Query 012419
Match_columns 464
No_of_seqs 373 out of 2976
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 09:05:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012419.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012419hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b87_A DNA cross-LINK repair 1 100.0 1E-54 3.4E-59 444.2 36.2 340 118-460 26-365 (367)
2 3iek_A Ribonuclease TTHA0252; 100.0 2.9E-47 9.8E-52 397.6 33.8 332 111-456 21-416 (431)
3 2i7t_A Cleavage and polyadenyl 100.0 5.5E-45 1.9E-49 383.3 33.7 338 111-458 32-436 (459)
4 3zdk_A 5' exonuclease apollo; 100.0 2.7E-43 9.3E-48 355.5 29.0 290 125-444 6-304 (336)
5 3af5_A Putative uncharacterize 100.0 9.1E-43 3.1E-47 380.7 33.3 338 111-456 209-634 (651)
6 2xr1_A Cleavage and polyadenyl 100.0 5E-42 1.7E-46 374.0 36.1 337 111-456 204-623 (640)
7 2ycb_A Beta-CAsp RNAse, cleava 100.0 3.1E-42 1.1E-46 375.7 33.3 339 111-456 200-619 (636)
8 3zq4_A Ribonuclease J 1, RNAse 100.0 2.2E-38 7.5E-43 339.7 28.3 328 111-452 29-402 (555)
9 3bk2_A RNAse J, metal dependen 100.0 2.2E-36 7.5E-41 325.2 30.1 331 111-454 37-419 (562)
10 2az4_A Hypothetical protein EF 100.0 2.2E-31 7.5E-36 277.1 26.6 280 140-445 81-409 (429)
11 2i7x_A Protein CFT2; polyadeny 100.0 3.4E-31 1.2E-35 291.1 21.0 274 111-396 22-381 (717)
12 2wyl_A L-ascorbate-6-phosphate 99.8 9.7E-19 3.3E-23 177.8 16.7 200 56-262 16-251 (360)
13 1zkp_A Hypothetical protein BA 99.8 4.4E-19 1.5E-23 172.4 13.2 194 111-322 50-260 (268)
14 3bv6_A Metal-dependent hydrola 99.8 2.1E-18 7E-23 176.7 13.9 198 58-262 42-276 (379)
15 2e7y_A TRNAse Z; tRNA maturati 99.8 1.7E-18 5.8E-23 168.6 10.1 176 103-302 9-247 (280)
16 2cbn_A Ribonuclease Z; phospho 99.7 4.6E-18 1.6E-22 168.1 12.2 144 112-265 32-239 (306)
17 3g1p_A Protein PHNP; C-P lyase 99.7 4.9E-18 1.7E-22 164.5 10.8 143 111-266 46-194 (258)
18 1y44_A Ribonuclease Z; zinc-de 99.7 4.9E-18 1.7E-22 169.2 10.9 144 112-265 30-237 (320)
19 3md7_A Beta-lactamase-like; ss 99.6 5.6E-16 1.9E-20 152.9 12.7 165 114-302 78-265 (293)
20 3zwf_A Zinc phosphodiesterase 99.6 8.5E-17 2.9E-21 164.1 6.0 145 111-265 26-279 (368)
21 3kl7_A Putative metal-dependen 99.6 3.8E-15 1.3E-19 142.5 15.9 191 72-321 26-231 (235)
22 3jxp_A Coenzyme PQQ synthesis 99.6 1.2E-15 4E-20 152.8 8.0 149 112-264 49-227 (321)
23 3rpc_A Possible metal-dependen 99.6 2.3E-14 7.7E-19 139.2 13.8 115 143-264 64-195 (264)
24 2r2d_A AGR_PTI_140P, Zn-depend 99.4 5.6E-13 1.9E-17 129.3 11.0 99 142-241 102-219 (276)
25 1e5d_A Rubredoxin\:oxygen oxid 99.4 2.4E-13 8.2E-18 139.2 6.4 121 112-238 42-168 (402)
26 3m8t_A 'BLR6230 protein; subcl 99.4 3.6E-13 1.2E-17 131.8 6.9 126 111-239 62-206 (294)
27 3hnn_A Putative diflavin flavo 99.4 1.4E-13 4.7E-18 133.4 3.8 120 112-236 50-175 (262)
28 1k07_A FEZ-1 beta-lactamase; m 99.4 5.1E-13 1.7E-17 129.0 7.6 127 111-238 32-177 (263)
29 2ohh_A Type A flavoprotein FPR 99.3 1.2E-12 4.3E-17 134.0 8.3 121 111-237 42-172 (404)
30 1ycg_A Nitric oxide reductase; 99.3 1.3E-12 4.5E-17 133.5 7.8 129 103-237 33-168 (398)
31 3dha_A N-acyl homoserine lacto 99.3 4E-12 1.4E-16 121.9 9.7 97 142-241 99-201 (254)
32 2bib_A CBPE, teichoic acid pho 99.3 1.8E-12 6.1E-17 138.7 7.1 192 111-323 25-281 (547)
33 1vjn_A Zn-dependent hydrolase 99.3 1.9E-11 6.4E-16 115.7 12.4 114 111-261 27-147 (220)
34 4ax1_B Metallo-beta-lactamase 99.3 6.7E-12 2.3E-16 123.0 9.1 125 111-238 65-209 (303)
35 3l6n_A Metallo-beta-lactamase; 99.3 1.7E-12 5.8E-17 121.6 4.6 121 111-238 38-161 (219)
36 1sml_A Protein (penicillinase) 99.2 1E-11 3.5E-16 120.2 8.5 125 111-238 45-187 (269)
37 3esh_A Protein similar to meta 99.2 6.6E-12 2.2E-16 122.5 6.8 126 111-241 55-212 (280)
38 3adr_A Putative uncharacterize 99.2 1E-11 3.5E-16 119.3 7.9 114 112-239 28-169 (261)
39 2xf4_A Hydroxyacylglutathione 99.2 2.3E-12 8E-17 119.9 3.1 119 112-239 23-155 (210)
40 2q9u_A A-type flavoprotein; fl 99.2 5.8E-12 2E-16 129.7 6.2 121 112-238 48-174 (414)
41 4efz_A Metallo-beta-lactamase 99.2 7E-12 2.4E-16 123.7 6.0 127 112-240 27-179 (298)
42 4dik_A Flavoprotein; TM0755, e 99.2 2.5E-11 8.7E-16 125.2 9.8 144 78-237 27-182 (410)
43 1ztc_A Hypothetical protein TM 99.2 2.9E-12 9.8E-17 120.9 2.0 127 111-240 42-179 (221)
44 3aj3_A MLR6805 protein, 4-pyri 99.2 9.2E-12 3.2E-16 120.7 5.1 95 142-240 87-212 (274)
45 1p9e_A Methyl parathion hydrol 99.2 1.8E-11 6.3E-16 122.6 6.5 126 111-240 104-260 (331)
46 2gcu_A Putative hydroxyacylglu 99.1 9E-12 3.1E-16 119.7 2.3 112 113-239 28-146 (245)
47 1m2x_A Class B carbapenemase B 99.1 1.6E-11 5.4E-16 115.5 3.8 121 111-239 34-158 (223)
48 2zwr_A Metallo-beta-lactamase 99.1 1.2E-11 4E-16 115.2 2.3 116 111-239 20-148 (207)
49 2vw8_A PA1000, PQSE; quinolone 99.1 1.7E-11 5.9E-16 120.8 2.6 123 112-238 33-183 (303)
50 3tp9_A Beta-lactamase and rhod 99.1 1.3E-11 4.5E-16 129.6 1.8 121 111-239 25-153 (474)
51 2p18_A Glyoxalase II; metallop 99.1 5.1E-11 1.7E-15 118.6 5.8 89 142-239 83-184 (311)
52 2zo4_A Metallo-beta-lactamase 99.1 4.7E-11 1.6E-15 118.1 5.2 125 111-239 29-194 (317)
53 4ad9_A Lactb2, beta-lactamase- 99.1 1.4E-11 4.9E-16 120.5 1.4 123 111-238 39-168 (289)
54 1qh5_A Glyoxalase II, protein 99.1 5.3E-11 1.8E-15 115.4 5.2 110 113-239 23-138 (260)
55 2qed_A Hydroxyacylglutathione 99.1 3.5E-11 1.2E-15 116.5 3.8 107 112-239 28-138 (258)
56 3r2u_A Metallo-beta-lactamase 99.1 1.7E-11 5.8E-16 128.6 1.5 121 112-240 47-174 (466)
57 4hl2_A Beta-lactamase NDM-1; s 99.1 5.9E-12 2E-16 120.1 -2.7 124 111-239 55-185 (243)
58 1a7t_A Metallo-beta-lactamase; 99.0 3.9E-10 1.3E-14 106.7 6.5 122 111-239 44-168 (232)
59 1xm8_A Glyoxalase II; structur 99.0 1.6E-10 5.3E-15 111.7 3.7 110 113-239 23-135 (254)
60 3q6v_A Beta-lactamase; metallo 99.0 7E-11 2.4E-15 111.3 1.1 123 111-239 33-172 (233)
61 1jjt_A IMP-1 metallo beta-lact 99.0 8.1E-11 2.8E-15 111.2 0.4 119 111-238 40-161 (228)
62 1mqo_A Beta-lactamase II; alph 98.9 6.6E-10 2.2E-14 104.7 6.4 122 111-239 48-172 (227)
63 3iog_A Beta-lactamase; hydrola 98.9 1.2E-10 4.2E-15 109.2 0.6 120 111-238 30-168 (227)
64 2fhx_A SPM-1; metallo-beta-lac 98.9 1.8E-09 6.3E-14 102.6 7.4 121 113-239 40-188 (246)
65 2y8b_A Metallo-B-lactamase; hy 98.9 3.3E-09 1.1E-13 102.7 7.7 121 111-239 75-201 (265)
66 2cfu_A SDSA1; SDS-hydrolase, l 98.7 7E-09 2.4E-13 113.1 6.5 124 111-239 130-303 (658)
67 4eyb_A Beta-lactamase NDM-1; m 98.7 5.9E-10 2E-14 108.3 -2.2 124 111-239 82-212 (270)
68 2yhe_A SEC-alkyl sulfatase; hy 98.0 6.8E-09 2.3E-13 113.1 0.0 123 111-238 140-313 (668)
69 2p97_A Hypothetical protein; p 98.4 1.2E-08 4.3E-13 94.3 -1.9 109 111-239 31-141 (201)
70 2p4z_A Metal-dependent hydrola 98.3 3.6E-07 1.2E-11 89.3 3.6 63 111-177 40-105 (284)
71 3h3e_A Uncharacterized protein 97.2 9.6E-05 3.3E-09 71.5 2.2 62 106-176 32-93 (267)
72 2i7x_A Protein CFT2; polyadeny 78.2 1.3 4.4E-05 48.4 3.7 49 405-455 652-700 (717)
73 3rpc_A Possible metal-dependen 44.1 22 0.00075 33.0 4.7 26 414-439 202-227 (264)
74 3kl7_A Putative metal-dependen 40.9 10 0.00035 34.9 1.7 39 413-453 184-222 (235)
75 2wyl_A L-ascorbate-6-phosphate 33.5 33 0.0011 33.4 4.3 25 414-438 257-281 (360)
76 3h3e_A Uncharacterized protein 30.2 37 0.0013 32.0 3.8 41 410-452 206-249 (267)
77 3bv6_A Metal-dependent hydrola 29.3 37 0.0013 33.5 3.8 25 414-438 282-306 (379)
78 1vjn_A Zn-dependent hydrolase 27.5 46 0.0016 30.0 3.8 27 414-440 149-175 (220)
79 2e7y_A TRNAse Z; tRNA maturati 26.6 62 0.0021 29.6 4.7 30 413-444 219-248 (280)
80 2cbn_A Ribonuclease Z; phospho 22.5 73 0.0025 29.7 4.3 29 413-441 246-274 (306)
81 1zkp_A Hypothetical protein BA 22.0 72 0.0024 29.2 4.1 25 414-438 211-235 (268)
82 3md7_A Beta-lactamase-like; ss 21.5 85 0.0029 29.3 4.6 30 412-441 236-265 (293)
83 2kw6_A Cyclin-dependent kinase 21.0 47 0.0016 24.2 1.9 47 413-461 7-53 (65)
84 2p4z_A Metal-dependent hydrola 20.2 76 0.0026 29.7 3.9 25 418-442 235-259 (284)
No 1
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=100.00 E-value=1e-54 Score=444.18 Aligned_cols=340 Identities=51% Similarity=0.947 Sum_probs=299.3
Q ss_pred EcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccCCCCcEEeCHHHHHHHHHhhccCCCceEEcCCCC
Q 012419 118 RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNT 197 (464)
Q Consensus 118 idcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~~~~~~~~v~~~~ 197 (464)
..|++.+..+|.++.||.|++..+.+||+|||||+|.||++|++. ..+++||+++.|.++++..++.....+++++.++
T Consensus 26 ~~~p~~~~~pG~~ilVD~f~~~~~~~IdaI~lTH~H~DHiggl~~-~~~~pIy~s~~t~~ll~~~l~~~~~~~~~l~~g~ 104 (367)
T 4b87_A 26 KTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSK-HFTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDT 104 (367)
T ss_dssp CCCCGGGBCTTSSEEESCCSSSSCTTCCEEECCCCCHHHHTTCST-TCCSCEEECHHHHHHHHHHSCCCGGGEEECCBTS
T ss_pred CCCceEEEECCCeEEEeCCCcCCccCCcEEEECcChHHHhCCccc-ccCCcEEECHHHHHHHHHHhccccceEEEeCCCC
Confidence 678888878898999999998778899999999999999999995 4578999999999999887776556789999999
Q ss_pred EEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCCccccccccccCCCccEEEEeCCCCCCCCCCCCHHHHHH
Q 012419 198 EHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLN 277 (464)
Q Consensus 198 ~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~EsT~~~~~~~~p~~~~~~~ 277 (464)
++.+++++|+++++||++|+++|+|+.++|++++||||++..+.... +.+...++|+||+||||+++.+.+|++++..+
T Consensus 105 ~~~ig~~~v~~~~agH~~gs~~~~i~~~~g~~il~tGD~~~~~~~~~-~~l~~~~~D~Li~EsTy~~~~~~~ps~~~~~~ 183 (367)
T 4b87_A 105 ECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSMER-SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIR 183 (367)
T ss_dssp CEEETTEEEEEEECSSSTTCEEEEEECTTSCEEEECCSCCCCGGGGG-SGGGTSCCCEEEECCTTCSTTCCCCCHHHHHH
T ss_pred EEEECCEEEEEEeCCCcCCcEEEEEEcCCCcEEEEecCcccCcccch-hhhccCCCCEEEEecccCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999767778999999999887653 44444689999999999998888899999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEecccccHHHHHHHHHHHcCCeEEEcccHHHHHHhcCCCccccCccccCCCceEEEEeCCC
Q 012419 278 YVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMSS 357 (464)
Q Consensus 278 ~l~~~i~~~l~~~~~~~vli~~~s~Gr~qell~l~~~~~~~I~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~V~v~~~~~ 357 (464)
++++.+.+.++.+++.+|++++|++||+|+++++++++|+||++++.++++++.++++++...+++++.++.|++++...
T Consensus 184 ~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ia~~~g~ki~v~~~~~~il~~l~~~~~~~~~t~d~~~~~vh~~~~~~ 263 (367)
T 4b87_A 184 FAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQ 263 (367)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHHHHHHTTCCEECCHHHHHHHHTTCCTTHHHHEESCGGGCSEEEEEGGG
T ss_pred HHHHHHHHHHHhCCCeEEEEccchhHHHHHHHHHHHHhCCEEEEeHHHHHHHHhcCCchhhhhcccCCccceEEEeecCc
Confidence 89988888888888888889999999999999999999999999999999999999988777788888899999999999
Q ss_pred CChhhHHHHHhhhCCCCCCEEEEeeccccccCCccccccccccCCCCCEEEEeEeccCCCCHHHHHHHHHhcCCCeEEEe
Q 012419 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQFLRPDKIIPT 437 (464)
Q Consensus 358 l~~g~~~~~l~~~~~~~~~~i~~~~tG~~~~~~~g~~l~~~~~~~~g~~~i~~i~~S~Had~~eL~~~v~~l~Pk~ViP~ 437 (464)
++.+.+..|++++.++++.++.|+||||...... ..+..+.|..++++.+|.+|||+|||+.||++||+.++|++||||
T Consensus 264 ~~~~~l~~~~~~~~~~~~~~v~~~ptgw~~~~~~-~~~~~~~~~~~~~~~~~~vpySeHss~~EL~~fv~~l~p~~iipt 342 (367)
T 4b87_A 264 INFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKF-TRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPT 342 (367)
T ss_dssp CSHHHHHHHHHSGGGCCCEEEEEEECC-----------CCCCCEEETTEEEEEECCCSSCCHHHHHHHHHHHCCSEEEEC
T ss_pred CCHHHHHHHHHHhhcccccEEEEcCcccccCCCC-CcccccccccCCceEEEEEeccCCCCHHHHHHHHHhcCCCeEECe
Confidence 9999999999999999999999999999876432 123334566678899999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHhhh
Q 012419 438 VNVWNAASREKMQSFFREWLSCK 460 (464)
Q Consensus 438 ~~hg~~~~~~~l~~~l~~~l~~~ 460 (464)
|+-|+++++++|+++|++|..|-
T Consensus 343 v~~~~~~~~~~m~~~~~~w~~~~ 365 (367)
T 4b87_A 343 VNVGTWKSRSTMEKYFREWKLEA 365 (367)
T ss_dssp SSCSSHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999874
No 2
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=100.00 E-value=2.9e-47 Score=397.60 Aligned_cols=332 Identities=17% Similarity=0.241 Sum_probs=262.4
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccc---cCCCCcEEeCHHHHHHHHHhhcc--
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK---RWSHGPIYCSPLTARLVRMCLLV-- 185 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~---~~~~~~Iy~s~~t~~~l~~~~~~-- 185 (464)
.++..+++|||..... .....+..+.. ...+||+|||||+|.||+||+|. .+++++||+++.|.++++..+..
T Consensus 21 ~~~~~iLID~G~~~~~-~~~~~~~~~~~-~~~~Id~VllTH~H~DH~gglp~l~~~~~~~~Iy~t~~t~~l~~~~l~d~~ 98 (431)
T 3iek_A 21 AGGRRVLLDCGMFQGK-EEARNHAPFGF-DPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRATVLLMEIVLEDAL 98 (431)
T ss_dssp ETTEEEEECCCCCCGG-GGGGGGSCCSS-CGGGCCEEECSCCCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCcch-hhccchhhcCC-CcccCCEEEECCCChHHhccHHHHHHcCCCCeEEEcHHHHHHHHHHHHHHH
Confidence 6788999999984321 10011112211 23789999999999999999996 34678999999999887754321
Q ss_pred --CC-------------CceEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCCccccc-ccccc
Q 012419 186 --NP-------------SYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQS-YPLLV 249 (464)
Q Consensus 186 --~~-------------~~~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~~~~~~-~~~l~ 249 (464)
.. ..++++++++++.+++++|+++++||++|+++|.++. ++++++||||++....... .+. .
T Consensus 99 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~Gs~~~~i~~-~~~~ilfsGD~~~~~~~~l~~~~-~ 176 (431)
T 3iek_A 99 KVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLPGSAFVVAQG-EGRTLVYSGDLGNREKDVLPDPS-L 176 (431)
T ss_dssp HHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSSTTCEEEEEEE-TTEEEEECCCCCCTTSSSSCCCC-B
T ss_pred hhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCcCceEEEEEE-CCEEEEEeCCCCCCCCcccCCcc-c
Confidence 11 3588999999999999999999999999999999996 6679999999998766543 222 2
Q ss_pred CCCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecccccHHHHHHHHHHHcC-----CeEEEccc
Q 012419 250 NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG-----VKIYANAS 324 (464)
Q Consensus 250 ~~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s~Gr~qell~l~~~~~-----~~I~v~~~ 324 (464)
..++|+||+||||+++. ++++.+..+++.+.|+++++++++ |+||+|++||.|+++.+++++. +|||+++.
T Consensus 177 ~~~~D~LI~EsTy~~~~--h~~~~~~~~~l~~~i~~~~~~gg~--vlIp~fa~gR~qell~~l~~~~~~~~~~pi~~~s~ 252 (431)
T 3iek_A 177 PPLADLVLAEGTYGDRP--HRPYRETVREFLEILEKTLSQGGK--VLIPTFAVERAQEILYVLYTHGHRLPRAPIYLDSP 252 (431)
T ss_dssp CCCCSEEEEECTTTTCC--CCCHHHHHHHHHHHHHHHHHTTCE--EEEECCTTTHHHHHHHHHHHHGGGSCCCCEEEECH
T ss_pred cCCccEEEEEcccCCcC--CCChHHHHHHHHHHHHHHHHcCCe--EEEEeccchHHHHHHHHHHHHHHhccCCCEEEeCh
Confidence 47899999999999876 488999999999999999988775 9999999999999999998865 89999985
Q ss_pred HH----HHHHhc---------------CCCccccCc---cc--------cCCCceEEEEeCCCCChhhHHHHHhhhCCCC
Q 012419 325 RR----RVLQSF---------------DWPELSGNL---CT--------QGNDTLLHVLPMSSLKFETLKDYLKPYGNQY 374 (464)
Q Consensus 325 ~~----~i~~~~---------------~~~~~~~~~---~~--------~~~~~~V~v~~~~~l~~g~~~~~l~~~~~~~ 374 (464)
+. ++++.+ ..|+..+.+ .+ +..+|+|++++++||++|+++++++++..++
T Consensus 253 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~p~viia~~gm~~~G~~~~~l~~~~~~~ 332 (431)
T 3iek_A 253 MAGRVLSLYPRLVRYFSEEVQAHFLQGKNPFRPAGLEVVEHTEASKALNRAPGPMVVLAGSGMLAGGRILHHLKHGLSDP 332 (431)
T ss_dssp HHHHHHHHGGGGGGGSCHHHHHHHHTTSCTTCCTTEEECCSHHHHHHHHHSCSSEEEEESCTTSSSSHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCeEEeCCHHHHHHHhcCCCCeEEEecCCCCCCChHHHHHHHhcCCC
Confidence 32 333322 112211211 11 2468999999999999999999999999999
Q ss_pred CCEEEEeeccccccCCccccccccccC--CCC-----CEEEEeE-eccCCCCHHHHHHHHHhcCCCeEEEecccCCHHHH
Q 012419 375 AAVLAFRPTGWTYSETVGNQLDLIRPL--SRG-----NITIYGV-PYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASR 446 (464)
Q Consensus 375 ~~~i~~~~tG~~~~~~~g~~l~~~~~~--~~g-----~~~i~~i-~~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~~~~ 446 (464)
+|.|+| +|||+++|+|++|..-... ..| +++++.+ .||+|||++||++|++.++ +|+ ++|||++++
T Consensus 333 ~n~ii~--~gyq~~gt~g~~l~~~~~~v~~~g~~~~v~a~v~~~~~~saHad~~~l~~~~~~~~--~v~--lvHge~~~~ 406 (431)
T 3iek_A 333 RNALVF--VGYQPQGGLGAEIIARPPAVRILGEEVPLRASVHTLGGFSGHAGQDELLDWLQGEP--RVV--LVHGEEEKL 406 (431)
T ss_dssp TCEEEE--CSCCCTTSHHHHHHTCCSEEEETTEEEECCSEEEECGGGCSSCCHHHHHHHHTTCS--EEE--EESSCHHHH
T ss_pred CCeEEE--ECCCCCCChHHHhhcCCcEEEECCEEEEEEEEEEEECCccccCCHHHHHHHHHhCC--eEE--EECCCHHHH
Confidence 999999 9999999999987632210 122 4467888 5999999999999999875 888 899999999
Q ss_pred HHHHHHHHHH
Q 012419 447 EKMQSFFREW 456 (464)
Q Consensus 447 ~~l~~~l~~~ 456 (464)
+.|++.|++.
T Consensus 407 ~~l~~~l~~~ 416 (431)
T 3iek_A 407 LALGKLLALR 416 (431)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988765
No 3
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=100.00 E-value=5.5e-45 Score=383.28 Aligned_cols=338 Identities=15% Similarity=0.241 Sum_probs=254.5
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc----CCCCcEEeCHHHHHHHHHhhccC
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR----WSHGPIYCSPLTARLVRMCLLVN 186 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~----~~~~~Iy~s~~t~~~l~~~~~~~ 186 (464)
.++..+++|||......+.. .++.+......+||+|||||+|.||+||++.. .++.+||+++.|..++...+...
T Consensus 32 ~~~~~iLID~G~~~~~~~~~-~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~ 110 (459)
T 2i7t_A 32 FKGRKIMLDCGIHPGLEGMD-ALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDY 110 (459)
T ss_dssp ETTEEEEECCCCCTTSCGGG-GSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCcCccccc-ccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHHHHHHHHHHH
Confidence 57889999999853221111 11111112346899999999999999999963 35689999999988765443210
Q ss_pred ---------------------CCceEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCCcccccc
Q 012419 187 ---------------------PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSY 245 (464)
Q Consensus 187 ---------------------~~~~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~~~~~~~ 245 (464)
...+.++++++++.+++++|+++++||++|+++|.++. ++++++||||+....+....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~Gs~~~~i~~-~~~~il~sGD~~~~~~~~~~ 189 (459)
T 2i7t_A 111 VKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEI-AGVKLLYTGDFSRQEDRHLM 189 (459)
T ss_dssp CC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSSTTCEEEEEEE-TTEEEEECCSCCCC-----C
T ss_pred HHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCccCcEEEEEEE-CCcEEEEeCCCCCCCCcccC
Confidence 12578899999999999999999999999999999996 66799999999987765432
Q ss_pred -ccccCCCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecccccHHHHHHHHHHHc--------C
Q 012419 246 -PLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKAL--------G 316 (464)
Q Consensus 246 -~~l~~~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s~Gr~qell~l~~~~--------~ 316 (464)
..+...++|+||+||||+++.+ +++.+..+++.+.+.++++.+++ |+||+|++||.|+++.+++.+ +
T Consensus 190 ~~~~~~~~~D~Li~Esty~~~~~--~~~~~~~~~l~~~i~~~~~~~g~--vlip~fa~gr~qell~~l~~~~~~~~~~~~ 265 (459)
T 2i7t_A 190 AAEIPNIKPDILIIESTYGTHIH--EKREEREARFCNTVHDIVNRGGR--GLIPVFALGRAQELLLILDEYWQNHPELHD 265 (459)
T ss_dssp CCCCCSSCCSEEEEECTTTTCCC--CCHHHHHHHHHHHHHHHHHTTCE--EEEECCSSSSHHHHHHHHHHHHHHCGGGTT
T ss_pred CCCcCCCCCeEEEECCCCCCCCC--CChHHHHHHHHHHHHHHHHCCCE--EEEEecchhHHHHHHHHHHHHHHhcCCCCC
Confidence 1222368999999999998654 88888999999999999988774 999999999999998887653 6
Q ss_pred CeEEEcccHH----HHHHhcC-C-------------CccccCc---cc----cCCCceEEEEeCCCCChhhHHHHHhhhC
Q 012419 317 VKIYANASRR----RVLQSFD-W-------------PELSGNL---CT----QGNDTLLHVLPMSSLKFETLKDYLKPYG 371 (464)
Q Consensus 317 ~~I~v~~~~~----~i~~~~~-~-------------~~~~~~~---~~----~~~~~~V~v~~~~~l~~g~~~~~l~~~~ 371 (464)
+|||+++.+. ++|+.+. + |...+.+ .+ +..+|+|++++++|+++|+++++++++.
T Consensus 266 ~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~viia~~gm~~~g~~~~~l~~~~ 345 (459)
T 2i7t_A 266 IPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWC 345 (459)
T ss_dssp SCEEEC---------------------------------CCSEEECCCTTSSCCCSSEEEEESCTTCSSHHHHHHHHHHT
T ss_pred ccEEEECHHHHHHHHHHHHHHHHHhHHHHHHhcccCCcCCCcceeeCCHHHhcCCCCeEEEEcCcccCCCHHHHHHHHHc
Confidence 8999998642 3444331 0 1101111 11 2357899999999999999999999999
Q ss_pred CCCCCEEEEeeccccccCCcccccccccc---CCCC-----CEEEEeEeccCCCCHHHHHHHHHhcCCCeEEEecccCCH
Q 012419 372 NQYAAVLAFRPTGWTYSETVGNQLDLIRP---LSRG-----NITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNA 443 (464)
Q Consensus 372 ~~~~~~i~~~~tG~~~~~~~g~~l~~~~~---~~~g-----~~~i~~i~~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~ 443 (464)
.+++|.|+| +||++++|.|+++..... ...| +++++.++||+|||++||++||+.++|++|+ ++||++
T Consensus 346 ~~~~~~ii~--~gy~~~gt~g~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~i~~~~p~~v~--~vHGe~ 421 (459)
T 2i7t_A 346 TDKRNGVII--AGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVI--LVHGEQ 421 (459)
T ss_dssp TCTTCEEEE--CSCCCTTSHHHHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHHHHHHCCSEEE--EESSCH
T ss_pred CCCCCeEEE--EecCCCCChHHHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHHHHhcCCCeEE--EeCCCH
Confidence 999999999 999999999987643111 1123 4578888999999999999999999999999 679999
Q ss_pred HHHHHHHHHHHHHHh
Q 012419 444 ASREKMQSFFREWLS 458 (464)
Q Consensus 444 ~~~~~l~~~l~~~l~ 458 (464)
...++|++.|++.+.
T Consensus 422 ~~~~~~~~~l~~~~~ 436 (459)
T 2i7t_A 422 NEMARLKAALIREYE 436 (459)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999998887664
No 4
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=100.00 E-value=2.7e-43 Score=355.50 Aligned_cols=290 Identities=32% Similarity=0.582 Sum_probs=242.2
Q ss_pred CCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccCCCCcEEeCHHHHHHHHHhhccCCCceEEcCCCCEEEE---
Q 012419 125 KIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVI--- 201 (464)
Q Consensus 125 ~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~~~~~~~~v~~~~~~~i--- 201 (464)
.+++.++.+|+|++..+.+|++|||||+|.||+|||+.++ +++||+++.|+.+++..++.....++++++++.+.+
T Consensus 6 ~i~g~~i~vD~f~~~~~~~i~ai~lTH~H~DHiggl~~l~-~~pVy~s~~t~~ll~~~l~~~~~~~~~~~~~~~~~i~~~ 84 (336)
T 3zdk_A 6 LIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTW-ARPLYCSPITAHLLHRHLQVSKQWIQALEVGESHVLPLD 84 (336)
T ss_dssp ECTTSSEEESCCCHHHHCSSCEEECCCCCGGGSTTCSTTC-CSCEEECHHHHHHHHHHHCCCTTTEEECCTTSEEEEESS
T ss_pred EeCCCCEeecCCcccCCCCCCEEEECCChHHHHCchHHHc-CCCEEecHHHHHHHHHhhhhcccceEecCCCCeEEecCc
Confidence 4678889999998765679999999999999999999876 789999999999999887766557889999999876
Q ss_pred ----CCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCCccccccccc-cCCCccEEEEeCCCCCCCCCCCCHHHHH
Q 012419 202 ----DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLL-VNHRVNVLYLDTTYCNPKYKFPSKEDVL 276 (464)
Q Consensus 202 ----~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l-~~~~~DlLi~EsT~~~~~~~~p~~~~~~ 276 (464)
++++|++++++|++|+++|.|+. ++++|+||||++..+.....+.+ ...++|+||+||||+++.+.+|++++..
T Consensus 85 ~~~~g~~~v~~~~~~H~~gs~~~~i~~-~~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~~~~~~~pse~~v~ 163 (336)
T 3zdk_A 85 EIGQETMTVTLLDANHCPGSVMFLFEG-YFGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAA 163 (336)
T ss_dssp SSSSCEEEEEEEECSSSTTCEEEEEEE-TTEEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBCCTTCCCCCHHHHH
T ss_pred ccccCCEEEEEEECCCCcceEEEEEEe-CCceEEEeCCCCCCcccccchhhhccCCccEEEEecCCCCCCCCCCCHHHHH
Confidence 88999999999999999999997 55699999999988776543333 2478999999999999888889999888
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecccccHHHHHHHHHHHcCCeEEEcccHHHHHHhcCCCccccCccccCCCceEEEEeCC
Q 012419 277 NYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVLQSFDWPELSGNLCTQGNDTLLHVLPMS 356 (464)
Q Consensus 277 ~~l~~~i~~~l~~~~~~~vli~~~s~Gr~qell~l~~~~~~~I~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~V~v~~~~ 356 (464)
+.+.+.++++ +..+|+|++|++||+|++++++++++++|++++..+++++.+|++. .+++++..+.++++...
T Consensus 164 ~~l~~~i~~~----~~g~vii~~f~vgR~q~i~~~a~~~grkV~v~gr~~~~~~~lg~~~---~~~~~~~~~~i~~~~~~ 236 (336)
T 3zdk_A 164 HQIVQLIRKH----PQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLAD---VFTVEEKAGRIHAVDHM 236 (336)
T ss_dssp HHHHHHHHTC----TTSEEEEEECSSSCHHHHHHHHHHHTCCEECCHHHHHHHHHTTCCS---CEESCGGGCSEEEEEGG
T ss_pred HHHHHHHHhC----CCCcEEEeecchHHHHHHHHHHHHcCCEEEEEhHHHHHHHhcCCcc---ccCCHhHcCCCCcchhh
Confidence 8887766543 2336999999999999999999999999999999999999999763 46666667788888776
Q ss_pred CCChhhHHHHHhhhCCCCCCEEEEeeccccccCCccccccccccCCCCCEEEEeEeccCCCCHHHHHHHHHhcCCCeEEE
Q 012419 357 SLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLIRPLSRGNITIYGVPYSEHSSFTELREFVQFLRPDKIIP 436 (464)
Q Consensus 357 ~l~~g~~~~~l~~~~~~~~~~i~~~~tG~~~~~~~g~~l~~~~~~~~g~~~i~~i~~S~Had~~eL~~~v~~l~Pk~ViP 436 (464)
.+.. ..+.++. +....|.+.||||..++.. +| ++.+|||+||+++||++|++.++|+.|||
T Consensus 237 ~i~~----~al~r~~-~~~~~i~i~~S~~~ipg~~-----------~~---~~~vh~S~Ha~~~EL~~~~~~~~P~~~iP 297 (336)
T 3zdk_A 237 EICH----SNMLRWN-QTHPTIAILPTSRKIHSSH-----------PD---IHVIPYSDHSSYSELRAFVAALKPCQVVP 297 (336)
T ss_dssp GCSH----HHHHHHH-HHSCEEEEEECSSCCCCSS-----------TT---EEEECCCSSCBHHHHHHHHHHHCCSCEEE
T ss_pred eeHH----HHHHhhh-CcCCeEEEEeccccccCCc-----------cC---ceeeEecCCCCHHHHHHHHHHhCCCEEEE
Confidence 6552 3444554 4456788899998776521 22 46799999999999999999999999999
Q ss_pred eccc-CCHH
Q 012419 437 TVNV-WNAA 444 (464)
Q Consensus 437 ~~~h-g~~~ 444 (464)
+ | ||+.
T Consensus 298 v--h~ge~~ 304 (336)
T 3zdk_A 298 I--VSRRPC 304 (336)
T ss_dssp S--CTTSCC
T ss_pred E--ECCcCc
Confidence 8 7 8874
No 5
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=100.00 E-value=9.1e-43 Score=380.68 Aligned_cols=338 Identities=20% Similarity=0.253 Sum_probs=260.5
Q ss_pred cCCceeEEcCCCCCCCC--CCceEecCCCc--C--CC--CCccEEEeCccchhhhcCcccc---C-CCCcEEeCHHHHHH
Q 012419 111 HLKKIVDRSCPFYKKIP--GTPFTVDAFRY--G--SI--KGCSAYFLTHFHYDHYGGLGKR---W-SHGPIYCSPLTARL 178 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~--~~~~~id~f~~--~--~i--~~id~I~iTH~H~DHiggL~~~---~-~~~~Iy~s~~t~~~ 178 (464)
.++..+++|||...... +. ..++.+.+ . .. .+||+|||||+|.||+||++.+ . ++++||+++.|..+
T Consensus 209 ~~~~~ILID~G~~~~~~~~g~-~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~~~~~~pIy~t~~t~~l 287 (651)
T 3af5_A 209 TDESFVLVDFGVNVAMLNDPY-KAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDL 287 (651)
T ss_dssp ESSCEEEECCCCCGGGTTCHH-HHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHTTCCCSCEEECHHHHHH
T ss_pred ECCcEEEEeCCCChhccccch-hhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhcCCCCceEEEcHHHHHH
Confidence 57889999999864211 11 12222221 1 23 6799999999999999999963 3 47899999999887
Q ss_pred HHHhhcc----------C-C----------CceEEcCCCCEEEE-CCEEEEEEEcCCCCCceEEEEEeeCCc--EEEEEC
Q 012419 179 VRMCLLV----------N-P----------SYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQ--CYLHTG 234 (464)
Q Consensus 179 l~~~~~~----------~-~----------~~~~~v~~~~~~~i-~~~~v~~~~agH~~gs~~~~i~~~~g~--~ilytG 234 (464)
+...+.. . . ..++++++++.+.+ ++++|+++++||++|+++|.++. ++. +++|||
T Consensus 288 l~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~~-~~~~~~ilftG 366 (651)
T 3af5_A 288 MVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHI-GNGLHNIAITG 366 (651)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEEEE-TTTTTCEEECC
T ss_pred HHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCcCcEEEEEEE-CCCceEEEEeC
Confidence 7644320 0 0 14688999999999 99999999999999999999997 445 899999
Q ss_pred CCCCCcccccccc-ccCCCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecccccHHHHHHHHHH
Q 012419 235 DFRASRLMQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISK 313 (464)
Q Consensus 235 D~~~~~~~~~~~~-l~~~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s~Gr~qell~l~~ 313 (464)
|++...+...... +...++|+||+||||+++...|+++.+..+.+.+.|.+++++++ .|+||+|++||.|+++.+++
T Consensus 367 D~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~~g--~vlIp~favgR~qell~~l~ 444 (651)
T 3af5_A 367 DFKFIPTRLLEPANAKFPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGG--KVLIPAMAVGRAQEVMMVLE 444 (651)
T ss_dssp SCCCSCCSSCCCCCCBCSSCSEEEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHTTC--EEEEECCTTTHHHHHHHHHH
T ss_pred CCCCCcccccccccccCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--EEEEeccCccHHHHHHHHHH
Confidence 9998776443221 22468999999999999876689999999999999999988766 59999999999999999998
Q ss_pred HcC------CeEEEcccHHHH---HHhc-C---------------CCcccc---Cccc--------cCCCceEEEEeCCC
Q 012419 314 ALG------VKIYANASRRRV---LQSF-D---------------WPELSG---NLCT--------QGNDTLLHVLPMSS 357 (464)
Q Consensus 314 ~~~------~~I~v~~~~~~i---~~~~-~---------------~~~~~~---~~~~--------~~~~~~V~v~~~~~ 357 (464)
+++ +|||++++.++. +..+ + .|+... .+.+ ...+++|++++++|
T Consensus 445 ~~~~~~~l~~~I~~dg~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~v~~~~~~~~~~~~~~~~vIia~~gm 524 (651)
T 3af5_A 445 EYARIGGIEVPIYLDGMIWEATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRERQDIIDSNEPAIIIASSGM 524 (651)
T ss_dssp HHHTTTCCCSCEEEESSHHHHHHHHHTCGGGSCHHHHHHTTTSSCCSTTCTTEEECCSHHHHHHHHHSCSCEEEEESCTT
T ss_pred HhhhhcCCCCcEEEechHHHHHHHHHHhHHhcCHHHHHHHHhccCCCccCCceEEcCCHHHHHHHhcCCCCEEEEECCCC
Confidence 765 499999976543 3321 1 111000 1110 12678999999999
Q ss_pred CChhhHHHHHhhhCCCCCCEEEEeeccccccCCcccccccc----ccC-CCC-------CEEEEeEe-ccCCCCHHHHHH
Q 012419 358 LKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI----RPL-SRG-------NITIYGVP-YSEHSSFTELRE 424 (464)
Q Consensus 358 l~~g~~~~~l~~~~~~~~~~i~~~~tG~~~~~~~g~~l~~~----~~~-~~g-------~~~i~~i~-~S~Had~~eL~~ 424 (464)
+++|++++++++++.+++|.|+| |||+.+++.|+++... +.. ..| +++++.++ ||+|||++||++
T Consensus 525 ~~gg~~~~~l~~~~~~~~~~vi~--sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~ 602 (651)
T 3af5_A 525 LVGGPSVEYFKQLAPDPKNSIIF--VSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMN 602 (651)
T ss_dssp SSSSHHHHHHHHHTTCTTCEEEE--CSCCCTTCHHHHHHHTCSEEEEECGGGCEEEEECCSEEEECGGGCSSCCHHHHHH
T ss_pred CCCCHHHHHHHHHhCCCCCEEEE--eCCCCCCcHHHHHHhccceeeehhcCCCceEEEeEEEEEEcCcccCcCCHHHHHH
Confidence 99999999999999999999999 9999999988775321 100 012 23467788 999999999999
Q ss_pred HHHhcC--CCeEEEecccCCHHHHHHHHHHHHHH
Q 012419 425 FVQFLR--PDKIIPTVNVWNAASREKMQSFFREW 456 (464)
Q Consensus 425 ~v~~l~--Pk~ViP~~~hg~~~~~~~l~~~l~~~ 456 (464)
|++.++ |++||| +|||++.+..|++++++.
T Consensus 603 ~i~~~~~~P~~vi~--vHGe~~~~~~la~~~~~~ 634 (651)
T 3af5_A 603 YVAKVRPRPERIIT--VHGEPQKCLDLATSIHRK 634 (651)
T ss_dssp HHHHCBSCCSEEEE--ESSCHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCEEEE--EcCCHHHHHHHHHHHHHh
Confidence 999999 999995 599999988888887654
No 6
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=100.00 E-value=5e-42 Score=374.01 Aligned_cols=337 Identities=20% Similarity=0.298 Sum_probs=252.8
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCc--C-CCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHHHHHHhhc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRY--G-SIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLL 184 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~--~-~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~ 184 (464)
.++..+++|||..... + ...++.+.. . ...+||+|||||+|.||+||++.+ .++++||+++.|..++...+.
T Consensus 204 ~~~~~ILID~G~~~~~-~-~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~~~~~~Iy~t~~t~~ll~~~l~ 281 (640)
T 2xr1_A 204 TPESRILIDCGVNVGS-D-ENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCTPPTRDLMVLLQL 281 (640)
T ss_dssp CSSCEEEECCCCBCSS-C-SSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCccc-c-ccccccccccccCCcccCcEEEECCCChhhhccHHHHHhcCCCCeEEECHHHHHHHHHHHH
Confidence 5778999999986422 1 112233221 1 347899999999999999999963 567899999999887654332
Q ss_pred c----------C-C----------CceEEcCCCCEEEE-CCEEEEEEEcCCCCCceEEEEEeeCCc--EEEEECCCCCCc
Q 012419 185 V----------N-P----------SYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQ--CYLHTGDFRASR 240 (464)
Q Consensus 185 ~----------~-~----------~~~~~v~~~~~~~i-~~~~v~~~~agH~~gs~~~~i~~~~g~--~ilytGD~~~~~ 240 (464)
. . . ..+..+.+++.+.+ ++++|+++++||++|+++|.++.+ +. +++||||++...
T Consensus 282 d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~~~~i~~~-~~~~~ilftGD~~~~~ 360 (640)
T 2xr1_A 282 DYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIG-DGLHNVVFTGDYKYEK 360 (640)
T ss_dssp HHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEEEET-TTTEEEEECCSCCSSC
T ss_pred HHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcEEEEEEEC-CceEEEEEECCCCCCC
Confidence 0 0 0 14778999999999 999999999999999999999974 45 899999998876
Q ss_pred ccccccc-ccCCCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecccccHHHHHHHHHHHcC---
Q 012419 241 LMQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG--- 316 (464)
Q Consensus 241 ~~~~~~~-l~~~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s~Gr~qell~l~~~~~--- 316 (464)
.....+. ....++|+||+||||+++.+.|+++.+..+++.+.++++++.+++ |+||+|++||.|+++.++++++
T Consensus 361 ~~ll~~~~~~~~~~DvLi~EsT~g~~~~~h~s~~~~~~~l~~~i~~~~~~~g~--vlIp~favGR~qell~~l~~~~~~~ 438 (640)
T 2xr1_A 361 TRLFDPAVNKFPRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIERGGI--AVIPAFAVGRSQEVMIVLEESIRKG 438 (640)
T ss_dssp CSSCCCCCCBCSCCSEEEEECTTCSTTCCCCCHHHHHHHHHHHC--------C--EEEECCTTTHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCCCCcEEEECCCCCCCccCCCCHHHHHHHHHHHHHHHHhcCCe--EEEEecccchHHHHHHHHHHHHHhC
Confidence 5433221 224689999999999987756799999999999999988877765 9999999999999999887764
Q ss_pred ----CeEEEcccHHH---HHHhc-CC---------------Ccccc---Ccc-----cc--C-CCceEEEEeCCCCChhh
Q 012419 317 ----VKIYANASRRR---VLQSF-DW---------------PELSG---NLC-----TQ--G-NDTLLHVLPMSSLKFET 362 (464)
Q Consensus 317 ----~~I~v~~~~~~---i~~~~-~~---------------~~~~~---~~~-----~~--~-~~~~V~v~~~~~l~~g~ 362 (464)
+|||++++.++ +++.+ ++ ++... .+. .. . .+++|++++++|+++|+
T Consensus 439 ~~~~~~V~~dg~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~vIiat~gm~~gg~ 518 (640)
T 2xr1_A 439 LIPEVPVYLDGMIWEATAIHATHPEYLNNDLRKLIFQKGQNPFLSECFKPVDSHEARQKIIQNPQPCVILATSGMMNGGP 518 (640)
T ss_dssp SSCCCCEEEESSHHHHHHHHHHCGGGSCHHHHHHC------CTTCTTEEEEC-CHHHHHC----CCCEEEESCTTSSSSH
T ss_pred CCCCCcEEEEhHHHHHHHHHHHhHhhhcHHHHHHHHhcccCcccCCceEEeCCHHHHHHHhcCCCCeEEEeCCCccCCCh
Confidence 69999997654 33322 11 11001 111 01 2 57899999999999999
Q ss_pred HHHHHhhhCCCCCCEEEEeeccccccCCcccccccc----ccC-CCC-------CEEEEeEe-ccCCCCHHHHHHHHHhc
Q 012419 363 LKDYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI----RPL-SRG-------NITIYGVP-YSEHSSFTELREFVQFL 429 (464)
Q Consensus 363 ~~~~l~~~~~~~~~~i~~~~tG~~~~~~~g~~l~~~----~~~-~~g-------~~~i~~i~-~S~Had~~eL~~~v~~l 429 (464)
+++++++++.+++|.|+| |||+.+++.|+++... +.. ..| +++++.++ ||+|||++||++|++.+
T Consensus 519 ~~~~l~~~~~~~~~~vi~--sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~ 596 (640)
T 2xr1_A 519 VMEYFKAFAEDPRNTLVF--VGYQADGTIGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQVVDGFSGHSDRRQLMEYVKRM 596 (640)
T ss_dssp HHHHHHHHSSCTTCEEEE--CSCCCTTCHHHHHHTTCCC-----------CCCCCSEEEECCCCSCSCCHHHHHHHHHTC
T ss_pred HHHHHHHhhCCCCCEEEE--ecCCCCCCHHHHHhhccceeeeeccCCCceEEeeeEEEEEEccccccCCHHHHHHHHHHh
Confidence 999999999999999999 9999999988875321 110 012 33577898 99999999999999999
Q ss_pred C--CCeEEEecccCCHHHHHHHHHHHHHH
Q 012419 430 R--PDKIIPTVNVWNAASREKMQSFFREW 456 (464)
Q Consensus 430 ~--Pk~ViP~~~hg~~~~~~~l~~~l~~~ 456 (464)
+ |++|+ ++|||++.+..|++++++.
T Consensus 597 ~~~P~~vi--~vHGe~~~~~~~a~~~~~~ 623 (640)
T 2xr1_A 597 QPRPERVF--TEHGDEKACVDLASSVYKK 623 (640)
T ss_dssp BSCCSEEE--EESSCHHHHHHHHHHHHHH
T ss_pred ccCCCEEE--EECCCHHHHHHHHHHHHHH
Confidence 9 99999 5599999999888888654
No 7
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=3.1e-42 Score=375.71 Aligned_cols=339 Identities=19% Similarity=0.247 Sum_probs=259.3
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCc--CCCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHHHHHHhhcc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRY--GSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLV 185 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~--~~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~ 185 (464)
.++..+++|||...........++.+.. ....+||+|||||+|.||+||++.+ .++++||+++.|..++...+..
T Consensus 200 ~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~~~~~~Iy~t~~t~~l~~~~l~d 279 (636)
T 2ycb_A 200 TPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCTAPTRDLMTLLQLD 279 (636)
T ss_dssp CSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHTTCCSCEEECHHHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhcCCCCeEEEcchHHHHHHHHHHH
Confidence 5778999999986422100011222211 2347899999999999999999963 5678999999999876543320
Q ss_pred ----------C-C----------CceEEcCCCCEEEE-CCEEEEEEEcCCCCCceEEEEEeeCCc--EEEEECCCCCCcc
Q 012419 186 ----------N-P----------SYIHPLELNTEHVI-DGVKVTLLEANHCPGAALIHFRLQDGQ--CYLHTGDFRASRL 241 (464)
Q Consensus 186 ----------~-~----------~~~~~v~~~~~~~i-~~~~v~~~~agH~~gs~~~~i~~~~g~--~ilytGD~~~~~~ 241 (464)
. . ..+.++.+++++.+ ++++|+++++||++|+++|.++.+ +. +++||||++....
T Consensus 280 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~~~-~~~~~ilftGD~~~~~~ 358 (636)
T 2ycb_A 280 HIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMAHLHIG-DGQHNMVYTGDFKYEQS 358 (636)
T ss_dssp HHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCEEEEEEET-TTTTCEEECCSCCSSCC
T ss_pred HHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcEEEEEEEC-CCeEEEEEECCCCCCcc
Confidence 0 0 14688999999999 999999999999999999999974 45 7999999998776
Q ss_pred cccccc-ccCCCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecccccHHHHHHHHHHHcC----
Q 012419 242 MQSYPL-LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALG---- 316 (464)
Q Consensus 242 ~~~~~~-l~~~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s~Gr~qell~l~~~~~---- 316 (464)
...... ....++|+||+||||+++...++++.+..+++.+.++++++.+++ ++||+|++||.|+++.+++.++
T Consensus 359 ~ll~~~~~~~~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~--vlIp~fa~GR~qell~~l~~~~~~~~ 436 (636)
T 2ycb_A 359 RLLEAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGK--ILIPVFAVGRAQELMIVLEEYIRTGI 436 (636)
T ss_dssp SSSCCCCCCCSCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCC--EEEECCTTTHHHHHHHHHHHHHHTTS
T ss_pred cccCCcccCCCCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCE--EEEEECCCcHHHHHHHHHHHHHHhCC
Confidence 433221 224689999999999987655799999999999999999888776 9999999999999998887653
Q ss_pred ---CeEEEcccHHH---HHHhc-CC---------------CccccC---ccc-------cCCCceEEEEeCCCCChhhHH
Q 012419 317 ---VKIYANASRRR---VLQSF-DW---------------PELSGN---LCT-------QGNDTLLHVLPMSSLKFETLK 364 (464)
Q Consensus 317 ---~~I~v~~~~~~---i~~~~-~~---------------~~~~~~---~~~-------~~~~~~V~v~~~~~l~~g~~~ 364 (464)
+|||++++.++ ++..+ ++ |+.... +.+ ...+++|++++++|+++|+++
T Consensus 437 ~~~~~V~~dg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~~~vIiat~gm~~gg~~~ 516 (636)
T 2ycb_A 437 IDEVPVYIDGMIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERREIVEGEPSIILSTSGMLTGGNSL 516 (636)
T ss_dssp SCCCCEEEEHHHHHHHHHHHHSGGGSCHHHHHHHHTTCCCGGGCTTEEEECCHHHHHHHHHSSSCEEEESCSSSSSHHHH
T ss_pred CCCCeEEEehHHHHHHHHHHHhHHhhCHHHHHHHHhccCCcccCCceEEeCCHHHHHHhccCCCEEEEecCCccCCChHH
Confidence 69999997544 33221 11 110011 110 015789999999999999999
Q ss_pred HHHhhhCCCCCCEEEEeeccccccCCcccccccc----ccC-CCC-------CEEEEeEe-ccCCCCHHHHHHHHHhcC-
Q 012419 365 DYLKPYGNQYAAVLAFRPTGWTYSETVGNQLDLI----RPL-SRG-------NITIYGVP-YSEHSSFTELREFVQFLR- 430 (464)
Q Consensus 365 ~~l~~~~~~~~~~i~~~~tG~~~~~~~g~~l~~~----~~~-~~g-------~~~i~~i~-~S~Had~~eL~~~v~~l~- 430 (464)
+++++++.+++|.|+| +||+.+++.|+++... +.. ..| +++++.++ ||+|||++||++|++.++
T Consensus 517 ~~l~~~~~~~~~~vi~--sg~~~~Gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~~~SgHad~~eL~~~i~~~~~ 594 (636)
T 2ycb_A 517 EYFKWLCEDPDNSLVF--VGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKTIEGFSGHSDRRQLMEYVKRISP 594 (636)
T ss_dssp HHHHHHTTCTTSEEEE--CSCCCSSSHHHHHHTTCCEEEEECSSSCEEEEECCSEEEECCSCCSSCCHHHHHHHHHSCSS
T ss_pred HHHHHHhCCCCCEEEE--ecCCCCCCHHHHhhcCCceeeeeccCCceeEEEeEEEEEEECCcceeCCHHHHHHHHHHhcc
Confidence 9999999999999999 9999999988775321 100 112 23567788 999999999999999999
Q ss_pred -CCeEEEecccCCHHHHHHHHHHHHHH
Q 012419 431 -PDKIIPTVNVWNAASREKMQSFFREW 456 (464)
Q Consensus 431 -Pk~ViP~~~hg~~~~~~~l~~~l~~~ 456 (464)
|++||| +||+++.+..|++++++.
T Consensus 595 ~Pk~vi~--vHGe~~~~~~~a~~~~~~ 619 (636)
T 2ycb_A 595 KPEKILL--CHGDNYKTLDLASSIYRT 619 (636)
T ss_dssp CCSEEEE--ESSCHHHHHHHHHHHHHH
T ss_pred CCCEEEE--ECCCHHHHHHHHHHHHHH
Confidence 999995 599999988888887654
No 8
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=100.00 E-value=2.2e-38 Score=339.75 Aligned_cols=328 Identities=15% Similarity=0.164 Sum_probs=238.4
Q ss_pred cCCceeEEcCCCCC---CCCCCceEecCCCc--CCCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHhh
Q 012419 111 HLKKIVDRSCPFYK---KIPGTPFTVDAFRY--GSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCL 183 (464)
Q Consensus 111 ~~~~~~lidcG~~~---~~~~~~~~id~f~~--~~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~ 183 (464)
.++..+++|||... ...+.+..++.+.+ ....+||+|||||+|.||+||++.+. .+++||+++.|..++...+
T Consensus 29 ~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~~~~pIy~t~~t~~ll~~~l 108 (555)
T 3zq4_A 29 FQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKL 108 (555)
T ss_dssp ETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTTCCCCEEECHHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHhcCceEEECHHHHHHHHHHH
Confidence 57889999999842 23444445554432 23478999999999999999999643 4789999999998887654
Q ss_pred cc----CCCceEEcCCCCEEEECCEEEEEEEcCC-CCCceEEEEEeeCCcEEEEECCCCCCcccccc----ccc---cCC
Q 012419 184 LV----NPSYIHPLELNTEHVIDGVKVTLLEANH-CPGAALIHFRLQDGQCYLHTGDFRASRLMQSY----PLL---VNH 251 (464)
Q Consensus 184 ~~----~~~~~~~v~~~~~~~i~~~~v~~~~agH-~~gs~~~~i~~~~g~~ilytGD~~~~~~~~~~----~~l---~~~ 251 (464)
.. ....++.+.+++++.+++++|++++++| ++|+++|.++.+ +.+++||||+.+....... ..+ ...
T Consensus 109 ~~~~~~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pgs~~~~i~~~-~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~ 187 (555)
T 3zq4_A 109 EEHGLLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTP-PGNIVHTGDFKFDFTPVGEPANLTKMAEIGKE 187 (555)
T ss_dssp HHHSTTTTCCEEECCTTCCEEETTEEEEEEEEBCSSSSEEEEEEEET-TEEEEECCSCBCCSSCSSSCCCHHHHHHHHHT
T ss_pred HHcCccCCCceEEeCCCCEEEECCEEEEEEeCCCCCcCcEEEEEEEC-CcEEEEeCCCCCCCCcCcCccCHHHHHHhccc
Confidence 31 2346889999999999999999999988 999999999985 4599999999987653311 011 125
Q ss_pred CccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-CCCeEEEEeccc--ccHHHHHHHHHHHcCCeEEEcccHH--
Q 012419 252 RVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKK-QPKTLVVVGAYS--IGKESVFLAISKALGVKIYANASRR-- 326 (464)
Q Consensus 252 ~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~-~~~~~vli~~~s--~Gr~qell~l~~~~~~~I~v~~~~~-- 326 (464)
++|+||+||||+++....++..+ +.+.+.+++++ ++ +|+||+|+ +||.|+++.+++++++||++++..+
T Consensus 188 ~~d~Li~esT~~~~~~~~~se~~----v~~~i~~~~~~~~g--rvii~~fasnv~R~q~il~~a~~~gr~v~v~grs~~~ 261 (555)
T 3zq4_A 188 GVLCLLSDSTNSENPEFTMSERR----VGESIHDIFRKVDG--RIIFATFASNIHRLQQVIEAAVQNGRKVAVFGRSMES 261 (555)
T ss_dssp CEEEEEEECTTTTCCSCCCCHHH----HHHHHHHHHHHCCS--CEEEECCTTCHHHHHHHHHHHHTTTCEEEEESHHHHH
T ss_pred CCcEEEecCcccCCCCCCCCHHH----HHHHHHHHHHhCCC--EEEEEEChhHHHHHHHHHHHHHHHCCEEEEeCHHHHH
Confidence 79999999999987655555544 44444555554 44 48999999 9999999999999999999999643
Q ss_pred --HHHHhcCCCcccc--C-----ccccCCCceEEEEeCCCCChhhHHHHHhhhCCCCC--------CEEEEeeccccccC
Q 012419 327 --RVLQSFDWPELSG--N-----LCTQGNDTLLHVLPMSSLKFETLKDYLKPYGNQYA--------AVLAFRPTGWTYSE 389 (464)
Q Consensus 327 --~i~~~~~~~~~~~--~-----~~~~~~~~~V~v~~~~~l~~g~~~~~l~~~~~~~~--------~~i~~~~tG~~~~~ 389 (464)
++++.+|+-.+.+ . +...+.++.|+++++++ |...+++.+++.++. +.|+| +||+.++
T Consensus 262 ~~~~~~~~g~l~~p~~~~v~~~~~~~~~~~~~vii~tgsq---Ge~~~~L~r~a~~~~~~~~~~~~d~vi~--s~~~ipG 336 (555)
T 3zq4_A 262 AIEIGQTLGYINCPKNTFIEHNEINRMPANKVTILCTGSQ---GEPMAALSRIANGTHRQISINPGDTVVF--SSSPIPG 336 (555)
T ss_dssp HHHHHHGGGSCCCCGGGEECGGGTTTSCGGGEEEEECCTT---CCTTSHHHHHHSSCCSSCCCCTTCEEEE--CSCCCTT
T ss_pred HHHHHHHcCCccCCcccEeCHHHHhhCCCCCEEEEeCCCC---chHHHHHHHHhcCCCCccccCCCCEEEE--ECCCCCC
Confidence 4556665422111 1 12224456677777763 334567777766544 49999 9999988
Q ss_pred CccccccccccCCCCCEEEE-----eEeccCCCCHHHHHHHHHhcCCCeEEEecccCCHHHHHHHHHH
Q 012419 390 TVGNQLDLIRPLSRGNITIY-----GVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSF 452 (464)
Q Consensus 390 ~~g~~l~~~~~~~~g~~~i~-----~i~~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~~~~~~l~~~ 452 (464)
+.+.....++...+-++++. .+++|+||+++||+.|++.++|+++||+ |||++....+++.
T Consensus 337 ne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipv--HGe~~~~~~~~~~ 402 (555)
T 3zq4_A 337 NTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPI--HGEYRMQKMHVKL 402 (555)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHHHSCEEEEEEE--SBCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHHHhCCCEEEEc--CCCHHHHHHHHHH
Confidence 76431111111111123432 4899999999999999999999999977 9999988877773
No 9
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=100.00 E-value=2.2e-36 Score=325.16 Aligned_cols=331 Identities=18% Similarity=0.191 Sum_probs=230.9
Q ss_pred cCCceeEEcCCCCC---CCCCCceEecCCCc--CCCCCccEEEeCccchhhhcCccccC--C-----CCcEEeCHHHHHH
Q 012419 111 HLKKIVDRSCPFYK---KIPGTPFTVDAFRY--GSIKGCSAYFLTHFHYDHYGGLGKRW--S-----HGPIYCSPLTARL 178 (464)
Q Consensus 111 ~~~~~~lidcG~~~---~~~~~~~~id~f~~--~~i~~id~I~iTH~H~DHiggL~~~~--~-----~~~Iy~s~~t~~~ 178 (464)
.++..+++|||... ..++.+..++.+.+ ....+||+|||||+|.||+||++.+. . +++||+++.|.++
T Consensus 37 ~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~~~~~~~pIy~~~~t~~~ 116 (562)
T 3bk2_A 37 FRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYGARLTLGL 116 (562)
T ss_dssp ETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCCSEEEEEHHHHHH
T ss_pred ECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhhccccCCceEEeCHHHHHH
Confidence 57789999999742 23344444444432 23478999999999999999999632 1 7899999999988
Q ss_pred HHHhhc---cC--CCceEEcCCCCEEEECC-EEEEEEEcCC-CCCceEEEEEeeCCcEEEEECCCCCCcccccc-----c
Q 012419 179 VRMCLL---VN--PSYIHPLELNTEHVIDG-VKVTLLEANH-CPGAALIHFRLQDGQCYLHTGDFRASRLMQSY-----P 246 (464)
Q Consensus 179 l~~~~~---~~--~~~~~~v~~~~~~~i~~-~~v~~~~agH-~~gs~~~~i~~~~g~~ilytGD~~~~~~~~~~-----~ 246 (464)
++..+. .. ...++++++++.+.+++ ++|++++++| ++|+++|.|+.+ +.+++||||+......... .
T Consensus 117 l~~~l~~~~~~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~i~~~-~~~il~tGD~~~~~~~~~g~~~d~~ 195 (562)
T 3bk2_A 117 LRGKLEEFGLRPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTP-IGTIVHTGDFKLDPTPIDGKVSHLA 195 (562)
T ss_dssp HHHHHHHTTCCSTTSEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEET-TEEEEECCSCCCCSSCTTSCCCCCH
T ss_pred HHHHHHHcCCCcCCceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEEEEEC-CeEEEEcCCCCCCCCCCCCCcccHH
Confidence 776543 11 34678899999999998 9999999999 899999999974 4589999999876543210 0
Q ss_pred ccc---CCCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEeccc--ccHHHHHHHHHHHcCCeEEE
Q 012419 247 LLV---NHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYS--IGKESVFLAISKALGVKIYA 321 (464)
Q Consensus 247 ~l~---~~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s--~Gr~qell~l~~~~~~~I~v 321 (464)
.+. ..++|+||+||||+......++.....+.+.+.+++ .++ +|++++|+ ++|.|+++.++++.++||++
T Consensus 196 ~l~~~~~~~~d~Li~EsT~~~~~g~~~~e~~v~~~l~~~~~~---~~g--rvii~~fas~~~r~q~il~~a~~~~r~V~v 270 (562)
T 3bk2_A 196 KVAQAGAEGVLLLIADATNAERPGYTPSEMEIAKELDRVIGR---APG--RVFVTTFASHIHRIQSVIWAAEKYGRKVAM 270 (562)
T ss_dssp HHHHHHHHCCSEEEEECTTTTCCSCCCCHHHHHHHHHHHHHH---CSS--CEEEECCTTCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhccCCCEEEecccCCCCCCCCChHHHHHHHHHHHHHh---CCC--EEEEEEccccchHHHHHHHHHHHhCCEEEE
Confidence 010 147999999999997554445544444444443332 233 48899999 99999999999999999999
Q ss_pred cccH----HHHHHhcCCCcccc------CccccCCCceEEEEeCCCCChhhHHHHHhhhC--------CCCCCEEEEeec
Q 012419 322 NASR----RRVLQSFDWPELSG------NLCTQGNDTLLHVLPMSSLKFETLKDYLKPYG--------NQYAAVLAFRPT 383 (464)
Q Consensus 322 ~~~~----~~i~~~~~~~~~~~------~~~~~~~~~~V~v~~~~~l~~g~~~~~l~~~~--------~~~~~~i~~~~t 383 (464)
.+.. .++++.+++-.... .+...+.++.|+++++++ +++.. .+.+++ .++++.|+| +
T Consensus 271 ~g~s~~~~~~~~~~~g~l~~~~~~i~~~~~~~~~~~~~vi~~tg~~--ge~~~-~l~ria~~~h~~~~~~~~~~vi~--s 345 (562)
T 3bk2_A 271 EGRSMLKFSRIALELGYLKVKDRLYTLEEVKDLPDHQVLILATGSQ--GQPMS-VLHRLAFEGHAKMAIKPGDTVIL--S 345 (562)
T ss_dssp ECHHHHHHHHHHHHTTSCCCSSCCBCTGGGTTSCGGGEEEEECCTT--SCSHH-HHHHHHTTCCSSCCCCTTCEEEE--C
T ss_pred EChHHHHHHHHHHhcCcccCCCCccCHHHHhcCCCCCEEEEEcCCC--chhHH-HHHhhhhcccccccCCCCCEEEE--E
Confidence 6643 24555555422111 111223445677777654 44332 344443 378899999 9
Q ss_pred cccccCCccccccccccCCCCCEEE-----EeEeccCCCCHHHHHHHHHhcCCCeEEEecccCCHHHHHHHHHHHH
Q 012419 384 GWTYSETVGNQLDLIRPLSRGNITI-----YGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSFFR 454 (464)
Q Consensus 384 G~~~~~~~g~~l~~~~~~~~g~~~i-----~~i~~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~~~~~~l~~~l~ 454 (464)
||+++++.++....++...+-++++ ..+++|+|||++||++|++.++|++|||+ |||++....+++.++
T Consensus 346 ~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipv--HGe~~~~~~~~~~~~ 419 (562)
T 3bk2_A 346 SSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPW--HGEVRHQMNFKWLAE 419 (562)
T ss_dssp SCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEE--SBCHHHHHHHHHHHH
T ss_pred CCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEE--cCCHHHHHHHHHHHH
Confidence 9999988653211111111112333 24689999999999999999999999966 999998877776544
No 10
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=100.00 E-value=2.2e-31 Score=277.05 Aligned_cols=280 Identities=14% Similarity=0.119 Sum_probs=188.5
Q ss_pred CCCCccEEEeCccchhhhcCccccCCCCcEEeCHHHHHHHHHhhcc-------------CCCceEEcCCCCEEEECCEEE
Q 012419 140 SIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV-------------NPSYIHPLELNTEHVIDGVKV 206 (464)
Q Consensus 140 ~i~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~-------------~~~~~~~v~~~~~~~i~~~~v 206 (464)
...+|++|||||+|.||++|++.+..+++||+++.|..++...... ....++.+++++.+.+++++|
T Consensus 81 ~~~~i~~v~lTH~H~DHiggl~~l~~~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v 160 (429)
T 2az4_A 81 KDYQHTAVFLSHAHLDHSRMINYLDPAVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISV 160 (429)
T ss_dssp CCCSEEEEECSCSCHHHHTTGGGBCTTSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEE
T ss_pred ccccCCEEEECCchHHHhCcHhHhcCCCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEECCEEE
Confidence 3478999999999999999999877788999999999888754321 123578899999999999999
Q ss_pred EEEEcCC-CCCceEEEEEeeCCcEEEEECCCCCCcccc-----ccccccCCCccEEEEeCCCCCCC--------CCCCCH
Q 012419 207 TLLEANH-CPGAALIHFRLQDGQCYLHTGDFRASRLMQ-----SYPLLVNHRVNVLYLDTTYCNPK--------YKFPSK 272 (464)
Q Consensus 207 ~~~~agH-~~gs~~~~i~~~~g~~ilytGD~~~~~~~~-----~~~~l~~~~~DlLi~EsT~~~~~--------~~~p~~ 272 (464)
++++++| ++|+++|.++. .+.+++||||+....... .... ..++|+||+||||+... ..+++.
T Consensus 161 ~~~~~~H~~~gs~~~~i~~-~~~~i~~tGD~~~~~~~~~~~~~~~~~--~~~~d~Li~Est~~~~~~~~~~~~~~~~~s~ 237 (429)
T 2az4_A 161 EIVPVDHDAYGASALLIRT-PDHFITYTGDLRLHGHNREETLAFCEK--AKHTELLMMEGVSISFPEREPDPAQIAVVSE 237 (429)
T ss_dssp EEEECCCSSTTCEEEEEEE-TTEEEEECCSCCSSSTTHHHHHHHHHH--HTTCSEEEEECCGGGSCCCCCCTTBCCCCSH
T ss_pred EEEECCCCChhhEEEEEEe-CCcEEEECCCcccCCCchHHHHHHHHh--ccCCCEEEECCCCcCcccccccccCCCCCCH
Confidence 9999999 89999999997 456899999998754321 1111 24899999999998721 114444
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEecccccHHHHHHHHHHHcCCeEEEcccHHHHH-HhcC----C---Ccc-----c-
Q 012419 273 EDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKESVFLAISKALGVKIYANASRRRVL-QSFD----W---PEL-----S- 338 (464)
Q Consensus 273 ~~~~~~l~~~i~~~l~~~~~~~vli~~~s~Gr~qell~l~~~~~~~I~v~~~~~~i~-~~~~----~---~~~-----~- 338 (464)
++..+. +.++++++++ ++++++++.+....+.++++..++||++++..+..+ +.+. + +.. .
T Consensus 238 ~~~~~~----i~~~~~~~~~-rlil~h~~~~~~~r~~~~a~~~gr~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (429)
T 2az4_A 238 EDLVQH----LVRLELENPN-RQITFNGYPANVERFAKIIEKSPRTVVLEANMAALLLEVFGIEVRYYYAESGKIPELNP 312 (429)
T ss_dssp HHHHHH----HHHHHHTCSS-SCEEEEECTTCHHHHHHHHHHCSSEEEEEHHHHHHHHHHHCCCCEEECSSSSCCTTSCG
T ss_pred HHHHHH----HHHHHHhCCC-cEEEEEeccchHHHHHHHHHHhCCEEEEEChhHHHHHhhccccCeeEecccccccccCc
Confidence 444444 4444444433 356666553333334444889999999999876332 2211 1 100 0
Q ss_pred c-Cccc----cCCCceEEEEeCCCCChhhHHHHHhhhCCCCCCEEEEeeccccccCCcc---ccccccccCCCCCEEEEe
Q 012419 339 G-NLCT----QGNDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTYSETVG---NQLDLIRPLSRGNITIYG 410 (464)
Q Consensus 339 ~-~~~~----~~~~~~V~v~~~~~l~~g~~~~~l~~~~~~~~~~i~~~~tG~~~~~~~g---~~l~~~~~~~~g~~~i~~ 410 (464)
. .++. ...... +++. .++. .++. +++.++| ++|...++.. .++. +...+.+++++.
T Consensus 313 ~~~~~~~~~~~~~~~~-ii~~-----~~~~----~~l~--~~~~vi~--s~~~~~g~~~~~~~~~~--~~~~~~~~~v~~ 376 (429)
T 2az4_A 313 ALEIPYDTLLKDKTDY-LWQV-----VNQF----DNLQ--EGSLYIH--SDAQPLGDFDPQYRVFL--DLLAKKDITFVR 376 (429)
T ss_dssp GGBCCHHHHHHCSSSE-EEEC-----CSCG----GGSC--TTCEEEE--ESCSSCSTTSHHHHHHH--HHHHHTTCEEEE
T ss_pred cceecHHHHhhCCCcE-EEEe-----cCcH----HhhC--CCCEEEE--eCCCCCcccchHHHHHH--HHHHhCCCEEEE
Confidence 0 1111 112333 4442 2221 1342 3578888 8887766541 1111 111122457778
Q ss_pred EeccCCCCHHHHHHHHHhcCCCeEEEecccCCHHH
Q 012419 411 VPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAAS 445 (464)
Q Consensus 411 i~~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~~~ 445 (464)
+++|+|||++||++|++.++|++|||+ ||+++.
T Consensus 377 i~~SgHa~~~eL~~~~~~~~Pk~~ipv--HGe~~~ 409 (429)
T 2az4_A 377 LACSGHAIPEDLDKIIALIEPQVLVPI--HTLKPE 409 (429)
T ss_dssp CCCCSSCCHHHHHHHHHHHCCSEEEEE--SCSCGG
T ss_pred EeecCCCCHHHHHHHHHhhCCCEEEEC--CCCchh
Confidence 999999999999999999999999976 999764
No 11
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.97 E-value=3.4e-31 Score=291.13 Aligned_cols=274 Identities=14% Similarity=0.128 Sum_probs=200.9
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC--------CCCcEEeCHHHHHHHHHh
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--------SHGPIYCSPLTARLVRMC 182 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~--------~~~~Iy~s~~t~~~l~~~ 182 (464)
.++..+++|||........+..+..+. ....+||+|||||+|.||+||||.+. .+++||+++.|..+++..
T Consensus 22 ~~~~~ILID~G~~~~~~~~~~~l~~L~-~~~~~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~t~~l~~~~ 100 (717)
T 2i7x_A 22 FDNVTLLIDPGWNPSKVSYEQCIKYWE-KVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVS 100 (717)
T ss_dssp ETTEEEEECCCCCTTTSCHHHHHHHHH-TTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHHHHHHH
T ss_pred ECCeEEEEeCCCCcccchhhhHHHHHH-hcCCCCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecchhHHHHHHH
Confidence 578899999998642111110001110 11248999999999999999999642 368999999998866543
Q ss_pred hc-------cC-C---------------CceEEcCCCCEEEE----CCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECC
Q 012419 183 LL-------VN-P---------------SYIHPLELNTEHVI----DGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGD 235 (464)
Q Consensus 183 ~~-------~~-~---------------~~~~~v~~~~~~~i----~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD 235 (464)
+. .. + ..++++.+++.+.+ ++++|+++++||++|+++|.|+. ++.+|+||||
T Consensus 101 l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~Gs~~~~I~~-~~~~IvytGD 179 (717)
T 2i7x_A 101 TIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPGGSIWCIST-YSEKLVYAKR 179 (717)
T ss_dssp HHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTTCEEEEEEC-SSCEEEECSS
T ss_pred HHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCCCcEEEEEEe-CCCEEEEECC
Confidence 31 00 0 14678999999999 89999999999999999999997 4569999999
Q ss_pred CCCCcccccccc----------ccCCCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecccccHH
Q 012419 236 FRASRLMQSYPL----------LVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSIGKE 305 (464)
Q Consensus 236 ~~~~~~~~~~~~----------l~~~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s~Gr~ 305 (464)
++........+. ....++|+||+||||+.+. +|+++ ...++.+.+.++++.++ .|+||+|++||.
T Consensus 180 ~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~--h~~~~-~~~~l~~~i~~~l~~~G--~VlIp~fa~gR~ 254 (717)
T 2i7x_A 180 WNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSS--QPFKK-RSKIFKDTLKKGLSSDG--SVIIPVDMSGKF 254 (717)
T ss_dssp CCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCS--SCHHH-HHHHHHHHHHHHTSTTC--EEEEEECTTTHH
T ss_pred CCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCC--CCCHH-HHHHHHHHHHHHHhCCC--eEEEEeccchHH
Confidence 987655432110 1135899999999998864 36554 56688999988887766 499999999999
Q ss_pred HHHHHHHHHc-----------CCeEEEcccHH----HHHHhc-CC----------------Ccc-ccCc---c----ccC
Q 012419 306 SVFLAISKAL-----------GVKIYANASRR----RVLQSF-DW----------------PEL-SGNL---C----TQG 345 (464)
Q Consensus 306 qell~l~~~~-----------~~~I~v~~~~~----~i~~~~-~~----------------~~~-~~~~---~----~~~ 345 (464)
|+++.++..+ ++|||++++.+ ++++.+ +| |+. .+.+ . ...
T Consensus 255 qell~~l~~~~~~~~~~~~~~~~pI~l~g~~a~~~~~i~~~~~e~l~~~~~~~~~~~~~~~pf~~~~~l~~~~~~~l~~~ 334 (717)
T 2i7x_A 255 LDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSMLEWLSPSLLKTWENRNNTSPFEIGSRIKIIAPNELSKY 334 (717)
T ss_dssp HHHHHHHHHHHTTC-------CCCEEEECTTTTHHHHHHHTCGGGSCHHHHHHHHSSSSCCTTCCTTTEEECCGGGGGGC
T ss_pred HHHHHHHHHhhhhhhccccCCCceEEEECHHHHHHHHHHHHHHHHhChHHHHHHhcccccCCccccccCccCCHHHHhhC
Confidence 9999877543 48999999754 444443 22 222 1111 0 012
Q ss_pred CCceEEEEeCCCCChhhHHHHHhhhCCCCCCEEEEeeccccc-cCCcccccc
Q 012419 346 NDTLLHVLPMSSLKFETLKDYLKPYGNQYAAVLAFRPTGWTY-SETVGNQLD 396 (464)
Q Consensus 346 ~~~~V~v~~~~~l~~g~~~~~l~~~~~~~~~~i~~~~tG~~~-~~~~g~~l~ 396 (464)
..++|+++++ .+|+++++|++|+.+++|.|+| +||++ ++|.|++|.
T Consensus 335 ~~p~VI~aSG---~gG~~~~~L~~~a~~~~n~VIf--~g~~~p~gTlgr~l~ 381 (717)
T 2i7x_A 335 PGSKICFVSE---VGALINEVIIKVGNSEKTTLIL--TKPSFECASSLDKIL 381 (717)
T ss_dssp CSCEEEEEES---CHHHHHHHHHHHSSCTTEEEEE--CSSCCTTCHHHHHHH
T ss_pred CCCEEEEECC---CCHHHHHHHHHHcCCCcCEEEE--EcCCCCCCChHHHHH
Confidence 3477777765 6899999999999999999999 99999 699998875
No 12
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.79 E-value=9.7e-19 Score=177.84 Aligned_cols=200 Identities=19% Similarity=0.180 Sum_probs=131.7
Q ss_pred cCCCCchhcccc--ccccccceeeeecccCCCccccccCCCcccccccccCCCcccccCCce----eEEcCCCCCCCCC-
Q 012419 56 CGTDWSCLLQTE--RKLKQANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKI----VDRSCPFYKKIPG- 128 (464)
Q Consensus 56 ~~~~w~~~~~~~--~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~----~lidcG~~~~~~~- 128 (464)
.-.+||||||+| .+.|+++.+.+||+|+++.+.++.++.+.+.+.|+|.+...+..+... .+...|.....++
T Consensus 16 ~~~~~~~~l~~~~~~~~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~ 95 (360)
T 2wyl_A 16 TFPEWGSWLNEEIEQEQVAPGTFAMWWLGCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNL 95 (360)
T ss_dssp TCSTTTTHHHHHHHHCCCCTTCEEEEEEETTEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCC
T ss_pred cCCchhhhhhhhcccccCCCCcEEEEEecccEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCc
Confidence 347899999999 677999999999999988777754444555555555432211100000 0011122111111
Q ss_pred --CceEecCCCcCCCCCccEEEeCccchhhhc--Cccc---cC-CCCcEEeCHHHHHHHHHhhccCCCceEEcCCCCEEE
Q 012419 129 --TPFTVDAFRYGSIKGCSAYFLTHFHYDHYG--GLGK---RW-SHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHV 200 (464)
Q Consensus 129 --~~~~id~f~~~~i~~id~I~iTH~H~DHig--gL~~---~~-~~~~Iy~s~~t~~~l~~~~~~~~~~~~~v~~~~~~~ 200 (464)
.+..+++. .+.+||+|||||.|.||++ ++.. .. ...+||++..+.+.+.. ++.....+..+..|+.+.
T Consensus 96 ~~~p~~l~~~---~l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~~-~g~~~~~~~~l~~g~~~~ 171 (360)
T 2wyl_A 96 RTTPFVLDPF---AIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIG-WGVPKERCIVVKPGDVVK 171 (360)
T ss_dssp BCSCCCCCGG---GCCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHHH-HTCCGGGEEECCTTCEEE
T ss_pred ccCCCccCHH---HcCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHHH-cCCChheEEEcCCCCEEE
Confidence 11223332 3468999999999999996 2332 22 26899999998887754 344334688999999999
Q ss_pred ECCEEEEEEEcCCC------------C---------CceEEEEEeeCCcEEEEECCCCCCccccccccccCCCccEEEEe
Q 012419 201 IDGVKVTLLEANHC------------P---------GAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLD 259 (464)
Q Consensus 201 i~~~~v~~~~agH~------------~---------gs~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~E 259 (464)
+++++|+++++.|. + .+++|+|+. +|++|+|+||+.+........ ...++|++++.
T Consensus 172 ~g~~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~-~g~~i~~sGDt~~~~~~~~i~--~~~~~Dv~il~ 248 (360)
T 2wyl_A 172 VKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKT-PGGSLYHSGDSHYSNYYAKHG--NEHQIDVALGS 248 (360)
T ss_dssp ETTEEEEEEECCCC------------------CCTTTBEEEEEEE-TTEEEEECTTCCCCTTHHHHH--HHSCCCEEEEE
T ss_pred ECCEEEEEEeccCcccccccccccccccccccccCcccEEEEEEE-CCcEEEEeCCCCcCHHHHHHh--hCCCCCEEEec
Confidence 99999999999774 2 378999996 667999999999876543211 11378999997
Q ss_pred CCC
Q 012419 260 TTY 262 (464)
Q Consensus 260 sT~ 262 (464)
...
T Consensus 249 ~g~ 251 (360)
T 2wyl_A 249 YGE 251 (360)
T ss_dssp BCC
T ss_pred CCC
Confidence 653
No 13
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.79 E-value=4.4e-19 Score=172.39 Aligned_cols=194 Identities=11% Similarity=0.099 Sum_probs=129.8
Q ss_pred cCCceeEEcCCCCCC--CCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc-------------CCCCcEEeCHHH
Q 012419 111 HLKKIVDRSCPFYKK--IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR-------------WSHGPIYCSPLT 175 (464)
Q Consensus 111 ~~~~~~lidcG~~~~--~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~-------------~~~~~Iy~s~~t 175 (464)
.++..+++|||.... +.. . + ...+||+|||||.|.||++|++.. ....+||+++.+
T Consensus 50 ~~~~~iLiD~G~~~~~~l~~--~-~------~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 120 (268)
T 1zkp_A 50 HDGFRLLVDCGSGVLAQLQK--Y-I------TPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFD 120 (268)
T ss_dssp ETTEEEEECCCTTHHHHHTT--T-C------CGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSS
T ss_pred ECCcEEEEECCHHHHHHHHH--h-C------CcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccH
Confidence 467889999997421 111 0 1 236799999999999999999741 135799999998
Q ss_pred HHHHHHhhccCCCceEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCCccccccccccCCCccE
Q 012419 176 ARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNV 255 (464)
Q Consensus 176 ~~~l~~~~~~~~~~~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~Dl 255 (464)
.+.++...-.....+..+..++.+.+++++|+++++.|.+|+++|+++. ++++++|+||+.+.+... .. ..++|+
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~~~~~~~i~~-~~~~i~~~GD~~~~~~~~--~~--~~~~d~ 195 (268)
T 1zkp_A 121 ENGFHSLTHEPHTKGIPYNPEETLQIGPFSISFLKTVHPVTCFAMRITA-GNDIVVYSADSSYIPEFI--PF--TKDADL 195 (268)
T ss_dssp HHHHHTTCBTTTEEEEECCTTSCEEETTEEEEEEECCSSSCCEEEEEEE-TTEEEEECCSCCCCTTHH--HH--HTTCSE
T ss_pred HHHHHhcccCCccceEEecCCCeEEECCEEEEEEECCCCCCceEEEEEE-CCeEEEEeCCCCCCHHHH--HH--HcCCCE
Confidence 8776543211123467888999999999999999999999999999986 567999999999866532 22 268999
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecccc--cHHHHHHHHHHHcCCeEEEc
Q 012419 256 LYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI--GKESVFLAISKALGVKIYAN 322 (464)
Q Consensus 256 Li~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s~--Gr~qell~l~~~~~~~I~v~ 322 (464)
||+|+||.......+..+...++..+.+++ .+.+ .+++..|+. .+++.+.++.+.++.+|.+.
T Consensus 196 li~e~~~~~~~~~~~~~H~~~~~a~~~~~~---~~~~-~lil~H~~~~~~~~~~~~~~~~~~~~~v~~a 260 (268)
T 1zkp_A 196 FICECNMYAHQEAAKAGHMNSTEVASIAKD---ANVK-ELLLTHLPHTGNPADLVTEAKQIFSGHITLA 260 (268)
T ss_dssp EEEECCBCTTSCCGGGTCCBHHHHHHHHHH---TTCS-EEEEESBCSSSCTHHHHHHHHTTCCSEEEEC
T ss_pred EEEECCCCccccccCCCCCCHHHHHHHHHH---cCCC-EEEEECCCCCCChHHHHHHHHHhCCCCEEEE
Confidence 999999976432111112222333433332 2344 455556553 33443444545555566553
No 14
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.77 E-value=2.1e-18 Score=176.71 Aligned_cols=198 Identities=19% Similarity=0.170 Sum_probs=130.7
Q ss_pred CCCchhcccc--ccccccceeeeecccCCCccccccCCCcccccccccCCCcccccCCce----eEEcCCCCCCCCC---
Q 012419 58 TDWSCLLQTE--RKLKQANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKI----VDRSCPFYKKIPG--- 128 (464)
Q Consensus 58 ~~w~~~~~~~--~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~----~lidcG~~~~~~~--- 128 (464)
.+||+|||+| .+.++++.+.+||+|+++.+.++.++.+.+.+.|+|.+..+...+... .....|.....++
T Consensus 42 p~~~~~l~~~~~~~~~~~~~~~it~lG~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~ 121 (379)
T 3bv6_A 42 PEWGTWLNEEIEQTVVEPNTFSMWWLGCTGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRT 121 (379)
T ss_dssp STTTTHHHHHHHTCCCCTTCEEEEEEETTEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBC
T ss_pred CCccccchhhcccccCCCCceEEEEecccEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccC
Confidence 5799999998 678999999999999988777654444455555544422110000000 0000111111111
Q ss_pred CceEecCCCcCCCCCccEEEeCccchhhhc--Cccc---cC-CCCcEEeCHHHHHHHHHhhccCCCceEEcCCCCEEEEC
Q 012419 129 TPFTVDAFRYGSIKGCSAYFLTHFHYDHYG--GLGK---RW-SHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVID 202 (464)
Q Consensus 129 ~~~~id~f~~~~i~~id~I~iTH~H~DHig--gL~~---~~-~~~~Iy~s~~t~~~l~~~~~~~~~~~~~v~~~~~~~i~ 202 (464)
.+..+++. .+.+||+|||||.|.||++ ++.. .. ..++||++..+.+.+.. ++.....++.+..|+.+.++
T Consensus 122 ~p~~l~~~---~~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~~-~g~~~~~~~~l~~g~~~~~g 197 (379)
T 3bv6_A 122 SIFPLDPF---AIKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWLG-WGVPQERCIVAKVGDVLEIG 197 (379)
T ss_dssp SCCCSCGG---GCCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHHH-HTCCGGGEEECCTTCEEEET
T ss_pred CCCccChH---HCCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHHH-cCCChhhEEEeCCCCEEEEC
Confidence 11223321 3468999999999999995 3332 22 27899999998887764 34333468899999999999
Q ss_pred CEEEEEEEcCCC-------------CC---------ceEEEEEeeCCcEEEEECCCCCCccccccccccCCCccEEEEeC
Q 012419 203 GVKVTLLEANHC-------------PG---------AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDT 260 (464)
Q Consensus 203 ~~~v~~~~agH~-------------~g---------s~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~Es 260 (464)
+++|+++++.|. +| +++|+|+. +|++|+|+||+.+........ ...++|++++..
T Consensus 198 ~~~v~~~~~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~-~g~~i~~sGDt~~~~~~~~i~--~~~~~Dv~il~~ 274 (379)
T 3bv6_A 198 DVKIRVLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIET-SGGSVYHSGDSHYSNYYAKHG--NDYQIDVALLSY 274 (379)
T ss_dssp TEEEEEEECCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEE-TTEEEEECTTCCCCTTHHHHH--HHSCCSEEEEEB
T ss_pred CEEEEEEecccccccccccccccccccccccccCCceEEEEEEe-CCeEEEEeCCCCccHHHHHHh--hcCCCCEEEecC
Confidence 999999999873 22 79999996 678999999999876543211 113789999976
Q ss_pred CC
Q 012419 261 TY 262 (464)
Q Consensus 261 T~ 262 (464)
..
T Consensus 275 g~ 276 (379)
T 3bv6_A 275 GE 276 (379)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 15
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.75 E-value=1.7e-18 Score=168.56 Aligned_cols=176 Identities=15% Similarity=0.047 Sum_probs=118.5
Q ss_pred cCCCcccccCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc------C-----CCCcEEe
Q 012419 103 SNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR------W-----SHGPIYC 171 (464)
Q Consensus 103 g~~~~~~~~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~------~-----~~~~Iy~ 171 (464)
|...++.+.++..+++|||..... .+. ....+|++|||||.|.||++|++.+ . ..++||+
T Consensus 9 g~~~~~~~i~~~~iLiD~G~~~~~-----~l~----~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~ 79 (280)
T 2e7y_A 9 ALFSTWIYYSPERILFDAGEGVST-----TLG----SKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFY 79 (280)
T ss_dssp TTTEEEEEEGGGTEEEEECTTHHH-----HHG----GGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred CCceEEEEECCcEEEEECCcchHH-----Hhc----cCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEE
Confidence 333334444567899999974310 011 1236799999999999999999853 1 2479999
Q ss_pred CHHHHHHHHHhhc--------c-CCCceEEcCCCCEEEEC-----CEEEEEEEcCCCCC--ceEEEEEee----------
Q 012419 172 SPLTARLVRMCLL--------V-NPSYIHPLELNTEHVID-----GVKVTLLEANHCPG--AALIHFRLQ---------- 225 (464)
Q Consensus 172 s~~t~~~l~~~~~--------~-~~~~~~~v~~~~~~~i~-----~~~v~~~~agH~~g--s~~~~i~~~---------- 225 (464)
++.+. .+...+. . ....++.++.|+.+.++ +++|++++++|.++ +++|+|+..
T Consensus 80 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~~l~~~~~g 158 (280)
T 2e7y_A 80 PEGNR-AVEEYTEFIKRANPDLRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEFQG 158 (280)
T ss_dssp ETTCH-HHHHHHHHHHHHCGGGTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECGGGTT
T ss_pred CccHH-HHHHHHHHHhhcccCCCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCCCceEEEEEEEcccccCHhhcC
Confidence 98887 5553321 0 11357788999999998 89999999999999 999999731
Q ss_pred ----------------------CCcEEEEECCCCCCccccccccccCCCccEEEEeCCCCCCCC----CCCCHHHHHHHH
Q 012419 226 ----------------------DGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKY----KFPSKEDVLNYV 279 (464)
Q Consensus 226 ----------------------~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~EsT~~~~~~----~~p~~~~~~~~l 279 (464)
+|++|+|+||++.. . ... ..++|+||+||||.++.. .|.+. +++
T Consensus 159 ~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~--~--~~~--~~~~d~li~e~t~~~~~~~~~~~H~t~----~~a 228 (280)
T 2e7y_A 159 LDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL--D--PEE--IRGTELLIHECTFLDARDRRYKNHAAI----DEV 228 (280)
T ss_dssp CCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC--C--HHH--HTTCSCEEEECCBC--------CCCBH----HHH
T ss_pred CCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH--H--HHh--hcCCCEEEEeCCcCChhhHHhcCCCCH----HHH
Confidence 34689999999987 1 122 268999999999986532 23333 334
Q ss_pred HHHHHHHHHhCCCeEEEEecccc
Q 012419 280 VRLTKNCLKKQPKTLVVVGAYSI 302 (464)
Q Consensus 280 ~~~i~~~l~~~~~~~vli~~~s~ 302 (464)
.+.+++. +.+ .+++..|+.
T Consensus 229 ~~~~~~~---~~~-~lvl~H~~~ 247 (280)
T 2e7y_A 229 MESVKAA---GVK-KVILYHIST 247 (280)
T ss_dssp HHHHHHH---TCC-EEEEESCCG
T ss_pred HHHHHHc---CCC-EEEEEeecC
Confidence 4444332 333 466667765
No 16
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.75 E-value=4.6e-18 Score=168.07 Aligned_cols=144 Identities=17% Similarity=0.057 Sum_probs=108.8
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc---------CCCCcEEeCHHHHHHHHHh
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---------WSHGPIYCSPLTARLVRMC 182 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---------~~~~~Iy~s~~t~~~l~~~ 182 (464)
++..+++|||..... .+.... ....+||+|||||.|.||++|++.. ...++||+++.+.+.++..
T Consensus 32 ~~~~iliD~G~~~~~-----~l~~~~-~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~ 105 (306)
T 2cbn_A 32 QSGLWLFDCGEGTQH-----QLLHTA-FNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETA 105 (306)
T ss_dssp CCCEEEECCCTTHHH-----HHHTSC-CCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHH
T ss_pred CCcEEEEECCHHHHH-----HHHHhC-CCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHH
Confidence 677899999974310 011110 0236899999999999999999842 1356899999998887755
Q ss_pred hccC------CCceEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEee-------------------------------
Q 012419 183 LLVN------PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ------------------------------- 225 (464)
Q Consensus 183 ~~~~------~~~~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~------------------------------- 225 (464)
+... +..++.+..++.+.+++++|+++++.|..++++|.++.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~H~~~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v 185 (306)
T 2cbn_A 106 LRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTI 185 (306)
T ss_dssp HHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEECBSSSCCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCC
T ss_pred HHhhccCCCceEEEEEcCCCcEeecCCEEEEEEEccCCCCccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeE
Confidence 4321 125678888999999999999999999999999999841
Q ss_pred ------------------CCcEEEEECCCCCCccccccccccCCCccEEEEeCCCCCC
Q 012419 226 ------------------DGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNP 265 (464)
Q Consensus 226 ------------------~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~EsT~~~~ 265 (464)
+|++|+|+||++..+... .. ..++|+||+||||.+.
T Consensus 186 ~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~~~~--~~--~~~~D~li~E~t~~~~ 239 (306)
T 2cbn_A 186 TLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAAL--DL--AKGVDVMVHEATLDIT 239 (306)
T ss_dssp EETTTEECCGGGTBCCCCCCCEEEECCSCBSCSTHH--HH--HTTCSEEEEECCBCGG
T ss_pred EcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHHHHH--HH--hcCCCEEEEECcCChh
Confidence 467899999999876432 22 2689999999999864
No 17
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.74 E-value=4.9e-18 Score=164.48 Aligned_cols=143 Identities=17% Similarity=0.096 Sum_probs=105.5
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC----CCCcEEeCHHHHHHHHHhhccC
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW----SHGPIYCSPLTARLVRMCLLVN 186 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~----~~~~Iy~s~~t~~~l~~~~~~~ 186 (464)
.++..+++|||... ....+++ .+||+|||||.|.||++|++.+. ..++||+++.+..+ ...+...
T Consensus 46 ~~~~~iLiD~G~~~----~~~~~~~------~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~-~~~~~~~ 114 (258)
T 3g1p_A 46 FNDAITLIDAGLHD----LADRWSP------GSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGC-DDLFKHP 114 (258)
T ss_dssp ETTEEEEECCCCTT----HHHHCCT------TSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCS-TTTTTSC
T ss_pred ECCcEEEEECCchH----HHhhcCc------ccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhH-HHHhcCC
Confidence 57889999999432 1111222 68999999999999999998643 24789999887621 1111111
Q ss_pred C-Cc-eEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCCccccccccccCCCccEEEEeCCCCC
Q 012419 187 P-SY-IHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCN 264 (464)
Q Consensus 187 ~-~~-~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~EsT~~~ 264 (464)
. .. ..++..++.+.+++++|+++++.|.+++++|+|+. +|++++|+||+...++... ..+...++|+||+|+||..
T Consensus 115 ~~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~~~~g~~i~~-~~~~i~~~GDt~~~~~~~~-~~l~~~~~Dlli~e~t~~~ 192 (258)
T 3g1p_A 115 GLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLET-AHSRVAWLSDTAGLPEKTL-KFLRNNQPQVMVMDCSHPP 192 (258)
T ss_dssp TTEEEEEECCTTCCEEETTEEEEEEECCSSSCCEEEEEEC-SSCEEEEECSCSSCCHHHH-HHHHHTCCSEEEEECCBSS
T ss_pred CccccccccCCCCeEEECCEEEEEEECCCCCCceEEEEEe-CCcEEEEECCCCCCCHHHH-HHHHhCCCCEEEEeCCCCC
Confidence 1 12 25789999999999999999999999999999996 6779999999998765322 2221258999999999976
Q ss_pred CC
Q 012419 265 PK 266 (464)
Q Consensus 265 ~~ 266 (464)
..
T Consensus 193 ~~ 194 (258)
T 3g1p_A 193 RA 194 (258)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 18
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.74 E-value=4.9e-18 Score=169.20 Aligned_cols=144 Identities=19% Similarity=0.188 Sum_probs=108.6
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc---------CCCCcEEeCHHHHHHHHHh
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---------WSHGPIYCSPLTARLVRMC 182 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---------~~~~~Iy~s~~t~~~l~~~ 182 (464)
++..+++|||..... .+.... ....+||+|||||.|.||++|++.+ ...++||+++.+.+.++..
T Consensus 30 ~~~~iLiD~G~~~~~-----~l~~~~-~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 103 (320)
T 1y44_A 30 RRSVWLFDCGEATQH-----QMLHTT-IKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETS 103 (320)
T ss_dssp TSEEEEECCCTTHHH-----HHTTSS-CCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHH
T ss_pred CCcEEEEECCHHHHH-----HHHHcC-CCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHH
Confidence 677899999974310 011110 0236899999999999999999842 1357899999998877654
Q ss_pred hccC------CCceEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEee-------------------------------
Q 012419 183 LLVN------PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQ------------------------------- 225 (464)
Q Consensus 183 ~~~~------~~~~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~------------------------------- 225 (464)
+... ...++.+..++.+.+++++|++++++|.+++++|.++..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~p~~H~~~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v 183 (320)
T 1y44_A 104 LAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETV 183 (320)
T ss_dssp HHHTTCCCSSCEEEEECCSEEEEECSSEEEEEEECBSSSSBEEEEEEECCBCCCC-------------------------
T ss_pred HHhhccCCCCceEEEEcCCCceEecCCEEEEEEEccCCCCcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeE
Confidence 3211 234678888999999999999999999999999999741
Q ss_pred ------------------CCcEEEEECCCCCCccccccccccCCCccEEEEeCCCCCC
Q 012419 226 ------------------DGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNP 265 (464)
Q Consensus 226 ------------------~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~EsT~~~~ 265 (464)
+|++|+|+||++..+... .. ..++|+||+||||.+.
T Consensus 184 ~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~~~~--~~--~~~~D~li~E~t~~~~ 237 (320)
T 1y44_A 184 TLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDKLK--EL--ARDCDVMVHEATFAKE 237 (320)
T ss_dssp -------------CCCCBCCCEEEECCSCBCCHHHH--HH--TTTCSEEEEECCBCTT
T ss_pred EcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHHHHH--HH--hCCCCEEEEeccCCcc
Confidence 467999999999876432 22 3689999999999874
No 19
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.65 E-value=5.6e-16 Score=152.87 Aligned_cols=165 Identities=15% Similarity=0.108 Sum_probs=116.8
Q ss_pred ceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc-------CCCCcEEeCHHHHHHHHHhhccC
Q 012419 114 KIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR-------WSHGPIYCSPLTARLVRMCLLVN 186 (464)
Q Consensus 114 ~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~-------~~~~~Iy~s~~t~~~l~~~~~~~ 186 (464)
..+++|||..... .+-. ..+.+||+|||||.|.||++|++.+ ...++||+++.+.+.++..+...
T Consensus 78 ~~iLID~G~~~~~-----~l~~---~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~ 149 (293)
T 3md7_A 78 TVVVIDTGPDFRM-----QMID---SGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYC 149 (293)
T ss_dssp EEEEECCCTTHHH-----HHHH---HTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGG
T ss_pred eEEEEECCccHHH-----HHHh---cCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhh
Confidence 6899999964321 0000 1237899999999999999999853 35789999999998887654310
Q ss_pred -----------CCceEEcCCCCEEEECC----EEEEEEEcCCC-CCceEEEEEeeCCcEEEEECCCCCCccccccccccC
Q 012419 187 -----------PSYIHPLELNTEHVIDG----VKVTLLEANHC-PGAALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVN 250 (464)
Q Consensus 187 -----------~~~~~~v~~~~~~~i~~----~~v~~~~agH~-~gs~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~ 250 (464)
...++.++.++++.+++ ++|+++++.|. .++++|+|+ +++|+||+...++... .. .
T Consensus 150 ~~~~~~~~~~~~~~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~-----~~~y~gDt~~~~~~~~-~~--~ 221 (293)
T 3md7_A 150 FETPVGSSYPPILSMHDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG-----SVVYCTDVSAFPEQSL-QY--I 221 (293)
T ss_dssp TSCCTTCCCCCCEEEEECCTTCCEEECCTTCCEEEEEEEEEETTEEEEEEEET-----TEEEECSCSBCCGGGH-HH--H
T ss_pred hccccccCCCCceEEEEcCCCCcEEECCCCCcEEEEEEEecCCCCCEEEEEEe-----EEEEECCCCCCCHHHH-HH--h
Confidence 12467889999999999 99999999997 699999886 5999999985433222 22 2
Q ss_pred CCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEecccc
Q 012419 251 HRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVVVGAYSI 302 (464)
Q Consensus 251 ~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vli~~~s~ 302 (464)
.++|+||+|+++..+...|.+.+++ ++.+++. +.+ .+++..++-
T Consensus 222 ~~~Dlli~e~~~~~~~~~H~~~~~a----~~~~~~~---~~k-~lvl~H~~~ 265 (293)
T 3md7_A 222 KDADVLIIGALQYRPHPSHFSLGEA----LEWIEKL---SPK-RAILTHMHV 265 (293)
T ss_dssp TTCSEEEEECCCSSCBTTBCCHHHH----HHHHHHH---CCS-EEEEESBCT
T ss_pred cCCCEEEEeCccCCCCCCCCCHHHH----HHHHHHc---CCC-EEEEECCCC
Confidence 6899999999876654444444433 3333332 444 455666654
No 20
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.64 E-value=8.5e-17 Score=164.10 Aligned_cols=145 Identities=14% Similarity=0.044 Sum_probs=101.2
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC-------------CCCcEEeCHHHHH
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-------------SHGPIYCSPLTAR 177 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~-------------~~~~Iy~s~~t~~ 177 (464)
.++..+++|||......-....++ ..+||+|||||.|.||++||+.+. ..++||+++.+.+
T Consensus 26 ~~~~~iLiD~G~g~~~~l~~~~~~------~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~ 99 (368)
T 3zwf_A 26 CEGECWLFDCGEGTQTQLMKSQLK------AGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRD 99 (368)
T ss_dssp ETTEEEEECCCTTHHHHHHHSSSC------GGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHH
T ss_pred ECCeEEEEeCChhHHHHHHHcCCC------hHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHH
Confidence 467889999997431000001122 258999999999999999998421 2679999999998
Q ss_pred HHHHhhccC------CCceEEcCC---------------------------CCEE------------EECCEEEEEEEcC
Q 012419 178 LVRMCLLVN------PSYIHPLEL---------------------------NTEH------------VIDGVKVTLLEAN 212 (464)
Q Consensus 178 ~l~~~~~~~------~~~~~~v~~---------------------------~~~~------------~i~~~~v~~~~ag 212 (464)
.+...+... +..++.+.. |+.+ +.++++|+++++.
T Consensus 100 ~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~V~a~~~~ 179 (368)
T 3zwf_A 100 FIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKAFRLF 179 (368)
T ss_dssp HHHHHHHHTTCCCSSCEEEEEECCCGGGSCC-------------------CCCEECCBTTTTBEEEEECSSEEEEEEEEE
T ss_pred HHHHHHHhhCcCCCceEEEEEeecCccccccccccccccccccccCcccccccccccccccCceeEEeCCCEEEEEEecc
Confidence 877654321 122344432 3322 3378999999999
Q ss_pred CCCCceEEEEEeeC-------------------------------------------------CcEEEEECCCCC--Ccc
Q 012419 213 HCPGAALIHFRLQD-------------------------------------------------GQCYLHTGDFRA--SRL 241 (464)
Q Consensus 213 H~~gs~~~~i~~~~-------------------------------------------------g~~ilytGD~~~--~~~ 241 (464)
|...+++|+|+.++ |++|+|+||++. ...
T Consensus 180 H~vp~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~~ 259 (368)
T 3zwf_A 180 HRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDG 259 (368)
T ss_dssp SSSCEEEEEEEECC------------------------------------------------CCCEEEEECSCSEECSSH
T ss_pred CCCceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhccccccceEEEEEecCCcccchh
Confidence 99999999997531 778999999987 322
Q ss_pred ccccccccCCCccEEEEeCCCCCC
Q 012419 242 MQSYPLLVNHRVNVLYLDTTYCNP 265 (464)
Q Consensus 242 ~~~~~~l~~~~~DlLi~EsT~~~~ 265 (464)
.. .. ..++|+||+|+||.+.
T Consensus 260 ~~--~~--~~~~Dlli~Eat~~~~ 279 (368)
T 3zwf_A 260 GV--KL--CFEADLLIHEATLDDA 279 (368)
T ss_dssp HH--HH--TTTCSEEEEECCSCGG
T ss_pred HH--HH--hcCCCEEEEecCCChH
Confidence 21 22 3789999999999864
No 21
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.63 E-value=3.8e-15 Score=142.50 Aligned_cols=191 Identities=13% Similarity=0.046 Sum_probs=129.1
Q ss_pred ccceeeeecccCCCccccccCCCcccccccccCCCcccccCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCc
Q 012419 72 QANLFDMWGLKSNSESEANCLFSPPMKKLKASNGKSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTH 151 (464)
Q Consensus 72 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH 151 (464)
+++...+||++....... .++..+++|||..... + ..+.++|+|||||
T Consensus 26 ~~~~~~it~lg~s~~li~---------------------~~~~~iliDpg~~~~~------~-----~~~~~id~VliTH 73 (235)
T 3kl7_A 26 SGKELTITFIKHGSLMLT---------------------YDNHSIQVDPVSEYAD------Y-----TTFPKADIILITH 73 (235)
T ss_dssp TSCEEEEEEEETTEEEEE---------------------ETTEEEEESCCTTTCC------T-----TSSCCCSEEEECC
T ss_pred CCCCeEEEEEcceEEEEE---------------------ECCEEEEECCCCCccc------h-----hhCCCCCEEEECC
Confidence 466777888776543322 2456899999975421 1 1336899999999
Q ss_pred cchhhhcCccc----cCCCCcEEeCHHHHHHHHHhhccCCCceEEcCCCC-EEEECCEEEEEEEcCCCCC----------
Q 012419 152 FHYDHYGGLGK----RWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNT-EHVIDGVKVTLLEANHCPG---------- 216 (464)
Q Consensus 152 ~H~DHiggL~~----~~~~~~Iy~s~~t~~~l~~~~~~~~~~~~~v~~~~-~~~i~~~~v~~~~agH~~g---------- 216 (464)
.|.||+ ++.. ...+++||+++.+.+.+. +...+..|+ ++.+++++|+++++.|.++
T Consensus 74 ~H~DH~-~~~~l~~~~~~~~~v~~~~~~~~~l~--------~~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~ 144 (235)
T 3kl7_A 74 EHGDHL-DPKAIQAVEKSDTEIIANENSQKKLG--------KGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHR 144 (235)
T ss_dssp SSTTTC-CHHHHHHHCCTTCEEEECHHHHHHHT--------CSEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTT
T ss_pred CccccC-CHHHHHHhhcCCCEEEEcHHHHHHhc--------CcEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCC
Confidence 999999 5442 245789999999887652 357889999 9999999999999998542
Q ss_pred ceEEEEEeeCCcEEEEECCCCCCccccccccccCCCccEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEE
Q 012419 217 AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCNPKYKFPSKEDVLNYVVRLTKNCLKKQPKTLVV 296 (464)
Q Consensus 217 s~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~EsT~~~~~~~~p~~~~~~~~l~~~i~~~l~~~~~~~vl 296 (464)
+++|+|+. +|++++|+||+.+.++.. . ..++|++++++... .+-+.+++.+ .+++. +++ .++
T Consensus 145 ~~g~~i~~-~g~~i~~~GDt~~~~~~~---~--l~~~Dv~il~~~~~----~h~~~~ea~~----~~~~l---~~k-~vi 206 (235)
T 3kl7_A 145 DNGYILTF-DGLRVYIAGDTEDIPEMK---D--LKDIDIAFLPVNQP----YTMTVSQAAK----AARMF---SPK-ILY 206 (235)
T ss_dssp SEEEEEEE-TTEEEEECCSCCSCGGGG---G--CCSCSEEEEECCTT----TSCCHHHHHH----HHHHH---CCS-EEE
T ss_pred ceEEEEEe-CCeEEEEECCCCchhhHH---h--hcCCCEEEECCCCC----cccCHHHHHH----HHHHc---CCC-EEE
Confidence 58999996 778999999999887542 2 25899999999631 1234444433 22222 455 343
Q ss_pred EecccccHHHHHHHHHHHcCCeEEE
Q 012419 297 VGAYSIGKESVFLAISKALGVKIYA 321 (464)
Q Consensus 297 i~~~s~Gr~qell~l~~~~~~~I~v 321 (464)
...|.....+++.+.+++.++++.+
T Consensus 207 p~H~~~~~~~~~~~~l~~~gi~v~~ 231 (235)
T 3kl7_A 207 PYHYGDTKIGELKDALKDSGIDVRI 231 (235)
T ss_dssp EESCTTCCTTHHHHHTTTSCCEECC
T ss_pred EEcCCCCCHHHHHHHHhhCCCEEEE
Confidence 4455443334455555555666654
No 22
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.59 E-value=1.2e-15 Score=152.83 Aligned_cols=149 Identities=14% Similarity=0.101 Sum_probs=105.7
Q ss_pred CCce-eEEcCCCCCC--CCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc--CCCCcEEeCHHHHHHHHHhh---
Q 012419 112 LKKI-VDRSCPFYKK--IPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR--WSHGPIYCSPLTARLVRMCL--- 183 (464)
Q Consensus 112 ~~~~-~lidcG~~~~--~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~--~~~~~Iy~s~~t~~~l~~~~--- 183 (464)
++.. +++|||.... +.... .+.+.......+||+|||||.|.||++|++.+ ...++||+++.+.+.++..+
T Consensus 49 ~~~~~iLiD~G~~~~~~l~~~~-~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~~~~~vy~~~~~~~~l~~~~~~f 127 (321)
T 3jxp_A 49 DGVHWILCNASPDIRAQLQAFA-PMQPARALRDTGINAIVLLDSQIDHTTGLLSLREGCPHQVWCTDMVHQDLTTGFPLF 127 (321)
T ss_dssp SSSSEEEECCCTTHHHHHHTCG-GGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGGCCEEEEECHHHHHHTTTTSCHH
T ss_pred CCceEEEEeCCchHHHHHHhcc-cccccccCCcccCCEEEECCCChhhhhhHHHHHhcCCCeEEECHHHHHHHHhhCccc
Confidence 4444 9999997431 00100 00110001237899999999999999999964 35789999999988776322
Q ss_pred cc-C----CCceEEcCCCCEEEE---CCEEEEEEEcC--------CC-----CCceEEEEEe-eCCcEEEEECCCCCCcc
Q 012419 184 LV-N----PSYIHPLELNTEHVI---DGVKVTLLEAN--------HC-----PGAALIHFRL-QDGQCYLHTGDFRASRL 241 (464)
Q Consensus 184 ~~-~----~~~~~~v~~~~~~~i---~~~~v~~~~ag--------H~-----~gs~~~~i~~-~~g~~ilytGD~~~~~~ 241 (464)
.. . ...++++.+++++.+ ++++|+++++. |. ..+++|+|+. .+|++++|+||++..++
T Consensus 128 ~~~~~~~~~i~~~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~~~~~ 207 (321)
T 3jxp_A 128 NMLSHWNGGLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDE 207 (321)
T ss_dssp HHHTTTTTCEEEEECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCH
T ss_pred cccccccCceeEEEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCCCCCH
Confidence 11 1 134678899999999 99999999997 64 4789999982 26789999999987544
Q ss_pred ccccccccCCCccEEEEeCCCCC
Q 012419 242 MQSYPLLVNHRVNVLYLDTTYCN 264 (464)
Q Consensus 242 ~~~~~~l~~~~~DlLi~EsT~~~ 264 (464)
... ..+ .++|+||+|||+..
T Consensus 208 ~~~-~~~--~~~D~li~eat~~~ 227 (321)
T 3jxp_A 208 KLL-AMM--HGADCLLVDGTLWE 227 (321)
T ss_dssp HHH-HHH--HHCSEEEEECCCSS
T ss_pred HHH-HHh--cCCCEEEEeCCCCC
Confidence 322 222 57999999999865
No 23
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.56 E-value=2.3e-14 Score=139.22 Aligned_cols=115 Identities=17% Similarity=0.193 Sum_probs=89.4
Q ss_pred CccEEEeCccchhhhcCccc--cCCCCcEEeC-HHHHHHHHHhhccCCCceEEcCCCCEEEECCEEEEEEEcCCCCC---
Q 012419 143 GCSAYFLTHFHYDHYGGLGK--RWSHGPIYCS-PLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPG--- 216 (464)
Q Consensus 143 ~id~I~iTH~H~DHiggL~~--~~~~~~Iy~s-~~t~~~l~~~~~~~~~~~~~v~~~~~~~i~~~~v~~~~agH~~g--- 216 (464)
++|+|||||.|.||+++++. ...+.+||++ ..+...++.. +. ..+..+ ++++++++++|+++++.|.++
T Consensus 64 ~id~iliTH~H~DH~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-g~--~~~~~~--~~~~~~~~~~i~~~pa~H~~~~~~ 138 (264)
T 3rpc_A 64 NVTAVVVTHTHLDHWDDTAINSIPKSLPIFVQNTADKELITSQ-GF--IDVRII--FESLEFNGITLRKTGGSHGTVEMY 138 (264)
T ss_dssp TCCEEECSCCCGGGSCHHHHHHSCTTSCEEESSHHHHHHHHHT-TC--SCEEEC--SSEEEETTEEEEEECCCSSCHHHH
T ss_pred cCCEEEECCCchhhCCCHHHHhhccCCeEEEeCHHHHHHHHhc-CC--CeeEEe--cccEEECCEEEEEeccccCCcccc
Confidence 79999999999999999874 3457899999 8887776542 33 234444 689999999999999999764
Q ss_pred -----------ceEEEEEeeCCcEEEEECCCCCCccccccccccCCCccEEEEeCCCCC
Q 012419 217 -----------AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTTYCN 264 (464)
Q Consensus 217 -----------s~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~EsT~~~ 264 (464)
+++|+|+.++|++++|+||+.+.++..... ...++|+++++++...
T Consensus 139 ~~p~~~~~~~~~~g~~i~~~~~~~i~~~GDt~~~~~~~~~~--~~~~~Dv~il~~g~~~ 195 (264)
T 3rpc_A 139 ANPVLAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKAL--LRFDPNVIIMNTGYAQ 195 (264)
T ss_dssp TSTTHHHHHCCCCEEEEECTTSCCEEECCSCCSCHHHHHHH--HHHCCSEEEEECSCBC
T ss_pred ccccccccccccEEEEEEeCCccEEEEECCcCchHHHHHHH--HHhCCCEEEEecCccc
Confidence 589999974467999999999987643211 1236899999998653
No 24
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.41 E-value=5.6e-13 Score=129.32 Aligned_cols=99 Identities=17% Similarity=0.194 Sum_probs=77.6
Q ss_pred CCccEEEeCccchhhhcCccccCCCCcEEeCHHHHHHHHHhhcc-----------------CCCceEEcC-CCCEEEEC-
Q 012419 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLV-----------------NPSYIHPLE-LNTEHVID- 202 (464)
Q Consensus 142 ~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~-----------------~~~~~~~v~-~~~~~~i~- 202 (464)
.+|++||+||.|.||+||++.. .+.+||+++.+.+.+...... ....+..++ .++.+.++
T Consensus 102 ~~i~~VilTH~H~DH~gg~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 180 (276)
T 2r2d_A 102 DDISTVVLSHLHNDHAGCVEYF-GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAP 180 (276)
T ss_dssp GGCSEEECSCCSTTTSTTGGGC-SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEET
T ss_pred HHCCEEEecCcccccCCChhhC-CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCCCceeEecC
Confidence 5799999999999999999976 678999999888765432210 123466777 48889885
Q ss_pred CEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCCcc
Q 012419 203 GVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASRL 241 (464)
Q Consensus 203 ~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~~~ 241 (464)
+++|.....||++|+++|+++.+++.+++|+||+.....
T Consensus 181 ~~~v~~~~pgHt~g~~~~~~~~~~~~~vl~~GD~~~~~~ 219 (276)
T 2r2d_A 181 GVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTAT 219 (276)
T ss_dssp TEEEEEEESSSSSSEEEEEEECSSSCEEEEEETTSCCHH
T ss_pred CEEEEeCCCCCCceeEEEEEEcCCCceEEEEechhhhHH
Confidence 899998833999999999999633268999999988653
No 25
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.38 E-value=2.4e-13 Score=139.22 Aligned_cols=121 Identities=16% Similarity=0.109 Sum_probs=90.9
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcC-CCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHHHHHHhhccCC
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNP 187 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~-~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~ 187 (464)
++..+++|||....... .++.+... ...+|++||+||.|.||++|++.. .++.+||+++.+.+.+...++...
T Consensus 42 ~~~~iliD~G~~~~~~~---~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~ 118 (402)
T 1e5d_A 42 DEKTTLFDTVKAEYKGE---LLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAMESHFHYKD 118 (402)
T ss_dssp SSSCEEECCCCGGGHHH---HHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEEEHHHHHHHHHHHCCSS
T ss_pred CCCEEEEeCCCCccHHH---HHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHCCCCEEEEChHHHHHHHHHhCCCC
Confidence 45689999997521000 11111100 236899999999999999999863 347899999999988877665444
Q ss_pred CceEEcCCCCEEEECCEEEEEEEc--CCCCCceEEEEEeeCCcEEEEECCCCC
Q 012419 188 SYIHPLELNTEHVIDGVKVTLLEA--NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 188 ~~~~~v~~~~~~~i~~~~v~~~~a--gH~~gs~~~~i~~~~g~~ilytGD~~~ 238 (464)
..+..++.++.+.+++.+++++++ ||++|++++++. + .+++|+||+..
T Consensus 119 ~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~~--~-~~~l~~GD~~~ 168 (402)
T 1e5d_A 119 WPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWFA--D-EKVLISNDIFG 168 (402)
T ss_dssp CCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEET--T-TTEEEEETTTC
T ss_pred CceEEcCCCCEEEECCCEEEEEeCCCCCCCCcEEEEEC--C-CCEEEeccccc
Confidence 567889999999999999999988 699999998764 3 36999999943
No 26
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.38 E-value=3.6e-13 Score=131.81 Aligned_cols=126 Identities=13% Similarity=0.136 Sum_probs=90.9
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCC--CCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHhhc--
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGS--IKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLL-- 184 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~--i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~-- 184 (464)
.++..++||||...... ..++.+.... ..+|++||+||.|.||++|++... .+++||+++.+...+.....
T Consensus 62 ~~~~~iLID~G~~~~~~---~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~ 138 (294)
T 3m8t_A 62 TSQGLILMDTAMPQSTG---MIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGGYYPG 138 (294)
T ss_dssp ETTEEEEECCCCGGGHH---HHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHHCCEEEEEGGGHHHHHHTCBTT
T ss_pred ECCceEEEECCCchhHH---HHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhccCCEEEEChHHHHHHhcccccC
Confidence 46678999999732111 0111111111 147999999999999999998632 57899999999988765421
Q ss_pred --------c-CCCceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCC---cEEEEECCCCCC
Q 012419 185 --------V-NPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDG---QCYLHTGDFRAS 239 (464)
Q Consensus 185 --------~-~~~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g---~~ilytGD~~~~ 239 (464)
. .......+..++.+.+++.+|+++++ ||++|+++|+++..++ .+++|+||+...
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~~~~~~~lf~GD~~~~ 206 (294)
T 3m8t_A 139 DEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREVLFFCSGTVA 206 (294)
T ss_dssp BTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCT
T ss_pred ccccccCCCCCCCCceEeCCCCEEEeCCEEEEEEeCCCCCccCEEEEEEccCCCccceEEEEcCccCC
Confidence 0 11224678889999999999999996 8999999999986443 279999999743
No 27
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.38 E-value=1.4e-13 Score=133.42 Aligned_cols=120 Identities=14% Similarity=0.031 Sum_probs=89.5
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccc---cCCCCcEEeCHHHHHHHHHhhccCCC
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGK---RWSHGPIYCSPLTARLVRMCLLVNPS 188 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~---~~~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (464)
++..++||||...........+... ....+|++||+||.|.||+||++. ..++++||+++.+...+...+.....
T Consensus 50 ~~~~iLID~G~~~~~~~~~~~l~~~--~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~l~~~~~~~~~ 127 (262)
T 3hnn_A 50 GDKTAIIDPPVESFMKIYLEALQQT--VNLKKLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLRAAFPDDNL 127 (262)
T ss_dssp SSSEEEECCCCHHHHHHHHHHHHHH--SCGGGEEEEECSSCCGGGHHHHHHHHHHCTTCEEEECHHHHHHHHHHSSSSCC
T ss_pred CCCEEEEECCCcchHHHHHHHHHHh--CChhhCCEEEECCCCcchhchHHHHHHHCCCCEEEECHHHHHHHHHHhCCCCC
Confidence 3678999999742100000000000 012679999999999999999985 34588999999999988776654445
Q ss_pred ceEEcCCCCEEEEC-CEEEEEEEc-C-CCCCceEEEEEeeCCcEEEEECCC
Q 012419 189 YIHPLELNTEHVID-GVKVTLLEA-N-HCPGAALIHFRLQDGQCYLHTGDF 236 (464)
Q Consensus 189 ~~~~v~~~~~~~i~-~~~v~~~~a-g-H~~gs~~~~i~~~~g~~ilytGD~ 236 (464)
....++.|+.+.++ +.+++++++ | |++|++++.+. + .+++||||+
T Consensus 128 ~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~~--~-~~~lfsGD~ 175 (262)
T 3hnn_A 128 NILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYDV--Q-TQILYTDKI 175 (262)
T ss_dssp EEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEET--T-TTEEEEETT
T ss_pred ceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEeC--C-CCEEEEeec
Confidence 67889999999998 899999988 6 99999988764 3 369999999
No 28
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.37 E-value=5.1e-13 Score=129.03 Aligned_cols=127 Identities=11% Similarity=0.133 Sum_probs=89.2
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHhh-----
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCL----- 183 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~----- 183 (464)
.++..+++|||...........+..... ...+|++||+||.|.||++|++... ++++||+++.+...+....
T Consensus 32 ~~~~~iLID~G~~~~~~~l~~~l~~~g~-~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~ 110 (263)
T 1k07_A 32 TPRGNILINSDLEANVPMIKASIKKLGF-KFSDTKILLISHAHFDHAAGSELIKQQTKAKYMVMDEDVSVILSGGKSDFH 110 (263)
T ss_dssp ETTEEEEECCCCGGGHHHHHHHHHHTTC-CGGGEEEEECSSSSHHHHTTHHHHHHHHCCEEEEEHHHHHHHHTTTTTCTT
T ss_pred eCCceEEEECCCcccHHHHHHHHHHcCC-CHHHCcEEEeCCCCccccccHHHHHHhcCCEEEEcHHHHHHHhcccccccc
Confidence 4567899999974210000001111100 1247999999999999999998632 4689999999988775421
Q ss_pred -c------c-CCCceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEee-CC--cEEEEECCCCC
Q 012419 184 -L------V-NPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQ-DG--QCYLHTGDFRA 238 (464)
Q Consensus 184 -~------~-~~~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~-~g--~~ilytGD~~~ 238 (464)
+ . .......+..++.+.+++.+|+++++ ||++|+++|+++.. +| .+++|+||+..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~g~~~~~~~~~~~~~~~~~lf~GD~~~ 177 (263)
T 1k07_A 111 YANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIGV 177 (263)
T ss_dssp TTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEEECCCCC
T ss_pred cCccccccCCCCCcceEeCCCCEEEECCeEEEEEECCCCCCCcEEEEEecccCCceeEEEEECCccc
Confidence 1 0 01234668889999999999999987 89999999999853 24 27999999865
No 29
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.34 E-value=1.2e-12 Score=133.96 Aligned_cols=121 Identities=14% Similarity=0.185 Sum_probs=90.6
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcC----CCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHHHHHHhh
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG----SIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCL 183 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~----~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~ 183 (464)
.++..+++|||....... .++.+... ...+|++||+||.|.||++|++.. .++.+||+++.+.+.+...+
T Consensus 42 ~~~~~iLiD~g~~~~~~~---~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~~~~~~~~~~~~ 118 (404)
T 2ohh_A 42 GDEGVALIDNSYPGTFDE---LMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKGLLKHY 118 (404)
T ss_dssp CSSCEEEECCCCTTCHHH---HHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEECHHHHHHHHHHC
T ss_pred eCCcEEEEeCCCCccHHH---HHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHCCCCEEEECHHHHHHHHHHh
Confidence 456689999997421110 11111100 126899999999999999999853 45789999999988887655
Q ss_pred ccC-CCceEEcCCCCEEEECCEEEEEEEc--CCCCCceEEEEEeeCCcEEEEECCCC
Q 012419 184 LVN-PSYIHPLELNTEHVIDGVKVTLLEA--NHCPGAALIHFRLQDGQCYLHTGDFR 237 (464)
Q Consensus 184 ~~~-~~~~~~v~~~~~~~i~~~~v~~~~a--gH~~gs~~~~i~~~~g~~ilytGD~~ 237 (464)
+.+ ...+..+..++.+.+++.+++++++ ||++|+++++++ + .+++|+||+-
T Consensus 119 ~~~~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~~~~~~~~~--~-~~~lf~GD~~ 172 (404)
T 2ohh_A 119 PSLREAEFMTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLLD--E-DGILFSNDAF 172 (404)
T ss_dssp GGGGGSCEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEEE--T-TTEEECTTTT
T ss_pred cccccCCceEcCCCCEEEECCEEEEEEeCCCCCCCCceEEEEC--C-CcEEEecCcc
Confidence 432 2357889999999999999999998 599999999886 3 3699999986
No 30
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.33 E-value=1.3e-12 Score=133.48 Aligned_cols=129 Identities=11% Similarity=0.056 Sum_probs=93.0
Q ss_pred cCCCcccc-cCCceeEEcCCCCCCCCCCceEecCCCc-CCCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHH
Q 012419 103 SNGKSTAT-HLKKIVDRSCPFYKKIPGTPFTVDAFRY-GSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTAR 177 (464)
Q Consensus 103 g~~~~~~~-~~~~~~lidcG~~~~~~~~~~~id~f~~-~~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~ 177 (464)
|+..|+.. .++..+++|||....... .++.+.. ....+|++||+||.|.||++|++.. .++.+||+++.+.+
T Consensus 33 g~~~n~~li~~~~~iliD~g~~~~~~~---~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~ 109 (398)
T 1ycg_A 33 GTTYNAYLIVDDKTALVDTVYEPFKEE---LIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFD 109 (398)
T ss_dssp CEEECCEEECSSSCEEECCCCGGGHHH---HHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEECHHHHH
T ss_pred CeeEEEEEEECCCEEEEeCCCcccHHH---HHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHCCCCEEEEcHHHHH
Confidence 33334443 234689999998521000 0111000 0126899999999999999999853 45789999999998
Q ss_pred HHHHhhccCCCceEEcCCCCEEEECCEEEEEEEc--CCCCCceEEEEEeeCCcEEEEECCCC
Q 012419 178 LVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEA--NHCPGAALIHFRLQDGQCYLHTGDFR 237 (464)
Q Consensus 178 ~l~~~~~~~~~~~~~v~~~~~~~i~~~~v~~~~a--gH~~gs~~~~i~~~~g~~ilytGD~~ 237 (464)
.+...++.....+..+..|+.+.+++.+++++++ ||++|++++++. + .+++|+||+.
T Consensus 110 ~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~~--~-~~~lf~GD~~ 168 (398)
T 1ycg_A 110 SLKAHYSHIDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYVP--E-EALLLPNDAF 168 (398)
T ss_dssp HHHHHTCSCCCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEET--T-TTEEEEETTT
T ss_pred HHHHHhCCCCcceEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEEEEEC--C-CcEEEecccc
Confidence 8877665443467889999999999999999986 599999998763 3 3699999994
No 31
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.31 E-value=4e-12 Score=121.87 Aligned_cols=97 Identities=19% Similarity=0.198 Sum_probs=71.8
Q ss_pred CCccEEEeCccchhhhcCccccCCCCcEEeCHHHHHHHHHhhc------cCCCceEEcCCCCEEEECCEEEEEEEcCCCC
Q 012419 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL------VNPSYIHPLELNTEHVIDGVKVTLLEANHCP 215 (464)
Q Consensus 142 ~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~------~~~~~~~~v~~~~~~~i~~~~v~~~~agH~~ 215 (464)
.+|++||+||.|.||++|++... +.+||+++.+.+.+..... .....+..+ .++...++++++...+ ||++
T Consensus 99 ~~I~~VilTH~H~DH~gg~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~p-GHt~ 175 (254)
T 3dha_A 99 DDLLYIISSHLHFDHAGGNGAFT-NTPIIVQRTEYEAALHREEYMKECILPHLNYKII-EGDYEVVPGVQLLYTP-GHSP 175 (254)
T ss_dssp GGCSEEECSCCSHHHHTTGGGCS-SSCEEEEHHHHHHHHHCTTSCGGGSCTTSCEEEE-CSSEEEETTEEEEECC-SSST
T ss_pred HHCCEEEcCCChhhcCCChHHCC-CCEEEECHHHHHHhhccccccccccCcccceEEe-cCCccccCCEEEEECC-CCCC
Confidence 45999999999999999999653 7899999999887654211 111223333 4666667886665444 9999
Q ss_pred CceEEEEEeeCCcEEEEECCCCCCcc
Q 012419 216 GAALIHFRLQDGQCYLHTGDFRASRL 241 (464)
Q Consensus 216 gs~~~~i~~~~g~~ilytGD~~~~~~ 241 (464)
|+++++++..++++++|+||+.+...
T Consensus 176 g~~~~~~~~~~~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 176 GHQSLFIETEQSGSVLLTIDASYTKE 201 (254)
T ss_dssp TCEEEEEEETTTEEEEEEETTCSSHH
T ss_pred CCEEEEEEeCCCCEEEEEecccchhh
Confidence 99999998644568999999987643
No 32
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.30 E-value=1.8e-12 Score=138.65 Aligned_cols=192 Identities=13% Similarity=0.156 Sum_probs=117.1
Q ss_pred cCCceeEEcCCCCCCCCC--------------------CceEecCCCcCCCCCccEEEeCccchhhhcCcccc---CCCC
Q 012419 111 HLKKIVDRSCPFYKKIPG--------------------TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHG 167 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~--------------------~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---~~~~ 167 (464)
.+...+|||||.....+. ...+++.+....+.+||+|||||.|.||++|++.+ ....
T Consensus 25 ~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHiggl~~l~~~~~~~ 104 (547)
T 2bib_A 25 SNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIGNVDELLSTYPVD 104 (547)
T ss_dssp ETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHTTHHHHHHHSCBS
T ss_pred eCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccCCHHHHHHhCCcc
Confidence 467789999998521110 01122222223457899999999999999999853 2233
Q ss_pred cEEeCHHHHHH----------------HHHhhccCCCceE--EcCCCCEEEECCEEEEEEEc---CC-----------CC
Q 012419 168 PIYCSPLTARL----------------VRMCLLVNPSYIH--PLELNTEHVIDGVKVTLLEA---NH-----------CP 215 (464)
Q Consensus 168 ~Iy~s~~t~~~----------------l~~~~~~~~~~~~--~v~~~~~~~i~~~~v~~~~a---gH-----------~~ 215 (464)
+||+++.+... +...+......+. .+..++.+.+++++|++++. .| ..
T Consensus 105 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g~~~i~~l~~~~~~h~~~~~~~~~~~n~ 184 (547)
T 2bib_A 105 RVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYENETDSSGELKKIWDDNS 184 (547)
T ss_dssp EEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEETTEEEEEESCSCCBCTTSCBCCBSSGGG
T ss_pred EEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecCCeeEEEecCccccCccccccccCCCCC
Confidence 58887543221 1111111111222 34678899999999999973 23 35
Q ss_pred CceEEEEEeeCCcEEEEECCCCCCcccc--ccccccCCCccEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHhCCC
Q 012419 216 GAALIHFRLQDGQCYLHTGDFRASRLMQ--SYPLLVNHRVNVLYLDTTYCNPKYKFP-SKEDVLNYVVRLTKNCLKKQPK 292 (464)
Q Consensus 216 gs~~~~i~~~~g~~ilytGD~~~~~~~~--~~~~l~~~~~DlLi~EsT~~~~~~~~p-~~~~~~~~l~~~i~~~l~~~~~ 292 (464)
+|++++++. ++.+++|+||+....... +... ..++|+|++- +|. ++.....+|++.+ .|+
T Consensus 185 ~S~vl~i~~-~~~~iLftGD~~~~~~~e~~l~~~--~~~~DvLkv~--------HHG~S~~s~s~~fl~~v------~P~ 247 (547)
T 2bib_A 185 NSLISVVKV-NGKKIYLGGDLDNVHGAEDKYGPL--IGKVDLMKFN--------HHHDTNKSNTKDFIKNL------SPS 247 (547)
T ss_dssp GCCEEEEEE-TTEEEEECTTCCSTTSHHHHHHHH--HCCCSEEECT--------TTTBCSSSSCHHHHHHH------CCS
T ss_pred CcEEEEEEE-CCEEEEecCCccchhhhhhhhccc--ccceeEEEec--------cccCcccCChHHHHHhc------CCc
Confidence 789999997 667999999998753211 1111 2479999752 222 2222334555544 365
Q ss_pred eEEEEecccccH-------HHHHHHHHHHcCCeEEEcc
Q 012419 293 TLVVVGAYSIGK-------ESVFLAISKALGVKIYANA 323 (464)
Q Consensus 293 ~~vli~~~s~Gr-------~qell~l~~~~~~~I~v~~ 323 (464)
.++|. .|+ .+++++.+++.+++++...
T Consensus 248 -~aiiS---~g~~n~~~hP~~evl~~l~~~g~~v~~T~ 281 (547)
T 2bib_A 248 -LIVQT---SDSLPWKNGVDSEYVNWLKERGIERINAA 281 (547)
T ss_dssp -EEEES---BSSCSBSSSBCHHHHHHHHTTTCEEEECB
T ss_pred -EEEEc---CCcccccCCCCHHHHHHHHhCCceEEEec
Confidence 34443 343 4788999999999988753
No 33
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.28 E-value=1.9e-11 Score=115.66 Aligned_cols=114 Identities=18% Similarity=0.121 Sum_probs=76.8
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccCCCCcEEeCHHHHHHHHHhhccCCCce
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLLVNPSYI 190 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~~~~~~~ 190 (464)
.++..+++|||... .+ ++. ...++|+|||||.|.||++ ++....+.+++
T Consensus 27 ~~~~~iLiD~g~~~--~~----~~~----~~~~id~VliTH~H~DH~~-~~~l~~~~~vi-------------------- 75 (220)
T 1vjn_A 27 MEGKTIVTDPFDES--VG----YPI----PNVTADVVTESHQHFDHNA-HHLVKGNFRVI-------------------- 75 (220)
T ss_dssp ETTEEEEESCCC-----------CC----CCCBCSEEECSSCC---CG-GGGCBSSCEEE--------------------
T ss_pred ECCEEEEEcCCCCc--CC----CCc----CCCCcCEEEECCCCCCCCC-chHhcCCCEEE--------------------
Confidence 46678999999753 11 111 2368999999999999998 66433233332
Q ss_pred EEcCCCCEEEECCEEEEEEEcCCCC------C-ceEEEEEeeCCcEEEEECCCCCCccccccccccCCCccEEEEeCC
Q 012419 191 HPLELNTEHVIDGVKVTLLEANHCP------G-AALIHFRLQDGQCYLHTGDFRASRLMQSYPLLVNHRVNVLYLDTT 261 (464)
Q Consensus 191 ~~v~~~~~~~i~~~~v~~~~agH~~------g-s~~~~i~~~~g~~ilytGD~~~~~~~~~~~~l~~~~~DlLi~EsT 261 (464)
..+..+++++++|+++++.|.+ | +++|+|+. +|++++|+||+...+....... ..++|++++|+.
T Consensus 76 ---~~~g~~~~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~-~g~~i~~~GDt~~~~~~~~~~~--~~~~Dvlil~~g 147 (220)
T 1vjn_A 76 ---DRPGAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEG-EGIKVCHLGDLGHVLTPAQVEE--IGEIDVLLVPVG 147 (220)
T ss_dssp ---CSSEEEEETTEEEEEEEEEEC-------CEEEEEEEEE-TTEEEEECTTCCSCCCHHHHHH--HCCCSEEEEECC
T ss_pred ---cCCCeEEECCEEEEEEeeecCCCCCccCCCcEEEEEEE-CCeEEEEeCCCCCcchHHHHHh--hCCCCEEEEcCC
Confidence 1223678899999999999965 2 58999996 6789999999998764221111 257999999985
No 34
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.27 E-value=6.7e-12 Score=122.99 Aligned_cols=125 Identities=17% Similarity=0.190 Sum_probs=88.4
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcC--CCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHhhc--
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLL-- 184 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~--~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~-- 184 (464)
.++..+++|||....... ..+.+... ...+|++||+||.|.||++|++... ++++||+++.+...+.....
T Consensus 65 ~~~~~iLiD~G~~~~~~~---~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~l~~~~~~~ 141 (303)
T 4ax1_B 65 SDAGHILVDAATPQAGPQ---ILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKATGAPVYARAPAIDTLKRGLPDR 141 (303)
T ss_dssp CTTCEEEECCBSTTCHHH---HHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHHCCCEEEEHHHHHHHHHTSCCT
T ss_pred eCCcEEEEECCCcccHHH---HHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhcCCEEEEcHHHHHHHhccccCc
Confidence 467799999997321111 11111111 1146999999999999999998632 47899999999988765421
Q ss_pred -----------cCCCceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCc--EEEEECCCCC
Q 012419 185 -----------VNPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQ--CYLHTGDFRA 238 (464)
Q Consensus 185 -----------~~~~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~--~ilytGD~~~ 238 (464)
........+..++.+.+++.+|+++++ ||++|+++|+++..++. ..+++||+-+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~~~~~~~l~gD~l~ 209 (303)
T 4ax1_B 142 TDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSCEGDDCRQMVYADSLT 209 (303)
T ss_dssp TSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCC
T ss_pred cccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCccceEEEEEecCCCceeEEEEeCCcc
Confidence 012346788999999999999999986 89999999999853221 2355599865
No 35
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.27 E-value=1.7e-12 Score=121.57 Aligned_cols=121 Identities=17% Similarity=0.105 Sum_probs=89.4
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc-CCCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR-WSHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~-~~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
.++..+++|||...... ...++.+......+|++||+||.|.||++|++.. ..+++||+++.+.+.+..... ...
T Consensus 38 ~~~~~iLiD~G~~~~~~--~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~--~~~ 113 (219)
T 3l6n_A 38 TKKGVVLFDVPWEKVQY--QSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNNKGIKTYATAKTNEFLKKDGK--ATS 113 (219)
T ss_dssp ETTEEEEESCCSSGGGH--HHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHHTTCEEEECHHHHHHHHHTTC--CCC
T ss_pred eCCEEEEEeCCCChHHH--HHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHhCCCEEEEcHHHHHHHHhcCC--CCC
Confidence 56789999999743110 0111111110115799999999999999999853 247899999999887765321 234
Q ss_pred eEEcCCCCEEEECCEEEEEEE--cCCCCCceEEEEEeeCCcEEEEECCCCC
Q 012419 190 IHPLELNTEHVIDGVKVTLLE--ANHCPGAALIHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 190 ~~~v~~~~~~~i~~~~v~~~~--agH~~gs~~~~i~~~~g~~ilytGD~~~ 238 (464)
...+..++.+.+++++|++++ .||++|+++++++ + .+++|+||+-+
T Consensus 114 ~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~-~~~lf~GD~~~ 161 (219)
T 3l6n_A 114 TEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFP--K-YNVLDGGCLVK 161 (219)
T ss_dssp SEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEET--T-TTEEEEETTSC
T ss_pred cEecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEEC--C-CCEEEECCeee
Confidence 577899999999999999997 4999999999886 3 36999999875
No 36
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.24 E-value=1e-11 Score=120.21 Aligned_cols=125 Identities=14% Similarity=0.094 Sum_probs=86.4
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCC--CCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHhh---
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGS--IKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCL--- 183 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~--i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~--- 183 (464)
.++..+++|||...... ...+.+.... ..+|++||+||.|.||++|++... .+++||+++.+...+....
T Consensus 45 ~~~~~iLID~G~~~~~~---~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~l~~~~~~~ 121 (269)
T 1sml_A 45 TPDGAVLLDGGMPQMAS---HLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDD 121 (269)
T ss_dssp ETTEEEEECCBSGGGHH---HHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHSSCEEEECHHHHHHHHTTTCSB
T ss_pred eCCceEEEECCCCccHH---HHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhcCCeEEECHHHHHHHhcCCccc
Confidence 45678999999742100 0111111111 147999999999999999998532 4689999999988765421
Q ss_pred ---cc----CC-CceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEee-CCc-EEEEECCCCC
Q 012419 184 ---LV----NP-SYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQ-DGQ-CYLHTGDFRA 238 (464)
Q Consensus 184 ---~~----~~-~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~-~g~-~ilytGD~~~ 238 (464)
+. .+ .....+..++.+.+++++|+++++ ||++|+++|+++.. +++ +.+++||+-+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~g~~~~~~~~~~~~~~~~l~~gD~l~ 187 (269)
T 1sml_A 122 LHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAYADSLS 187 (269)
T ss_dssp TTTBTSSCCCCCCCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCC
T ss_pred cccccccCCCCCCCCeEeCCCCEEEECCEEEEEEECCCCCcccEEEEEecccCCceeEEEEecccc
Confidence 10 11 124568889999999999999998 79999999998752 342 3555599865
No 37
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.24 E-value=6.6e-12 Score=122.50 Aligned_cols=126 Identities=13% Similarity=0.113 Sum_probs=81.0
Q ss_pred cCCceeEEcCCCCCCC-----------CCCceEecCCCcC--CCCCccEEEeCccchhhhcCccccC-----CCCcEEeC
Q 012419 111 HLKKIVDRSCPFYKKI-----------PGTPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGKRW-----SHGPIYCS 172 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~-----------~~~~~~id~f~~~--~i~~id~I~iTH~H~DHiggL~~~~-----~~~~Iy~s 172 (464)
.++..+++|||..... ......++.+... ...+||+||+||.|.||+||++.+. ++++||++
T Consensus 55 ~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~~fp~a~i~~~ 134 (280)
T 3esh_A 55 TAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQ 134 (280)
T ss_dssp CSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCCSSTTCEEEEE
T ss_pred ECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccccCCCCCEEEEC
Confidence 5678999999985421 0001111111111 2258999999999999999998532 47899999
Q ss_pred HHHHHHHHHhhc-----cC-------CCceEEcCCCCEEEE-CCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCC
Q 012419 173 PLTARLVRMCLL-----VN-------PSYIHPLELNTEHVI-DGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 173 ~~t~~~l~~~~~-----~~-------~~~~~~v~~~~~~~i-~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~ 238 (464)
+.+...+..... .. ...+..+..+ ..+ .+ |+++++ ||++|+++|+++. ++.+++||||+-+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~g--i~~~~~pGHt~g~~~~~i~~-~~~~vlftGD~~~ 209 (280)
T 3esh_A 135 QDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKH--FEPVPG--IKMQHSGGHSFGHTIITIES-QGDKAVHMGDIFP 209 (280)
T ss_dssp HHHHHHHHSCCTTGGGTSCGGGCCGGGGGEEEESSE--ECSSTT--EEEEECCSSSTTCEEEEEEE-TTEEEEECGGGSC
T ss_pred HHHHHHhhCcccccccchhhhhhhhhhheEEEeCCC--CeEcCC--EEEEEcCCCCcccEEEEEEE-CCcEEEEEEccCC
Confidence 998876642110 00 1123333322 233 34 445665 9999999999996 5679999999987
Q ss_pred Ccc
Q 012419 239 SRL 241 (464)
Q Consensus 239 ~~~ 241 (464)
...
T Consensus 210 ~~~ 212 (280)
T 3esh_A 210 TTA 212 (280)
T ss_dssp SGG
T ss_pred chh
Confidence 643
No 38
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.23 E-value=1e-11 Score=119.26 Aligned_cols=114 Identities=19% Similarity=0.209 Sum_probs=83.4
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHH--------
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRM-------- 181 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~-------- 181 (464)
++..+++|||.......+ .. ..+|++||+||.|.||++|++... .+.+||+++.+.+.+..
T Consensus 28 ~~~~iLiD~G~~~~~~~l-------~~--~~~i~~vi~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~l~~~~~~~~~~ 98 (261)
T 3adr_A 28 EKLTVMIDAGVSNSIADF-------SF--LDKLDYIVLTHLHIDHIGLLPELLQVYKAKVLVKSGFKKYLTSEDGLKKLN 98 (261)
T ss_dssp SSCEEEECCCCTTCCCCC-------TT--CSCCCEEECSCCSGGGTTTHHHHHHHSCCEEEEETTCTHHHHSHHHHHHHH
T ss_pred CCcEEEEeCCCCCChhhc-------CC--CCCCcEEEECCCCccccCCHHHHHHHhCCeEEECHHHHHHhcCchhHHHHH
Confidence 367899999986532221 11 368999999999999999998532 37899998766543321
Q ss_pred ------------hhcc-----CCCceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 182 ------------CLLV-----NPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 182 ------------~~~~-----~~~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
.++. ....+..++.++.+.+++++|+++++ ||++|+++|.+ + +++|+||+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~~~~~~~~---~--~~lf~GD~~~~ 169 (261)
T 3adr_A 99 ESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLV---D--DFLFTGDSAGA 169 (261)
T ss_dssp HHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCTTCEEEEE---T--TEEEEETSSCE
T ss_pred HHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCCCCCccEEEEE---C--CEEEEcCcccc
Confidence 1111 11246778899999999999999997 79999999853 2 59999999653
No 39
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.23 E-value=2.3e-12 Score=119.95 Aligned_cols=119 Identities=14% Similarity=0.055 Sum_probs=83.9
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHh-------
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMC------- 182 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~------- 182 (464)
++..+++|||.... ...+.+.... .+|++||+||.|.||++|++... .+++||+++.+.+.+...
T Consensus 23 ~~~~iLiD~G~~~~-----~l~~~l~~~g-~~i~~ii~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 96 (210)
T 2xf4_A 23 TRLAALVDPGGDAE-----KIKQEVDASG-VTLMQILLTHGHLDHVGAASELAQHYGVPVIGPEKEDEFWLQGLPAQSRM 96 (210)
T ss_dssp TCEEEEECCCSCHH-----HHHHHHHHHT-CEEEEEECSCSCHHHHTTHHHHHHHHTCCEECCCGGGHHHHHTHHHHHHH
T ss_pred CCcEEEEcCCCCHH-----HHHHHHHHcC-CceeEEEECCCChhhhcCHHHHHHHcCCcEEEecchHHHHhccchhhhhh
Confidence 46789999995311 1111111111 25899999999999999998532 367999998876655432
Q ss_pred hccC----CCceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 183 LLVN----PSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 183 ~~~~----~~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
++.. ......++.++.+.+++.+|+++++ ||++|+++++++ + .+++|+||+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~--~-~~~lf~GD~~~~ 155 (210)
T 2xf4_A 97 FGLDECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDE--Q-SQLLISGDVIFK 155 (210)
T ss_dssp TTCCCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEET--T-TTEEEEETSEET
T ss_pred cCCcccCCCCCceEECCCCEEEECCeEEEEEECCCCCCCcEEEEeC--C-CCEEEECCEecc
Confidence 2221 0123557889999999999999987 899999999875 3 479999999654
No 40
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.23 E-value=5.8e-12 Score=129.65 Aligned_cols=121 Identities=9% Similarity=0.060 Sum_probs=88.1
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCc-CCCCCccEEEeCccchhhhcCccc---cCCCCcEEeCHHHHHHHHHhhccCC
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRY-GSIKGCSAYFLTHFHYDHYGGLGK---RWSHGPIYCSPLTARLVRMCLLVNP 187 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~-~~i~~id~I~iTH~H~DHiggL~~---~~~~~~Iy~s~~t~~~l~~~~~~~~ 187 (464)
++..+++|||....... .++.+.. ....+|++||+||.|.||+||++. ..++.+||+++.+.+.+...++...
T Consensus 48 ~~~~iLID~G~~~~~~~---~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~ 124 (414)
T 2q9u_A 48 DECPTVIDSVKYPFAEE---WLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLKILYGMEK 124 (414)
T ss_dssp SSSCEEECCCCGGGHHH---HHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGSTTCEEEECHHHHHHHHHHHCCTT
T ss_pred CCCEEEEeCCCcccHHH---HHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHHCCCCEEEECHHHHHHHHHHhCCCC
Confidence 35689999998421100 0111000 012689999999999999999985 3357899999999988776655433
Q ss_pred CceEEcCCCCEEEECCEEEEEEEc--CCCCCceEEEEEeeCCcEEEEECCCCC
Q 012419 188 SYIHPLELNTEHVIDGVKVTLLEA--NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 188 ~~~~~v~~~~~~~i~~~~v~~~~a--gH~~gs~~~~i~~~~g~~ilytGD~~~ 238 (464)
.....+..++.+.+++.+++++++ ||++|++++++. + .+++|+||...
T Consensus 125 ~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~~~~~--~-~~~lf~GD~~~ 174 (414)
T 2q9u_A 125 ATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYCP--E-DKILFSNDGFG 174 (414)
T ss_dssp CCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEET--T-TTEEEEETTTC
T ss_pred CeeEEeCCCCEEEECCeEEEEEeCCCCCCCCceEEEEC--C-CeEEEEccccc
Confidence 457788999999999988888887 699999887654 3 36999999643
No 41
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.22 E-value=7e-12 Score=123.69 Aligned_cols=127 Identities=12% Similarity=0.059 Sum_probs=88.4
Q ss_pred CCceeEEcCCCCCCC-CC------CceEecCCCcCCCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHh
Q 012419 112 LKKIVDRSCPFYKKI-PG------TPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMC 182 (464)
Q Consensus 112 ~~~~~lidcG~~~~~-~~------~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~ 182 (464)
++..++||+|..... .+ ....++...... .+|++||+||.|.||++|+..+. .+++||+++.+.......
T Consensus 27 ~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~a~i~~~~~~~~~~~~~ 105 (298)
T 4efz_A 27 SGECALIDSVLDYDPKSGRTRTASADQLIARVAALG-ARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVF 105 (298)
T ss_dssp TCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHT-CEEEEEECSSCCSSSBCCHHHHHHHHCCEEEEETTHHHHHHHH
T ss_pred CCeEEEEcCCCCccccccccCcccHHHHHHHHHHCC-CcceEEEECCCchhhhhhHHHHHHHhCCcEEEChhHHHHHHHH
Confidence 567899999973110 00 001111111112 35899999999999999998532 368999998877654422
Q ss_pred ---hccCC-------CceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcE------EEEECCCCCCc
Q 012419 183 ---LLVNP-------SYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQC------YLHTGDFRASR 240 (464)
Q Consensus 183 ---~~~~~-------~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~------ilytGD~~~~~ 240 (464)
++... .....+..|+.+.+++++|+++++ ||++|+++|++.. ++++ ++||||+-+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~g~~~~~~~~-~~~~~~~~~~~lftGD~l~~~ 179 (298)
T 4efz_A 106 GKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTE-AHAAHDARDAAAFVGDTLFMP 179 (298)
T ss_dssp HHHTTCCTTSCSSSTTSSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEE-TTCCGGGCBCEEECCSSBCCT
T ss_pred HHhcCCcccccccccCCCEEeCCCCEEEECCEEEEEEECCCCCcccEEEEECC-CcccccCCceEEEEcCccccC
Confidence 22211 123678899999999999999998 8999999999985 4444 99999997643
No 42
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.21 E-value=2.5e-11 Score=125.17 Aligned_cols=144 Identities=15% Similarity=0.060 Sum_probs=105.3
Q ss_pred eecccCCCccccccCCCcccccccccCCCcccc--cCCceeEEcCCCCCCCC----CCceEecCCCcCCCCCccEEEeCc
Q 012419 78 MWGLKSNSESEANCLFSPPMKKLKASNGKSTAT--HLKKIVDRSCPFYKKIP----GTPFTVDAFRYGSIKGCSAYFLTH 151 (464)
Q Consensus 78 ~w~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~--~~~~~~lidcG~~~~~~----~~~~~id~f~~~~i~~id~I~iTH 151 (464)
++|+|.+.+......+ .-.+-.|++-|++. .++..+|||+|...... .+...+++ .+||+|++||
T Consensus 27 iy~vg~~d~~~~~Fe~---~~~~~~GtsyNsYLI~~~~~~vLIDtg~~~~~~~~l~~l~~~i~~------~~IdyIi~TH 97 (410)
T 4dik_A 27 IYVLRIDDDRIRYFEA---VWEIPEGISYNAYLVKLNGANVLIDGWKGNYAKEFIDALSKIVDP------KEITHIIVNH 97 (410)
T ss_dssp EEEEEEEECSCCEETT---TEECTTCEEEEEEEEECSSCEEEECCCCGGGHHHHHHHHTTTSCG------GGCCEEECSC
T ss_pred EEEEeeecCCCcceee---eeeCCCceEEEEEEEEECCeEEEEeCCCcchHHHHHHHHHHhcCc------ccCCEEEeCc
Confidence 8999988766543222 11223455455554 46678999998643111 11112332 6899999999
Q ss_pred cchhhhcCccc----cCCCCcEEeCHHHHHHHHHhhccCCCceEEcCCCCEEEECCEEEEEEEc-C-CCCCceEEEEEee
Q 012419 152 FHYDHYGGLGK----RWSHGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEA-N-HCPGAALIHFRLQ 225 (464)
Q Consensus 152 ~H~DHiggL~~----~~~~~~Iy~s~~t~~~l~~~~~~~~~~~~~v~~~~~~~i~~~~v~~~~a-g-H~~gs~~~~i~~~ 225 (464)
.|.||+|+++. ..++.+||+++.+..+++..+.. ..+..++.|+.+.+++.+++++++ + |.||+++++.
T Consensus 98 ~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~~~~~~--~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p~~~~~y~--- 172 (410)
T 4dik_A 98 TEPDASGSLPATLKTIGHDVEIIASNFGKRLLEGFYGI--KDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--- 172 (410)
T ss_dssp CCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHHHHHCC--CCEEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE---
T ss_pred CCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHHhhcCc--cceeEecCCCEEeecceEEEEecCCCCCCCCCeeEEe---
Confidence 99999999985 24678999999999988877653 457889999999999999999998 6 8999988763
Q ss_pred CCcEEEEECCCC
Q 012419 226 DGQCYLHTGDFR 237 (464)
Q Consensus 226 ~g~~ilytGD~~ 237 (464)
+ +++||||..
T Consensus 173 ~--~iLFsgD~f 182 (410)
T 4dik_A 173 D--GILFSCDVG 182 (410)
T ss_dssp T--TEEEEETTT
T ss_pred C--CceEccccc
Confidence 3 389999984
No 43
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.20 E-value=2.9e-12 Score=120.86 Aligned_cols=127 Identities=14% Similarity=0.040 Sum_probs=80.6
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccCCCCcEEeCHHHHHH-HHH-------h
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARL-VRM-------C 182 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~-l~~-------~ 182 (464)
.++..+++|||...........+.... ....+|++||+||.|.||++|++... +.+||+++..... +.. .
T Consensus 42 ~~~~~iLID~G~~~~~~~l~~~l~~~g-~~~~~i~~ViiTH~H~DH~gg~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~ 119 (221)
T 1ztc_A 42 HKDRRIIIDPGNLSSMDELEEKFSELG-ISPDDITDVLFTHVHLDHIFNSVLFE-NATFYVHEVYKTKNYLSFGTIVGRI 119 (221)
T ss_dssp ETTEEEEECCCCGGGHHHHHHHHHHHT-CCGGGCCEEECSCCCHHHHGGGGGCT-TCEEEEEGGGGGSCGGGGCHHHHHH
T ss_pred eCCeEEEEECCCCcchHHHHHHHHHcC-CCHHHCcEEEEcCCccccCCchhhCC-CCEEEEeHHHhhhhhhhhccchhhh
Confidence 567889999997421000000011000 01257999999999999999998654 7899998762110 000 0
Q ss_pred ---hccCCCceEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCCc
Q 012419 183 ---LLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (464)
Q Consensus 183 ---~~~~~~~~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~~ 240 (464)
.......+..++.++.+..+++++...+ ||++|+++|+++..++++++|+||+.+..
T Consensus 120 ~~~~~~~~~~~~~~~~g~~l~~~~~~v~~~p-GHt~g~~~~~~~~~~~~~vlftGD~~~~~ 179 (221)
T 1ztc_A 120 YSKVISSWKNVVLLKGEESLFDEKVKVFHTP-WHAREHLSFLLDTENAGRVLITGDITPNR 179 (221)
T ss_dssp HHHHHHTCCSEEEECSCCEETTTTEEEEECC-SSSTTCEEEEEEETTTEEEEECGGGSCSH
T ss_pred hhhccccccceEEeCCCCEEECCeEEEEEcC-CCCcccEEEEEEcCCCCeEEEEeCccccc
Confidence 0011245677888877642356666655 99999999999963325899999998643
No 44
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.19 E-value=9.2e-12 Score=120.68 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=69.1
Q ss_pred CCccEEEeCccchhhhcCccccCCCCcEEeCHHHHHHHHHhhc------------------------------cCCCceE
Q 012419 142 KGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTARLVRMCLL------------------------------VNPSYIH 191 (464)
Q Consensus 142 ~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~~~l~~~~~------------------------------~~~~~~~ 191 (464)
.+|++||+||.|.||+||++.. .+.+||+++.+.+.+..... .....+.
T Consensus 87 ~~i~~VilTH~H~DH~gg~~~~-~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (274)
T 3aj3_A 87 RDIDVVVNSHFHFDHCGGNKYF-PHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTFE 165 (274)
T ss_dssp GGCCEEECSCCSGGGTTTGGGC-TTSEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCEE
T ss_pred HHCCEEEecCcCcccCCchhhC-CCCEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCce
Confidence 5799999999999999999876 67899999888776542110 0012344
Q ss_pred EcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCCCc
Q 012419 192 PLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRASR 240 (464)
Q Consensus 192 ~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~~~ 240 (464)
.++ +.+.+++ +++++.+ ||++|+++++++.+++.+++|+||+.+..
T Consensus 166 ~~~--~~~~l~g-~~~v~~~pGHt~g~~~~~~~~~~~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 166 GID--GDVDLAR-GVKLISTPGHSIGHYSLLVEFPRRKPILFTIDAAYTQ 212 (274)
T ss_dssp EEC--SSEEEET-TEEEEECTTSSTTCEEEEECCSSSCCEEEEETTCSSH
T ss_pred EcC--CccccCC-EEEEEECCCCCceeeEEEEECCCCCEEEEEechhhhH
Confidence 454 3466777 4555555 89999999999864245899999987754
No 45
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.17 E-value=1.8e-11 Score=122.63 Aligned_cols=126 Identities=19% Similarity=0.177 Sum_probs=82.2
Q ss_pred cCCceeEEcCCCCCCCCC-CceEecCCCcC--CCCCccEEEeCccchhhhcCccc----cCCCCcEEeCHHHHHHHHHhh
Q 012419 111 HLKKIVDRSCPFYKKIPG-TPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGK----RWSHGPIYCSPLTARLVRMCL 183 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~-~~~~id~f~~~--~i~~id~I~iTH~H~DHiggL~~----~~~~~~Iy~s~~t~~~l~~~~ 183 (464)
+++..+++|||....... .....+.+... ...+||+||+||.|.||+||+.. .+.+.+||+++.+.+.+....
T Consensus 104 ~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp~a~v~~~~~~~~~~~~~~ 183 (331)
T 1p9e_A 104 TGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQKEADFWLSQT 183 (331)
T ss_dssp CSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBHHHHHHHSCHH
T ss_pred ECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCCCCEEEECHHHHHHHhCch
Confidence 567889999998632100 00011111101 12579999999999999999983 345789999998876542110
Q ss_pred ---------------------ccC--CCceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 184 ---------------------LVN--PSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 184 ---------------------~~~--~~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
... ..+++.++.++.+.. + |+++++ ||++|+++|+++. ++.+++|+||+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~-g--i~vi~tpGHtpG~~~~~i~~-~~~~vlf~GD~~~~ 259 (331)
T 1p9e_A 184 NLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLVP-G--IKALASHGHTPGHTTYVVES-QGQKLALLGDLILV 259 (331)
T ss_dssp HHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECST-T--EEEEECTTSSTTCEEEEEEE-TTEEEEECTTSCCC
T ss_pred hhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEcc-c--EEEEEcCCCChhCEEEEEEE-CCcEEEEEECccCc
Confidence 000 123445666655443 4 555555 9999999999986 56799999999876
Q ss_pred c
Q 012419 240 R 240 (464)
Q Consensus 240 ~ 240 (464)
.
T Consensus 260 ~ 260 (331)
T 1p9e_A 260 A 260 (331)
T ss_dssp H
T ss_pred c
Confidence 5
No 46
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.14 E-value=9e-12 Score=119.70 Aligned_cols=112 Identities=15% Similarity=-0.034 Sum_probs=82.9
Q ss_pred CceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 113 ~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
+..++||+|.... ...++.+.... .+|++||+||.|.||++|+..+ ...++||+++.+.. ..
T Consensus 28 ~~~ilID~g~~~~----~~~~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~~----------~~ 92 (245)
T 2gcu_A 28 KPALLIDPVDKTV----DRDLKLIDELG-LKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGS----------KA 92 (245)
T ss_dssp CEEEEESCBGGGH----HHHHHHHHHHT-CEEEEEECSSCCSSSCBSHHHHHHHSTTCEEEEEGGGCC----------CC
T ss_pred CcEEEEeCCCchH----HHHHHHHHHCC-CeeeEEEeCCCChhhhhhHHHHHHhCCCCeEEecccccc----------cC
Confidence 5789999997420 01111111112 2589999999999999999853 56789999976531 12
Q ss_pred eEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeC---CcEEEEECCCCCC
Q 012419 190 IHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQD---GQCYLHTGDFRAS 239 (464)
Q Consensus 190 ~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~---g~~ilytGD~~~~ 239 (464)
...+..|+.+.+++.+|+++.+ ||++|+++|+++..+ +.+++||||+-+.
T Consensus 93 ~~~~~~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~~~~~~~~lftGD~~~~ 146 (245)
T 2gcu_A 93 DLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLI 146 (245)
T ss_dssp SEEECTTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETTSBT
T ss_pred CEEcCCCCEEEECCEEEEEEECCCCCCCCEEEEECCccccccccEEEECCcccc
Confidence 3577889999999999999998 999999999997521 2379999999764
No 47
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.14 E-value=1.6e-11 Score=115.53 Aligned_cols=121 Identities=17% Similarity=0.130 Sum_probs=87.0
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcC-CCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhhccCCC
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPS 188 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~-~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (464)
.++..+++|||....... ..++.+... . .+|++||+||.|.||++|++... .+++||+++.+.+.+...... .
T Consensus 34 ~~~~~iLiD~G~~~~~~~--~~~~~l~~~~g-~~i~~vi~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~~~~--~ 108 (223)
T 1m2x_A 34 TDKGVVVIDCPWGEDKFK--SFTDEIYKKHG-KKVIMNIATHSHDDRAGGLEYFGKIGAKTYSTKMTDSILAKENKP--R 108 (223)
T ss_dssp ETTEEEEESCCSSGGGHH--HHHHHHHHHHC-CCEEEEECSSSSTTTTTTHHHHHHTTCEEEEEHHHHHHHHHTTCC--C
T ss_pred eCCEEEEEeCCCChhHHH--HHHHHHHHHhC-CCeEEEEeccCCccccCchhhHhhCCCeEEEcHHHHHHHHhcCcc--C
Confidence 467789999997421000 011111111 1 47999999999999999998532 578999999998877653221 1
Q ss_pred ceEEcCCCCEEEECCEEEEEEE--cCCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 189 YIHPLELNTEHVIDGVKVTLLE--ANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 189 ~~~~v~~~~~~~i~~~~v~~~~--agH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
....+..++.+.+++.+++++. .||++|+++++++ + .+++|+||+-..
T Consensus 109 ~~~~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~~--~-~~~lf~GD~~~~ 158 (223)
T 1m2x_A 109 AQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFP--K-EKVLVGGCIIKS 158 (223)
T ss_dssp CSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEET--T-TTEEEEETTSCC
T ss_pred CceecCCCceEEECCEEEEEEecCCCCCCCCEEEEEC--C-CCEEEEeccccc
Confidence 2366788999999999999994 5999999999875 3 369999997543
No 48
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.12 E-value=1.2e-11 Score=115.19 Aligned_cols=116 Identities=21% Similarity=0.180 Sum_probs=78.1
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHh------
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMC------ 182 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~------ 182 (464)
.++..+++|||.... ...+.+.... .+|++||+||.|.||++|++... ++++||+++.+.+.+...
T Consensus 20 ~~~~~iliD~G~~~~-----~l~~~l~~~g-~~i~~vilTH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~ 93 (207)
T 2zwr_A 20 TGEGPVLIDPGDEPE-----KLLALFQTTG-LIPLAILLTHAHFDHVGAVAPLVEALDLPVYLHPLDLPLYEGADLAARA 93 (207)
T ss_dssp ETTEEEEECCCSCHH-----HHHHHHHHHT-CCCSCEECSCCCGGGTTTHHHHHHHHCCCEEECGGGHHHHHTHHHHHHH
T ss_pred eCCcEEEEeCCCCHH-----HHHHHHHHcC-CcccEEEECCCChHHHccHHHHHHHhCCcEEECHHHHHHHhCchhhhhh
Confidence 467789999996321 0111111111 35899999999999999998532 268999999998776532
Q ss_pred hccCCC----ceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 183 LLVNPS----YIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 183 ~~~~~~----~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
++.... ....+..++.+. .++++++ ||++|+++|+++ + .+++|+||+.+.
T Consensus 94 ~g~~~~~~~~~~~~~~~g~~i~----~~~~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~~ 148 (207)
T 2zwr_A 94 WGLAIPKPPLPVRPLEEGMRLF----GFQVLHLPGHSPGHVAFYDP--E-GAQVFSGDLLFR 148 (207)
T ss_dssp TTCCCCCCCSCCEECCTTCEET----TEEEEECCSSSTTCEEEEET--T-TTEEEEETSEET
T ss_pred cCCCCCcCCCCceEeCCCCEEE----EEEEEeCCCCCCCcEEEEEC--C-CCEEEEecccCC
Confidence 122111 245667777654 4555555 899999999985 3 469999999654
No 49
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.10 E-value=1.7e-11 Score=120.81 Aligned_cols=123 Identities=14% Similarity=0.059 Sum_probs=84.7
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHHHHHHh------
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMC------ 182 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~------ 182 (464)
++..+++|||...........+.... ....+|++||+||.|.||+||++.. .++++||+++.+.+.+...
T Consensus 33 ~~~~iLID~G~~~~~~~~~~~l~~~~-~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~a~v~~~~~~~~~~~~~~~~~~~ 111 (303)
T 2vw8_A 33 EASWALVEGGISRDAELVWADLCRWV-ADPSQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKSESAVRVV 111 (303)
T ss_dssp TTEEEEECCCCGGGHHHHHHHHHHHC-SCGGGEEEEECCCCSTTTTTTHHHHGGGCTTCEEEEEHHHHHHTTCHHHHHHH
T ss_pred CCceEEEECCCCCcHHHHHHHHHHHh-cCcccceEEEeccCCccccCCHHHHHHhCCCCeEEECHHHHHHHhccchhhHH
Confidence 45689999998431000000011100 0126899999999999999999853 3578999999887643210
Q ss_pred --h--------cc-------CCCceEEcCCCCEEEECC-EEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCC
Q 012419 183 --L--------LV-------NPSYIHPLELNTEHVIDG-VKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 183 --~--------~~-------~~~~~~~v~~~~~~~i~~-~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~ 238 (464)
+ +. .......+..|+.+.+++ .+++++++ ||++|+++|+++ + .+++|+||+-.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~~~~~~~--~-~~~lf~GD~~~ 183 (303)
T 2vw8_A 112 ERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDV--R-RRRLFCGDALG 183 (303)
T ss_dssp HHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEET--T-TTEEEEETTTC
T ss_pred HHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEEEEEECCCCCcccEEEEEC--C-CCEEEEcCccC
Confidence 0 00 012346788899999987 99999988 999999999886 3 36999999953
No 50
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.10 E-value=1.3e-11 Score=129.57 Aligned_cols=121 Identities=14% Similarity=0.036 Sum_probs=86.7
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc--CCCCcEEeCHHHHHHHHHhhccCCC
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR--WSHGPIYCSPLTARLVRMCLLVNPS 188 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~--~~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (464)
.++..++||+|.... ..++...... .+|++||+||.|.||++|+..+ .++++||+++.+...+...+. ...
T Consensus 25 ~~~~~ilID~g~~~~-----~~~~~l~~~~-~~i~~Il~TH~H~DH~gg~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~ 97 (474)
T 3tp9_A 25 ETGEACVIDPARDVE-----PYLLTAKREG-LRIVAALETHIHADFVSGAREMADRAGAAICVSDEGPPEWKSEYV-KAY 97 (474)
T ss_dssp TTCEEEEESCCSCCH-----HHHHHHHHHT-CEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEECCSCGGGCCGGG-GGS
T ss_pred CCCEEEEEcCCCChH-----HHHHHHHHcC-CeeEEEEcCcCchhhhCCHHHHHHHHCCcEEEcCcchhhhccccc-ccc
Confidence 357789999995321 1112111112 3689999999999999999863 247899998776543321111 112
Q ss_pred ceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCc-----EEEEECCCCCC
Q 012419 189 YIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQ-----CYLHTGDFRAS 239 (464)
Q Consensus 189 ~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~-----~ilytGD~~~~ 239 (464)
....+..|+.+.+++++|+++++ ||++|+++|++.. .+. +++||||+-+.
T Consensus 98 ~~~~~~~g~~~~~g~~~i~~i~tPGHt~g~~~~~~~~-~~~~~~~~~~lftGD~lf~ 153 (474)
T 3tp9_A 98 PHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYD-GKTSPDVPMALFSGDFVFV 153 (474)
T ss_dssp SEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEEE-TTTEEEEEEEEEEETSEET
T ss_pred cceECCCCCEEEECCEEEEEEECCCCCCCCEEEEEec-CCCCCCCceEEEeCCcccc
Confidence 34788999999999999999998 8999999999985 333 79999999743
No 51
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.10 E-value=5.1e-11 Score=118.55 Aligned_cols=89 Identities=22% Similarity=0.286 Sum_probs=71.5
Q ss_pred CCccEEEeCccchhhhcCccccC--C-------CCcEEeCHHHHHHHHHhhccCCCceEEcCCCCEEEECCEEEEEEEc-
Q 012419 142 KGCSAYFLTHFHYDHYGGLGKRW--S-------HGPIYCSPLTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEA- 211 (464)
Q Consensus 142 ~~id~I~iTH~H~DHiggL~~~~--~-------~~~Iy~s~~t~~~l~~~~~~~~~~~~~v~~~~~~~i~~~~v~~~~a- 211 (464)
.+|++||+||.|.||++|+..+. . ..+||+++... . +.....+..|+.+.+++.+|+++++
T Consensus 83 ~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~v~~~~~~~--------~-~~~~~~l~~g~~l~lg~~~l~vi~tP 153 (311)
T 2p18_A 83 YTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVVVVGGANDS--------I-PAVTKPVREGDRVQVGDLSVEVIDAP 153 (311)
T ss_dssp CEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCEEEEEGGGT--------C-TTCSEEECTTCEEEETTEEEEEEECC
T ss_pred CCccEEEeCCCCccccCCHHHHHHhhhhcccCCCCEEEEechhc--------C-CCCceEeCCCCEEEECCeEEEEEECC
Confidence 47899999999999999998521 1 57999987642 1 1235678899999999999999998
Q ss_pred CCCCCceEEEEEeeC--Cc-EEEEECCCCCC
Q 012419 212 NHCPGAALIHFRLQD--GQ-CYLHTGDFRAS 239 (464)
Q Consensus 212 gH~~gs~~~~i~~~~--g~-~ilytGD~~~~ 239 (464)
||++|+++|+++.++ +. +++|+||+.+.
T Consensus 154 GHT~g~i~~~~~~~~~~~~~~~lftGD~l~~ 184 (311)
T 2p18_A 154 CHTRGHVLYKVQHPQHPNDGVALFTGDTMFI 184 (311)
T ss_dssp SSSTTCEEEEEECTTCGGGCEEEEEETTEET
T ss_pred CCCcccEEEEEecCCcCCcCCEEEEcCcccc
Confidence 999999999997532 15 89999999654
No 52
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.09 E-value=4.7e-11 Score=118.14 Aligned_cols=125 Identities=16% Similarity=0.108 Sum_probs=85.7
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcC--CCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhh----
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG--SIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCL---- 183 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~--~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~---- 183 (464)
.++..+++|||...... .......+... ...+|++||+||.|.||+||+.... .+++||+++.+...+....
T Consensus 29 ~~~~~ilID~G~~~~~~-~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~ 107 (317)
T 2zo4_A 29 GAGEVALVDTALGTRAA-RGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGLGARVFLHEEEFARGHRFWREPE 107 (317)
T ss_dssp ETTEEEEECCCCSSHHH-HHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHTTCEEEEEGGGTTTHHHHHHCTT
T ss_pred cCCceEEEECCCCCHHH-HHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhCCCEEEEcHHHHHHHHhhhhhhh
Confidence 45678999999854100 00000111100 1157999999999999999998521 1789999987765443211
Q ss_pred -------------ccC--------------------CCceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcE
Q 012419 184 -------------LVN--------------------PSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQC 229 (464)
Q Consensus 184 -------------~~~--------------------~~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ 229 (464)
+.+ ......+..|+.+.+++.+++++++ ||++|+++|++. + .+
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~tpGHt~g~~~~~~~--~-~~ 184 (317)
T 2zo4_A 108 AFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAAFYLE--E-EG 184 (317)
T ss_dssp TSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEECCSSSTTCEEEEET--T-TT
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEECCCCCcccEEEEeC--C-CC
Confidence 111 1235678889999999999999998 999999999764 3 36
Q ss_pred EEEECCCCCC
Q 012419 230 YLHTGDFRAS 239 (464)
Q Consensus 230 ilytGD~~~~ 239 (464)
++|+||+-+.
T Consensus 185 ~lf~GD~~~~ 194 (317)
T 2zo4_A 185 VLLAGDALLE 194 (317)
T ss_dssp EEEEETSCCS
T ss_pred EEEECCEecC
Confidence 9999999764
No 53
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.09 E-value=1.4e-11 Score=120.55 Aligned_cols=123 Identities=14% Similarity=0.051 Sum_probs=83.6
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc---C---CCCcEEeCHHHHHHHHHhhc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---W---SHGPIYCSPLTARLVRMCLL 184 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---~---~~~~Iy~s~~t~~~l~~~~~ 184 (464)
.++..+++|||............+.+.... .+|++||+||.|.||+||++.. . ...++|+++.+.... ..+.
T Consensus 39 ~~~~~ilID~G~~~~~~~~~~l~~~l~~~~-~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~~-~~~~ 116 (289)
T 4ad9_A 39 TGPRRILIDTGEPAIPEYISCLKQALTEFN-TAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQRE-EIIG 116 (289)
T ss_dssp SSSSEEEECCCSTTCHHHHHHHHHHHHHTT-CCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCSSCCC-CCBT
T ss_pred cCCceEEEeCCCCCChHHHHHHHHHHHHcC-CCceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCCcchh-hhcc
Confidence 466789999996321000000111111112 3799999999999999999852 2 467899876432110 0111
Q ss_pred cCCCceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCC
Q 012419 185 VNPSYIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 185 ~~~~~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~ 238 (464)
.....+..+..|+.+.+++.+++++.+ ||++|+++|+++ ++ +++|+||+-+
T Consensus 117 ~~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~~~~~~--~~-~~lftGD~~~ 168 (289)
T 4ad9_A 117 NGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLE--EE-NAIFSGDCIL 168 (289)
T ss_dssp TTTBCEEECCTTCEEEETTEEEEEEECCSSSTTCEEEEET--TT-TEEEEETSSC
T ss_pred CCCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEc--CC-CEEEEecccC
Confidence 123457889999999999999999998 999999999986 33 5999999854
No 54
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.09 E-value=5.3e-11 Score=115.37 Aligned_cols=110 Identities=22% Similarity=0.164 Sum_probs=79.5
Q ss_pred CceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 113 ~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
+..+++|+|.... .++.+.... .+|++||+||.|.||++|+... .++.+||+++... +..
T Consensus 23 ~~~vlID~G~~~~------i~~~l~~~g-~~i~~IllTH~H~DH~gg~~~l~~~~~~~~v~~~~~~~----------~~~ 85 (260)
T 1qh5_A 23 KEAAIVDPVQPQK------VVDAARKHG-VKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRI----------GAL 85 (260)
T ss_dssp TEEEEESCSSHHH------HHHHHHHHT-CEEEEEECCCSSHHHHTTHHHHHHHSTTCEEEESCTTS----------TTC
T ss_pred CEEEEEcCCCHHH------HHHHHHHcC-CCccEEEeCCCCccccCCHHHHHHHCCCCEEEECcccC----------CCC
Confidence 5789999994321 112111112 2589999999999999999853 3468999985321 123
Q ss_pred eEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEE-Eee-CCcEEEEECCCCCC
Q 012419 190 IHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHF-RLQ-DGQCYLHTGDFRAS 239 (464)
Q Consensus 190 ~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i-~~~-~g~~ilytGD~~~~ 239 (464)
...+..|+.+.+++.+++++++ ||++|+++|++ +.. .+.+++||||+-+.
T Consensus 86 ~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~lftGD~l~~ 138 (260)
T 1qh5_A 86 THKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFV 138 (260)
T ss_dssp SEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTEET
T ss_pred CEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEeccCCCCCCEEEEcCcccc
Confidence 4667889999999999999998 99999999998 321 13479999999553
No 55
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.09 E-value=3.5e-11 Score=116.54 Aligned_cols=107 Identities=24% Similarity=0.188 Sum_probs=79.5
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHHHHHHhhccCCC
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTARLVRMCLLVNPS 188 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (464)
++..+++|+|.... .++.+.... .+|++||+||.|.||++|+... ..+.+||+++.+. +. .
T Consensus 28 ~~~~vlID~G~~~~------i~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~~~~v~~~~~~~------~~---~ 91 (258)
T 2qed_A 28 EGRCVIVDPGEAAP------VLKAIAEHK-WMPEAIFLTHHHHDHVGGVKELLQHFPQMTVYGPAETQ------DK---G 91 (258)
T ss_dssp TSEEEEECCSCHHH------HHHHHHHHT-CEEEEEECCSCCHHHHTTHHHHHHHCTTCEEEECGGGG------GG---T
T ss_pred CCcEEEEeCCCcHH------HHHHHHHcC-CCCCEEEeCCCCccccCCHHHHHHHCCCCEEEeccccc------CC---C
Confidence 46789999995321 112111112 2689999999999999999853 3348999997652 11 2
Q ss_pred ceEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 189 YIHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 189 ~~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
....+..|+.+.+++.+++++++ ||++|+++|+ . + +++|+||+-+.
T Consensus 92 ~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~-~--~--~~lftGD~l~~ 138 (258)
T 2qed_A 92 ATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYF-S--R--PYLFCGDTLFS 138 (258)
T ss_dssp CSEECCTTCEEEETTEEEEEEECCSSSTTCEEEE-E--T--TEEEEETTEET
T ss_pred CcEEeCCCCEEEECCcEEEEEECCCCCCCCeEEE-c--C--CEEEECCCCCC
Confidence 34678899999999999999998 9999999998 2 2 59999999653
No 56
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.08 E-value=1.7e-11 Score=128.61 Aligned_cols=121 Identities=16% Similarity=0.095 Sum_probs=86.1
Q ss_pred CCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 112 LKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 112 ~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
++..++||+|.... ..++...... .+|++||+||.|.||++|+..+. .+++||+++.+...+. +...+..
T Consensus 47 ~~~~vlID~g~~~~-----~~~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~a~v~~~~~~~~~~~--~~~~~~~ 118 (466)
T 3r2u_A 47 TGEAMIIDPIRDLS-----SYIRVADEEG-LTITHAAETHIHADFASGIRDVAIKLNANIYVSGESDDTLG--YKNMPNH 118 (466)
T ss_dssp TCEEEEESCCSCCH-----HHHHHHHHHT-CEEEEEECSSCCSSSCCCHHHHHHHHCCEEEEECCSCTTTS--CCSCCTT
T ss_pred CCEEEEEcCCCCHH-----HHHHHHHHCC-CeeeEEEECCCChhhhccHHHHHHhhCCeEEECcchhhhhc--cccCCCC
Confidence 56789999994211 1111111112 35999999999999999998532 3689999876433221 1111225
Q ss_pred eEEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEee----CCcEEEEECCCCCCc
Q 012419 190 IHPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQ----DGQCYLHTGDFRASR 240 (464)
Q Consensus 190 ~~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~----~g~~ilytGD~~~~~ 240 (464)
...+..|+.+.+++++|+++++ ||++|+++|+++.. ++.+++||||+-+..
T Consensus 119 ~~~~~~g~~l~~g~~~l~vi~tPGHT~g~~~~~~~~~~~~~~~~~~lftGD~lf~~ 174 (466)
T 3r2u_A 119 THFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVG 174 (466)
T ss_dssp CEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECGGGTCCSCCEEEEETTBCSS
T ss_pred CEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEcCCCccCCCceEEEECCcccCC
Confidence 6788999999999999999998 89999999999852 233599999997643
No 57
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.06 E-value=5.9e-12 Score=120.06 Aligned_cols=124 Identities=13% Similarity=0.073 Sum_probs=82.4
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
.++..+++|||....... ..++........+|++||+||.|.||++|++... .+++||+++.+.+.+..........
T Consensus 55 ~~~~~iLID~G~~~~~~~--~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~ 132 (243)
T 4hl2_A 55 DGGRVLVVDTAWTDDQTA--QILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAAQH 132 (243)
T ss_dssp ETTEEEEESCCSSHHHHH--HHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEEHHHHHHGGGTTCCCCSE
T ss_pred ECCcEEEEECCCCCccHH--HHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhCCCeEEECHHHHHHHhccccccccc
Confidence 467799999996321000 0111111110146999999999999999998532 2789999999987765332111111
Q ss_pred ------eEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 190 ------IHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 190 ------~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
...+..++.+.+++++|.....||++|+++++++ + .+++|+||+-+.
T Consensus 133 ~~~~~~~~~~~~g~~~~~g~~~v~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~~ 185 (243)
T 4hl2_A 133 SLTFAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGID--G-TDIAFGGCLIKD 185 (243)
T ss_dssp EECBCTTSBBCGGGSTTCTTEEEECCCSSSSTTCCEEEET--T-TTEEECTTTCCC
T ss_pred ccccccceEecCCCeEEECCEEEEeCCCCCCcCCEEEEEc--C-CCEEEEcceeee
Confidence 1235667788889999933345999999999986 3 359999998764
No 58
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=98.99 E-value=3.9e-10 Score=106.66 Aligned_cols=122 Identities=15% Similarity=0.149 Sum_probs=87.1
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
.++..+++|||...... ...++.+......+|++||+||.|.||++|++... .+++||+++.+.+.+... +.. ..
T Consensus 44 ~~~~~iLiD~G~~~~~~--~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~-~~~-~~ 119 (232)
T 1a7t_A 44 NNHQAALLDTPINDAQT--EMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQRKGVQSYANQMTIDLAKEK-GLP-VP 119 (232)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHH-TCC-CC
T ss_pred eCCEEEEEeCCCCHHHH--HHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHhCCCeEEEcHHHHHHHHhc-CCC-CC
Confidence 46778999999742100 00111111000257999999999999999998532 478999999998877543 221 23
Q ss_pred eEEcCCCCEEEECCEEEEEEE--cCCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 190 IHPLELNTEHVIDGVKVTLLE--ANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 190 ~~~v~~~~~~~i~~~~v~~~~--agH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
...+..++.+.+++.+++++. .||++|+++|+++ ++ +++|+||+...
T Consensus 120 ~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~~-~~lf~GD~~~~ 168 (232)
T 1a7t_A 120 EHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLP--TE-NILFGGCMLKD 168 (232)
T ss_dssp SEEESSEEEEEETTEEEEEECCCCSSSTTCCEEEET--TT-TEEEEETTSCC
T ss_pred ceecCCCCEEEECCeEEEEEeCCCCCCCCCEEEEEC--CC-CEEEEcCcccc
Confidence 456788899999999999995 4999999999885 33 69999999764
No 59
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=98.98 E-value=1.6e-10 Score=111.66 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=81.0
Q ss_pred CceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC--CCCcEEeCHHHHHHHHHhhccCCCce
Q 012419 113 KKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW--SHGPIYCSPLTARLVRMCLLVNPSYI 190 (464)
Q Consensus 113 ~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~--~~~~Iy~s~~t~~~l~~~~~~~~~~~ 190 (464)
+..+++|+|.... .++.+.... .+|++||+||.|.||++|++... .+.+||+++.+...+. ...
T Consensus 23 ~~~~lID~g~~~~------i~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~~~~v~~~~~~~~~~~-------~~~ 88 (254)
T 1xm8_A 23 GTVGVVDPSEAEP------IIDSLKRSG-RNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMDKDRIP-------GID 88 (254)
T ss_dssp CCEEEECCSSHHH------HHHHHHHHT-CCCCEEECSSCCHHHHTTHHHHHHHHCCEEEEEGGGGGGST-------TEE
T ss_pred CEEEEEeCCCHHH------HHHHHHHcC-CCccEEEECCCCCcccccHHHHHHHcCCeEEEchhhhhcCC-------CCc
Confidence 4578999985321 111111112 36899999999999999998532 3679999987654321 134
Q ss_pred EEcCCCCEEEECCEEEEEEEc-CCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 191 HPLELNTEHVIDGVKVTLLEA-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 191 ~~v~~~~~~~i~~~~v~~~~a-gH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
..+..|+.+.+++.+++++++ ||++|+++|+++. .+++|+||+-+.
T Consensus 89 ~~~~~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~~---~~~lftGD~l~~ 135 (254)
T 1xm8_A 89 MALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPG---SRAIFTGDTMFS 135 (254)
T ss_dssp EEECTTCEEEETTEEEEEEECCSSSSSCEEEEEGG---GTEEEEETTEET
T ss_pred eeeCCCCEEEECCEEEEEEECCCCCCCcEEEEECC---CCEEEEcCcccc
Confidence 678899999999999999997 9999999999862 359999999654
No 60
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=98.98 E-value=7e-11 Score=111.32 Aligned_cols=123 Identities=13% Similarity=0.026 Sum_probs=77.4
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhhc-----
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLL----- 184 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~----- 184 (464)
.++..+++|||....... ...+........+|++||+||.|.||+||++... .+++||+++.+.+.+.....
T Consensus 33 ~~~~~iLiD~G~~~~~~~--~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 110 (233)
T 3q6v_A 33 GTDGITIIGATWTPETAE--TLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKTLGAKIVATQMTYDLQKSQWGSIVNF 110 (233)
T ss_dssp CSSCEEEESCCSSHHHHH--HHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHH
T ss_pred eCCeEEEEECCCCHHHHH--HHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhhCCCEEEEcHHHHHHHHhhhHHHHHH
Confidence 567789999997431100 0011110001268999999999999999998643 57899999999887654321
Q ss_pred -------cC----CCceEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 185 -------VN----PSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 185 -------~~----~~~~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
.. ......+..+..+..+++++.....||++|+++++++ +. +++| ||.-+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~pGHt~g~~~~~~~--~~-~~lf-gD~~~~ 172 (233)
T 3q6v_A 111 TRQGNNKYPNLEKSLPDTVFPGDFNLQNGSIRAMYLGEAHTKDGIFVYFP--AE-RVLY-GNCILK 172 (233)
T ss_dssp HHHHSTTCCCCCCCCCSEEESSCEEETTTTEEEECCCCSSSSSCCEEEET--TT-TEEE-CTTTSC
T ss_pred HhccccccccccccCCCEEeCCCeEEcCceEEEEECCCCCCcCcEEEEec--cC-CEEE-Cceecc
Confidence 00 0112234444333334566555556999999999886 33 4888 998654
No 61
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.96 E-value=8.1e-11 Score=111.21 Aligned_cols=119 Identities=20% Similarity=0.205 Sum_probs=80.1
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
.++..+++|||...... ...++.+.... .+|++||+||.|.||++|+.... .+++||+++.+.+.+.......+.
T Consensus 40 ~~~~~iliD~g~~~~~~--~~~~~~l~~~g-~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~- 115 (228)
T 1jjt_A 40 VNAEAYLIDTPFTAKDT--EKLVTWFVERG-YKIKGSISSHFHSDSTGGIEWLNSRSIPTYASELTNELLKKDGKVQAT- 115 (228)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHTTT-CEEEEEECSSSSHHHHTTHHHHHHTTCCEEEEHHHHHHHHHTTCCCCS-
T ss_pred ECCcEEEEeCCCChhhH--HHHHHHHHHcC-CCeeEEEeCCCChhhhccHHHHHhCCCEEEEChHHHHHHHhcCCcCcc-
Confidence 45678999999742100 00111111112 37899999999999999998532 378999999998877643211111
Q ss_pred eEEcCCCCEEEECCEEEEEE-Ec-CCCCCceEEEEEeeCCcEEEEECCCCC
Q 012419 190 IHPLELNTEHVIDGVKVTLL-EA-NHCPGAALIHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 190 ~~~v~~~~~~~i~~~~v~~~-~a-gH~~gs~~~~i~~~~g~~ilytGD~~~ 238 (464)
..+ .++.+.+++.+++++ ++ ||++|+++|+++ + .+++|+||+-.
T Consensus 116 -~~~-~g~~~~l~~~~i~~~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~ 161 (228)
T 1jjt_A 116 -NSF-SGVNYWLVKNKIEVFYPGPGHTPDNVVVWLP--E-RKILFGGCFIK 161 (228)
T ss_dssp -EEE-CSSCCEEETTTEEEECCCCSSSTTCCEEEET--T-TTEEEEETTCC
T ss_pred -ccc-cCcceEecCceEEEEecCCCCCCCcEEEEEC--C-CcEEEEecccc
Confidence 222 256667777778876 54 999999999886 3 36999999975
No 62
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=98.95 E-value=6.6e-10 Score=104.68 Aligned_cols=122 Identities=18% Similarity=0.145 Sum_probs=85.5
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
.++..+++|||...... ...++.+......+|++||+||.|.||++|++... .+++||+++.+.+.++.. +.. ..
T Consensus 48 ~~~~~iliD~G~~~~~~--~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~-~~~-~~ 123 (227)
T 1mqo_A 48 TSKGLVLVDSSWDDKLT--KELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKERGIKAHSTALTAELAKKN-GYE-EP 123 (227)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHHTCEEECBHHHHHHHHHT-TCC-CC
T ss_pred eCCeEEEEECCCChHHH--HHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhCCcEEEeccchHHHHHhc-CCC-CC
Confidence 46778999999753100 00111111101268999999999999999998532 267999999988776532 221 23
Q ss_pred eEEcCCCCEEEECCEEEEEE-E-cCCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 190 IHPLELNTEHVIDGVKVTLL-E-ANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 190 ~~~v~~~~~~~i~~~~v~~~-~-agH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
...+..++.+.+++++|+++ + .||++|+++|+++ + .+++|+||+...
T Consensus 124 ~~~~~~~~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~-~~~lf~GD~~~~ 172 (227)
T 1mqo_A 124 LGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLP--Q-YNILVGGCLVKS 172 (227)
T ss_dssp CCCBCSEEEEEETTEEEEEECCCCSSSSSCCEEEET--T-TTEEEEETTSCC
T ss_pred ccccCCCCeeeECCEEEEEEecCCCCCCCCEEEEEC--C-CCEEEEeeeeec
Confidence 34567788899999999987 3 4999999999885 3 369999998653
No 63
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.93 E-value=1.2e-10 Score=109.19 Aligned_cols=120 Identities=16% Similarity=0.101 Sum_probs=76.6
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhhc-----
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLL----- 184 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~----- 184 (464)
.++..+++|||....... ...+.+......+|++||+||.|.||+||+.... ++++||+++.+...+.....
T Consensus 30 ~~~~~iLiD~G~~~~~~~--~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~ 107 (227)
T 3iog_A 30 GAKGVTVVGATWTPDTAR--ELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKSIGAKVVSTRQTRDLMKSDWAEIVAF 107 (227)
T ss_dssp CSSCEEEESCCSSHHHHH--HHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHH
T ss_pred eCCeEEEEECCCChHHHH--HHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhhCCCeEEECHHHHHHHHHhhHHHHHH
Confidence 467789999997321000 0111111112368999999999999999998632 67899999999877653221
Q ss_pred ----cC-----C--CceEEcCCCCEEEECCEEEEEEE--cCCCCCceEEEEEeeCCcEEEEECCCCC
Q 012419 185 ----VN-----P--SYIHPLELNTEHVIDGVKVTLLE--ANHCPGAALIHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 185 ----~~-----~--~~~~~v~~~~~~~i~~~~v~~~~--agH~~gs~~~~i~~~~g~~ilytGD~~~ 238 (464)
.. . .....+ +..+.+++.+++++. .||++|+++++++ +. +++| ||.-+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~pGHt~g~~~~~~~--~~-~~lf-gd~l~ 168 (227)
T 3iog_A 108 TRKGLPEYPDLPLVLPNVVH--DGDFTLQEGKVRAFYAGPAHTPDGIFVYFP--DE-QVLY-GGCIL 168 (227)
T ss_dssp HHHHCTTSCCCCCCCCSEEE--SSCEEETTTTEEEECCCCSSSSSCCEEEET--TT-TEEE-CGGGS
T ss_pred hhcCCCCCCCccccCCCEee--cCeEEEcCcEEEEEecCCCCCCCcEEEEec--CC-CEEE-ccccc
Confidence 10 0 001112 234777766677776 4999999999886 33 4888 87644
No 64
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=98.90 E-value=1.8e-09 Score=102.56 Aligned_cols=121 Identities=21% Similarity=0.146 Sum_probs=81.8
Q ss_pred CceeEEcCCCCCCCCCCceEecCCCcC-CCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhh-------
Q 012419 113 KKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCL------- 183 (464)
Q Consensus 113 ~~~~lidcG~~~~~~~~~~~id~f~~~-~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~------- 183 (464)
+..+++|||....... ..++.+... ....+ +||+||.|.||+||++... .+++||+++.+.+.+....
T Consensus 40 ~~~iLiD~G~~~~~~~--~l~~~l~~~~~~~~~-~vi~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 116 (246)
T 2fhx_A 40 GTVVIVSSPFENLGTQ--TLMDWVAKTMKPKKV-VAINTHFHLDGTGGNEIYKKMGAETWSSDLTKQLRLEENKKDRIKA 116 (246)
T ss_dssp SEEEEESCCSSHHHHH--HHHHHHHHHHCCSEE-EEECCSSSHHHHTTHHHHHHTTCEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCHHHHH--HHHHHHHHhcCCCcE-EEEeCCCCccccChHHHHhhcCCEEEEcHHHHHHHHhcchhhhHHH
Confidence 3589999997421000 011111100 11344 7999999999999998532 4789999999887653211
Q ss_pred ----c-------------cCCCceEEcCCCCEEEECCEEEEEEE-c-CCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 184 ----L-------------VNPSYIHPLELNTEHVIDGVKVTLLE-A-NHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 184 ----~-------------~~~~~~~~v~~~~~~~i~~~~v~~~~-a-gH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
. ..+..+..+..|+.+.+++.+++++. + ||++|+++++++ + .+++|+||+-..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~~ 188 (246)
T 2fhx_A 117 AEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDNVVVYFP--K-KKLLFGGCMIKP 188 (246)
T ss_dssp HHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSSTTCCEEEET--T-TTEEEEETTCCS
T ss_pred HhhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEEc--C-CCEEEECCEecc
Confidence 0 01223456788999999999999984 4 999999999875 3 369999999763
No 65
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.85 E-value=3.3e-09 Score=102.69 Aligned_cols=121 Identities=19% Similarity=0.139 Sum_probs=83.1
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcC-CCCCccEEEeCccchhhhcCccccC-CCCcEEeCHHHHHHHHHhhccCCC
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRW-SHGPIYCSPLTARLVRMCLLVNPS 188 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~-~i~~id~I~iTH~H~DHiggL~~~~-~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (464)
.++..+++|+|....... ..++.+... . .+|++|++||.|.||+||+.... .+.+||+++.+.+.+.........
T Consensus 75 ~~~~~iLID~G~~~~~~~--~l~~~l~~~~g-~~i~~VilTH~H~DH~gg~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~ 151 (265)
T 2y8b_A 75 DADELLLIDTAWGAKNTV--ALLAEIEKQIG-LPVTRSISTHFHDDRVGGVDVLRAAGVATYTSPLTRQLAEAAGNEVPA 151 (265)
T ss_dssp ETTEEEEESCCSSHHHHH--HHHHHHHHHTC-SCEEEEECSSSSHHHHTTHHHHHHTTCEEEECHHHHHHHHHTTCCCCS
T ss_pred ECCeEEEEeCCCCHHHHH--HHHHHHHHhcC-CCeEEEEeCCCChhhcCCHHHHhhCCCeEEECHHHHHHHHhccccccc
Confidence 567889999997421000 011111111 1 37999999999999999998532 378999999998877654321111
Q ss_pred ceEEc----CCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 189 YIHPL----ELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 189 ~~~~v----~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
.++ +.++.+.++++++.....||++|+++|+++ + .+++|+||+-..
T Consensus 152 --~~~~~~~~~~~~~~~g~~~v~~~~pGHt~g~~~~~~~--~-~~~lf~GD~~~~ 201 (265)
T 2y8b_A 152 --HSLKALSSSGDVVRFGPVEVFYPGAAHSGDNLVVYVP--A-VRVLFGGCAVHE 201 (265)
T ss_dssp --EECSSCSSTTEEEEETTEEEEECCSSSSTTCCEEEET--T-TTEEEEETTSCC
T ss_pred --ccccccCCCCcEEeecCEEEEecCCCCCCCCEEEEec--C-CCEEEEcccccc
Confidence 122 567788888888864556999999999886 3 369999999765
No 66
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.74 E-value=7e-09 Score=113.12 Aligned_cols=124 Identities=12% Similarity=0.027 Sum_probs=83.1
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCc-CCCCCccEEEeCccchhhhcCcccc-------CCCCcEEeCHHHHHHHH--
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRY-GSIKGCSAYFLTHFHYDHYGGLGKR-------WSHGPIYCSPLTARLVR-- 180 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~-~~i~~id~I~iTH~H~DHiggL~~~-------~~~~~Iy~s~~t~~~l~-- 180 (464)
.++..++||+|....... ..+..+.. ....+|++|++||.|.||+||+... ..+++||+++.+.+.+.
T Consensus 130 ~~~g~iLIDtG~~~~~a~--~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~~~~~~~e 207 (658)
T 2cfu_A 130 GDSGWIVVDTLTTPATAR--AAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAAIKE 207 (658)
T ss_dssp CSSSEEEECCCSSHHHHH--HHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHHC--
T ss_pred ECCEEEEEECCCCHHHHH--HHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhHHHHHhhh
Confidence 456789999998542100 01111100 0126899999999999999999864 35789999988755331
Q ss_pred -------------Hhhcc--CC----------------------CceEEc-CCCCEEEECCEEEEEEEc-CC-CCCceEE
Q 012419 181 -------------MCLLV--NP----------------------SYIHPL-ELNTEHVIDGVKVTLLEA-NH-CPGAALI 220 (464)
Q Consensus 181 -------------~~~~~--~~----------------------~~~~~v-~~~~~~~i~~~~v~~~~a-gH-~~gs~~~ 220 (464)
..++. +. .....+ +.|+.+.++|.+++++++ || ++|++++
T Consensus 208 ~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lgg~~l~vi~tPGHhTpg~i~~ 287 (658)
T 2cfu_A 208 NVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTPGTESPAEMNI 287 (658)
T ss_dssp -CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEETTEEEEEEECTTSSSSSBEEE
T ss_pred hhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEECCEEEEEEeCCCCCCCCcEEE
Confidence 01111 00 011334 477888999999999998 88 9999999
Q ss_pred EEEeeCCcEEEEECCCCCC
Q 012419 221 HFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 221 ~i~~~~g~~ilytGD~~~~ 239 (464)
++. +. +++|+||.-..
T Consensus 288 ~~p--~~-~vLftGD~v~~ 303 (658)
T 2cfu_A 288 WLP--RQ-KALLMAENVVG 303 (658)
T ss_dssp EET--TT-TEEECTTTSCS
T ss_pred EEC--CC-CEEEEeccccc
Confidence 886 33 59999998654
No 67
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.73 E-value=5.9e-10 Score=108.32 Aligned_cols=124 Identities=13% Similarity=0.052 Sum_probs=79.3
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc-CCCCcEEeCHHHHHHHHHhhccCCCc
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR-WSHGPIYCSPLTARLVRMCLLVNPSY 189 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~-~~~~~Iy~s~~t~~~l~~~~~~~~~~ 189 (464)
.++..++||+|...... ...++......-.+|++|++||.|.||+||+..+ ...+++|+++.+.+.++.........
T Consensus 82 ~~~~~ilIDtg~~~~~~--~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~ 159 (270)
T 4eyb_A 82 DGGRVLVVDTAWTDDQT--AQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYANALSNQLAPQEGMVAAQH 159 (270)
T ss_dssp ETTEEEEESCCSSHHHH--HHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHTTCEEEEEHHHHHHGGGGTCCCCSE
T ss_pred ECCEEEEEeCCCCHHHH--HHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHCCCeEEECHHHHHHHHhcCcccccc
Confidence 57889999999743210 0122222111125799999999999999999863 24789999999988765432211111
Q ss_pred eE------EcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 190 IH------PLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 190 ~~------~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
.. .+..+..+..+++.+.....||++|++++++.. . +++|+||+-+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~pgHT~g~~~~~~~~--~-~vLfsGD~l~~ 212 (270)
T 4eyb_A 160 SLTFAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGIDG--T-DIAFGGCLIKD 212 (270)
T ss_dssp EECBCTTSBBCGGGSTTCTTEEEECCCSSSSSSCCEEEETT--S-SEEECTTTCCC
T ss_pred ccCCCCceeecCceeeecCceeEEecccccCCCCEEEEecC--C-cEEEEeCeecC
Confidence 11 122233333456665555569999999988763 2 59999998654
No 68
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.99 E-value=6.8e-09 Score=113.08 Aligned_cols=123 Identities=16% Similarity=0.101 Sum_probs=80.2
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcC-CCCCccEEEeCccchhhhcCccccC-------CCCcEEeCHHHHHH--HH
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYG-SIKGCSAYFLTHFHYDHYGGLGKRW-------SHGPIYCSPLTARL--VR 180 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~-~i~~id~I~iTH~H~DHiggL~~~~-------~~~~Iy~s~~t~~~--l~ 180 (464)
.++..++||+|....... ..++.+... ...+|++|++||.|.||+||+.... .+++||+++.+.+. ..
T Consensus 140 ~~~~~iLIDtG~~~~~a~--~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~e~~~~e 217 (668)
T 2yhe_A 140 GDSGLVLIDTLTTAETAR--AALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFMEHAVSE 217 (668)
Confidence 456789999997542111 112222110 1267999999999999999998643 46899999886321 10
Q ss_pred -------------Hhhc--cCC------------------------CceEEcCCCCEEEECCEEEEEEEc-C-CCCCceE
Q 012419 181 -------------MCLL--VNP------------------------SYIHPLELNTEHVIDGVKVTLLEA-N-HCPGAAL 219 (464)
Q Consensus 181 -------------~~~~--~~~------------------------~~~~~v~~~~~~~i~~~~v~~~~a-g-H~~gs~~ 219 (464)
..++ .+. .....++.++.+.+++.+++++.+ | |++|+++
T Consensus 218 ~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lgg~~l~vi~tPG~Htpg~i~ 297 (668)
T 2yhe_A 218 NILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVDGVELEFQLTLGSEAPSDMN 297 (668)
Confidence 0111 000 001123457788889999999988 6 9999999
Q ss_pred EEEEeeCCcEEEEECCCCC
Q 012419 220 IHFRLQDGQCYLHTGDFRA 238 (464)
Q Consensus 220 ~~i~~~~g~~ilytGD~~~ 238 (464)
+++.. .+++|+||.-.
T Consensus 298 ~~~p~---~~vLftGD~~~ 313 (668)
T 2yhe_A 298 IYLPQ---FKVLNTADNAP 313 (668)
Confidence 98863 36999999855
No 69
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.44 E-value=1.2e-08 Score=94.31 Aligned_cols=109 Identities=18% Similarity=0.115 Sum_probs=73.7
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc--CCCCcEEeCHHHHHHHHHhhccCCC
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR--WSHGPIYCSPLTARLVRMCLLVNPS 188 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~--~~~~~Iy~s~~t~~~l~~~~~~~~~ 188 (464)
.++..+++|||.... . .++.+. ...+|++|++||. ||++|+... .++.+||+++.+.+.+. ..
T Consensus 31 ~~~~~iliD~g~~~~--~---~~~~l~--~~g~i~~ii~TH~--DH~gg~~~~~~~~~a~v~~~~~~~~~~~----~~-- 95 (201)
T 2p97_A 31 RPEGNILIDPVALSN--H---DWKHLE--SLGGVVWIVLTNS--DHVRSAKEIADQTYTKIAGPVAEKENFP----IY-- 95 (201)
T ss_dssp CTTCCEEESCCCCCH--H---HHHHHH--HTTCCSEEECSSG--GGCTTHHHHHHHSCCEEEEEGGGTTSCS----SC--
T ss_pred eCCeeEEEECCCCcH--H---HHHHHH--hcCCCCEEEECCc--hhhhhHHHHHHhcCCEEEEcHhHhhhhc----cc--
Confidence 456789999994221 0 111111 1138999999999 999999853 23589999988754331 11
Q ss_pred ceEEcCCCCEEEECCEEEEEEEcCCCCCceEEEEEeeCCcEEEEECCCCCC
Q 012419 189 YIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHTGDFRAS 239 (464)
Q Consensus 189 ~~~~v~~~~~~~i~~~~v~~~~agH~~gs~~~~i~~~~g~~ilytGD~~~~ 239 (464)
....+..++.+. .++++...++||++|+++|+++ + +++|+||+...
T Consensus 96 ~~~~~~~g~~~~-~~~~~~~~p~gHt~g~~~~~~~--~--~~lf~GD~~~~ 141 (201)
T 2p97_A 96 CDRWLSDGDELV-PGLKVMELQGSKTPGELALLLE--E--TTLITGDLVRA 141 (201)
T ss_dssp CSEEECTTCBSS-TTEEEEEECSSSSTTEEEEEET--T--TEEEECSSEEB
T ss_pred CceecCCCCEEc-ceEEEEECCCCCCCCcEEEEEc--C--CEEEECccccc
Confidence 134566666553 2677777777999999998876 3 59999999664
No 70
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.26 E-value=3.6e-07 Score=89.28 Aligned_cols=63 Identities=21% Similarity=0.144 Sum_probs=43.1
Q ss_pred cCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCcccc---CCCCcEEeCHHHHH
Q 012419 111 HLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKR---WSHGPIYCSPLTAR 177 (464)
Q Consensus 111 ~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~---~~~~~Iy~s~~t~~ 177 (464)
.++..+++|||....... .+.... ....+||+||+||.|.||++|++.. ..+++||+++.+.+
T Consensus 40 ~~~~~iLiD~G~~~~~~~---~l~~~g-~~~~~i~~v~lTH~H~DH~ggl~~~~~~~~~~~v~~~~~~~~ 105 (284)
T 2p4z_A 40 KGNKEIVVDTGQSENFIK---NCGLMG-IDVGRIKKVVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILN 105 (284)
T ss_dssp ETTEEEEECCCSSTHHHH---HHHHTT-CCGGGCCEEECCCSCHHHHTTHHHHHHHCTTCEEEEEGGGGS
T ss_pred ECCeEEEEeCCCCHHHHH---HHHHcC-CChhhCCEEEECCCCchhhccHHHHHHHcCCCceecCHHHHH
Confidence 467889999997532100 011110 0225799999999999999999853 35789999987753
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=97.23 E-value=9.6e-05 Score=71.53 Aligned_cols=62 Identities=19% Similarity=0.049 Sum_probs=40.7
Q ss_pred CcccccCCceeEEcCCCCCCCCCCceEecCCCcCCCCCccEEEeCccchhhhcCccccCCCCcEEeCHHHH
Q 012419 106 KSTATHLKKIVDRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSPLTA 176 (464)
Q Consensus 106 ~~~~~~~~~~~lidcG~~~~~~~~~~~id~f~~~~i~~id~I~iTH~H~DHiggL~~~~~~~~Iy~s~~t~ 176 (464)
+.+.+... +++|+|.... .+.......+...|+|++||.|.||+||++.. ++++||+++...
T Consensus 32 G~s~lie~--iLiD~G~~~~------l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l-~~~~v~~~~~~~ 93 (267)
T 3h3e_A 32 GFSVLVDS--VLFDTGKSDV------FLKNARKLGIDLPKDVLISHGHYDHAGGLLYL-SGKRVWLRKEAL 93 (267)
T ss_dssp SCEEEETT--EEECCCSSSH------HHHHHHHTTCCCCSEEECSCSCHHHHGGGGGC-CSCEEEEEGGGG
T ss_pred EeHHeeee--EEEECCCcHH------HHHHHHHCCcCcCCEEEECCCChhhhCCHHHh-cCCEEEECHHHH
Confidence 44444333 9999997531 11111111111119999999999999999987 788999987654
No 72
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=78.15 E-value=1.3 Score=48.41 Aligned_cols=49 Identities=8% Similarity=0.053 Sum_probs=43.9
Q ss_pred CEEEEeEeccCCCCHHHHHHHHHhcCCCeEEEecccCCHHHHHHHHHHHHH
Q 012419 405 NITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSFFRE 455 (464)
Q Consensus 405 ~~~i~~i~~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~~~~~~l~~~l~~ 455 (464)
+|++.-+-|++=+|..-|+.++..++|+++| ++||..+..+.|++.++.
T Consensus 652 ~c~v~fiD~~g~~D~rs~~~i~~~~~Prkli--lv~g~~~~~~~l~~~~~~ 700 (717)
T 2i7x_A 652 KCSVVILNLQSLVDQRSASIIWPSLKSRKIV--LSAPKQIQNEEITAKLIK 700 (717)
T ss_dssp CSEEEECCCCCSCCHHHHHHHGGGSCCSEEE--ECSCGGGSCHHHHHHHHH
T ss_pred EEEEEEEecCCCCcHHHHHHHHHhcCCcEEE--EeCCCHHHHHHHHHHHHh
Confidence 4556667899999999999999999999999 999999999989888764
No 73
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=44.08 E-value=22 Score=32.98 Aligned_cols=26 Identities=19% Similarity=0.040 Sum_probs=23.7
Q ss_pred cCCCCHHHHHHHHHhcCCCeEEEecc
Q 012419 414 SEHSSFTELREFVQFLRPDKIIPTVN 439 (464)
Q Consensus 414 S~Had~~eL~~~v~~l~Pk~ViP~~~ 439 (464)
..|.+.+|..++++.++|+++||+|.
T Consensus 202 ~~hm~~~ea~~~~~~l~~~~vi~~H~ 227 (264)
T 3rpc_A 202 SIIMGTKDIGRMVVRKPEAKIIAVHM 227 (264)
T ss_dssp CSSCCHHHHHHHHHHCTTSEEEEESC
T ss_pred CcccCHHHHHHHHHhCCcCeEEEEcc
Confidence 56999999999999999999998854
No 74
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=40.88 E-value=10 Score=34.86 Aligned_cols=39 Identities=5% Similarity=0.176 Sum_probs=28.9
Q ss_pred ccCCCCHHHHHHHHHhcCCCeEEEecccCCHHHHHHHHHHH
Q 012419 413 YSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSFF 453 (464)
Q Consensus 413 ~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~~~~~~l~~~l 453 (464)
-..|.+.+|..++++.++|+.+||+| -+....++|++.+
T Consensus 184 ~~~h~~~~ea~~~~~~l~~k~vip~H--~~~~~~~~~~~~l 222 (235)
T 3kl7_A 184 QPYTMTVSQAAKAARMFSPKILYPYH--YGDTKIGELKDAL 222 (235)
T ss_dssp TTTSCCHHHHHHHHHHHCCSEEEEES--CTTCCTTHHHHHT
T ss_pred CCcccCHHHHHHHHHHcCCCEEEEEc--CCCCCHHHHHHHH
Confidence 45799999999999999999999885 3333344444444
No 75
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=33.47 E-value=33 Score=33.44 Aligned_cols=25 Identities=12% Similarity=0.242 Sum_probs=22.9
Q ss_pred cCCCCHHHHHHHHHhcCCCeEEEec
Q 012419 414 SEHSSFTELREFVQFLRPDKIIPTV 438 (464)
Q Consensus 414 S~Had~~eL~~~v~~l~Pk~ViP~~ 438 (464)
+.|++..|..++++.++|+++||+|
T Consensus 257 ~~h~~~~ea~~~~~~l~~k~vi~~H 281 (360)
T 2wyl_A 257 TDKMTSADMLRMGEALNAKVVIPFH 281 (360)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEES
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEe
Confidence 5699999999999999999999874
No 76
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=30.22 E-value=37 Score=32.03 Aligned_cols=41 Identities=12% Similarity=0.090 Sum_probs=26.4
Q ss_pred eEeccCCCCH---HHHHHHHHhcCCCeEEEecccCCHHHHHHHHHH
Q 012419 410 GVPYSEHSSF---TELREFVQFLRPDKIIPTVNVWNAASREKMQSF 452 (464)
Q Consensus 410 ~i~~S~Had~---~eL~~~v~~l~Pk~ViP~~~hg~~~~~~~l~~~ 452 (464)
++++.. ++. ++..+++++++|++++|+|..|.. ....|++.
T Consensus 206 GfHL~~-~~~~~l~~tl~~l~~~~~~~i~~~HCTg~~-a~~~L~~~ 249 (267)
T 3h3e_A 206 GFHLLK-SSDDEIEKIVKAFNELGVETVVPCHCTGER-AVDIFKRE 249 (267)
T ss_dssp ECCCTT-SCHHHHHHHHHHHHHTTCCEEEEETTSCHH-HHHHHHHH
T ss_pred ccccCC-CCHHHHHHHHHHHHhcCCCEEEEECCCCHH-HHHHHHHH
Confidence 356544 344 455667777899999999888764 34444443
No 77
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=29.28 E-value=37 Score=33.50 Aligned_cols=25 Identities=8% Similarity=0.167 Sum_probs=22.9
Q ss_pred cCCCCHHHHHHHHHhcCCCeEEEec
Q 012419 414 SEHSSFTELREFVQFLRPDKIIPTV 438 (464)
Q Consensus 414 S~Had~~eL~~~v~~l~Pk~ViP~~ 438 (464)
..|.+..+..++++.++|+++||+|
T Consensus 282 ~~h~~~~ea~~~~~~l~~k~vi~~H 306 (379)
T 3bv6_A 282 TDKMTSSDVLRAAESLDCQVVVPFH 306 (379)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEES
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEe
Confidence 4699999999999999999999874
No 78
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=27.51 E-value=46 Score=30.03 Aligned_cols=27 Identities=22% Similarity=0.230 Sum_probs=23.9
Q ss_pred cCCCCHHHHHHHHHhcCCCeEEEeccc
Q 012419 414 SEHSSFTELREFVQFLRPDKIIPTVNV 440 (464)
Q Consensus 414 S~Had~~eL~~~v~~l~Pk~ViP~~~h 440 (464)
..|.+.++..++++.++|+.++|+|.-
T Consensus 149 ~~h~~~~~a~~~~~~~~~k~vi~~H~~ 175 (220)
T 1vjn_A 149 TYTIGPKEAKEVADLLNAKVIIPMHYK 175 (220)
T ss_dssp SSSCCHHHHHHHHHHTTCSEEEEESCC
T ss_pred cCcCCHHHHHHHHHhcCCCEEEEEecc
Confidence 369999999999999999999988543
No 79
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=26.59 E-value=62 Score=29.58 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=24.2
Q ss_pred ccCCCCHHHHHHHHHhcCCCeEEEecccCCHH
Q 012419 413 YSEHSSFTELREFVQFLRPDKIIPTVNVWNAA 444 (464)
Q Consensus 413 ~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~~ 444 (464)
-.+|++..+..++++.+++++++++ |=+.+
T Consensus 219 ~~~H~t~~~a~~~~~~~~~~~lvl~--H~~~~ 248 (280)
T 2e7y_A 219 YKNHAAIDEVMESVKAAGVKKVILY--HISTR 248 (280)
T ss_dssp --CCCBHHHHHHHHHHHTCCEEEEE--SCCGG
T ss_pred hcCCCCHHHHHHHHHHcCCCEEEEE--eecCc
Confidence 3579999999999999999999966 55543
No 80
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=22.53 E-value=73 Score=29.70 Aligned_cols=29 Identities=21% Similarity=0.027 Sum_probs=24.6
Q ss_pred ccCCCCHHHHHHHHHhcCCCeEEEecccC
Q 012419 413 YSEHSSFTELREFVQFLRPDKIIPTVNVW 441 (464)
Q Consensus 413 ~S~Had~~eL~~~v~~l~Pk~ViP~~~hg 441 (464)
-.+|++..|..++++.++++++|++|.-.
T Consensus 246 ~~~H~t~~~a~~~a~~~~~~~lvl~H~s~ 274 (306)
T 2cbn_A 246 SRGHSSTRQAATLAREAGVGKLIITHVSS 274 (306)
T ss_dssp HTTCCBHHHHHHHHHHHTCSEEEEECBCT
T ss_pred hcCCCCHHHHHHHHHHcCCcEEEEEeecC
Confidence 46799999999999999999999765433
No 81
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=22.05 E-value=72 Score=29.17 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=22.8
Q ss_pred cCCCCHHHHHHHHHhcCCCeEEEec
Q 012419 414 SEHSSFTELREFVQFLRPDKIIPTV 438 (464)
Q Consensus 414 S~Had~~eL~~~v~~l~Pk~ViP~~ 438 (464)
.+|.+..+..++++.++|++++|+|
T Consensus 211 ~~H~~~~~a~~~~~~~~~~~lil~H 235 (268)
T 1zkp_A 211 AGHMNSTEVASIAKDANVKELLLTH 235 (268)
T ss_dssp GTCCBHHHHHHHHHHTTCSEEEEES
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 4599999999999999999999775
No 82
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=21.52 E-value=85 Score=29.34 Aligned_cols=30 Identities=30% Similarity=0.339 Sum_probs=25.8
Q ss_pred eccCCCCHHHHHHHHHhcCCCeEEEecccC
Q 012419 412 PYSEHSSFTELREFVQFLRPDKIIPTVNVW 441 (464)
Q Consensus 412 ~~S~Had~~eL~~~v~~l~Pk~ViP~~~hg 441 (464)
+...|++.++..++++.++|+++|++|..-
T Consensus 236 ~~~~H~~~~~a~~~~~~~~~k~lvl~H~~~ 265 (293)
T 3md7_A 236 PHPSHFSLGEALEWIEKLSPKRAILTHMHV 265 (293)
T ss_dssp CBTTBCCHHHHHHHHHHHCCSEEEEESBCT
T ss_pred CCCCCCCHHHHHHHHHHcCCCEEEEECCCC
Confidence 356899999999999999999999776443
No 83
>2kw6_A Cyclin-dependent kinase 2-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=20.95 E-value=47 Score=24.23 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=35.1
Q ss_pred ccCCCCHHHHHHHHHhcCCCeEEEecccCCHHHHHHHHHHHHHHHhhhh
Q 012419 413 YSEHSSFTELREFVQFLRPDKIIPTVNVWNAASREKMQSFFREWLSCKK 461 (464)
Q Consensus 413 ~S~Had~~eL~~~v~~l~Pk~ViP~~~hg~~~~~~~l~~~l~~~l~~~~ 461 (464)
--.|+-|.+|+..|+.+.. .|=||. -|....+++|++-+...-...|
T Consensus 7 ~~~~~kY~~LL~VIeEmgk-dIrpTY-aGsk~~~ERLkR~I~hAr~LVr 53 (65)
T 2kw6_A 7 HHSHSKYAELLAIIEELGK-EIRPTY-AGSKSAMERLKRGIIHARGLVR 53 (65)
T ss_dssp CCCSCHHHHHHHHHHHHTT-THHHHH-TTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHhc-ccchhh-ccCcchHHHHHHHHHHHHHHHH
Confidence 3468999999999999984 344543 5888889999987766544444
No 84
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=20.19 E-value=76 Score=29.69 Aligned_cols=25 Identities=4% Similarity=-0.019 Sum_probs=21.1
Q ss_pred CHHHHHHHHHhcCCCeEEEecccCC
Q 012419 418 SFTELREFVQFLRPDKIIPTVNVWN 442 (464)
Q Consensus 418 d~~eL~~~v~~l~Pk~ViP~~~hg~ 442 (464)
...+..++++.++|++++|+|..+.
T Consensus 235 ~~~~a~~~~~~~~~~~l~l~H~~~~ 259 (284)
T 2p4z_A 235 KVKDIARKIEEYGVKKVLTGHCTGI 259 (284)
T ss_dssp HHHHHHHHHHHTTBCCEEECGGGCH
T ss_pred HHHHHHHHHHcCCCCEEEeeCcCcH
Confidence 7889999999999999998865543
Done!