Your job contains 1 sequence.
>012418
MAAVVSTVGAVNNALPLKINGSSRFSLVPSSVFLGKSLKKVSSKVSQQRILSKSFKVVSE
YDEEKQTSQDRWAGLAYDISDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISQGL
RQYSLDNTLDGLYIAPAFMDKVVVHITKNFLNLPNVKVPLILGIWGGKGQGKSFQCELVF
AKMGINGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMV
NATLMNIADNPTNVQLPGMYNQEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRE
DRIGVCSGIFRTDNVPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISEVGIERIG
KRLVNSKEGPPTFEQPKMTLDKLLEYGRMLVQEQENVKRVQLADKYLSEAALGDANDDAI
KNGSFYGKAAQQVKVPVPEGCTDPAAANYDPTARSDDGSCNYQF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012418
(464 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2063922 - symbol:RCA "rubisco activase" specie... 1872 3.1e-193 1
TAIR|locus:2032687 - symbol:AT1G73110 species:3702 "Arabi... 776 4.3e-77 1
>TAIR|locus:2063922 [details] [associations]
symbol:RCA "rubisco activase" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=IEA;IDA] [GO:0009507
"chloroplast" evidence=ISM;IDA;NAS] [GO:0030234 "enzyme regulator
activity" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0010287 "plastoglobule" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0043531 "ADP binding" evidence=IDA]
[GO:0046863 "ribulose-1,5-bisphosphate carboxylase/oxygenase
activator activity" evidence=IDA] [GO:0009409 "response to cold"
evidence=IEP;RCA] [GO:0010319 "stromule" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP;RCA] [GO:0016020
"membrane" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0010150 "leaf senescence" evidence=IMP] [GO:0000165 "MAPK
cascade" evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009637 "response to blue light" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010114 "response to red light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0010200
"response to chitin" evidence=RCA] [GO:0010218 "response to far red
light" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0019684
"photosynthesis, light reaction" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] [GO:0009416 "response to
light stimulus" evidence=IEP] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 GO:GO:0005634 GO:GO:0005618 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009753 GO:GO:0048046 GO:GO:0009409
GO:GO:0042742 GO:GO:0009941 GO:GO:0043531 GO:GO:0010150
GO:GO:0009416 GO:GO:0009535 GO:GO:0010287 GO:GO:0010319
EMBL:AC003000 UniGene:At.25263 EMBL:X14212 EMBL:M86720
EMBL:AY052703 EMBL:AF325049 EMBL:AY056108 EMBL:BT000710
EMBL:AY088487 IPI:IPI00518163 IPI:IPI00526733 PIR:S04048 PIR:T01002
PIR:T01003 RefSeq:NP_565913.1 RefSeq:NP_850320.1 UniGene:At.25299
UniGene:At.25319 UniGene:At.47493 ProteinModelPortal:P10896
SMR:P10896 IntAct:P10896 STRING:P10896 SWISS-2DPAGE:P10896
World-2DPAGE:0003:P10896 PaxDb:P10896 PRIDE:P10896 ProMEX:P10896
EnsemblPlants:AT2G39730.1 GeneID:818558 KEGG:ath:AT2G39730
TAIR:At2g39730 eggNOG:NOG316327 HOGENOM:HOG000243931
InParanoid:P10896 OMA:HIAKNFM PhylomeDB:P10896 ProtClustDB:PLN00020
Genevestigator:P10896 GO:GO:0046863 Uniprot:P10896
Length = 474
Score = 1872 (664.0 bits), Expect = 3.1e-193, P = 3.1e-193
Identities = 360/476 (75%), Positives = 398/476 (83%)
Query: 1 MAAVVSTVGAVNNALPLKINGSSRFSL-VPXXXXXXXXXXXXXXXXXQQRILSKSFKVVS 59
MAA VSTVGA+N A PL +NGS ++ P + + SFKV++
Sbjct: 1 MAAAVSTVGAINRA-PLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA 59
Query: 60 EYDEEKQTSQDRWAGLAYDISDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISQG 119
E+KQT DRW GLAYD SDDQQDITRGKGMVD++FQAPM +GTH+AV+SSY+Y+SQG
Sbjct: 60 -VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQG 118
Query: 120 LRQYSLDNTLDGLYIAPAFMDKVVVHITKNFLNLPNVKVPLILGIWGGKGQGKSFQCELV 179
LRQY+LDN +DG YIAPAFMDK+VVHITKNFL LPN+KVPLILGIWGGKGQGKSFQCELV
Sbjct: 119 LRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELV 178
Query: 180 FAKMGIN-----------GNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMG 228
AKMGIN GNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMG
Sbjct: 179 MAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMG 238
Query: 229 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNQEENPRVPIIVTGNDFSTLYAPLIRDG 288
GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYN+EEN RVPII TGNDFSTLYAPLIRDG
Sbjct: 239 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDG 298
Query: 289 RMEKFYWAPTREDRIGVCSGIFRTDNVPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVR 348
RMEKFYWAPTREDRIGVC GIFRTD + EDIV LVD FPGQSIDFFGALRARVYDDEVR
Sbjct: 299 RMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVR 358
Query: 349 KWISEVGIERIGKRLVNSKEGPPTFEQPKMTLDKLLEYGRMLVQEQENVKRVQLADKYLS 408
K++ +G+E+IGKRLVNS+EGPP FEQP+MT +KL+EYG MLV EQENVKRVQLA+ YLS
Sbjct: 359 KFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLS 418
Query: 409 EAALGDANDDAIKNGSFYGKAAQQVKVPVPEGCTDPAAANYDPTARSDDGSCNYQF 464
+AALGDAN DAI G+FYGK AQQV +PVPEGCTDP A N+DPTARSDDG+C Y F
Sbjct: 419 QAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474
>TAIR|locus:2032687 [details] [associations]
symbol:AT1G73110 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
InterPro:IPR003959 Pfam:PF00004 EMBL:CP002684 GO:GO:0005524
GO:GO:0009535 HOGENOM:HOG000243931 ProtClustDB:PLN00020
UniGene:At.11687 UniGene:At.43232 EMBL:AF361834 EMBL:AY078044
EMBL:AK118942 IPI:IPI00532099 RefSeq:NP_177454.1
ProteinModelPortal:Q9AST9 SMR:Q9AST9 STRING:Q9AST9 PRIDE:Q9AST9
ProMEX:Q9AST9 EnsemblPlants:AT1G73110.1 GeneID:843642
KEGG:ath:AT1G73110 TAIR:At1g73110 InParanoid:Q9AST9 OMA:VEPVIMS
PhylomeDB:Q9AST9 Genevestigator:Q9AST9 Uniprot:Q9AST9
Length = 432
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 164/346 (47%), Positives = 226/346 (65%)
Query: 82 DQQDITRG--KGMVDTLFQAPMESGTHYAVMSSYDYISQGLRQYSLDNTLDGLYIAPAFM 139
D +I G GM+D +F G ++ +DY + R S ++ YIAP+F+
Sbjct: 89 DNVNIAVGARSGMIDDVFIGDF-LGKDSDIV--FDYRQKATR--SFEHLQGDYYIAPSFL 143
Query: 140 DKVVVHITKNFLNLP--NVKVPLILGIWGGKGQGKSFQCELVFAKMGI-----------N 186
DKV VHI KN+L P N+K+PLILGIWGGKGQGK+FQ EL+F MG+ +
Sbjct: 144 DKVAVHIVKNYL-APSLNIKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELES 202
Query: 187 GNAGEPAKLIRQRYREAADIIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLM 245
AGEP +LIR RYR A+ +I+ +GKM L IND+DAG GR G TQ TVNNQ+V TLM
Sbjct: 203 DRAGEPGRLIRDRYRTASQVIQNQGKMSVLMINDIDAGLGRFG-ETQMTVNNQIVVGTLM 261
Query: 246 NIADNPTNVQLPGMYNQEENP-RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIG 304
N+ADNPT V + + + + RVP+IVTGNDFSTLYAPLIR+GRMEKFYW PTRED +
Sbjct: 262 NLADNPTRVSVGQEWREADMVNRVPLIVTGNDFSTLYAPLIREGRMEKFYWQPTREDIVN 321
Query: 305 VCSGIFRTDNVPKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISEVG-IERIGKRL 363
+ S ++ D + ++D++ +VD FP Q++DF+GALR+R YD + KW+ E G +E +GK L
Sbjct: 322 IVSRMYEKDGISRKDVISIVDKFPNQALDFYGALRSRTYDRSILKWVDEAGGMETLGKVL 381
Query: 364 VNSKEGP--PTFEQPKMTLDKLLEYGRMLVQEQENVKRVQLADKYL 407
+ K+ P F P+ T++ LLE G L+ EQ+ + +L+ +Y+
Sbjct: 382 LRRKKTQEVPQFTAPEQTVEALLESGYSLINEQKLIMETKLSKEYM 427
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 464 447 0.00091 118 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 610 (65 KB)
Total size of DFA: 260 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.79u 0.13s 35.92t Elapsed: 00:00:01
Total cpu time: 35.79u 0.13s 35.92t Elapsed: 00:00:01
Start: Fri May 10 12:12:22 2013 End: Fri May 10 12:12:23 2013