Confidence            99986     2378999999999999999999999999998899999999999999999999999999999999999 89


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          413 PYQFNPWRWQDNKDISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       413 p~~F~P~R~l~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |++|+||||++++......|+|||.|+|.|+|++||++|++++++.||++|+
T Consensus       433 P~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~  484 (516)
T PLN02290        433 ANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFS  484 (516)
T ss_pred             hhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhce
Confidence            9999999999643223467999999999999999999999999999999996


No 13 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=3.9e-72  Score=545.01  Aligned_cols=406  Identities=22%  Similarity=0.307  Sum_probs=328.0

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      .+.||||.++|++||++.+..    .+++.++.+++++||++|++++++.++|+++|||++++++.++...|..+.....
T Consensus        27 ~~~pPgp~~~P~iG~~~~~~~----~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~  102 (499)
T PLN03234         27 LRLPPGPKGLPIIGNLHQMEK----FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKG  102 (499)
T ss_pred             CCCCcCCCCCCeeccHHhcCC----CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            567999999999999988743    2678899999999999999999999999999999999999988777765543211


Q ss_pred             H---HhcCCCceeecCChhHHHHHhhh-hccCChHhHHHHHHHHHHHHHHHHHHhhh----cCCCeeHHHHHHHHHHHHH
Q 012417          129 T---ELMGKSSILLINGGLQRRIHGLI-GSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVL  200 (464)
Q Consensus       129 ~---~~~g~~~~~~~~g~~~~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~~i  200 (464)
                      .   ...+....+...++.|+++|+.+ .+.|+...+.. +.+.+.+.++++++.|.    +++++|+.+.+..+++|++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~-~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi  181 (499)
T PLN03234        103 QQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVAS-FRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVV  181 (499)
T ss_pred             hhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHH-hHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHH
Confidence            1   11222112334678999999974 68899888876 88999999999998885    3578999999999999999


Q ss_pred             HHHHcCCCChhhH---HHHHHHHHHHhhccc--cccccCCC--------chHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 012417          201 VKALINLDPGEQM---EILKKQFQEFISGLM--SLPINIPG--------SQLYRSLQAKKKMARLIQEIIQSKRDGGMSN  267 (464)
Q Consensus       201 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~p~--------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (464)
                      ++++||.+.+...   .++.+.+......+.  .....+|.        ...++..++.+++.+++.+.++++.+....+
T Consensus       182 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (499)
T PLN03234        182 CRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK  261 (499)
T ss_pred             HHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            9999998776432   223332222221110  00011111        1235667788889999999998876532211


Q ss_pred             CCCcchHHHHHHHccCC---CCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcC
Q 012417          268 INVPKDVIDVLMMNNAS---DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLG  344 (464)
Q Consensus       268 ~~~~~~~~~~ll~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  344 (464)
                       ....|+++.+++..++   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++    +.
T Consensus       262 -~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~----~~  336 (499)
T PLN03234        262 -QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIG----DK  336 (499)
T ss_pred             -CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CC
Confidence             1356899998876432   235899999999999999999999999999999999999999999999999975    44


Q ss_pred             CCCChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccccCeEeCCCCEEecccccccCCCCCC-CCCCCCCCCCCC
Q 012417          345 EPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPWRWQ  422 (464)
Q Consensus       345 ~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l  422 (464)
                      +.++++++.+||||+|||+|++|++||++. +.|.+.+|++++||.|||||.|.++.+.+||||++| +||++|+||||+
T Consensus       337 ~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l  416 (499)
T PLN03234        337 GYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFM  416 (499)
T ss_pred             CCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhc
Confidence            668999999999999999999999999996 479999999999999999999999999999999999 899999999999


Q ss_pred             CCCCC-----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          423 DNKDI-----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       423 ~~~~~-----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      +++..     .+..++|||.|+|.|+|+++|++|+++++|.|+++|+
T Consensus       417 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~  463 (499)
T PLN03234        417 KEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFD  463 (499)
T ss_pred             CCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHhee
Confidence            75432     2568999999999999999999999999999999986


No 14 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.6e-71  Score=541.32  Aligned_cols=410  Identities=21%  Similarity=0.312  Sum_probs=327.9

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      .++||||+++|++||++.+...  ..+++.++.+++++||++|++++++.+.|+++||+++++++.++...|+.+.....
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~--~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNS--SADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccc--cccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            5689999999999999866421  13588999999999999999999999999999999999999988777876544333


Q ss_pred             HHhcCC-Cceee--cCChhHHHHHh-hhhccCChHhHHHHHHHHHHHHHHHHHHhhhc----CCCeeHHHHHHHHHHHHH
Q 012417          129 TELMGK-SSILL--INGGLQRRIHG-LIGSFFKSADLKAQITRDMEKYIHKSMENWMQ----DQPIYIQDESKNIAFQVL  200 (464)
Q Consensus       129 ~~~~g~-~~~~~--~~g~~~~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~vdl~~~~~~~~~~~i  200 (464)
                      ...+|. .+++.  .+|+.|+++|| ++.+.|+...+++ +.+.+.+.++++++.|.+    ++.+|+.+.+..++.+++
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii  190 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRL-FAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL  190 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence            344453 23443  57999999886 7999999998886 899999999999888864    246899999999999999


Q ss_pred             HHHHcCCCChhhH-HHHHHHHHHHh---hccccccccCCC-------chHHHHHHHHHHHHHHHHHHHHHhhcCCC---C
Q 012417          201 VKALINLDPGEQM-EILKKQFQEFI---SGLMSLPINIPG-------SQLYRSLQAKKKMARLIQEIIQSKRDGGM---S  266 (464)
Q Consensus       201 ~~~~fG~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~~~~~---~  266 (464)
                      +.++||.++++.. ..+...+....   .....+...+|.       ..+.+..++.+++.+++.+.++++++...   .
T Consensus       191 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  270 (519)
T PLN00168        191 VLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQ  270 (519)
T ss_pred             HHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            9999999876432 22222222211   111111111221       12334456677888888888887654320   0


Q ss_pred             -C--C----CCcchHHHHHHHccC---CCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 012417          267 -N--I----NVPKDVIDVLMMNNA---SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKL  336 (464)
Q Consensus       267 -~--~----~~~~~~~~~ll~~~~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  336 (464)
                       +  .    ....|+++.|++...   ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++
T Consensus       271 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v  350 (519)
T PLN00168        271 GGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAK  350 (519)
T ss_pred             cCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence             0  0    014589999997642   23469999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCC
Q 012417          337 KELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQ  415 (464)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~  415 (464)
                      ++   ...+.++.+++.+||||+|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.+.+||||++|+||++
T Consensus       351 ~~---~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~  427 (519)
T PLN00168        351 TG---DDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPME  427 (519)
T ss_pred             hC---CCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccc
Confidence            75   123568999999999999999999999999984 58999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC-------C-CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          416 FNPWRWQDNKD-------I-SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       416 F~P~R~l~~~~-------~-~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |+||||++++.       . ++..|+|||.|+|.|||++||.+|++++++.||++|+
T Consensus       428 F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~  484 (519)
T PLN00168        428 FVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFE  484 (519)
T ss_pred             cCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHcc
Confidence            99999997422       1 2457999999999999999999999999999999996


No 15 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2.7e-72  Score=543.78  Aligned_cols=401  Identities=21%  Similarity=0.294  Sum_probs=323.5

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhH-
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS-  127 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~-  127 (464)
                      .+.+|||+++|++||++.+..     +++.++.+++++||+||+++++++++|+++||+.+++++.++...|..+.... 
T Consensus        28 ~~~~pgp~~~p~~G~~~~~~~-----~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~  102 (482)
T PTZ00404         28 KNELKGPIPIPILGNLHQLGN-----LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS  102 (482)
T ss_pred             CCCCCCCCCCCeeccHhhhcc-----cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence            556789999999999988743     68899999999999999999999999999999999999987655565432211 


Q ss_pred             H-HHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhh----cCCCeeHHHHHHHHHHHHHHH
Q 012417          128 L-TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVLVK  202 (464)
Q Consensus       128 ~-~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~~i~~  202 (464)
                      . ...+| .++++.+|+.|+++|+++.+.|+...+.. +.+.+.+.++++++.|.    +++++|+.+.+..+++|+++.
T Consensus       103 ~~~~~~~-~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  180 (482)
T PTZ00404        103 IKHGTFY-HGIVTSSGEYWKRNREIVGKAMRKTNLKH-IYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFK  180 (482)
T ss_pred             eeeeccC-CceeccChHHHHHHHHHHHHHHhhhcccc-HHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHH
Confidence            1 12233 57888899999999999999999988876 88999999999998874    256799999999999999999


Q ss_pred             HHcCCCChhh-------HHHHHHHHHHHhhcccc--c--cccCCCch----HHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 012417          203 ALINLDPGEQ-------MEILKKQFQEFISGLMS--L--PINIPGSQ----LYRSLQAKKKMARLIQEIIQSKRDGGMSN  267 (464)
Q Consensus       203 ~~fG~~~~~~-------~~~~~~~~~~~~~~~~~--~--~~~~p~~~----~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (464)
                      ++||.+.+..       ...+.+.+..+......  +  ...+..+.    .....+..+.+.+++.+.++++++....+
T Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  260 (482)
T PTZ00404        181 YIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPE  260 (482)
T ss_pred             HHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence            9999876431       12333333333222110  0  00011111    12233456677777777777665542221


Q ss_pred             CCCcchHHHHHHHccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 012417          268 INVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPL  347 (464)
Q Consensus       268 ~~~~~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  347 (464)
                        ...|+++.++++..+....+.+++++++..+++||+|||+++++|++++|++||++|+|+++|++++++    +...+
T Consensus       261 --~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~----~~~~~  334 (482)
T PTZ00404        261 --VPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVN----GRNKV  334 (482)
T ss_pred             --CcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhc----CCCCC
Confidence              356899999987432222233458899999999999999999999999999999999999999999986    34568


Q ss_pred             ChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccc-cCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 012417          348 SWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEI-KGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNK  425 (464)
Q Consensus       348 ~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  425 (464)
                      +++++.+||||+|||+|+||+|||++. ++|.+.+|+++ +||.|||||.|.++.+++||||++|+||++|+||||++..
T Consensus       335 ~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~  414 (482)
T PTZ00404        335 LLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD  414 (482)
T ss_pred             CccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC
Confidence            999999999999999999999999994 78999999999 9999999999999999999999999999999999999753


Q ss_pred             CCCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          426 DISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       426 ~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      .  +..|+|||.|+|.|||++||++|++++++.||++|+
T Consensus       415 ~--~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~  451 (482)
T PTZ00404        415 S--NDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFK  451 (482)
T ss_pred             C--CCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcE
Confidence            3  679999999999999999999999999999999995


No 16 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=2.9e-71  Score=536.08  Aligned_cols=406  Identities=18%  Similarity=0.288  Sum_probs=326.4

Q ss_pred             CCCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhH
Q 012417           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (464)
Q Consensus        48 ~~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~  127 (464)
                      ..++||||+++|++|+++.+.     .+++.++.+++++||+||++++++++.|+++||+++++++.+....|+.+....
T Consensus        29 ~~~~pPgp~~~Pl~G~l~~~~-----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~  103 (504)
T PLN00110         29 SRKLPPGPRGWPLLGALPLLG-----NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNA  103 (504)
T ss_pred             cCCCcccCCCCCeeechhhcC-----CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence            366899999999999987763     258899999999999999999999999999999999999998777777654322


Q ss_pred             --HHHhcC-CCceeecCChhHHHHHhhhhc-cCChHhHHHHHHHHHHHHHHHHHHhhh----cCCCeeHHHHHHHHHHHH
Q 012417          128 --LTELMG-KSSILLINGGLQRRIHGLIGS-FFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQV  199 (464)
Q Consensus       128 --~~~~~g-~~~~~~~~g~~~~~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~~  199 (464)
                        .....| .+++++.+|+.|+++|+.+.+ .|+...++. +.+.+.+.+.++++.+.    +++++|+.+++..+++|+
T Consensus       104 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~v  182 (504)
T PLN00110        104 GATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALED-WSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANM  182 (504)
T ss_pred             chhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHH-hhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHH
Confidence              112233 346677789999999999985 688877776 77777777777766653    356899999999999999


Q ss_pred             HHHHHcCCCCh----hhHHHHHHHHHHHhhcc--c----ccc--ccCCCch-HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 012417          200 LVKALINLDPG----EQMEILKKQFQEFISGL--M----SLP--INIPGSQ-LYRSLQAKKKMARLIQEIIQSKRDGGMS  266 (464)
Q Consensus       200 i~~~~fG~~~~----~~~~~~~~~~~~~~~~~--~----~~~--~~~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~  266 (464)
                      ++.++||.+..    ....++.+.+.......  .    .++  .|++... .++..+..+.+.+++.+.++++++....
T Consensus       183 i~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  262 (504)
T PLN00110        183 IGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHE  262 (504)
T ss_pred             HHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99999998651    12233444444332211  1    111  1122111 2334455677778888888776653321


Q ss_pred             CCCCcchHHHHHHHccC--CCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcC
Q 012417          267 NINVPKDVIDVLMMNNA--SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLG  344 (464)
Q Consensus       267 ~~~~~~~~~~~ll~~~~--~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  344 (464)
                      + ....|+++.+++..+  ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+    .+
T Consensus       263 ~-~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~  337 (504)
T PLN00110        263 R-KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIG----RN  337 (504)
T ss_pred             c-ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CC
Confidence            1 124689999997643  3456999999999999999999999999999999999999999999999999875    34


Q ss_pred             CCCChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCC
Q 012417          345 EPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQD  423 (464)
Q Consensus       345 ~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  423 (464)
                      ..++++++++||||+|||+||+|++|+++. ++|.+.+|++++||.|||||.|.++.+.+|+||++|+||++|+||||++
T Consensus       338 ~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~  417 (504)
T PLN00110        338 RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLS  417 (504)
T ss_pred             CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccC
Confidence            568999999999999999999999999995 7899999999999999999999999999999999999999999999997


Q ss_pred             CCCC--C----CCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          424 NKDI--S----NSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       424 ~~~~--~----~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      ++..  +    ...++|||.|+|.|+|++||.+|+++++|.|+++|+
T Consensus       418 ~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~  464 (504)
T PLN00110        418 EKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFD  464 (504)
T ss_pred             CCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhce
Confidence            5432  1    247999999999999999999999999999999996


No 17 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=3.7e-71  Score=538.68  Aligned_cols=406  Identities=19%  Similarity=0.259  Sum_probs=313.7

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      .+.||||+++|++|+++.+.+    ...+..+.+++++||+||++++++++.|+++||+.+++++.+++..|..+.....
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~----~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~  104 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGD----DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVV  104 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCC----CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcch
Confidence            456899999999999987643    2357899999999999999999999999999999999999887666765433222


Q ss_pred             -HHhcC--CCceeecCChhHHHHHhhhh-ccCChHhHHHHHHHHHHHHHHHHHHhhhc-----CCCeeHHHHHHHHHHHH
Q 012417          129 -TELMG--KSSILLINGGLQRRIHGLIG-SFFKSADLKAQITRDMEKYIHKSMENWMQ-----DQPIYIQDESKNIAFQV  199 (464)
Q Consensus       129 -~~~~g--~~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~vdl~~~~~~~~~~~  199 (464)
                       ..+.|  .++++..+|+.|+++|+.+. +.|+...+.. +.+.+++.++++++.+.+     ++.+|+.+.+..+++|+
T Consensus       105 ~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dv  183 (503)
T PLN02394        105 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQ-YRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNI  183 (503)
T ss_pred             HhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHH-hhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHH
Confidence             22333  23577778999999999986 8898887765 778888888888887753     24689999999999999


Q ss_pred             HHHHHcCCCChhhHH----HHHHHHHHH---hhccc-cccccCCC--c---hHHH-HHHHHHHHHH-HHHHHHHHhhcCC
Q 012417          200 LVKALINLDPGEQME----ILKKQFQEF---ISGLM-SLPINIPG--S---QLYR-SLQAKKKMAR-LIQEIIQSKRDGG  264 (464)
Q Consensus       200 i~~~~fG~~~~~~~~----~~~~~~~~~---~~~~~-~~~~~~p~--~---~~~~-~~~~~~~l~~-~~~~~i~~~~~~~  264 (464)
                      +++++||.+++...+    .+.......   ...+. .+...+|.  +   .+.+ .......... +....++++++..
T Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        184 MYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987754211    111111111   11100 00011111  0   1111 1111122222 2233455544321


Q ss_pred             C---CCCCCcchHHHHHHHccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 012417          265 M---SNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA  341 (464)
Q Consensus       265 ~---~~~~~~~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  341 (464)
                      .   .+.+..+|+++.+++...+ +.++++++...+.++++||+|||+++++|++++|++||++|+|+++|++++.+   
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~---  339 (503)
T PLN02394        264 SAKGMDKEGLKCAIDHILEAQKK-GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLG---  339 (503)
T ss_pred             hhccCCcchhhhHHHHHHhcccc-CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC---
Confidence            0   0111346899999987543 35899999999999999999999999999999999999999999999999986   


Q ss_pred             hcCCCCChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCC
Q 012417          342 QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR  420 (464)
Q Consensus       342 ~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  420 (464)
                       .++.++++++.+||||+|||+|++|++|+++. .+|.+.+|++++||.||+||.|.++.+.+||||++|+||++|+|||
T Consensus       340 -~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeR  418 (503)
T PLN02394        340 -PGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPER  418 (503)
T ss_pred             -CCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccc
Confidence             34568999999999999999999999999995 4799999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC-----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          421 WQDNKDI-----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       421 ~l~~~~~-----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |+++++.     ....++|||.|+|.|+|++||++|+++++|.|+++|+
T Consensus       419 wl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~  467 (503)
T PLN02394        419 FLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFE  467 (503)
T ss_pred             cCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHce
Confidence            9975432     2468999999999999999999999999999999996


No 18 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=3.4e-72  Score=537.84  Aligned_cols=407  Identities=26%  Similarity=0.424  Sum_probs=325.5

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCc--cccccchh
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAK--AFVPFYPK  126 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~--~f~~~~~~  126 (464)
                      .+.||||.++|++|+++.+....  .++..++.++..+||++|+.|++|.++|+++||+.+++|+.++..  .+...++.
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~  111 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPL--EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPE  111 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcch--hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHH
Confidence            56789999999999999997644  478889999999999999999999999999999999999964433  23344555


Q ss_pred             HHHHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhh--cCCC-eeHHHHHHHHHHHHHHHH
Q 012417          127 SLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM--QDQP-IYIQDESKNIAFQVLVKA  203 (464)
Q Consensus       127 ~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-vdl~~~~~~~~~~~i~~~  203 (464)
                      .+.+++|. |+++.+|+.|+++|+++.++|+...+++ +...+.+....+...+.  ..+. +|+.+.+.++++|+++.+
T Consensus       112 ~~~~~lG~-gll~~~g~~W~~~Rk~~~~~f~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  112 SLKPWLGD-GLLFSDGEKWHKHRKLLTPAFHFEILKS-FVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHHHHhcC-ccccCCchHHHHHHhhccHhhhHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            77899997 8888889999999999999999999987 55666566555444443  2233 999999999999999999


Q ss_pred             HcCCCC-hhh---HHHHHHHHHHHhhc---ccccc---ccCCCc-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCC----C
Q 012417          204 LINLDP-GEQ---MEILKKQFQEFISG---LMSLP---INIPGS-QLYRSLQAKKKMARLIQEIIQSKRDGGMSN----I  268 (464)
Q Consensus       204 ~fG~~~-~~~---~~~~~~~~~~~~~~---~~~~~---~~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~----~  268 (464)
                      +||... +.+   ..++...+......   ....|   .++... ..++..++.+.+.+++++.|++++++...+    .
T Consensus       190 ~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~  269 (497)
T KOG0157|consen  190 AMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEE  269 (497)
T ss_pred             hcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            999322 212   22333343322221   11122   111111 345667789999999999999888632111    1


Q ss_pred             CCcchHHHHHHHccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 012417          269 NVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLS  348 (464)
Q Consensus       269 ~~~~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  348 (464)
                      ....++++.+.... + ..++++++++++.++++||+|||+++++|++++|+.||++|+|+++|+.++++..   +...+
T Consensus       270 ~~~~d~L~~~~~~~-~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~---~~~~~  344 (497)
T KOG0157|consen  270 KKRLDFLDTLLLEE-D-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNR---DDKWE  344 (497)
T ss_pred             chhhhHHHHHHHhc-c-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC---CCCCC
Confidence            24568888643332 2 6799999999999999999999999999999999999999999999999998622   11122


Q ss_pred             hhhhcCChhHHHHHhhhhcCCCCccCcccccccCcccc-CeEeCCCCEEecccccccCCCCCCC-CCCCCCCCCCCCCCC
Q 012417          349 WSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIK-GYLIPKGWCFFAYFRSVHLDESNYE-WPYQFNPWRWQDNKD  426 (464)
Q Consensus       349 ~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~-g~~ip~G~~v~~~~~~~~~d~~~~~-~p~~F~P~R~l~~~~  426 (464)
                      ..+.++|+||++||+||||||||+|.+.|.+.+|++++ ||.||||+.|.++++.+|||+.+|+ ||++|+||||++++.
T Consensus       345 ~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~  424 (497)
T KOG0157|consen  345 VEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEE  424 (497)
T ss_pred             hhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCC
Confidence            22333699999999999999999999999999999995 8999999999999999999999995 999999999996543


Q ss_pred             C---CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          427 I---SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       427 ~---~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      .   ++.+|+|||+|+|.|+|++||++|+|+++++||++|+
T Consensus       425 ~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~  465 (497)
T KOG0157|consen  425 KAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFR  465 (497)
T ss_pred             cCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheE
Confidence            3   4789999999999999999999999999999999995


No 19 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=7.4e-71  Score=537.58  Aligned_cols=407  Identities=19%  Similarity=0.248  Sum_probs=325.4

Q ss_pred             CCCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhH
Q 012417           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (464)
Q Consensus        48 ~~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~  127 (464)
                      ..+.||||+++|++||++.+..     +++.++.+++++||++|++++++++.|+++||+++++++.++...|+.+....
T Consensus        30 ~~~~ppgp~~~pl~G~~~~~~~-----~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~  104 (514)
T PLN03112         30 SLRLPPGPPRWPIVGNLLQLGP-----LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTL  104 (514)
T ss_pred             CCCCccCCCCCCeeeeHHhcCC-----chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcc
Confidence            3567999999999999988742     68899999999999999999999999999999999999988777777544321


Q ss_pred             H--HHhcCC-CceeecCChhHHHHHhhhh-ccCChHhHHHHHHHHHHHHHHHHHHhhh----cCCCeeHHHHHHHHHHHH
Q 012417          128 L--TELMGK-SSILLINGGLQRRIHGLIG-SFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQV  199 (464)
Q Consensus       128 ~--~~~~g~-~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~~  199 (464)
                      .  ...+|. .+++..+|+.|+++|+++. +.|+..++.. +.+.+.+.++++++.+.    +++++|+.+.+..+++++
T Consensus       105 ~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~-~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~v  183 (514)
T PLN03112        105 AAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLES-FAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNN  183 (514)
T ss_pred             cceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHH-hhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHH
Confidence            1  122333 2455678999999999954 6799888876 77888888888877643    356799999999999999


Q ss_pred             HHHHHcCCCChh-------hHHHHHHHHHHHhhcc--c----cccc--cC-CCchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 012417          200 LVKALINLDPGE-------QMEILKKQFQEFISGL--M----SLPI--NI-PGSQLYRSLQAKKKMARLIQEIIQSKRDG  263 (464)
Q Consensus       200 i~~~~fG~~~~~-------~~~~~~~~~~~~~~~~--~----~~~~--~~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~  263 (464)
                      ++.++||.+...       ....+.+.+..+....  .    .++.  ++ +....++..++.+.+.+++.+.++++++.
T Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  263 (514)
T PLN03112        184 VTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRA  263 (514)
T ss_pred             HHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987531       1223333333332211  0    1111  11 21223455566777888888888776553


Q ss_pred             CCCC--CCCcchHHHHHHHccCC--CCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 012417          264 GMSN--INVPKDVIDVLMMNNAS--DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKEL  339 (464)
Q Consensus       264 ~~~~--~~~~~~~~~~ll~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  339 (464)
                      ...+  .....|+++.++++..+  +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+ 
T Consensus       264 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~-  342 (514)
T PLN03112        264 RSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVG-  342 (514)
T ss_pred             hcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcC-
Confidence            2111  11346899999986432  224899999999999999999999999999999999999999999999999876 


Q ss_pred             HhhcCCCCChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCC
Q 012417          340 KAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNP  418 (464)
Q Consensus       340 ~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  418 (464)
                         .++.++.+++.+||||+|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.+.+||||++|+||++|+|
T Consensus       343 ---~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~P  419 (514)
T PLN03112        343 ---RNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRP  419 (514)
T ss_pred             ---CCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCC
Confidence               34568999999999999999999999999994 68999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC-------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          419 WRWQDNKDI-------SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       419 ~R~l~~~~~-------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |||+.+++.       ....++|||.|+|.|||++||.+|+++++++||++|+
T Consensus       420 eRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~  472 (514)
T PLN03112        420 ERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFD  472 (514)
T ss_pred             cccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhee
Confidence            998754211       1357999999999999999999999999999999986


No 20 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=9.5e-71  Score=534.29  Aligned_cols=408  Identities=22%  Similarity=0.332  Sum_probs=322.0

Q ss_pred             CCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH
Q 012417           49 GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL  128 (464)
Q Consensus        49 ~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~  128 (464)
                      .++||||+++|++||++.+..    .+++.++.+++++||+||++++++.++|+++||+.+++++.+++..|....+...
T Consensus        28 ~~~ppgp~~~p~~G~l~~l~~----~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         28 YKLPPGPSPLPVIGNLLQLQK----LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             CCCCcCCCCCCeeccHHhcCC----CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            457999999999999988743    3688999999999999999999999999999999999999987666654432221


Q ss_pred             HHh--cCCCce-eecCChhHHHHHhh-hhccCChHhHHHHHHHHHHHHHHHHHHhhhc----CCCeeHHHHHHHHHHHHH
Q 012417          129 TEL--MGKSSI-LLINGGLQRRIHGL-IGSFFKSADLKAQITRDMEKYIHKSMENWMQ----DQPIYIQDESKNIAFQVL  200 (464)
Q Consensus       129 ~~~--~g~~~~-~~~~g~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~vdl~~~~~~~~~~~i  200 (464)
                      ...  .|...+ +..+|+.|+++|+. +.+.|+...+.. +.+.+.+.+.++++.|.+    ++.+|+.+++..+++|++
T Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi  182 (502)
T PLN02966        104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVAT-FKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVV  182 (502)
T ss_pred             ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHH
Confidence            112  232223 34569999999998 888999888876 899999999999988852    457999999999999999


Q ss_pred             HHHHcCCCChhhHH---HHHHHHHHHhhccc--cccccCCC-------chHHH-HHHHHHHHHHHHHHHHHHhhcCCCCC
Q 012417          201 VKALINLDPGEQME---ILKKQFQEFISGLM--SLPINIPG-------SQLYR-SLQAKKKMARLIQEIIQSKRDGGMSN  267 (464)
Q Consensus       201 ~~~~fG~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~p~-------~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~~  267 (464)
                      +.++||.+++...+   .+.+.+........  .+..++|.       +.+.+ ...+.+.+.+.+.+.+++..+....+
T Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (502)
T PLN02966        183 CRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK  262 (502)
T ss_pred             HHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            99999997654322   22222222111110  01111111       11112 22345556666777666654322111


Q ss_pred             CCCcchHHHHHHHccCC---CCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcC
Q 012417          268 INVPKDVIDVLMMNNAS---DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLG  344 (464)
Q Consensus       268 ~~~~~~~~~~ll~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  344 (464)
                       ....++++.+++..++   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.+  .+
T Consensus       263 -~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~--~~  339 (502)
T PLN02966        263 -PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEK--GS  339 (502)
T ss_pred             -cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc--CC
Confidence             1246899999976432   34589999999999999999999999999999999999999999999999998621  13


Q ss_pred             CCCChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccccCeEeCCCCEEecccccccCCCCCC-CCCCCCCCCCCC
Q 012417          345 EPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPWRWQ  422 (464)
Q Consensus       345 ~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l  422 (464)
                      ..++++|+++||||+|||+|++|++||++. ++|.+.+|++++||.||+||.|.++.+.+||||++| +||++|+||||+
T Consensus       340 ~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl  419 (502)
T PLN02966        340 TFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFL  419 (502)
T ss_pred             CcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhc
Confidence            458999999999999999999999999995 689999999999999999999999999999999999 999999999999


Q ss_pred             CCCCC---CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          423 DNKDI---SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       423 ~~~~~---~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      +++..   .+..|+|||.|+|.|+|++||.+|+++++|.||++|+
T Consensus       420 ~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~  464 (502)
T PLN02966        420 EKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFN  464 (502)
T ss_pred             CCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhce
Confidence            75432   2568999999999999999999999999999999996


No 21 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2e-69  Score=523.93  Aligned_cols=409  Identities=18%  Similarity=0.231  Sum_probs=315.4

Q ss_pred             CCCCCCCCCCCccccchHHHhhhhccCChH-HHHHHHHHhc-CCeeEeecCCccEEEecChHHHHHHHhcCCccccccch
Q 012417           48 LGQLPLGTLGWPIVGESLEFISCALTDRPE-SFMDKRRCMY-GKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP  125 (464)
Q Consensus        48 ~~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~-~~~~~~~~ky-G~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~  125 (464)
                      ..++||||+++|++||++.+..    +++. .++.++.++| |+||+++++++++|+|+||+.+++++.+++..|+.++.
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~----~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~  113 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIM----TRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQ  113 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhcc----CCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCC
Confidence            4568999999999999998753    1222 3455666666 79999999999999999999999999988777877654


Q ss_pred             hHHHHhcCCC--ceeec-CChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhh----cCCCeeHHHHHHHHHHH
Q 012417          126 KSLTELMGKS--SILLI-NGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQ  198 (464)
Q Consensus       126 ~~~~~~~g~~--~~~~~-~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~  198 (464)
                      ......++.+  ++++. +|+.|+++|+++.+.|........+....+.+++++++.+.    .++++|+.+.+..++++
T Consensus       114 ~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  193 (534)
T PLN03018        114 LSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYA  193 (534)
T ss_pred             chhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHH
Confidence            3333334432  46655 59999999999999876665555455565556666666654    34579999999999999


Q ss_pred             HHHHHHcCCCChh---------h-HHHHHHHHHHHhhccccc---------cccCCC----chHHHHHHHHHHHHHHHHH
Q 012417          199 VLVKALINLDPGE---------Q-MEILKKQFQEFISGLMSL---------PINIPG----SQLYRSLQAKKKMARLIQE  255 (464)
Q Consensus       199 ~i~~~~fG~~~~~---------~-~~~~~~~~~~~~~~~~~~---------~~~~p~----~~~~~~~~~~~~l~~~~~~  255 (464)
                      ++++++||.+...         . ...+...+.........+         +.|+..    ....+.......+.+++.+
T Consensus       194 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  273 (534)
T PLN03018        194 VTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNP  273 (534)
T ss_pred             HHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHH
Confidence            9999999987531         0 011111111111111111         111110    1122333345567777888


Q ss_pred             HHHHhhcCCC--CCCCCcchHHHHHHHccCCCC--CCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHH
Q 012417          256 IIQSKRDGGM--SNINVPKDVIDVLMMNNASDQ--PLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTD  331 (464)
Q Consensus       256 ~i~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~--~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  331 (464)
                      .++++++...  .+.....|+++.+++..++++  .++++++++++.++++||+|||+++++|++++|+.||++|+|+++
T Consensus       274 ~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~  353 (534)
T PLN03018        274 IIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALK  353 (534)
T ss_pred             HHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            8877654211  111124689999998654322  489999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCChhhhcCChhHHHHHhhhhcCCCCccCc-ccccccCccccCeEeCCCCEEecccccccCCCCCC
Q 012417          332 ENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGV-MRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNY  410 (464)
Q Consensus       332 Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~-~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~  410 (464)
                      ||+++++    .++.++.+++.+||||+|||+|++|++|+++.. .|.+.+|++++||.|||||.|.++.+.+|+||++|
T Consensus       354 Ei~~v~~----~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~  429 (534)
T PLN03018        354 ELDEVVG----KDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIW  429 (534)
T ss_pred             HHHHHhC----CCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccC
Confidence            9999975    456789999999999999999999999999954 69999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCC--------CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          411 EWPYQFNPWRWQDNKDI--------SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       411 ~~p~~F~P~R~l~~~~~--------~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      +||++|+||||+++++.        .+..++|||.|+|.|||++||.+|+++++|+||++|+
T Consensus       430 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~  491 (534)
T PLN03018        430 KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFN  491 (534)
T ss_pred             CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhce
Confidence            99999999999975431        2468999999999999999999999999999999996


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.6e-69  Score=522.83  Aligned_cols=399  Identities=17%  Similarity=0.204  Sum_probs=311.8

Q ss_pred             CCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeE---eecCCccEEEecChHHHHHHHhcCCccccccch-hHH
Q 012417           53 LGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFK---SHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP-KSL  128 (464)
Q Consensus        53 pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~---~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~-~~~  128 (464)
                      |||+++|++||++.+....  ...+.++.+...+||..++   +|+++.++++|+||+.+++|+.++...|..+.. ...
T Consensus        34 p~p~~~pl~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~  111 (500)
T PLN02169         34 PILKNWPFLGMLPGMLHQI--PRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI  111 (500)
T ss_pred             CCCCCCCcccchHHHHHcc--CcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence            6899999999998876532  2355666666667886655   688899999999999999999887666665432 233


Q ss_pred             HHhcCCCceeecCChhHHHHHhhhhccCChHhHHHH-HHHHHHHHHHHHHHhhh----cCCCeeHHHHHHHHHHHHHHHH
Q 012417          129 TELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQ-ITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVLVKA  203 (464)
Q Consensus       129 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~~i~~~  203 (464)
                      .+.+| +|+++++|+.|+++|+++.+.|+..++... +.+.+.+.++.+++.+.    ++.++|+.+.+..+++|+++++
T Consensus       112 ~~~~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  190 (500)
T PLN02169        112 FDVLG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTSSIL  190 (500)
T ss_pred             HHhhc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHHHhh
Confidence            45556 589999999999999999999998876541 23555555565555553    3467999999999999999999


Q ss_pred             HcCCCChhh-----HHHHHHHHHHHhhcc---cccc-------ccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCC--
Q 012417          204 LINLDPGEQ-----MEILKKQFQEFISGL---MSLP-------INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMS--  266 (464)
Q Consensus       204 ~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~-------~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~--  266 (464)
                      +||.+.+..     ...+.+.+.......   ...+       .+++....++..++.+.+.+++.+.|++++++...  
T Consensus       191 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~  270 (500)
T PLN02169        191 MTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRA  270 (500)
T ss_pred             eeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            999876421     112222222111100   0111       12233334556778888999999999887653211  


Q ss_pred             -CCCCcchHHHHHHHccCC----CCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 012417          267 -NINVPKDVIDVLMMNNAS----DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA  341 (464)
Q Consensus       267 -~~~~~~~~~~~ll~~~~~----~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  341 (464)
                       ..+...|+++.+++...+    +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++     
T Consensus       271 ~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v-----  345 (500)
T PLN02169        271 ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK-----  345 (500)
T ss_pred             cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh-----
Confidence             111246899999976321    1247899999999999999999999999999999999999999999999875     


Q ss_pred             hcCCCCChhhhcCChhHHHHHhhhhcCCCCccCcccccccCccc-cCeEeCCCCEEecccccccCCCCCC-CCCCCCCCC
Q 012417          342 QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEI-KGYLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPW  419 (464)
Q Consensus       342 ~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~  419 (464)
                           ++.+|+.+||||+|||+||||+|||+|...|.+.+|.++ +||.|||||.|.++.|++||||++| +||++|+||
T Consensus       346 -----~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~Pe  420 (500)
T PLN02169        346 -----FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPE  420 (500)
T ss_pred             -----CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCcc
Confidence                 357899999999999999999999999878888777665 9999999999999999999999999 899999999


Q ss_pred             CCCCCCCC--C--CCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          420 RWQDNKDI--S--NSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       420 R~l~~~~~--~--~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      ||+++++.  +  +..|+|||+|+|.|+|++||++|+|+++++||++|+
T Consensus       421 Rfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~  469 (500)
T PLN02169        421 RWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYD  469 (500)
T ss_pred             ccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCE
Confidence            99975443  2  568999999999999999999999999999999995


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=5.4e-71  Score=536.51  Aligned_cols=405  Identities=26%  Similarity=0.459  Sum_probs=339.0

Q ss_pred             CCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhH-HH-
Q 012417           52 PLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS-LT-  129 (464)
Q Consensus        52 Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~-~~-  129 (464)
                      ||||+++|++||++.+..   .++++.++.+++++|||||+++++++++++|+||+.+++++..+...|+.+.... +. 
T Consensus         1 Ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~   77 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR---KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEI   77 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT---THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC---CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccc
Confidence            899999999999999974   2478999999999999999999999999999999999999999977776553222 21 


Q ss_pred             --HhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhcC----CCeeHHHHHHHHHHHHHHHH
Q 012417          130 --ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQD----QPIYIQDESKNIAFQVLVKA  203 (464)
Q Consensus       130 --~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~vdl~~~~~~~~~~~i~~~  203 (464)
                        ...++.+++..+|+.|+.+|+.+.+.|+.....+ +.+.+.+.++++++.+.+.    +.+|+.++++.+++++++++
T Consensus        78 ~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~~-~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~  156 (463)
T PF00067_consen   78 FRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKILK-LEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRV  156 (463)
T ss_dssp             HHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHHH-HHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccceeeeecccccccccccccc
Confidence              2344458888899999999999999999882224 8888999999888888652    36999999999999999999


Q ss_pred             HcCCCChh---h-HHHHHHHHHHHhhcc--------cccc--ccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 012417          204 LINLDPGE---Q-MEILKKQFQEFISGL--------MSLP--INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNIN  269 (464)
Q Consensus       204 ~fG~~~~~---~-~~~~~~~~~~~~~~~--------~~~~--~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~  269 (464)
                      +||.+++.   . ..++.+.+..+...+        ..++  .+++....++..++.+.+.+++.+.+++++++...+..
T Consensus       157 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  236 (463)
T PF00067_consen  157 LFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGDE  236 (463)
T ss_dssp             HHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSS
T ss_pred             cccceeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99997652   1 223334333332211        1111  23455556667777888999999999988776543323


Q ss_pred             CcchHHHHHHHcc-C-CC-CCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCC
Q 012417          270 VPKDVIDVLMMNN-A-SD-QPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEP  346 (464)
Q Consensus       270 ~~~~~~~~ll~~~-~-~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~  346 (464)
                      ...|+++.++... + ++ .+++++++++.+..+++||+|||+.+++|++++|++||++|+++++|++++.+    .+..
T Consensus       237 ~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~~~  312 (463)
T PF00067_consen  237 SRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG----DGRE  312 (463)
T ss_dssp             SCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT----TSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccc
Confidence            5679999999985 2 33 37999999999999999999999999999999999999999999999999874    4457


Q ss_pred             CChhhhcCChhHHHHHhhhhcCCCCcc-CcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 012417          347 LSWSDYLSLPFTQNVITETLRMGNIII-GVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNK  425 (464)
Q Consensus       347 ~~~~~l~~lp~L~a~i~E~lRl~~~~~-~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~  425 (464)
                      ++.+++.+||||+|||+|++|++|+++ .++|.+.+|++++||.|||||.|.++.+.+|+||++|+||++|+||||++.+
T Consensus       313 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~  392 (463)
T PF00067_consen  313 ITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDER  392 (463)
T ss_dssp             HHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            899999999999999999999999999 7889999999999999999999999999999999999999999999999987


Q ss_pred             C---CCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          426 D---ISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       426 ~---~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      .   .....|+|||.|+|.|||++||++|+++++|.||++|+
T Consensus       393 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~  434 (463)
T PF00067_consen  393 GISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFD  434 (463)
T ss_dssp             STBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEE
T ss_pred             cccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCE
Confidence            6   25889999999999999999999999999999999995


No 24 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=4.2e-69  Score=517.90  Aligned_cols=399  Identities=19%  Similarity=0.261  Sum_probs=311.3

Q ss_pred             CCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH-HH
Q 012417           52 PLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL-TE  130 (464)
Q Consensus        52 Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~-~~  130 (464)
                      ||||+++|++||++++..    ++++.++.+++++||+||++++++++.|+|+||+.+++++.++...|+.+..... ..
T Consensus         1 ppgp~~lP~iG~l~~~~~----~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~   76 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE----KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTV   76 (466)
T ss_pred             CcCCCCCCccccHHHcCC----CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHH
Confidence            789999999999988854    3688999999999999999999999999999999999999988777876543222 23


Q ss_pred             hcCCC-ceeec-CChhHHHHHhhhhcc-CChHhHHHHHHHHHHHHHHHHHHhhh------cCCCeeHHHHHHHHHHHHHH
Q 012417          131 LMGKS-SILLI-NGGLQRRIHGLIGSF-FKSADLKAQITRDMEKYIHKSMENWM------QDQPIYIQDESKNIAFQVLV  201 (464)
Q Consensus       131 ~~g~~-~~~~~-~g~~~~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~vdl~~~~~~~~~~~i~  201 (464)
                      +.|+. .++.. +|+.|+++|+.+.+. ++...... +.+.+.+.++.+++.+.      .+++||+.+.+..+++|+++
T Consensus        77 ~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~  155 (466)
T PLN02655         77 LTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKR-FRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSL  155 (466)
T ss_pred             HhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHH-hHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHH
Confidence            44432 34444 489999999866654 55444443 56655555555544442      24689999999999999999


Q ss_pred             HHHcCCCChhhH-----------HHHHHHHHHHhhccc------ccc--ccCCCchHHHH-HHHHHHHHHHHHHHHHHhh
Q 012417          202 KALINLDPGEQM-----------EILKKQFQEFISGLM------SLP--INIPGSQLYRS-LQAKKKMARLIQEIIQSKR  261 (464)
Q Consensus       202 ~~~fG~~~~~~~-----------~~~~~~~~~~~~~~~------~~~--~~~p~~~~~~~-~~~~~~l~~~~~~~i~~~~  261 (464)
                      .++||.+.+...           ..+...+..+.....      .++  .+++...+.+. .+....+.+++.+.+++++
T Consensus       156 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  235 (466)
T PLN02655        156 IQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQK  235 (466)
T ss_pred             HHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998755321           111222222221110      111  12333222222 2233445567777777665


Q ss_pred             cCCCCCCCCcchHHHHHHHccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Q 012417          262 DGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA  341 (464)
Q Consensus       262 ~~~~~~~~~~~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  341 (464)
                      +....+ ....|+++.+++..   ..++++++.+.+.++++||+|||+++++|++++|++||++|+|+++|++++.+   
T Consensus       236 ~~~~~~-~~~~d~l~~ll~~~---~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~---  308 (466)
T PLN02655        236 KRIARG-EERDCYLDFLLSEA---THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCG---  308 (466)
T ss_pred             HhhcCC-CCcccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhC---
Confidence            532111 13458999999773   35899999999999999999999999999999999999999999999999875   


Q ss_pred             hcCCCCChhhhcCChhHHHHHhhhhcCCCCccC-cccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCC
Q 012417          342 QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIG-VMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR  420 (464)
Q Consensus       342 ~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~-~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  420 (464)
                       . ..++++++.+||||+|||+|+||++||++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus       309 -~-~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR  386 (466)
T PLN02655        309 -D-ERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPER  386 (466)
T ss_pred             -C-CCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccc
Confidence             2 348999999999999999999999999995 4799999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC--CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          421 WQDNKDI--SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       421 ~l~~~~~--~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |++.+..  +...++|||.|+|.|||++||..|++++++.||++|+
T Consensus       387 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~  432 (466)
T PLN02655        387 FLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFE  432 (466)
T ss_pred             cCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeE
Confidence            9976433  3578999999999999999999999999999999985


No 25 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=8.7e-69  Score=522.80  Aligned_cols=405  Identities=20%  Similarity=0.246  Sum_probs=310.8

Q ss_pred             CCCCCCCccccchHHHhhhhccCChHHHHHHHHHhc---CCeeEeecCCccEEEecChHHHHHHHhcCCccccccchh--
Q 012417           52 PLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMY---GKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPK--  126 (464)
Q Consensus        52 Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~ky---G~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~--  126 (464)
                      ||||+++|++||++.+..     + +..+.++.++|   |++|++++++++.++++||+.+++|+.++...|......  
T Consensus        32 ~pgp~~~p~~G~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~  105 (516)
T PLN03195         32 RKGPKSWPIIGAALEQLK-----N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS  105 (516)
T ss_pred             cCCCCCCCeecchHHHHh-----c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH
Confidence            589999999999877654     1 23345666666   799999999999999999999999998764555443211  


Q ss_pred             HHHHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHH-HHHHHHHHHhhh----cCCCeeHHHHHHHHHHHHHH
Q 012417          127 SLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDM-EKYIHKSMENWM----QDQPIYIQDESKNIAFQVLV  201 (464)
Q Consensus       127 ~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~~i~  201 (464)
                      .....+| +++++.+|+.|+++|+++++.|+...++. +.+.+ .+.++.+.+.+.    .++++|+.+++..+++|+++
T Consensus       106 ~~~~~~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~-~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  183 (516)
T PLN03195        106 YMEVLLG-DGIFNVDGELWRKQRKTASFEFASKNLRD-FSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSIC  183 (516)
T ss_pred             HHHHHhc-CeeeccCcHHHHHHHHhcchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHH
Confidence            1223445 47888899999999999999999988876 66654 555555554443    35679999999999999999


Q ss_pred             HHHcCCCChhh-----HHHHHHHHHHHhhcc---ccccc-----cCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCC--
Q 012417          202 KALINLDPGEQ-----MEILKKQFQEFISGL---MSLPI-----NIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMS--  266 (464)
Q Consensus       202 ~~~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~~-----~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~--  266 (464)
                      .++||.+++..     ...+.+.+.......   ...+.     +++....++..++.+.+.+++.+.++++++....  
T Consensus       184 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  263 (516)
T PLN03195        184 KVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEAR  263 (516)
T ss_pred             HHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99999876531     112322222211110   00011     1111112333456677778888888776543111  


Q ss_pred             --CCCCcchHHHHHHHccCC-CCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh--
Q 012417          267 --NINVPKDVIDVLMMNNAS-DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKA--  341 (464)
Q Consensus       267 --~~~~~~~~~~~ll~~~~~-~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~--  341 (464)
                        +.....|+++.+++..++ +..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++.....  
T Consensus       264 ~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~  343 (516)
T PLN03195        264 KSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKE  343 (516)
T ss_pred             cccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccc
Confidence              111356899999976432 446999999999999999999999999999999999999999999999998864210  


Q ss_pred             --------------hcCCCCChhhhcCChhHHHHHhhhhcCCCCccCcccccccCccc-cCeEeCCCCEEecccccccCC
Q 012417          342 --------------QLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEI-KGYLIPKGWCFFAYFRSVHLD  406 (464)
Q Consensus       342 --------------~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d  406 (464)
                                    ..++.++++++.+||||+|||+|+||++||++...|.+.+|.++ +||.|||||.|.++.+.+|||
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~d  423 (516)
T PLN03195        344 EDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRM  423 (516)
T ss_pred             ccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccC
Confidence                          01345899999999999999999999999999878888887766 899999999999999999999


Q ss_pred             CCCC-CCCCCCCCCCCCCCCC--C-CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          407 ESNY-EWPYQFNPWRWQDNKD--I-SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       407 ~~~~-~~p~~F~P~R~l~~~~--~-~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |++| +||++|+||||++.+.  . .+..|+|||.|+|.|+|++||++|++++++.|+++|+
T Consensus       424 p~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~  485 (516)
T PLN03195        424 EYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFK  485 (516)
T ss_pred             hhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhce
Confidence            9999 9999999999996432  1 3567999999999999999999999999999999986


No 26 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.5e-67  Score=515.98  Aligned_cols=383  Identities=18%  Similarity=0.280  Sum_probs=304.1

Q ss_pred             cCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHHHHhcCCCceeecCChhHHHHHhhh
Q 012417           73 TDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLI  152 (464)
Q Consensus        73 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~~~~~g~~~~~~~~g~~~~~~R~~~  152 (464)
                      .+.++..+.+++++|||||++++++.++++|+||+.+++||..+...|..+..........+.+++..+|+.|+.+|+.+
T Consensus       150 ~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l  229 (633)
T PLN02738        150 GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAI  229 (633)
T ss_pred             CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhc
Confidence            35688999999999999999999988999999999999999987666765533222222233578888999999999999


Q ss_pred             hccCChHhHHHHHHHHHHHHHHHHHHhhhc----CCCeeHHHHHHHHHHHHHHHHHcCCCChhh--HHHHHHHHHHHhhc
Q 012417          153 GSFFKSADLKAQITRDMEKYIHKSMENWMQ----DQPIYIQDESKNIAFQVLVKALINLDPGEQ--MEILKKQFQEFISG  226 (464)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~  226 (464)
                      .+.|+...+.. +.+.+.+.++++++.+.+    ++++|+.+.+..+++|+|+.++||.+++..  .+.+...+...+..
T Consensus       230 ~p~Fs~~~v~~-l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~  308 (633)
T PLN02738        230 VPALHQKYVAA-MISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLRE  308 (633)
T ss_pred             cHhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHH
Confidence            99999988876 899999999999888853    568999999999999999999999877631  11222222222111


Q ss_pred             -----ccccccc-CCC-----chHHHHHHHHHHHHHHHHHHHHHhhc---CC----CC--CCCCcchHHHHHHHccCCCC
Q 012417          227 -----LMSLPIN-IPG-----SQLYRSLQAKKKMARLIQEIIQSKRD---GG----MS--NINVPKDVIDVLMMNNASDQ  286 (464)
Q Consensus       227 -----~~~~~~~-~p~-----~~~~~~~~~~~~l~~~~~~~i~~~~~---~~----~~--~~~~~~~~~~~ll~~~~~~~  286 (464)
                           ...++.| +|.     +..++..++.+.+.+.+.+.++.++.   +.    ..  ......++++.|++..   .
T Consensus       309 ~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~---~  385 (633)
T PLN02738        309 AEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG---D  385 (633)
T ss_pred             HHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC---C
Confidence                 1111111 111     11223334444555555555443221   00    00  0113458999998762   3


Q ss_pred             CCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHHHHhhhh
Q 012417          287 PLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETL  366 (464)
Q Consensus       287 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~l  366 (464)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++     +..++++++++||||+|||+|+|
T Consensus       386 ~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-----~~~~t~edL~kLPYL~AVIkEtL  460 (633)
T PLN02738        386 DVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-----DRFPTIEDMKKLKYTTRVINESL  460 (633)
T ss_pred             CCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-----CCCCCHHHHccCHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999999875     35689999999999999999999


Q ss_pred             cCCCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCC----C-CCCCccccCCCCCC
Q 012417          367 RMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKD----I-SNSSFTPFGGGQRL  441 (464)
Q Consensus       367 Rl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~----~-~~~~~~~Fg~G~r~  441 (464)
                      |+||+++.+.|++.+|++++||.||+||.|.++.+.+||||++|+||++|+||||+..+.    . ....|+|||.|+|.
T Consensus       461 RL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~  540 (633)
T PLN02738        461 RLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRK  540 (633)
T ss_pred             hcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCC
Confidence            999999987899999999999999999999999999999999999999999999984321    1 25689999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHhhcC
Q 012417          442 CPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       442 C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |+|++||++|+++++|.|+++|+
T Consensus       541 CiG~~lA~~El~l~LA~Llr~F~  563 (633)
T PLN02738        541 CVGDMFASFENVVATAMLVRRFD  563 (633)
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCe
Confidence            99999999999999999999995


No 27 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3e-67  Score=473.57  Aligned_cols=405  Identities=17%  Similarity=0.276  Sum_probs=332.3

Q ss_pred             CCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEee-cCCccEEEecChHHHHHHHhcCCcc-ccc-c-ch-
Q 012417           51 LPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSH-IFGTPTIVSTDAEVSKFVLQSDAKA-FVP-F-YP-  125 (464)
Q Consensus        51 ~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~-~~~~~~v~v~~~~~i~~vl~~~~~~-f~~-~-~~-  125 (464)
                      ..|||+++|++|.+..+.. ....+.|+....++++|||||+.. +|+...|.+.+|++++.++.+++.. |.. . .+ 
T Consensus        51 ~IP~p~~~~~l~~l~~~~~-~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~~~w  129 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRA-GGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLIEPW  129 (519)
T ss_pred             hcCCCCCccHHHHHHHHHh-hhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCcccccchh
Confidence            4579999999999886333 333688999999999999999999 7778999999999999999998743 211 1 11 


Q ss_pred             hHHHHhcC-CCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhc-------CCCeeHHHHHHHHHH
Q 012417          126 KSLTELMG-KSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQ-------DQPIYIQDESKNIAF  197 (464)
Q Consensus       126 ~~~~~~~g-~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~vdl~~~~~~~~~  197 (464)
                      ....+.++ ..|+++.+|+.|++.|..+++.+-.....+.+.+.++..++++++.+..       ..+.|+.+.+.++++
T Consensus       130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wsl  209 (519)
T KOG0159|consen  130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSL  209 (519)
T ss_pred             hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence            11244554 4699999999999999999998655544445888888888888877653       246799999999999


Q ss_pred             HHHHHHHcCCCChh-------hHHHHHHHHHHHhhccc------cccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 012417          198 QVLVKALINLDPGE-------QMEILKKQFQEFISGLM------SLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGG  264 (464)
Q Consensus       198 ~~i~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  264 (464)
                      +.||.++||.+.+.       +...+.+....++....      .+..+++.+.|++..++.+.+.+.+.+.|++..+..
T Consensus       210 Esi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l  289 (519)
T KOG0159|consen  210 ESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEEL  289 (519)
T ss_pred             HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987663       23344444444433221      122356788899999999999999999888765532


Q ss_pred             CCCC----CCcchHHHHHHHccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Q 012417          265 MSNI----NVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELK  340 (464)
Q Consensus       265 ~~~~----~~~~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  340 (464)
                      ..+.    +....++..|..+     .++.+++...+.+++.||.|||+.++.|+||.|++||++|++|++|+..+..  
T Consensus       290 ~~~~~~~~~~~~~l~~~L~~~-----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p--  362 (519)
T KOG0159|consen  290 EKQDSAGSEYTGSLLELLLRK-----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLP--  362 (519)
T ss_pred             HhccccccchhHHHHHHHHHc-----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCC--
Confidence            2211    1233444444443     5899999999999999999999999999999999999999999999999876  


Q ss_pred             hhcCCCCChhhhcCChhHHHHHhhhhcCCCCccCcccccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCC
Q 012417          341 AQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWR  420 (464)
Q Consensus       341 ~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R  420 (464)
                       ..+..++.+++.+||||.||||||+||||.+++..|+..+|.+++||.|||||.|.++.+.+.+||+.|++|++|+|||
T Consensus       363 -~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeR  441 (519)
T KOG0159|consen  363 -SGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPER  441 (519)
T ss_pred             -CcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhh
Confidence             1256789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC-CC-CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          421 WQDNK-DI-SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       421 ~l~~~-~~-~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      |+.++ .. ++..++|||.|+|+|+|+.+|.+|+.+++|.|+++|+
T Consensus       442 WL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~  487 (519)
T KOG0159|consen  442 WLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFK  487 (519)
T ss_pred             hcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcc
Confidence            99988 55 7999999999999999999999999999999999996


No 28 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-66  Score=457.81  Aligned_cols=403  Identities=24%  Similarity=0.365  Sum_probs=340.5

Q ss_pred             CCCCCCCCC-ccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccc--cchh
Q 012417           50 QLPLGTLGW-PIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVP--FYPK  126 (464)
Q Consensus        50 ~~Ppgp~~~-p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~--~~~~  126 (464)
                      .-||.-++| |++|++..+.+     +|..+++++++|||+||++.++|+.+.++.||+....+++.....++.  ....
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk-----~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~  105 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGK-----DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSK  105 (486)
T ss_pred             CCCcccccCcchhhHHHHhcc-----CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHH
Confidence            457878776 99999999865     999999999999999999999999999999999999999887444432  2223


Q ss_pred             HHHHhcCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHh-hhcCCCe-eHHHHHHHHHHHHHHHHH
Q 012417          127 SLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMEN-WMQDQPI-YIQDESKNIAFQVLVKAL  204 (464)
Q Consensus       127 ~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v-dl~~~~~~~~~~~i~~~~  204 (464)
                      ...+.+|.+.+...+.....++.+++...+...++++ +.+.|.+++++.++. |.+.... .+...+..+++.+....+
T Consensus       106 l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~-~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll  184 (486)
T KOG0684|consen  106 LTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKS-LVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLL  184 (486)
T ss_pred             hhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHH-HHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhh
Confidence            3466778655556678889999999999999999987 899999999998888 5554444 477777888888777777


Q ss_pred             cCCCChhhHHHHHHHHHHHhhccc----cccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCcchHHHHHHH
Q 012417          205 INLDPGEQMEILKKQFQEFISGLM----SLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMM  280 (464)
Q Consensus       205 fG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~  280 (464)
                      ||.............+.++...+.    .+|.++|.+.+++..++++++.+.+...+.++++....   ...|+++.+++
T Consensus       185 ~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~---~~~dmlq~l~~  261 (486)
T KOG0684|consen  185 GGEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASISK---WDNDMLQSLME  261 (486)
T ss_pred             hhhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcccc---ccHHHHHHHHH
Confidence            776554433343444444444433    23447788888888899999999999999988886632   46789999999


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHH
Q 012417          281 NNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQN  360 (464)
Q Consensus       281 ~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a  360 (464)
                      ...++.+.+++|+++.++.+++||+.|++.+.+|++++|++|||+++.+++|++++++   +....++.+.+++||.|++
T Consensus       262 ~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG---~~~~~l~~d~L~~lplL~~  338 (486)
T KOG0684|consen  262 KYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLG---EKKEKLTYDQLKDLPLLDS  338 (486)
T ss_pred             HhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhh---ccCCCCCHHHHhcchHHHH
Confidence            5457888999999999999999999999999999999999999999999999999996   2344599999999999999


Q ss_pred             HHhhhhcCCCCccCcccccccCccccC----eEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC-------C
Q 012417          361 VITETLRMGNIIIGVMRKAMRDIEIKG----YLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDIS-------N  429 (464)
Q Consensus       361 ~i~E~lRl~~~~~~~~R~~~~d~~i~g----~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~-------~  429 (464)
                      ||+|||||+||.+.+.|.+.+|.++.+    |.||+|..|.++.+.+|+||++|+||++|+|+||++++++.       .
T Consensus       339 ~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~  418 (486)
T KOG0684|consen  339 CIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLD  418 (486)
T ss_pred             HHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCccccccccccc
Confidence            999999999999988999999999976    99999999999999999999999999999999999766541       2


Q ss_pred             CCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          430 SSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       430 ~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      ..++|||+|.|.|||++||.+|+|.++..+|++||
T Consensus       419 yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fd  453 (486)
T KOG0684|consen  419 YYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFD  453 (486)
T ss_pred             ccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcc
Confidence            34699999999999999999999999999999996


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=5.7e-66  Score=498.28  Aligned_cols=403  Identities=17%  Similarity=0.262  Sum_probs=321.7

Q ss_pred             CCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcCCccccccchhHH-HHh
Q 012417           53 LGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSL-TEL  131 (464)
Q Consensus        53 pgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~~~~-~~~  131 (464)
                      .|..|||.+|..+.+......+.++..+.+++++|||||++++++.+.++++|||++++|+.+.+..|........ ...
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~   94 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFL   94 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHH
Confidence            6889999999999998887778899999999999999999999999999999999999999887666765443222 233


Q ss_pred             cCCCceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhh----cCCCeeHHHHHHHHHHHHHHHHHcCC
Q 012417          132 MGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYIQDESKNIAFQVLVKALINL  207 (464)
Q Consensus       132 ~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vdl~~~~~~~~~~~i~~~~fG~  207 (464)
                      +| .+++..+|+.|+++|+++.+.|+...+...+.+.+.+.++++++.+.    +++++|+.+.+..+++++++.++||.
T Consensus        95 ~~-~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~fG~  173 (489)
T PLN02936         95 FG-SGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSVFNY  173 (489)
T ss_pred             hc-CccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCC
Confidence            45 57888899999999999999999877776444567777777777764    34689999999999999999999999


Q ss_pred             CChhh--HHHHHHHHHHHhhc-----ccccccc-C-----CCchHHHHHHHHHHHHHHHHHHHHHhhcCC---C-----C
Q 012417          208 DPGEQ--MEILKKQFQEFISG-----LMSLPIN-I-----PGSQLYRSLQAKKKMARLIQEIIQSKRDGG---M-----S  266 (464)
Q Consensus       208 ~~~~~--~~~~~~~~~~~~~~-----~~~~~~~-~-----p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~---~-----~  266 (464)
                      +++..  ..++...+......     ...++.+ +     ..+..++..++.+.+.+.+.+.++++++..   .     .
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~  253 (489)
T PLN02936        174 NFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGE  253 (489)
T ss_pred             CccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            87642  11122211111110     0011111 0     011234556667777777777776654310   0     0


Q ss_pred             C--CCCcchHHHHHHHccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcC
Q 012417          267 N--INVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLG  344 (464)
Q Consensus       267 ~--~~~~~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~  344 (464)
                      +  .....++++.+++..   ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++     +
T Consensus       254 ~~~~~~~~d~l~~ll~~~---~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~-----~  325 (489)
T PLN02936        254 EYVNDSDPSVLRFLLASR---EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQ-----G  325 (489)
T ss_pred             cccccCchHHHHHHHhcc---ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc-----C
Confidence            0  013468999998763   24899999999999999999999999999999999999999999999999875     2


Q ss_pred             CCCChhhhcCChhHHHHHhhhhcCCCCccCcc-cccccCccccCeEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCC
Q 012417          345 EPLSWSDYLSLPFTQNVITETLRMGNIIIGVM-RKAMRDIEIKGYLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQD  423 (464)
Q Consensus       345 ~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~-R~~~~d~~i~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~  423 (464)
                      ..++++++.+||||+|||+||+|++||++... |.+.+|+.++||.||+||.|+++.+.+||||++|+||++|+||||+.
T Consensus       326 ~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~  405 (489)
T PLN02936        326 RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDL  405 (489)
T ss_pred             CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCC
Confidence            45789999999999999999999999998544 55566777899999999999999999999999999999999999996


Q ss_pred             CCCC-----CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          424 NKDI-----SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       424 ~~~~-----~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      ++..     .+..++|||.|+|.|||++||++|++++++.|+++|+
T Consensus       406 ~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~  451 (489)
T PLN02936        406 DGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLD  451 (489)
T ss_pred             CCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCe
Confidence            4421     1458999999999999999999999999999999996


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=7.8e-64  Score=482.40  Aligned_cols=388  Identities=17%  Similarity=0.227  Sum_probs=307.4

Q ss_pred             CccccchHHHhhhhccCChHHHHHHHHHhcC-CeeEeecCCccEEEecChHHHHHHHhcCCccccccch--hHHHHhcCC
Q 012417           58 WPIVGESLEFISCALTDRPESFMDKRRCMYG-KVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYP--KSLTELMGK  134 (464)
Q Consensus        58 ~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~~~~~--~~~~~~~g~  134 (464)
                      .++.|++.....     +...++..+.++++ .+++++.++.  ++++||+.+++++..+...|.....  ..+.+.+|.
T Consensus        49 ~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~  121 (502)
T PLN02426         49 AYLTASWAKDFD-----NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGR  121 (502)
T ss_pred             CCccHHHHHhcc-----cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCC
Confidence            457888876543     45677777888887 6788877664  8999999999999987666654432  223456665


Q ss_pred             CceeecCChhHHHHHhhhhccCChHhHHHHH-HHHHHHHHHHHHHhhhc------CCCeeHHHHHHHHHHHHHHHHHcCC
Q 012417          135 SSILLINGGLQRRIHGLIGSFFKSADLKAQI-TRDMEKYIHKSMENWMQ------DQPIYIQDESKNIAFQVLVKALINL  207 (464)
Q Consensus       135 ~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~vdl~~~~~~~~~~~i~~~~fG~  207 (464)
                       |+++.+|+.|+++||++++.|+...+.... ++.+.+..+++++.+.+      ++++|+.+++..+++|+++.++||.
T Consensus       122 -gi~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  200 (502)
T PLN02426        122 -GIFNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGL  200 (502)
T ss_pred             -ceeecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCC
Confidence             899999999999999999999988877622 35555656666555432      2579999999999999999999998


Q ss_pred             CChhh-----HHHHHHHHHHHhhc-----ccccc------ccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCc
Q 012417          208 DPGEQ-----MEILKKQFQEFISG-----LMSLP------INIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVP  271 (464)
Q Consensus       208 ~~~~~-----~~~~~~~~~~~~~~-----~~~~~------~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  271 (464)
                      +++..     ..++.+.+......     ....+      .+++.+..++..++.+.+.+++.+.++++++....   ..
T Consensus       201 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~---~~  277 (502)
T PLN02426        201 DPGCLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFS---AS  277 (502)
T ss_pred             CCcccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccC---Cc
Confidence            76532     12233333322110     00111      12232334566777888999999999988764321   35


Q ss_pred             chHHHHHHHccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhh
Q 012417          272 KDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSD  351 (464)
Q Consensus       272 ~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~  351 (464)
                      .|+++.+++..     .+++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++.+.   ....+++++
T Consensus       278 ~dll~~ll~~~-----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~---~~~~~t~~~  349 (502)
T PLN02426        278 KDLLSRFMASI-----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP---NQEAASFEE  349 (502)
T ss_pred             chHHHHHHhcC-----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC---CCCCCCHHH
Confidence            68999999763     3788999999999999999999999999999999999999999999988751   234689999


Q ss_pred             hcCChhHHHHHhhhhcCCCCccCcccccccCccc-cCeEeCCCCEEecccccccCCCCCC-CCCCCCCCCCCCCCCCC--
Q 012417          352 YLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEI-KGYLIPKGWCFFAYFRSVHLDESNY-EWPYQFNPWRWQDNKDI--  427 (464)
Q Consensus       352 l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i-~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~--  427 (464)
                      +.+||||+|||+|+||++||++...|.+.+|.++ +|+.||+||.|.++.+.+||||++| +||++|+||||++++..  
T Consensus       350 l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~  429 (502)
T PLN02426        350 MKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVP  429 (502)
T ss_pred             HhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCC
Confidence            9999999999999999999999778999998887 8999999999999999999999999 99999999999974321  


Q ss_pred             -CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          428 -SNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       428 -~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                       ++..++|||.|+|.|+|+++|++|++++++.|+++|+
T Consensus       430 ~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~  467 (502)
T PLN02426        430 ENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFD  467 (502)
T ss_pred             CCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHce
Confidence             3568999999999999999999999999999999995


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2e-63  Score=471.94  Aligned_cols=399  Identities=17%  Similarity=0.247  Sum_probs=302.3

Q ss_pred             CCCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCC-eeEeecCCccE-------EEecChHHHHHHHhc----
Q 012417           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGK-VFKSHIFGTPT-------IVSTDAEVSKFVLQS----  115 (464)
Q Consensus        48 ~~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~-i~~~~~~~~~~-------v~v~~~~~i~~vl~~----  115 (464)
                      ..+.|||+.|||++|+.+++++.....++..++.+.++|||+ ||+++++|.|+       |+++|||+++.++.+    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            345699999999999999888755556889999999999998 99999999766       999999999999985    


Q ss_pred             CCccccccchhHHHHhcCCC---ceeecCChhHHHHHhhhhccCChHhHHHHHHHHHHHHHHHHHHhhh----cCCCeeH
Q 012417          116 DAKAFVPFYPKSLTELMGKS---SILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWM----QDQPIYI  188 (464)
Q Consensus       116 ~~~~f~~~~~~~~~~~~g~~---~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vdl  188 (464)
                      +...|...++.... ++|++   +++..+|+.|+++|+++.+.|+ ..+.. +.+.|.+.++++++.|.    +++++|+
T Consensus        95 ~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~-~~~~m~~~~~~~~~~w~~~~~~~~~vdv  171 (480)
T PLN02648         95 KRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRR-FIPEFRAAFAELFDTWEAELAKKGKAEF  171 (480)
T ss_pred             ccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-Hhhhh-hhhHHHHHHHHHHHHHHHHHhhCCCccc
Confidence            44445555555554 88876   6777889999999999999998 56665 89999999999999994    3457999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHHhhccccccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCC-CC
Q 012417          189 QDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGM-SN  267 (464)
Q Consensus       189 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~  267 (464)
                      .+.+..++++++++++||.+.+.  ..+.+.+..+...+.... .+|.        +...+...+++.+.++..... ..
T Consensus       172 ~~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~-~~p~--------~~~~l~~~~~~~i~~~~~~~~~~~  240 (480)
T PLN02648        172 NDPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQ-LAPL--------ASTGLPHVLEELLLHTFPLPFFLV  240 (480)
T ss_pred             cchHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHH-hhHH--------HHcCchHHHHHHhhcccCCchhhh
Confidence            99999999999999999987654  222222222222111000 0000        000011111221111100000 00


Q ss_pred             CCCcchHH-------HHHHHccCCCCCCCHHHHHHHHHH-HHhhccccHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHH
Q 012417          268 INVPKDVI-------DVLMMNNASDQPLTDDLIADNMID-MMIPGEDSVPVLMTLAVKYLSDYPA-ALQQLTDENIKLKE  338 (464)
Q Consensus       268 ~~~~~~~~-------~~ll~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~p~-~~~~l~~Ei~~~~~  338 (464)
                      ....++++       +.+++..++ .++++++++++++. +.++|++|++++++|++++|++||+ +|+++++|++.+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~ll~~~~~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~  319 (480)
T PLN02648        241 KSDYDKLYDFFRASATEALDLAEK-FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVK  319 (480)
T ss_pred             hccHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhc
Confidence            00111222       244443222 35999999999875 4467788888899999999999995 99999999999874


Q ss_pred             HHhhcCCCCChhhhcCChhHHHHHhhhhcCCCCccCcccccccCcccc----CeEeCCCCEEecccccccCCCCCCCCCC
Q 012417          339 LKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIK----GYLIPKGWCFFAYFRSVHLDESNYEWPY  414 (464)
Q Consensus       339 ~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~----g~~ip~G~~v~~~~~~~~~d~~~~~~p~  414 (464)
                      .   .+..++++++.+||||++||+|++|++|+++...|++.+|++++    ||.||||+.|+++.+.+||||++|+||+
T Consensus       320 ~---~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~  396 (480)
T PLN02648        320 A---GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPE  396 (480)
T ss_pred             c---CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcc
Confidence            1   23568999999999999999999999999998889999999996    7999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcccc---------CCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          415 QFNPWRWQDNKDISNSSFTPF---------GGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       415 ~F~P~R~l~~~~~~~~~~~~F---------g~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      +|+|+||++++......+++|         |+|+|.|||++||++|+++++++|+++|+
T Consensus       397 ~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~  455 (480)
T PLN02648        397 EFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYD  455 (480)
T ss_pred             eeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhC
Confidence            999999997543222344444         67789999999999999999999999995


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.2e-55  Score=414.43  Aligned_cols=350  Identities=23%  Similarity=0.397  Sum_probs=295.6

Q ss_pred             hHHHHHHHHHhcCCeeEeecCCcc--EEEecChHHHHHHHhcCCccccccch----h-HHHHhcCCCceeecCChhHHHH
Q 012417           76 PESFMDKRRCMYGKVFKSHIFGTP--TIVSTDAEVSKFVLQSDAKAFVPFYP----K-SLTELMGKSSILLINGGLQRRI  148 (464)
Q Consensus        76 ~~~~~~~~~~kyG~i~~~~~~~~~--~v~v~~~~~i~~vl~~~~~~f~~~~~----~-~~~~~~g~~~~~~~~g~~~~~~  148 (464)
                      +......+.+.||.+++.+..++-  .+++++++.+++++.++. .++....    . .....+|..++++.||+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            345566778888999888887765  799999999999999873 2222211    1 1345666655888999999999


Q ss_pred             HhhhhccCChHhHHHHHHHHHHHHHHHHHHhhhcCCCeeHHHHHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHHhhccc
Q 012417          149 HGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLM  228 (464)
Q Consensus       149 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~  228 (464)
                      |++++++|++..+.. +.+.+.+.++++++.+..++.+++.+.+..+++++++ .+||.+.++...........+.. . 
T Consensus       103 Rkl~~~~F~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~-~-  178 (411)
T COG2124         103 RKLLAPAFTPRALRG-YRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR-L-  178 (411)
T ss_pred             HHHhccccCHHHHHH-HHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc-c-
Confidence            999999999999887 9999999999999998333577799999999999999 89999877653333322222222 1 


Q ss_pred             cccccCCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCcchHHHHHHHccCCCC-CCCHHHHHHHHHHHHhhcccc
Q 012417          229 SLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQ-PLTDDLIADNMIDMMIPGEDS  307 (464)
Q Consensus       229 ~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-~l~~~~i~~~~~~~~~ag~~t  307 (464)
                       .+...+...+.+..++..++.+++.+.|++++.+      ..+|+++.++.+.++++ .+|++||.++++++++||+||
T Consensus       179 -~~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~------~~~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheT  251 (411)
T COG2124         179 -DPDLGPEEPWRRARAARRELDAYLRALIAERRAA------PRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHET  251 (411)
T ss_pred             -CcccCCcccHHHHHHHHHHHHHHHHHHHHHhccC------CcccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHH
Confidence             1223334457788899999999999999999843      36789999998876555 599999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHHHHhhhhcCCCCccCcccccccCccccC
Q 012417          308 VPVLMTLAVKYLSDYPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRMGNIIIGVMRKAMRDIEIKG  387 (464)
Q Consensus       308 t~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~g  387 (464)
                      |+++|+|+++.|++||++++++++|.+.                    ||++++|+|+||+|||++...|.+.+|++++|
T Consensus       252 Ta~~l~~a~~~L~~~P~~~~~l~~e~~~--------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg  311 (411)
T COG2124         252 TANALAWALYALLRHPDQLAKLRAEPDR--------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGG  311 (411)
T ss_pred             HHHHHHHHHHHHHHCchHHHHHHhCcch--------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCC
Confidence            9999999999999999999999988643                    78899999999999999988899999999999


Q ss_pred             eEeCCCCEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHhhcC
Q 012417          388 YLIPKGWCFFAYFRSVHLDESNYEWPYQFNPWRWQDNKDISNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFR  464 (464)
Q Consensus       388 ~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  464 (464)
                      +.||+|+.|.++++.+||||++|++|++|+|+||.       ..++|||+|+|.|+|..||++|++++++.+|++|+
T Consensus       312 ~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~  381 (411)
T COG2124         312 YRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN-------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFP  381 (411)
T ss_pred             EEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC-------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999997       57999999999999999999999999999999985


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=69.57  E-value=3.1  Score=26.74  Aligned_cols=9  Identities=33%  Similarity=0.948  Sum_probs=7.0

Q ss_pred             CCCCCCCCC
Q 012417          417 NPWRWQDNK  425 (464)
Q Consensus       417 ~P~R~l~~~  425 (464)
                      ||||||.-.
T Consensus        44 DPERWLP~~   52 (59)
T PF08492_consen   44 DPERWLPKR   52 (59)
T ss_pred             CccccCchh
Confidence            789998754


No 34 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=64.51  E-value=4.7  Score=31.22  Aligned_cols=6  Identities=0%  Similarity=0.074  Sum_probs=2.1

Q ss_pred             hHHHHH
Q 012417           13 AASFFS   18 (464)
Q Consensus        13 ~~~~~~   18 (464)
                      |+++++
T Consensus         9 i~~i~l   14 (130)
T PF12273_consen    9 IVAILL   14 (130)
T ss_pred             HHHHHH
Confidence            333333


No 35 
>PF15050 SCIMP:  SCIMP protein
Probab=53.02  E-value=15  Score=27.27  Aligned_cols=16  Identities=38%  Similarity=0.285  Sum_probs=10.3

Q ss_pred             CCCCCCC-CCCccccch
Q 012417           49 GQLPLGT-LGWPIVGES   64 (464)
Q Consensus        49 ~~~Ppgp-~~~p~lG~~   64 (464)
                      ..+||.| ++.+..|+.
T Consensus        67 ~~LPpLPPRg~~s~~~~   83 (133)
T PF15050_consen   67 VQLPPLPPRGSPSPEDS   83 (133)
T ss_pred             CCCCCCCCCCCCCcccc
Confidence            4566654 467888876


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=51.13  E-value=56  Score=20.07  Aligned_cols=42  Identities=17%  Similarity=0.191  Sum_probs=34.5

Q ss_pred             HHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 012417          292 LIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDEN  333 (464)
Q Consensus       292 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  333 (464)
                      ++...+..++-.|.|-.+..++-.+...--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            556677777888888888888888888889999888887775


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.03  E-value=17  Score=23.22  Aligned_cols=23  Identities=30%  Similarity=0.523  Sum_probs=17.7

Q ss_pred             HHHHHHhcCHHHHHHHHHHHHHH
Q 012417          314 LAVKYLSDYPAALQQLTDENIKL  336 (464)
Q Consensus       314 ~~l~~L~~~p~~~~~l~~Ei~~~  336 (464)
                      -.+.+|..||++.+++.+.-.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asL   26 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASL   26 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeE
Confidence            35789999999999997654333


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=49.62  E-value=12  Score=31.26  Aligned_cols=43  Identities=28%  Similarity=0.369  Sum_probs=30.7

Q ss_pred             ChhHHHHHhhhhcCCCCccCcccccccCccccCeEeCCCCEEec
Q 012417          355 LPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFA  398 (464)
Q Consensus       355 lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~  398 (464)
                      -..+.|||.|++-..... .+-=+..+|+.++|..|||||.|+.
T Consensus        52 ~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            345678999998664322 2223456799999999999998765


No 39 
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=44.41  E-value=46  Score=20.77  Aligned_cols=26  Identities=8%  Similarity=0.087  Sum_probs=12.4

Q ss_pred             CcchHHHHHHHhhHHHHHHHHHHHhc
Q 012417            1 MDNLLLILFLTAAASFFSTLILYLRS   26 (464)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~   26 (464)
                      |+.+.+.+.+.++++++.+..++|..
T Consensus         1 M~il~~LIpiSl~l~~~~l~~f~Wav   26 (51)
T TIGR00847         1 MEILTILIPISLLLGGVGLVAFLWSL   26 (51)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55454444444444444444444444


No 40 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=43.68  E-value=55  Score=20.43  Aligned_cols=34  Identities=21%  Similarity=0.199  Sum_probs=23.9

Q ss_pred             HHHHHhcCCeeEeecCCcc----EEEecChHHHHHHHh
Q 012417           81 DKRRCMYGKVFKSHIFGTP----TIVSTDAEVSKFVLQ  114 (464)
Q Consensus        81 ~~~~~kyG~i~~~~~~~~~----~v~v~~~~~i~~vl~  114 (464)
                      .++.++||+|-.+.+....    +|-..+++.++.+..
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            4667899999988875543    444578888887765


No 41 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=43.62  E-value=11  Score=23.51  Aligned_cols=10  Identities=50%  Similarity=1.065  Sum_probs=8.5

Q ss_pred             ccCCCCCCCc
Q 012417          434 PFGGGQRLCP  443 (464)
Q Consensus       434 ~Fg~G~r~C~  443 (464)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            5999999984


No 42 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=43.59  E-value=1.1e+02  Score=21.48  Aligned_cols=51  Identities=14%  Similarity=0.087  Sum_probs=42.6

Q ss_pred             CCHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 012417          288 LTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTDENIKLKE  338 (464)
Q Consensus       288 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  338 (464)
                      .+.+.........++-=+..++..+.-.+.+.++||+..+++.+.+..-+.
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            355566666777888889999999999999999999999999998877654


No 43 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=39.53  E-value=1.1e+02  Score=29.43  Aligned_cols=46  Identities=17%  Similarity=0.239  Sum_probs=25.8

Q ss_pred             hHHHHHHHH-HhcCCeeEeecCCccEEEecChHHHHHHHhcCCcccc
Q 012417           76 PESFMDKRR-CMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFV  121 (464)
Q Consensus        76 ~~~~~~~~~-~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~~~~f~  121 (464)
                      |...++-.. -+||.|+.-.+-++.+-|=.=|+.-++=+.++...|+
T Consensus       211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             chhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            444554444 4889999887766554443334444444444445554


No 44 
>PF00558 Vpu:  Vpu protein;  InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=39.43  E-value=35  Score=23.66  Aligned_cols=23  Identities=9%  Similarity=0.420  Sum_probs=7.0

Q ss_pred             CcchHHHHHHHhhHHHHHHHHHH
Q 012417            1 MDNLLLILFLTAAASFFSTLILY   23 (464)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~   23 (464)
                      |.++..+.+.+++++++++++++
T Consensus         1 M~~l~i~~iialiv~~iiaIvvW   23 (81)
T PF00558_consen    1 MQSLEILAIIALIVALIIAIVVW   23 (81)
T ss_dssp             -------HHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHH
Confidence            34443334444444444444444


No 45 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=36.37  E-value=1e+02  Score=22.59  Aligned_cols=61  Identities=16%  Similarity=-0.058  Sum_probs=39.6

Q ss_pred             CCCCCCCCCCCccccchHHHhhhhccCChHHHHHHHHHhcCCeeEeecCCc------cEEEecChHHHHHHHhc
Q 012417           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGT------PTIVSTDAEVSKFVLQS  115 (464)
Q Consensus        48 ~~~~Ppgp~~~p~lG~~~~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~------~~v~v~~~~~i~~vl~~  115 (464)
                      ...+||--..+-++-|++.=       -..+-+-++.-+||+|..+++|..      -+||-.|-..++....+
T Consensus        10 ~~rlppevnriLyirNLp~~-------ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   10 NIRLPPEVNRILYIRNLPFK-------ITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCCChhhheeEEEecCCcc-------ccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            34556655555566665432       233556688899999999998753      45666777777766544


No 46 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=30.59  E-value=49  Score=20.85  Aligned_cols=17  Identities=24%  Similarity=0.245  Sum_probs=15.1

Q ss_pred             cCCeeEeecCCccEEEe
Q 012417           87 YGKVFKSHIFGTPTIVS  103 (464)
Q Consensus        87 yG~i~~~~~~~~~~v~v  103 (464)
                      -|+|++++.+|+.++|.
T Consensus         3 ~GDvV~LKSGGp~MTV~   19 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVT   19 (53)
T ss_pred             CCCEEEEccCCCCeEEE
Confidence            38999999999998886


No 47 
>PRK06789 flagellar motor switch protein; Validated
Probab=28.20  E-value=48  Score=22.60  Aligned_cols=40  Identities=10%  Similarity=0.034  Sum_probs=30.7

Q ss_pred             HHhhhhcCCCCcc-CcccccccC--ccccCeEeCCCCEEeccc
Q 012417          361 VITETLRMGNIII-GVMRKAMRD--IEIKGYLIPKGWCFFAYF  400 (464)
Q Consensus       361 ~i~E~lRl~~~~~-~~~R~~~~d--~~i~g~~ip~G~~v~~~~  400 (464)
                      -++|.+.+.+... .+-|.+.++  +.++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            4788899987665 556777774  555899999999998753


No 48 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=27.78  E-value=38  Score=25.76  Aligned_cols=22  Identities=41%  Similarity=0.462  Sum_probs=18.0

Q ss_pred             cccccCccccCeEeCCCCEEec
Q 012417          377 RKAMRDIEIKGYLIPKGWCFFA  398 (464)
Q Consensus       377 R~~~~d~~i~g~~ip~G~~v~~  398 (464)
                      -.+..|.+++|..||+|+.|..
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            3455699999999999999854


No 49 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=27.72  E-value=81  Score=18.24  Aligned_cols=20  Identities=15%  Similarity=0.255  Sum_probs=13.0

Q ss_pred             HHHHHHHHh-cCHHHHHHHHH
Q 012417          312 MTLAVKYLS-DYPAALQQLTD  331 (464)
Q Consensus       312 l~~~l~~L~-~~p~~~~~l~~  331 (464)
                      +-..+..++ +|||+++.++.
T Consensus        15 L~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   15 LQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHHhChhHHHHHHh
Confidence            334444455 79999888764


No 50 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=27.29  E-value=1.1e+02  Score=23.53  Aligned_cols=40  Identities=20%  Similarity=0.228  Sum_probs=30.7

Q ss_pred             ChHHHHHHHHHhcCCeeEeecCCccEEEecChHHHHHHHhcC
Q 012417           75 RPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSD  116 (464)
Q Consensus        75 ~~~~~~~~~~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~~  116 (464)
                      +....+++|.++||.+--..  +...+...|++.++++..++
T Consensus        75 ~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence            44578899999999876532  35567789999999998776


No 51 
>PF10189 DUF2356:  Conserved protein (DUF2356);  InterPro: IPR019333 The Integrator complex is involved in small nuclear RNA (snRNA) U1 and U2 transcription, and in their 3'-box-dependent processing. This complex associates with the C-terminal domain of RNA polymerase II largest subunit and is recruited to the U1 and U2 snRNAs genes []. This entry represents subunit 3 of this complex. The function of this subunit is unknown.
Probab=26.54  E-value=3.9e+02  Score=23.07  Aligned_cols=61  Identities=15%  Similarity=0.123  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHhhcCCCCChhhhcCChhHHHHHhhhhcC
Q 012417          308 VPVLMTLAVKYLSD-YPAALQQLTDENIKLKELKAQLGEPLSWSDYLSLPFTQNVITETLRM  368 (464)
Q Consensus       308 t~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~lp~L~a~i~E~lRl  368 (464)
                      |.+.+.+.+..+-. +|...++++.-+..++..--..+-..+.+-+-..|.|+-.++|.+|-
T Consensus       162 t~sLLeFL~~~v~~~~p~~~~~I~~gV~~a~~~i~~k~vv~sl~~l~~~~~ld~~lre~lr~  223 (230)
T PF10189_consen  162 TNSLLEFLCRIVENFDPPRRDRIRRGVRNAFRTIVEKGVVPSLSPLFDNPKLDPELRELLRE  223 (230)
T ss_pred             HHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHcCCcCChHHhcCCcccCHHHHHHHHH
Confidence            33444444433322 68888888888888765322234456777777888888888888874


No 52 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=25.92  E-value=37  Score=24.72  Aligned_cols=17  Identities=41%  Similarity=0.696  Sum_probs=14.4

Q ss_pred             CCCccccCCCCCCCccH
Q 012417          429 NSSFTPFGGGQRLCPGL  445 (464)
Q Consensus       429 ~~~~~~Fg~G~r~C~G~  445 (464)
                      ....+|||.|.-.|+|.
T Consensus       104 gss~~p~GaGaAaC~aA  120 (131)
T PF14459_consen  104 GSSNNPFGAGAAACFAA  120 (131)
T ss_pred             CcccCCcCccHHHHHHH
Confidence            45779999999999974


No 53 
>PRK00400 hisE phosphoribosyl-ATP pyrophosphatase; Validated
Probab=24.21  E-value=3e+02  Score=20.38  Aligned_cols=78  Identities=10%  Similarity=0.145  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCcchHHHHHHHccCCCCCCCHHHHHHHHHHHHhhccc--------cHHHHHHHHHHHHhc
Q 012417          250 ARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGED--------SVPVLMTLAVKYLSD  321 (464)
Q Consensus       250 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~ag~~--------tt~~~l~~~l~~L~~  321 (464)
                      ..-+.+.|..++++.     +..++...|++...   ..--+.+..++..++.|..+        -++-.+.+++..|..
T Consensus         5 l~~L~~~I~~Rk~~~-----~~~SYT~~L~~~G~---~ki~kKlgEEa~E~i~A~~~~d~~~~i~E~ADLlYHllVlL~~   76 (105)
T PRK00400          5 LERLAATIEERKGAD-----PEGSYTAKLLDKGL---DKILKKVGEEATEVVIAAKDGDREELVYEIADLLYHLLVLLAA   76 (105)
T ss_pred             HHHHHHHHHHHHhCC-----CCCcHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            344555666666544     35678888886510   00112333444444444322        124445556666666


Q ss_pred             CHHHHHHHHHHHHH
Q 012417          322 YPAALQQLTDENIK  335 (464)
Q Consensus       322 ~p~~~~~l~~Ei~~  335 (464)
                      +.--.+.+.+|+..
T Consensus        77 ~gv~~~dV~~eL~~   90 (105)
T PRK00400         77 RGISLEDVLAELER   90 (105)
T ss_pred             cCCCHHHHHHHHHH
Confidence            54445566666554


No 54 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=23.99  E-value=52  Score=27.74  Aligned_cols=20  Identities=25%  Similarity=0.222  Sum_probs=17.6

Q ss_pred             ccccCCCCCCCCCCCCCCCC
Q 012417          401 RSVHLDESNYEWPYQFNPWR  420 (464)
Q Consensus       401 ~~~~~d~~~~~~p~~F~P~R  420 (464)
                      +.-|.|+.+|.|...|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34499999999999999988


No 55 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=23.70  E-value=82  Score=24.87  Aligned_cols=39  Identities=18%  Similarity=0.307  Sum_probs=25.4

Q ss_pred             ccCccccCeEeCCCCEEeccc-------ccccCCCCCCCCCCCCCCC
Q 012417          380 MRDIEIKGYLIPKGWCFFAYF-------RSVHLDESNYEWPYQFNPW  419 (464)
Q Consensus       380 ~~d~~i~g~~ip~G~~v~~~~-------~~~~~d~~~~~~p~~F~P~  419 (464)
                      .+|+.++|..||+|+.-+...       ..+|++...|.. ..++|+
T Consensus        53 ~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~   98 (145)
T PF11138_consen   53 SKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS   98 (145)
T ss_pred             CCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence            469999999999998654432       224566666744 444544


No 56 
>PF08780 NTase_sub_bind:  Nucleotidyltransferase substrate binding protein like;  InterPro: IPR010235 The member of this family from Haemophilus influenzae, HI0074, has been shown by crystal structure to resemble nucleotidyltransferase substrate binding proteins []. It forms a complex with HI0073 (P43933 from SWISSPROT), encoded by the adjacent gene, which contains a nucleotidyltransferase nucleotide binding domain (IPR002934 from INTERPRO). Double- and single-stranded DNA binding assays showed no evidence of DNA binding to HI0074 or to HI0073/HI0074 complex despite the suggestive shape of the putative binding cleft formed by the HI0074 dimer []. ; PDB: 1WWP_A 1JOG_A 1WTY_C 2YWA_B.
Probab=22.93  E-value=2.6e+02  Score=21.40  Aligned_cols=56  Identities=9%  Similarity=0.070  Sum_probs=29.4

Q ss_pred             hHHHHHHHhcCCccccccchhHHHHhcCCCceeecCChhHHHH---HhhhhccCChHhHHH
Q 012417          106 AEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRI---HGLIGSFFKSADLKA  163 (464)
Q Consensus       106 ~~~i~~vl~~~~~~f~~~~~~~~~~~~g~~~~~~~~g~~~~~~---R~~~~~~~~~~~~~~  163 (464)
                      ..++|..|...+......+...+...+. .|++ .|++.|-.+   |..++..++.....+
T Consensus        44 WK~lK~~L~~~G~~~~~spr~~~r~A~~-~glI-~d~e~Wl~m~~~RN~tsHtYde~~a~~  102 (124)
T PF08780_consen   44 WKTLKDYLEYEGISECNSPRDVFREAFK-AGLI-DDGEIWLDMLEDRNLTSHTYDEETAEE  102 (124)
T ss_dssp             HHHHHHHHHHCTSSCCTSHHHHHHHHHH-TTSS-SHHHHHHHHHHHHHHGGGTTSHHHHHH
T ss_pred             HHHHHHHHHHhCCcccCCHHHHHHHHHH-cCCC-CCHHHHHHHHHHhccccCCCCHHHHHH
Confidence            3455555655543211122222233332 3555 677888766   667777777665554


No 57 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=22.63  E-value=2e+02  Score=19.99  Aligned_cols=60  Identities=17%  Similarity=0.154  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCChhhhc---CChhHHHHHhhhhcCCCCccCcc--cccccCccccCe
Q 012417          324 AALQQLTDENIKLKELKAQLGEPLSWSDYL---SLPFTQNVITETLRMGNIIIGVM--RKAMRDIEIKGY  388 (464)
Q Consensus       324 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~---~lp~L~a~i~E~lRl~~~~~~~~--R~~~~d~~i~g~  388 (464)
                      +.|+++.+.+.++-     .+...|+.++.   ..|---..|--+++-+|....++  |++..+=.++||
T Consensus         2 ~f~~~V~~~l~~IP-----~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRTIP-----YGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhCCC-----CCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            46778888877652     45668888876   33444455666777776554443  777777777776


No 58 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=22.53  E-value=78  Score=24.42  Aligned_cols=9  Identities=22%  Similarity=0.272  Sum_probs=3.4

Q ss_pred             HHhhHHHHH
Q 012417           10 LTAAASFFS   18 (464)
Q Consensus        10 ~~~~~~~~~   18 (464)
                      +++++.+++
T Consensus         9 i~~i~l~~~   17 (130)
T PF12273_consen    9 IVAILLFLF   17 (130)
T ss_pred             HHHHHHHHH
Confidence            333333333


No 59 
>PRK02302 hypothetical protein; Provisional
Probab=21.82  E-value=1.6e+02  Score=20.91  Aligned_cols=32  Identities=13%  Similarity=0.105  Sum_probs=23.3

Q ss_pred             HHhcCCeeEeecCCccEEEecChHHHHHHHhc
Q 012417           84 RCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQS  115 (464)
Q Consensus        84 ~~kyG~i~~~~~~~~~~v~v~~~~~i~~vl~~  115 (464)
                      -++||+|..+.-=.+-.++-+|-+.+.++..+
T Consensus        23 LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         23 LSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            47899999884433345566898999888765


No 60 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=21.35  E-value=1.9e+02  Score=16.95  Aligned_cols=15  Identities=27%  Similarity=0.344  Sum_probs=10.6

Q ss_pred             HHHHHHHHHHHHHHH
Q 012417          323 PAALQQLTDENIKLK  337 (464)
Q Consensus       323 p~~~~~l~~Ei~~~~  337 (464)
                      .|+.+.+|.|+..+-
T Consensus        10 qEIL~EvrkEl~K~K   24 (40)
T PF08776_consen   10 QEILEEVRKELQKVK   24 (40)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            467777777777764


No 61 
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.12  E-value=4.9e+02  Score=21.70  Aligned_cols=49  Identities=18%  Similarity=0.128  Sum_probs=38.6

Q ss_pred             CHHHHHHHHHHHHhhccccH--HHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 012417          289 TDDLIADNMIDMMIPGEDSV--PVLMTLAVKYLSDYPAALQQLTDENIKLK  337 (464)
Q Consensus       289 ~~~~i~~~~~~~~~ag~~tt--~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  337 (464)
                      +-.+++..+.+-.+|=+++=  -++..-++|.|-.+|+.+.+++++++.+-
T Consensus       129 s~~diakesYd~~lakhHsW~IRtAV~~amYtLPTR~~lL~~Lk~d~~~~~  179 (209)
T KOG4189|consen  129 SLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTLPTRPELLCRLKEDMDAAN  179 (209)
T ss_pred             hhhHHHHHHHHHhhhccccHHHHHHHHHHHHhCCCcHHHHHHHHhHHHHHH
Confidence            44567777777777777763  34677889999999999999999997753


No 62 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=20.85  E-value=2.7e+02  Score=19.44  Aligned_cols=37  Identities=8%  Similarity=0.074  Sum_probs=27.8

Q ss_pred             HHHHHHHHhcCCe---eEeecCCccEEEecCh-----HHHHHHHh
Q 012417           78 SFMDKRRCMYGKV---FKSHIFGTPTIVSTDA-----EVSKFVLQ  114 (464)
Q Consensus        78 ~~~~~~~~kyG~i---~~~~~~~~~~v~v~~~-----~~i~~vl~  114 (464)
                      +...+++.+|.++   ++|+.++.+.+.|.+.     +.+.+++.
T Consensus        24 EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq   68 (81)
T PRK10597         24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ   68 (81)
T ss_pred             HHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence            6678889999987   8999999888887443     55555543


No 63 
>PF10883 DUF2681:  Protein of unknown function (DUF2681);  InterPro: IPR020274 This entry contains membrane proteins with no known function.
Probab=20.73  E-value=1.2e+02  Score=21.54  Aligned_cols=17  Identities=12%  Similarity=0.280  Sum_probs=8.8

Q ss_pred             HHhhHHHHHHHHHHHhc
Q 012417           10 LTAAASFFSTLILYLRS   26 (464)
Q Consensus        10 ~~~~~~~~~~~~~~~~~   26 (464)
                      ++++++++++++.|++|
T Consensus         7 v~~~~~v~~~i~~y~~~   23 (87)
T PF10883_consen    7 VGGVGAVVALILAYLWW   23 (87)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            33444555555555555


No 64 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=20.61  E-value=68  Score=30.34  Aligned_cols=44  Identities=18%  Similarity=0.231  Sum_probs=31.3

Q ss_pred             ChhHHHHHhhhhcCCCCccCcccccccCccccCeEeCCCCEEecc
Q 012417          355 LPFTQNVITETLRMGNIIIGVMRKAMRDIEIKGYLIPKGWCFFAY  399 (464)
Q Consensus       355 lp~L~a~i~E~lRl~~~~~~~~R~~~~d~~i~g~~ip~G~~v~~~  399 (464)
                      -..+.|||.|++-+.-. ..+-=+..+|+.++|..||+||.|+..
T Consensus       255 ~n~I~A~V~~~qtv~~G-~~vrlRLle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDG-SAVKLRLLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecC-CEEEEEEcCceeeCCEEecCCCEEEEE
Confidence            34567999999876532 222234567999999999999987654


No 65 
>COG1270 CbiB Cobalamin biosynthesis protein CobD/CbiB [Coenzyme metabolism]
Probab=20.29  E-value=6.8e+02  Score=23.01  Aligned_cols=88  Identities=14%  Similarity=0.118  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCcchHHHHHHHccCCCCCCCHHHHHHHHHHHHh-hccccHHHHHHHHHHHHhcCH
Q 012417          245 AKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMI-PGEDSVPVLMTLAVKYLSDYP  323 (464)
Q Consensus       245 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~l~~~~i~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~p  323 (464)
                      +.+.+.+.+++..+.-+++.-+   ..+..++.+...  +.++++++++...+++-+. ...|.....+.|.+.. -.--
T Consensus        98 a~rsL~~~~~~v~~~L~~gdl~---~aR~~ls~iV~R--Dts~L~~~~i~~AaIES~aEN~~DgvvaPLF~~~v~-G~pg  171 (320)
T COG1270          98 AIRSLADHARKVARALRRGDLE---GARRALSMIVGR--DTSKLSEAEIASAAIESLAENLVDGVVAPLFWFLVG-GLPG  171 (320)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHH---HHHHHHHHHhcC--CcccCCHHHHHHHHHHHHHHhcccchHHHHHHHHHh-hhHH
Confidence            3445555555555444332211   245566666654  5667999999988887766 5667777778887665 2223


Q ss_pred             HHHHHHHHHHHHHHH
Q 012417          324 AALQQLTDENIKLKE  338 (464)
Q Consensus       324 ~~~~~l~~Ei~~~~~  338 (464)
                      -+.-|+-+.+|+.++
T Consensus       172 A~~YRaiNTlDsMvG  186 (320)
T COG1270         172 ALLYRAINTLDSMVG  186 (320)
T ss_pred             HHHHHHHHHHHHHhC
Confidence            366788899999876


Done!