Query 012424
Match_columns 464
No_of_seqs 468 out of 2942
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 09:11:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012424.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012424hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2goy_A Adenosine phosphosulfat 100.0 5.1E-60 1.7E-64 464.0 18.2 239 84-326 26-265 (275)
2 2oq2_A Phosphoadenosine phosph 100.0 7.9E-56 2.7E-60 431.1 18.8 225 85-322 14-250 (261)
3 2o8v_A Phosphoadenosine phosph 100.0 1E-54 3.6E-59 421.2 17.1 226 84-325 17-247 (252)
4 3fwk_A FMN adenylyltransferase 100.0 1.1E-44 3.7E-49 354.0 15.0 181 87-297 31-237 (308)
5 1zun_A Sulfate adenylyltransfe 100.0 4.1E-41 1.4E-45 336.4 17.3 207 87-307 27-307 (325)
6 1sur_A PAPS reductase; assimil 100.0 1.9E-38 6.5E-43 300.0 18.0 194 84-291 16-215 (215)
7 2wsi_A FAD synthetase; transfe 100.0 7.6E-39 2.6E-43 317.8 14.7 185 100-311 37-251 (306)
8 3zzx_A Thioredoxin; oxidoreduc 99.8 9E-21 3.1E-25 158.4 13.0 103 354-464 2-105 (105)
9 3h79_A Thioredoxin-like protei 99.8 3.3E-20 1.1E-24 159.3 15.5 108 351-463 14-126 (127)
10 2av4_A Thioredoxin-like protei 99.8 1.8E-19 6.2E-24 159.3 12.1 108 351-463 20-137 (160)
11 2qsi_A Putative hydrogenase ex 99.8 9.8E-20 3.4E-24 158.4 10.0 107 350-463 13-121 (137)
12 3gnj_A Thioredoxin domain prot 99.8 6.6E-19 2.2E-23 146.6 13.7 105 352-463 4-108 (111)
13 2dj1_A Protein disulfide-isome 99.8 6.5E-19 2.2E-23 153.3 14.1 105 351-463 16-122 (140)
14 2dml_A Protein disulfide-isome 99.8 1.2E-18 4E-23 149.7 14.7 107 351-463 16-122 (130)
15 2qgv_A Hydrogenase-1 operon pr 99.8 1E-19 3.5E-24 158.8 7.1 103 353-463 18-123 (140)
16 3tco_A Thioredoxin (TRXA-1); d 99.8 1.2E-18 4.1E-23 144.2 13.1 104 352-463 4-107 (109)
17 3hxs_A Thioredoxin, TRXP; elec 99.8 1.3E-18 4.4E-23 151.7 13.4 109 350-463 20-137 (141)
18 2trx_A Thioredoxin; electron t 99.8 2E-18 6.7E-23 143.1 13.3 105 352-463 2-106 (108)
19 3ga4_A Dolichyl-diphosphooligo 99.8 1.7E-18 5.8E-23 157.6 13.9 112 347-462 13-150 (178)
20 1x5d_A Protein disulfide-isome 99.8 2.1E-18 7.3E-23 148.4 13.2 105 352-463 7-115 (133)
21 3die_A Thioredoxin, TRX; elect 99.8 2.5E-18 8.4E-23 141.7 12.8 103 352-463 3-105 (106)
22 1x5e_A Thioredoxin domain cont 99.8 2.6E-18 8.8E-23 147.0 13.4 102 352-463 7-108 (126)
23 2i4a_A Thioredoxin; acidophIle 99.8 3.7E-18 1.3E-22 140.9 13.7 106 352-464 2-107 (107)
24 3uvt_A Thioredoxin domain-cont 99.8 3.2E-18 1.1E-22 142.2 12.8 104 352-463 5-110 (111)
25 1nsw_A Thioredoxin, TRX; therm 99.8 2.6E-18 8.8E-23 141.7 11.9 102 354-463 2-103 (105)
26 2yzu_A Thioredoxin; redox prot 99.8 3.8E-18 1.3E-22 141.0 12.8 103 353-463 2-104 (109)
27 3p2a_A Thioredoxin 2, putative 99.8 5.5E-18 1.9E-22 149.3 14.5 105 351-463 37-141 (148)
28 3hz4_A Thioredoxin; NYSGXRC, P 99.8 2.4E-18 8.3E-23 150.5 12.1 106 351-463 5-110 (140)
29 3qfa_C Thioredoxin; protein-pr 99.8 2E-18 6.7E-23 146.1 10.9 104 352-463 12-115 (116)
30 2voc_A Thioredoxin; electron t 99.8 2.8E-18 9.6E-23 143.9 11.6 102 353-463 2-103 (112)
31 1w4v_A Thioredoxin, mitochondr 99.8 4.9E-18 1.7E-22 144.1 13.1 107 350-463 11-117 (119)
32 1r26_A Thioredoxin; redox-acti 99.8 6E-18 2.1E-22 145.4 13.4 102 352-463 19-121 (125)
33 1t00_A Thioredoxin, TRX; redox 99.8 6.7E-18 2.3E-22 140.9 13.4 105 352-463 5-109 (112)
34 2ppt_A Thioredoxin-2; thiredox 99.8 4.8E-18 1.6E-22 151.6 13.2 104 352-463 47-150 (155)
35 2l5l_A Thioredoxin; structural 99.8 6.8E-18 2.3E-22 146.8 13.7 106 352-463 9-124 (136)
36 1thx_A Thioredoxin, thioredoxi 99.8 9.2E-18 3.2E-22 140.3 13.9 105 352-463 7-111 (115)
37 3f3q_A Thioredoxin-1; His TAG, 99.8 6.3E-18 2.1E-22 141.3 12.7 101 353-463 8-108 (109)
38 1dby_A Chloroplast thioredoxin 99.8 6.3E-18 2.2E-22 139.8 12.6 104 353-463 2-105 (107)
39 2pu9_C TRX-F, thioredoxin F-ty 99.8 8.2E-18 2.8E-22 140.5 13.0 104 352-463 5-109 (111)
40 3d6i_A Monothiol glutaredoxin- 99.8 7.7E-18 2.6E-22 140.7 12.6 106 353-463 1-107 (112)
41 2o8v_B Thioredoxin 1; disulfid 99.8 4.9E-18 1.7E-22 146.5 11.6 105 352-463 22-126 (128)
42 3aps_A DNAJ homolog subfamily 99.7 5.2E-18 1.8E-22 144.0 11.2 106 352-463 3-111 (122)
43 4euy_A Uncharacterized protein 99.7 1.4E-18 4.7E-23 144.0 7.3 97 358-463 7-103 (105)
44 1mek_A Protein disulfide isome 99.7 2.7E-18 9.1E-23 144.4 9.0 106 352-463 7-115 (120)
45 2e0q_A Thioredoxin; electron t 99.7 9.9E-18 3.4E-22 137.0 12.1 101 354-463 1-101 (104)
46 1fb6_A Thioredoxin M; electron 99.7 1.3E-17 4.4E-22 137.1 12.9 103 354-463 2-104 (105)
47 1ep7_A Thioredoxin CH1, H-type 99.7 9.4E-18 3.2E-22 139.9 11.9 106 352-463 2-109 (112)
48 1gh2_A Thioredoxin-like protei 99.7 1.8E-17 6.1E-22 137.4 13.4 103 353-463 2-105 (107)
49 2dj3_A Protein disulfide-isome 99.7 1.8E-18 6E-23 149.2 7.5 109 351-463 6-116 (133)
50 3idv_A Protein disulfide-isome 99.7 1E-17 3.5E-22 158.9 13.5 105 351-463 14-120 (241)
51 3qou_A Protein YBBN; thioredox 99.7 8.7E-18 3E-22 164.3 12.9 107 351-463 6-112 (287)
52 1syr_A Thioredoxin; SGPP, stru 99.7 1.5E-17 5.2E-22 139.3 11.9 102 352-463 9-110 (112)
53 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.5E-17 5.3E-22 140.6 11.8 105 352-463 12-116 (121)
54 1faa_A Thioredoxin F; electron 99.7 2.5E-17 8.5E-22 140.3 12.9 106 351-464 17-123 (124)
55 1xwb_A Thioredoxin; dimerizati 99.7 2.9E-17 9.9E-22 135.2 12.7 103 354-463 2-105 (106)
56 2djj_A PDI, protein disulfide- 99.7 1.1E-17 3.9E-22 141.5 9.8 105 351-463 6-115 (121)
57 3evi_A Phosducin-like protein 99.7 1.6E-17 5.6E-22 141.6 10.4 103 353-463 4-112 (118)
58 3apq_A DNAJ homolog subfamily 99.7 4.9E-17 1.7E-21 152.1 14.3 105 351-463 96-200 (210)
59 3m9j_A Thioredoxin; oxidoreduc 99.7 4.1E-17 1.4E-21 134.2 12.1 101 355-463 3-104 (105)
60 2vim_A Thioredoxin, TRX; thior 99.7 5.9E-17 2E-21 132.9 13.0 102 354-463 1-103 (104)
61 2xc2_A Thioredoxinn; oxidoredu 99.7 4.7E-17 1.6E-21 137.2 12.7 102 353-463 14-116 (117)
62 3gix_A Thioredoxin-like protei 99.7 2.6E-17 8.9E-22 145.9 11.4 103 357-463 9-119 (149)
63 2dj0_A Thioredoxin-related tra 99.7 2.7E-18 9.4E-23 149.4 4.8 104 352-460 7-116 (137)
64 3ed3_A Protein disulfide-isome 99.7 5.8E-17 2E-21 160.1 14.9 106 352-463 17-140 (298)
65 3us3_A Calsequestrin-1; calciu 99.7 4.3E-17 1.5E-21 165.6 14.3 106 350-463 11-122 (367)
66 3ul3_B Thioredoxin, thioredoxi 99.7 1.7E-17 5.8E-22 142.6 9.1 87 371-462 41-127 (128)
67 2vlu_A Thioredoxin, thioredoxi 99.7 6.7E-17 2.3E-21 137.1 12.4 104 353-463 14-118 (122)
68 1xfl_A Thioredoxin H1; AT3G510 99.7 6.6E-17 2.3E-21 138.5 12.4 105 352-463 16-122 (124)
69 2r2j_A Thioredoxin domain-cont 99.7 3.3E-17 1.1E-21 167.3 12.3 106 352-463 5-115 (382)
70 1v98_A Thioredoxin; oxidoreduc 99.7 5.4E-17 1.9E-21 141.5 11.8 104 352-463 33-136 (140)
71 1oaz_A Thioredoxin 1; immune s 99.7 1.1E-17 3.6E-22 143.4 7.0 105 352-463 3-121 (123)
72 2b5e_A Protein disulfide-isome 99.7 1.2E-16 4.1E-21 168.8 16.1 107 351-463 13-120 (504)
73 2wz9_A Glutaredoxin-3; protein 99.7 7.3E-17 2.5E-21 143.3 12.2 104 352-463 12-116 (153)
74 3dxb_A Thioredoxin N-terminall 99.7 5.8E-17 2E-21 153.0 12.0 106 351-463 11-116 (222)
75 2l6c_A Thioredoxin; oxidoreduc 99.7 5.3E-17 1.8E-21 135.8 10.2 100 354-463 5-104 (110)
76 2oe3_A Thioredoxin-3; electron 99.7 6.8E-17 2.3E-21 136.3 10.8 101 353-463 13-114 (114)
77 2j23_A Thioredoxin; immune pro 99.7 4.5E-17 1.5E-21 138.7 9.4 104 352-463 15-119 (121)
78 1qgv_A Spliceosomal protein U5 99.7 9.9E-17 3.4E-21 141.0 11.9 102 358-463 10-119 (142)
79 1sji_A Calsequestrin 2, calseq 99.7 5.9E-17 2E-21 163.4 11.8 104 351-463 10-120 (350)
80 3cxg_A Putative thioredoxin; m 99.7 4.1E-17 1.4E-21 141.6 9.1 108 348-463 16-127 (133)
81 1zma_A Bacterocin transport ac 99.7 3.9E-17 1.3E-21 138.1 8.3 102 352-462 12-118 (118)
82 3emx_A Thioredoxin; structural 99.7 3.7E-17 1.3E-21 142.1 8.0 101 351-463 15-124 (135)
83 1ti3_A Thioredoxin H, PTTRXH1; 99.7 1E-16 3.4E-21 133.7 10.1 105 352-463 4-110 (113)
84 2l57_A Uncharacterized protein 99.7 8E-17 2.7E-21 137.6 9.8 89 370-463 24-115 (126)
85 2vm1_A Thioredoxin, thioredoxi 99.7 2.2E-16 7.6E-21 132.6 12.3 105 352-463 6-112 (118)
86 3d22_A TRXH4, thioredoxin H-ty 99.7 2.3E-16 7.9E-21 137.1 11.7 105 352-463 24-130 (139)
87 2f51_A Thioredoxin; electron t 99.7 3.6E-16 1.2E-20 132.6 12.3 103 352-463 3-111 (118)
88 2dbc_A PDCL2, unnamed protein 99.7 1.6E-16 5.6E-21 138.2 10.4 104 352-463 10-119 (135)
89 3q6o_A Sulfhydryl oxidase 1; p 99.7 4.1E-16 1.4E-20 149.1 14.1 107 351-463 11-125 (244)
90 3idv_A Protein disulfide-isome 99.7 2.8E-16 9.4E-21 149.0 12.6 103 353-463 131-235 (241)
91 3f8u_A Protein disulfide-isome 99.7 2.3E-16 7.8E-21 165.5 12.8 106 353-463 2-107 (481)
92 2es7_A Q8ZP25_salty, putative 99.7 5.9E-17 2E-21 142.7 6.6 102 353-463 18-123 (142)
93 3uem_A Protein disulfide-isome 99.7 7.6E-16 2.6E-20 155.5 14.2 107 350-463 247-355 (361)
94 2c0g_A ERP29 homolog, windbeut 99.6 1.3E-15 4.4E-20 146.2 13.7 101 352-463 16-130 (248)
95 3fk8_A Disulphide isomerase; A 99.6 1.1E-15 3.9E-20 131.6 10.4 100 360-463 16-131 (133)
96 2qc7_A ERP31, ERP28, endoplasm 99.6 3.5E-15 1.2E-19 142.5 14.3 102 352-463 5-117 (240)
97 1a8l_A Protein disulfide oxido 99.6 2E-15 6.9E-20 141.9 12.1 103 354-463 118-224 (226)
98 2yj7_A LPBCA thioredoxin; oxid 99.4 3.6E-17 1.2E-21 134.1 0.0 104 353-463 2-105 (106)
99 2fwh_A Thiol:disulfide interch 99.6 2E-15 7E-20 130.8 10.2 101 358-463 18-126 (134)
100 2kuc_A Putative disulphide-iso 99.6 1.5E-15 5.2E-20 130.1 9.1 107 353-463 7-119 (130)
101 1wou_A Thioredoxin -related pr 99.6 2.2E-15 7.4E-20 128.7 9.3 103 353-462 6-122 (123)
102 2trc_P Phosducin, MEKA, PP33; 99.6 9.4E-16 3.2E-20 144.5 6.9 105 352-463 99-211 (217)
103 3f8u_A Protein disulfide-isome 99.6 7.6E-15 2.6E-19 153.9 14.5 108 350-463 350-459 (481)
104 3t58_A Sulfhydryl oxidase 1; o 99.6 9.6E-15 3.3E-19 154.5 14.9 107 352-463 12-125 (519)
105 2djk_A PDI, protein disulfide- 99.6 5.2E-15 1.8E-19 128.3 10.4 102 353-463 7-113 (133)
106 3apo_A DNAJ homolog subfamily 99.6 4.1E-15 1.4E-19 165.1 11.5 105 351-463 115-219 (780)
107 1wmj_A Thioredoxin H-type; str 99.6 3.5E-16 1.2E-20 133.8 1.7 105 352-463 14-120 (130)
108 3iv4_A Putative oxidoreductase 99.6 4.8E-15 1.6E-19 124.0 8.4 103 349-460 3-111 (112)
109 1a0r_P Phosducin, MEKA, PP33; 99.6 4.3E-15 1.5E-19 142.3 9.3 106 352-463 112-224 (245)
110 1fo5_A Thioredoxin; disulfide 99.6 5E-15 1.7E-19 116.9 7.3 82 373-463 3-84 (85)
111 2b5e_A Protein disulfide-isome 99.6 2E-14 7E-19 151.6 14.0 106 351-463 357-465 (504)
112 3qcp_A QSOX from trypanosoma b 99.6 1.6E-15 5.3E-20 157.4 4.9 95 351-448 22-124 (470)
113 1nho_A Probable thioredoxin; b 99.5 5.8E-15 2E-19 116.5 6.5 81 374-463 3-83 (85)
114 3f9u_A Putative exported cytoc 99.5 1.3E-14 4.3E-19 130.9 9.0 106 353-463 27-164 (172)
115 2ywm_A Glutaredoxin-like prote 99.5 4.8E-14 1.6E-18 133.0 11.0 98 354-463 120-218 (229)
116 2lst_A Thioredoxin; structural 99.2 3.5E-15 1.2E-19 127.9 0.0 89 371-463 18-114 (130)
117 2ju5_A Thioredoxin disulfide i 99.5 1.6E-13 5.4E-18 121.9 10.5 88 371-463 46-150 (154)
118 3or5_A Thiol:disulfide interch 99.5 2.9E-13 9.8E-18 120.2 12.1 90 371-463 33-149 (165)
119 1lu4_A Soluble secreted antige 99.5 2.8E-13 9.5E-18 116.0 11.0 86 371-463 23-134 (136)
120 1sen_A Thioredoxin-like protei 99.5 2.8E-14 9.6E-19 128.3 4.9 97 360-463 37-146 (164)
121 2b5x_A YKUV protein, TRXY; thi 99.5 5.3E-13 1.8E-17 115.8 12.8 102 355-463 15-143 (148)
122 3apo_A DNAJ homolog subfamily 99.5 3.7E-13 1.3E-17 149.4 14.8 109 352-463 543-654 (780)
123 3raz_A Thioredoxin-related pro 99.5 3.5E-13 1.2E-17 118.4 11.7 91 371-463 23-138 (151)
124 1z6n_A Hypothetical protein PA 99.5 6.1E-14 2.1E-18 126.7 6.8 99 354-461 38-139 (167)
125 3dml_A Putative uncharacterize 99.4 4.9E-14 1.7E-18 119.1 5.4 87 371-463 17-108 (116)
126 2hls_A Protein disulfide oxido 99.4 3.6E-13 1.2E-17 128.9 12.0 96 358-463 126-224 (243)
127 3kp8_A Vkorc1/thioredoxin doma 99.4 3.5E-14 1.2E-18 118.4 4.0 74 372-461 12-91 (106)
128 1zzo_A RV1677; thioredoxin fol 99.4 5.1E-13 1.8E-17 114.0 10.9 87 371-463 24-133 (136)
129 2f9s_A Thiol-disulfide oxidore 99.4 4.5E-13 1.5E-17 117.5 10.3 91 371-463 25-136 (151)
130 1a8l_A Protein disulfide oxido 99.4 3.5E-13 1.2E-17 126.6 9.5 99 360-463 10-111 (226)
131 1ilo_A Conserved hypothetical 99.4 4.5E-13 1.5E-17 103.8 8.5 74 375-460 2-76 (77)
132 3ph9_A Anterior gradient prote 99.4 6.5E-14 2.2E-18 124.3 4.1 66 371-440 43-112 (151)
133 2h30_A Thioredoxin, peptide me 99.4 2.8E-13 9.6E-18 120.2 8.2 104 353-463 22-154 (164)
134 3erw_A Sporulation thiol-disul 99.4 7E-13 2.4E-17 114.6 10.1 87 371-461 33-145 (145)
135 3lor_A Thiol-disulfide isomera 99.4 1.4E-12 4.9E-17 115.1 12.2 90 371-463 29-153 (160)
136 3ira_A Conserved protein; meth 99.4 2.7E-13 9.2E-18 123.0 7.4 79 356-440 26-116 (173)
137 3hdc_A Thioredoxin family prot 99.4 1.5E-12 5.1E-17 115.4 12.0 91 371-463 40-150 (158)
138 2lja_A Putative thiol-disulfid 99.4 8.4E-13 2.9E-17 115.6 9.9 89 371-463 29-141 (152)
139 2ywm_A Glutaredoxin-like prote 99.4 8.7E-13 3E-17 124.3 10.6 99 360-463 9-113 (229)
140 3hcz_A Possible thiol-disulfid 99.4 6.7E-13 2.3E-17 115.3 8.9 89 371-462 30-143 (148)
141 3eur_A Uncharacterized protein 99.4 1E-12 3.5E-17 114.2 9.5 86 371-462 30-142 (142)
142 3fkf_A Thiol-disulfide oxidore 99.4 1.8E-12 6.2E-17 112.5 10.8 88 371-463 32-144 (148)
143 3eyt_A Uncharacterized protein 99.4 2.1E-12 7.3E-17 113.9 11.3 90 371-463 27-150 (158)
144 3ewl_A Uncharacterized conserv 99.4 1.3E-12 4.5E-17 113.1 9.7 87 371-463 26-139 (142)
145 2l5o_A Putative thioredoxin; s 99.4 1.9E-12 6.6E-17 113.4 10.6 89 371-463 27-139 (153)
146 4evm_A Thioredoxin family prot 99.4 2.5E-12 8.4E-17 109.5 10.1 89 371-464 21-138 (138)
147 3gl3_A Putative thiol:disulfid 99.4 4.1E-12 1.4E-16 111.1 11.7 92 371-464 27-141 (152)
148 2lrn_A Thiol:disulfide interch 99.4 2.2E-12 7.6E-17 113.4 9.8 87 371-463 28-139 (152)
149 2ywb_A GMP synthase [glutamine 99.3 2.5E-12 8.6E-17 135.7 11.0 177 103-286 199-383 (503)
150 2fgx_A Putative thioredoxin; N 99.3 2.2E-12 7.4E-17 107.5 7.7 78 373-460 29-106 (107)
151 3lwa_A Secreted thiol-disulfid 99.3 5.9E-12 2E-16 114.3 11.1 90 371-463 58-179 (183)
152 3kcm_A Thioredoxin family prot 99.3 5.2E-12 1.8E-16 110.7 10.0 93 371-464 27-142 (154)
153 3ia1_A THIO-disulfide isomeras 99.3 5.4E-12 1.9E-16 110.8 10.1 85 373-463 31-142 (154)
154 2lrt_A Uncharacterized protein 99.3 1.4E-11 4.6E-16 108.8 12.1 86 371-459 34-142 (152)
155 1wy5_A TILS, hypothetical UPF0 99.3 2E-11 6.8E-16 121.4 14.3 148 113-278 25-190 (317)
156 1i5g_A Tryparedoxin II; electr 99.3 7.5E-12 2.6E-16 108.8 9.8 69 371-440 27-121 (144)
157 2dpl_A GMP synthetase, GMP syn 99.3 1.2E-11 4E-16 122.5 11.9 164 113-285 21-189 (308)
158 2b1k_A Thiol:disulfide interch 99.3 5.2E-12 1.8E-16 112.8 8.5 85 371-463 50-158 (168)
159 3fw2_A Thiol-disulfide oxidore 99.3 2.3E-11 7.7E-16 106.6 12.4 88 371-463 32-146 (150)
160 1kng_A Thiol:disulfide interch 99.3 7.4E-12 2.5E-16 109.9 8.7 87 371-463 41-150 (156)
161 3ha9_A Uncharacterized thiored 99.3 1.3E-11 4.4E-16 109.8 10.2 87 371-463 36-162 (165)
162 1ttz_A Conserved hypothetical 99.3 5.5E-12 1.9E-16 101.2 7.0 73 376-463 3-75 (87)
163 4fo5_A Thioredoxin-like protei 99.3 7.5E-12 2.6E-16 108.8 8.4 88 371-463 31-143 (143)
164 1o73_A Tryparedoxin; electron 99.3 1.7E-11 5.8E-16 106.3 9.5 74 371-447 27-126 (144)
165 1o8x_A Tryparedoxin, TRYX, TXN 99.3 1.9E-11 6.5E-16 106.6 9.8 69 371-440 27-121 (146)
166 3uem_A Protein disulfide-isome 99.2 3E-11 1E-15 121.6 12.0 106 352-463 117-228 (361)
167 2ywi_A Hypothetical conserved 99.2 2.5E-11 8.7E-16 111.1 10.4 90 371-463 44-172 (196)
168 3kh7_A Thiol:disulfide interch 99.2 3.4E-11 1.2E-15 108.9 9.3 87 371-463 57-165 (176)
169 2hyx_A Protein DIPZ; thioredox 99.2 4.6E-11 1.6E-15 120.3 10.8 91 371-463 81-197 (352)
170 3s9f_A Tryparedoxin; thioredox 99.2 8.5E-11 2.9E-15 105.3 10.7 67 371-438 47-137 (165)
171 2dlx_A UBX domain-containing p 99.2 9.9E-11 3.4E-15 103.9 10.9 116 343-463 13-134 (153)
172 1jfu_A Thiol:disulfide interch 99.2 8.2E-11 2.8E-15 106.8 10.5 92 371-463 59-178 (186)
173 2cvb_A Probable thiol-disulfid 99.2 5.4E-11 1.8E-15 108.3 8.9 88 371-463 32-157 (188)
174 2lus_A Thioredoxion; CR-Trp16, 98.8 3.7E-12 1.3E-16 110.1 0.0 75 371-448 24-126 (143)
175 3u5r_E Uncharacterized protein 99.1 1.2E-10 4.2E-15 109.2 10.1 89 371-463 57-185 (218)
176 2ls5_A Uncharacterized protein 98.8 4.2E-12 1.4E-16 112.3 0.0 88 371-463 32-146 (159)
177 3drn_A Peroxiredoxin, bacterio 99.1 2.2E-10 7.4E-15 101.9 9.9 91 371-463 27-147 (161)
178 2hls_A Protein disulfide oxido 99.1 2.1E-10 7.2E-15 109.6 10.3 93 360-462 15-114 (243)
179 3bl5_A Queuosine biosynthesis 99.1 2.3E-10 8E-15 107.0 9.2 179 113-295 4-201 (219)
180 3kp9_A Vkorc1/thioredoxin doma 99.1 2.3E-11 7.9E-16 118.9 2.2 71 375-461 200-276 (291)
181 3k32_A Uncharacterized protein 99.1 1.1E-10 3.9E-15 108.5 5.9 144 113-276 7-156 (203)
182 2vup_A Glutathione peroxidase- 99.0 6E-10 2.1E-14 101.9 10.0 91 371-463 47-183 (190)
183 2v1m_A Glutathione peroxidase; 99.0 5E-10 1.7E-14 99.5 9.2 91 371-463 30-165 (169)
184 3dwv_A Glutathione peroxidase- 99.0 7.2E-10 2.5E-14 101.2 10.2 92 371-463 45-181 (187)
185 2p5q_A Glutathione peroxidase 99.0 3.1E-10 1.1E-14 101.0 7.3 90 371-463 31-166 (170)
186 2ggt_A SCO1 protein homolog, m 99.0 5.6E-10 1.9E-14 98.7 8.9 90 371-463 22-159 (164)
187 2rli_A SCO2 protein homolog, m 99.0 9.7E-10 3.3E-14 97.9 10.2 90 371-463 25-162 (171)
188 1kor_A Argininosuccinate synth 99.0 6.2E-10 2.1E-14 113.7 9.7 146 114-278 2-166 (400)
189 1xvw_A Hypothetical protein RV 99.0 5.4E-10 1.8E-14 98.7 8.0 92 371-464 34-159 (160)
190 1wjk_A C330018D20RIK protein; 99.0 5.3E-10 1.8E-14 91.8 7.2 79 371-463 14-94 (100)
191 1hyu_A AHPF, alkyl hydroperoxi 99.0 1.1E-09 3.7E-14 116.1 11.3 96 355-462 102-197 (521)
192 1ni5_A Putative cell cycle pro 99.0 1.4E-09 4.7E-14 112.6 11.5 156 104-277 6-176 (433)
193 3a2k_A TRNA(Ile)-lysidine synt 99.0 2.5E-09 8.4E-14 111.7 13.2 152 113-278 19-188 (464)
194 3cmi_A Peroxiredoxin HYR1; thi 99.0 5.7E-10 1.9E-14 100.1 7.3 90 371-463 31-166 (171)
195 2p31_A CL683, glutathione pero 99.0 3.4E-10 1.2E-14 102.7 5.6 90 371-463 48-179 (181)
196 2k8s_A Thioredoxin; dimer, str 99.0 1.2E-10 4E-15 91.4 1.5 74 375-456 3-77 (80)
197 2bmx_A Alkyl hydroperoxidase C 99.0 1.2E-09 4E-14 100.4 8.4 92 371-463 44-168 (195)
198 3kij_A Probable glutathione pe 98.9 2.3E-09 8E-14 97.0 9.8 45 371-415 37-81 (180)
199 2obi_A PHGPX, GPX-4, phospholi 98.9 1.3E-09 4.3E-14 99.0 8.0 91 371-463 46-182 (183)
200 2k6v_A Putative cytochrome C o 98.9 6.1E-10 2.1E-14 99.2 5.7 90 371-463 34-171 (172)
201 1we0_A Alkyl hydroperoxide red 98.9 1E-09 3.4E-14 100.0 6.8 92 371-463 30-155 (187)
202 1zof_A Alkyl hydroperoxide-red 98.9 8.5E-10 2.9E-14 101.5 6.2 92 371-463 32-159 (198)
203 1ego_A Glutaredoxin; electron 98.9 2.7E-09 9.3E-14 83.9 7.7 74 376-462 3-81 (85)
204 2e7p_A Glutaredoxin; thioredox 98.9 5.6E-10 1.9E-14 93.4 3.8 89 360-463 11-106 (116)
205 1qmv_A Human thioredoxin perox 98.9 2.5E-09 8.7E-14 98.3 8.6 92 371-463 33-161 (197)
206 2f8a_A Glutathione peroxidase 98.9 3.1E-09 1E-13 99.0 8.9 44 371-414 46-89 (208)
207 2pg3_A Queuosine biosynthesis 98.9 8.4E-09 2.9E-13 97.6 11.7 181 113-295 3-204 (232)
208 2gs3_A PHGPX, GPX-4, phospholi 98.9 2.6E-09 9E-14 97.2 7.2 91 371-463 48-184 (185)
209 2hma_A Probable tRNA (5-methyl 98.9 6.7E-09 2.3E-13 105.4 10.7 163 112-276 9-193 (376)
210 1uul_A Tryparedoxin peroxidase 98.8 6.1E-09 2.1E-13 96.2 8.2 92 371-463 35-163 (202)
211 1zye_A Thioredoxin-dependent p 98.8 7E-09 2.4E-13 97.4 8.0 92 371-463 55-183 (220)
212 3gkn_A Bacterioferritin comigr 98.8 2E-08 6.8E-13 88.9 10.4 92 371-463 34-160 (163)
213 1xng_A NH(3)-dependent NAD(+) 98.8 1.7E-08 5.9E-13 97.7 10.8 156 101-276 13-175 (268)
214 2jsy_A Probable thiol peroxida 98.8 2.8E-08 9.5E-13 88.4 11.1 90 371-463 43-165 (167)
215 2h01_A 2-Cys peroxiredoxin; th 98.8 6.6E-09 2.2E-13 95.0 7.0 92 371-463 30-157 (192)
216 2i81_A 2-Cys peroxiredoxin; st 98.8 1.1E-08 3.9E-13 95.5 7.8 92 371-463 51-178 (213)
217 3ztl_A Thioredoxin peroxidase; 98.8 1.8E-08 6E-13 94.7 8.9 92 371-463 68-196 (222)
218 4f9z_D Endoplasmic reticulum r 98.7 1.1E-07 3.8E-12 89.4 14.2 106 352-463 113-223 (227)
219 1xzo_A BSSCO, hypothetical pro 98.7 2.2E-08 7.6E-13 89.2 8.6 92 371-463 32-170 (174)
220 2e18_A NH(3)-dependent NAD(+) 98.7 2.6E-08 9.1E-13 95.7 9.7 149 112-281 22-177 (257)
221 3p52_A NH(3)-dependent NAD(+) 98.7 3.1E-08 1.1E-12 94.8 8.8 156 101-275 14-175 (249)
222 3tqi_A GMP synthase [glutamine 98.7 2.7E-08 9.3E-13 105.3 8.9 167 113-285 231-406 (527)
223 2der_A TRNA-specific 2-thiouri 98.7 3.4E-08 1.2E-12 100.3 8.7 161 112-276 17-201 (380)
224 3fiu_A NH(3)-dependent NAD(+) 98.7 7.7E-08 2.6E-12 92.1 10.5 158 101-275 17-184 (249)
225 3gyk_A 27KDA outer membrane pr 98.6 7.9E-08 2.7E-12 86.2 9.1 82 371-463 21-171 (175)
226 3ixr_A Bacterioferritin comigr 98.6 9.5E-08 3.2E-12 86.4 9.7 107 353-463 35-176 (179)
227 1eej_A Thiol:disulfide interch 98.6 4.1E-08 1.4E-12 91.9 7.3 81 371-463 85-209 (216)
228 2b7k_A SCO1 protein; metalloch 98.6 1E-07 3.5E-12 87.8 9.8 45 371-415 40-88 (200)
229 1xvq_A Thiol peroxidase; thior 98.6 3.9E-08 1.3E-12 88.6 6.5 87 371-461 43-164 (175)
230 2i3y_A Epididymal secretory gl 98.6 1.3E-07 4.6E-12 88.4 10.2 43 371-414 55-97 (215)
231 2a4v_A Peroxiredoxin DOT5; yea 98.6 1.8E-07 6E-12 82.6 10.4 66 372-440 35-128 (159)
232 1t3b_A Thiol:disulfide interch 98.6 9.3E-08 3.2E-12 89.1 8.2 82 371-464 85-210 (211)
233 4g2e_A Peroxiredoxin; redox pr 98.6 3.1E-08 1.1E-12 87.8 4.3 92 371-463 29-156 (157)
234 1h75_A Glutaredoxin-like prote 98.6 6.9E-08 2.4E-12 75.1 5.7 71 376-462 3-75 (81)
235 1gpm_A GMP synthetase, XMP ami 98.5 2.2E-07 7.4E-12 98.4 10.1 166 113-285 228-404 (525)
236 1r7h_A NRDH-redoxin; thioredox 98.5 1.7E-07 5.9E-12 71.5 6.9 69 376-461 3-74 (75)
237 2c0d_A Thioredoxin peroxidase 98.5 1.6E-07 5.6E-12 88.2 8.1 92 371-463 55-182 (221)
238 3hd5_A Thiol:disulfide interch 98.5 3.2E-07 1.1E-11 83.9 9.5 43 371-414 24-66 (195)
239 2l4c_A Endoplasmic reticulum r 98.5 9.6E-07 3.3E-11 75.3 11.5 96 353-462 22-121 (124)
240 3a2v_A Probable peroxiredoxin; 98.5 1.8E-07 6E-12 89.5 7.5 93 371-464 32-161 (249)
241 2r37_A Glutathione peroxidase 98.5 4.8E-07 1.7E-11 84.1 10.0 43 371-414 37-79 (207)
242 2pn8_A Peroxiredoxin-4; thiore 98.5 4.7E-07 1.6E-11 84.3 9.3 92 371-463 47-175 (211)
243 3me7_A Putative uncharacterize 98.4 5.6E-07 1.9E-11 80.6 8.9 92 371-463 27-160 (170)
244 1n8j_A AHPC, alkyl hydroperoxi 98.4 6.5E-07 2.2E-11 81.4 9.2 92 371-463 29-154 (186)
245 4gqc_A Thiol peroxidase, perox 98.4 1.3E-07 4.6E-12 84.4 4.0 98 362-463 26-158 (164)
246 3h93_A Thiol:disulfide interch 98.4 5.8E-07 2E-11 81.9 7.7 42 371-413 24-65 (192)
247 1v58_A Thiol:disulfide interch 98.4 5.7E-07 2E-11 85.5 7.9 86 371-463 96-231 (241)
248 1psq_A Probable thiol peroxida 98.4 1.4E-06 4.9E-11 77.1 9.9 90 371-463 41-163 (163)
249 3qpm_A Peroxiredoxin; oxidored 98.4 1E-06 3.5E-11 83.7 9.3 93 371-464 76-205 (240)
250 2c5s_A THII, probable thiamine 98.3 9.4E-07 3.2E-11 90.7 9.1 144 114-275 189-344 (413)
251 4f9z_D Endoplasmic reticulum r 98.3 1.3E-06 4.5E-11 82.0 8.7 97 352-462 9-109 (227)
252 1kte_A Thioltransferase; redox 98.2 1.3E-06 4.3E-11 71.5 6.2 68 361-440 4-77 (105)
253 2nz2_A Argininosuccinate synth 98.2 9E-07 3.1E-11 90.6 6.2 148 113-277 6-173 (413)
254 1nm3_A Protein HI0572; hybrid, 98.2 2.8E-06 9.6E-11 80.3 9.2 90 371-462 32-164 (241)
255 3uma_A Hypothetical peroxiredo 98.2 2.7E-06 9.3E-11 77.5 8.7 92 371-463 55-184 (184)
256 1k92_A Argininosuccinate synth 98.2 1.3E-06 4.3E-11 90.1 7.1 157 113-286 11-192 (455)
257 1q98_A Thiol peroxidase, TPX; 98.2 1.5E-06 5E-11 77.3 6.2 68 371-441 42-141 (165)
258 3p7x_A Probable thiol peroxida 98.2 3.1E-06 1.1E-10 75.1 8.2 89 371-463 45-166 (166)
259 3tjj_A Peroxiredoxin-4; thiore 98.2 1.5E-06 5.3E-11 83.3 6.7 93 371-464 90-219 (254)
260 2hze_A Glutaredoxin-1; thiored 98.2 1E-06 3.5E-11 73.6 4.4 58 373-440 18-84 (114)
261 2yzh_A Probable thiol peroxida 98.2 4.8E-06 1.6E-10 74.2 8.6 90 371-463 46-170 (171)
262 1prx_A HORF6; peroxiredoxin, h 98.2 1E-05 3.6E-10 75.9 11.2 90 374-464 34-168 (224)
263 4hde_A SCO1/SENC family lipopr 98.1 1.8E-05 6E-10 70.8 11.6 45 371-415 31-78 (170)
264 3zrd_A Thiol peroxidase; oxido 98.1 2.7E-06 9.2E-11 78.4 6.2 67 371-440 77-175 (200)
265 3mng_A Peroxiredoxin-5, mitoch 98.1 4.6E-06 1.6E-10 75.2 7.6 92 371-463 42-173 (173)
266 2klx_A Glutaredoxin; thioredox 98.1 4.7E-06 1.6E-10 66.0 6.2 55 375-440 7-64 (89)
267 1sji_A Calsequestrin 2, calseq 98.1 3.8E-05 1.3E-09 76.7 14.2 109 352-463 226-344 (350)
268 3uow_A GMP synthetase; structu 98.1 1.7E-05 5.8E-10 84.4 11.5 167 112-284 255-434 (556)
269 2v2g_A Peroxiredoxin 6; oxidor 98.0 1.2E-05 4.3E-10 75.9 9.1 91 373-464 30-164 (233)
270 2ht9_A Glutaredoxin-2; thiored 98.0 6.5E-06 2.2E-10 72.1 6.1 66 360-440 40-111 (146)
271 2yan_A Glutaredoxin-3; oxidore 98.0 9.7E-06 3.3E-10 66.5 6.8 65 360-440 8-81 (105)
272 2wfc_A Peroxiredoxin 5, PRDX5; 98.0 8E-06 2.7E-10 73.0 6.7 69 371-440 30-134 (167)
273 2cq9_A GLRX2 protein, glutared 98.0 7.2E-06 2.4E-10 70.2 6.1 67 359-440 17-89 (130)
274 2lqo_A Putative glutaredoxin R 98.0 1.9E-05 6.6E-10 63.4 8.1 74 375-463 5-82 (92)
275 1un2_A DSBA, thiol-disulfide i 98.0 2.1E-06 7.2E-11 79.1 2.7 44 372-416 113-159 (197)
276 2pwj_A Mitochondrial peroxired 98.0 4.9E-06 1.7E-10 74.6 5.0 43 373-415 45-89 (171)
277 1xcc_A 1-Cys peroxiredoxin; un 98.0 9.1E-06 3.1E-10 76.1 7.0 90 374-464 34-165 (220)
278 3c1r_A Glutaredoxin-1; oxidize 98.0 4.6E-06 1.6E-10 70.2 4.5 69 360-440 16-91 (118)
279 2znm_A Thiol:disulfide interch 98.0 1.4E-05 4.8E-10 72.6 7.7 42 371-413 21-62 (195)
280 3qmx_A Glutaredoxin A, glutare 98.0 1.4E-05 4.7E-10 65.1 6.8 60 371-440 13-76 (99)
281 1tp9_A Peroxiredoxin, PRX D (t 98.0 9.5E-06 3.3E-10 71.8 6.3 69 371-440 34-138 (162)
282 3ic4_A Glutaredoxin (GRX-1); s 98.0 9.3E-06 3.2E-10 64.6 5.6 71 375-461 13-91 (92)
283 3us3_A Calsequestrin-1; calciu 97.9 6.8E-05 2.3E-09 75.5 11.7 110 352-463 228-346 (367)
284 3bj5_A Protein disulfide-isome 97.9 0.00015 5.2E-09 63.3 12.2 106 352-463 14-125 (147)
285 1vl2_A Argininosuccinate synth 97.9 2.8E-05 9.5E-10 79.3 8.4 151 110-277 12-182 (421)
286 3nzn_A Glutaredoxin; structura 97.8 4.6E-05 1.6E-09 62.2 7.8 75 373-461 21-102 (103)
287 1z6m_A Conserved hypothetical 97.8 6.8E-05 2.3E-09 66.9 9.6 42 371-413 26-69 (175)
288 1fov_A Glutaredoxin 3, GRX3; a 97.8 3.4E-05 1.2E-09 59.5 6.5 68 376-461 3-73 (82)
289 2vxo_A GMP synthase [glutamine 97.8 5.4E-05 1.9E-09 82.4 10.2 59 113-171 241-302 (697)
290 2ec4_A FAS-associated factor 1 97.8 0.00019 6.3E-09 64.9 12.1 105 357-462 35-165 (178)
291 2rem_A Disulfide oxidoreductas 97.8 0.00013 4.5E-09 65.9 11.1 41 372-413 25-65 (193)
292 3rhb_A ATGRXC5, glutaredoxin-C 97.8 2.1E-05 7E-10 65.3 5.1 66 360-440 10-82 (113)
293 2h8l_A Protein disulfide-isome 97.8 0.00012 4E-09 69.6 11.0 97 352-462 6-110 (252)
294 3gv1_A Disulfide interchange p 97.8 4.4E-05 1.5E-09 66.9 7.3 80 371-463 13-137 (147)
295 2khp_A Glutaredoxin; thioredox 97.8 3.3E-05 1.1E-09 61.3 5.8 55 375-440 7-65 (92)
296 3ec3_A Protein disulfide-isome 97.7 0.00015 5.2E-09 68.9 10.3 98 352-462 6-112 (250)
297 4dvc_A Thiol:disulfide interch 97.7 0.00024 8.3E-09 63.3 10.6 41 371-412 20-60 (184)
298 3n05_A NH(3)-dependent NAD(+) 97.6 8E-05 2.7E-09 79.8 7.7 154 101-273 314-473 (590)
299 3msz_A Glutaredoxin 1; alpha-b 97.6 0.00018 6.1E-09 56.2 7.5 74 374-463 4-85 (89)
300 2r2j_A Thioredoxin domain-cont 97.6 0.00039 1.3E-08 70.2 12.0 104 352-463 219-327 (382)
301 1wik_A Thioredoxin-like protei 97.5 0.0002 6.7E-09 59.1 6.8 67 359-440 5-79 (109)
302 3dpi_A NAD+ synthetase; ssgcid 97.5 0.00019 6.6E-09 69.5 7.7 161 101-275 34-211 (285)
303 3sbc_A Peroxiredoxin TSA1; alp 97.5 0.00022 7.6E-09 66.3 7.7 93 371-464 51-180 (216)
304 3q4g_A NH(3)-dependent NAD(+) 97.5 0.00014 4.9E-09 70.3 6.7 159 101-275 28-211 (279)
305 3ctg_A Glutaredoxin-2; reduced 97.5 9.3E-05 3.2E-09 63.2 4.7 70 359-440 27-103 (129)
306 1kqp_A NAD+ synthase, NH(3)-de 97.5 0.00018 6.2E-09 69.4 7.2 156 101-276 26-200 (271)
307 3keb_A Probable thiol peroxida 97.5 0.00036 1.2E-08 65.4 8.9 87 371-463 47-174 (224)
308 3hz8_A Thiol:disulfide interch 97.4 0.00015 5E-09 66.2 5.8 43 371-414 23-65 (193)
309 3h8q_A Thioredoxin reductase 3 97.4 0.00018 6.2E-09 59.8 5.5 66 360-440 8-79 (114)
310 1wxi_A NH(3)-dependent NAD(+) 97.3 0.001 3.5E-08 64.2 10.4 155 101-275 27-202 (275)
311 4f82_A Thioredoxin reductase; 97.1 0.00092 3.1E-08 60.2 7.6 99 361-463 40-174 (176)
312 3rjz_A N-type ATP pyrophosphat 97.1 0.00091 3.1E-08 63.0 7.7 123 114-271 6-137 (237)
313 2h8l_A Protein disulfide-isome 97.1 0.0021 7.3E-08 60.8 10.3 102 353-463 115-228 (252)
314 3l9v_A Putative thiol-disulfid 97.1 0.0002 7E-09 65.0 3.0 43 372-415 14-59 (189)
315 3tue_A Tryparedoxin peroxidase 96.9 0.0044 1.5E-07 57.7 10.3 93 371-464 55-184 (219)
316 3ec3_A Protein disulfide-isome 96.9 0.0095 3.2E-07 56.3 12.7 102 353-463 117-226 (250)
317 4eo3_A Bacterioferritin comigr 96.8 0.003 1E-07 62.3 8.7 88 371-463 23-137 (322)
318 2wci_A Glutaredoxin-4; redox-a 96.7 0.0016 5.4E-08 56.0 5.2 67 360-440 26-99 (135)
319 3l4n_A Monothiol glutaredoxin- 96.7 0.0016 5.3E-08 55.4 4.6 69 360-440 5-79 (127)
320 3feu_A Putative lipoprotein; a 96.6 0.001 3.4E-08 60.2 3.6 39 372-413 22-60 (185)
321 1vbk_A Hypothetical protein PH 96.6 0.0038 1.3E-07 61.2 7.7 117 114-274 181-307 (307)
322 3ipz_A Monothiol glutaredoxin- 96.5 0.0043 1.5E-07 50.9 6.1 59 372-440 17-82 (109)
323 3gha_A Disulfide bond formatio 96.4 0.028 9.5E-07 51.3 11.7 43 371-413 28-72 (202)
324 3ed3_A Protein disulfide-isome 96.4 0.016 5.6E-07 56.3 10.7 100 353-461 144-263 (298)
325 3ilv_A Glutamine-dependent NAD 96.4 0.013 4.6E-07 63.0 10.8 64 108-171 298-404 (634)
326 3sdb_A Glutamine-dependent NAD 96.3 0.0089 3E-07 64.9 8.9 69 102-170 350-427 (680)
327 3f4s_A Alpha-DSBA1, putative u 96.3 0.028 9.6E-07 52.4 11.1 42 371-412 38-81 (226)
328 1aba_A Glutaredoxin; electron 96.2 0.0074 2.5E-07 47.1 5.9 56 376-440 2-74 (87)
329 2wem_A Glutaredoxin-related pr 96.2 0.0081 2.8E-07 50.2 6.2 67 360-440 11-85 (118)
330 3gx8_A Monothiol glutaredoxin- 96.1 0.011 3.9E-07 49.5 6.8 66 361-440 8-83 (121)
331 1nm3_A Protein HI0572; hybrid, 96.1 0.011 3.9E-07 55.2 7.3 58 373-440 169-228 (241)
332 2ct6_A SH3 domain-binding glut 96.0 0.012 4.1E-07 48.4 6.6 55 375-440 9-81 (111)
333 3zyw_A Glutaredoxin-3; metal b 96.0 0.0082 2.8E-07 49.5 5.4 58 372-440 15-80 (111)
334 1t1v_A SH3BGRL3, SH3 domain-bi 96.0 0.011 3.8E-07 46.8 5.9 54 376-440 4-69 (93)
335 2axo_A Hypothetical protein AT 96.0 0.047 1.6E-06 52.2 11.3 80 372-462 42-140 (270)
336 3q6o_A Sulfhydryl oxidase 1; p 95.9 0.048 1.7E-06 50.8 11.1 98 354-463 140-238 (244)
337 3l9s_A Thiol:disulfide interch 95.8 0.0066 2.3E-07 55.0 4.3 41 372-413 21-64 (191)
338 1q15_A CARA; CMPR, (2S,5S)-5-c 95.2 0.021 7.3E-07 59.7 6.2 107 113-226 239-351 (503)
339 1xiy_A Peroxiredoxin, pfaop; a 95.0 0.035 1.2E-06 50.0 6.3 92 371-463 42-180 (182)
340 3c7m_A Thiol:disulfide interch 94.3 0.069 2.3E-06 47.6 6.4 41 372-413 17-58 (195)
341 3t58_A Sulfhydryl oxidase 1; o 94.3 0.14 4.8E-06 53.7 9.6 98 354-463 140-238 (519)
342 1ct9_A Asparagine synthetase B 94.2 0.27 9.4E-06 51.9 11.7 107 113-226 227-354 (553)
343 1jgt_A Beta-lactam synthetase; 93.9 0.092 3.1E-06 55.0 7.2 119 101-226 227-354 (513)
344 4f4h_A Glutamine dependent NAD 93.5 0.29 1E-05 51.8 10.3 66 105-170 292-361 (565)
345 1u6t_A SH3 domain-binding glut 93.4 0.13 4.6E-06 42.9 6.0 52 375-434 1-69 (121)
346 2wul_A Glutaredoxin related pr 92.4 0.21 7.3E-06 41.5 5.9 68 359-440 10-85 (118)
347 3kzq_A Putative uncharacterize 92.3 1.1 3.7E-05 40.4 11.1 29 375-403 4-32 (208)
348 2xhf_A Peroxiredoxin 5; oxidor 92.2 0.091 3.1E-06 46.7 3.6 45 371-415 41-87 (171)
349 2kok_A Arsenate reductase; bru 90.6 0.55 1.9E-05 38.8 6.6 34 376-416 7-40 (120)
350 2jad_A Yellow fluorescent prot 89.0 0.18 6.2E-06 50.1 2.7 60 376-440 263-327 (362)
351 3gn3_A Putative protein-disulf 88.7 0.61 2.1E-05 41.6 5.8 41 371-412 13-54 (182)
352 3bci_A Disulfide bond protein 88.3 0.88 3E-05 40.1 6.6 42 371-412 10-53 (186)
353 3tdg_A DSBG, putative uncharac 86.4 0.52 1.8E-05 45.0 4.0 30 371-400 146-175 (273)
354 3gmf_A Protein-disulfide isome 85.9 1.5 5.2E-05 39.7 6.9 43 371-413 14-58 (205)
355 2x8g_A Thioredoxin glutathione 85.8 0.63 2.1E-05 49.3 4.8 67 360-440 9-80 (598)
356 1t4y_A Adaptive-response senso 85.6 10 0.00034 30.5 10.5 82 375-461 13-95 (105)
357 2in3_A Hypothetical protein; D 83.8 1.2 4E-05 40.2 5.1 43 418-463 166-208 (216)
358 1z3e_A Regulatory protein SPX; 81.5 1.5 5.1E-05 36.8 4.5 34 376-416 3-36 (132)
359 3l78_A Regulatory protein SPX; 77.3 2.5 8.5E-05 34.8 4.5 34 376-416 2-35 (120)
360 1rw1_A Conserved hypothetical 74.1 2.7 9.1E-05 34.2 3.8 34 376-416 2-35 (114)
361 2g2q_A Glutaredoxin-2; thiored 73.8 5.1 0.00017 32.8 5.2 36 373-413 2-37 (124)
362 3fz4_A Putative arsenate reduc 72.6 4.7 0.00016 33.2 5.0 34 376-416 5-38 (120)
363 3bci_A Disulfide bond protein 66.1 5.8 0.0002 34.6 4.5 38 418-463 139-176 (186)
364 3feu_A Putative lipoprotein; a 65.8 5.2 0.00018 35.3 4.1 41 418-463 142-182 (185)
365 3gkx_A Putative ARSC family re 63.9 5 0.00017 33.0 3.3 34 376-416 6-39 (120)
366 1hyu_A AHPF, alkyl hydroperoxi 59.1 25 0.00085 36.2 8.5 78 371-463 17-94 (521)
367 1s3c_A Arsenate reductase; ARS 57.1 5.8 0.0002 33.7 2.6 77 376-461 4-86 (141)
368 3c7m_A Thiol:disulfide interch 56.0 5.4 0.00018 34.8 2.4 41 418-463 152-192 (195)
369 3rdw_A Putative arsenate reduc 55.6 5.3 0.00018 32.9 2.1 34 376-416 7-40 (121)
370 2in3_A Hypothetical protein; D 54.7 20 0.00068 31.7 6.1 39 373-412 7-45 (216)
371 3hz8_A Thiol:disulfide interch 54.2 14 0.00046 32.7 4.8 38 418-463 144-181 (193)
372 3ktb_A Arsenical resistance op 53.0 33 0.0011 27.6 6.3 55 401-461 39-102 (106)
373 3gn3_A Putative protein-disulf 51.1 12 0.00042 32.9 3.9 37 418-460 144-181 (182)
374 1wwj_A Circadian clock protein 49.2 5.1 0.00017 32.3 0.9 60 373-434 7-66 (105)
375 3gmf_A Protein-disulfide isome 45.6 13 0.00045 33.3 3.3 34 423-463 162-195 (205)
376 3kgk_A Arsenical resistance op 44.5 25 0.00086 28.5 4.4 52 404-461 39-99 (110)
377 3l9v_A Putative thiol-disulfid 43.4 22 0.00074 31.2 4.3 20 418-440 135-154 (189)
378 3gl5_A Putative DSBA oxidoredu 43.1 26 0.00088 32.1 4.9 39 418-463 173-211 (239)
379 3lyk_A Stringent starvation pr 42.1 71 0.0024 27.9 7.7 59 374-440 5-63 (216)
380 3f0i_A Arsenate reductase; str 41.2 15 0.00051 30.0 2.6 33 376-415 6-38 (119)
381 2imf_A HCCA isomerase, 2-hydro 40.2 16 0.00055 32.3 2.9 38 418-463 157-194 (203)
382 2d8c_A Phosphatidylcholine:cer 38.7 13 0.00046 29.3 1.9 22 254-275 14-35 (97)
383 1un2_A DSBA, thiol-disulfide i 38.0 19 0.00064 32.1 3.0 20 418-440 40-59 (197)
384 2gle_A Neurabin-1; SAM domain, 35.1 7.6 0.00026 28.7 -0.1 21 255-275 2-22 (74)
385 3l9s_A Thiol:disulfide interch 34.9 28 0.00096 30.6 3.6 20 418-440 141-160 (191)
386 4dej_A Glutathione S-transfera 34.4 1E+02 0.0035 27.4 7.6 61 372-440 9-70 (231)
387 1k0m_A CLIC1, NCC27, chloride 33.6 1.3E+02 0.0044 26.9 8.2 49 383-439 23-71 (241)
388 3bs7_A Protein aveugle; sterIl 33.5 13 0.00044 27.7 1.0 18 255-272 1-18 (78)
389 2r4v_A XAP121, chloride intrac 32.1 1.2E+02 0.004 27.3 7.6 67 380-462 26-92 (247)
390 1yy7_A SSPA, stringent starvat 31.3 1.5E+02 0.0051 25.6 8.0 54 375-434 10-63 (213)
391 1kw4_A Polyhomeotic; SAM domai 29.9 24 0.00082 27.3 2.0 20 255-274 12-32 (89)
392 3bq7_A Diacylglycerol kinase d 29.6 26 0.00089 26.4 2.1 22 254-275 4-25 (81)
393 2ahe_A Chloride intracellular 29.2 1.9E+02 0.0065 26.4 8.6 67 380-462 31-97 (267)
394 2yci_X 5-methyltetrahydrofolat 27.3 1.5E+02 0.0051 27.7 7.5 67 100-166 87-162 (271)
395 2imf_A HCCA isomerase, 2-hydro 27.0 75 0.0026 27.8 5.1 28 375-402 2-29 (203)
396 3lyp_A Stringent starvation pr 26.7 1.7E+02 0.0058 25.3 7.5 57 376-440 9-65 (215)
397 4f03_A Glutathione transferase 26.7 81 0.0028 28.0 5.4 30 381-415 19-48 (253)
398 3fz5_A Possible 2-hydroxychrom 26.3 42 0.0014 29.6 3.3 37 418-462 163-199 (202)
399 4hoj_A REGF protein; GST, glut 25.7 1.4E+02 0.0047 25.8 6.7 56 377-440 5-60 (210)
400 1s3a_A NADH-ubiquinone oxidore 25.4 2.2E+02 0.0074 22.2 7.0 74 375-463 21-97 (102)
401 1v85_A Similar to ring finger 24.4 30 0.001 26.7 1.6 22 253-274 13-34 (91)
402 1z9h_A Membrane-associated pro 23.2 1.2E+02 0.004 28.1 5.9 52 374-435 13-66 (290)
403 3ir4_A Glutaredoxin 2; glutath 23.2 64 0.0022 28.2 3.9 52 376-434 4-55 (218)
404 3lxz_A Glutathione S-transfera 22.7 2.1E+02 0.0073 24.8 7.4 53 376-435 3-55 (229)
405 2e8o_A SAM domain and HD domai 22.4 36 0.0012 26.9 1.7 22 254-275 24-45 (103)
406 3vln_A GSTO-1, glutathione S-t 22.3 1.9E+02 0.0064 25.5 7.0 55 375-435 23-77 (241)
407 1f6y_A 5-methyltetrahydrofolat 22.2 2.1E+02 0.0071 26.5 7.4 66 101-166 79-153 (262)
408 3rpp_A Glutathione S-transfera 22.0 71 0.0024 28.9 4.0 41 418-462 172-212 (234)
409 1gwc_A Glutathione S-transfera 21.9 1.6E+02 0.0054 25.7 6.4 54 375-434 6-60 (230)
410 1r4w_A Glutathione S-transfera 21.7 90 0.0031 27.8 4.6 40 417-460 171-210 (226)
411 3bs5_B Connector enhancer of k 21.0 46 0.0016 24.7 2.0 19 255-273 2-20 (80)
412 3hzh_A Chemotaxis response reg 20.2 2.9E+02 0.0099 22.1 7.3 71 101-173 49-120 (157)
No 1
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.1e-60 Score=464.05 Aligned_cols=239 Identities=52% Similarity=1.046 Sum_probs=200.4
Q ss_pred ChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHH
Q 012424 84 GEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKH 162 (464)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~eil~~a~~~~~~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~ 162 (464)
+..+++.+|++|+.++++++|+++++.|+++|+|+|| ||||++| ||+.+.+.+++|+|+|||.+||||++|+++++++
T Consensus 26 ~~~~~~~~~~~~~~~~a~~~l~~a~~~~g~~i~Va~S-GkDS~vLL~Ll~~~~~~i~vv~iDtg~~~~et~~~v~~~~~~ 104 (275)
T 2goy_A 26 QPFDLPALASSLADKSPQDILKAAFEHFGDELWISFS-GAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVREH 104 (275)
T ss_dssp --CCHHHHHHHHTTSCHHHHHHHHHHHHSTTEEEECC-SSTTHHHHHHHHHHCTTCCEEEECCSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCHHHHHHHHHHHcCCCEEEEee-cHHHHHHHHHHHHhCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4568899999999999999999999999777999999 9998766 9999999999999999999999999999999999
Q ss_pred hCCcEEEEcCChHHHHHHHHhcCCCCCCCcchhhhhhccccchHHHHhccCcEEEEeeeccCCcccccCCceeecCCCCc
Q 012424 163 FGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQVDPVFE 242 (464)
Q Consensus 163 ~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~ 242 (464)
||++++++.|+...+...+...|.+.++..+..+||.++|++|++++++++++|++|+|++|++..|+.++.++.+..+.
T Consensus 105 ~gi~l~v~~~~~~~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~r~l~~~~~~itG~r~dds~~~R~~~~~~~~d~~~~ 184 (275)
T 2goy_A 105 YGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSPGTRSQVAVLEIDGAFS 184 (275)
T ss_dssp HTCCCEEECCCHHHHHHHHHHHCSCHHHHHCTHHHHHHHTHHHHHHHHHTCSEEECCCCGGGTTSCSCCCCSEEECTTTC
T ss_pred HCCeEEEEeCCccCHHHHHHHhCCCCccccCHHHHHHHHHHHHHHHHHHhcCchhcCchhhhhhhhhhhCcccccccccc
Confidence 99999999998655566667777766666667899999999999999999999999999999932899999998875322
Q ss_pred CccCCCCCeEEEEeCccCcHHHHHHHHHhcCCCcchhhhcCCcccCccCCCccCCCCCccccccccccCCCccccccccc
Q 012424 243 GLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKG 322 (464)
Q Consensus 243 ~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~CT~~~~~g~~~r~GRw~~~~~~~~ecg~~~~ 322 (464)
. ..+++++++||++|+.+|||.|++.++|||||||++||+||||++||+|+.+|+++|+|||||++..|+|||||.+
T Consensus 185 -~--~~~g~~~i~PL~~wt~~dV~~Yi~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~R~gRw~w~~~~k~ecGlh~~ 261 (275)
T 2goy_A 185 -T--PEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAG 261 (275)
T ss_dssp -C--SSSCCEEECTTTTCCHHHHHHHHHHTTCCCCGGGGGTCSSCCCGGGBCCCCTTCCGGGGBSTTC------------
T ss_pred -c--CCCCeEEEechHhCCHHHHHHHHHHhCCCCChHHHcCCCCCCCccCCCCCCCCCccccCccccCCCCCccCCCCcC
Confidence 0 1246899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Cccc
Q 012424 323 NIKQ 326 (464)
Q Consensus 323 ~~~~ 326 (464)
++..
T Consensus 262 ~~~~ 265 (275)
T 2goy_A 262 NLIS 265 (275)
T ss_dssp ----
T ss_pred cchh
Confidence 8754
No 2
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-56 Score=431.12 Aligned_cols=225 Identities=27% Similarity=0.450 Sum_probs=195.3
Q ss_pred hhhHHHHHHHhccC-CHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHcCC---CeEEEEEeCCCCcHHHHHHHHHH
Q 012424 85 EEDFEQFAKELENA-SPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGR---PFRVFSLDTGRLNPETYRFFDEV 159 (464)
Q Consensus 85 ~~~~~~l~~~l~~~-~~~eil~~a~~~~~~~i~vafSGGKDS~ll-~L~~~~~~---~i~vv~~DTg~~fpeT~~~~~~~ 159 (464)
..+++.+|++|+.+ +++++|+|+++.|+ +++|+|||||||++| ||+.+..+ +++|+|+|||++||||++|++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~v~va~SGGkDS~vLL~ll~~~~~~~~~i~vv~iDtg~~~~et~~~v~~~ 92 (261)
T 2oq2_A 14 QEQLDHWNEQLIKLETPQEIIAWSIVTFP-HLFQTTAFGLTGLVTIDMLSKLSEKYYMPELLFIDTLHHFPQTLTLKNEI 92 (261)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHCS-SEEEECCCCHHHHHHHHHHHHHTTTSCCCEEEEECCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCHHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhCccCCCeeEEEecCCCCCHHHHHHHHHH
Confidence 34788999999999 99999999999997 499999999999766 99998876 89999999999999999999999
Q ss_pred HHHhCC----cEEEEcCChH-HHHHHHHhcCCCCCCCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCcccccCC
Q 012424 160 EKHFGI----RIEYMFPDAV-EVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEI 232 (464)
Q Consensus 160 ~~~~gl----~i~~~~p~~~-~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~ 232 (464)
+++||+ +++++.|+.. .+..+...+|.. ++..+..+||.++|++||+++++ +.++|++|+|++|+. +|+.+
T Consensus 93 ~~~~gl~~~~~l~v~~~~~~~~~~~~~~~~G~~-~~~~~~~~cc~~~K~~pl~~~l~~~g~~~~~tG~R~dds~-~R~~~ 170 (261)
T 2oq2_A 93 EKKYYQPKNQTIHVYKPDGCESEADFASKYGDF-LWEKDDDKYDYLAKVEPAHRAYKELHISAVFTGRRKSQGS-ARSQL 170 (261)
T ss_dssp HHHHTGGGTCCCEEECSTTCSSHHHHHHHHCTT-HHHHCHHHHHHHHTHHHHHHHHHHTTCSEEECCCCGGGCG-GGGGC
T ss_pred HHHhCCCCCCCeEEEecCCccCHHHHHHHhCCC-ccccChHHHHHHHhHHHHHHHHHHcCCCEEEEeccccchH-HHccC
Confidence 999999 9999998741 234445555643 33445689999999999999999 556999999999996 99999
Q ss_pred ceeecCCCCcCccCCCCCeEEEEeCccCcHHHHHHHHHhcCCCcchhhhcCCcccCccCCCccCCCCCccccccccccCC
Q 012424 233 PVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDA 312 (464)
Q Consensus 233 ~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~CT~~~~~g~~~r~GRw~~~~~ 312 (464)
+.+++++. +++++++||++||.+|||+|++.++|||||||++||+||||++||+++.+|++||+||| ++.
T Consensus 171 ~~~~~~~~--------~~~~ki~PL~~wt~~dV~~Yi~~~~lp~~pLy~~Gy~siGC~~ct~~~~~~~~eR~gRw--~~~ 240 (261)
T 2oq2_A 171 SIIEIDEL--------NGILKINPLINWTFEQVKQYIDANNVPYNELLDLGYRSIGDYHSTQPVKEGEDERAGRW--KGK 240 (261)
T ss_dssp CSEEEETT--------TTEEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCBGGGCCCCCTTSCTTTTTC-----
T ss_pred CceeecCC--------CCeEEEechHhCCHHHHHHHHHHcCCCCCchhhCCCCCCCCcCCCCcCCCCCCcccccc--CCC
Confidence 99887742 46899999999999999999999999999999999999999999999999999999997 677
Q ss_pred Cccccccccc
Q 012424 313 KAKECGLHKG 322 (464)
Q Consensus 313 ~~~ecg~~~~ 322 (464)
.|+|||||..
T Consensus 241 ~k~ecGlh~~ 250 (261)
T 2oq2_A 241 AKTECGIHEA 250 (261)
T ss_dssp --CCCTTTCC
T ss_pred CCcccCCCCC
Confidence 8999999963
No 3
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=100.00 E-value=1e-54 Score=421.18 Aligned_cols=226 Identities=27% Similarity=0.431 Sum_probs=184.8
Q ss_pred ChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHH
Q 012424 84 GEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKH 162 (464)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~eil~~a~~~~~~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~ 162 (464)
...+++.+|.+|+.++++++|+|+++.|+++++|+|||||||++| ||+.+..+++.|+|+|||.+||||++|+++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~v~va~SGG~DS~vLL~ll~~~~~~v~vv~idtg~~~~et~~~~~~~~~~ 96 (252)
T 2o8v_A 17 RILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDK 96 (252)
T ss_dssp HHHHTHHHHHHHTTSCHHHHHHHHHTTSCSCEEEECCCSTTHHHHHHHHHHHSTTCEEEECCCSCBCHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHhcCCCHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHHHHHHHHHH
Confidence 456788999999999999999999999987899999999999766 9999988999999999999999999999999999
Q ss_pred hCCcEEEEcCChHHHHHHHHhcCCCCCCC--cchhhhhhccccchHHHHhccCc--EEEEeeeccCCcccccCCceeecC
Q 012424 163 FGIRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVD 238 (464)
Q Consensus 163 ~gl~i~~~~p~~~~~~~~~~~~g~~~~~~--~~~~~Cc~~~Kv~Pl~r~l~~~~--~~itG~R~~ES~~~R~~~~~~~~d 238 (464)
||++++++.|+.. ...+....| ..+.. ....+||.++|++||+++++++. +|++|+|++|+. .|+.++.++..
T Consensus 97 ~gi~~~v~~~~~~-~~~~~~~~g-~~~~~~~~~~~~cc~~~K~~pl~~~l~~~~~~~~~tG~r~dds~-~R~~l~~~~~~ 173 (252)
T 2o8v_A 97 LKLNLKVYRATES-AAWQEARYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAIQ 173 (252)
T ss_dssp TTCEEEECCCSSC-HHHHHHHTC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTCSEEEECCCSTTTT-CCTTSCSEEES
T ss_pred hCCceEEEcCCCC-HHHHHHHcC-CccccCCchHHHHHHHHHHHHHHHHHHhcCCcEEEEeccccccc-ccccCceeecC
Confidence 9999999988754 344455566 32222 13468999999999999999765 699999999996 89999887532
Q ss_pred CCCcCccCCCCCeEEEEeCccCcHHHHHHHHHhcCCCcchhhhcCCcccCccCCCccCCCCCccccccccccCCCccccc
Q 012424 239 PVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECG 318 (464)
Q Consensus 239 ~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~CT~~~~~g~~~r~GRw~~~~~~~~ecg 318 (464)
++..+++||++|+.+|||.|++.++|||||||++||+||||++||+++.+|+|+|+||| .+ .|+|||
T Consensus 174 ----------~~~~~i~PL~~wt~~dV~~y~~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~r~gRw--~~-~k~ecg 240 (252)
T 2o8v_A 174 ----------RGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRF--FG-LKRECG 240 (252)
T ss_dssp ----------SSSEEECGGGSCCHHHHHHHHHHTTCCCCTTTTTTCSSCCBCTTTCC-----------------CCSCCC
T ss_pred ----------CCeEEEechhhCCHHHHHHHHHHcCCCCChHHhCCCCCCCCcCcCCcCCCCCCcccccc--CC-CCccCC
Confidence 25789999999999999999999999999999999999999999999999999999997 55 899999
Q ss_pred ccccCcc
Q 012424 319 LHKGNIK 325 (464)
Q Consensus 319 ~~~~~~~ 325 (464)
||.++..
T Consensus 241 lh~~~~~ 247 (252)
T 2o8v_A 241 LHEGLEH 247 (252)
T ss_dssp SCCC---
T ss_pred CCCCccc
Confidence 9986543
No 4
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=100.00 E-value=1.1e-44 Score=353.96 Aligned_cols=181 Identities=17% Similarity=0.253 Sum_probs=153.9
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHcC---CcEEEEechhHHHHHH-HHHHHc----------------------CCCeEE
Q 012424 87 DFEQFAKELENASPLEIMDRALEKFG---NDIAIAFSGAEDVALI-EYAHLT----------------------GRPFRV 140 (464)
Q Consensus 87 ~~~~l~~~l~~~~~~eil~~a~~~~~---~~i~vafSGGKDS~ll-~L~~~~----------------------~~~i~v 140 (464)
-+..+..+++. +..++|++++++|+ ++++++|||||||+|| ||+.+. .++++|
T Consensus 31 ~~~~~q~qir~-S~~~iLrea~~~f~~~~~~ialSfSGGKDStVLLhL~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipv 109 (308)
T 3fwk_A 31 IIAQTQRAINT-TKSILINETFPKWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPT 109 (308)
T ss_dssp HHHHHHHHHHH-HHHHHHHHTTTTSCSSSSSEEEECCSSHHHHHHHHHHHHHHHHHHTCCE-----------------EE
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHcccccCCEEEEecCChhHHHHHHHHHHHhhhhcccccccccccccccccCCCCccE
Confidence 46777777765 33469999999998 5799999999999766 888764 157999
Q ss_pred EEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCCcchhhhhhccccchHHHHhccCcEEEEee
Q 012424 141 FSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQ 220 (464)
Q Consensus 141 v~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~ 220 (464)
||+|||++||||++|+++++++||++|+++.|+...- ...+||.++|++| ++++||+|+
T Consensus 110 ifiDTG~~FpET~ef~d~~~~~ygL~L~v~~p~~~~~---------------~~~~cc~~~K~~P------~~~AwitG~ 168 (308)
T 3fwk_A 110 VFIDHDDTFKTLENFIEETSLRYSLSLYESDRDKCET---------------MAEAFETFLQVFP------ETKAIVIGI 168 (308)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHTTEEEEECCTTSCCC---------------HHHHHHHHHHHCT------TCCEEECCC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCcEEEeCCCCCHH---------------HHHHHHHHHHhCC------CCCEEEEEe
Confidence 9999999999999999999999999999998873210 2358999999999 488999999
Q ss_pred eccCCcccccCCceeecCCCCcCccCCCCCeEEEEeCccCcHHHHHHHHHhcCCCcchhhhcCCcccCccCCCccCC
Q 012424 221 RKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVL 297 (464)
Q Consensus 221 R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~CT~~~~ 297 (464)
||+| + .|+++++++.+. .+|++++|++||++||+.|||.||+.++|||||||++||+||||++||+|..
T Consensus 169 RR~e-~-~Ra~l~~~e~~d------~~w~~~iKVnPL~dWT~~DVW~YI~~~~LPynpLYd~GY~SIGC~~CT~pnp 237 (308)
T 3fwk_A 169 RHTD-P-FGEHLKPIQKTD------ANWPDFYRLQPLLHWNLANIWSFLLYSNEPICELYRYGFTSLGNVEETLPNP 237 (308)
T ss_dssp CTTS-T-TCTTCCSEEECC------TTSCSCEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCCTTTBCCCG
T ss_pred ecCC-c-ccCCCCeeeccC------CCCCCeEEEechhhCCHHHHHHHHHHcCCCCCcHHhcCCCCCCCCccCCCCh
Confidence 9996 5 899999988653 1456899999999999999999999999999999999999999999999863
No 5
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=100.00 E-value=4.1e-41 Score=336.38 Aligned_cols=207 Identities=26% Similarity=0.435 Sum_probs=140.9
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHc----CCCeEEEEEeCCCCcHHHHHHHHHHHH
Q 012424 87 DFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLT----GRPFRVFSLDTGRLNPETYRFFDEVEK 161 (464)
Q Consensus 87 ~~~~l~~~l~~~~~~eil~~a~~~~~~~i~vafSGGKDS~ll-~L~~~~----~~~i~vv~~DTg~~fpeT~~~~~~~~~ 161 (464)
.++.+.. +++++|+++++.|++ ++|+|||||||++| ||+.+. +.+++++|+|||.+||||++|++++++
T Consensus 27 ~L~~le~-----~a~~ilr~~~~~~~~-ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vDtg~~~~et~~~v~~~~~ 100 (325)
T 1zun_A 27 HLKQLEA-----ESIHIIREVAAEFDN-PVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQMVE 100 (325)
T ss_dssp HHHHHHH-----HHHHHHHHHHHHCSS-EEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHH-----HHHHHHHHHHHhCCC-EEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEECCCCCHHHHHHHHHHHH
Confidence 4555533 489999999999974 99999999999766 888885 568999999999999999999999999
Q ss_pred HhCCcEEEEcCChHHHHHHHHhcCCCCCCCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCcccccCCceee---
Q 012424 162 HFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQ--- 236 (464)
Q Consensus 162 ~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~--- 236 (464)
+||++++++.++.. ...|.+.+ ..+..+||.++|++||+++++ ++++|++|+|+||+. +|+.+++++
T Consensus 101 ~~gi~l~v~~~~~~------~~~G~~~~-~~~~~~cc~~~K~~pL~~~l~e~g~~~i~tG~R~Des~-~Ra~~~~~~~r~ 172 (325)
T 1zun_A 101 EMGLDLITHINPDG------VAQGINPF-THGSAKHTDIMKTEGLKQALDKHGFDAAFGGARRDEEK-SRAKERVYSFRD 172 (325)
T ss_dssp TTTCCEEEECC---------------------CCHHHHHHTHHHHHHHHHHHTCSEEECCCCTTSSG-GGGGCCSEEEEC
T ss_pred HcCCCEEEEeCchH------HhcCCCcc-ccChHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhh-hhhcccceeccc
Confidence 99999999987643 12343322 234568999999999999998 678999999999996 999988876
Q ss_pred ----cCCCCc-----Cc---cCCCCCeEEEEeCccCcHHHHHHHHHhcCCCcchhh-------------------hcC--
Q 012424 237 ----VDPVFE-----GL---EGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLH-------------------SQG-- 283 (464)
Q Consensus 237 ----~d~~~~-----~~---~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy-------------------~~G-- 283 (464)
+++... .. ....++.++++||++||+.|||+|++.++||||||| ++|
T Consensus 173 ~~~~~d~~~~rp~l~~~~n~~~~~g~~~~i~PLl~wt~~dIw~Yi~~~~lp~~~LY~~~~r~~~~r~g~~~~~~~~~g~~ 252 (325)
T 1zun_A 173 SKHRWDPKNQRPELWNVYNGNVNKGESIRVFPLSNWTELDIWQYIYLEGIPIVPLYFAAERDVIEKNGTLIMIDDERILE 252 (325)
T ss_dssp TTCCBCGGGCCCCCSSCCCCCCCTTCEEEECTTTTCCHHHHHHHHHHHTCCCCSCCSCC---------------------
T ss_pred cccccCccccCcchhhhccccccCCCeEEEEchhhCCHHHHHHHHHHhCCCcchhhhcccccccccCCceeccchhhccc
Confidence 332110 00 001134889999999999999999999999999999 699
Q ss_pred ----------------CcccCccCCCccCCCCC---------------ccccccc
Q 012424 284 ----------------YISIGCEPCTRPVLPGQ---------------HEREGRW 307 (464)
Q Consensus 284 ----------------y~siGC~~CT~~~~~g~---------------~~r~GRw 307 (464)
|+||||+|||+|+.+++ .||+|||
T Consensus 253 ~~~~~~~~~~~~~~~ry~siGc~~cT~~v~~~~~~~~~~~~~~~~~~~~er~~R~ 307 (325)
T 1zun_A 253 HLTDEEKSRIVKKKVRFRTLGCYPLTGAVESEATSLTDIIQEMLLTRTSERQGRV 307 (325)
T ss_dssp -------------------------------------------------------
T ss_pred ccCCCccccccccccccCCcCCcccCCccCCCCccHHHHHHHHHhcCCCcccccc
Confidence 99999999999998774 4899997
No 6
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=100.00 E-value=1.9e-38 Score=299.96 Aligned_cols=194 Identities=25% Similarity=0.414 Sum_probs=168.8
Q ss_pred ChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHH
Q 012424 84 GEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKH 162 (464)
Q Consensus 84 ~~~~~~~l~~~l~~~~~~eil~~a~~~~~~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~ 162 (464)
...+++.+|.+|+.++++++|+++++.|+++|+|+|||||||++| ||+.+.+.++.++|+|||.++|+|++|+++++++
T Consensus 16 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~v~Va~SGGkDS~vLL~ll~~~~~~v~~v~vd~g~~~~e~~~~v~~~~~~ 95 (215)
T 1sur_A 16 RILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDK 95 (215)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHCCSEEEEECCCCTTHHHHHHHHHHHSTTCEEEEEECSCBCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhccCCHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Confidence 456889999999999999999999999987899999999999766 9999988899999999999999999999999999
Q ss_pred hCCcEEEEcCChHHHHHHHHhcCCCCCCCc---chhhhhhccccchHHHHhccCc--EEEEeeeccCCcccccCCceeec
Q 012424 163 FGIRIEYMFPDAVEVQALVRSKGLFSFYED---GHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQV 237 (464)
Q Consensus 163 ~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~---~~~~Cc~~~Kv~Pl~r~l~~~~--~~itG~R~~ES~~~R~~~~~~~~ 237 (464)
||++++++.++.. ........| . .+.. ...+||.++|+.|+.+++++.. +|++|+|++|+. .|..++.++.
T Consensus 96 ~gi~~~v~~~~~~-~~~~~~~~g-~-~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~i~~G~r~dd~~-~r~~~~~~~~ 171 (215)
T 1sur_A 96 LKLNLKVYRATES-AAWQEARYG-K-LWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAI 171 (215)
T ss_dssp TTCEEEEEECSSC-HHHHHHHHC-C-GGGSHHHHHHHHHHHHTHHHHHHHHHHTTEEEEECCCCTTSSS-TTTTCCSEEE
T ss_pred hCCcEEEEeCCCC-HHHHHHhcC-C-CCCCCccHHHHHHHHHHHHHHHHHHHhcCCceEEEEeehhhhh-hhcCCCcccc
Confidence 9999999988753 333444455 2 2222 3468999999999999998664 799999999996 8988877653
Q ss_pred CCCCcCccCCCCCeEEEEeCccCcHHHHHHHHHhcCCCcchhhhcCCcccCccC
Q 012424 238 DPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEP 291 (464)
Q Consensus 238 d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~ 291 (464)
. ++..+++||++|+.+|||.|++.++|||||||++||+||||+|
T Consensus 172 ~----------~~~~~i~PLl~~t~~dI~~y~~~~~lp~~~lY~~Gy~siGC~p 215 (215)
T 1sur_A 172 Q----------RGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTH 215 (215)
T ss_dssp E----------TTEEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSCCCBCC
T ss_pred C----------CCEEEEechHhCCHHHHHHHHHHhCCCCChHHhCCCCCCCCCC
Confidence 2 2478899999999999999999999999999999999999986
No 7
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-39 Score=317.77 Aligned_cols=185 Identities=16% Similarity=0.267 Sum_probs=147.0
Q ss_pred HHH-HHHHHHHHcC---CcEEEEechhHHHHHH-HHHHHc----------------------CCCeEEEEEeCCCCcHHH
Q 012424 100 PLE-IMDRALEKFG---NDIAIAFSGAEDVALI-EYAHLT----------------------GRPFRVFSLDTGRLNPET 152 (464)
Q Consensus 100 ~~e-il~~a~~~~~---~~i~vafSGGKDS~ll-~L~~~~----------------------~~~i~vv~~DTg~~fpeT 152 (464)
.++ +|+++++.|+ ++++|+|||||||+|| ||+.+. +.+++++|+|||.+||||
T Consensus 37 ~~~~il~~~~~~~~~~~~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet 116 (306)
T 2wsi_A 37 TRKYLLSEIFVRWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTL 116 (306)
T ss_dssp HHHHHHHTTTTTSCSSSSSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHHHcccccCCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHH
Confidence 454 8888899887 5799999999999766 888764 467999999999999999
Q ss_pred HHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCCcchhhhhhccccchHHHHhccCcEEEEeeeccCCcccccCC
Q 012424 153 YRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEI 232 (464)
Q Consensus 153 ~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~R~~ES~~~R~~~ 232 (464)
++|+++++++||++++++.++... .. .+ ...+...+|+.|+ .+++++|+|++|+. .|+..
T Consensus 117 ~~fv~~~~~~ygl~l~v~~~~~~~------~~---~l----~~~~~~~~k~~p~------~~aii~G~Rrdds~-~r~l~ 176 (306)
T 2wsi_A 117 ENFVLETSERYCLSLYESQRQSGA------SV---NM----ADAFRDFIKIYPE------TEAIVIGIRHTDPF-GEALK 176 (306)
T ss_dssp HHHHHHHHHHTTEEEEECCC-----------C---CH----HHHHHHHHHHCTT------CCEEECCCCCCSSS-CCCCC
T ss_pred HHHHHHHHHHcCCCEEEEeCCccc------cc---cH----HHHHHHHHhhCCC------CcEEEEEEeccccc-ccccC
Confidence 999999999999999998776321 00 01 1122333465553 56899999999996 77665
Q ss_pred ceeecCCCCcCccCCCCCeEEEEeCccCcHHHHHHHHHhcCCCcchhhhcCCcccCccCCCccCCC---CCccccccccc
Q 012424 233 PVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLP---GQHEREGRWWW 309 (464)
Q Consensus 233 ~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~CT~~~~~---g~~~r~GRw~~ 309 (464)
.+...+. +++++++++||++|++.|||.|++.++|||||||++||+||||++||+|... +++.+.+||||
T Consensus 177 ~~~~~d~-------~~p~~~ri~PL~dWt~~DVw~Yi~~~~lpy~pLYd~GY~SiGc~~cT~pnp~l~~~~~~~~~~~~w 249 (306)
T 2wsi_A 177 PIQRTDS-------NWPDFMRLQPLLHWDLTNIWSFLLYSNEPICGLYGKGFTSIGGINNSLPNPHLRKDSNNPALHFEW 249 (306)
T ss_dssp SEEECCT-------TSCSCEEECTTTTCCHHHHHHHHHHHCCCBCHHHHTTCSSCCCTTTBCSCGGGBGGGCCCCCSCHH
T ss_pred ceeccCC-------CCCCcEEEeChHHCCHHHHHHHHHHcCCCCChhHhcCCCcCCcccCCCcCHHHhcccccccccccc
Confidence 5443342 4567899999999999999999999999999999999999999999998653 45678899999
Q ss_pred cC
Q 012424 310 ED 311 (464)
Q Consensus 310 ~~ 311 (464)
+-
T Consensus 250 e~ 251 (306)
T 2wsi_A 250 EI 251 (306)
T ss_dssp HH
T ss_pred cc
Confidence 74
No 8
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.85 E-value=9e-21 Score=158.40 Aligned_cols=103 Identities=19% Similarity=0.372 Sum_probs=88.6
Q ss_pred eeecC-cchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 354 LVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 354 v~~L~-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
|.+++ .++|++.+. ...++++||+|||+||++|+.+.|.|+++++.+++ +.|++||++++ ++++ ++|+|.++||
T Consensus 2 V~~i~~~~~f~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~-~~l~-~~~~V~~~PT 76 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLN-EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDEC-EDIA-QDNQIACMPT 76 (105)
T ss_dssp CEECCSHHHHHHHHH-HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTC-HHHH-HHTTCCBSSE
T ss_pred eEEeCCHHHHHHHHH-hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccC-HHHH-HHcCCCeecE
Confidence 45564 478999886 33578999999999999999999999999999875 99999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 464 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l~ 464 (464)
+++|++|+. ...+.| .+.++|.+||++.|
T Consensus 77 ~~~~~~G~~-v~~~~G--~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 77 FLFMKNGQK-LDSLSG--ANYDKLLELVEKNK 105 (105)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHHC
T ss_pred EEEEECCEE-EEEEeC--cCHHHHHHHHHhcC
Confidence 999999983 334444 68999999999864
No 9
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.84 E-value=3.3e-20 Score=159.32 Aligned_cols=108 Identities=15% Similarity=0.361 Sum_probs=96.5
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC----CCeEEEEEEcCCCcHHHHHHcCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQKEYAKQKLQ 426 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~Id~d~~~~~l~~~~~~ 426 (464)
+..|.+|++++|++.+. +.++++||+|||+||++|+.+.|.|+++++.+.. .++.|++||++.+ ++++ ++|+
T Consensus 14 ~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~ 89 (127)
T 3h79_A 14 PSRVVELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY-PDVI-ERMR 89 (127)
T ss_dssp CCCCEECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC-HHHH-HHTT
T ss_pred CCceEECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc-HhHH-HhcC
Confidence 45899999999999885 3589999999999999999999999999998742 3699999999999 9999 9999
Q ss_pred CCCCCEEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 012424 427 LGSFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 I~~~PTi~lf~~g~~~-~~~y~gg~~~~e~L~~fI~~l 463 (464)
|.++||+++|++|+.. ...|.| .++.++|.+||+++
T Consensus 90 v~~~Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSGFPTMRYYTRIDKQEPFEYSG-QRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSSSEEEEECSSCSSSCEECCS-CCCHHHHHHHHHHH
T ss_pred CccCCEEEEEeCCCCCCceEecC-CccHHHHHHHHHhc
Confidence 9999999999988753 378887 69999999999875
No 10
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.80 E-value=1.8e-19 Score=159.34 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=89.9
Q ss_pred CCCeeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 351 SQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 351 ~~~v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
+-.+..|+. ++|++.+. ...+++|||+|||+||+||+.+.|.|+++++++.+ .+.|++||+|++ ++++ .+|+|.+
T Consensus 20 s~mv~~l~t~~~f~~~v~-~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~-~e~a-~~y~V~s 95 (160)
T 2av4_A 20 SFMLQHLNSGWAVDQAIV-NEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV-PDFN-TMYELYD 95 (160)
T ss_dssp --CCEECCSHHHHHHHHH-HCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TTTTCCS
T ss_pred hhhhhccCCHHHHHHHHH-hcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCCCC
Confidence 334677754 88988774 23678999999999999999999999999999987 699999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCe-e-------ecCCCCCC-HHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKP-I-------KYPSERRD-VDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~-~-------~y~gg~~~-~e~L~~fI~~l 463 (464)
+||++||++|+... . +..| ... .++|+++|+++
T Consensus 96 iPT~~fFk~G~~v~vd~Gtgd~~k~vG-a~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 96 PVSVMFFYRNKHMMIDLGTGNNNKINW-PMNNKQEFIDIVETI 137 (160)
T ss_dssp SEEEEEEETTEEEEEECSSSCCSCBCS-CCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEEEEEecCCCCcCeEEe-ecCCHHHHHHHHHHH
Confidence 99999999998421 1 4666 454 89999999864
No 11
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.80 E-value=9.8e-20 Score=158.35 Aligned_cols=107 Identities=9% Similarity=0.186 Sum_probs=92.0
Q ss_pred CCCCeeecCcchHHHHHhhcCCCCcEEEEEecCCC--hhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCC
Q 012424 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWC--QFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL 427 (464)
Q Consensus 350 ~~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC--~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I 427 (464)
.......+++++|++.+. +.++++||+|||+|| ++|+.+.|.+++|+++|.+ ++.|++||+|++ ++++ .+|+|
T Consensus 13 ~~~g~~~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~-~~la-~~ygV 87 (137)
T 2qsi_A 13 RPNAPTLVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAE-RGLM-ARFGV 87 (137)
T ss_dssp ----CEEECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGH-HHHH-HHHTC
T ss_pred HhcCCcccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCC
Confidence 345677899999999885 234599999999999 9999999999999999987 799999999999 9999 99999
Q ss_pred CCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 428 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++||++||++|+ .+....|..+.++|.++|+++
T Consensus 88 ~siPTlilFkdG~--~v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 88 AVCPSLAVVQPER--TLGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp CSSSEEEEEECCE--EEEEEESCCCHHHHHHHHHHH
T ss_pred ccCCEEEEEECCE--EEEEEeCCCCHHHHHHHHHHH
Confidence 9999999999999 454444578999999999864
No 12
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.80 E-value=6.6e-19 Score=146.59 Aligned_cols=105 Identities=19% Similarity=0.277 Sum_probs=94.3
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
..+.+++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 78 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIY--DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEE-KTLF-QRFSLKGVP 78 (111)
T ss_dssp CCSEECCHHHHHHHHT--TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSSC
T ss_pred CcceecCHHHHHHHHH--hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcC-hhHH-HhcCCCcCC
Confidence 4689999999999883 2679999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 79 t~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 79 QILYFKDGEY-KGKMAG-DVEDDEVEQMIADV 108 (111)
T ss_dssp EEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEec-cCCHHHHHHHHHHH
Confidence 9999998873 345666 68999999999875
No 13
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=6.5e-19 Score=153.29 Aligned_cols=105 Identities=26% Similarity=0.534 Sum_probs=95.9
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC--CeEEEEEEcCCCcHHHHHHcCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQLG 428 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~--~v~~~~Id~d~~~~~l~~~~~~I~ 428 (464)
...|..|+.++|++.+. .++++||+||++||++|+.+.|.|+++++.+.+. ++.|+.||++.+ .+++ ++|+|.
T Consensus 16 ~~~v~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~ 90 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA-SMLA-SKFDVS 90 (140)
T ss_dssp ETTEEECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC-HHHH-HHTTCC
T ss_pred CCCCEEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc-HHHH-HHCCCC
Confidence 36799999999999886 6899999999999999999999999999999863 499999999999 9999 999999
Q ss_pred CCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++||+++|++|+ ...|.| .++.++|.+||+++
T Consensus 91 ~~Pt~~~~~~G~--~~~~~g-~~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 91 GYPTIKILKKGQ--AVDYDG-SRTQEEIVAKVREV 122 (140)
T ss_dssp SSSEEEEEETTE--EEECCS-CCCHHHHHHHHHHH
T ss_pred ccCeEEEEECCc--EEEcCC-CCCHHHHHHHHHHh
Confidence 999999998887 678887 79999999999875
No 14
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.2e-18 Score=149.69 Aligned_cols=107 Identities=27% Similarity=0.523 Sum_probs=95.8
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
...|.+|+.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ .+.|+.||++.+ .+++ ++|+|.++
T Consensus 16 ~~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v~~~ 90 (130)
T 2dml_A 16 SDDVIELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKH-QSLG-GQYGVQGF 90 (130)
T ss_dssp TSSSEECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHHTCCSS
T ss_pred CCCcEECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCC-HHHH-HHcCCCcc
Confidence 36799999999999653 3688999999999999999999999999999987 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+.....+.| ..+.++|.+||.+.
T Consensus 91 Pt~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 91 PTIKIFGANKNKPEDYQG-GRTGEAIVDAALSA 122 (130)
T ss_dssp SEEEEESSCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred CEEEEEeCCCCeEEEeec-CCCHHHHHHHHHHH
Confidence 999999888865677777 78999999999753
No 15
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.79 E-value=1e-19 Score=158.83 Aligned_cols=103 Identities=11% Similarity=0.071 Sum_probs=93.4
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCC--ChhHHhhHHHHHHHHHHhcCCC-eEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKLAGNG-VKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~w--C~~C~~~~p~~~~la~~~~~~~-v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
.+..+++++|++.+. .++++||+|||+| |++|+.+.|.+++++++|.+ + +.|++||+|++ ++++ .+|+|.+
T Consensus 18 g~~~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g-~~v~~~KVdvDe~-~~lA-~~ygV~s 91 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD-YTWQVAIADLEQS-EAIG-DRFGAFR 91 (140)
T ss_dssp TCEECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT-SCCEEEECCHHHH-HHHH-HHHTCCS
T ss_pred CCccCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC-CeEEEEEEECCCC-HHHH-HHcCCcc
Confidence 778999999999885 7789999999999 99999999999999999987 7 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+ .+....|..+.++|.++|+++
T Consensus 92 IPTlilFk~G~--~v~~~~G~~~k~~l~~~i~~~ 123 (140)
T 2qgv_A 92 FPATLVFTGGN--YRGVLNGIHPWAELINLMRGL 123 (140)
T ss_dssp SSEEEEEETTE--EEEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCE--EEEEEecCCCHHHHHHHHHHH
Confidence 99999999999 444444478999999999864
No 16
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.78 E-value=1.2e-18 Score=144.17 Aligned_cols=104 Identities=24% Similarity=0.400 Sum_probs=94.6
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+.+..+++++|++.+. .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.+|++.+ ++++ ++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~P 77 (109)
T 3tco_A 4 DVTLVLTEENFDEVIR---NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDEN-QKIA-DKYSVLNIP 77 (109)
T ss_dssp CCCEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CeEEEecHHHHHHHHh---cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccC-HHHH-HhcCcccCC
Confidence 4788999999999987 689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|.+|+. ...+.| ..+.++|.++|+++
T Consensus 78 t~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 78 TTLIFVNGQL-VDSLVG-AVDEDTLESTVNKY 107 (109)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEcCCcE-EEeeec-cCCHHHHHHHHHHH
Confidence 9999988874 445666 68999999999875
No 17
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.78 E-value=1.3e-18 Score=151.71 Aligned_cols=109 Identities=24% Similarity=0.417 Sum_probs=93.8
Q ss_pred CCCCeeecCcchHHHHHhhcC---------CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHH
Q 012424 350 NSQNLVTLNRTGMENLARLDH---------RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEY 420 (464)
Q Consensus 350 ~~~~v~~L~~~~f~~~i~~~~---------~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l 420 (464)
.+..++.|+.++|+..+...+ .++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ +++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~ 97 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKE-PEL 97 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCC-HHH
Confidence 446899999999999876222 478999999999999999999999999999987 799999999999 999
Q ss_pred HHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 421 AKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 421 ~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+ ++|+|.++||+++|+.++. ...+.| ..+.++|.+||+++
T Consensus 98 ~-~~~~v~~~Pt~~~~~~~g~-~~~~~G-~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 98 A-RDFGIQSIPTIWFVPMKGE-PQVNMG-ALSKEQLKGYIDKV 137 (141)
T ss_dssp H-HHTTCCSSSEEEEECSSSC-CEEEES-CCCHHHHHHHHHHT
T ss_pred H-HHcCCCCcCEEEEEeCCCC-EEEEeC-CCCHHHHHHHHHHH
Confidence 9 9999999999999955443 457776 68999999999875
No 18
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.78 E-value=2e-18 Score=143.10 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=92.8
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+.|.+++.++|++.+. +.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 76 (108)
T ss_dssp TTEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-TTHH-HHTTCCSSS
T ss_pred CcceecchhhHHHHHH--hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCcccC
Confidence 4789999999997653 3689999999999999999999999999999987 699999999999 8999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 77 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 106 (108)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCEE-EEEEec-CCCHHHHHHHHHHh
Confidence 9999988873 344555 68999999999875
No 19
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.78 E-value=1.7e-18 Score=157.60 Aligned_cols=112 Identities=15% Similarity=0.272 Sum_probs=94.7
Q ss_pred cccCCCCeeecCcchHHHHHhhcCCCCcEEEEEec-------CCChhHHhhHHHHHHHHHHhc-----CCCeEEEEEEcC
Q 012424 347 DIFNSQNLVTLNRTGMENLARLDHRQEPWLVVLYA-------PWCQFCQAMEGSYVELADKLA-----GNGVKVGKFRAD 414 (464)
Q Consensus 347 ~~~~~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya-------~wC~~C~~~~p~~~~la~~~~-----~~~v~~~~Id~d 414 (464)
.+..+..|++||+++|++++. ..++.++||+||| +||++|+.+.|.|+++++.+. + ++.|++||+|
T Consensus 13 ~l~~~~~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~-~v~f~kvD~d 90 (178)
T 3ga4_A 13 QLKDDTGVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS-LNLFFTVDVN 90 (178)
T ss_dssp TTCCTTSEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEEETT
T ss_pred HhhccCCCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC-CEEEEEEECc
Confidence 334456899999999999875 3346789999999 499999999999999999997 5 7999999999
Q ss_pred CCcHHHHHHcCCCCCCCEEEEEeCCCCCe-----------eecC---CCCCCHHHHHHHHHH
Q 012424 415 GDQKEYAKQKLQLGSFPTILFFPKHSSKP-----------IKYP---SERRDVDSLMAFVDA 462 (464)
Q Consensus 415 ~~~~~l~~~~~~I~~~PTi~lf~~g~~~~-----------~~y~---gg~~~~e~L~~fI~~ 462 (464)
++ ++++ ++|+|+++||+++|++|+... ..|. ++.++++.|.+||.+
T Consensus 91 ~~-~~la-~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 91 EV-PQLV-KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp TC-HHHH-HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHH
T ss_pred cC-HHHH-HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHH
Confidence 99 9999 999999999999999887432 4442 225899999999975
No 20
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.1e-18 Score=148.38 Aligned_cols=105 Identities=26% Similarity=0.566 Sum_probs=94.0
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc----CCCeEEEEEEcCCCcHHHHHHcCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA----GNGVKVGKFRADGDQKEYAKQKLQL 427 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~----~~~v~~~~Id~d~~~~~l~~~~~~I 427 (464)
..|..|++++|++.+. +.++++||+||++||++|+.+.|.|+++++.+. + ++.|+.||++.+ ++++ ++|+|
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v 81 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVL--DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG-KVKLAAVDATVN-QVLA-SRYGI 81 (133)
T ss_dssp CSCEECCTTHHHHHTT--TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT-SEEEEEEETTTC-CHHH-HHHTC
T ss_pred CcCEEcCHhhHHHHHh--cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC-cEEEEEEECCCC-HHHH-HhCCC
Confidence 5799999999999763 367899999999999999999999999999997 4 799999999999 8999 99999
Q ss_pred CCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 428 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++||+++|++|+. ...+.| .++.++|.+||+++
T Consensus 82 ~~~Pt~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 82 RGFPTIKIFQKGES-PVDYDG-GRTRSDIVSRALDL 115 (133)
T ss_dssp CSSSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred CeeCeEEEEeCCCc-eEEecC-CCCHHHHHHHHHHH
Confidence 99999999999763 566776 78999999999864
No 21
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.77 E-value=2.5e-18 Score=141.72 Aligned_cols=103 Identities=20% Similarity=0.290 Sum_probs=93.2
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
..+.++++++|++.+ .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 75 (106)
T 3die_A 3 MAIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEG-KADILKLDVDEN-PSTA-AKYEVMSIP 75 (106)
T ss_dssp CCCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred cceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEECCcC-HHHH-HhCCCcccC
Confidence 468999999999987 689999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 3die_A 76 TLIVFKDGQP-VDKVVG-FQPKENLAEVLDKH 105 (106)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEEeCCeE-EEEEeC-CCCHHHHHHHHHHh
Confidence 9999998873 445555 78999999999875
No 22
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=2.6e-18 Score=147.01 Aligned_cols=102 Identities=19% Similarity=0.441 Sum_probs=91.7
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+.|++|++++|+++++ +.+||+||++||++|+.+.|.|+++++.+.+.++.|+.||++.+ .+++ ++|+|.++|
T Consensus 7 ~~v~~l~~~~f~~~~~-----~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~P 79 (126)
T 1x5e_A 7 GNVRVITDENWRELLE-----GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ-PGLS-GRFIINALP 79 (126)
T ss_dssp CSEEECCTTTHHHHTS-----SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccEEecHHHHHHHhC-----CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC-HHHH-HHcCCcccC
Confidence 5799999999998764 23999999999999999999999999999754699999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+ ...+.| ..+.++|.+||+++
T Consensus 80 t~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 80 TIYHCKDGE--FRRYQG-PRTKKDFINFISDK 108 (126)
T ss_dssp EEEEEETTE--EEECCS-CCCHHHHHHHHHTC
T ss_pred EEEEEeCCe--EEEeec-CCCHHHHHHHHHHH
Confidence 999998887 677877 78999999999864
No 23
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.77 E-value=3.7e-18 Score=140.88 Aligned_cols=106 Identities=21% Similarity=0.345 Sum_probs=93.8
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
++|.++++++|++.+. ..+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVL--KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDN-PETP-NAYQVRSIP 76 (107)
T ss_dssp CCEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTC-CHHH-HHTTCCSSS
T ss_pred CceeecchhhhhHHHH--hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCC-HHHH-HhcCCCccC
Confidence 4789999999998663 3789999999999999999999999999999987 799999999999 8999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 464 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l~ 464 (464)
|+++|++|+. ...+.| ..+.++|.+||+++.
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 77 TLMLVRDGKV-IDKKVG-ALPKSQLKAWVESAQ 107 (107)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHTC
T ss_pred EEEEEeCCEE-EEEecC-CCCHHHHHHHHHhcC
Confidence 9999988873 344555 689999999998763
No 24
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.77 E-value=3.2e-18 Score=142.25 Aligned_cols=104 Identities=24% Similarity=0.513 Sum_probs=93.1
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
+.|..+++++|++.+. ++++||+||++||++|+.+.|.|+++++.+.. .++.|+.+|++.+ ++++ ++|+|.+
T Consensus 5 ~~v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~v~~ 78 (111)
T 3uvt_A 5 STVLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE-RNIC-SKYSVRG 78 (111)
T ss_dssp CCSEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc-HhHH-HhcCCCc
Confidence 4799999999999885 67999999999999999999999999998764 2699999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| ..+.++|.+||++.
T Consensus 79 ~Pt~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 79 YPTLLLFRGGKK-VSEHSG-GRDLDSLHRFVLSQ 110 (111)
T ss_dssp SSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred ccEEEEEeCCcE-EEeccC-CcCHHHHHHHHHhc
Confidence 999999998874 456666 68999999999863
No 25
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.77 E-value=2.6e-18 Score=141.67 Aligned_cols=102 Identities=24% Similarity=0.393 Sum_probs=90.8
Q ss_pred eeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012424 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 433 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi 433 (464)
|+++++++|++++. .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||+
T Consensus 2 v~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 75 (105)
T 1nsw_A 2 TMTLTDANFQQAIQ---GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDEN-PETT-SQFGIMSIPTL 75 (105)
T ss_dssp CEEECTTTHHHHHS---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceeccHHhHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCC-HHHH-HHcCCccccEE
Confidence 67899999997765 779999999999999999999999999999987 699999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 434 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 434 ~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 ~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 76 ILFKGGRP-VKQLIG-YQPKEQLEAQLADV 103 (105)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHTTTT
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHHH
Confidence 99988873 344555 68999999999765
No 26
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.77 E-value=3.8e-18 Score=140.97 Aligned_cols=103 Identities=17% Similarity=0.326 Sum_probs=92.6
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
.|.+|++++|++++. .+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (109)
T 2yzu_A 2 KPIEVTDQNFDETLG---QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDEN-PKTA-MRYRVMSIPT 75 (109)
T ss_dssp CCEECCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred cceEccHhHHHHHhc---CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCC-HhHH-HhCCCCcCCE
Confidence 588999999998776 689999999999999999999999999999987 699999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 76 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 76 VILFKDGQP-VEVLVG-AQPKRNYQAKIEKH 104 (109)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCcE-eeeEeC-CCCHHHHHHHHHHH
Confidence 999988873 344556 68999999999875
No 27
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.76 E-value=5.5e-18 Score=149.32 Aligned_cols=105 Identities=17% Similarity=0.401 Sum_probs=94.9
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
...+..++.++|++.+. .++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 37 ~~~v~~l~~~~~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v~~~ 110 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAE-PALS-TRFRIRSI 110 (148)
T ss_dssp CCCCEECCTTTHHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cCCceecCHHHHHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCC-HHHH-HHCCCCcc
Confidence 34789999999999885 889999999999999999999999999999987 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 111 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 111 PTIMLYRNGKM-IDMLNG-AVPKAPFDNWLDEQ 141 (148)
T ss_dssp SEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE-EEEEeC-CCCHHHHHHHHHHH
Confidence 99999998873 445666 79999999999865
No 28
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.76 E-value=2.4e-18 Score=150.50 Aligned_cols=106 Identities=19% Similarity=0.332 Sum_probs=93.9
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
...|.++++++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 5 ~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 79 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVE--DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATN-PWTA-EKYGVQGT 79 (140)
T ss_dssp TTTEEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTC-HHHH-HHHTCCEE
T ss_pred CcceEEcchHhHHHHHH--hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcC-HhHH-HHCCCCcC
Confidence 35799999999995443 3689999999999999999999999999999987 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 80 PTFKFFCHGRP-VWEQVG-QIYPSILKNAVRDM 110 (140)
T ss_dssp SEEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred CEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99999998873 445666 68999999999865
No 29
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.76 E-value=2e-18 Score=146.12 Aligned_cols=104 Identities=18% Similarity=0.281 Sum_probs=91.0
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
..+...+.++|++++. ...++++||+||++||++|+.+.|.|+++++.+++ +.|+.||++.+ ++++ ++|+|.++|
T Consensus 12 ~~~~~~t~~~f~~~l~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~-~~l~-~~~~v~~~P 86 (116)
T 3qfa_C 12 SVKQIESKTAFQEALD-AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SECEVKSMP 86 (116)
T ss_dssp CCBCCCCHHHHHHHHH-HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred cccCCCCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCcccc
Confidence 3566678899999886 23689999999999999999999999999999876 99999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 87 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 87 TFQFFKKGQK-VGEFSG-A-NKEKLEATINEL 115 (116)
T ss_dssp EEEEESSSSE-EEEEES-C-CHHHHHHHHHHH
T ss_pred EEEEEeCCeE-EEEEcC-C-CHHHHHHHHHHh
Confidence 9999988873 445555 5 999999999875
No 30
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.76 E-value=2.8e-18 Score=143.91 Aligned_cols=102 Identities=20% Similarity=0.300 Sum_probs=91.7
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
.+++++.++|++.+ .++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 74 (112)
T 2voc_A 2 AIVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDEN-QETA-GKYGVMSIPT 74 (112)
T ss_dssp CCEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTC-CSHH-HHTTCCSBSE
T ss_pred CeEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCCcccE
Confidence 47889999999977 579999999999999999999999999999987 799999999999 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 75 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 75 LLVLKDGEV-VETSVG-FKPKEALQELVNKH 103 (112)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999988873 445666 79999999999865
No 31
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.76 E-value=4.9e-18 Score=144.11 Aligned_cols=107 Identities=21% Similarity=0.372 Sum_probs=94.2
Q ss_pred CCCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 350 ~~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
.++.+..+++++|++.+. +.++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ .+++ ++|+|.+
T Consensus 11 ~~~~~~~~~~~~f~~~v~--~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~ 85 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVV--NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDH-TDLA-IEYEVSA 85 (119)
T ss_dssp CCSEEECCSHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTT-HHHH-HHTTCCS
T ss_pred CceEEEecChhhHHHHHH--cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCC-HHHH-HHcCCCc
Confidence 346799999999998664 3688999999999999999999999999999977 699999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 86 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 86 VPTVLAMKNGDV-VDKFVG-IKDEDQLEAFLKKL 117 (119)
T ss_dssp SSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred ccEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 999999988873 345555 68999999999875
No 32
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.76 E-value=6e-18 Score=145.42 Aligned_cols=102 Identities=18% Similarity=0.251 Sum_probs=90.5
Q ss_pred CCeeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 352 QNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 352 ~~v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
..|.+|++ ++|++.+. .++++||+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 19 ~mv~~l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~-~~l~-~~~~v~~~ 91 (125)
T 1r26_A 19 PSVVDVYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNN-SEIV-SKCRVLQL 91 (125)
T ss_dssp SCCEEECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceEECCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCC-HHHH-HHcCCCcc
Confidence 35889998 99999885 78999999999999999999999999999995 599999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 92 Pt~~i~~~G~~-~~~~~G--~~~~~l~~~l~~~ 121 (125)
T 1r26_A 92 PTFIIARSGKM-LGHVIG--ANPGMLRQKLRDI 121 (125)
T ss_dssp SEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred cEEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 99999988873 334554 5889999999875
No 33
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.76 E-value=6.7e-18 Score=140.94 Aligned_cols=105 Identities=17% Similarity=0.309 Sum_probs=92.4
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
..|..+++++|++.+. +.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 79 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVL--KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDEN-PGTA-AKYGVMSIP 79 (112)
T ss_dssp CCCEEECTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred ceEEecchhhHHHHHh--hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCC-HHHH-HhCCCCccc
Confidence 4688999999987653 3689999999999999999999999999999976 699999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 80 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 80 TLNVYQGGEV-AKTIVG-AKPKAAIVRDLEDF 109 (112)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHTHHH
T ss_pred EEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999988873 344555 68899999999875
No 34
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.76 E-value=4.8e-18 Score=151.65 Aligned_cols=104 Identities=23% Similarity=0.464 Sum_probs=93.5
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
..++++++++|++.+. .++++||+||++||++|+.+.|.|+++++.+.+ ++.|++||++.+ ++++ ++|+|.++|
T Consensus 47 ~~~~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~-~~l~-~~~~i~~~P 120 (155)
T 2ppt_A 47 GKVAGIDPAILARAER---DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAH-PAVA-GRHRIQGIP 120 (155)
T ss_dssp SSEEECCHHHHHHHTT---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTS-THHH-HHTTCCSSS
T ss_pred CCCccCCHHHHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCcc-HHHH-HHcCCCcCC
Confidence 4688999999999874 789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 121 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 121 AFILFHKGRE-LARAAG-ARPASELVGFVRGK 150 (155)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCeE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999988873 344555 78999999999875
No 35
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.76 E-value=6.8e-18 Score=146.76 Aligned_cols=106 Identities=22% Similarity=0.359 Sum_probs=93.2
Q ss_pred CCeeecCcchHHHHHhhc---------CCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH
Q 012424 352 QNLVTLNRTGMENLARLD---------HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK 422 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~---------~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~ 422 (464)
..|++|++++|++.+... ..++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ .+++
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~- 85 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKE-QELA- 85 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCC-HHHH-
Confidence 478999999999977521 1468999999999999999999999999999986 699999999999 9999
Q ss_pred HcCCCCCCCEEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 423 QKLQLGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~~~PTi~lf-~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|+|.++||+++| ++|+ .+.+.| ..+.++|.+||+++
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGK--PEMAQG-AMPKASFKKAIDEF 124 (136)
T ss_dssp HHTTCCSSCEEEEECSSSC--CEEEES-CCCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCCc--EEEEeC-CCCHHHHHHHHHHH
Confidence 99999999999999 6776 456776 68999999999875
No 36
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.76 E-value=9.2e-18 Score=140.33 Aligned_cols=105 Identities=21% Similarity=0.348 Sum_probs=93.2
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+.|.+++.++|++.+. ..++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~P 81 (115)
T 1thx_A 7 KGVITITDAEFESEVL--KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPN-PTTV-KKYKVEGVP 81 (115)
T ss_dssp CSEEECCGGGHHHHTT--TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTC-HHHH-HHTTCCSSS
T ss_pred CceEEeeccchhhHhh--cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCC-HHHH-HHcCCCcee
Confidence 4699999999998753 3789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 82 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 82 ALRLVKGEQI-LDSTEG-VISKDKLLSFLDTH 111 (115)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEcCCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999988873 344556 68999999999875
No 37
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.76 E-value=6.3e-18 Score=141.28 Aligned_cols=101 Identities=17% Similarity=0.278 Sum_probs=88.7
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
.....+.++|++.+. +++++||+||++||++|+.+.|.|+++++.+++ +.|+.||++.+ ++++ ++|+|.++||
T Consensus 8 ~~~~~~~~~f~~~~~---~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~-~~l~-~~~~v~~~Pt 80 (109)
T 3f3q_A 8 VTQFKTASEFDSAIA---QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDEL-GDVA-QKNEVSAMPT 80 (109)
T ss_dssp CEECCSHHHHHHHTT---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ccCCCCHHHHHHHHh---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCCccCE
Confidence 455567889999886 799999999999999999999999999999975 99999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...+.| . +.++|.++|+++
T Consensus 81 ~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 81 LLLFKNGKE-VAKVVG-A-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEEECCEE-EEEEeC-C-CHHHHHHHHHhh
Confidence 999998773 445555 3 789999999875
No 38
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.75 E-value=6.3e-18 Score=139.78 Aligned_cols=104 Identities=21% Similarity=0.338 Sum_probs=92.1
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
.|..+++++|++.+. +.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (107)
T 1dby_A 2 EAGAVNDDTFKNVVL--ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDES-PNVA-SEYGIRSIPT 76 (107)
T ss_dssp CCEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHHTCCSSCE
T ss_pred ccEeccHHHHHHHHh--cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCC-HHHH-HHCCCCcCCE
Confidence 578899999998764 3689999999999999999999999999999987 699999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 77 IMVFKGGKK-CETIIG-AVPKATIVQTVEKY 105 (107)
T ss_dssp EEEESSSSE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999988873 344555 68999999999875
No 39
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.75 E-value=8.2e-18 Score=140.47 Aligned_cols=104 Identities=19% Similarity=0.352 Sum_probs=90.3
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-CCcHHHHHHcCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGSF 430 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d-~~~~~l~~~~~~I~~~ 430 (464)
+.|..|++++|++.+. ...++++||+||++||++|+.+.|.|+++++.+++ +.|+.||++ .+ .+++ ++|+|.++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~-~~~~-~~~~v~~~ 79 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRVV 79 (111)
T ss_dssp TSEEEECTTTHHHHHT-TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSBS
T ss_pred CccEEechHHHHHHHH-hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcch-HHHH-HHcCCCee
Confidence 5799999999999885 22588999999999999999999999999999875 999999999 56 8999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 80 PTFKILKENSV-VGEVTG-A-KYDKLLEAIQAA 109 (111)
T ss_dssp SEEEEESSSSE-EEEEES-S-CHHHHHHHHHHH
T ss_pred eEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHh
Confidence 99999988873 334555 3 589999999876
No 40
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.75 E-value=7.7e-18 Score=140.71 Aligned_cols=106 Identities=11% Similarity=0.293 Sum_probs=87.1
Q ss_pred CeeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 353 NLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 353 ~v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+|.++++ ++|++++.....+++++|+||++||++|+.+.|.|+++++.+...++.|+.||++.+ ++++ ++|+|.++|
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~~P 78 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN-SEIS-ELFEISAVP 78 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC-HHHH-HHcCCCccc
Confidence 3678887 999998862134899999999999999999999999999996433699999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 79 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 79 YFIIIHKGTI-LKELSG-A-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEEETTEE-EEEECS-C-CHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEecC-C-CHHHHHHHHHHH
Confidence 9999988873 344555 3 566799999865
No 41
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.75 E-value=4.9e-18 Score=146.47 Aligned_cols=105 Identities=22% Similarity=0.359 Sum_probs=92.8
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
..|++|+.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 22 ~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 96 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 96 (128)
T ss_dssp CCSEEECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC-CTTS-GGGTCCSSS
T ss_pred cccEecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCccC
Confidence 4689999999997652 3789999999999999999999999999999987 699999999999 8999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 97 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 97 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 126 (128)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCEE-EEEEcC-CCCHHHHHHHHHHh
Confidence 9999988873 344555 68999999999875
No 42
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.75 E-value=5.2e-18 Score=143.99 Aligned_cols=106 Identities=22% Similarity=0.446 Sum_probs=91.2
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+.|.+|++++|++.+. +.++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~P 77 (122)
T 3aps_A 3 QASIDLTPQTFNEKVL--QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAY-PQTC-QKAGIKAYP 77 (122)
T ss_dssp CCSEECCHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred cchhcCCHHHHHHHHh--cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCC-HHHH-HHcCCCccc
Confidence 4689999999976442 3689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| |..+.++|.+||+++
T Consensus 78 t~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 78 SVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp EEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHH
T ss_pred eEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHH
Confidence 9999987764 344444 137999999999864
No 43
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.75 E-value=1.4e-18 Score=143.97 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=74.6
Q ss_pred CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEe
Q 012424 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP 437 (464)
Q Consensus 358 ~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~ 437 (464)
+.++|++.++ .+++++|+|||+||++|+.+.|.++++++.++ ++.|+.||++.+ ++++ ++|+|.++||+++|+
T Consensus 7 ~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~-~~l~-~~~~v~~~Pt~~~~~ 79 (105)
T 4euy_A 7 TIEELATYIE---EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDM-QEIA-GRYAVFTGPTVLLFY 79 (105)
T ss_dssp ---CCSSSTT---CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC-----------CCCCEEEEEE
T ss_pred CHHHHHHHHh---cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCC-HHHH-HhcCCCCCCEEEEEe
Confidence 4466766664 78999999999999999999999999999985 599999999999 9999 999999999999999
Q ss_pred CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 438 KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 438 ~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|+. ...+.| ..+.++|.++|+++
T Consensus 80 ~G~~-~~~~~g-~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NGKE-ILRESR-FISLENLERTIQLF 103 (105)
T ss_dssp TTEE-EEEEES-SCCHHHHHHHHHTT
T ss_pred CCeE-EEEEeC-CcCHHHHHHHHHHh
Confidence 8873 344455 78999999999875
No 44
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.75 E-value=2.7e-18 Score=144.41 Aligned_cols=106 Identities=25% Similarity=0.590 Sum_probs=94.9
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
+.|.+++.++|++.+. .++++||+||++||++|+.+.|.|+++++.+.+ .++.|+.+|++.+ ++++ ++|+|.+
T Consensus 7 ~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~ 81 (120)
T 1mek_A 7 DHVLVLRKSNFAEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE-SDLA-QQYGVRG 81 (120)
T ss_dssp TTEEECCTTTHHHHHH---HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC-CSSH-HHHTCCS
T ss_pred CCcEEechhhHHHHHc---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC-HHHH-HHCCCCc
Confidence 5799999999999886 689999999999999999999999999999874 3699999999998 8999 8999999
Q ss_pred CCEEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~-~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+.. ...+.| ..+.++|.+||+++
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~g-~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 82 YPTIKFFRNGDTASPKEYTA-GREADDIVNWLKKR 115 (120)
T ss_dssp SSEEEEEESSCSSSCEECCC-CSSHHHHHHHHHTT
T ss_pred ccEEEEEeCCCcCCcccccC-ccCHHHHHHHHHhc
Confidence 9999999988742 367777 68999999999875
No 45
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.75 E-value=9.9e-18 Score=137.04 Aligned_cols=101 Identities=21% Similarity=0.392 Sum_probs=90.7
Q ss_pred eeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012424 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 433 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi 433 (464)
|++++.++|++.+. .+++++|+||++||++|+.+.|.++++++.+++ +.|+.+|++.+ ++++ ++|+|.++||+
T Consensus 1 V~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 73 (104)
T 2e0q_A 1 VIHLDSKNFDSFLA---SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDEN-PDIA-ARYGVMSLPTV 73 (104)
T ss_dssp CEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSCEE
T ss_pred CeecCHHHHHHHHh---cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCC-HHHH-HhCCccccCEE
Confidence 56889999999886 689999999999999999999999999999976 99999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 434 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 434 ~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|++|+. ...+.| ..+.++|.+||+++
T Consensus 74 ~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 74 IFFKDGEP-VDEIIG-AVPREEIEIRIKNL 101 (104)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEECCeE-hhhccC-CCCHHHHHHHHHHH
Confidence 99988873 345555 68999999999875
No 46
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.74 E-value=1.3e-17 Score=137.11 Aligned_cols=103 Identities=22% Similarity=0.409 Sum_probs=91.2
Q ss_pred eeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012424 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 433 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi 433 (464)
|..+++++|++.+. ..+++++|+||++||++|+.+.|.++++++.+++ ++.|+.+|++.+ ++++ ++|+|.++||+
T Consensus 2 v~~~~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVL--ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA-PGIA-TQYNIRSIPTV 76 (105)
T ss_dssp CEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceechhhhHHHHHh--cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch-HHHH-HhCCCCcccEE
Confidence 67889999999764 3578999999999999999999999999999987 699999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 434 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 434 ~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 77 LFFKNGER-KESIIG-AVPKSTLTDSIEKY 104 (105)
T ss_dssp EEEETTEE-EEEEEE-CCCHHHHHHHHHHH
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHhh
Confidence 99988873 334555 68999999999875
No 47
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.74 E-value=9.4e-18 Score=139.91 Aligned_cols=106 Identities=18% Similarity=0.312 Sum_probs=90.7
Q ss_pred CCeeec-CcchHHHHHhh-cCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTL-NRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L-~~~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
+.|..+ +.++|++.+.. ...++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.+
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~ 78 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAV-AAVA-EAAGITA 78 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTT-HHHH-HHHTCCB
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCch-HHHH-HHcCCCc
Confidence 357788 56899998862 11179999999999999999999999999999986 799999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 79 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 79 MPTFHVYKDGVK-ADDLVG-A-SQDKLKALVAKH 109 (112)
T ss_dssp SSEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred ccEEEEEECCeE-EEEEcC-C-CHHHHHHHHHHH
Confidence 999999988873 345555 5 899999999875
No 48
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.74 E-value=1.8e-17 Score=137.45 Aligned_cols=103 Identities=12% Similarity=0.142 Sum_probs=87.1
Q ss_pred Ceeec-CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 353 NLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 353 ~v~~L-~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
++.++ +.++|++.+. .+.+++++|+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 2 ~v~~i~~~~~~~~~~~-~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~-~~~~-~~~~v~~~P 76 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELS-GAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQC-QGTA-ATNNISATP 76 (107)
T ss_dssp CEEEECSGGGHHHHHH-HTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSSS
T ss_pred ceEEecCHHHHHHHHH-hCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccC-HHHH-HhcCCCccc
Confidence 35566 5689999884 2368999999999999999999999999999994 599999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| .+.++|.++|+++
T Consensus 77 t~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 77 TFQFFRNKVR-IDQYQG--ADAVGLEEKIKQH 105 (107)
T ss_dssp EEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEEECCeE-EEEEeC--CCHHHHHHHHHHh
Confidence 9999998873 344555 4566799999874
No 49
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=1.8e-18 Score=149.18 Aligned_cols=109 Identities=28% Similarity=0.579 Sum_probs=95.1
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
...|..|+.++|+..+. +.++++||+||++||++|+.+.|.|+++++.+.+ .++.|+.||++.+ ..++ ++|+|.+
T Consensus 6 ~~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~ 81 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVM--DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN-DITN-DQYKVEG 81 (133)
T ss_dssp SCSSEECCTTTCCCCCT--CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS-CCCC-SSCCCSS
T ss_pred CCceEEEcCCCHHHHhc--cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC-HHHH-hhcCCCc
Confidence 35799999999998764 3589999999999999999999999999999974 3699999999998 8888 8999999
Q ss_pred CCEEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~-~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+.. .+.|.||.++.++|.+||+++
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 82 FPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp SSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHH
T ss_pred CCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHh
Confidence 9999999887643 457886578999999999875
No 50
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.74 E-value=1e-17 Score=158.87 Aligned_cols=105 Identities=24% Similarity=0.541 Sum_probs=96.2
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC--CeEEEEEEcCCCcHHHHHHcCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQLG 428 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~--~v~~~~Id~d~~~~~l~~~~~~I~ 428 (464)
++.|..|++++|++++. +++++||+|||+||++|+.+.|.|+++++.+++. ++.|+.||++.+ ++++ ++|+|.
T Consensus 14 ~~~v~~l~~~~~~~~~~---~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~v~ 88 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA-SVLA-SRFDVS 88 (241)
T ss_dssp ETTEEEECTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTTCC
T ss_pred CCCcEEecccCHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC-HHHH-HhcCCC
Confidence 46899999999999886 7899999999999999999999999999999873 399999999999 9999 999999
Q ss_pred CCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++||+++|++|+ .+.|.| .++.++|.+||+++
T Consensus 89 ~~Pt~~~~~~g~--~~~~~g-~~~~~~l~~~i~~~ 120 (241)
T 3idv_A 89 GYPTIKILKKGQ--AVDYEG-SRTQEEIVAKVREV 120 (241)
T ss_dssp SSSEEEEEETTE--EEECCS-CSCHHHHHHHHHHH
T ss_pred cCCEEEEEcCCC--cccccC-cccHHHHHHHHhhc
Confidence 999999999888 667887 69999999999864
No 51
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.74 E-value=8.7e-18 Score=164.25 Aligned_cols=107 Identities=18% Similarity=0.372 Sum_probs=94.9
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
.+.|+++|.++|++++. .+.+++|||+||++||++|+.+.|.|+++++++++ ++.|++||++.+ ++++ ++|+|.++
T Consensus 6 ~~~v~~~~~~~f~~~~~-~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~ 81 (287)
T 3qou_A 6 VENIVNINESNLQQVLE-QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE-QMIA-AQFGLRAI 81 (287)
T ss_dssp CTTEEECCTTTHHHHHT-TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC-HHHH-HTTTCCSS
T ss_pred CCccEECCHHHHHHHHH-hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC-HHHH-HHcCCCCC
Confidence 45799999999999875 33589999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| ..+.+.|..||+.+
T Consensus 82 Pt~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 82 PTVYLFQNGQP-VDGFQG-PQPEEAIRALLDXV 112 (287)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CeEEEEECCEE-EEEeeC-CCCHHHHHHHHHHH
Confidence 99999998873 344665 78999999999764
No 52
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.73 E-value=1.5e-17 Score=139.29 Aligned_cols=102 Identities=18% Similarity=0.298 Sum_probs=91.2
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+....++.++|+++++ .++++||+||++||++|+.+.|.++++++.+++ +.|+.||++.+ ++++ ++|+|.++|
T Consensus 9 ~~~~~~~~~~f~~~~~---~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~-~~~~-~~~~v~~~P 81 (112)
T 1syr_A 9 MVKIVTSQAEFDSIIS---QNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEV-SEVT-EKENITSMP 81 (112)
T ss_dssp CCEEECSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred eEEEECCHHHHHHHHc---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCC-HHHH-HHcCCCccc
Confidence 4677889999999986 789999999999999999999999999999864 99999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 82 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 82 TFKVYKNGSS-VDTLLG-A-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEEETTEE-EEEEES-C-CHHHHHHHHHTT
T ss_pred EEEEEECCcE-EEEEeC-C-CHHHHHHHHHHh
Confidence 9999998873 344555 5 999999999875
No 53
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.73 E-value=1.5e-17 Score=140.56 Aligned_cols=105 Identities=20% Similarity=0.371 Sum_probs=92.6
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
..+..++.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 12 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~P 86 (121)
T 2i1u_A 12 SATIKVTDASFATDVL--SSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN-PETA-RNFQVVSIP 86 (121)
T ss_dssp CCSEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred ccceecCHHHHHHHHH--hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhcCCCcCC
Confidence 4789999999997653 3688999999999999999999999999999976 699999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 87 t~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 87 TLILFKDGQP-VKRIVG-AKGKAALLRELSDV 116 (121)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHTCSC
T ss_pred EEEEEECCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999998873 345666 68999999998764
No 54
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.73 E-value=2.5e-17 Score=140.31 Aligned_cols=106 Identities=21% Similarity=0.393 Sum_probs=91.3
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-CCcHHHHHHcCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGS 429 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d-~~~~~l~~~~~~I~~ 429 (464)
.+.+..+++++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ +.|+.+|++ .+ ++++ ++|+|.+
T Consensus 17 ~~~v~~l~~~~~~~~~~-~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~-~~~~-~~~~v~~ 91 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRV 91 (124)
T ss_dssp TTSEEEECTTTHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSS
T ss_pred CCceEEecchhHHHHHH-hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcch-HHHH-HHcCCCe
Confidence 35789999999999876 33689999999999999999999999999999874 999999998 46 8999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 464 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l~ 464 (464)
+||+++|++|+. ...+.| . +.++|.++|++++
T Consensus 92 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~~ 123 (124)
T 1faa_A 92 VPTFKILKENSV-VGEVTG-A-KYDKLLEAIQAAR 123 (124)
T ss_dssp SSEEEEEETTEE-EEEEES-S-CHHHHHHHHHHHT
T ss_pred eeEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHhh
Confidence 999999998873 334555 3 4899999999864
No 55
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.73 E-value=2.9e-17 Score=135.21 Aligned_cols=103 Identities=18% Similarity=0.363 Sum_probs=89.7
Q ss_pred eeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 354 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 354 v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
|.++++ ++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 v~~l~~~~~~~~~l~-~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLT-KASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDEC-EDIA-MEYNISSMPT 77 (106)
T ss_dssp EEECCSHHHHHHHHH-HHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ceecCCHHHHHHHHH-hcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccch-HHHH-HHcCCCcccE
Confidence 667888 89998876 23688999999999999999999999999999965 799999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~g--~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 78 FVFLKNGVK-VEEFAG--ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHT
T ss_pred EEEEcCCcE-EEEEcC--CCHHHHHHHHHHh
Confidence 999998873 344544 6889999999875
No 56
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.72 E-value=1.1e-17 Score=141.53 Aligned_cols=105 Identities=25% Similarity=0.552 Sum_probs=90.7
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC----CCeEEEEEEcCCCcHHHHHHcCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQKEYAKQKLQ 426 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~Id~d~~~~~l~~~~~~ 426 (464)
+..|..|++++|++.+. ..++++||+||++||++|+.+.|.|+++++.+++ .++.|+.||++.+ + ++ + +
T Consensus 6 ~~~v~~l~~~~f~~~v~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~-~~-~--~ 78 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVL--DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN-D-VP-D--E 78 (121)
T ss_dssp SCSSEECCTTTTTTSSS--CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS-C-CS-S--C
T ss_pred CCCeEEecccCHHHHhh--cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc-c-cc-c--c
Confidence 35789999999998752 3789999999999999999999999999999975 2699999999988 3 66 4 9
Q ss_pred CCCCCEEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 012424 427 LGSFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 I~~~PTi~lf~~g~~~-~~~y~gg~~~~e~L~~fI~~l 463 (464)
|.++||+++|++|+.. ...+.| .++.++|.+||+++
T Consensus 79 v~~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 IQGFPTIKLYPAGAKGQPVTYSG-SRTVEDLIKFIAEN 115 (121)
T ss_dssp CSSSSEEEEECSSCTTSCCCCCC-CSCHHHHHHHHHHT
T ss_pred cCcCCeEEEEeCcCCCCceEecC-CCCHHHHHHHHHhc
Confidence 9999999999888643 566776 79999999999875
No 57
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.72 E-value=1.6e-17 Score=141.57 Aligned_cols=103 Identities=16% Similarity=0.147 Sum_probs=84.9
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
.|.+++.++|.+.+...+.+++++|+|||+||++|+.|.|.|++++++|.+ +.|++||+++. + ++|+|.++||
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~----~-~~~~v~~~PT 76 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSC----I-QHYHDNCLPT 76 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGT----S-TTCCGGGCSE
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHh----H-HHCCCCCCCE
Confidence 688899999998775222244999999999999999999999999999974 99999999976 5 7999999999
Q ss_pred EEEEeCCCCCeeecCC------CCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPS------ERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~g------g~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...+.| ...+.++|..+|.+.
T Consensus 77 ~~~fk~G~~-v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 77 IFVYKNGQI-EAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEEETTEE-EEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEE-EEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999985 222222 246899999999753
No 58
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.72 E-value=4.9e-17 Score=152.07 Aligned_cols=105 Identities=24% Similarity=0.554 Sum_probs=95.3
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
...+..+++++|+..+. .++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 96 ~~~v~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 169 (210)
T 3apq_A 96 DPEIITLERREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNSY 169 (210)
T ss_dssp CTTSEECCHHHHHHHHH---HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CCceEEecHHHHHHHHc---cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc-HHHH-HHcCCCcC
Confidence 35789999999999885 789999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 170 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 200 (210)
T 3apq_A 170 PSLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 200 (210)
T ss_dssp SEEEEECTTSC-CEECCS-CCCHHHHHHHHHHH
T ss_pred CeEEEEECCCc-eeEecC-CCCHHHHHHHHHHh
Confidence 99999988874 566776 79999999999864
No 59
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.72 E-value=4.1e-17 Score=134.23 Aligned_cols=101 Identities=20% Similarity=0.358 Sum_probs=87.5
Q ss_pred eec-CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012424 355 VTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 433 (464)
Q Consensus 355 ~~L-~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi 433 (464)
.++ +.++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ +.|+.+|++.+ ++++ ++|+|.++||+
T Consensus 3 ~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~Pt~ 77 (105)
T 3m9j_A 3 KQIESKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SESEVKSMPTF 77 (105)
T ss_dssp EECCSHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTC-HHHH-HHTTCCBSSEE
T ss_pred EEcCCHHHHHHHHH-hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhh-HHHH-HHcCCCcCcEE
Confidence 344 5678888875 33689999999999999999999999999999975 99999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 434 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 434 ~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|++|+. ...+.| . +.++|.++|+++
T Consensus 78 ~~~~~g~~-~~~~~g-~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 78 QFFKKGQK-VGEFSG-A-NKEKLEATINEL 104 (105)
T ss_dssp EEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEECCeE-EEEEeC-C-CHHHHHHHHHHh
Confidence 99988873 345555 5 999999999875
No 60
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.72 E-value=5.9e-17 Score=132.90 Aligned_cols=102 Identities=20% Similarity=0.394 Sum_probs=87.8
Q ss_pred eeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 354 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 354 v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
|.++++ ++|++.+. ...+++++|+||++||++|+.+.|.++++++.++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 1 v~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (104)
T 2vim_A 1 MRVLATAADLEKLIN-ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQN-EEAA-AKYSVTAMPT 75 (104)
T ss_dssp CEECCSHHHHHHHHH-TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred CeecCCHHHHHHHHH-hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCC-HHHH-HHcCCccccE
Confidence 356666 88998875 2368999999999999999999999999999986 599999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 76 ~~~~~~g~~-~~~~~G--~~~~~l~~~l~~~ 103 (104)
T 2vim_A 76 FVFIKDGKE-VDRFSG--ANETKLRETITRH 103 (104)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEeCCcE-EEEEeC--CCHHHHHHHHHhh
Confidence 999998873 334444 5899999999875
No 61
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.72 E-value=4.7e-17 Score=137.25 Aligned_cols=102 Identities=20% Similarity=0.394 Sum_probs=89.3
Q ss_pred CeeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 353 NLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 353 ~v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
++.++++ ++|++.+. ...+++++|+||++||++|+.+.|.|+++++.+ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 14 ~v~~l~~~~~~~~~l~-~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~-~~~~-~~~~v~~~P 87 (117)
T 2xc2_A 14 ELIELKQDGDLESLLE-QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKL-EETA-RKYNISAMP 87 (117)
T ss_dssp EEEECCSTTHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTS-HHHH-HHTTCCSSS
T ss_pred eeEEeCCHHHHHHHHH-hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCcc-HHHH-HHcCCCccc
Confidence 4889988 99999876 336899999999999999999999999999888 499999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| .+.++|.++|+++
T Consensus 88 t~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 88 TFIAIKNGEK-VGDVVG--ASIAKVEDMIKKF 116 (117)
T ss_dssp EEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred eEEEEeCCcE-EEEEeC--CCHHHHHHHHHHh
Confidence 9999988873 334445 5889999999875
No 62
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.72 E-value=2.6e-17 Score=145.93 Aligned_cols=103 Identities=9% Similarity=0.208 Sum_probs=87.1
Q ss_pred cCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEE
Q 012424 357 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFF 436 (464)
Q Consensus 357 L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf 436 (464)
.+.++|++.+. .+.++++||+|||+||++|+.+.|.|+++++.+++ .+.|++||++.+ ++++ ++|+|.++||+++|
T Consensus 9 ~~~~~~~~~i~-~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~-~~~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~ 84 (149)
T 3gix_A 9 TSKKEVDQAIK-STAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK-MAAIYLVDVDQT-AVYT-QYFDISYIPSTVFF 84 (149)
T ss_dssp CSHHHHHHHHH-HCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT-TEEEEEEETTTC-CHHH-HHTTCCSSSEEEEE
T ss_pred CCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCcC-HHHH-HHcCCCccCeEEEE
Confidence 36788988774 23689999999999999999999999999999976 699999999999 9999 99999999999999
Q ss_pred eCCCCCe--------eecCCCCCCHHHHHHHHHHh
Q 012424 437 PKHSSKP--------IKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 437 ~~g~~~~--------~~y~gg~~~~e~L~~fI~~l 463 (464)
++|+... ..+.|...+.++|.++|+++
T Consensus 85 ~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 85 FNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp ETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred ECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 9998310 23333267899999999875
No 63
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=2.7e-18 Score=149.37 Aligned_cols=104 Identities=16% Similarity=0.424 Sum_probs=87.0
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCC---
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG--- 428 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~--- 428 (464)
..|..++.++|++.+. .+.++++||+|||+||++|+.+.|.|+++++++++.++.|+.||++.+ ++++ ++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~~ 83 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY-TDVS-TRYKVSTSP 83 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC-HHHH-HHTTCCCCS
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC-HHHH-HHccCcccC
Confidence 4689999999999885 445569999999999999999999999999999865799999999999 9999 999999
Q ss_pred ---CCCEEEEEeCCCCCeeecCCCCCCHHHHHHHH
Q 012424 429 ---SFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 460 (464)
Q Consensus 429 ---~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI 460 (464)
++||+++|++|+. ...+.| ..+.++|.+||
T Consensus 84 ~~~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l 116 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKE-AMRRPQ-IDKKGRAVSWT 116 (137)
T ss_dssp SSSCSSEEEEESSSSE-EEEESC-BCSSSCBCCCC
T ss_pred CcCCCCEEEEEECCEE-EEEecC-cCchHHHHHHH
Confidence 9999999988873 334444 55555554443
No 64
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.71 E-value=5.8e-17 Score=160.10 Aligned_cols=106 Identities=23% Similarity=0.485 Sum_probs=95.0
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d--~~~~~l~~~~~~I~~ 429 (464)
..|++|+.++|++++. +.++++||+|||+||++|+.+.|.|+++++.+.+ .+.|+.|||+ .+ .++| ++|+|.+
T Consensus 17 ~~vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~~~~-~~l~-~~~~I~~ 91 (298)
T 3ed3_A 17 PHISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDLNKN-KALC-AKYDVNG 91 (298)
T ss_dssp TTCEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTSTTT-HHHH-HHTTCCB
T ss_pred CCeEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccCccC-HHHH-HhCCCCc
Confidence 5799999999999884 3678999999999999999999999999999987 6999999998 45 8999 9999999
Q ss_pred CCEEEEEeCCCC----------------CeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSS----------------KPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~----------------~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ....|.| .++.+.|++||.+.
T Consensus 92 ~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G-~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 92 FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSG-ARTLAPIVDFSLSR 140 (298)
T ss_dssp SSEEEEEECCCC-------------CCCEEEECCS-CCSHHHHHHHHHTT
T ss_pred cceEEEEECCceeecccccccccccccccceeecC-CcCHHHHHHHHHHh
Confidence 999999999861 2678887 79999999999764
No 65
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.71 E-value=4.3e-17 Score=165.62 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=94.5
Q ss_pred CCCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhH------HHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHH
Q 012424 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAME------GSYVELADKLAGNGVKVGKFRADGDQKEYAKQ 423 (464)
Q Consensus 350 ~~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~------p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~ 423 (464)
..+.|++|+.++|++++. .++++||+||||||++|+... |.|+++++.+++.++.|++|||+.+ +++| +
T Consensus 11 ~~~~v~~lt~~~f~~~i~---~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~-~~l~-~ 85 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFK---KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD-AAVA-K 85 (367)
T ss_dssp CCCCCEECCTTTHHHHHH---HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT-HHHH-H
T ss_pred CCCccEECCHHHHHHHHh---hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc-HHHH-H
Confidence 345899999999999986 689999999999999974433 7899999999875699999999999 9999 9
Q ss_pred cCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 424 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 424 ~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|+|+++||+++|++|+ ++.|.| .++.+.|++||++.
T Consensus 86 ~~~V~~~PTl~~f~~G~--~~~y~G-~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 86 KLGLTEEDSIYVFKEDE--VIEYDG-EFSADTLVEFLLDV 122 (367)
T ss_dssp HHTCCSTTEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred HcCCCcCceEEEEECCc--EEEeCC-CCCHHHHHHHHHHh
Confidence 99999999999999987 679988 69999999999763
No 66
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.71 E-value=1.7e-17 Score=142.62 Aligned_cols=87 Identities=18% Similarity=0.369 Sum_probs=79.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSER 450 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~ 450 (464)
.++++||+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||+++|++|+. ...+.| .
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G-~ 115 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKN-ESLA-RKFSVKSLPTIILLKNKTM-LARKDH-F 115 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGC-HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-C
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCCcCEEEEEECCEE-EEEecC-C
Confidence 789999999999999999999999999999986 799999999999 9999 9999999999999988873 445555 7
Q ss_pred CCHHHHHHHHHH
Q 012424 451 RDVDSLMAFVDA 462 (464)
Q Consensus 451 ~~~e~L~~fI~~ 462 (464)
.+.++|.+||++
T Consensus 116 ~~~~~l~~~l~~ 127 (128)
T 3ul3_B 116 VSSNDLIALIKK 127 (128)
T ss_dssp CCHHHHHHHHTT
T ss_pred CCHHHHHHHHHh
Confidence 999999999975
No 67
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.71 E-value=6.7e-17 Score=137.09 Aligned_cols=104 Identities=18% Similarity=0.247 Sum_probs=90.0
Q ss_pred CeeecCcchHHHHHhh-cCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 353 NLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
.+..++.++|++.+.. ...++++||+||++||++|+.+.|.|+++++.+.+ +.|+.||++.+ ++++ ++|+|.++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~P 89 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDEL-KPIA-EQFSVEAMP 89 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCC-HHHH-HHcCCCccc
Confidence 5677789999998762 12578999999999999999999999999999875 99999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| .. .++|.++|+++
T Consensus 90 t~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 90 TFLFMKEGDV-KDRVVG-AI-KEELTAKVGLH 118 (122)
T ss_dssp EEEEEETTEE-EEEEES-SC-HHHHHHHHHHH
T ss_pred EEEEEeCCEE-EEEEeC-cC-HHHHHHHHHHH
Confidence 9999988873 345666 56 99999999875
No 68
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.71 E-value=6.6e-17 Score=138.48 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=89.6
Q ss_pred CCeeec-CcchHHHHHhhc-CCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L-~~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
..|.++ +.++|++.+... ..++++||+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ ++++ ++|+|.+
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~-~~l~-~~~~v~~ 91 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDEL-KSVA-SDWAIQA 91 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccC-HHHH-HHcCCCc
Confidence 467777 668898887632 147899999999999999999999999999986 599999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 92 ~Pt~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 92 MPTFMFLKEGKI-LDKVVG--AKKDELQSTIAKH 122 (124)
T ss_dssp SSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred cCEEEEEECCEE-EEEEeC--CCHHHHHHHHHHh
Confidence 999999988873 334444 4899999999875
No 69
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.71 E-value=3.3e-17 Score=167.25 Aligned_cols=106 Identities=22% Similarity=0.484 Sum_probs=92.1
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-----CCeEEEEEEcCCCcHHHHHHcCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-----NGVKVGKFRADGDQKEYAKQKLQ 426 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-----~~v~~~~Id~d~~~~~l~~~~~~ 426 (464)
+.|+.|++++|++++. .++++||+||||||++|+.+.|.|+++++.+++ .++.|++|||+.+ .++| ++|+
T Consensus 5 ~~v~~l~~~~f~~~~~---~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~-~~l~-~~~~ 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILN---NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH-SDIA-QRYR 79 (382)
T ss_dssp ---CBCCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC-HHHH-HHTT
T ss_pred CceEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc-HHHH-HhcC
Confidence 4688999999999876 679999999999999999999999999999942 2599999999999 9999 9999
Q ss_pred CCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 427 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|.++||+++|++|+.....|.| .++.+.|.+||++.
T Consensus 80 v~~~Pt~~~f~~G~~~~~~~~G-~~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 80 ISKYPTLKLFRNGMMMKREYRG-QRSVKALADYIRQQ 115 (382)
T ss_dssp CCEESEEEEEETTEEEEEECCS-CCSHHHHHHHHHHH
T ss_pred CCcCCEEEEEeCCcEeeeeecC-cchHHHHHHHHHHh
Confidence 9999999999999842225887 79999999999864
No 70
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.71 E-value=5.4e-17 Score=141.54 Aligned_cols=104 Identities=23% Similarity=0.345 Sum_probs=77.9
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+.+.+++.++|+..+. +.++ +||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 33 ~~v~~l~~~~~~~~~~--~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 106 (140)
T 1v98_A 33 PWVVEADEKGFAQEVA--GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH-PGLA-ARYGVRSVP 106 (140)
T ss_dssp ------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccccCCHHHHHHHHH--cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC-HHHH-HHCCCCccC
Confidence 4688899999998875 2344 99999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 107 t~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 107 TLVLFRRGAP-VATWVG-ASPRRVLEERLRPY 136 (140)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCcE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999998873 344555 68999999999875
No 71
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.70 E-value=1.1e-17 Score=143.41 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=86.9
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCCh--------------hHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ--------------FCQAMEGSYVELADKLAGNGVKVGKFRADGDQ 417 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~--------------~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~ 417 (464)
+.|++|++++|++.+. +.++++||+||++||+ +|+.+.|.|+++++.+++ ++.|++||++.+
T Consensus 3 ~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~- 78 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN- 78 (123)
T ss_dssp CSCEECCSTTHHHHTT--SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC-
T ss_pred CccEecChhhHHHHHH--hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC-
Confidence 4689999999987653 4789999999999999 999999999999999987 699999999999
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++++ ++|+|.++||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 79 ~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 79 PGTA-PKYGIRGIPTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 121 (123)
T ss_dssp TTTG-GGGTCCBSSEEEEEESSSE-EEEEES-CCCHHHHHHHHTTT
T ss_pred HHHH-HHcCCCccCEEEEEECCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 8999 9999999999999988873 345666 68999999999865
No 72
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.70 E-value=1.2e-16 Score=168.78 Aligned_cols=107 Identities=19% Similarity=0.500 Sum_probs=97.7
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
.+.|+.|++++|++++. .++++||+||||||++|+.+.|.|+++++.+++.++.|++|||+.+ +++| ++|+|.++
T Consensus 13 ~~~v~~l~~~~f~~~~~---~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~ 87 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQ---SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN-QDLC-MEHNIPGF 87 (504)
T ss_dssp TSSCEECCTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred CCCcEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HhcCCCcC
Confidence 35799999999999886 7899999999999999999999999999999874599999999999 9999 99999999
Q ss_pred CEEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~-~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+.. ...|.| .++.+.|.+||++.
T Consensus 88 Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 88 PSLKIFKNSDVNNSIDYEG-PRTAEAIVQFMIKQ 120 (504)
T ss_dssp SEEEEEETTCTTCEEECCS-CCSHHHHHHHHHHH
T ss_pred CEEEEEeCCccccceeecC-CCCHHHHHHHHHHh
Confidence 999999998843 678887 79999999999864
No 73
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.70 E-value=7.3e-17 Score=143.27 Aligned_cols=104 Identities=26% Similarity=0.398 Sum_probs=88.9
Q ss_pred CCeeecC-cchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 352 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 352 ~~v~~L~-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
..+..++ .++|++++. ...++++||+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 12 ~~v~~l~~~~~~~~~~~-~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~ 86 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLR-LKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGV-PEVS-EKYEISSV 86 (153)
T ss_dssp CCSEEECSHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSS
T ss_pred CCeEEcCCHHHHHHHHH-hcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCC-HHHH-HHcCCCCC
Confidence 4678886 589999886 2238999999999999999999999999999985 599999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 87 Pt~~~~~~G~~-~~~~~G--~~~~~l~~~i~~~ 116 (153)
T 2wz9_A 87 PTFLFFKNSQK-IDRLDG--AHAPELTKKVQRH 116 (153)
T ss_dssp SEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred CEEEEEECCEE-EEEEeC--CCHHHHHHHHHHH
Confidence 99999997773 333444 5788999999875
No 74
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.70 E-value=5.8e-17 Score=153.03 Aligned_cols=106 Identities=24% Similarity=0.397 Sum_probs=94.4
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
...+..+|.++|++.+. +.++++||+|||+||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 11 ~~~~~~lt~~~f~~~v~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~ 85 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGI 85 (222)
T ss_dssp SCCCEECCTTTHHHHHT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-TTTG-GGGTCCSB
T ss_pred CCCceeCCHHHHHHHHH--hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCC-HHHH-HHcCCCcC
Confidence 45899999999998543 3789999999999999999999999999999987 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 86 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 116 (222)
T 3dxb_A 86 PTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 116 (222)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE-EEEecc-ccChHHHHHHHHhh
Confidence 99999998873 345666 78999999999875
No 75
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.70 E-value=5.3e-17 Score=135.81 Aligned_cols=100 Identities=15% Similarity=0.261 Sum_probs=86.4
Q ss_pred eeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012424 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 433 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi 433 (464)
+..++.++| +.+. .++++||+||++||++|+.+.|.|+++++.+. ++.|+.||++.+ ++++ ++|+|.++||+
T Consensus 5 ~~~~~~~~f-~~~~---~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~Pt~ 76 (110)
T 2l6c_A 5 RDITTEAGM-AHFE---GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEAR-PELM-KELGFERVPTL 76 (110)
T ss_dssp SBCGGGCSH-HHHT---TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGC-HHHH-HHTTCCSSCEE
T ss_pred eecCCHHHH-HHHH---cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCC-HHHH-HHcCCcccCEE
Confidence 456788899 5554 67999999999999999999999999998886 499999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 434 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 434 ~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|++|+. ...+.| ..+.++|.++|++.
T Consensus 77 ~~~~~G~~-v~~~~G-~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 77 VFIRDGKV-AKVFSG-IMNPRELQALYASI 104 (110)
T ss_dssp EEEESSSE-EEEEES-CCCHHHHHHHHHTC
T ss_pred EEEECCEE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99988873 345555 78999999999864
No 76
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.70 E-value=6.8e-17 Score=136.30 Aligned_cols=101 Identities=20% Similarity=0.346 Sum_probs=86.0
Q ss_pred CeeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 353 NLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 353 ~v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
.+.++++ ++|+++++ .++++||+||++||++|+.+.|.|+++++.+.+ +.|+.||++.+ ++++ ++|+|.++|
T Consensus 13 ~~~~~~~~~~~~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~-~~l~-~~~~v~~~P 85 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIK---QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES-PDIA-KECEVTAMP 85 (114)
T ss_dssp GSCBCCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred heeecCCHHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHCCCCccc
Confidence 4445544 66777776 689999999999999999999999999999975 99999999999 9999 999999999
Q ss_pred EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.| .. .++|.++|+++
T Consensus 86 t~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 114 (114)
T 2oe3_A 86 TFVLGKDGQL-IGKIIG-AN-PTALEKGIKDL 114 (114)
T ss_dssp EEEEEETTEE-EEEEES-SC-HHHHHHHHHTC
T ss_pred EEEEEeCCeE-EEEEeC-CC-HHHHHHHHHhC
Confidence 9999988873 345566 45 99999999864
No 77
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.69 E-value=4.5e-17 Score=138.66 Aligned_cols=104 Identities=18% Similarity=0.358 Sum_probs=90.3
Q ss_pred CCeeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 352 QNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 352 ~~v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
..+..+++ ++|++++. .++++||+||++||++|+.+.|.|+++++.+++.++.|+.||++.+ ++++ ++|+|.++
T Consensus 15 ~~~~~i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~-~~~~-~~~~v~~~ 89 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ-SQIA-QEVGIRAM 89 (121)
T ss_dssp CCEEECCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC-HHHH-HHHTCCSS
T ss_pred cceEEcCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC-HHHH-HHcCCCcc
Confidence 46777765 88999874 7899999999999999999999999999988763499999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 90 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 90 PTFVFFKNGQK-IDTVVG-A-DPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred cEEEEEECCeE-EeeEcC-C-CHHHHHHHHHHh
Confidence 99999998873 345555 5 999999999876
No 78
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.69 E-value=9.9e-17 Score=141.00 Aligned_cols=102 Identities=13% Similarity=0.187 Sum_probs=84.0
Q ss_pred CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEe
Q 012424 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP 437 (464)
Q Consensus 358 ~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~ 437 (464)
+.++|++.+. ...++++||+|||+||++|+.+.|.|+++++.+.+ ++.|++||++.+ ++++ ++|+|.++||+++|+
T Consensus 10 ~~~~~~~~v~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~~~-~~~~i~~~Pt~~~~~ 85 (142)
T 1qgv_A 10 NGWQVDQAIL-SEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV-PDFN-KMYELYDPCTVMFFF 85 (142)
T ss_dssp SHHHHHHHHH-TCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TSSCSCSSCEEEEEE
T ss_pred CHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC-HHHH-HHcCCCCCCEEEEEE
Confidence 4678887664 12579999999999999999999999999999976 699999999999 8999 999999999999999
Q ss_pred CCCCCee--------ecCCCCCCHHHHHHHHHHh
Q 012424 438 KHSSKPI--------KYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 438 ~g~~~~~--------~y~gg~~~~e~L~~fI~~l 463 (464)
+|+.... ...|...+.++|.++|+++
T Consensus 86 ~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 86 RNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp TTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 9884221 2334222588999998864
No 79
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.69 E-value=5.9e-17 Score=163.36 Aligned_cols=104 Identities=13% Similarity=0.183 Sum_probs=95.0
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHH-------HHHHHHHhcCCCeEEEEEEcCCCcHHHHHH
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGS-------YVELADKLAGNGVKVGKFRADGDQKEYAKQ 423 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~-------~~~la~~~~~~~v~~~~Id~d~~~~~l~~~ 423 (464)
.+.|++|++++|++.+. .++++||+||||||+ |+.+.|. |+++++.+++.++.|++|||+.+ +++| +
T Consensus 10 ~~~v~~l~~~~f~~~i~---~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~-~~l~-~ 83 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLK---KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE-AKLA-K 83 (350)
T ss_dssp CCCCEEECHHHHHHHHT---TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT-HHHH-H
T ss_pred CCccEECCHHHHHHHHh---hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC-HHHH-H
Confidence 35799999999999886 689999999999999 9999888 99999999865699999999999 9999 9
Q ss_pred cCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 424 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 424 ~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|+|.++||+++|++|+ ...|.| .++.+.|.+||++.
T Consensus 84 ~~~v~~~Pt~~~~~~g~--~~~~~G-~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 84 KLGFDEEGSLYVLKGDR--TIEFDG-EFAADVLVEFLLDL 120 (350)
T ss_dssp HHTCCSTTEEEEEETTE--EEEECS-CCCHHHHHHHHHTT
T ss_pred hcCCCccceEEEEECCc--EEEecC-CCCHHHHHHHHHHh
Confidence 99999999999999998 778988 69999999999864
No 80
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.69 E-value=4.1e-17 Score=141.61 Aligned_cols=108 Identities=9% Similarity=0.202 Sum_probs=89.8
Q ss_pred ccCCCCeeecCc-chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCC
Q 012424 348 IFNSQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQ 426 (464)
Q Consensus 348 ~~~~~~v~~L~~-~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~ 426 (464)
....+.++++++ ++|++++. ...++++||+|||+||++|+.+.|.|+++++.+ ++.|+.||++.+ .+++ ++|+
T Consensus 16 ~~~~~~v~~l~~~~~~~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~-~~l~-~~~~ 89 (133)
T 3cxg_A 16 FQGQSIYIELKNTGSLNQVFS-STQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIH-PKLN-DQHN 89 (133)
T ss_dssp EETTEEEEECCCTTHHHHHHT-C-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTC-HHHH-HHTT
T ss_pred ccCCccEEEecChhHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccch-HHHH-HhcC
Confidence 344567888885 88988876 334689999999999999999999999998877 499999999999 9999 9999
Q ss_pred CCCCCEEEEEe--CCCCC-eeecCCCCCCHHHHHHHHHHh
Q 012424 427 LGSFPTILFFP--KHSSK-PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 I~~~PTi~lf~--~g~~~-~~~y~gg~~~~e~L~~fI~~l 463 (464)
|.++||+++|+ +|+.+ ...+.| . +.++|.++|+++
T Consensus 90 v~~~Pt~~~~~~~~g~g~~~~~~~G-~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 90 IKALPTFEFYFNLNNEWVLVHTVEG-A-NQNDIEKAFQKY 127 (133)
T ss_dssp CCSSSEEEEEEEETTEEEEEEEEES-C-CHHHHHHHHHHH
T ss_pred CCCCCEEEEEEecCCCeEEEEEEcC-C-CHHHHHHHHHHH
Confidence 99999999996 77622 345555 4 899999999875
No 81
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.69 E-value=3.9e-17 Score=138.05 Aligned_cols=102 Identities=8% Similarity=0.219 Sum_probs=83.6
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc-----HHHHHHcCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ-----KEYAKQKLQ 426 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~-----~~l~~~~~~ 426 (464)
..+..++.++|++.+. .+++++|+||++||++|+.+.|.|+++++.++. .+ ..+|++... .+++ ++|+
T Consensus 12 ~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v--~~~~~~~~~~~~~~~~~~-~~~~ 84 (118)
T 1zma_A 12 KDLEVTTVVRAQEALD---KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HI--YFINSEEPSQLNDLQAFR-SRYG 84 (118)
T ss_dssp TTSEECCHHHHHHHHH---TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CC--EEEETTCGGGHHHHHHHH-HHHT
T ss_pred hhhhcCCHHHHHHHHh---CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eE--EEEECCCcCcHHHHHHHH-HHcC
Confidence 4678889999999886 678999999999999999999999999998864 34 445554331 5788 8999
Q ss_pred CCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 427 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 427 I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
|.++||+++|++|+. ...+.| ..+.++|.+||++
T Consensus 85 i~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~k 118 (118)
T 1zma_A 85 IPTVPGFVHITDGQI-NVRCDS-SMSAQEIKDFAGL 118 (118)
T ss_dssp CCSSCEEEEEETTEE-EEECCT-TCCHHHHHHHHTC
T ss_pred CCCCCeEEEEECCEE-EEEecC-CCCHHHHHHHhhC
Confidence 999999999998873 345555 7899999999863
No 82
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.69 E-value=3.7e-17 Score=142.11 Aligned_cols=101 Identities=12% Similarity=0.185 Sum_probs=89.1
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc---------CCCcHHHH
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA---------DGDQKEYA 421 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~---------d~~~~~l~ 421 (464)
++.+..++.++|++.+. . ++||+|||+||++|+.+.|.|+++++.++ +.|+.||+ +.+ ++++
T Consensus 15 ~~~v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~-~~l~ 85 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAA-RLEM 85 (135)
T ss_dssp TTEEEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHH-HHHH
T ss_pred cCceeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhh-HHHH
Confidence 45799999999999885 3 99999999999999999999999998884 89999999 767 8999
Q ss_pred HHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 422 KQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 422 ~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|+|.++||+++|++|+. ...+.| ..+.+.+.++++++
T Consensus 86 -~~~~v~~~Pt~~~~~~G~~-v~~~~G-~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 86 -NKAGVEGTPTLVFYKEGRI-VDKLVG-ATPWSLKVEKAREI 124 (135)
T ss_dssp -HHHTCCSSSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred -HHcCCceeCeEEEEcCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999999999999998873 345555 79999999999876
No 83
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.68 E-value=1e-16 Score=133.69 Aligned_cols=105 Identities=22% Similarity=0.300 Sum_probs=89.0
Q ss_pred CCeeec-CcchHHHHHhhc-CCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L-~~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
+.+..+ +.++|++.+... ..+++++|+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ ++++ ++|+|.+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~-~~~~-~~~~v~~ 79 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDEL-KAVA-EEWNVEA 79 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTC-HHHH-HHHHCSS
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEcccc-HHHH-HhCCCCc
Confidence 467777 668999988632 247899999999999999999999999999986 599999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 80 ~Pt~~~~~~G~~-~~~~~g--~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 80 MPTFIFLKDGKL-VDKTVG--ADKDGLPTLVAKH 110 (113)
T ss_dssp TTEEEEEETTEE-EEEEEC--CCTTHHHHHHHHH
T ss_pred ccEEEEEeCCEE-EEEEec--CCHHHHHHHHHHh
Confidence 999999988873 233444 5788999999875
No 84
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.68 E-value=8e-17 Score=137.64 Aligned_cols=89 Identities=13% Similarity=0.259 Sum_probs=79.0
Q ss_pred CCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEE--cCCCcHHHHHHcCCCCCCCEEEEEe-CCCCCeeec
Q 012424 370 HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR--ADGDQKEYAKQKLQLGSFPTILFFP-KHSSKPIKY 446 (464)
Q Consensus 370 ~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id--~d~~~~~l~~~~~~I~~~PTi~lf~-~g~~~~~~y 446 (464)
..++++||+||++||++|+.+.|.++++++.+++ ++.|+.|| ++.+ .+++ ++|+|.++||+++|+ +|+. ...+
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~-~~~~-~~~~v~~~Pt~~~~~~~G~~-~~~~ 99 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKN-IDLA-YKYDANIVPTTVFLDKEGNK-FYVH 99 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHH-HHHH-HHTTCCSSSEEEEECTTCCE-EEEE
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCch-HHHH-HHcCCcceeEEEEECCCCCE-EEEe
Confidence 3689999999999999999999999999999975 79999999 8888 8999 999999999999998 6663 3455
Q ss_pred CCCCCCHHHHHHHHHHh
Q 012424 447 PSERRDVDSLMAFVDAL 463 (464)
Q Consensus 447 ~gg~~~~e~L~~fI~~l 463 (464)
.| ..+.++|.++|+++
T Consensus 100 ~G-~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 100 QG-LMRKNNIETILNSL 115 (126)
T ss_dssp ES-CCCHHHHHHHHHHH
T ss_pred cC-CCCHHHHHHHHHHH
Confidence 56 78999999999875
No 85
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.68 E-value=2.2e-16 Score=132.61 Aligned_cols=105 Identities=18% Similarity=0.300 Sum_probs=89.0
Q ss_pred CCeeec-CcchHHHHHhhc-CCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L-~~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
+.++.+ +.++|++.+... ..++++||+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ ++++ ++|+|.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~-~~~~-~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDEL-KDVA-EAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccC-HHHH-HHcCCCc
Confidence 467778 568999887631 137899999999999999999999999999987 499999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 82 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 82 MPTFLFIKDGEK-VDSVVG--GRKDDIHTKIVAL 112 (118)
T ss_dssp BSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CcEEEEEeCCeE-EEEecC--CCHHHHHHHHHHH
Confidence 999999988873 334444 5889999999875
No 86
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.67 E-value=2.3e-16 Score=137.10 Aligned_cols=105 Identities=14% Similarity=0.240 Sum_probs=88.9
Q ss_pred CCeeecC-cchHHHHHhhc-CCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTLN-RTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L~-~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
.+++.++ .++|++.+... ..++++||+||++||++|+.+.|.|+++++.++ ++.|+.||++.+ ++++ ++|+|.+
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~-~~~~-~~~~v~~ 99 (139)
T 3d22_A 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDEL-SDFS-ASWEIKA 99 (139)
T ss_dssp TTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCE
T ss_pred CcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCccc-HHHH-HHcCCCc
Confidence 4566664 78999887532 258899999999999999999999999999985 599999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 100 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 100 TPTFFFLRDGQQ-VDKLVG-A-NKPELHKKITAI 130 (139)
T ss_dssp ESEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred ccEEEEEcCCeE-EEEEeC-C-CHHHHHHHHHHH
Confidence 999999988873 344555 4 889999999865
No 87
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.67 E-value=3.6e-16 Score=132.58 Aligned_cols=103 Identities=20% Similarity=0.341 Sum_probs=85.7
Q ss_pred CCeeec--CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTL--NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L--~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
..+..+ +.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+ + ++.|+.||++.+ ++++ ++|+|.+
T Consensus 3 ~~v~~~~g~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~-~~~~-~~~~i~~ 76 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIK--EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKN-GNAA-DAYGVSS 76 (118)
T ss_dssp CCSEEECSCHHHHHHHHH--HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEecCCHHHHHHHHH--hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCC-HHHH-HhcCCCC
Confidence 356777 5678885443 26899999999999999999999999999999 3 699999999999 9999 9999999
Q ss_pred CCEEEEEeC----CCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPK----HSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~----g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++ |+. ...+.| ...++|.+.|+++
T Consensus 77 ~Pt~~~~~~~~~~G~~-~~~~~G--~~~~~l~~~~~~~ 111 (118)
T 2f51_A 77 IPALFFVKKEGNEIKT-LDQFVG--ADVSRIKADIEKF 111 (118)
T ss_dssp SSEEEEEEEETTEEEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcceE-EEeecC--CCHHHHHHHHHHh
Confidence 999999987 652 344555 4567799998875
No 88
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=1.6e-16 Score=138.23 Aligned_cols=104 Identities=14% Similarity=0.137 Sum_probs=86.0
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
..+.+|+.++|++.+.....++++||+|||+||++|+.+.|.|+++++++. ++.|++||++.+ . ++|+|.++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~-~----~~~~i~~~P 82 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSC-I----EHYHDNCLP 82 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSS-C----SSCCSSCCS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcC-c----ccCCCCCCC
Confidence 468889999999987633345799999999999999999999999999986 499999999987 2 689999999
Q ss_pred EEEEEeCCCCCeeecCCC------CCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSE------RRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg------~~~~e~L~~fI~~l 463 (464)
|+++|++|+. ...+.|. ..+.++|.++|++.
T Consensus 83 t~~~~~~G~~-v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 83 TIFVYKNGQI-EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEEESSSSC-SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9999998874 3333341 13789999999864
No 89
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.67 E-value=4.1e-16 Score=149.06 Aligned_cols=107 Identities=19% Similarity=0.429 Sum_probs=91.4
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEc--CCCcHHHHHHcCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRA--DGDQKEYAKQKLQ 426 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Id~--d~~~~~l~~~~~~ 426 (464)
+..|.+|++++|++.+. +.+++++|+|||+||++|+.+.|.|+++++.+.+ .++.|+.||| +.+ +++| ++|+
T Consensus 11 ~~~v~~l~~~~f~~~i~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~-~~l~-~~~~ 86 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVL--GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN-SAVC-RDFN 86 (244)
T ss_dssp TSSSEEECTTTHHHHHS--SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT-HHHH-HHTT
T ss_pred CCCceeCChhhHHHHHh--hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh-HHHH-HHcC
Confidence 36799999999999874 4569999999999999999999999999999975 4699999999 556 9999 9999
Q ss_pred CCCCCEEEEEeCCCCC----eeecCCCCCCHHHHHHHHHHh
Q 012424 427 LGSFPTILFFPKHSSK----PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 I~~~PTi~lf~~g~~~----~~~y~gg~~~~e~L~~fI~~l 463 (464)
|.++||+++|++|+.. .+.+ +| .+.+.|.++|.++
T Consensus 87 v~~~Pt~~~~~~g~~~~~g~~~~~-~g-~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 87 IPGFPTVRFFXAFTXNGSGAVFPV-AG-ADVQTLRERLIDA 125 (244)
T ss_dssp CCSSSEEEEECTTCCSSSCEECCC-TT-CCHHHHHHHHHHH
T ss_pred CCccCEEEEEeCCCcCCCCeeEec-CC-CCHHHHHHHHHHH
Confidence 9999999999986542 3344 33 6999999999764
No 90
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.67 E-value=2.8e-16 Score=148.96 Aligned_cols=103 Identities=21% Similarity=0.528 Sum_probs=94.0
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC--CeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~--~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
.+..++.++|++++. .+++++|+||++||++|+.+.|.|.++++.+.+. ++.|++||++.+ ++++ ++|+|.++
T Consensus 131 ~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~ 205 (241)
T 3idv_A 131 VTLVLTKENFDEVVN---DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE-TDLA-KRFDVSGY 205 (241)
T ss_dssp SSEECCTTTHHHHHH---HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceeccHHHHHHhhc---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC-HHHH-HHcCCccc
Confidence 577889999999886 6789999999999999999999999999999762 499999999999 9999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+ .+.|.| .++.++|.+||++.
T Consensus 206 Pt~~~~~~g~--~~~~~g-~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 206 PTLKIFRKGR--PYDYNG-PREKYGIVDYMIEQ 235 (241)
T ss_dssp SEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred CEEEEEECCe--EEEecC-CCCHHHHHHHHHhh
Confidence 9999999987 677887 79999999999864
No 91
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.67 E-value=2.3e-16 Score=165.50 Aligned_cols=106 Identities=20% Similarity=0.395 Sum_probs=95.5
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
.|++|++++|++.+...+.++++||+||||||++|+.+.|.|+++++.+++ .+.|++|||+.+ +++| ++|+|.++||
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 78 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-IVPLAKVDCTAN-TNTC-NKYGVSGYPT 78 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCCEEEEETTTC-HHHH-HHTTCCEESE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC-ceEEEEEECCCC-HHHH-HhcCCCCCCE
Confidence 689999999999986222339999999999999999999999999999987 599999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...|.| .++.+.|.+||++.
T Consensus 79 l~~~~~g~~-~~~~~G-~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 79 LKIFRDGEE-AGAYDG-PRTADGIVSHLKKQ 107 (481)
T ss_dssp EEEEETTEE-EEECCS-CSSHHHHHHHHHHH
T ss_pred EEEEeCCce-eeeecC-ccCHHHHHHHHHhh
Confidence 999999863 678887 79999999999864
No 92
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.66 E-value=5.9e-17 Score=142.65 Aligned_cols=102 Identities=10% Similarity=0.135 Sum_probs=77.4
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCC--ChhHHhhHHHHHHHHHHhcCCCeE--EEEEEcCCCcHHHHHHcCCCC
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKLAGNGVK--VGKFRADGDQKEYAKQKLQLG 428 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~w--C~~C~~~~p~~~~la~~~~~~~v~--~~~Id~d~~~~~l~~~~~~I~ 428 (464)
.+..+++++|++++. .++.++|+||++| |++|+.+.|.|++++++| + ++. |++||+|.+ ++++ ++|+|.
T Consensus 18 ~~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~-~~la-~~~~V~ 90 (142)
T 2es7_A 18 GWQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQS-EAIG-DRFNVR 90 (142)
T ss_dssp TCEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHH-HHHH-HTTTCC
T ss_pred cCcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCC-HHHH-HhcCCC
Confidence 788999999999886 5667999999987 999999999999999999 5 688 999999999 9999 999999
Q ss_pred CCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 91 ~iPT~~~fk~G~~-v~~~~G-~~~~~~l~~~i~~~ 123 (142)
T 2es7_A 91 RFPATLVFTDGKL-RGALSG-IHPWAELLTLMRSI 123 (142)
T ss_dssp SSSEEEEESCC-----CEES-CCCHHHHHHHHHHH
T ss_pred cCCeEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999999988874 345555 68999999999864
No 93
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.65 E-value=7.6e-16 Score=155.45 Aligned_cols=107 Identities=23% Similarity=0.550 Sum_probs=94.2
Q ss_pred CCCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC-CeEEEEEEcCCCcHHHHHHcCCCC
Q 012424 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-GVKVGKFRADGDQKEYAKQKLQLG 428 (464)
Q Consensus 350 ~~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~-~v~~~~Id~d~~~~~l~~~~~~I~ 428 (464)
....|..|++++|++++. +.+++++|+||||||++|+.+.|.|+++++.+++. ++.|++||++.+ . + ++|+|.
T Consensus 247 ~~~~v~~l~~~~f~~~~~--~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~-~--~-~~~~v~ 320 (361)
T 3uem_A 247 DKQPVKVLVGKNFEDVAF--DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN-E--V-EAVKVH 320 (361)
T ss_dssp TTSSSEEECTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC-B--C-SSCCCC
T ss_pred ccCCcEEeecCchhhhcc--cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc-c--h-hhcCCc
Confidence 456799999999999873 46899999999999999999999999999999873 699999999998 4 6 799999
Q ss_pred CCCEEEEEeCC-CCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFPKH-SSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~~g-~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++||+++|++| +..+..|.| .++.++|.+||++-
T Consensus 321 ~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 321 SFPTLKFFPASADRTVIDYNG-ERTLDGFKKFLESG 355 (361)
T ss_dssp SSSEEEEECSSSSCCCEECCS-CSSHHHHHHHHTTT
T ss_pred ccCeEEEEECCCCcceeEecC-CCCHHHHHHHHHhc
Confidence 99999999766 334788988 69999999999763
No 94
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.64 E-value=1.3e-15 Score=146.16 Aligned_cols=101 Identities=17% Similarity=0.325 Sum_probs=90.0
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEe--cCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCC-----CcHHHHH
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLY--APWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADG-----DQKEYAK 422 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fy--a~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Id~d~-----~~~~l~~ 422 (464)
..|+.|++++|++++. .+++|||+|| ||||+ +.|.|+++++.+.+ .+|.|++|||+. + +++|
T Consensus 16 ~~v~~Lt~~nF~~vi~---~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n-~~la- 86 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVE---RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN-KALG- 86 (248)
T ss_dssp TTCEECCTTTHHHHHT---TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT-HHHH-
T ss_pred CCcEECCHHHHHHHHh---cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccccc-HHHH-
Confidence 4689999999999775 7889999999 99999 99999999999953 379999999998 7 9999
Q ss_pred HcCCCC--CCCEEEEEeCCC-CCeeec--CCCCCCHHHHHHHHHHh
Q 012424 423 QKLQLG--SFPTILFFPKHS-SKPIKY--PSERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~--~~PTi~lf~~g~-~~~~~y--~gg~~~~e~L~~fI~~l 463 (464)
++|+|. +|||+++|+ |+ ..+..| .| .++.++|.+||++.
T Consensus 87 ~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G-~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 87 DRYKVDDKNFPSIFLFK-GNADEYVQLPSHV-DVTLDNLKAFVSAN 130 (248)
T ss_dssp HHTTCCTTSCCEEEEES-SSSSSEEECCTTS-CCCHHHHHHHHHHH
T ss_pred HHhCCCcCCCCeEEEEe-CCcCcceeecccC-CCCHHHHHHHHHHh
Confidence 999999 999999999 87 346788 77 69999999999864
No 95
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.62 E-value=1.1e-15 Score=131.64 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=81.4
Q ss_pred chHHHHHhh-cCCCCcEEEEEecCCChhHHhhHHHHH--HHHHHhcCCCeEEEEEEc---CCCcHHHHHHcCCC---CCC
Q 012424 360 TGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYV--ELADKLAGNGVKVGKFRA---DGDQKEYAKQKLQL---GSF 430 (464)
Q Consensus 360 ~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~~--~la~~~~~~~v~~~~Id~---d~~~~~l~~~~~~I---~~~ 430 (464)
.++++.+.. ...++++||+||++||++|+.+.|.|+ ++++.+++ ++.|+.||+ +.+ .+++ ++|+| .++
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~-~~l~-~~~~v~~~~~~ 92 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRN-LELS-QAYGDPIQDGI 92 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSS-HHHH-HHTTCGGGGCS
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccch-HHHH-HHhCCccCCcc
Confidence 344444432 126899999999999999999999999 99999965 699999999 888 9999 99999 999
Q ss_pred CEEEEE-eCCCCCeeecCCC------CCCHHHHHHHHHHh
Q 012424 431 PTILFF-PKHSSKPIKYPSE------RRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf-~~g~~~~~~y~gg------~~~~e~L~~fI~~l 463 (464)
||+++| ++|+. ...+.|+ ..+.++|.+||+++
T Consensus 93 Pt~~~~d~~G~~-~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 93 PAVVVVNSDGKV-RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp SEEEEECTTSCE-EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred ceEEEECCCCCE-EEEecCCcccccccCCHHHHHHHHHHh
Confidence 999999 66662 3344332 47899999999986
No 96
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.62 E-value=3.5e-15 Score=142.50 Aligned_cols=102 Identities=17% Similarity=0.362 Sum_probs=90.9
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEec--CCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCC-----CcHHHHHH
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYA--PWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADG-----DQKEYAKQ 423 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya--~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~-----~~~~l~~~ 423 (464)
..|+.|++++|++++. .+++|||.||| |||+ +.|.|+++++.+.+ .+|.|++||+++ + +++| +
T Consensus 5 ~~v~~Lt~~nF~~~i~---~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~-~~l~-~ 75 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIP---KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLN-MELS-E 75 (240)
T ss_dssp TTCEECCTTHHHHHGG---GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCS-HHHH-H
T ss_pred CCceECCHHHHHHHHc---CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhh-HHHH-H
Confidence 5789999999999875 67899999999 9999 99999999999974 479999999654 6 9999 9
Q ss_pred cCCCC--CCCEEEEEeCCC-CCeeecCCCCCCHHHHHHHHHHh
Q 012424 424 KLQLG--SFPTILFFPKHS-SKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 424 ~~~I~--~~PTi~lf~~g~-~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|+|. +|||+++|++|+ ..+..|.| .++.++|.+||++.
T Consensus 76 ~~~V~~~~~PTl~~f~~G~~~~~~~y~G-~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 76 KYKLDKESYPVFYLFRDGDFENPVPYTG-AVKVGAIQRWLKGQ 117 (240)
T ss_dssp HTTCCGGGCSEEEEEETTCSSCCEECCS-CSCHHHHHHHHHHT
T ss_pred HcCCCCCCCCEEEEEeCCCcCcceeecC-CCCHHHHHHHHHHh
Confidence 99999 999999999998 45788987 79999999999864
No 97
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.62 E-value=2e-15 Score=141.94 Aligned_cols=103 Identities=11% Similarity=0.141 Sum_probs=88.0
Q ss_pred eeecCcchHHHHHhhcCCCCcE-EEEEecCCChhHHhhHHHHHHHHHHhcC---CCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 354 LVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQAMEGSYVELADKLAG---NGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~v-lV~Fya~wC~~C~~~~p~~~~la~~~~~---~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
+..+++++++.+.. .++++ +|+|||+||++|+.+.|.|+++++.+.+ .++.|+.||++.+ ++++ ++|+|.+
T Consensus 118 ~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~ 192 (226)
T 1a8l_A 118 ETNLMDETKQAIRN---IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY-PEWA-DQYNVMA 192 (226)
T ss_dssp CCCCCHHHHHHHTT---CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC-HHHH-HHTTCCS
T ss_pred CCCCCHHHHHHHHh---cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC-HHHH-HhCCCcc
Confidence 34567788888754 55666 9999999999999999999999999971 2699999999999 9999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 193 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 193 VPKIVIQVNGED-RVEFEG-AYPEKMFLEKLLSA 224 (226)
T ss_dssp SCEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred cCeEEEEeCCce-eEEEcC-CCCHHHHHHHHHHh
Confidence 999999998874 456666 79999999999875
No 98
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.41 E-value=3.6e-17 Score=134.15 Aligned_cols=104 Identities=25% Similarity=0.429 Sum_probs=90.1
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
.+.+|+.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+.+ ++.|+.+|++.+ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (106)
T 2yj7_A 2 SVIEVTDENFEQEVL--KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN-PNTA-AQYGIRSIPT 76 (106)
Confidence 467889999987653 3688999999999999999999999999999986 699999999999 8999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 77 LLLFKNGQV-VDRLVG-AQPKEALKERIDKH 105 (106)
Confidence 999987773 345555 68899999999864
No 99
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.61 E-value=2e-15 Score=130.75 Aligned_cols=101 Identities=20% Similarity=0.363 Sum_probs=83.0
Q ss_pred CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCC---cHHHHHHcCCCCCCC
Q 012424 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGD---QKEYAKQKLQLGSFP 431 (464)
Q Consensus 358 ~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d~~---~~~l~~~~~~I~~~P 431 (464)
+.++++..+.. ..++++||+||++||++|+.+.|.+ .++++.+++ +.|+.||++.+ +.+++ ++|+|.++|
T Consensus 18 ~~~~~~~~l~~-~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~~~l~-~~~~v~~~P 93 (134)
T 2fwh_A 18 TVDELNQALVE-AKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALL-KHLNVLGLP 93 (134)
T ss_dssp SHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHH-HHTTCCSSS
T ss_pred CHHHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchHHHHH-HHcCCCCCC
Confidence 45677777652 2489999999999999999999999 999999874 99999999542 27899 999999999
Q ss_pred EEEEE-eCCCCCe-eecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFF-PKHSSKP-IKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf-~~g~~~~-~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++| ++|+... ..+.| ..+.++|.++|+++
T Consensus 94 t~~~~d~~G~~v~~~~~~G-~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTG-FMDAETFSAHLRDR 126 (134)
T ss_dssp EEEEECTTSCBCGGGCBCS-CCCHHHHHHHHHHC
T ss_pred EEEEECCCCCEeeeeeeee-ccCHHHHHHHHHhc
Confidence 99999 6676311 35666 78999999999876
No 100
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=1.5e-15 Score=130.11 Aligned_cols=107 Identities=15% Similarity=0.253 Sum_probs=86.0
Q ss_pred CeeecCcchHHHHHhhc-CCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCC-CcHHHHHHcCCC
Q 012424 353 NLVTLNRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADG-DQKEYAKQKLQL 427 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d~-~~~~l~~~~~~I 427 (464)
..+.++..+|++.+... ..++++||+||++||++|+.+.|.+ .++.+.+.. ++.++.||++. .+.+++ ++|+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~-~~~~v 84 (130)
T 2kuc_A 7 DGIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELR-KKYGV 84 (130)
T ss_dssp CCCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHH-HHTTC
T ss_pred CCCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHH-HHcCC
Confidence 34556778888876432 2578999999999999999999999 778777765 68999999984 237899 99999
Q ss_pred CCCCEEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 428 GSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~~PTi~lf-~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++||+++| ++|+. ...+.| ..+.++|.++|+++
T Consensus 85 ~~~Pt~~~~d~~G~~-~~~~~G-~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 85 HAYPTLLFINSSGEV-VYRLVG-AEDAPELLKKVKLG 119 (130)
T ss_dssp CSSCEEEEECTTSCE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcE-EEEecC-CCCHHHHHHHHHHH
Confidence 999999999 46653 445656 68999999999875
No 101
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.60 E-value=2.2e-15 Score=128.69 Aligned_cols=103 Identities=12% Similarity=0.242 Sum_probs=86.5
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecC-------CChhHHhhHHHHHHHHHHhcCCCeEEEEEEc-------CCCcH
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAP-------WCQFCQAMEGSYVELADKLAGNGVKVGKFRA-------DGDQK 418 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~-------wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~-------d~~~~ 418 (464)
.+...+.++|++.+. ...+++++|+|||+ ||++|+.+.|.|+++++.+++ ++.|+.||+ +.+ .
T Consensus 6 ~v~~~~~~~~~~~~~-~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~-~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVE-QHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPN-N 82 (123)
T ss_dssp EEEEESHHHHHHHHH-TTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTT-C
T ss_pred eEEeccHHHHHHHHH-HhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchh-H
Confidence 355667889999886 22489999999999 999999999999999999876 799999999 677 8
Q ss_pred HHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 419 EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 419 ~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
+++ ++|+|.++||+++|+++.. ...+.+ .+.+.|.+||++
T Consensus 83 ~~~-~~~~i~~~Pt~~~~~~~~~-~~g~~~--~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFR-KNLKVTAVPTLLKYGTPQK-LVESEC--LQANLVEMLFSE 122 (123)
T ss_dssp HHH-HHHCCCSSSEEEETTSSCE-EEGGGG--GCHHHHHHHHHC
T ss_pred HHH-HHCCCCeeCEEEEEcCCce-Eecccc--CCHHHHHHHHhc
Confidence 999 8999999999999988653 344443 678899999874
No 102
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.59 E-value=9.4e-16 Score=144.51 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=88.7
Q ss_pred CCeeec-CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 352 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 352 ~~v~~L-~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
..|.++ +.++|.+.+.....+++|||+||++||++|+.+.|.|.++++.|. ++.|++||++ + ++++ .+|+|.++
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~-~~l~-~~~~i~~~ 173 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-N-TGAG-DRFSSDVL 173 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-H-HTCS-TTSCGGGC
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-c-HHHH-HHCCCCCC
Confidence 458888 889999988643445899999999999999999999999999996 5999999999 6 8899 89999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCC-------HHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRD-------VDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~-------~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| ..+ .++|..||.+.
T Consensus 174 PTl~~~~~G~~-v~~~~G-~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 174 PTLLVYKGGEL-ISNFIS-VAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SEEEEEETTEE-EEEETT-GGGGSCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeC-CcccCcccCCHHHHHHHHHHc
Confidence 99999998874 334554 333 58999999864
No 103
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.59 E-value=7.6e-15 Score=153.86 Aligned_cols=108 Identities=24% Similarity=0.589 Sum_probs=96.2
Q ss_pred CCCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC-CeEEEEEEcCCCcHHHHHHcCCCC
Q 012424 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-GVKVGKFRADGDQKEYAKQKLQLG 428 (464)
Q Consensus 350 ~~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~-~v~~~~Id~d~~~~~l~~~~~~I~ 428 (464)
....|..++.++|++++. +.++++||+|||+||++|+.+.|.|+++++.+++. ++.|++||++.+ +++ ++|+|.
T Consensus 350 ~~~~v~~~~~~~~~~~~~--~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~--~~~-~~~~v~ 424 (481)
T 3f8u_A 350 NDGPVKVVVAENFDEIVN--NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN--DVP-SPYEVR 424 (481)
T ss_dssp CCSSSEEECTTTHHHHHT--CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS--CCC-TTCCCC
T ss_pred CCCCeEEecccCHHHHhh--cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch--hhH-hhCCCc
Confidence 345788999999999875 35899999999999999999999999999999873 799999999988 788 899999
Q ss_pred CCCEEEEEeCCCCC-eeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~~g~~~-~~~y~gg~~~~e~L~~fI~~l 463 (464)
++||+++|++|+.. +..|.| .++.++|.+||++.
T Consensus 425 ~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 425 GFPTIYFSPANKKLNPKKYEG-GRELSDFISYLQRE 459 (481)
T ss_dssp SSSEEEEECTTCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred ccCEEEEEeCCCeEeeeEeCC-CCCHHHHHHHHHHh
Confidence 99999999988863 788888 69999999999864
No 104
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.58 E-value=9.6e-15 Score=154.53 Aligned_cols=107 Identities=17% Similarity=0.361 Sum_probs=92.0
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCC--CcHHHHHHcCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADG--DQKEYAKQKLQL 427 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Id~d~--~~~~l~~~~~~I 427 (464)
..|.+|++++|++.+. +.++++||+|||+||++|+.+.|.|+++++.+++ .++.|++|||+. + .+++ ++|+|
T Consensus 12 ~~V~~Lt~~~f~~~v~--~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~-~~l~-~~~~V 87 (519)
T 3t58_A 12 DPLTLLDADSVRPTVL--GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN-SAVC-REFNI 87 (519)
T ss_dssp SSSEEECTTTHHHHHS--SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG-HHHH-HHTTC
T ss_pred CCcEECChHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc-HHHH-HHcCC
Confidence 5799999999999774 3579999999999999999999999999999976 369999999964 5 8999 99999
Q ss_pred CCCCEEEEEeCCCC---CeeecCCCCCCHHHHHHHHHHh
Q 012424 428 GSFPTILFFPKHSS---KPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~~PTi~lf~~g~~---~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++||+++|++|+. ....+.| .++.++|.++|+++
T Consensus 88 ~~~PTl~~f~~g~~~G~~~~~~~g-~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 88 AGFPTVRFFQAFTKNGSGATLPGA-GANVQTLRMRLIDA 125 (519)
T ss_dssp CSBSEEEEECTTCCSCCCEEECCS-SCCHHHHHHHHHHH
T ss_pred cccCEEEEEcCcccCCCceeEecC-CCCHHHHHHHHHHH
Confidence 99999999986543 2345555 48999999999764
No 105
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.58 E-value=5.2e-15 Score=128.30 Aligned_cols=102 Identities=14% Similarity=0.225 Sum_probs=89.5
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC--C
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS--F 430 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~--~ 430 (464)
-|.++|.++|++++. .+.+++|+|||+ |++|+.+.|.|+++|++|++ ++.|+++|.+++ +.++ ++|+|.+ +
T Consensus 7 lv~~~t~~~f~~~~~---~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~-~~~a-~~~gi~~~~i 79 (133)
T 2djk_A 7 LIGEIGPETYSDYMS---AGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAF-GAHA-GNLNLKTDKF 79 (133)
T ss_dssp CSEECCHHHHHHHHH---TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTT-GGGT-TTTTCCSSSS
T ss_pred ceeccChHHHHHHhc---CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHh-HHHH-HHcCCCcccC
Confidence 478899999998865 678999999999 89999999999999999988 799999999999 8899 9999999 9
Q ss_pred CEEEEEeC--CCCCeeecC-CCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPK--HSSKPIKYP-SERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~--g~~~~~~y~-gg~~~~e~L~~fI~~l 463 (464)
||+++|++ |+ .+.+. .|..+.++|.+||+++
T Consensus 80 Ptl~i~~~~~g~--~~~~~~~g~~~~~~l~~fi~~~ 113 (133)
T 2djk_A 80 PAFAIQEVAKNQ--KFPFDQEKEITFEAIKAFVDDF 113 (133)
T ss_dssp SEEEEECTTTCC--BCCCCSSSCCCHHHHHHHHHHH
T ss_pred CEEEEEecCcCc--ccCCCCccccCHHHHHHHHHHH
Confidence 99999987 54 34443 1378999999999865
No 106
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.58 E-value=4.1e-15 Score=165.12 Aligned_cols=105 Identities=22% Similarity=0.482 Sum_probs=89.0
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
...|+.|+.++|++.+. .++++||+||||||++|+.+.|.|+++++.+.+ .+.|++|||+.+ +++| ++|+|.++
T Consensus 115 ~~~v~~l~~~~f~~~i~---~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 188 (780)
T 3apo_A 115 DPEIITLERREFDAAVN---SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNSY 188 (780)
T ss_dssp CTTEEECCHHHHHHHHT---SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-SSCC---------
T ss_pred CcceeeechHhHHhhhc---CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcC-ceEEEEEeCCCc-HHHH-HHcCCcee
Confidence 35799999999999985 789999999999999999999999999999987 699999999999 8999 99999999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...|.| .++.+.|.+||.+.
T Consensus 189 Pt~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 219 (780)
T 3apo_A 189 PSLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 219 (780)
T ss_dssp CEEEEECTTSC-CEECCS-CSCHHHHHHHHHTT
T ss_pred eeEEEEeCCcE-eeEecC-CCCHHHHHHHHHHh
Confidence 99999999885 578887 79999999999764
No 107
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.57 E-value=3.5e-16 Score=133.82 Aligned_cols=105 Identities=21% Similarity=0.313 Sum_probs=88.3
Q ss_pred CCeeec-CcchHHHHHhhc-CCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L-~~~~f~~~i~~~-~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
..+.++ +.++|++.+... ..++++||+||++||++|+.+.|.|+++++.+. ++.|+.||++.+ ++++ ++|+|.+
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~-~~~~-~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDEL-KEVA-EKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTS-GGGH-HHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccch-HHHH-HHcCCCc
Confidence 467778 458899887632 257899999999999999999999999999986 499999999999 8999 9999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 90 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 90 MPTFLFIKDGAE-ADKVVG--ARKDDLQNTIVKH 120 (130)
T ss_dssp SCCCCBCTTTTC-CBCCCT--TCTTTHHHHHHHH
T ss_pred cceEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 999999988873 333444 5778899998865
No 108
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.57 E-value=4.8e-15 Score=123.95 Aligned_cols=103 Identities=11% Similarity=0.108 Sum_probs=84.3
Q ss_pred cCCCCeeec-CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHH
Q 012424 349 FNSQNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQ 423 (464)
Q Consensus 349 ~~~~~v~~L-~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~----l~~~ 423 (464)
+-..+...| +.++|+++++ .+++++|+|+|+|||+|+.+.|.|+++++. . ++.|++||++++ ++ ++ .
T Consensus 3 ~~~~~~~~i~s~e~f~~ii~---~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdVde~-r~~Sn~IA-~ 74 (112)
T 3iv4_A 3 YFQGVAIKLSSIDQFEQVIE---ENKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIVQQE-RDLSDYIA-K 74 (112)
T ss_dssp CGGGCEEECCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEGGGG-HHHHHHHH-H
T ss_pred chhcceeecCCHHHHHHHHh---cCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEeecC-chhhHHHH-H
Confidence 334466677 4578999887 589999999999999999999999999985 3 699999999998 66 78 9
Q ss_pred cCCCC-CCCEEEEEeCCCCCeeecCCCCCCHHHHHHHH
Q 012424 424 KLQLG-SFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 460 (464)
Q Consensus 424 ~~~I~-~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI 460 (464)
+|+|+ ..||+++|++|+.....-. +..+.+.|.+.+
T Consensus 75 ~~~V~h~sPq~il~k~G~~v~~~SH-~~I~~~~l~~~~ 111 (112)
T 3iv4_A 75 KTNVKHESPQAFYFVNGEMVWNRDH-GDINVSSLAQAE 111 (112)
T ss_dssp HHTCCCCSSEEEEEETTEEEEEEEG-GGCSHHHHHHHT
T ss_pred HhCCccCCCeEEEEECCEEEEEeec-cccCHHHHHHhh
Confidence 99999 5999999999995322222 368888888765
No 109
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.57 E-value=4.3e-15 Score=142.27 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=87.6
Q ss_pred CCeeec-CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 352 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 352 ~~v~~L-~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
+.|..| +.++|.+.+.....+++|||+|||+||++|+.+.|.|.+|++.|.+ +.|++||++. .+++ .+|+|.++
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~--~~l~-~~~~I~~~ 186 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASN--TGAG-DRFSSDVL 186 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHH--HCCT-TSSCTTTC
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCc--HHHH-HHCCCCCC
Confidence 368888 7899999886333578999999999999999999999999999975 9999999986 4678 89999999
Q ss_pred CEEEEEeCCCCCeeecCC------CCCCHHHHHHHHHHh
Q 012424 431 PTILFFPKHSSKPIKYPS------ERRDVDSLMAFVDAL 463 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~g------g~~~~e~L~~fI~~l 463 (464)
||+++|++|+. ...+.| ..++.+.|..||.+.
T Consensus 187 PTll~~~~G~~-v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 187 PTLLVYKGGEL-LSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SEEEEEETTEE-EEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeCCcccccccccHHHHHHHHHHc
Confidence 99999998874 222322 235788999999764
No 110
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.56 E-value=5e-15 Score=116.90 Aligned_cols=82 Identities=16% Similarity=0.293 Sum_probs=73.9
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCC
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 452 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~ 452 (464)
.+++|+||++||++|+.+.|.++++++++++ ++.|+.+|++.+ ++++ ++|+|.++||+++ +|+ . .+.| ..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMEN-PQKA-MEYGIMAVPTIVI--NGD--V-EFIG-APT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSS-CCTT-TSTTTCCSSEEEE--TTE--E-ECCS-SSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCC-HHHH-HHCCCcccCEEEE--CCE--E-eeec-CCC
Confidence 5689999999999999999999999999986 799999999999 8999 9999999999998 666 4 6666 679
Q ss_pred HHHHHHHHHHh
Q 012424 453 VDSLMAFVDAL 463 (464)
Q Consensus 453 ~e~L~~fI~~l 463 (464)
.++|.++|+++
T Consensus 74 ~~~l~~~l~~~ 84 (85)
T 1fo5_A 74 KEALVEAIKKR 84 (85)
T ss_dssp SHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 111
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.55 E-value=2e-14 Score=151.62 Aligned_cols=106 Identities=25% Similarity=0.582 Sum_probs=91.8
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc-C-CCeEEEEEEcCCCcHHHHHHcCCCC
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA-G-NGVKVGKFRADGDQKEYAKQKLQLG 428 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~-~-~~v~~~~Id~d~~~~~l~~~~~~I~ 428 (464)
...|..|++++|+.++. +.++++||+||||||++|+.+.|.|+++++.+. + .++.++++|++.+ ++. . |+|.
T Consensus 357 ~~~v~~l~~~~f~~~v~--~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~--~~~-~-~~v~ 430 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVN--DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEN--DVR-G-VVIE 430 (504)
T ss_dssp SCSEEEECTTTHHHHHH--CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGC--CCS-S-CCCS
T ss_pred cccceecccccHHHhhc--cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcc--ccc-c-CCce
Confidence 45799999999999874 468999999999999999999999999999987 2 3699999999988 344 4 9999
Q ss_pred CCCEEEEEeCCCC-CeeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFPKHSS-KPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~~g~~-~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++||+++|++|+. ....|.| .++.++|.+||++.
T Consensus 431 ~~Pt~~~~~~G~~~~~~~~~G-~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 431 GYPTIVLYPGGKKSESVVYQG-SRSLDSLFDFIKEN 465 (504)
T ss_dssp SSSEEEEECCTTSCCCCBCCS-CCCHHHHHHHHHHH
T ss_pred ecCeEEEEeCCceecceEecC-CCCHHHHHHHHHhc
Confidence 9999999988864 2677877 69999999999864
No 112
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.55 E-value=1.6e-15 Score=157.37 Aligned_cols=95 Identities=16% Similarity=0.363 Sum_probs=81.3
Q ss_pred CCCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC-------CeEEEEEEcCCCcHHHHHH
Q 012424 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-------GVKVGKFRADGDQKEYAKQ 423 (464)
Q Consensus 351 ~~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~-------~v~~~~Id~d~~~~~l~~~ 423 (464)
...|++|+.++|++++. .+.+++|||+|||+||++|+.+.|.|+++++.+.+. .+.|++||++.+ ++++ +
T Consensus 22 ~~~V~~Lt~~~F~~~l~-~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~-~~la-~ 98 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHR-VAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE-VDLC-R 98 (470)
T ss_dssp CTTEEECSCSCGGGTCT-TGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC-HHHH-H
T ss_pred CCCcEECCHHHHHHHHH-hCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC-HHHH-H
Confidence 46899999999998875 234589999999999999999999999999999741 499999999999 9999 9
Q ss_pred cCCCCCCCEEEEEeCCC-CCeeecCC
Q 012424 424 KLQLGSFPTILFFPKHS-SKPIKYPS 448 (464)
Q Consensus 424 ~~~I~~~PTi~lf~~g~-~~~~~y~g 448 (464)
+|+|.++||+++|++|+ .....|.|
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G 124 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECG 124 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCC
T ss_pred HcCCCccCeEEEEECCCceEEEEeeC
Confidence 99999999999997554 23456665
No 113
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.54 E-value=5.8e-15 Score=116.51 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=72.9
Q ss_pred cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCH
Q 012424 374 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 453 (464)
Q Consensus 374 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~ 453 (464)
..+|+||++||++|+.+.|.++++++++++ ++.|+.+|++.+ ++++ ++|+|.++||+++ +|+ . .+.| ..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~~ 73 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVD-REKA-IEYGLMAVPAIAI--NGV--V-RFVG-APSR 73 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTC-GGGG-GGTCSSCSSEEEE--TTT--E-EEEC-SSCC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhCCceeeCEEEE--CCE--E-EEcc-CCCH
Confidence 468999999999999999999999999986 799999999999 8999 9999999999998 776 4 5666 5789
Q ss_pred HHHHHHHHHh
Q 012424 454 DSLMAFVDAL 463 (464)
Q Consensus 454 e~L~~fI~~l 463 (464)
++|.++|+++
T Consensus 74 ~~l~~~l~~~ 83 (85)
T 1nho_A 74 EELFEAINDE 83 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 114
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.54 E-value=1.3e-14 Score=130.94 Aligned_cols=106 Identities=11% Similarity=0.134 Sum_probs=80.3
Q ss_pred CeeecCcchHHHHHhh-cCCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCCcHHH--------
Q 012424 353 NLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQKEY-------- 420 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d~~~~~l-------- 420 (464)
....++..+|++.+.. ..+++++||+|||+||++|+.|++.+ .++.+.+++ ++.|+.||++.+ .++
T Consensus 27 ~~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~-~~~~~~~~~~~ 104 (172)
T 3f9u_A 27 NEVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK-TPLTEPVKIME 104 (172)
T ss_dssp -CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC-CEEEEEEEEEE
T ss_pred cccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc-cccchhhhhhh
Confidence 4455667778776642 23689999999999999999986655 666666665 699999999877 433
Q ss_pred ------------------HHHcCCCCCCCEEEEE-eCCCCCeeecCCCCCC-HHHHHHHHHHh
Q 012424 421 ------------------AKQKLQLGSFPTILFF-PKHSSKPIKYPSERRD-VDSLMAFVDAL 463 (464)
Q Consensus 421 ------------------~~~~~~I~~~PTi~lf-~~g~~~~~~y~gg~~~-~e~L~~fI~~l 463 (464)
+ ++|+|.++||+++| ++|+. ...+.| ..+ .++|.++|+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~Pt~~lid~~G~~-~~~~~G-~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 105 NGTERTLRTVGDKWSYLQR-VKFGANAQPFYVLIDNEGNP-LNKSYA-YDEDISKYINFLQTG 164 (172)
T ss_dssp TTEEEEEEEHHHHHHHHHH-HHHSCCCSSEEEEECTTSCB-SSCCBC-SCCCHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhhHHHH-HHcCCCCcceEEEECCCCCE-EeeccC-CCCCHHHHHHHHHHH
Confidence 6 78999999999999 56653 344445 566 99999998764
No 115
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.51 E-value=4.8e-14 Score=132.96 Aligned_cols=98 Identities=14% Similarity=0.258 Sum_probs=84.9
Q ss_pred eeecCcchHHHHHhhcCCCCcE-EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 354 LVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~v-lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
+..|++++|+.++. .++++ ||+||++||++|+.+.|.|+++++.+. ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 120 ~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 192 (229)
T 2ywm_A 120 KPQLSEKTLELLQV---VDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASEN-QDLA-EQFQVVGVPK 192 (229)
T ss_dssp CCSCCHHHHHHHTT---CCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGGC-HHHH-HHTTCCSSSE
T ss_pred ccCCCHHHHHHHHh---cCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCCC-HHHH-HHcCCcccCE
Confidence 56678889998764 45555 889999999999999999999999984 699999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++ +|+ ...+.| .++.++|.+||+++
T Consensus 193 ~~~--~G~--~~~~~G-~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 193 IVI--NKG--VAEFVG-AQPENAFLGYIMAV 218 (229)
T ss_dssp EEE--GGG--TEEEES-CCCHHHHHHHHHHH
T ss_pred EEE--CCE--EEEeeC-CCCHHHHHHHHHHH
Confidence 988 666 456777 79999999999764
No 116
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.21 E-value=3.5e-15 Score=127.95 Aligned_cols=89 Identities=16% Similarity=0.251 Sum_probs=74.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCCCCEEEEE--eCCCCC-
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILFF--PKHSSK- 442 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d--~~~~~l~~~~~~I~~~PTi~lf--~~g~~~- 442 (464)
.++++||+||++||++|+.+.|.+ +++++.+++ ++.|+.||++ .+ .+++ ++|+|.++||+++| ++|+..
T Consensus 18 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 18 HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEG-QELA-RRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 688999999999999999999999 899988876 6999999995 44 7899 99999999999999 445521
Q ss_pred eeecCCCCCCHHHHHHHHHHh
Q 012424 443 PIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 443 ~~~y~gg~~~~e~L~~fI~~l 463 (464)
...+.| ..+.++|.++|+++
T Consensus 95 ~~~~~G-~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 95 VGRLFG-SRPRAEFLKELRQV 114 (130)
Confidence 234555 68888999998765
No 117
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.47 E-value=1.6e-13 Score=121.89 Aligned_cols=88 Identities=13% Similarity=0.296 Sum_probs=73.3
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCCc----------HHHHHHcCCCCCCCEEEEE
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ----------KEYAKQKLQLGSFPTILFF 436 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d~~~----------~~l~~~~~~I~~~PTi~lf 436 (464)
.++++||+|| |+||++|+.+.|.+ .++.+.+.. ++.++.||++... .+++ ++|+|.++||+++|
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~-~~~~v~~~Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELK-AQYKVTGFPELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHH-HHTTCCSSSEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHH-HHcCCCCCCEEEEE
Confidence 5899999999 99999999999999 788776644 6999999998751 4889 89999999999999
Q ss_pred -eCCCCCeeecCCCCC--CHHHHHHHHHHh
Q 012424 437 -PKHSSKPIKYPSERR--DVDSLMAFVDAL 463 (464)
Q Consensus 437 -~~g~~~~~~y~gg~~--~~e~L~~fI~~l 463 (464)
++|+. ...+ | .. +.++|.++|+++
T Consensus 124 d~~G~~-~~~~-G-~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 124 DAEGKQ-LARM-G-FEPGGGAAYVSKVKSA 150 (154)
T ss_dssp CTTCCE-EEEE-C-CCTTCHHHHHHHHHHH
T ss_pred cCCCCE-EEEe-c-CCCCCHHHHHHHHHHH
Confidence 56653 3444 5 56 899999999875
No 118
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.47 E-value=2.9e-13 Score=120.16 Aligned_cols=90 Identities=13% Similarity=0.269 Sum_probs=76.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcC-------------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKL------------------------- 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~------------------------- 425 (464)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++.+ .+.. ++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ-LPNV-KNYMKTQGIIYPVMMATPELIRAFNGYI 110 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC-HHHH-HHHHHHHTCCSCEEECCHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HHHHHHcCCCCceEecCHHHHHHHhhhh
Confidence 5789999999999999999999999999999876799999999987 6655 555
Q ss_pred --CCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 --QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 --~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|.++|+++++..++.....+.| ..+.++|.++|+++
T Consensus 111 ~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 111 DGGITGIPTSFVIDASGNVSGVIVG-PRSKADFDRIVKMA 149 (165)
T ss_dssp TTCSCSSSEEEEECTTSBEEEEECS-CCCHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 89999999999544433455555 68999999999875
No 119
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.46 E-value=2.8e-13 Score=116.00 Aligned_cols=86 Identities=21% Similarity=0.363 Sum_probs=75.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC----------------------CcHHHHHHcCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------DQKEYAKQKLQLG 428 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~----------------------~~~~l~~~~~~I~ 428 (464)
.++++||+||++||++|+.+.|.+.++.++++ ++.|+.|+++. + .+++ +.|+|.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD-GVIW-ARYNVP 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT-SHHH-HHTTCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc-hhHH-HhcCCC
Confidence 57899999999999999999999999999997 59999999987 4 6888 899999
Q ss_pred CCCEEEEEe-CCCCCeeecC---CCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFP-KHSSKPIKYP---SERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~-~g~~~~~~y~---gg~~~~e~L~~fI~~l 463 (464)
++|+++++. +|+ ...+. | ..+.++|.++|+++
T Consensus 99 ~~P~~~lid~~G~--i~~~~~~~g-~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 99 WQPAFVFYRADGT--STFVNNPTA-AMSQDELSGRVAAL 134 (136)
T ss_dssp SSSEEEEECTTSC--EEEECCSSS-CCCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCc--EEEEEcCCC-ccCHHHHHHHHHHH
Confidence 999999995 555 33566 5 68999999999876
No 120
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.46 E-value=2.8e-14 Score=128.28 Aligned_cols=97 Identities=18% Similarity=0.342 Sum_probs=74.7
Q ss_pred chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-HHHHcCCC--CCCCEEEEE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-YAKQKLQL--GSFPTILFF 436 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~-l~~~~~~I--~~~PTi~lf 436 (464)
+.|+.... .++++||+|||+||++|+.+.|.|.++++.+.. ++.|+.||++.+ .+ ++ ..|++ .++||++||
T Consensus 37 ~~~~~~~~---~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~-~~~~~-~~~~~~~~~~Pt~~~~ 110 (164)
T 1sen_A 37 DGKKEAAA---SGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDE-EEPKD-EDFSPDGGYIPRILFL 110 (164)
T ss_dssp HHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGG-GSCSC-GGGCTTCSCSSEEEEE
T ss_pred HHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCC-chHHH-HHhcccCCcCCeEEEE
Confidence 45555544 689999999999999999999999998776654 477888888877 55 77 78888 669999999
Q ss_pred -eCCCCCeeecCCC---------CCCHHHHHHHHHHh
Q 012424 437 -PKHSSKPIKYPSE---------RRDVDSLMAFVDAL 463 (464)
Q Consensus 437 -~~g~~~~~~y~gg---------~~~~e~L~~fI~~l 463 (464)
++|+. ...+.|. ..+.++|.++|+++
T Consensus 111 d~~G~~-~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 111 DPSGKV-HPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp CTTSCB-CTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred CCCCCE-EEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 57763 2233341 26889999988764
No 121
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.46 E-value=5.3e-13 Score=115.79 Aligned_cols=102 Identities=16% Similarity=0.195 Sum_probs=81.5
Q ss_pred eecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--------------------
Q 012424 355 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-------------------- 414 (464)
Q Consensus 355 ~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d-------------------- 414 (464)
..++++.+..... .++++||+||++||++|+.+.|.+.++.+++++ .+.|+.|+++
T Consensus 15 ~~~~g~~~~~~~~---~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 90 (148)
T 2b5x_A 15 AWLNGEVTREQLI---GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-QLNVVAVHMPRSEDDLDPGKIKETAAEHDI 90 (148)
T ss_dssp EEESCCCCHHHHT---TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEECCCSTTTSSHHHHHHHHHHTTC
T ss_pred ccccCcccchhhc---CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEEcCCCccccCHHHHHHHHHHcCC
Confidence 4556666655433 679999999999999999999999999999987 4999999964
Q ss_pred -------CCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 415 -------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 415 -------~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.+ .+++ +.|+|.++||++++..++.....+.| ..+.++|.++|+++
T Consensus 91 ~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 91 TQPIFVDSD-HALT-DAFENEYVPAYYVFDKTGQLRHFQAG-GSGMKMLEKRVNRV 143 (148)
T ss_dssp CSCEEECSS-CHHH-HHTCCCCSSEEEEECTTCBEEEEEES-CSTTHHHHHHHHHH
T ss_pred CcceEECCc-hhHH-HHhCCCCCCEEEEECCCCcEEEEecC-CCCHHHHHHHHHHH
Confidence 34 6889 89999999999999544433444555 67889999999875
No 122
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.46 E-value=3.7e-13 Score=149.38 Aligned_cols=109 Identities=24% Similarity=0.480 Sum_probs=96.6
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
+.|..|+.++|++++.....++.+||.||+|||++|+.+.|.|+++++.+++ ++.|+.+||+.+ ..+| ++|+|.++|
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 619 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG-LINVGSVDCGQY-HSFC-TQENVQRYP 619 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-CeEEEEEECcch-HHHH-HHcCCCCCC
Confidence 5799999999999886333467899999999999999999999999999987 799999999999 8999 899999999
Q ss_pred EEEEEeCCCC---CeeecCCCCCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSS---KPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~---~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+++|+.|.. .++.|.|..++.++|.+||++.
T Consensus 620 ti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~ 654 (780)
T 3apo_A 620 EIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGF 654 (780)
T ss_dssp EEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTT
T ss_pred eEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhh
Confidence 9999988764 3677877468999999999864
No 123
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.46 E-value=3.5e-13 Score=118.44 Aligned_cols=91 Identities=14% Similarity=0.229 Sum_probs=76.8
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC-----------------------cHHHHHHcCC-
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD-----------------------QKEYAKQKLQ- 426 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~-----------------------~~~l~~~~~~- 426 (464)
+++++||+||++||++|+.+.|.+.++.+++.+.++.|+.|++|.. ..+++ +.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFM-KTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHH-HTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHH-HHhCC
Confidence 5799999999999999999999999999999766899999999732 14577 7899
Q ss_pred -CCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 427 -LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 -I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+.++|+++++..++.....+.| ..+.++|.++|+++
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 138 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITG-EVNEKSLTDAVKLA 138 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCS-CCCHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 9999999999654443556666 78999999999886
No 124
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.45 E-value=6.1e-14 Score=126.68 Aligned_cols=99 Identities=14% Similarity=0.111 Sum_probs=74.8
Q ss_pred eeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCC---CCCC
Q 012424 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQ---LGSF 430 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~---I~~~ 430 (464)
.+.++++.++.+.. ..+++++|+|||+|||+|+.+.|.++++++.++ ++.|..||.|.+ ++++ ++|. +.++
T Consensus 38 ~~~~~~~~~~~l~~--~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~-~~~~-~~~~~~~v~~i 111 (167)
T 1z6n_A 38 SNGLPSALTERLQR--IERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRA-EDDL-RQRLALERIAI 111 (167)
T ss_dssp HHCCCHHHHHHHHT--CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHH-HHHT-TTTTTCSSCCS
T ss_pred ccCCCHHHHHHHHH--hCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCC-HHHH-HHHHHcCCCCc
Confidence 34456666655432 246899999999999999999999999999875 599999999988 8888 8887 9999
Q ss_pred CEEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 012424 431 PTILFFPKHSSKPIKYPSERRDVDSLMAFVD 461 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~ 461 (464)
||+++|++|+. .+...|+ .. ..+.++++
T Consensus 112 Pt~i~~~~~G~-~~~~~g~-~p-~~~~~~i~ 139 (167)
T 1z6n_A 112 PLVLVLDEEFN-LLGRFVE-RP-QAVLDGGP 139 (167)
T ss_dssp SEEEEECTTCC-EEEEEES-SC-HHHHHHCH
T ss_pred CeEEEECCCCC-EEEEEcC-CC-HHHHHhHH
Confidence 99999988643 3333342 33 33444443
No 125
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.45 E-value=4.9e-14 Score=119.09 Aligned_cols=87 Identities=11% Similarity=0.198 Sum_probs=67.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC----CCeEEEEEEcCCCc-HHHHHHcCCCCCCCEEEEEeCCCCCeee
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQ-KEYAKQKLQLGSFPTILFFPKHSSKPIK 445 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~----~~v~~~~Id~d~~~-~~l~~~~~~I~~~PTi~lf~~g~~~~~~ 445 (464)
+...+||+|||+||++|+.|.+.+.. .+.. ..+.+.+||++.+. .+++ .+|+|.++|||+||++|+. ...
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~---~~~~~a~~~~~~l~~vdv~~~~~~~la-~~~~V~g~PT~i~f~~G~e-v~R 91 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAP---QYPLTDEGRAAPVQRLQMRDPLPPGLE-LARPVTFTPTFVLMAGDVE-SGR 91 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTT---TGGGSHHHHHSCEEEEETTSCCCTTCB-CSSCCCSSSEEEEEETTEE-EEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHh---hHHHhhhcccceEEEEECCCCCchhHH-HHCCCCCCCEEEEEECCEE-Eee
Confidence 45789999999999999999875443 2322 12788999998862 4788 8999999999999998884 334
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 012424 446 YPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 446 y~gg~~~~e~L~~fI~~l 463 (464)
..| ....+.|.++|+.+
T Consensus 92 i~G-~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 92 LEG-YPGEDFFWPMLARL 108 (116)
T ss_dssp EEC-CCCHHHHHHHHHHH
T ss_pred ecC-CCCHHHHHHHHHHH
Confidence 444 89999999999865
No 126
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.45 E-value=3.6e-13 Score=128.95 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=78.7
Q ss_pred CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhc--C-CCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012424 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA--G-NGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 434 (464)
Q Consensus 358 ~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~--~-~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~ 434 (464)
+++.++.+.. ..++.+|++||||||++|+.+.|.|++++..+. + .+|.+..||++.+ ++++ ++|+|.++||++
T Consensus 126 ~~~~~~~~~~--~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~V~~vPt~~ 201 (243)
T 2hls_A 126 EDATKEALKS--LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN-PDIA-DKYGVMSVPSIA 201 (243)
T ss_dssp CHHHHHHHHH--CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC-HHHH-HHTTCCSSSEEE
T ss_pred CHHHHHHHHH--cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC-HHHH-HHcCCeeeCeEE
Confidence 3345555433 245678999999999999999999999999983 1 3699999999999 9999 899999999998
Q ss_pred EEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 435 FFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 435 lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+ +|+ . .|.| .++.++|.++|++.
T Consensus 202 i--~G~--~-~~~G-~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 202 I--NGY--L-VFVG-VPYEEDFLDYVKSA 224 (243)
T ss_dssp E--TTE--E-EEES-CCCHHHHHHHHHHH
T ss_pred E--CCE--E-EEeC-CCCHHHHHHHHHHH
Confidence 8 665 3 3777 68999999999864
No 127
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.44 E-value=3.5e-14 Score=118.43 Aligned_cols=74 Identities=16% Similarity=0.302 Sum_probs=61.7
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------CCcHHHHHHcCCCCCCCEEEEEeCCCCCeee
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIK 445 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d------~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~ 445 (464)
+++++|+|||+||++|+.+.|.|+++++.++ .||++ .+ ++++ ++|+|.++||+++ +|+ .
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~~~~-~~l~-~~~~V~~~PT~~i--~G~--~-- 76 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTWII--NGR--T-- 76 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTTSCC-CHHH-HHTTCCSSSEEEE--TTE--E--
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEecccccchh-HHHH-HHcCCeEeCEEEE--CCE--E--
Confidence 5778999999999999999999999986663 55665 45 8999 9999999999777 665 2
Q ss_pred cCCCCCCHHHHHHHHH
Q 012424 446 YPSERRDVDSLMAFVD 461 (464)
Q Consensus 446 y~gg~~~~e~L~~fI~ 461 (464)
|.| .++.++|.+|+.
T Consensus 77 ~~G-~~~~~~l~~~~~ 91 (106)
T 3kp8_A 77 YTG-VRSLEALAVASG 91 (106)
T ss_dssp EES-CCCHHHHHHHHT
T ss_pred ecC-CCCHHHHHHHhC
Confidence 666 799999999974
No 128
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.43 E-value=5.1e-13 Score=114.00 Aligned_cols=87 Identities=20% Similarity=0.243 Sum_probs=74.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 428 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~~~~~I~ 428 (464)
.++++||+||++||++|+.+.|.+.++.++++ ++.|+.|+++.+ +.+++ +.|+|.
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~i~ 100 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVW-ANFGVT 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHH-HHTTCC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHH-HHcCCC
Confidence 57899999999999999999999999999997 599999998541 26788 899999
Q ss_pred CCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|++++|+ +|+ .+.+.| ..+.++|.++|+++
T Consensus 101 ~~P~~~~id~~g~--i~~~~g-~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 101 QQPAYAFVDPHGN--VDVVRG-RMSQDELTRRVTAL 133 (136)
T ss_dssp SSSEEEEECTTCC--EEEEES-CCCHHHHHHHHHHH
T ss_pred CCceEEEECCCCC--EEEEec-CCCHHHHHHHHHHH
Confidence 999999996 555 336666 68999999999875
No 129
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.43 E-value=4.5e-13 Score=117.47 Aligned_cols=91 Identities=8% Similarity=0.249 Sum_probs=76.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------cHHHHHHcCCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLGS 429 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------~~~l~~~~~~I~~ 429 (464)
.++++||+||++||++|+.+.|.+.++.+.+++.++.|+.|+++.. +..++ +.|+|.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVL-DAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHH-HHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHH-HhcCCCC
Confidence 5789999999999999999999999999999865699999999764 14788 8999999
Q ss_pred CCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 430 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+||++++..++.....+.| ..+.++|.++|+++
T Consensus 104 ~P~~~lid~~G~i~~~~~G-~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTG-TMTESMIHDYMNLI 136 (151)
T ss_dssp SCEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCcEEEEEeC-CCCHHHHHHHHHHH
Confidence 9999999544333444555 68999999999876
No 130
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.42 E-value=3.5e-13 Score=126.56 Aligned_cols=99 Identities=15% Similarity=0.228 Sum_probs=80.2
Q ss_pred chHHHHHhhcCCCCcEEEEEecC-CChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC--CcHHHHHHcCCCCCCCEEEEE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAP-WCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQKEYAKQKLQLGSFPTILFF 436 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~-wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~--~~~~l~~~~~~I~~~PTi~lf 436 (464)
+.+++++.....+..+||+||++ ||++|+.+.|.|+++++. .+ ++.|++||++. + ++++ ++|+|.++||+++|
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~~ 85 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFDTPEG-KELA-KRYRIDRAPATTIT 85 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETTSHHH-HHHH-HHTTCCSSSEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCCCccc-HHHH-HHcCCCcCceEEEE
Confidence 45556551123456778999999 999999999999999865 33 69999999998 7 9999 99999999999999
Q ss_pred eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 437 PKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 437 ~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|+.....|.| ..+.+++.+|+..+
T Consensus 86 ~~g~~~~~~~~G-~~~~~~l~~~l~~~ 111 (226)
T 1a8l_A 86 QDGKDFGVRYFG-LPAGHEFAAFLEDI 111 (226)
T ss_dssp ETTBCCSEEEES-CCCTTHHHHHHHHH
T ss_pred cCCceeeEEEec-cCcHHHHHHHHHHH
Confidence 988754467777 57778888888753
No 131
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.42 E-value=4.5e-13 Score=103.81 Aligned_cols=74 Identities=15% Similarity=0.252 Sum_probs=64.1
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCC-CH
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERR-DV 453 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~-~~ 453 (464)
..|.||++||++|+.+.|.++++++.+++ ++.++.|| + .+++ ++|+|.++||+++ +|+ .+.. | .. +.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~---~-~~~~-~~~~v~~~Pt~~~--~G~--~~~~-G-~~~~~ 69 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIK---E-MDQI-LEAGLTALPGLAV--DGE--LKIM-G-RVASK 69 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC---S-HHHH-HHHTCSSSSCEEE--TTE--EEEC-S-SCCCH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEec---C-HHHH-HHCCCCcCCEEEE--CCE--EEEc-C-CCCCH
Confidence 46899999999999999999999999986 69999998 5 8999 8999999999998 776 4444 5 66 89
Q ss_pred HHHHHHH
Q 012424 454 DSLMAFV 460 (464)
Q Consensus 454 e~L~~fI 460 (464)
++|.++|
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998875
No 132
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.42 E-value=6.5e-14 Score=124.34 Aligned_cols=66 Identities=15% Similarity=0.219 Sum_probs=51.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHH---HHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEe-CCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELA---DKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP-KHS 440 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la---~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~-~g~ 440 (464)
.+++|||+|||+||++|+.|.|.+.+.. +..+ ..|+.||+|.+..+++ .+|+|.++||++||+ +|+
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---~~fv~V~vD~e~~~~~-~~~~v~~~PT~~f~~~~G~ 112 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---NKFIMLNLMHETTDKN-LSPDGQYVPRIMFVDPSLT 112 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---HTCEEEEESSCCSCGG-GCTTCCCSSEEEEECTTSC
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---cCeEEEEecCCchhhH-hhcCCCCCCEEEEECCCCC
Confidence 6899999999999999999999998643 2222 2355566553325667 799999999999998 776
No 133
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.42 E-value=2.8e-13 Score=120.22 Aligned_cols=104 Identities=13% Similarity=0.247 Sum_probs=81.5
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------ 414 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d------------------ 414 (464)
.+..++++.+.... ..++++||+||++||++|+.+.|.|.+++++|+..++.|+.|+++
T Consensus 22 ~l~~~~g~~~~~~~---~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 22 TMKTADNRPASVYL---KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGL 98 (164)
T ss_dssp TCEETTSSBGGGGC---CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTS
T ss_pred ccCCCCCCEeeHHH---hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhC
Confidence 56666766665432 267899999999999999999999999999986556777766643
Q ss_pred ----------CCcHHHHHHcCCCCCCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 415 ----------GDQKEYAKQKLQLGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 415 ----------~~~~~l~~~~~~I~~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.+ .+++ +.|+|.++||+++|. +|+ ....+.| ..+.++|.++|+++
T Consensus 99 ~~~~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 99 NYPKLPVVTDNG-GTIA-QNLNISVYPSWALIGKDGD-VQRIVKG-SINEAQALALIRNP 154 (164)
T ss_dssp CCTTSCEEECTT-CHHH-HHTTCCSSSEEEEECTTSC-EEEEEES-CCCHHHHHHHHHCT
T ss_pred CCCcceEEEcCc-hHHH-HHcCCCccceEEEECCCCc-EEEEEcC-CCCHHHHHHHHHHH
Confidence 33 6788 899999999999994 555 2444555 68999999999875
No 134
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.41 E-value=7e-13 Score=114.59 Aligned_cols=87 Identities=13% Similarity=0.274 Sum_probs=74.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------------------------CcHHHHHHcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------------------------DQKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------------------------~~~~l~~~~~ 425 (464)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++. + ..++ +.|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~ 110 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSK-GELM-KEY 110 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSS-SHHH-HHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCc-hhHH-Hhc
Confidence 578999999999999999999999999999985579999999964 4 6889 899
Q ss_pred CCCCCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHH
Q 012424 426 QLGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVD 461 (464)
Q Consensus 426 ~I~~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~ 461 (464)
+|.++|+++++. +|+ ....+.| ..+.++|.++|+
T Consensus 111 ~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~ 145 (145)
T 3erw_A 111 HIITIPTSFLLNEKGE-IEKTKIG-PMTAEQLKEWTE 145 (145)
T ss_dssp TCCEESEEEEECTTCC-EEEEEES-CCCHHHHHHHHC
T ss_pred CcCccCeEEEEcCCCc-EEEEEcC-CcCHHHHHHhhC
Confidence 999999999994 555 3445555 689999998874
No 135
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.41 E-value=1.4e-12 Score=115.10 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=74.7
Q ss_pred CCCcEEEEEecCCChhHHh-hHHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCcHH--
Q 012424 371 RQEPWLVVLYAPWCQFCQA-MEGSYVELADKLAGNGVKVGKFRAD----------------------------GDQKE-- 419 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v~~~~Id~d----------------------------~~~~~-- 419 (464)
.++++||+||++||++|+. +.|.+.++.++|++.++.|+.|+++ .. ..
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMP-REGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCc-cccc
Confidence 5799999999999999999 6999999999998767999999863 22 33
Q ss_pred ----HHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 420 ----YAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 420 ----l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++ +.|+|.++|+++++...++....+.| ..+.++|.++|+++
T Consensus 108 ~~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 153 (160)
T 3lor_A 108 RIPSTM-KKYRLEGTPSIILADRKGRIRQVQFG-QVDDFVLGLLLGSL 153 (160)
T ss_dssp SSCHHH-HHTTCCSSSEEEEECTTSBEEEEEES-CCCHHHHHHHHHHH
T ss_pred hhhhHH-HhcccCccceEEEECCCCcEEEEecC-cCCHHHHHHHHHHH
Confidence 88 89999999999999644433445555 68999999999875
No 136
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.40 E-value=2.7e-13 Score=122.95 Aligned_cols=79 Identities=13% Similarity=0.281 Sum_probs=66.8
Q ss_pred ecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHH-H--HHHHHHhcCCCeEEEEEEcCCCcHHHHHHcC-------
Q 012424 356 TLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGS-Y--VELADKLAGNGVKVGKFRADGDQKEYAKQKL------- 425 (464)
Q Consensus 356 ~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~-~--~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~------- 425 (464)
..+++.|+.... .+++|||+|||+||++|+.|.|. | .++++.+++ ++.+++||.++. +++. +.|
T Consensus 26 ~~~~ea~~~A~~---~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~-~~l~-~~y~~~~q~~ 99 (173)
T 3ira_A 26 PWGEEAFEKARK---ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREER-PDID-NIYMTVCQII 99 (173)
T ss_dssp CSSHHHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTC-HHHH-HHHHHHHHHH
T ss_pred CcCHHHHHHHHH---hCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCccc-CcHH-HHHHHHHHHH
Confidence 345677877665 78999999999999999999993 3 577777765 699999999998 8998 788
Q ss_pred -CCCCCCEEEEEe-CCC
Q 012424 426 -QLGSFPTILFFP-KHS 440 (464)
Q Consensus 426 -~I~~~PTi~lf~-~g~ 440 (464)
+|.++||++||. +|+
T Consensus 100 ~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 100 LGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HSCCCSSEEEEECTTSC
T ss_pred cCCCCCcceeeECCCCC
Confidence 899999999996 665
No 137
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.40 E-value=1.5e-12 Score=115.38 Aligned_cols=91 Identities=15% Similarity=0.333 Sum_probs=75.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------------------CcHHHHHHcCCCCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------------------DQKEYAKQKLQLGSFP 431 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------------------~~~~l~~~~~~I~~~P 431 (464)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++. + .+++ +.|+|.++|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDAT-GQVQ-QRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTT-SHHH-HHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECch-HHHH-HHhCCCCcc
Confidence 578999999999999999999999999999986689999999987 4 6899 999999999
Q ss_pred EEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHh
Q 012424 432 TILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 463 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~gg-~~~~e~L~~fI~~l 463 (464)
+++++..+++....+.|. ..+.+++++.+++.
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhh
Confidence 998885544434455552 45778888887764
No 138
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.40 E-value=8.4e-13 Score=115.60 Aligned_cols=89 Identities=17% Similarity=0.337 Sum_probs=76.2
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcH-----------------------HHHHHcCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK-----------------------EYAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~-----------------------~l~~~~~~I 427 (464)
.++++||+||++||++|+.+.|.+.++.+++.+.++.|+.|+++.+ . +++ +.|+|
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v 106 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKN-KKAWENMVTKDQLKGIQLHMGTDRTFM-DAYLI 106 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSC-HHHHHHHHHHHTCCSEEEECSSCTHHH-HHTTC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCc-HHHHHHHHHhcCCCCceeecCcchhHH-HHcCc
Confidence 4789999999999999999999999999999876799999999887 3 688 89999
Q ss_pred CCCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 428 GSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++|++++++ +|+ .+....|..+.++|.++|+++
T Consensus 107 ~~~P~~~lid~~G~--i~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 107 NGIPRFILLDRDGK--IISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp CSSCCEEEECTTSC--EEESSCCCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCe--EEEccCCCCCHHHHHHHHHHH
Confidence 9999999997 555 333333468889999999875
No 139
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.40 E-value=8.7e-13 Score=124.27 Aligned_cols=99 Identities=19% Similarity=0.310 Sum_probs=79.4
Q ss_pred chHHHHHhhcCCCCcEEEEEe-----cCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012424 360 TGMENLARLDHRQEPWLVVLY-----APWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPTI 433 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fy-----a~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi 433 (464)
+.+++++. .+..++++|.|| +|||++|+.+.|.|.++++.+.+ ++|.|++|||+.+ +++| ++|+|+++||+
T Consensus 9 ~~l~~~~~-~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~Ptl 85 (229)
T 2ywm_A 9 MQLKELAQ-KEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH-KEET-EKYGVDRVPTI 85 (229)
T ss_dssp HHHHHHHH-HHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC-HHHH-HHTTCCBSSEE
T ss_pred HHHHHHHH-HhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc-HHHH-HHcCCCcCcEE
Confidence 34455441 124567777776 89999999999999999988832 3799999999999 9999 99999999999
Q ss_pred EEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 434 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 434 ~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|++|+ ....|.| .++.++|..|+..+
T Consensus 86 ~~~~~~~-~~~~~~G-~~~~~~l~~~~~~~ 113 (229)
T 2ywm_A 86 VIEGDKD-YGIRYIG-LPAGLEFTTLINGI 113 (229)
T ss_dssp EEESSSC-CCEEEES-CCCTTHHHHHHHHH
T ss_pred EEECCCc-ccceecC-CccHHHHHHHHHHH
Confidence 9997554 3678887 68888999998753
No 140
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.39 E-value=6.7e-13 Score=115.27 Aligned_cols=89 Identities=12% Similarity=0.206 Sum_probs=73.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-------------------------HHHHcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-------------------------YAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~-------------------------l~~~~~ 425 (464)
.++++||+||++||++|+.+.|.+.++.+.+++.++.|+.|+++.+ .+ ++ +.|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK-DEEWLKFIRSKKIGGWLNVRDSKNHTDFK-ITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS-SHHHHHHHHHHTCTTSEEEECTTCCCCHH-HHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC-HHHHHHHHHHcCCCCceEEeccccchhHH-Hhc
Confidence 5789999999999999999999999999999875699999999977 55 88 899
Q ss_pred CCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 426 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 426 ~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
+|.++|+++++..++.....+.| ..+.+++.+.+.+
T Consensus 108 ~i~~~P~~~lid~~G~i~~~~~g-~~~~~~~l~~l~~ 143 (148)
T 3hcz_A 108 DIYATPVLYVLDKNKVIIAKRIG-YENLDDFLVQYEK 143 (148)
T ss_dssp CCCSSCEEEEECTTCBEEEESCC-GGGHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCcEEEecCC-HHHHHHHHHHHHH
Confidence 99999999999544433445555 5666666666654
No 141
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.38 E-value=1e-12 Score=114.20 Aligned_cols=86 Identities=16% Similarity=0.286 Sum_probs=71.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHH---HHHHhcCCCeEEEEEEcCCCcHH------------------------HHHH
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVE---LADKLAGNGVKVGKFRADGDQKE------------------------YAKQ 423 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~---la~~~~~~~v~~~~Id~d~~~~~------------------------l~~~ 423 (464)
.++++||+||++||++|+.+.|.+.+ +.+++++.++.|+.|+.+.+ .+ +. +
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 107 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEE-LDEWKKHRNDFAKEWTNGYDKELVIKNK-N 107 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSC-HHHHHHHGGGSCTTSEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCC-HHHHHHHHHhcccccccccCccchhhhh-h
Confidence 46999999999999999999999999 99999776899999999877 33 36 7
Q ss_pred cCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 424 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 424 ~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
.|+|.++||++++++.+. +.+.+ .+.++|.+||++
T Consensus 108 ~~~v~~~P~~~lid~~G~--i~~~~--~~~~~l~~~l~e 142 (142)
T 3eur_A 108 LYDLRAIPTLYLLDKNKT--VLLKD--ATLQKVEQYLAE 142 (142)
T ss_dssp CSCCTTCSEEEEECTTCB--EEEEE--ECHHHHHHHHHC
T ss_pred hcCCCcCCeEEEECCCCc--EEecC--CCHHHHHHHHhC
Confidence 899999999999966553 33332 468899999874
No 142
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.38 E-value=1.8e-12 Score=112.53 Aligned_cols=88 Identities=16% Similarity=0.262 Sum_probs=73.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHh-cCCCeEEEEEEcCCC------------------------cHHHHHHcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL-AGNGVKVGKFRADGD------------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~-~~~~v~~~~Id~d~~------------------------~~~l~~~~~ 425 (464)
.++++||+||++||++|+.+.|.+.++.+++ .+.++.|+.|+++.. +..++ +.|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETA-KQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-HHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHH-Hhc
Confidence 5789999999999999999999999999999 665799999999874 13788 899
Q ss_pred CCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|.++|+++++..++. .+.. . .+.++|.++|+++
T Consensus 111 ~v~~~P~~~lid~~G~-i~~~-~--~~~~~l~~~l~~l 144 (148)
T 3fkf_A 111 AILTLPTNILLSPTGK-ILAR-D--IQGEALTGKLKEL 144 (148)
T ss_dssp TCCSSSEEEEECTTSB-EEEE-S--CCHHHHHHHHHHH
T ss_pred CCCCcCEEEEECCCCe-EEEe-c--CCHHHHHHHHHHH
Confidence 9999999999954442 3332 2 2888999998875
No 143
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.38 E-value=2.1e-12 Score=113.89 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=74.5
Q ss_pred CCCcEEEEEecCCChhHHhh-HHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCcH---
Q 012424 371 RQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRAD----------------------------GDQK--- 418 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~Id~d----------------------------~~~~--- 418 (464)
.++++||+||++||++|+.+ .|.+.++.++|++.++.|+.|+++ .. .
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQP-GDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCc-cchh
Confidence 57999999999999999996 999999999998667999999964 12 2
Q ss_pred --HHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 419 --EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 419 --~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++ +.|+|.++|+++++..++.....+.| ..+.++|.++|+++
T Consensus 106 ~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 106 MPRTM-AAYQMRGTPSLLLIDKAGDLRAHHFG-DVSELLLGAEIATL 150 (158)
T ss_dssp SCHHH-HHTTCCSSSEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred hHHHH-HHcCCCCCCEEEEECCCCCEEEEEeC-CCCHHHHHHHHHHH
Confidence 588 89999999999999644433445555 68999999999875
No 144
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.38 E-value=1.3e-12 Score=113.11 Aligned_cols=87 Identities=16% Similarity=0.381 Sum_probs=71.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHH---HHHHhcCCCeEEEEEEcCCCcHHH------------------------HHH
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVE---LADKLAGNGVKVGKFRADGDQKEY------------------------AKQ 423 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~---la~~~~~~~v~~~~Id~d~~~~~l------------------------~~~ 423 (464)
.++++||+||++||++|+.+.|.+.+ +.+.+++.++.|+.|+++.+ .+. + +
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 103 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDEN-REEWATKAVYMPQGWIVGWNKAGDIRTR-Q 103 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSC-HHHHHHHHTTSCTTCEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCC-HHHHHHHHHHcCCCcceeeCCccchhhH-H
Confidence 57999999999999999999999998 89988766799999999876 433 2 3
Q ss_pred cCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 424 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 424 ~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.|+|.++|+++++...+. +.+ + ..+.++|.++|+++
T Consensus 104 ~~~v~~~P~~~lid~~G~--i~~-~-~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKR--VIL-K-DTSMEQLIDYLATQ 139 (142)
T ss_dssp CSCCCSSSEEEEECTTCB--EEE-C-SCCHHHHHHHHHC-
T ss_pred HcCCCCCCeEEEECCCCC--EEe-c-CCCHHHHHHHHHHH
Confidence 899999999999964442 333 2 47899999999875
No 145
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.37 E-value=1.9e-12 Score=113.41 Aligned_cols=89 Identities=19% Similarity=0.270 Sum_probs=74.9
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc-----------------------CCCcHHHHHHcCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA-----------------------DGDQKEYAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~-----------------------d~~~~~l~~~~~~I 427 (464)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+. +.+ ..++ +.|+|
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i 104 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDAD-KAVG-QAFGT 104 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSS-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCch-HHHH-HHcCC
Confidence 5789999999999999999999999999999876688887774 334 6788 89999
Q ss_pred CCCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 428 GSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++|+++++. +|+ ....+.| ..+.++|.++|+++
T Consensus 105 ~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 105 QVYPTSVLIGKKGE-ILKTYVG-EPDFGKLYQEIDTA 139 (153)
T ss_dssp CSSSEEEEECSSSC-CCEEEES-SCCHHHHHHHHHHH
T ss_pred CccCeEEEECCCCc-EEEEEcC-CCCHHHHHHHHHHH
Confidence 9999999995 554 3455666 68999999999875
No 146
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.36 E-value=2.5e-12 Score=109.52 Aligned_cols=89 Identities=18% Similarity=0.300 Sum_probs=74.1
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc----------------------------CCCcHHHHH
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA----------------------------DGDQKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~----------------------------d~~~~~l~~ 422 (464)
.++++||+||++||++|+.+.|.+.++.+++++ ++.++.|++ +.+ .+++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~- 97 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPS-GKLL- 97 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTT-CHHH-
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcc-hHHH-
Confidence 578999999999999999999999999999765 799999954 223 5788
Q ss_pred HcCCCCCCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHhC
Q 012424 423 QKLQLGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDALR 464 (464)
Q Consensus 423 ~~~~I~~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l~ 464 (464)
+.|+|.++|+++++. +|+ ....+.| ..+.++|.++|+++.
T Consensus 98 ~~~~v~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l~ 138 (138)
T 4evm_A 98 ETYGVRSYPTQAFIDKEGK-LVKTHPG-FMEKDAILQTLKELA 138 (138)
T ss_dssp HHTTCCSSSEEEEECTTCC-EEEEEES-CCCHHHHHHHHHHCC
T ss_pred HHcCcccCCeEEEECCCCc-EEEeecC-CCcHHHHHHHHHhhC
Confidence 899999999999995 555 3445555 789999999999863
No 147
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.36 E-value=4.1e-12 Score=111.13 Aligned_cols=92 Identities=14% Similarity=0.212 Sum_probs=75.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcH----------------------HHHHHcCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK----------------------EYAKQKLQLG 428 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~----------------------~l~~~~~~I~ 428 (464)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++.+ . +++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 104 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK-TGDAMKFLAQVPAEFTVAFDPKGQTP-RLYGVK 104 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS-HHHHHHHHHHSCCCSEEEECTTCHHH-HHTTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC-HHHHHHHHHHcCCCCceeECCcchhH-HHcCCC
Confidence 5789999999999999999999999999999876699999999876 4 677 889999
Q ss_pred CCCEEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHhC
Q 012424 429 SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDALR 464 (464)
Q Consensus 429 ~~PTi~lf~~g~~~~~~y~gg-~~~~e~L~~fI~~l~ 464 (464)
++|+++++..+++....+.|. ..+.++|.++|++++
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 105 GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 999999995444333444442 346789999998763
No 148
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.35 E-value=2.2e-12 Score=113.37 Aligned_cols=87 Identities=16% Similarity=0.249 Sum_probs=70.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHcCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKLQ 426 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~------------------------~~~l~~~~~~ 426 (464)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++.. +.+++ +.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVL-ESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHH-HHhC
Confidence 5789999999999999999999999999999876799999999973 26788 8999
Q ss_pred CCCCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 427 LGSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 I~~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|.++||++++. +|+ ....+. +.++|.++|+++
T Consensus 107 v~~~P~~~lid~~G~-i~~~~~----~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 IVGFPHIILVDPEGK-IVAKEL----RGDDLYNTVEKF 139 (152)
T ss_dssp CCSSCEEEEECTTSE-EEEECC----CTTHHHHHHHHH
T ss_pred CCcCCeEEEECCCCe-EEEeeC----CHHHHHHHHHHH
Confidence 99999999995 554 222222 345677777664
No 149
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.34 E-value=2.5e-12 Score=135.67 Aligned_cols=177 Identities=12% Similarity=0.102 Sum_probs=114.5
Q ss_pred HHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHH
Q 012424 103 IMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQAL 180 (464)
Q Consensus 103 il~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~ 180 (464)
.++++.+..+ .+++|++|||+||+++ +|+.+.+.++.++|+|+|...++..+.+++++++||++++++..... +..
T Consensus 199 ~i~~ir~~~~~~kvvvalSGGvDSsvla~ll~~~g~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~~~~-f~~- 276 (503)
T 2ywb_A 199 LLREVRERAGKDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKER-FLK- 276 (503)
T ss_dssp HHHHHHHHHTTSEEEEEECSSHHHHHHHHHHHHHTCEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEECHHH-HHH-
T ss_pred HHHhhhhhccCccEEEEecCCcchHHHHHHHHHcCCeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEECcHH-HHH-
Confidence 3334434444 5799999999999766 88888888899999999988888999999999999999988865432 111
Q ss_pred HHhcCCCCCCCcchhhhhhccccchHHHHhc---cCcEEEEeeecc-CCcccccC--CceeecCCCCcCccCCCCCeEEE
Q 012424 181 VRSKGLFSFYEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKD-QSPGTRSE--IPVVQVDPVFEGLEGGVGSLVKW 254 (464)
Q Consensus 181 ~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~---~~~~~itG~R~~-ES~~~R~~--~~~~~~d~~~~~~~~~~~~~~k~ 254 (464)
...|.. .++.....|+ ..+...+.+..+ +.+.+++|...+ +.. +|.. ...+.......+.. ...+...+
T Consensus 277 -~l~g~~-~pe~~r~~~~-~~~~~~l~~~A~~~~g~~~la~G~~~~D~~E-t~~~g~~~~iks~~~l~~l~-~~~~~~ii 351 (503)
T 2ywb_A 277 -ALKGVE-DPEEKRKIIG-REFVAAFSQVARERGPFRFLAQGTLYPDVIE-SAGGHGAAKIKSHHNVGGLP-EDLEFELL 351 (503)
T ss_dssp -HHTTCC-CHHHHHHHHH-HHHHHHHHHHHHHHCCCSEEECCCCHHHHHC------------------CCC-SSCCCEEE
T ss_pred -hhcCCC-ChHHHhhhhh-HHHHHHHHHHHHhcCCCCEEEECCcCccchh-hccCCccccccccccccccc-ccccCceE
Confidence 122321 1111122333 345567766554 667999999543 332 3320 00000000000000 01235789
Q ss_pred EeCccCcHHHHHHHHHhcCCCcchhhhcCCcc
Q 012424 255 NPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 286 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~s 286 (464)
+||.+|+.+||++|.+++|+|++.++++.|..
T Consensus 352 ~PL~~l~K~EVr~~a~~~glp~~i~~~~P~~~ 383 (503)
T 2ywb_A 352 EPFRLLFKDEVRELALLLGLPDTLRLRHPFPG 383 (503)
T ss_dssp CTTTTCCHHHHHHHHHHTTCCHHHHSCCCCCT
T ss_pred ehhhcCCHHHHHHHHHHcCCChhheecCCCCC
Confidence 99999999999999999999999999988764
No 150
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.33 E-value=2.2e-12 Score=107.52 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=68.8
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCC
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 452 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~ 452 (464)
...|++||++||++|+.+.+.++++++++ ++.|.+||++.+ ++++ .+|++. +|++++|.+|+ .+ ..| ..+
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~d-~~l~-~~ygv~-VP~l~~~~dG~--~v-~~g-~~~ 98 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINIDGN-EHLT-RLYNDR-VPVLFAVNEDK--EL-CHY-FLD 98 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTTC-HHHH-HHSTTS-CSEEEETTTTE--EE-ECS-SCC
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECCCC-HHHH-HHhCCC-CceEEEEECCE--EE-Eec-CCC
Confidence 36799999999999999999999999887 489999999999 9999 899997 99999999887 44 334 588
Q ss_pred HHHHHHHH
Q 012424 453 VDSLMAFV 460 (464)
Q Consensus 453 ~e~L~~fI 460 (464)
.++|.+||
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 89999987
No 151
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.32 E-value=5.9e-12 Score=114.27 Aligned_cols=90 Identities=13% Similarity=0.299 Sum_probs=72.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCe------EEEEEEcCC-CcHHHHHHcC------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGV------KVGKFRADG-DQKEYAKQKL------------------ 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v------~~~~Id~d~-~~~~l~~~~~------------------ 425 (464)
.++++||+||++||++|+.+.|.|.++.++|++.++ .|+.|+++. + .+.. ++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~-~~~~-~~~~~~~~~~~~~~~d~~~~~ 135 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYS-RDIA-QDFVTDNGLDYPSIYDPPFMT 135 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCC-HHHH-HHHHHHTTCCSCEEECTTCGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCC-HHHH-HHHHHHcCCCccEEECCcchH
Confidence 578999999999999999999999999999987557 999999998 5 5555 444
Q ss_pred -------CCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 -------QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 -------~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|.++|+++++...++....+.| ..+.++|.++|+++
T Consensus 136 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 136 AASLGGVPASVIPTTIVLDKQHRPAAVFLR-EVTSKDVLDVALPL 179 (183)
T ss_dssp GGGTTTCCTTCCSEEEEECTTSCEEEEECS-CCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 68999988887544433445665 68999999999875
No 152
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.32 E-value=5.2e-12 Score=110.73 Aligned_cols=93 Identities=18% Similarity=0.295 Sum_probs=74.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----------------------HHHHHHcCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----------------------KEYAKQKLQLG 428 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~----------------------~~l~~~~~~I~ 428 (464)
.++++||+||++||++|+.+.|.+.++.+++.+.++.|+.|+++.+. ..++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVG-KLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHH-HHhCCC
Confidence 57899999999999999999999999999998767999999998751 2377 889999
Q ss_pred CCCEEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHhC
Q 012424 429 SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDALR 464 (464)
Q Consensus 429 ~~PTi~lf~~g~~~~~~y~gg-~~~~e~L~~fI~~l~ 464 (464)
++|+++++..+++....+.|. ..+.++|.++|++++
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 106 GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-
T ss_pred CCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHH
Confidence 999888885444334445552 247789999998763
No 153
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.32 E-value=5.4e-12 Score=110.76 Aligned_cols=85 Identities=19% Similarity=0.350 Sum_probs=72.3
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc---------------------------CCCcHHHHHHcC
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA---------------------------DGDQKEYAKQKL 425 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~---------------------------d~~~~~l~~~~~ 425 (464)
+++||+||++||++|+.+.|.+.++.+++ ++.|+.|++ +.+ ..++ +.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~-~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP-HEVA-ARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH-HHHH-TTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch-HHHH-HHh
Confidence 89999999999999999999999999999 489999998 234 7788 899
Q ss_pred CCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|.++|+++++...++....+.| ..+.++|.++|+++
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 106 KVLGQPWTFVVDREGKVVALFAG-RAGREALLDALLLA 142 (154)
T ss_dssp SBCSSCEEEEECTTSEEEEEEES-BCCHHHHHHHHHHT
T ss_pred CCCcccEEEEECCCCCEEEEEcC-CCCHHHHHHHHHhc
Confidence 99999999999544433445555 68999999999876
No 154
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.31 E-value=1.4e-11 Score=108.75 Aligned_cols=86 Identities=16% Similarity=0.266 Sum_probs=70.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-----------------------HHHHcCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-----------------------YAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~-----------------------l~~~~~~I 427 (464)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|+++.. .+ ++ +.|+|
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD-EHFWKTSADNLPWVCVRDANGAYSSYI-SLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC-HHHHHHHHTTCSSEEEECSSGGGCHHH-HHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC-HHHHHHHHhCCCceEEECCCCcchHHH-HHcCc
Confidence 4689999999999999999999999999999876799999999987 43 77 89999
Q ss_pred CCCCEEEEEeCCCCCeeecCCCCCCHHHHHHH
Q 012424 428 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 459 (464)
Q Consensus 428 ~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~f 459 (464)
.++|+++++...+.....+.| ..+.++...-
T Consensus 112 ~~~P~~~lid~~G~i~~~~~g-~~~~e~~~~~ 142 (152)
T 2lrt_A 112 TNLPSVFLVNRNNELSARGEN-IKDLDEAIKK 142 (152)
T ss_dssp CSCSEEEEEETTTEEEEETTT-CSCHHHHHHH
T ss_pred ccCceEEEECCCCeEEEecCC-HHHHHHHHHH
Confidence 999999999644433445555 5776665543
No 155
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=99.30 E-value=2e-11 Score=121.39 Aligned_cols=148 Identities=17% Similarity=0.156 Sum_probs=107.9
Q ss_pred CcEEEEechhHHHHHH-HHHHHc----CCC-eEEEEEeCCCC--cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhc
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLT----GRP-FRVFSLDTGRL--NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSK 184 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~----~~~-i~vv~~DTg~~--fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~ 184 (464)
++++|++|||+||+++ +++.+. +.+ +.++|+|+|.. .++..++++++++++|++++++..+... +....
T Consensus 25 ~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~~v~~~~~~~---~~~~~ 101 (317)
T 1wy5_A 25 RRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRA---FAKEN 101 (317)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHH---HHHHT
T ss_pred CEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEEechh---hhccC
Confidence 5699999999999766 787764 567 88999999974 5789999999999999999888765432 22233
Q ss_pred CCCCCCCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCccc------ccCC-ceee-cCCCCcCccCCCCCeEEE
Q 012424 185 GLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGT------RSEI-PVVQ-VDPVFEGLEGGVGSLVKW 254 (464)
Q Consensus 185 g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~------R~~~-~~~~-~d~~~~~~~~~~~~~~k~ 254 (464)
+ .+...||+..+...+.+..+ +.+.+++|...++...+ |..- .-+. ..+. .+ ..+
T Consensus 102 ~------~~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~dD~~Et~l~~l~rg~g~~gl~~~~~~--------~~-~ii 166 (317)
T 1wy5_A 102 R------MSLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDLLETSLLFFTRGTGLDGLIGFLPK--------EE-VIR 166 (317)
T ss_dssp T------CCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHHHHHHHHHHHHHHCCCHHHHHCSCSE--------ET-TEE
T ss_pred C------CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeCchhHHHHHHHHHHHhCCCcccccCCCCC--------CC-eEE
Confidence 3 13567888888888888776 56799999998864311 1110 0000 0000 01 368
Q ss_pred EeCccCcHHHHHHHHHhcCCCcch
Q 012424 255 NPVANVKGNDIWNFLRTMDVPINS 278 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~~lp~np 278 (464)
+||++|+..||+.|.+.+++|+..
T Consensus 167 rPLl~~~k~eI~~~~~~~gl~~~~ 190 (317)
T 1wy5_A 167 RPLYYVKRSEIEEYAKFKGLRWVE 190 (317)
T ss_dssp CTTTTCCHHHHHHHHHHTTCCCCC
T ss_pred CCCccCCHHHHHHHHHHcCCCeeE
Confidence 999999999999999999999863
No 156
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.30 E-value=7.5e-12 Score=108.79 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=61.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHcCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 426 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~-----------------------~~~l~~~~~~ 426 (464)
.++++||+||++||++|+.+.|.+.++++++++ .++.|+.|+++.+ +.+++ +.|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLT-TGFD 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHH-HHcC
Confidence 578999999999999999999999999999984 4799999999864 14688 8999
Q ss_pred CCCCCEEEEEe--CCC
Q 012424 427 LGSFPTILFFP--KHS 440 (464)
Q Consensus 427 I~~~PTi~lf~--~g~ 440 (464)
|.++||++++. +|+
T Consensus 106 v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 106 VKSIPTLVGVEADSGN 121 (144)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCc
Confidence 99999999997 565
No 157
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=99.29 E-value=1.2e-11 Score=122.52 Aligned_cols=164 Identities=18% Similarity=0.243 Sum_probs=99.8
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcHHHHHHHHH-HHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDE-VEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 189 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~-~~~i~vv~~DTg~~fpeT~~~~~~-~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 189 (464)
++++|++|||+||+++ +|+.+. +.++.++|+|+|...++..+.+.+ +++++|++++++..... +.. ...+. ..
T Consensus 21 ~kvlvalSGGvDSsvla~ll~~~~g~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-f~~--~l~~~-~~ 96 (308)
T 2dpl_A 21 SKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVDAQDR-FFS--ALKGV-TD 96 (308)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCCCTTHHHHHHHHHTTTTCCEEEEEECHHH-HHH--HTTTC-CC
T ss_pred CCEEEEEeChHHHHHHHHHHHHhhCCCEEEEEEcCCCCChHHHHHHHHHHHHHcCCcEEEEECCHH-HHH--hhhCC-CC
Confidence 5799999999999766 787775 788999999999866544455555 66789999988765421 111 11222 11
Q ss_pred CCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCCcCccCCCCCeEEEEeCccCcHHHHHH
Q 012424 190 YEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWN 267 (464)
Q Consensus 190 ~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~ 267 (464)
+......||..+ ...+.+..+ |.+.+++|...++-..++..+...... .+.. ...++..++||.+|+.+||++
T Consensus 97 pe~~~~~~~~~~-~~~l~~~A~~~g~~~la~Gh~~dD~~Et~~~iks~~~~---~~l~-~~~~~~virPL~~l~K~EI~~ 171 (308)
T 2dpl_A 97 PEEKRKIIGRVF-IEVFEEVAKKIGAEYLIQGTIAPDWIESQGKIKSHHNV---GGLP-EKLNLKLIEPLRDLYKDEVRE 171 (308)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHTCSEEECCCCCC-------------------------CCCEEECTTTTCCHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHcCcCEEEECCCCccchhhccchhhhhcc---ccCC-ccCCCeEEEEcccCCHHHHHH
Confidence 111123454433 344444433 667999999877542233222211100 0000 012466899999999999999
Q ss_pred HHHhcCCCcchhhhcCCc
Q 012424 268 FLRTMDVPINSLHSQGYI 285 (464)
Q Consensus 268 yi~~~~lp~npLy~~Gy~ 285 (464)
|.+.+|+|++..+.+.|.
T Consensus 172 ~a~~~glp~~i~~~~P~~ 189 (308)
T 2dpl_A 172 LAKFLGLPEKIYNRMPFP 189 (308)
T ss_dssp HHHHTTCCHHHHTCCCCC
T ss_pred HHHHhCCCceeeecCCCC
Confidence 999999999877765543
No 158
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.29 E-value=5.2e-12 Score=112.75 Aligned_cols=85 Identities=19% Similarity=0.336 Sum_probs=67.9
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc-----------------------CCCcHHHHHHcCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA-----------------------DGDQKEYAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~-----------------------d~~~~~l~~~~~~I 427 (464)
.++++||+||++||++|+.+.|.++++.++ ++.|+.|++ +.+ ..++ +.|+|
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 123 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGD-GMLG-LDLGV 123 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcc-hHHH-HHcCc
Confidence 689999999999999999999999999876 478888884 444 6788 89999
Q ss_pred CCCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 428 GSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++|+++++. +|+ ....+.| ..+.++|.++|+++
T Consensus 124 ~~~P~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 124 YGAPETFLIDGNGI-IRYRHAG-DLNPRVWEEEIKPL 158 (168)
T ss_dssp CSSSEEEEECTTSB-EEEEEES-CCCHHHHHHTTHHH
T ss_pred cccCEEEEECCCCe-EEEEEeC-CCCHHHHHHHHHHH
Confidence 9999777775 554 2345555 68899988888764
No 159
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.29 E-value=2.3e-11 Score=106.59 Aligned_cols=88 Identities=14% Similarity=0.237 Sum_probs=72.1
Q ss_pred CCCcEEEEEecCCChh--HHhhHHHHHHHHHHh-cCCCeEEEEEEcCCCc------------------------HHHHHH
Q 012424 371 RQEPWLVVLYAPWCQF--CQAMEGSYVELADKL-AGNGVKVGKFRADGDQ------------------------KEYAKQ 423 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~--C~~~~p~~~~la~~~-~~~~v~~~~Id~d~~~------------------------~~l~~~ 423 (464)
.++++||+||++||++ |+.+.|.+.++.++| ++.++.|+.|++|... .+++ +
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVA-K 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-H
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHH-H
Confidence 5789999999999999 999999999999999 6657999999998761 2788 8
Q ss_pred cCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 424 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 424 ~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.|+|.++|+++++...+. .+.. . .+.++|.+.|+++
T Consensus 111 ~~~v~~~P~~~lid~~G~-i~~~-~--~~~~~l~~~l~~l 146 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGK-ILAK-N--LRGEELKKKIENI 146 (150)
T ss_dssp HTTCCSSSEEEEECTTSB-EEEE-S--CCHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCE-EEEc-c--CCHHHHHHHHHHH
Confidence 999999999999954442 3332 2 3788888888765
No 160
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.28 E-value=7.4e-12 Score=109.89 Aligned_cols=87 Identities=14% Similarity=0.176 Sum_probs=69.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 428 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~~~~~I~ 428 (464)
.++++||+||++||++|+.+.|.+.++.++ + ++.|+.|+++.+ +.+++ +.|+|.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS-IEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH-HHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH-HhcCcC
Confidence 478999999999999999999999998776 3 589999887532 14788 889999
Q ss_pred CCCEEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|+++++. +|+ ....+.| ..+.++|.++|+++
T Consensus 117 ~~P~~~~id~~G~-i~~~~~g-~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 117 GVPETFVVGREGT-IVYKLVG-PITPDNLRSVLLPQ 150 (156)
T ss_dssp SSCEEEEECTTSB-EEEEEES-CCCHHHHHHTHHHH
T ss_pred ccCeEEEEcCCCC-EEEEEeC-CCCHHHHHHHHHHH
Confidence 999877774 554 2344555 68888888888764
No 161
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.27 E-value=1.3e-11 Score=109.84 Aligned_cols=87 Identities=16% Similarity=0.272 Sum_probs=73.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------CCc---------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------GDQ--------------- 417 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d------------------~~~--------------- 417 (464)
.++++||+||++||++|+.+.|.+.++.++++ ++.|+.|+++ .+.
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 57999999999999999999999999999998 5999999998 331
Q ss_pred ------HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCC-CHHHHHHHHHHh
Q 012424 418 ------KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERR-DVDSLMAFVDAL 463 (464)
Q Consensus 418 ------~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~-~~e~L~~fI~~l 463 (464)
.+++ +.|+|.++||++++..++. .+. .| .. +.++|.++|+++
T Consensus 114 ~~~~d~~~~~-~~~~v~~~P~~~lid~~G~-i~~-~g-~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 114 IMVMDDGSLV-EKFNVRSIDYIVIMDKSSN-VLY-AG-TTPSLGELESVIKSV 162 (165)
T ss_dssp EEEECCSHHH-HHTTCCSSSEEEEEETTCC-EEE-EE-ESCCHHHHHHHHHHC
T ss_pred eEEeChHHHH-HHhCCCCceEEEEEcCCCc-EEE-eC-CCCCHHHHHHHHHHH
Confidence 2778 8999999999999954442 333 55 67 899999999886
No 162
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.27 E-value=5.5e-12 Score=101.23 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=62.2
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHH
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDS 455 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~ 455 (464)
|++||++||++|+.+.|.|++++..+ +.+||++++ ++++ ++|++. +||+++ .+|+ .+. | ..+.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~-~~l~-~~~g~~-vPtl~~-~~G~--~v~--g-~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDD-AALE-SAYGLR-VPVLRD-PMGR--ELD--W-PFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTC-HHHH-HHHTTT-CSEEEC-TTCC--EEE--S-CCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCC-HHHH-HHhCCC-cCeEEE-ECCE--EEe--C-CCCHHH
Confidence 78999999999999999999875332 689999999 9999 899998 999998 7777 443 4 689999
Q ss_pred HHHHHHHh
Q 012424 456 LMAFVDAL 463 (464)
Q Consensus 456 L~~fI~~l 463 (464)
|.++|+++
T Consensus 68 L~~~l~~~ 75 (87)
T 1ttz_A 68 LRAWLDAA 75 (87)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99999764
No 163
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.27 E-value=7.5e-12 Score=108.77 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=71.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc-------------------------HHHHHHcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ-------------------------KEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~-------------------------~~l~~~~~ 425 (464)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|++|.+. .+++ +.|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELY-KKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHH-HHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHH-HHc
Confidence 57899999999999999999999999999998767999999988641 2567 789
Q ss_pred CCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+|.++|+++++...++ .+.. . .+.++|.++|+++
T Consensus 110 ~v~~~P~~~lid~~G~-i~~~-~--~~~~~l~~~l~~i 143 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGV-IIAA-N--VTPEKLTEILKAI 143 (143)
T ss_dssp TGGGCCCEEEECTTSB-EEEE-S--CCHHHHHHHHTC-
T ss_pred CCCCCCcEEEECCCCE-EEEc-c--CCHHHHHHHHHhC
Confidence 9999999999974442 3333 2 4678898888754
No 164
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.25 E-value=1.7e-11 Score=106.32 Aligned_cols=74 Identities=18% Similarity=0.289 Sum_probs=62.9
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHcCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 426 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~-----------------------~~~l~~~~~~ 426 (464)
.++++||+||++||++|+.+.|.+.++++++++ .++.|+.|+++.+ +.+++ +.|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELG-KTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHH-HHcC
Confidence 578999999999999999999999999999983 4799999999874 14688 8999
Q ss_pred CCCCCEEEEEe--CCCCCeeecC
Q 012424 427 LGSFPTILFFP--KHSSKPIKYP 447 (464)
Q Consensus 427 I~~~PTi~lf~--~g~~~~~~y~ 447 (464)
|.++||+++++ +|+ .+...
T Consensus 106 v~~~Pt~~lid~~~G~--i~~~~ 126 (144)
T 1o73_A 106 VESIPTLITINADTGA--IIGTQ 126 (144)
T ss_dssp CCSSSEEEEEETTTCC--EEESC
T ss_pred CCCCCEEEEEECCCCe--EEecc
Confidence 99999999998 565 44443
No 165
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.25 E-value=1.9e-11 Score=106.58 Aligned_cols=69 Identities=16% Similarity=0.288 Sum_probs=61.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHcCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 426 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~-----------------------~~~l~~~~~~ 426 (464)
.++++||+||++||++|+.+.|.+.++++++++ .++.|+.|+++.+ +.+++ +.|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLS-KHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHH-HHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHH-HHhC
Confidence 578999999999999999999999999999983 4799999999864 14688 8999
Q ss_pred CCCCCEEEEEe--CCC
Q 012424 427 LGSFPTILFFP--KHS 440 (464)
Q Consensus 427 I~~~PTi~lf~--~g~ 440 (464)
|.++||+++|+ +|+
T Consensus 106 v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 VESIPTLIGVDADSGD 121 (146)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCe
Confidence 99999999998 565
No 166
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.24 E-value=3e-11 Score=121.64 Aligned_cols=106 Identities=9% Similarity=0.167 Sum_probs=89.9
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d--~~~~~l~~~~~~I~~ 429 (464)
+.|.+++.+++..+.. ...++++|+||++||++|+.+.|.|+++++.+++ .+.|+.+|++ .+ ..++ +.|+|.+
T Consensus 117 p~v~~~~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~-~i~f~~vd~~~~~~-~~~~-~~fgi~~ 191 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFIFIDSDHTDN-QRIL-EFFGLKK 191 (361)
T ss_dssp CSEEECSTTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT-TCEEEEECTTSGGG-HHHH-HHTTCCT
T ss_pred CcceecCcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccC-ceEEEEecCChHHH-HHHH-HHcCCCc
Confidence 3588999999998875 2346789999999999999999999999999998 6999999999 56 8999 9999988
Q ss_pred --CCEEEEEeCCCCCeeecC--CCCCCHHHHHHHHHHh
Q 012424 430 --FPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 463 (464)
Q Consensus 430 --~PTi~lf~~g~~~~~~y~--gg~~~~e~L~~fI~~l 463 (464)
+|++++|..++. ...|. ++.++.++|.+|++.+
T Consensus 192 ~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l~~fi~~~ 228 (361)
T 3uem_A 192 EECPAVRLITLEEE-MTKYKPESEELTAERITEFCHRF 228 (361)
T ss_dssp TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHH
T ss_pred cCCccEEEEEcCCc-ccccCCCccccCHHHHHHHHHHH
Confidence 999999988553 34454 4479999999999864
No 167
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.24 E-value=2.5e-11 Score=111.07 Aligned_cols=90 Identities=18% Similarity=0.297 Sum_probs=72.8
Q ss_pred CCC-cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCcHHH
Q 012424 371 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEY 420 (464)
Q Consensus 371 ~~k-~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d-----------------------------~~~~~l 420 (464)
.++ ++||+||++||++|+.+.|.+.++.++|.+.++.|+.|+++ .+ .++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~ 122 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDET-QEV 122 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-CHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCc-hHH
Confidence 455 59999999999999999999999999998756999999984 23 578
Q ss_pred HHHcCCCCCCCEEEEEeCCCCCeee---------cCCCCCCHHHHHHHHHHh
Q 012424 421 AKQKLQLGSFPTILFFPKHSSKPIK---------YPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 421 ~~~~~~I~~~PTi~lf~~g~~~~~~---------y~gg~~~~e~L~~fI~~l 463 (464)
+ +.|+|.++|+++++..++..... +.| ..+.++|.+.|+++
T Consensus 123 ~-~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g-~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 123 A-KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGI-PVTGESIRAALDAL 172 (196)
T ss_dssp H-HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCC-CCCCHHHHHHHHHH
T ss_pred H-HHhCCCCCCeEEEEcCCCeEEEccccCcccccccC-ccCHHHHHHHHHHH
Confidence 8 89999999999999644432222 233 57889999998875
No 168
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.20 E-value=3.4e-11 Score=108.95 Aligned_cols=87 Identities=20% Similarity=0.303 Sum_probs=68.8
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 428 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~~~~~I~ 428 (464)
.++++||+||++||++|+.+.|.+.++.++ ++.|+.|+++.. +..++ +.|+|.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLG-LDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHH-HHcCCC
Confidence 579999999999999999999999999876 488888886332 15678 889999
Q ss_pred CCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++|+++++...+.....+.| ..+.++|.++|+++
T Consensus 132 ~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRHKIVG-VVDQKVWREQLAPL 165 (176)
T ss_dssp SSCEEEEECTTCBEEEEEES-CCCHHHHHHHTHHH
T ss_pred CCCeEEEECCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 99998888654443445555 67888888887654
No 169
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.20 E-value=4.6e-11 Score=120.27 Aligned_cols=91 Identities=14% Similarity=0.109 Sum_probs=75.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC--------------------------CcHHHHHHc
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--------------------------DQKEYAKQK 424 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~--------------------------~~~~l~~~~ 424 (464)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|+++. .+..++ +.
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~-~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATW-TN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHH-HH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHH-HH
Confidence 478999999999999999999999999999987579999998753 114788 89
Q ss_pred CCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 425 LQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 425 ~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
|+|.++|+++|+...++....+.| ..+.++|.++|+++
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~~~~G-~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRHIKFG-EGDYNVTETLVRQL 197 (352)
T ss_dssp TTCCEESEEEEECTTSBEEEEEES-BCCHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 999999999999544433445555 68899999999875
No 170
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.18 E-value=8.5e-11 Score=105.26 Aligned_cols=67 Identities=18% Similarity=0.350 Sum_probs=60.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCc-----------------------HHHHHHcCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQ-----------------------KEYAKQKLQ 426 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~~-----------------------~~l~~~~~~ 426 (464)
.++++||+||++||++|+.+.|.+.+++++|++ .++.|+.|+++... .+++ +.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALT-KKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHH-HHcC
Confidence 578999999999999999999999999999986 57999999988761 4678 8999
Q ss_pred CCCCCEEEEEeC
Q 012424 427 LGSFPTILFFPK 438 (464)
Q Consensus 427 I~~~PTi~lf~~ 438 (464)
|.++||+++++.
T Consensus 126 v~~~Pt~~lid~ 137 (165)
T 3s9f_A 126 VESIPTLIGLNA 137 (165)
T ss_dssp CCSSSEEEEEET
T ss_pred CCCCCEEEEEeC
Confidence 999999999984
No 171
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.18 E-value=9.9e-11 Score=103.95 Aligned_cols=116 Identities=16% Similarity=0.269 Sum_probs=82.1
Q ss_pred cccccccCCCCeeecCcchHHHHHhh-cCCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCCc-
Q 012424 343 EAVADIFNSQNLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ- 417 (464)
Q Consensus 343 ~~~~~~~~~~~v~~L~~~~f~~~i~~-~~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d~~~- 417 (464)
.....+|.+...+. ...+|++.+.. ...+|++||+||++||..|+.|.... .++.+.++. ++.++++|.+..+
T Consensus 13 ~~l~~lf~~p~~~~-~~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~ 90 (153)
T 2dlx_A 13 TTLADLFRPPIDLM-HKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEG 90 (153)
T ss_dssp CCCCCTTSCCTTTS-CCSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHH
T ss_pred hHHHHhhCCchhhh-cccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhH
Confidence 34455555433222 23567766543 23589999999999999999998765 567666654 6999999997542
Q ss_pred HHHHHHcCCCCCCCEEEEEeCC-CCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKH-SSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g-~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
..+. ++|++.++||++||... +...... +| .+.+++.++|+++
T Consensus 91 ~~l~-~~y~v~~~P~~~fld~~~G~~l~~~-~g-~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 91 QRYI-QFYKLGDFPYVSILDPRTGQKLVEW-HQ-LDVSSFLDQVTGF 134 (153)
T ss_dssp HHHH-HHHTCCSSSEEEEECTTTCCCCEEE-SS-CCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCCCCEEEEEeCCCCcEeeec-CC-CCHHHHHHHHHHH
Confidence 5678 89999999999999653 3223334 44 8999999888764
No 172
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.18 E-value=8.2e-11 Score=106.82 Aligned_cols=92 Identities=22% Similarity=0.383 Sum_probs=72.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHcCCCC------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLG------------------ 428 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~----~~l~~~~~~I~------------------ 428 (464)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++..+ ..+. +++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~ 137 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFL-KEANLTRLGYFNDQKAKVFQDLKA 137 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHH-HHTTCCTTCCEECTTCHHHHHHHT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHH-HHcCCCCCceEECCcchHHHHhcc
Confidence 57899999999999999999999999999998557999999998641 4566 677764
Q ss_pred -----CCCEEEEEeCCCCCeeecCCC-CCCHHHHHHHHHHh
Q 012424 429 -----SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 463 (464)
Q Consensus 429 -----~~PTi~lf~~g~~~~~~y~gg-~~~~e~L~~fI~~l 463 (464)
++|+++++...++....+.|. ..+.++|.++|+++
T Consensus 138 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 138 IGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp TTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHH
Confidence 899999995444334455552 23478899999875
No 173
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.17 E-value=5.4e-11 Score=108.33 Aligned_cols=88 Identities=20% Similarity=0.308 Sum_probs=70.9
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCcHHHH
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEYA 421 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d-----------------------------~~~~~l~ 421 (464)
.++++||+||++||++|+.+.|.+.++.++|.+. +.|+.|+++ .+ .+++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET-QEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-SHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc-chHH
Confidence 5799999999999999999999999999999885 999999984 23 5788
Q ss_pred HHcCCCCCCCEEEEEeCCCCCeeecCCC---------CCCHHHHHHHHHHh
Q 012424 422 KQKLQLGSFPTILFFPKHSSKPIKYPSE---------RRDVDSLMAFVDAL 463 (464)
Q Consensus 422 ~~~~~I~~~PTi~lf~~g~~~~~~y~gg---------~~~~e~L~~fI~~l 463 (464)
+.|+|.++|+++++...+. .+.. |. ..+.++|.+.|+++
T Consensus 110 -~~~~v~~~P~~~lid~~G~-i~~~-g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 110 -KAYRALRTPEVFLFDERRL-LRYH-GRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp -HHTTCCEESEEEEECTTCB-EEEE-ECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred -HHcCCCCCCeEEEECCCCc-EEEE-EecCCccccccccCHHHHHHHHHHH
Confidence 8999999999999954442 2322 31 23677888888765
No 174
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.76 E-value=3.7e-12 Score=110.13 Aligned_cols=75 Identities=12% Similarity=0.274 Sum_probs=61.0
Q ss_pred CCC-cEEEEEecCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCc------------------------HHHHHH
Q 012424 371 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQ------------------------KEYAKQ 423 (464)
Q Consensus 371 ~~k-~vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Id~d~~~------------------------~~l~~~ 423 (464)
.++ ++||+||++||++|+.+.|.+.+++++++. .++.++.|+++.+. .+++ +
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 102 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVT-A 102 (143)
Confidence 466 999999999999999999999999999942 36888888887541 2678 8
Q ss_pred cCCCCCCCEEEEEe-CCCCCeeecCC
Q 012424 424 KLQLGSFPTILFFP-KHSSKPIKYPS 448 (464)
Q Consensus 424 ~~~I~~~PTi~lf~-~g~~~~~~y~g 448 (464)
.|+|.++||++++. +|+ .+...|
T Consensus 103 ~~~v~~~P~~~lid~~G~--i~~~~~ 126 (143)
T 2lus_A 103 KYGITGIPALVIVKKDGT--LISMNG 126 (143)
Confidence 99999999999997 665 344443
No 175
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.14 E-value=1.2e-10 Score=109.19 Aligned_cols=89 Identities=19% Similarity=0.367 Sum_probs=71.8
Q ss_pred CCC-cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCcHHH
Q 012424 371 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEY 420 (464)
Q Consensus 371 ~~k-~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d-----------------------------~~~~~l 420 (464)
.++ ++||+||++||++|+.+.|.|.++.++|++.++.|+.|+++ .+ .++
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~-~~~ 135 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDAS-QSV 135 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTT-CHH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCc-cHH
Confidence 456 49999999999999999999999999998767999999994 23 578
Q ss_pred HHHcCCCCCCCEEEEEeCCCCCeeecCC----------CCCCHHHHHHHHHHh
Q 012424 421 AKQKLQLGSFPTILFFPKHSSKPIKYPS----------ERRDVDSLMAFVDAL 463 (464)
Q Consensus 421 ~~~~~~I~~~PTi~lf~~g~~~~~~y~g----------g~~~~e~L~~fI~~l 463 (464)
+ +.|+|.++|+++++...++ +.|.| +..+.++|.+.|+++
T Consensus 136 ~-~~~~v~~~P~~~liD~~G~--i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 136 A-KAYGAACTPDFFLYDRERR--LVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp H-HHHTCCEESEEEEECTTCB--EEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred H-HHcCCCCCCeEEEECCCCc--EEEeccccccccccccccCHHHHHHHHHHH
Confidence 8 8999999999999954442 22322 234578888888765
No 176
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.75 E-value=4.2e-12 Score=112.35 Aligned_cols=88 Identities=10% Similarity=0.107 Sum_probs=66.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHH-HHHHhc-CCCeEEEEEEcCCCcHHHHHHcCC----------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVE-LADKLA-GNGVKVGKFRADGDQKEYAKQKLQ---------------------- 426 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~-la~~~~-~~~v~~~~Id~d~~~~~l~~~~~~---------------------- 426 (464)
.++++||+||++||++|+.+.|.+.+ +.+.+. +.++.|+.|+++.+ .+.. ++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~-~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP-LEKV-LAFAKSTGVTYPLGLDPGADIFAKYA 109 (159)
Confidence 57899999999999999999999998 988887 45799999998876 4433 3333
Q ss_pred --CCCCCEEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 427 --LGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 --I~~~PTi~lf-~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+.++|+++++ ++|+. ...+.| .+.+++.++|+++
T Consensus 110 ~~~~~~P~~~lid~~G~i-~~~~~g--~~~~~l~~~l~~l 146 (159)
T 2ls5_A 110 LRDAGITRNVLIDREGKI-VKLTRL--YNEEEFASLVQQI 146 (159)
Confidence 5779999999 55552 233333 5666787777765
No 177
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.11 E-value=2.2e-10 Score=101.86 Aligned_cols=91 Identities=13% Similarity=0.075 Sum_probs=71.3
Q ss_pred CCCc-EEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC---------------------CCcHHHHHHcCCC
Q 012424 371 RQEP-WLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD---------------------GDQKEYAKQKLQL 427 (464)
Q Consensus 371 ~~k~-vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d---------------------~~~~~l~~~~~~I 427 (464)
.++. +||+|| ++||++|+.+.|.+.++.++|++.++.|+.|+.| .+ .+++ +.|+|
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 104 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPD-KKIR-ELYGA 104 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTT-SHHH-HHTTC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCc-HHHH-HHcCC
Confidence 4666 999999 9999999999999999999998767999999987 34 6788 89999
Q ss_pred CC----CCEEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 012424 428 GS----FPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~----~PTi~lf~~g~~~~~~y~gg---~~~~e~L~~fI~~l 463 (464)
.+ +|+++++...+.....+.|. ..+.+++.+.|+++
T Consensus 105 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 105 KGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp CCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred CCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 99 99999996444333344441 23456677777665
No 178
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.11 E-value=2.1e-10 Score=109.57 Aligned_cols=93 Identities=14% Similarity=0.324 Sum_probs=76.5
Q ss_pred chHHHHHhhcCCCCcEEEEEecCC--ChhHHhhHHHHHHHHHHh---cCCC--eEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKL---AGNG--VKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~w--C~~C~~~~p~~~~la~~~---~~~~--v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
+.|++++. +-.++++|.||++| |++|+.+.+.++++++.+ ++ + |.|+++|++.+ ++++ ++|+|.++||
T Consensus 15 ~ql~~~~~--~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~-~~~v~~~~vd~d~~-~~~~-~~~gv~~~Pt 89 (243)
T 2hls_A 15 RELRETLA--EMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNG-GKLLKLNVYYRESD-SDKF-SEFKVERVPT 89 (243)
T ss_dssp HHHHHHHT--TCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETT-EESEEEEEEETTTT-HHHH-HHTTCCSSSE
T ss_pred HHHHHHHH--hCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCC-CceeEEEEecCCcC-HHHH-HhcCCCcCCE
Confidence 44555553 34689999999999 999999999999999885 22 2 99999999999 9999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
+++| +| ...|.| ..+.+++..|+..
T Consensus 90 ~~i~-~g---~~~~~G-~~~~~~l~~fv~~ 114 (243)
T 2hls_A 90 VAFL-GG---EVRWTG-IPAGEEIRALVEV 114 (243)
T ss_dssp EEET-TT---TEEEES-CCCTTHHHHHHHH
T ss_pred EEEE-CC---ceeEcC-CCcHHHHHHHHHH
Confidence 9999 55 567766 4666778887765
No 179
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=99.08 E-value=2.3e-10 Score=107.00 Aligned_cols=179 Identities=13% Similarity=0.137 Sum_probs=102.4
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCCh-HHHH-HHHHhcCCCCC
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDA-VEVQ-ALVRSKGLFSF 189 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~-~~~~-~~~~~~g~~~~ 189 (464)
++++|++|||+||+++ +++.+.+.++..+++|+|....+..++++++++++|++++++.... .... ..+....+...
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~~~~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDMSLLNQLAPNALTRNDIEIE 83 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEECGGGGGGSTGGGC-------
T ss_pred CCEEEEccCcHHHHHHHHHHHHcCCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeChHHhhhccccccccccccc
Confidence 4699999999999766 8888877788899999997555678999999999999988775432 1100 00000000000
Q ss_pred C--Ccchhh--hhhcccc-chHHHHhc--cCcEEEEeeeccCCcccccCCc----eeecCCCCcCccCCCCCeEEEEeCc
Q 012424 190 Y--EDGHQE--CCRVRKV-RPLRRALK--GLRAWITGQRKDQSPGTRSEIP----VVQVDPVFEGLEGGVGSLVKWNPVA 258 (464)
Q Consensus 190 ~--~~~~~~--Cc~~~Kv-~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~----~~~~d~~~~~~~~~~~~~~k~~PI~ 258 (464)
+ ...... .|+..+. .-+.++.+ +.+++++|...+|..+.|...+ .+..-... . ...++..++||+
T Consensus 84 ~~~~~~~~~~~~~r~~~~~~~~~~~a~~~g~~~i~tG~~~dd~~~~~~~~~~~~~~l~~~~~~-~---~~~~~~ii~PL~ 159 (219)
T 3bl5_A 84 VKDGELPSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNL-A---MEKPFVIHTPLM 159 (219)
T ss_dssp -------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC----CCGGGSHHHHHHHHHHHHH-H---HTSCCEEECTTT
T ss_pred ccccCCCCceeechHHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCHHHHHHHHHHHHh-c---cCCCeEEEeccc
Confidence 0 001111 2333333 23233333 6679999999888531111100 01000000 0 002456789999
Q ss_pred cCcHHHHHHHHHhcCCC---cchhhhc--CCcccCccCCCcc
Q 012424 259 NVKGNDIWNFLRTMDVP---INSLHSQ--GYISIGCEPCTRP 295 (464)
Q Consensus 259 dWt~~DVw~yi~~~~lp---~npLy~~--Gy~siGC~~CT~~ 295 (464)
+|+..||+.|.+.+++| ++.-+.+ |..+++|-.|+.-
T Consensus 160 ~~~K~ei~~~a~~~glp~~~~~~t~sc~~~~~~~~CG~C~~C 201 (219)
T 3bl5_A 160 WLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECPAC 201 (219)
T ss_dssp TCCHHHHHHHHHHTTCHHHHHHHCCCSTTSCCSSCCSCSHHH
T ss_pred cCCHHHHHHHHHHcCCCccchhheeeccCCCCCCCCCCCHHH
Confidence 99999999999999994 2333332 3333778888653
No 180
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.08 E-value=2.3e-11 Score=118.88 Aligned_cols=71 Identities=17% Similarity=0.312 Sum_probs=57.6
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------CCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCC
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPS 448 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d------~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~g 448 (464)
.+|+||||||+||++++|.|++++++++ ++|++ ++ ++++ ++|+|+++||+++ +|+ . +.|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------~Vd~d~~d~~~~~-~~la-~~~gI~~vPT~~i--~G~--~--~~G 264 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTWII--NGR--T--YTG 264 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCSSCSSSCC-CHHH-HTTTCCSTTEEEE--TTE--E--EES
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC-------EEEEeecCchhhH-HHHH-HHcCCcccCeEEE--CCE--E--ecC
Confidence 4799999999999999999999986652 34444 24 8999 9999999999654 665 2 666
Q ss_pred CCCCHHHHHHHHH
Q 012424 449 ERRDVDSLMAFVD 461 (464)
Q Consensus 449 g~~~~e~L~~fI~ 461 (464)
.++.++|.+|++
T Consensus 265 -~~~~~~L~~~l~ 276 (291)
T 3kp9_A 265 -VRSLEALAVASG 276 (291)
T ss_dssp -CCCHHHHHHHTC
T ss_pred -CCCHHHHHHHHC
Confidence 799999999874
No 181
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.06 E-value=1.1e-10 Score=108.45 Aligned_cols=144 Identities=15% Similarity=0.196 Sum_probs=98.5
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHH---HHhcCCCC
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQAL---VRSKGLFS 188 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~---~~~~g~~~ 188 (464)
.+++|++|||+||+++ +++.+.+.++.++++|+|... ..++++++++++|++++++......+... ....+.
T Consensus 7 ~kv~v~~SGG~DS~~ll~ll~~~g~~v~~~~v~~~~~~--~~~~~~~~a~~lgi~~~~~~~~~~~~~~~~~~~~~~~~-- 82 (203)
T 3k32_A 7 MDVHVLFSGGKDSSLSAVILKKLGYNPHLITINFGVIP--SYKLAEETAKILGFKHKVITLDRKIVEKAADMIIEHKY-- 82 (203)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTTEEEEEEEEECSSSC--TTHHHHHHHHHHTCEEEEEECCTHHHHHHHHHHHHHSS--
T ss_pred CeEEEEEECcHHHHHHHHHHHHcCCCeEEEEEeCCCch--HHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCC--
Confidence 3599999999999766 888887778899999999765 56899999999999998876554322211 122221
Q ss_pred CCCcchhhhhhccccchHHHHhccCcEEEEeeeccCCcc--cccCCceeecCCCCcCccCCCCCeEEEEeCccCcHHHHH
Q 012424 189 FYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPG--TRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIW 266 (464)
Q Consensus 189 ~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~R~~ES~~--~R~~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw 266 (464)
....|.. .+...+.++.++.++++||...|+... .|..+..+. .. .++.-++||+.|+..||+
T Consensus 83 ----~~~~c~~-~~~~~l~~~A~g~~~i~tGh~~dD~~et~~~~gl~~~~--~~--------~~~~iirPLl~~~k~eI~ 147 (203)
T 3k32_A 83 ----PGPAIQY-VHKTVLEILADEYSILADGTRRDDRVPKLSYSEIQSLE--MR--------KNIQYITPLMGFGYKTLR 147 (203)
T ss_dssp ----SHHHHHH-HHHHHHHHHTTTCSEEECCCCTTCCSSCCCHHHHHHHH--HH--------HTCEEECGGGGCCHHHHH
T ss_pred ----CccHHHH-HHHHHHHHHhcCCCEEEECCCcccchhhcchhhccCcc--cc--------cCCeEEeccCCCCHHHHH
Confidence 1234544 344456655558889999999998641 111111110 00 134568899999999999
Q ss_pred HHHHhcCCCc
Q 012424 267 NFLRTMDVPI 276 (464)
Q Consensus 267 ~yi~~~~lp~ 276 (464)
+|.+++ +++
T Consensus 148 ~~a~~~-l~~ 156 (203)
T 3k32_A 148 HLASEF-FIL 156 (203)
T ss_dssp HHHHHH-EEE
T ss_pred HHHHHh-CCc
Confidence 999998 544
No 182
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.04 E-value=6e-10 Score=101.90 Aligned_cols=91 Identities=15% Similarity=0.219 Sum_probs=69.1
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------CcH---HHH-H-----------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQK---EYA-K----------------- 422 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------~~~---~l~-~----------------- 422 (464)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|++|. ... +++ +
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 578999999999999999999999999999987679999999873 101 122 0
Q ss_pred -----------HcCCCCCCC------EEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 423 -----------QKLQLGSFP------TILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 -----------~~~~I~~~P------Ti~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+.|++.++| +++++. +|+ ....+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 183 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGV-PVERFSP-GASVKDIEKKLIPL 183 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSC-EEEEECT-TCCHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCc-EEEEECC-CCCHHHHHHHHHHH
Confidence 124778889 777774 555 2444555 68899999988865
No 183
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.04 E-value=5e-10 Score=99.53 Aligned_cols=91 Identities=15% Similarity=0.216 Sum_probs=66.8
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHH-HHHcC--------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEY-AKQKL-------------- 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------~~---~~l-~~~~~-------------- 425 (464)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|+++. .. .++ . +++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVT-EKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH-HHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHH-HhcCCCCceEEEEeecC
Confidence 578999999999999999999999999999987679999999863 10 122 1 111
Q ss_pred ---------------C-----CCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 ---------------Q-----LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ---------------~-----I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+ |..+|+++++...++....+.| ..+.++|.+.|+++
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSP-TTAPYDIEGDIMEL 165 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCC-CCCHHHHHHHHHHH
Confidence 3 3446888888544433445555 57788888888765
No 184
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.04 E-value=7.2e-10 Score=101.16 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=68.1
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------CcHHHHH--H-c----------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQKEYAK--Q-K---------------- 424 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------~~~~l~~--~-~---------------- 424 (464)
+++++||+||++||++|+.+.|.+.++.++|++.++.|+.|++|. ...++.. + +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 579999999999999999999999999999987679999998862 1122220 1 1
Q ss_pred ----------------CCCCCCC---EEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 425 ----------------LQLGSFP---TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 425 ----------------~~I~~~P---Ti~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++..+| +++++...+.....+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g-~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSP-GASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECT-TCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECC-CCCHHHHHHHHHHH
Confidence 1334567 88888544433445555 68899999999875
No 185
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.03 E-value=3.1e-10 Score=100.98 Aligned_cols=90 Identities=13% Similarity=0.205 Sum_probs=68.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHH-cC--------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQ-KL-------------- 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------~~---~~l~~~-~~-------------- 425 (464)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|++|. .. .+++ + ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFV-CTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHH-HHhcCCCceeEeeeccCC
Confidence 579999999999999999999999999999987679999999863 21 2334 3 33
Q ss_pred ---------------CC--CCCC---EEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 ---------------QL--GSFP---TILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ---------------~I--~~~P---Ti~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++ .++| +++++. +|+ ....+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQ-VVDRYYP-TTSPLSLERDIKQL 166 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSC-EEEEECT-TSCGGGGHHHHHHH
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCC-EEEeeCC-CCCHHHHHHHHHHH
Confidence 34 5678 777775 555 3444555 67888899988876
No 186
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.03 E-value=5.6e-10 Score=98.67 Aligned_cols=90 Identities=9% Similarity=0.101 Sum_probs=71.4
Q ss_pred CCCcEEEEEecCCChh-HHhhHHHHHHHHHHhcC----CCeEEEEEEcCCCc---------------------------H
Q 012424 371 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG----NGVKVGKFRADGDQ---------------------------K 418 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~-C~~~~p~~~~la~~~~~----~~v~~~~Id~d~~~---------------------------~ 418 (464)
.++++||+||++||++ |+.+.|.+.++.+++++ .++.|+.|++|.+. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999864 37999999987530 1
Q ss_pred HHHHHcCCCCCCC---------------EEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 419 EYAKQKLQLGSFP---------------TILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 419 ~l~~~~~~I~~~P---------------Ti~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++ +.|+|..+| +++++. +|+ ....+.| ..+.++|.+.|+++
T Consensus 102 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVA-RAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGE-FLDYFGQ-NKRKGEIAASIATH 159 (164)
T ss_dssp HHH-HTTTCCEEEEEECTTSCEEEEECCEEEEECTTSC-EEEEEET-TCCHHHHHHHHHHH
T ss_pred HHH-HhcCeEEEecCCCCCCCeeEeccceEEEECCCCe-EEEEeCC-CCCHHHHHHHHHHH
Confidence 377 899999999 677775 555 2344444 68899999888765
No 187
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.02 E-value=9.7e-10 Score=97.94 Aligned_cols=90 Identities=13% Similarity=0.108 Sum_probs=71.4
Q ss_pred CCCcEEEEEecCCChh-HHhhHHHHHHHHHHhcC----CCeEEEEEEcCCC--c-------------------------H
Q 012424 371 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG----NGVKVGKFRADGD--Q-------------------------K 418 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~-C~~~~p~~~~la~~~~~----~~v~~~~Id~d~~--~-------------------------~ 418 (464)
.++++||+||++||++ |+.+.|.+.++.++++. .++.|+.|++|.+ . .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999952 3799999998842 0 1
Q ss_pred HHHHHcCCCCCCC---------------EEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 419 EYAKQKLQLGSFP---------------TILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 419 ~l~~~~~~I~~~P---------------Ti~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.++ +.|+|..+| +++++. +|+ ....+.| ..+.++|.+.|+++
T Consensus 105 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~l~~l 162 (171)
T 2rli_A 105 QAS-HSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGL-FTDYYGR-SRSAEQISDSVRRH 162 (171)
T ss_dssp HHH-HHSCCCCEECCCCSSCCCCEECCCEEEEECTTSC-EEEEEES-SCCHHHHHHHHHHH
T ss_pred HHH-HHhCeEEEecCCCCCCCeEEeccceEEEECCCCe-EEEEECC-CCCHHHHHHHHHHH
Confidence 577 789999888 777775 555 2344555 68899999988865
No 188
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=99.01 E-value=6.2e-10 Score=113.71 Aligned_cols=146 Identities=18% Similarity=0.246 Sum_probs=95.0
Q ss_pred cEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHH----HHHHHhcCC
Q 012424 114 DIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEV----QALVRSKGL 186 (464)
Q Consensus 114 ~i~vafSGGKDS~ll-~L~~~~-~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl-~i~~~~p~~~~~----~~~~~~~g~ 186 (464)
+++|+||||+||+++ +++.+. +.++..+++|+|. ++.+++++++++++|+ +++++....... ...+.....
T Consensus 2 kVvva~SGG~DSsvll~ll~~~~g~~V~av~vd~g~--~~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~~~ 79 (400)
T 1kor_A 2 KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQ--GEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAV 79 (400)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSC--SSCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCC
T ss_pred cEEEEEeChHHHHHHHHHHHHhhCCcEEEEEEeCCC--HHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHhhHHHHHcCCc
Confidence 589999999998765 888776 8889999999997 6779999999999999 677764332111 112222211
Q ss_pred CC-CCC---cchhhhhhccccchHHHHhc--cCcEEEEeeecc---CCcccccCCceeecCCCCcCccCCCCCeEEEEeC
Q 012424 187 FS-FYE---DGHQECCRVRKVRPLRRALK--GLRAWITGQRKD---QSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPV 257 (464)
Q Consensus 187 ~~-~~~---~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~---ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~~PI 257 (464)
+. -+. ...+.|.. ..+.++.+ +.+++++|.+.+ |+ |......... +.+-.+.||
T Consensus 80 ~e~~y~~g~~~~R~~~~----~~L~~~A~~~G~~~IatG~~~d~nDq~---~f~~g~~~l~----------p~l~ii~PL 142 (400)
T 1kor_A 80 YEGYYLLGTSIARPLIA----KHLVRIAEEEGAEAIAHGATGKGNDQV---RFELTAYALK----------PDIKVIAPW 142 (400)
T ss_dssp BTTTBCCTTTTHHHHHH----HHHHHHHHHHTCSEEECCCCTTSSHHH---HHHHHHHHHC----------TTCEEECGG
T ss_pred cccccccCCccchHHHH----HHHHHHHHHcCCCEEEECCCCCcccHH---HHHHHHHhcC----------CCCEEEEee
Confidence 10 011 11222322 33444443 677999999985 33 2211111111 123459999
Q ss_pred ccC---cHHHHHHHHHhcCCCcch
Q 012424 258 ANV---KGNDIWNFLRTMDVPINS 278 (464)
Q Consensus 258 ~dW---t~~DVw~yi~~~~lp~np 278 (464)
.+| +..|||.|++.++||+..
T Consensus 143 ~~~~~~tK~eI~~ya~~~gip~~~ 166 (400)
T 1kor_A 143 REWSFQGRKEMIAYAEAHGIPVPV 166 (400)
T ss_dssp GTCCCCSHHHHHHHHHHTTCCCC-
T ss_pred cccccCCHHHHHHHHHHcCCCccc
Confidence 999 999999999999999874
No 189
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.01 E-value=5.4e-10 Score=98.70 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=71.7
Q ss_pred CCC-cEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------CcHHHHHHcC
Q 012424 371 RQE-PWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----------------------DQKEYAKQKL 425 (464)
Q Consensus 371 ~~k-~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-----------------------~~~~l~~~~~ 425 (464)
.++ ++||+|| ++||++|+.+.|.+.++.+++++.++.|+.|++|. + ..++ +.|
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~-~~~ 111 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPH-GAVS-QAY 111 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTT-THHH-HHT
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcC-hHHH-HHc
Confidence 355 8999998 99999999999999999999976679999999874 4 6788 899
Q ss_pred CCC----CCC--EEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHhC
Q 012424 426 QLG----SFP--TILFFPKHSSKPIKYPSE---RRDVDSLMAFVDALR 464 (464)
Q Consensus 426 ~I~----~~P--Ti~lf~~g~~~~~~y~gg---~~~~e~L~~fI~~l~ 464 (464)
++. ++| +++++...+.....+.|. ..+.+++.+.|++++
T Consensus 112 ~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 112 GVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 159 (160)
T ss_dssp TCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHTC
T ss_pred CCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 998 999 777775444333334342 236788888888764
No 190
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=99.01 E-value=5.3e-10 Score=91.83 Aligned_cols=79 Identities=13% Similarity=0.205 Sum_probs=64.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPS 448 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d--~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~g 448 (464)
.+.+.|++|+++||++|+.+.+.|+++++ ++.|..+|++ .+ ++++ ++|+ .++|++ |.+|+ ... .+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~-----~i~~~~vdi~~~~~-~el~-~~~g-~~vP~l--~~~g~--~~~-~~ 80 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD-----RFILQEVDITLPEN-STWY-ERYK-FDIPVF--HLNGQ--FLM-MH 80 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS-----SSEEEEEETTSSTT-HHHH-HHSS-SSCSEE--EESSS--EEE-ES
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh-----CCeEEEEECCCcch-HHHH-HHHC-CCCCEE--EECCE--EEE-ec
Confidence 45678999999999999999999987642 4899999998 67 8999 8999 999986 45776 333 33
Q ss_pred CCCCHHHHHHHHHHh
Q 012424 449 ERRDVDSLMAFVDAL 463 (464)
Q Consensus 449 g~~~~e~L~~fI~~l 463 (464)
..+.++|.++|+++
T Consensus 81 -g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 81 -RVNTSKLEKQLRKL 94 (100)
T ss_dssp -SCCHHHHHHHHHSS
T ss_pred -CCCHHHHHHHHHHH
Confidence 37899999999864
No 191
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.00 E-value=1.1e-09 Score=116.05 Aligned_cols=96 Identities=11% Similarity=0.121 Sum_probs=79.8
Q ss_pred eecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012424 355 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 434 (464)
Q Consensus 355 ~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~ 434 (464)
..++++.++.+.. ...+..++.||++||++|+.+.|.+++++..+. ++.+.++|.+.+ ++++ ++|+|.++||++
T Consensus 102 ~~~~~~~~~~i~~--~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~-~~~~-~~~~i~svPt~~ 175 (521)
T 1hyu_A 102 SKEAQSLLEQIRD--IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF-QNEI-TERNVMGVPAVF 175 (521)
T ss_dssp CCSCHHHHHHHHH--CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC-HHHH-HHTTCCSSSEEE
T ss_pred CCCCHHHHHHHHh--cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh-HHHH-HHhCCCccCEEE
Confidence 4566777777653 245678999999999999999999999998876 599999999999 9999 999999999997
Q ss_pred EEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 435 FFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 435 lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
+ +|+ .+.. | ..+.++|.+++++
T Consensus 176 i--~g~--~~~~-G-~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 176 V--NGK--EFGQ-G-RMTLTEIVAKVDT 197 (521)
T ss_dssp E--TTE--EEEE-S-CCCHHHHHHHHCC
T ss_pred E--CCE--EEec-C-CCCHHHHHHHHhh
Confidence 7 776 4433 5 7899999999764
No 192
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=99.00 E-value=1.4e-09 Score=112.61 Aligned_cols=156 Identities=16% Similarity=0.188 Sum_probs=105.0
Q ss_pred HHHHHHHcCCcEEEEechhHHHHHH-HHHHH-----cCCCeEEEEEeCCCC--cHHHHHHHHHHHHHhCCcEEEEcCChH
Q 012424 104 MDRALEKFGNDIAIAFSGAEDVALI-EYAHL-----TGRPFRVFSLDTGRL--NPETYRFFDEVEKHFGIRIEYMFPDAV 175 (464)
Q Consensus 104 l~~a~~~~~~~i~vafSGGKDS~ll-~L~~~-----~~~~i~vv~~DTg~~--fpeT~~~~~~~~~~~gl~i~~~~p~~~ 175 (464)
|...+.. +++|+|++|||+||++| |++.+ .+.++.++|+|.|.. ..+-.++++++++++|+++++..-+..
T Consensus 6 l~~~l~~-~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~~~~~ 84 (433)
T 1ni5_A 6 LNRQLLT-SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLA 84 (433)
T ss_dssp HHHHHTT-CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred HHHhcCC-CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEecCC
Confidence 3444444 45699999999999766 77776 455688999999974 356789999999999999988754321
Q ss_pred HHHHHHHhcCCCCCCCcchhhhhhccccchHHHHhccCcEEEEeeeccCCccc------ccC-CceeecCCCCcCccCCC
Q 012424 176 EVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGT------RSE-IPVVQVDPVFEGLEGGV 248 (464)
Q Consensus 176 ~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~R~~ES~~~------R~~-~~~~~~d~~~~~~~~~~ 248 (464)
..| .+....|+..+-.-+.+..++.+.+++|...++...+ |.. ...+..-+... ..
T Consensus 85 -------~~~------~~~e~~aR~~Ry~~l~~~a~~~~~i~tgH~~dD~aEt~L~~l~RG~g~~gL~gm~~~~----~~ 147 (433)
T 1ni5_A 85 -------QEG------LGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVS----EF 147 (433)
T ss_dssp -------CSS------STTTTHHHHHHHHHHHHTCCTTEEEECCCCHHHHHHHHHHHHTTTCCTTGGGCCCSEE----EE
T ss_pred -------CCC------CCHHHHHHHHHHHHHHHHHhhCCeEEeeccchHHHHHHHHHHHcCCCcccccCCCCcc----cc
Confidence 111 1233456666666666666677899999988875311 211 00000000000 00
Q ss_pred CCeEEEEeCccCcHHHHHHHHHhcCCCcc
Q 012424 249 GSLVKWNPVANVKGNDIWNFLRTMDVPIN 277 (464)
Q Consensus 249 ~~~~k~~PI~dWt~~DVw~yi~~~~lp~n 277 (464)
++...++||++|+..||.+|.+.+++|+.
T Consensus 148 ~~~~iiRPLl~~~k~eI~~y~~~~gl~~~ 176 (433)
T 1ni5_A 148 AGTRLIRPLLARTRGELVQWARQYDLRWI 176 (433)
T ss_dssp TTEEEECGGGSCCHHHHHHHHHHTTCCCB
T ss_pred CCceEEccCccCCHHHHHHHHHHcCCCeE
Confidence 23567899999999999999999999984
No 193
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=98.99 E-value=2.5e-09 Score=111.69 Aligned_cols=152 Identities=18% Similarity=0.132 Sum_probs=103.4
Q ss_pred CcEEEEechhHHHHHH-HHHHH----cCCCeEEEEEeCCCC---cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhc
Q 012424 113 NDIAIAFSGAEDVALI-EYAHL----TGRPFRVFSLDTGRL---NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSK 184 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~----~~~~i~vv~~DTg~~---fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~ 184 (464)
.+++|++|||+||++| |++.+ .+.++.++|+|.|.. -.+..++++++++++|++++++.-+... +....
T Consensus 19 ~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~~~~~~---~~~~~ 95 (464)
T 3a2k_A 19 AAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPA---FQRSA 95 (464)
T ss_dssp SBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEECCCHH---HHTTT
T ss_pred CEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEEechhh---hhhcc
Confidence 5699999999999766 77766 466789999999976 2467899999999999999887654322 22122
Q ss_pred CCCCCCCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCccc------ccCCc-eee-cCCCCcCccCCCCCeEEE
Q 012424 185 GLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGT------RSEIP-VVQ-VDPVFEGLEGGVGSLVKW 254 (464)
Q Consensus 185 g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~------R~~~~-~~~-~d~~~~~~~~~~~~~~k~ 254 (464)
+. +....|+..+-.-+.++.. +.+.++||...++...+ |..-. -+. ..+. . ..++...+
T Consensus 96 ~~------~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~dD~aEt~L~~l~rG~g~~gL~gm~~~----~-~~~~~~ii 164 (464)
T 3a2k_A 96 GL------GAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQVETILMRLVRGSTSKGYAGIPVK----R-PFHGGYLI 164 (464)
T ss_dssp TC------CSHHHHHHHHHHHHHHHHHTTTCCEEECCCCHHHHHHHHHHHHHHCCCSSSTTCSCSE----E-ECSSSEEE
T ss_pred CC------CHHHHHHHHHHHHHHHHHHHcCcCEEEEeCChHHHHHHHHHHHHcCCCcccccCCCcc----c-cCCCCEEE
Confidence 21 2344566666666766665 56789999988874311 21110 000 0000 0 00123568
Q ss_pred EeCccCcHHHHHHHHHhcCCCcch
Q 012424 255 NPVANVKGNDIWNFLRTMDVPINS 278 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~~lp~np 278 (464)
+||++|+..||.+|.+.+++|+..
T Consensus 165 RPLl~~~k~eI~~ya~~~gl~~~~ 188 (464)
T 3a2k_A 165 RPFLAVSRAEIEAYCRQMGLSPRC 188 (464)
T ss_dssp CGGGGSCHHHHHHHHHHTCCSSCS
T ss_pred CCCccCcHHHHHHHHHHcCCCeEE
Confidence 999999999999999999999854
No 194
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.99 E-value=5.7e-10 Score=100.07 Aligned_cols=90 Identities=18% Similarity=0.220 Sum_probs=66.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHH-H-----------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYA-K----------------- 422 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------~~---~~l~-~----------------- 422 (464)
.++++||+||++||++|+ +.|.+.++.+++.+.++.|+.|+++. .. .+++ +
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 578999999999999999 99999999999987679999998741 10 1111 0
Q ss_pred -----------HcCCCCCCC------EEEEEe-CCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 423 -----------QKLQLGSFP------TILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 -----------~~~~I~~~P------Ti~lf~-~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+.|++.++| +++++. +|+ ....+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGK-VYERYSS-LTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSC-EEEEECT-TSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCC-EEEEeCC-CCCHHHHHHHHHHH
Confidence 246788999 777774 555 3444555 67888888888765
No 195
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.98 E-value=3.4e-10 Score=102.72 Aligned_cols=90 Identities=18% Similarity=0.188 Sum_probs=68.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHHc-C--------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQK-L-------------- 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------~~---~~l~~~~-~-------------- 425 (464)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|+++. .. .+++ ++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFA-RRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHH-HhhcCCCceeEeecccCC
Confidence 578999999999999999999999999999987679999999874 21 2233 22 1
Q ss_pred ---------CCCCCC-------EEEEE-eCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 ---------QLGSFP-------TILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ---------~I~~~P-------Ti~lf-~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.+..+| +++++ ++|+ ....+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~-i~~~~~g-~~~~~~l~~~i~~l 179 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGK-VVGAWDP-TVSVEEVRPQITAL 179 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSC-EEEEECT-TSCHHHHHHHHHTT
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCC-EEEEeCC-CCCHHHHHHHHHHH
Confidence 244578 66666 4555 3445555 68899999999876
No 196
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.96 E-value=1.2e-10 Score=91.39 Aligned_cols=74 Identities=18% Similarity=0.254 Sum_probs=53.1
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-CCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCH
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 453 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d-~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~ 453 (464)
-++.||++||++|+.+.+.++++.++++. .+.++.||.+ .+ .+++ ++|++.++||+++ +|+ .. +.|+..+.
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~-~~~~-~~~gv~~vPt~~i--~g~--~~-~~G~~~~~ 74 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKAR-IAEA-EKAGVKSVPALVI--DGA--AF-HINFGAGI 74 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSST-HHHH-HHHTCCEEEEEEE--TTE--EE-EEEEEEEH
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhh-HHHH-HHcCCCcCCEEEE--CCE--EE-EeccCcCH
Confidence 47889999999999999999998776532 3455555544 34 7888 8999999999977 665 22 23423355
Q ss_pred HHH
Q 012424 454 DSL 456 (464)
Q Consensus 454 e~L 456 (464)
++|
T Consensus 75 ~~l 77 (80)
T 2k8s_A 75 DDL 77 (80)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 197
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.96 E-value=1.2e-09 Score=100.39 Aligned_cols=92 Identities=14% Similarity=0.254 Sum_probs=73.5
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHcC
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~------------------------~~~l~~~~~ 425 (464)
.++++||+|| ++||++|+.+.|.+.++.++|++.++.|+.|++|.. +.+++ +.|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELS-QAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHH-HHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHH-HHh
Confidence 4689999999 999999999999999999999876799999998741 15678 789
Q ss_pred CCC-----CCCEEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 012424 426 QLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~-----~~PTi~lf~~g~~~~~~y~gg---~~~~e~L~~fI~~l 463 (464)
+|. .+|+++++...++....+.|. ..+.++|.+.|+++
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 999 999999996444323333331 24789999999876
No 198
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.95 E-value=2.3e-09 Score=96.98 Aligned_cols=45 Identities=22% Similarity=0.172 Sum_probs=41.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 415 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~ 415 (464)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|+++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 578999999999999999999999999999988679999998764
No 199
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.94 E-value=1.3e-09 Score=98.95 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=67.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHHcC---------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQKL--------------- 425 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------~~---~~l~~~~~--------------- 425 (464)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|+++. .. .+++ +++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHH-HHcCCCceEEeeeccCCc
Confidence 578999999999999999999999999999987679999999863 10 1222 222
Q ss_pred ----------------C-----CCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 426 ----------------Q-----LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ----------------~-----I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+ |..+|+++++...+.....+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECT-TSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCC-CCCHHHHHHHHHHh
Confidence 2 3335998888544433445555 67888999888765
No 200
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.94 E-value=6.1e-10 Score=99.23 Aligned_cols=90 Identities=19% Similarity=0.212 Sum_probs=70.5
Q ss_pred CCCcEEEEEecCCChh-HHhhHHHHHHHHHHhcCC---CeEEEEEEcCCC--c-------------------------HH
Q 012424 371 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAGN---GVKVGKFRADGD--Q-------------------------KE 419 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~-C~~~~p~~~~la~~~~~~---~v~~~~Id~d~~--~-------------------------~~ 419 (464)
.++++||+||++||++ |+.+.|.+.++.+++++. ++.|+.|++|.+ . ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5789999999999997 999999999999998742 699999998853 1 14
Q ss_pred HHHHcCC---------------CCCCCEEEEEeCCCCCeeecCCCCC--CHHHHHHHHHHh
Q 012424 420 YAKQKLQ---------------LGSFPTILFFPKHSSKPIKYPSERR--DVDSLMAFVDAL 463 (464)
Q Consensus 420 l~~~~~~---------------I~~~PTi~lf~~g~~~~~~y~gg~~--~~e~L~~fI~~l 463 (464)
++ +.|+ |.++|+++++++|+ ....+.| .. +.++|.+.|+++
T Consensus 114 ~~-~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~-i~~~~~g-~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AA-QTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGR-LVLLYSP-DKAEATDRVVADLQAL 171 (172)
T ss_dssp HH-HHHTCCEEEEEEEETTEEEEEECCCEEEEETTE-EEEEECH-HHHTCHHHHHHHHHHC
T ss_pred HH-HhcCeEEEeccCCCCCCceEecCCEEEEEECCE-EEEEECC-CCCCCHHHHHHHHHHh
Confidence 55 4554 46789999999444 3445555 46 899999999876
No 201
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.93 E-value=1e-09 Score=99.99 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=72.7
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHcC
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~------------------------~~~l~~~~~ 425 (464)
.++++||+|| ++||++|+.+.|.+.++.++|++.++.|+.|++|.. +.+++ +.|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTIS-RQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHH-HHh
Confidence 4689999999 999999999999999999999865799999998741 25788 899
Q ss_pred CCC------CCCEEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 012424 426 QLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~------~~PTi~lf~~g~~~~~~y~gg---~~~~e~L~~fI~~l 463 (464)
++. .+|+++++...+.....+.|. ..+.++|.+.|+++
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 998 999999995444323333331 13788899988875
No 202
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.93 E-value=8.5e-10 Score=101.48 Aligned_cols=92 Identities=13% Similarity=0.239 Sum_probs=73.1
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| ++||++|+.+.|.+.++.++|.+.++.|+.|++|.. +.+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS- 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH-
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH-
Confidence 4789999999 999999999999999999999765799999998741 15788
Q ss_pred HcCCCC-----CCCEEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 012424 423 QKLQLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~-----~~PTi~lf~~g~~~~~~y~gg---~~~~e~L~~fI~~l 463 (464)
+.|++. ++|+++++..++.....+.|. ..+.++|.+.|+++
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 899998 999999996444323333331 13788999998876
No 203
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.91 E-value=2.7e-09 Score=83.93 Aligned_cols=74 Identities=16% Similarity=0.301 Sum_probs=59.1
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcCC--CCCCCEEEEEeCCCCCeeecCCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQ--LGSFPTILFFPKHSSKPIKYPSER 450 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~---~~l~~~~~~--I~~~PTi~lf~~g~~~~~~y~gg~ 450 (464)
++.|+++||++|+.+.+.|++++..+.+ +.+..+|++.+. .++. +.++ +.++|++ |.+|+ .+ ++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~--i~~~~vdi~~~~~~~~~l~-~~~~~~~~~vP~i--~~~g~--~i---~~- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQ-QKAGKPVETVPQI--FVDQQ--HI---GG- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHH-HHTCCCSCCSCEE--EETTE--EE---ES-
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC--ceEEEEecccChHHHHHHH-HHhCCCCceeCeE--EECCE--EE---EC-
Confidence 6789999999999999999999988764 999999997651 3788 8898 9999998 34665 33 22
Q ss_pred CCHHHHHHHHHH
Q 012424 451 RDVDSLMAFVDA 462 (464)
Q Consensus 451 ~~~e~L~~fI~~ 462 (464)
.++|.+++++
T Consensus 72 --~~~l~~~~~~ 81 (85)
T 1ego_A 72 --YTDFAAWVKE 81 (85)
T ss_dssp --SHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 2578888764
No 204
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.91 E-value=5.6e-10 Score=93.39 Aligned_cols=89 Identities=16% Similarity=0.279 Sum_probs=58.4
Q ss_pred chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHcCCCCCCCEEEE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLGSFPTILF 435 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~----~~l~~~~~~I~~~PTi~l 435 (464)
+.+++++. ++.+++ ||++||++|+.+.|.|+++.. .+.++.||.+.+. .+++ +.|++.++||+
T Consensus 11 ~~~~~~~~----~~~vv~-f~a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~~~~~~~~~l~-~~~~v~~~Pt~-- 77 (116)
T 2e7p_A 11 KKAKELAS----SAPVVV-FSKTYCGYCNRVKQLLTQVGA-----SYKVVELDELSDGSQLQSALA-HWTGRGTVPNV-- 77 (116)
T ss_dssp HHHHHHHT----SSSEEE-EECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEE--
T ss_pred HHHHHHHc----CCCEEE-EECCCChhHHHHHHHHHHcCC-----CeEEEEccCCCChHHHHHHHH-HHhCCCCcCEE--
Confidence 34455543 456666 999999999999999988743 2455555554431 3588 89999999999
Q ss_pred EeCCCCCeeecCCCCC---CHHHHHHHHHHh
Q 012424 436 FPKHSSKPIKYPSERR---DVDSLMAFVDAL 463 (464)
Q Consensus 436 f~~g~~~~~~y~gg~~---~~e~L~~fI~~l 463 (464)
|.+|+. ...+.| .. +.++|.++|+++
T Consensus 78 ~~~g~~-v~~~~~-~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 78 FIGGKQ-IGGCDT-VVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EETTEE-EECHHH-HHHHHHTTCHHHHHHHT
T ss_pred EECCEE-ECChHH-HHHHHhCChHHHHHHHc
Confidence 457762 222222 22 445677777754
No 205
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.91 E-value=2.5e-09 Score=98.28 Aligned_cols=92 Identities=11% Similarity=0.178 Sum_probs=72.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| ++||++|..+.|.|.++.++|++.++.|+.|++|.. +.+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS- 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH-
Confidence 4689999999 999999999999999999999876799999998741 14688
Q ss_pred HcCCCC------CCCEEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 012424 423 QKLQLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~------~~PTi~lf~~g~~~~~~y~gg---~~~~e~L~~fI~~l 463 (464)
+.|++. .+|+++++...+.....+.|. .++.+++.+.|+++
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 899998 799999996544322222221 35789999999876
No 206
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.90 E-value=3.1e-09 Score=99.04 Aligned_cols=44 Identities=20% Similarity=0.117 Sum_probs=41.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 414 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d 414 (464)
+++++||+|||+||++|+.+.|.|+++.++|++.++.|+.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 57899999999999999999999999999998767999999986
No 207
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=98.89 E-value=8.4e-09 Score=97.60 Aligned_cols=181 Identities=14% Similarity=0.146 Sum_probs=103.3
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCc-EEEEcCCh-HHHH-HHHHhcC--C
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDA-VEVQ-ALVRSKG--L 186 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~-i~~~~p~~-~~~~-~~~~~~g--~ 186 (464)
++++|++|||+||+++ +++.+.+.++..+++|.|....+-.++++++++++|++ ++++.-.. ..+. ..+.... .
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~~~~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~~~~l~~~~~~~l~~~~~~v 82 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDSIPV 82 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEECTHHHHTSHHHHHHTTCCC
T ss_pred CCEEEEecCcHHHHHHHHHHHHcCCCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEeChhHHHHhhhhcccccccc
Confidence 3589999999999766 78877777788999999976667789999999999998 87775441 1111 1111111 1
Q ss_pred CC--CCCc-chhhhhhcccc--chH-HHHh--ccCcEEEEeeeccCCcccccCCcee--ecCCCCcCccCCCCCeEEEEe
Q 012424 187 FS--FYED-GHQECCRVRKV--RPL-RRAL--KGLRAWITGQRKDQSPGTRSEIPVV--QVDPVFEGLEGGVGSLVKWNP 256 (464)
Q Consensus 187 ~~--~~~~-~~~~Cc~~~Kv--~Pl-~r~l--~~~~~~itG~R~~ES~~~R~~~~~~--~~d~~~~~~~~~~~~~~k~~P 256 (464)
+. .... ....|...++. .-+ ..+. .+.+.+++|...++..+-+...+.+ ..+.... . +...+..-++|
T Consensus 83 ~~~~~~~~~~~~~~~~~R~~~~~~la~~~A~~~g~~~I~~G~~~~D~~~~~~~r~~~~~~~~~~~~-~-~~~~~~~i~~P 160 (232)
T 2pg3_A 83 PDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIV-L-GIARDIRFETP 160 (232)
T ss_dssp CC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHH-H-HHTSCCEEECT
T ss_pred cccccccCCCCCCeEechHHHHHHHHHHHHHHcCcCEEEEccCccccCCCCCCCHHHHHHHHHHHH-H-hCCCCeEEEEe
Confidence 10 0011 11123222221 111 1222 2667899999988753111110000 0000000 0 00013556899
Q ss_pred CccCcHHHHHHHHHhcCC-Cc--chhhhc--CCcccCccCCCcc
Q 012424 257 VANVKGNDIWNFLRTMDV-PI--NSLHSQ--GYISIGCEPCTRP 295 (464)
Q Consensus 257 I~dWt~~DVw~yi~~~~l-p~--npLy~~--Gy~siGC~~CT~~ 295 (464)
|++|+..||++|.+.+++ |+ ..-+.+ |-...+|-.|+..
T Consensus 161 L~~~~K~ei~~~a~~~gl~~~~~~~t~sC~~~~~~~~CG~C~~C 204 (232)
T 2pg3_A 161 LMWLNKAETWALADYYQQLDTVRYHTLTCYNGIKGDGCGQCAAC 204 (232)
T ss_dssp TTTCCHHHHHHHHHHTTCHHHHHHHCCCCTTSCCTTTTSCSHHH
T ss_pred cCCCCHHHHHHHHHHcCCCcccccccCCCcCCCCCCcCCcCHhH
Confidence 999999999999999999 64 322222 2112678777654
No 208
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.87 E-value=2.6e-09 Score=97.17 Aligned_cols=91 Identities=15% Similarity=0.100 Sum_probs=67.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHHcCCC-------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQKLQL------------- 427 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-------~~---~~l~~~~~~I------------- 427 (464)
.++++||+||++||++|+...|.+.++.+++++.++.|+.|++|. .. .+++ +++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHH-HHcCCCCeeeeeeccCCh
Confidence 578999999999999999999999999999987679999999863 10 2233 33322
Q ss_pred -----------------------CCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 428 -----------------------GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 -----------------------~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
..+|+++++...++....+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECT-TSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCC-CCCHHHHHHHHHHh
Confidence 225888888544433445555 67888888888775
No 209
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=98.86 E-value=6.7e-09 Score=105.38 Aligned_cols=163 Identities=10% Similarity=0.037 Sum_probs=105.4
Q ss_pred CCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCC--------cHHHHHHHHHHHHHhCCcEEEEcCChHHHH----
Q 012424 112 GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRL--------NPETYRFFDEVEKHFGIRIEYMFPDAVEVQ---- 178 (464)
Q Consensus 112 ~~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~--------fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~---- 178 (464)
+.+|+|++|||+||+++ +|+.+.+.++..+|+|++.. .++..+.++++++++|++++++......+.
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~~~~~~~~v~~ 88 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNFEKEYWDRVFE 88 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHH
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcCCcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEeChHHHHHHHHH
Confidence 35699999999999766 88888888899999999854 357789999999999999988754322111
Q ss_pred HHHHhcCCCCCCCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCcccccCCc-eee-cCCC----CcCc-cCCCC
Q 012424 179 ALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIP-VVQ-VDPV----FEGL-EGGVG 249 (464)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~-~~~-~d~~----~~~~-~~~~~ 249 (464)
.++..+.....+ +.-..|....|...+.+... +.+.++||...++.. .+.... .+. .++. +.-. .....
T Consensus 89 ~~l~~y~~G~tp-npc~~C~r~ik~~~l~~~A~~~G~d~IatGH~a~d~~-~~~~~~~l~rg~d~~kdqsyfL~~l~~~~ 166 (376)
T 2hma_A 89 YFLAEYRAGRTP-NPDVMCNKEIKFKAFLDYAITLGADYVATGHYARVAR-DEDGTVHMLRGVDNGKDQTYFLSQLSQEQ 166 (376)
T ss_dssp HHHHHHHTTCCC-CHHHHHHHHTTTTHHHHHHHTTTCSEEECCCSEEEEE-CSSSCEEEEECSSTTTCCGGGGTTCCHHH
T ss_pred HHHHHHhcCCCC-ChHHHHHHHHHHHHHHHHHHhCCCCEEEECcchhhhh-CCCchhhhhhccccccccchhccCCChhh
Confidence 112222110111 12335667778888887776 556899999877631 011111 111 1110 0000 00000
Q ss_pred CeEEEEeCccCcHHHHHHHHHhcCCCc
Q 012424 250 SLVKWNPVANVKGNDIWNFLRTMDVPI 276 (464)
Q Consensus 250 ~~~k~~PI~dWt~~DVw~yi~~~~lp~ 276 (464)
....+.||.+++..||.+|.++++||+
T Consensus 167 l~~~i~PL~~~~K~eVr~~A~~~gl~~ 193 (376)
T 2hma_A 167 LQKTMFPLGHLEKPEVRRLAEEAGLST 193 (376)
T ss_dssp HTTEECTTTTCCHHHHHHHHHHTTCTT
T ss_pred cCcEEecCcCCCHHHHHHHHHHcCCCc
Confidence 134689999999999999999999985
No 210
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.83 E-value=6.1e-09 Score=96.17 Aligned_cols=92 Identities=13% Similarity=0.216 Sum_probs=72.7
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| ++||++|..+.|.+.++.++|++.++.|+.|++|.. +.+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM- 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH-
Confidence 4689999999 999999999999999999999876799999998741 14678
Q ss_pred HcCCCC------CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 012424 423 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~------~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l 463 (464)
+.|++. .+|+++++...+.....+.| ..++.++|.+.|+++
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 789998 99999999544432222222 135789999998876
No 211
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.81 E-value=7e-09 Score=97.38 Aligned_cols=92 Identities=11% Similarity=0.186 Sum_probs=72.3
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| ++||++|+.+.|.|.++.++|.+.++.|+.|++|.. +.+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~- 133 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQIS- 133 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHH-
Confidence 4689999999 999999999999999999999765799999988641 14688
Q ss_pred HcCCCC------CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 012424 423 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~------~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l 463 (464)
+.|++. .+|++++++..+.....+.| ..++.++|.+.|++|
T Consensus 134 ~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 134 RDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 899998 99999999544432222222 136789999998876
No 212
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.80 E-value=2e-08 Score=88.88 Aligned_cols=92 Identities=9% Similarity=0.081 Sum_probs=70.7
Q ss_pred CCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHcCCCCC
Q 012424 371 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGS 429 (464)
Q Consensus 371 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--------------------~~~l~~~~~~I~~ 429 (464)
.++++||+||+ +||++|....|.+.++.++|++.++.|+.|++|.. +.+++ +.|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 112 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALC-RAFDVIK 112 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHH-HHTTCEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHH-HHhCCcc
Confidence 46799999998 99999999999999999999876799999988732 13677 7888877
Q ss_pred ------------CCEEEEEeCCCCCeeecCCC--CCCHHHHHHHHHHh
Q 012424 430 ------------FPTILFFPKHSSKPIKYPSE--RRDVDSLMAFVDAL 463 (464)
Q Consensus 430 ------------~PTi~lf~~g~~~~~~y~gg--~~~~e~L~~fI~~l 463 (464)
+|+++++...+.....+.+. ....+++.+.|+++
T Consensus 113 ~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 113 EKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 99999996544333333331 24567888888776
No 213
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=98.80 E-value=1.7e-08 Score=97.72 Aligned_cols=156 Identities=12% Similarity=0.105 Sum_probs=98.0
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHcC-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 012424 101 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTG-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 177 (464)
Q Consensus 101 ~eil~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~~~-~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~ 177 (464)
.+.|+..+...+ .+++|++|||+||+++ +|+.+.. .++..+++|++...+++.++++++++.+|++++++.-.. .+
T Consensus 13 ~~~l~~~v~~~~~~~vvv~lSGGiDSsv~~~l~~~~~~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~i~~-~~ 91 (268)
T 1xng_A 13 CDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAP-YD 91 (268)
T ss_dssp HHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHH-HH
T ss_pred HHHHHHHHHHhCCCCEEEEccCcHHHHHHHHHHHHhCCCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEeChH-HH
Confidence 344454444433 5699999999999766 7777754 678999999998889999999999999999987764322 12
Q ss_pred HHHHHhcCCCCCCCcchhhhh--hccccchHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCCcCccCCCCCeEE
Q 012424 178 QALVRSKGLFSFYEDGHQECC--RVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVK 253 (464)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~Cc--~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k 253 (464)
..+...... . .+...|. ...+...+.+..+ +..++.||. .+|.. +. .. ..+ + .+...
T Consensus 92 ~~~~~~~~~--~--~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tg~-~~E~~--~G-y~-----t~~-----g-d~~~~ 152 (268)
T 1xng_A 92 AIFSSHFKD--A--SLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSN-KSERM--LG-YG-----TLF-----G-DLACA 152 (268)
T ss_dssp HHHHHHCTT--C--CHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCC-HHHHH--HT-CS-----CTT-----T-TTCCS
T ss_pred HHHHHHhhh--c--CCchHHHHHHHHHHHHHHHHHHHCCCEEEECCc-HHHHh--cC-cc-----ccc-----C-CCCee
Confidence 223322211 0 1222332 2233333444333 445666664 34532 11 10 011 0 12345
Q ss_pred EEeCccCcHHHHHHHHHhcCCCc
Q 012424 254 WNPVANVKGNDIWNFLRTMDVPI 276 (464)
Q Consensus 254 ~~PI~dWt~~DVw~yi~~~~lp~ 276 (464)
++||.+|+..||+.|.+..|+|.
T Consensus 153 i~PL~~l~K~ev~~la~~~gip~ 175 (268)
T 1xng_A 153 INPIGELFKTEVYELARRLNIPK 175 (268)
T ss_dssp EETTTTSCHHHHHHHHHHTTCCH
T ss_pred EEecCCCCHHHHHHHHHHcCCcH
Confidence 89999999999999999999984
No 214
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.80 E-value=2.8e-08 Score=88.38 Aligned_cols=90 Identities=14% Similarity=0.184 Sum_probs=68.9
Q ss_pred CCCcEEEEEecCC-ChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012424 371 RQEPWLVVLYAPW-CQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fya~w-C~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~~~~~I 427 (464)
.++++||+||++| |++|+.+.|.+.++.+++ . ++.|+.|+.|.. +.+++ +.|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG-EAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH-HHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH-HHhCC
Confidence 4689999999999 999999999999999999 4 699999988741 14677 78998
Q ss_pred CC------CCEEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 012424 428 GS------FPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~------~PTi~lf~~g~~~~~~y~g----g~~~~e~L~~fI~~l 463 (464)
.. .|+++++...+.....+.| ...+.+++.+.|++|
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 76 4999999654433333322 123568888888875
No 215
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.79 E-value=6.6e-09 Score=95.01 Aligned_cols=92 Identities=16% Similarity=0.226 Sum_probs=71.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| ++||++|..+.|.+.++.++|.+.++.|+.|++|.. +.+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA- 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH-
Confidence 4689999999 999999999999999999999755799999988731 14688
Q ss_pred HcCCCC-----CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 012424 423 QKLQLG-----SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~-----~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l 463 (464)
+.|++. .+|+++++...+.....+.| ..++.++|.+.|+++
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 899999 89999999544432222223 124688899888875
No 216
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.76 E-value=1.1e-08 Score=95.45 Aligned_cols=92 Identities=14% Similarity=0.195 Sum_probs=71.9
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| ++||++|+.+.|.|.++.++|++.++.|+.|++|.. +.+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS- 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH-
Confidence 4689999999 999999999999999999999755799999987641 14688
Q ss_pred HcCCCC-----CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 012424 423 QKLQLG-----SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~-----~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l 463 (464)
+.|++. .+|+++++...+.....+.+ ..++.++|.+.|+++
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 889998 89999999654432222222 125789999998876
No 217
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.76 E-value=1.8e-08 Score=94.72 Aligned_cols=92 Identities=13% Similarity=0.231 Sum_probs=71.8
Q ss_pred CCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+||+ +||++|....|.+.++.++|++.++.|+.|++|.. +..++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS- 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH-
Confidence 47899999997 99999999999999999999876799999998742 13577
Q ss_pred HcCCCC------CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 012424 423 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~------~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l 463 (464)
+.|++. .+|+++++...+.....+.+ .....+++.+.|+++
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 789998 89999999654432233222 124678888888765
No 218
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.75 E-value=1.1e-07 Score=89.42 Aligned_cols=106 Identities=11% Similarity=0.132 Sum_probs=86.5
Q ss_pred CCeeecCcchHHHHHhhcCCCC-cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC--CcHHHHHHcCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQKEYAKQKLQLG 428 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k-~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~--~~~~l~~~~~~I~ 428 (464)
+.|.+++.+++..+.. .+. .+++.|+.+||..|..+.+.|.++|+.+++ ++.|+.+|++. + ..++ +.|++.
T Consensus 113 plv~e~t~~n~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~-~i~F~~vd~~~~~~-~~~l-~~fgl~ 186 (227)
T 4f9z_D 113 HMVTEYNPVTVIGLFN---SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQG-KILFILVDSGMKEN-GKVI-SFFKLK 186 (227)
T ss_dssp CSEEECCHHHHHHHHH---SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTT-TCEEEEEETTSGGG-HHHH-HHTTCC
T ss_pred CceeecCcccHHHHhc---cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhC-CEEEEEeCCccHhH-HHHH-HHcCCC
Confidence 3689999999999876 443 455667789999999999999999999998 79999999974 4 6788 899998
Q ss_pred --CCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 --SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 --~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.+|++.++..+..+...+..+..+.++|.+|++.+
T Consensus 187 ~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 187 ESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp GGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 89999999855432344443468999999999875
No 219
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.74 E-value=2.2e-08 Score=89.24 Aligned_cols=92 Identities=17% Similarity=0.313 Sum_probs=66.8
Q ss_pred CCCcEEEEEecCCCh-hHHhhHHHHHHHHHHhcCC--CeEEEEEEcCCC--c-------------------------HHH
Q 012424 371 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAGN--GVKVGKFRADGD--Q-------------------------KEY 420 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~-~C~~~~p~~~~la~~~~~~--~v~~~~Id~d~~--~-------------------------~~l 420 (464)
.++++||+||++||+ +|....|.+.++.+.+++. ++.|+.|++|.. . .++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 578999999999999 9999999999999998764 499999998731 0 111
Q ss_pred HHHc----------------CCCCCCCEEEEEeCCCCCeeecCCCC-CCHHHHHHHHHHh
Q 012424 421 AKQK----------------LQLGSFPTILFFPKHSSKPIKYPSER-RDVDSLMAFVDAL 463 (464)
Q Consensus 421 ~~~~----------------~~I~~~PTi~lf~~g~~~~~~y~gg~-~~~e~L~~fI~~l 463 (464)
. +. |++...|+++++...+.....+.|.. .+.++|.+.|+++
T Consensus 112 ~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 I-EEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp H-HHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHH
T ss_pred H-HHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHH
Confidence 1 11 34567898888865544344444522 2589999999876
No 220
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=98.74 E-value=2.6e-08 Score=95.75 Aligned_cols=149 Identities=17% Similarity=0.193 Sum_probs=92.8
Q ss_pred CCcEEEEechhHHHHHH-HHHHHc-C-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCC
Q 012424 112 GNDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFS 188 (464)
Q Consensus 112 ~~~i~vafSGGKDS~ll-~L~~~~-~-~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~ 188 (464)
..+++|++|||.||+++ +|+.+. + .++..+++|+|.. +..++++++++++|++++++.-.. .+..+.......
T Consensus 22 ~~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~--~~~~~a~~~a~~lgi~~~~i~i~~-~~~~~~~~l~~~- 97 (257)
T 2e18_A 22 NNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFEN--KDVEDAKLVAEKLGIGYKVINIKP-IVDSFVENLELN- 97 (257)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCS--THHHHHHHHHHHHTCEEEECCCHH-HHHHHHHHHCSC-
T ss_pred CCcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCc--hHHHHHHHHHHHhCCCEEEEEChH-HHHHHHHHhccc-
Confidence 35699999999999766 777765 3 5789999999964 789999999999999887764322 122222221110
Q ss_pred CCCcchhhh--hhccccchHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCCcCccCCCCCeEEEEeCccCcHHH
Q 012424 189 FYEDGHQEC--CRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGND 264 (464)
Q Consensus 189 ~~~~~~~~C--c~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~D 264 (464)
..+...| |...+..-+.+..+ +..++.||...+.. +.-.. .+ + .+...++||.+|+..|
T Consensus 98 --~~~~~~~n~~ar~r~~~l~~~A~~~g~~vl~tg~~~e~~---~Gy~t------~~-----g-~~~~~i~Pl~~l~K~e 160 (257)
T 2e18_A 98 --LDRKGLGNIMSRTRMIMLYAHANSLGRIVLGTSNRSEFL---TGYFT------KW-----G-DGASDYAPIINLYKTE 160 (257)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCHHHHH---HTCSC------TT-----S-TTCSSBCTTTTSCHHH
T ss_pred --cccchhHHHHHHHHHHHHHHHHHHcCCEEEEcCchhHHh---cCCee------cc-----C-CCccCEeecCCCcHHH
Confidence 0112223 11223333333333 45577777654332 11100 01 0 1233589999999999
Q ss_pred HHHHHHhcCCCcchhhh
Q 012424 265 IWNFLRTMDVPINSLHS 281 (464)
Q Consensus 265 Vw~yi~~~~lp~npLy~ 281 (464)
|+.|.+.+|+|++-+..
T Consensus 161 v~~la~~~gip~~i~~~ 177 (257)
T 2e18_A 161 VWEIAKRIGVPERIVKK 177 (257)
T ss_dssp HHHHHHHHTCCHHHHHS
T ss_pred HHHHHHHcCCCHHHhCC
Confidence 99999999999765543
No 221
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=98.70 E-value=3.1e-08 Score=94.84 Aligned_cols=156 Identities=9% Similarity=0.080 Sum_probs=96.6
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 012424 101 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 177 (464)
Q Consensus 101 ~eil~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~~-~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~ 177 (464)
...|+..+.+.+ .+++|++|||.||+++ +|+.+. +.++..++++.+...++..+.++++++.+|++++++.-. ..+
T Consensus 14 ~~~l~d~v~~~g~~~vvv~lSGGiDSsv~a~l~~~~~g~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~i~-~~~ 92 (249)
T 3p52_A 14 CDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCKRALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQ-SIL 92 (249)
T ss_dssp HHHHHHHHHTSSCSEEEEECCSSHHHHHHHHHHHHHHTTSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECCCH-HHH
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEECc-HHH
Confidence 345555666655 5699999999999877 777775 888999999999877888999999999999998765322 222
Q ss_pred HHHHHhcCCCCCCCcchhhh--hhccccchHHHHhccCcEEEE-eeeccCCcccccCCceeecCCCCcCccCCCCCeEEE
Q 012424 178 QALVRSKGLFSFYEDGHQEC--CRVRKVRPLRRALKGLRAWIT-GQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 254 (464)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~C--c~~~Kv~Pl~r~l~~~~~~it-G~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~ 254 (464)
..+... .. ...+...| |...+..-+....+...+.+. +-.++|.. ........| +..-+
T Consensus 93 ~~~~~~--~~--~~~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tgn~se~~---~g~~t~~gd-----------~~~~i 154 (249)
T 3p52_A 93 DAFIKQ--SE--NTTLVSLGNFAARIRMSLLYDYSALKNSLVIGTSNKSELL---LGYGTIYGD-----------LACAF 154 (249)
T ss_dssp HHHHTT--CS--CCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHH---HTCSCTTTT-----------TCCSE
T ss_pred HHHHHh--cc--ccCCccHhHHHHHHHHHHHHHHHHHCCCeEEeCCCHHHHH---ccchhhhcc-----------ccCcc
Confidence 222221 11 11222334 343444444444443433332 22233321 010000001 11248
Q ss_pred EeCccCcHHHHHHHHHhcCCC
Q 012424 255 NPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~~lp 275 (464)
+||.+++..||+++.+..|+|
T Consensus 155 ~PL~~l~K~eV~~la~~~gip 175 (249)
T 3p52_A 155 NPIGSLYKSEIYALAKYLNLH 175 (249)
T ss_dssp ETTTTSCHHHHHHHHHHTTCC
T ss_pred ccccCCcHHHHHHHHHHcCCc
Confidence 999999999999999999987
No 222
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=98.69 E-value=2.7e-08 Score=105.34 Aligned_cols=167 Identities=15% Similarity=0.195 Sum_probs=97.6
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcH-HHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNP-ETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 189 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~-~~~i~vv~~DTg~~fp-eT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 189 (464)
++++|++|||+||+++ +|+.+. +.++..+|+|+|.... |..+.++.+++++|++++++.-... +.. ...|.. -
T Consensus 231 ~kvlvalSGGvDSsvla~ll~~~~G~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-~~~--~l~g~~-~ 306 (527)
T 3tqi_A 231 EQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLVDTGLLRLNEVDEVLNVFQKHLGAKVICVDAKDR-FMK--ALKGIS-D 306 (527)
T ss_dssp SCEEEECTTTHHHHHHHHHHHHHHGGGEEEEEECCSCSCTTHHHHHHHHHTTSSCCEEEEECCHHH-HHS--SSSSCC-C
T ss_pred CeEEEEEecCcCHHHHHHHHHHHhCCeEEEEEeccCCCChhHHHHHHHHHHHHcCCcEEEEeChHH-HHH--hhcCCC-C
Confidence 5799999999999776 777775 8889999999998754 5555556699999999988743211 110 111211 0
Q ss_pred CCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCcccccCCc----eeecCCCCcCccCCCCCeEEEEeCccCcHH
Q 012424 190 YEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIP----VVQVDPVFEGLEGGVGSLVKWNPVANVKGN 263 (464)
Q Consensus 190 ~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~----~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~ 263 (464)
+......|+.. ..+-+.+..+ +.+.+++|...++-..++...+ .+.......+.. ...++.-+.||.+++.+
T Consensus 307 ~~~~r~~~~~~-~~~~~~~~A~~~g~~~la~Gh~~dD~~Et~~~~~g~~~~ik~~~~l~gl~-~~~~~~iirPL~~l~K~ 384 (527)
T 3tqi_A 307 PEEKRKIAGEQ-FIRVFEEQAKKLNVKWLGQGTIYPDVIESAKTKTGKGHIIKTHHNVGGLP-LNMELKLIEPLRELFKD 384 (527)
T ss_dssp HHHHHHHHHHH-HHHHHHHTTTTTTCCEEECCCCHHHHHCC---------------------------CEECTTTTCCHH
T ss_pred hhhhhhhhHHH-HHHHHHHHHHHcCCCEEEccccCCccccccccCCChhheeeeecccccCc-ccccCccccchhcCCHH
Confidence 11112233322 2333444333 4568999996555321110000 000000000000 00123368999999999
Q ss_pred HHHHHHHhcCCCcchhhhcCCc
Q 012424 264 DIWNFLRTMDVPINSLHSQGYI 285 (464)
Q Consensus 264 DVw~yi~~~~lp~npLy~~Gy~ 285 (464)
||.+|.+++|+|+.-.++.-|.
T Consensus 385 EIr~~a~~lGlp~~~v~~~P~p 406 (527)
T 3tqi_A 385 EVRKLGLELGLPADLIYRHPFP 406 (527)
T ss_dssp HHHHHHHHHTCCHHHHTCCCCC
T ss_pred HHHHHHHHcCCChhhhccCCCC
Confidence 9999999999999888877555
No 223
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=98.68 E-value=3.4e-08 Score=100.27 Aligned_cols=161 Identities=11% Similarity=0.074 Sum_probs=102.2
Q ss_pred CCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCC--------cHHHHHHHHHHHHHhCCcEEEEcCChHHH----H
Q 012424 112 GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRL--------NPETYRFFDEVEKHFGIRIEYMFPDAVEV----Q 178 (464)
Q Consensus 112 ~~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~--------fpeT~~~~~~~~~~~gl~i~~~~p~~~~~----~ 178 (464)
+.+|+|++|||+||+++ +|+.+.+.++..+|+|++.. .++..+.++++++++|++++++.-...-+ .
T Consensus 17 ~~kVvVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~~~~f~~~v~~ 96 (380)
T 2der_A 17 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFE 96 (380)
T ss_dssp CCEEEEECCSCSTTHHHHHHHHTTCCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHH
T ss_pred CCEEEEEEEChHHHHHHHHHHHHcCCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeCcHHHHHHHHH
Confidence 35699999999998766 88888888899999998754 35678999999999999998875432111 1
Q ss_pred HHHHhc--CCCCCCCcchhhhhhccccchHHHHhc---cCcEEEEeeeccCCcc-cccCCceeecCC----CCcCccCCC
Q 012424 179 ALVRSK--GLFSFYEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSPG-TRSEIPVVQVDP----VFEGLEGGV 248 (464)
Q Consensus 179 ~~~~~~--g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~---~~~~~itG~R~~ES~~-~R~~~~~~~~d~----~~~~~~~~~ 248 (464)
..+.++ |.. + +.--.|....|...+.+... +.+.++||...++... .|..+. ...+. .|.-..-..
T Consensus 97 ~~~~ey~~G~t--p-npc~~Cnr~ik~~~l~~~A~~~~Gad~IatGH~a~d~~~~~~~~l~-rg~~~~kdqsy~L~~l~~ 172 (380)
T 2der_A 97 LFLAEYKAGRT--P-NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLL-RGLDSNKDQSYFLYTLSH 172 (380)
T ss_dssp HHHHHHHTTCC--C-CHHHHHHHHTTTTHHHHHHHHTTCCSEEECCCSCEEEEETTEEEEE-CCSSTTTCCGGGGSSCCH
T ss_pred HHHHHHHcCCC--C-ChhHHHHHHHHHHHHHHHHHhhcCCCEEEEccccccccccchHHHh-cccccccccceeecCCCh
Confidence 112222 221 1 12234556568777776654 5568999987775310 111110 00111 000000000
Q ss_pred -CCeEEEEeCccCcHHHHHHHHHhcCCCc
Q 012424 249 -GSLVKWNPVANVKGNDIWNFLRTMDVPI 276 (464)
Q Consensus 249 -~~~~k~~PI~dWt~~DVw~yi~~~~lp~ 276 (464)
.....+.||.+++..||.+|.++++||+
T Consensus 173 ~~l~~~i~PL~~~~K~eVr~~A~~~Gl~~ 201 (380)
T 2der_A 173 EQIAQSLFPVGELEKPQVRKIAEDLGLVT 201 (380)
T ss_dssp HHHHHEECCGGGSCHHHHHHHHHHTTCC-
T ss_pred hhcceeEccCCCCCHHHHHHHHHHcCCCC
Confidence 0135799999999999999999999985
No 224
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=98.67 E-value=7.7e-08 Score=92.09 Aligned_cols=158 Identities=15% Similarity=0.094 Sum_probs=94.9
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHH
Q 012424 101 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQ 178 (464)
Q Consensus 101 ~eil~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~ 178 (464)
.+.|+..+...+ .+++|++|||.||+++ +|+.+...+...++++++...++..++++++++++|++++++.-. ..+.
T Consensus 17 ~~~l~~~v~~~~~~~vvv~lSGGiDSsv~a~l~~~~~~~~~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~~~-~~~~ 95 (249)
T 3fiu_A 17 VNWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVKTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTISIQ-PAYE 95 (249)
T ss_dssp HHHHHHHHHTTTCSEEEEECCSSHHHHHHHHHHHHTTSCEEEEECCCTTSCHHHHHHHHHHHHHHTCEEEECCCH-HHHH
T ss_pred HHHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHHHhCCCCEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEECh-HHHH
Confidence 344555555444 5699999999999877 788776665558999998778899999999999999988776322 2233
Q ss_pred HHHHhcCCCCCC-Ccchhhhh--h---ccccchHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCCcCccCCCCC
Q 012424 179 ALVRSKGLFSFY-EDGHQECC--R---VRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGS 250 (464)
Q Consensus 179 ~~~~~~g~~~~~-~~~~~~Cc--~---~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~ 250 (464)
.+...-. +.+. ......|| . ..+..-+....+ +..++.|| .++|. +........| +
T Consensus 96 ~~~~~~~-~~~~~~~~~~~~~~~Ni~~r~R~~~l~~~A~~~g~~vl~TG-n~sE~---~~G~~t~~gd-----------~ 159 (249)
T 3fiu_A 96 AFLASTQ-SFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTD-NACEW---YMGYFTKFGD-----------G 159 (249)
T ss_dssp HHHHHTG-GGC------CHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCC-CHHHH---HHTCSCTTTT-----------T
T ss_pred HHHHHHH-hhccCCCCcChhHHHHHHHHHHHHHHHHHHHHcCCEEEECC-CHHHH---hcCchhccCC-----------C
Confidence 3322110 0000 01122334 2 223333333333 33455566 44443 2221111111 1
Q ss_pred eEEEEeCccCcHHHHHHHHHhcCCC
Q 012424 251 LVKWNPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 251 ~~k~~PI~dWt~~DVw~yi~~~~lp 275 (464)
.--++||.+++..||+++.+..|+|
T Consensus 160 ~~~i~PL~~l~K~eVr~lA~~lglp 184 (249)
T 3fiu_A 160 AADILPLVNLKKSQVFELGKYLDVP 184 (249)
T ss_dssp CCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred CcceeecccCcHHHHHHHHHHcCCc
Confidence 2258999999999999999999987
No 225
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.64 E-value=7.9e-08 Score=86.25 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=64.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 414 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d------------------------------------ 414 (464)
..+++|+.|+.+|||+|+.+.|.+.++.+++++ +.|...+..
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 467899999999999999999999999988754 666665532
Q ss_pred ---------------------------------CCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 012424 415 ---------------------------------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 461 (464)
Q Consensus 415 ---------------------------------~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~ 461 (464)
.+ ..++ ++++|.++||+++ +|+ .+.| ..+.+.|.+.|+
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~-~~~a-~~~gv~gtPt~~i--~g~----~~~G-~~~~~~l~~~i~ 169 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQS-MALA-QKLGFNGTPSFVV--EDA----LVPG-FVEQSQLQDAVD 169 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHH-HHHH-HHHTCCSSSEEEE--TTE----EECS-CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHH-HHHH-HHcCCccCCEEEE--CCE----EeeC-CCCHHHHHHHHH
Confidence 12 3466 7899999999987 553 3345 689999999998
Q ss_pred Hh
Q 012424 462 AL 463 (464)
Q Consensus 462 ~l 463 (464)
++
T Consensus 170 ~~ 171 (175)
T 3gyk_A 170 RA 171 (175)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 226
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.64 E-value=9.5e-08 Score=86.44 Aligned_cols=107 Identities=7% Similarity=-0.044 Sum_probs=74.7
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------- 416 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--------------- 416 (464)
.+..++++.+.---. .++++||+|| +.||++|....|.|.++.++|++.++.|+.|.+|..
T Consensus 35 ~l~~~~G~~v~l~d~---~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~ 111 (179)
T 3ixr_A 35 PLMLSGSTCKTLSDY---TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFP 111 (179)
T ss_dssp CEEEGGGEEECGGGG---TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSC
T ss_pred eEECCCCCEEeHHHH---CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceE
Confidence 455555544322111 5678999998 999999999999999999999877899999987642
Q ss_pred -----cHHHHHHcCCCCC------------CCEEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 012424 417 -----QKEYAKQKLQLGS------------FPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 463 (464)
Q Consensus 417 -----~~~l~~~~~~I~~------------~PTi~lf~~g~~~~~~y~g--g~~~~e~L~~fI~~l 463 (464)
+.+++ +.|++.. .|+++++...++....+.+ ...+.+++.+.|+++
T Consensus 112 ~l~D~~~~~~-~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 112 LVSDSDAILC-KAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EEECTTCHHH-HHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred EEECCchHHH-HHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 13577 7888853 6889999644432323332 134567888888765
No 227
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.63 E-value=4.1e-08 Score=91.85 Aligned_cols=81 Identities=12% Similarity=0.298 Sum_probs=61.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 414 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d------------------------------------ 414 (464)
.++++|+.||++|||+|+.+.|.++++.+. ++.|..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 160 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP 160 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCCh
Confidence 467899999999999999999999998752 3665544321
Q ss_pred --------CCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 415 --------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 415 --------~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.+ .+++ ++|+|.++||+ +|.+|. . +.| ..+.++|.++|+++
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gtPt~-v~~dG~--~--~~G-~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 161 ASCDVDIADH-YALG-VQLGVSGTPAV-VLSNGT--L--VPG-YQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCSCCHHHH-HHHH-HHHTCCSSSEE-ECTTSC--E--EES-CCCHHHHHHHHHHH
T ss_pred hHHHHHHHHH-HHHH-HHcCCCccCEE-EEcCCe--E--ecC-CCCHHHHHHHHHHh
Confidence 12 5677 89999999999 555664 2 334 67899999998764
No 228
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.63 E-value=1e-07 Score=87.78 Aligned_cols=45 Identities=9% Similarity=-0.031 Sum_probs=39.0
Q ss_pred CCCcEEEEEecCCChh-HHhhHHHHHHHHHHhcC---CCeEEEEEEcCC
Q 012424 371 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG---NGVKVGKFRADG 415 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~-C~~~~p~~~~la~~~~~---~~v~~~~Id~d~ 415 (464)
.++++||+||++||++ |..+.|.+.++.+++.. .++.|+.|++|.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 4789999999999997 99999999998887752 369999998873
No 229
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.62 E-value=3.9e-08 Score=88.56 Aligned_cols=87 Identities=13% Similarity=0.174 Sum_probs=62.7
Q ss_pred CCCcEEEEEecCC-ChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------cHHHHHHcCCCC
Q 012424 371 RQEPWLVVLYAPW-CQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLG 428 (464)
Q Consensus 371 ~~k~vlV~Fya~w-C~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------~~~l~~~~~~I~ 428 (464)
.++++||+||++| |++|+.+.|.|.++.++ . ++.|+.|+.|.. +.+++ +.|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFG-EDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHH-HHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHH-HHhCCc
Confidence 4789999999999 99999999999999988 3 699999988721 14678 889998
Q ss_pred CC---------CEEEEEeCCCCCeeecCC-C---CCCHHHHHHHHH
Q 012424 429 SF---------PTILFFPKHSSKPIKYPS-E---RRDVDSLMAFVD 461 (464)
Q Consensus 429 ~~---------PTi~lf~~g~~~~~~y~g-g---~~~~e~L~~fI~ 461 (464)
.. |+++++...++....+.| + ..+.+++++.+.
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred ccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 77 888888644433333322 1 224555555443
No 230
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.61 E-value=1.3e-07 Score=88.41 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=39.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 414 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d 414 (464)
+++++||+|||+||++|+ ..|.|+++.++|++.++.|+.|+++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 579999999999999999 8999999999998767999999876
No 231
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.61 E-value=1.8e-07 Score=82.57 Aligned_cols=66 Identities=14% Similarity=0.148 Sum_probs=53.3
Q ss_pred CCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHcCCCCCC
Q 012424 372 QEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGSF 430 (464)
Q Consensus 372 ~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--------------------~~~l~~~~~~I~~~ 430 (464)
++++||+|| ++||++|....|.|.++.++|++.+ .|+.|++|.. +.+++ +.|++...
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~ 112 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFI-GLLGAKKT 112 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHH-HHHTCBSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHH-HHhCCccc
Confidence 347889987 9999999999999999999998766 8888877531 14677 78999999
Q ss_pred C-------EEEEEeCCC
Q 012424 431 P-------TILFFPKHS 440 (464)
Q Consensus 431 P-------Ti~lf~~g~ 440 (464)
| ++++ ++|+
T Consensus 113 p~~g~~~~~~li-~~G~ 128 (159)
T 2a4v_A 113 PLSGSIRSHFIF-VDGK 128 (159)
T ss_dssp SSSCBCCEEEEE-ETTE
T ss_pred ccCCccceEEEE-cCCE
Confidence 8 5555 7776
No 232
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.58 E-value=9.3e-08 Score=89.10 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=62.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 414 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d------------------------------------ 414 (464)
..+.+|+.|+++|||+|+.+.|.++++.+. ++.|..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~ 160 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE 160 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence 467899999999999999999999997652 3555544321
Q ss_pred --------CCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHhC
Q 012424 415 --------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 464 (464)
Q Consensus 415 --------~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l~ 464 (464)
.+ .+++ ++++|+++||+++ .+|+ .+.| ..+.++|.++|++.+
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gTPt~vi-~nG~----~~~G-~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 161 VKTPNIVKKH-YELG-IQFGVRGTPSIVT-STGE----LIGG-YLKPADLLRALEETA 210 (211)
T ss_dssp CCCSSHHHHH-HHHH-HHHTCCSSCEEEC-TTSC----CCCS-CCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHH-HHHH-HHcCCCcCCEEEE-eCCE----EecC-CCCHHHHHHHHHhcc
Confidence 12 4677 8999999999987 6665 2345 689999999998753
No 233
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.57 E-value=3.1e-08 Score=87.76 Aligned_cols=92 Identities=16% Similarity=0.275 Sum_probs=62.7
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc--------------------HHHHHHcCCCC-
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--------------------KEYAKQKLQLG- 428 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~--------------------~~l~~~~~~I~- 428 (464)
.++++||+|| ++||++|....|.+.++.+++.+.++.++.|+.|..+ .+++ +.|+|.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~-~~ygv~~ 107 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVV-KKYNVAW 107 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH-HHTTCEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHH-HHcCCcc
Confidence 5789999999 9999999999999999999988778999999876431 3566 677763
Q ss_pred ----------CCCEEEEEeCCCCCeeec----CCCCCCHHHHHHHHHHh
Q 012424 429 ----------SFPTILFFPKHSSKPIKY----PSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ----------~~PTi~lf~~g~~~~~~y----~gg~~~~e~L~~fI~~l 463 (464)
..|+++++...++....+ ..+..+.+++.+.|++|
T Consensus 108 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 108 EFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 357888886444322221 12356889999999887
No 234
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.56 E-value=6.9e-08 Score=75.14 Aligned_cols=71 Identities=14% Similarity=0.184 Sum_probs=53.4
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH--HcCCCCCCCEEEEEeCCCCCeeecCCCCCCH
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK--QKLQLGSFPTILFFPKHSSKPIKYPSERRDV 453 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~--~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~ 453 (464)
++.|+++||++|+.+.+.++++ ++.|..+|++.+ +++.. .++++.++|++ |.+|+ .+ .| .+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~~~-~~~~~~~~~~g~~~vP~~--~~~g~--~~--~g--~~~ 66 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------GFDFEMINVDRV-PEAAEALRAQGFRQLPVV--IAGDL--SW--SG--FRP 66 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHHHHHHHTTCCSSCEE--EETTE--EE--ES--CCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHHHhCCCccCEE--EECCE--EE--ec--CCH
Confidence 6789999999999999998863 478889999987 55541 25899999998 34665 22 22 577
Q ss_pred HHHHHHHHH
Q 012424 454 DSLMAFVDA 462 (464)
Q Consensus 454 e~L~~fI~~ 462 (464)
++|.++|++
T Consensus 67 ~~l~~~l~~ 75 (81)
T 1h75_A 67 DMINRLHPA 75 (81)
T ss_dssp HHHGGGSCC
T ss_pred HHHHHHHhc
Confidence 888877754
No 235
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.53 E-value=2.2e-07 Score=98.42 Aligned_cols=166 Identities=14% Similarity=0.160 Sum_probs=97.1
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcHHHHHHH-HHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFF-DEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 189 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~-~~~i~vv~~DTg~~fpeT~~~~-~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 189 (464)
.++++++|||.||+++ +|+.+. +.++..+|+|+|.......+.+ +.+++++|++++++.-.. .+... ..+.. -
T Consensus 228 ~~vvvalSGGvDSsv~a~ll~~a~G~~v~av~v~~g~~~~~e~~~~~~~la~~lgi~~~~v~~~~-~f~~~--l~~~~-~ 303 (525)
T 1gpm_A 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAED-RFLSA--LAGEN-D 303 (525)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEECHH-HHHHH--HTTCC-C
T ss_pred cceEEEecCCCCHHHHHHHHHHHhCCCEEEEEEeCCCCCchHHHHHHHHHHHHhCCcEEEEeccH-HHHHh--hcCCC-C
Confidence 5799999999999766 777775 7789999999997654445555 447889999998874332 12111 12321 1
Q ss_pred CCcchhhhhhccccchHHHHhc---cCcEEEEeeeccCCccc-c----cCCceeecCCCCcCccCCCCCeEEEEeCccCc
Q 012424 190 YEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSPGT-R----SEIPVVQVDPVFEGLEGGVGSLVKWNPVANVK 261 (464)
Q Consensus 190 ~~~~~~~Cc~~~Kv~Pl~r~l~---~~~~~itG~R~~ES~~~-R----~~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt 261 (464)
++.....|+.. ..+-+.+..+ +.+.+++|.-.++-..+ + ..-....... ..+.. ......-+.||.+++
T Consensus 304 pe~~~~~~~~~-~~~~l~~~A~~~~g~~~l~~Gt~~~D~~E~~~~~~~~s~~iks~~~-l~gl~-~~~~~~~i~PL~~l~ 380 (525)
T 1gpm_A 304 PEAKRKIIGRV-FVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHN-VGGLP-KEMKMGLVEPLKELF 380 (525)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHSSSEEEEECCCCHHHHHHTTC------------------------CCEEECTTTTCC
T ss_pred hHHhhhhhhHH-HHHHHHHHHHhcCCCCEEEeCCCCcchhhhcCcccccccccccccc-ccccc-cccCCcEEehhhcCC
Confidence 11111233333 2344555444 44688999843321101 1 1000000000 00000 001235689999999
Q ss_pred HHHHHHHHHhcCCCcchhhhcCCc
Q 012424 262 GNDIWNFLRTMDVPINSLHSQGYI 285 (464)
Q Consensus 262 ~~DVw~yi~~~~lp~npLy~~Gy~ 285 (464)
..||++|.++.|+|++.++++-|.
T Consensus 381 K~EVr~la~~lglp~~i~~~~P~~ 404 (525)
T 1gpm_A 381 KDEVRKIGLELGLPYDMLYRHPFP 404 (525)
T ss_dssp HHHHHHHHHHTTCCHHHHTSCCCC
T ss_pred HHHHHHHHHHcCCCHHhcccCCCC
Confidence 999999999999999888876543
No 236
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.52 E-value=1.7e-07 Score=71.45 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=54.3
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHH---cCCCCCCCEEEEEeCCCCCeeecCCCCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQ---KLQLGSFPTILFFPKHSSKPIKYPSERRD 452 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~---~~~I~~~PTi~lf~~g~~~~~~y~gg~~~ 452 (464)
++.|+++||++|+.+.+.++++ ++.+..+|++.+ +++. + ++++.++|++++ +|+ . ..| .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~~~-~~~~-~~~~~~~~~~vP~l~~--~g~--~--~~g--~~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDISLD-DEAR-DYVMALGYVQAPVVEV--DGE--H--WSG--FR 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHH-HHHHHTTCBCCCEEEE--TTE--E--EES--CC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECCCC-HHHH-HHHHHcCCCccCEEEE--CCe--E--EcC--CC
Confidence 6789999999999999998864 478888999988 6655 4 799999999973 554 2 223 57
Q ss_pred HHHHHHHHH
Q 012424 453 VDSLMAFVD 461 (464)
Q Consensus 453 ~e~L~~fI~ 461 (464)
.++|.++|+
T Consensus 66 ~~~l~~~l~ 74 (75)
T 1r7h_A 66 PERIKQLQA 74 (75)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888888874
No 237
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.52 E-value=1.6e-07 Score=88.17 Aligned_cols=92 Identities=11% Similarity=0.206 Sum_probs=69.5
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| ++||++|....|.|.++.++|++.++.|+.|++|.. +.+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS- 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH-
Confidence 4689999999 999999999999999999999755799999887542 02456
Q ss_pred HcCCC-----CCCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 012424 423 QKLQL-----GSFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I-----~~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l 463 (464)
+.|++ ..+|++++++..+.....+.| ...+.++|.+.|++|
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 67777 368999999654432222222 136789999998876
No 238
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.51 E-value=3.2e-07 Score=83.87 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=39.4
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 414 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d 414 (464)
.++++||.||++|||+|+.+.|.+.++.+.+.+ ++.|..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 578899999999999999999999999999987 7999998875
No 239
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.50 E-value=9.6e-07 Score=75.27 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=79.4
Q ss_pred Ceeec-CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012424 353 NLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 431 (464)
Q Consensus 353 ~v~~L-~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~P 431 (464)
.+..| +.+++++++. .++.++|-|+++||++| .+.|.++|+.+ + ++.|+..+ + .+++ ++|++. .|
T Consensus 22 ~~~~i~s~~e~e~fi~---~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~---~-~~v~-~~~~v~-~~ 87 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIA---ATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIST---D-SEVL-THYNIT-GN 87 (124)
T ss_dssp CCEECCSHHHHHHHHH---TSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEEC---C-HHHH-HHTTCC-SS
T ss_pred cceEcCCHHHHHHHHh---cCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEC---h-HHHH-HHcCCC-CC
Confidence 45555 4577888886 68899999999999999 56899999999 4 69998775 3 7888 899998 89
Q ss_pred EEEEEeCCCCCeeecCC---CCCCHHHHHHHHHH
Q 012424 432 TILFFPKHSSKPIKYPS---ERRDVDSLMAFVDA 462 (464)
Q Consensus 432 Ti~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~ 462 (464)
++++|++.......|.| +..+.++|.+||+.
T Consensus 88 ~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 88 TICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 121 (124)
T ss_dssp CEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHH
T ss_pred eEEEEEcCCCCceeecCcccCCCCHHHHHHHHHH
Confidence 99999987655778876 46899999999975
No 240
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.49 E-value=1.8e-07 Score=89.55 Aligned_cols=93 Identities=18% Similarity=0.166 Sum_probs=70.0
Q ss_pred CCCc-EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------------cHHHHHH
Q 012424 371 RQEP-WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------------QKEYAKQ 423 (464)
Q Consensus 371 ~~k~-vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--------------------------~~~l~~~ 423 (464)
.++. +|++||++||++|..+.+.|.++.++|++.++.|+.|++|.. +.+++ +
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia-~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA-R 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH-H
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH-H
Confidence 3564 566889999999999999999999999866799999998642 14678 7
Q ss_pred cCCCC-------CCCEEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHhC
Q 012424 424 KLQLG-------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDALR 464 (464)
Q Consensus 424 ~~~I~-------~~PTi~lf~~g~~~~~~y~gg---~~~~e~L~~fI~~l~ 464 (464)
.|++. .+|+++++...+.....+.+. .++.++|...|++++
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 88987 899999996444322222121 268999999998763
No 241
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.48 E-value=4.8e-07 Score=84.06 Aligned_cols=43 Identities=19% Similarity=0.122 Sum_probs=39.2
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 414 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d 414 (464)
+++++||+|||+||++| ...|.|.++.++|++.++.|+.|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 57899999999999999 78999999999998767999999875
No 242
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.46 E-value=4.7e-07 Score=84.25 Aligned_cols=92 Identities=11% Similarity=0.170 Sum_probs=69.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| ++||++|....|.|.++.++|++.++.|+.|++|.. +.+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 125 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 125 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH-
Confidence 4689999999 999999999999999999999766799999987532 03466
Q ss_pred HcCCCC------CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHh
Q 012424 423 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~------~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l 463 (464)
+.|++. .+|+++++...++....+.+ ..++.+++.+.|++|
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 677874 68999999655432222222 125788999988876
No 243
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.43 E-value=5.6e-07 Score=80.58 Aligned_cols=92 Identities=11% Similarity=0.112 Sum_probs=67.6
Q ss_pred CCCcEEEEEecCCCh-hHHhhHHHHHHHHHHhcC--CCeEEEEEEcCC-Cc-----------------------------
Q 012424 371 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAG--NGVKVGKFRADG-DQ----------------------------- 417 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~-~C~~~~p~~~~la~~~~~--~~v~~~~Id~d~-~~----------------------------- 417 (464)
.++++||+||++||+ .|....+.+.++.+++.. .++.++.|.+|. +.
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 478999999999997 699999999999999963 468888888762 10
Q ss_pred HHHHHHcCC---------CCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQ---------LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~---------I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.+++ +.|+ +...|+++++...++....+.|...+.++|.+.|+++
T Consensus 107 ~~~~-~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLL-DAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHH-HHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHH-HHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 2345 4544 3345888888654433334555457899999999875
No 244
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.42 E-value=6.5e-07 Score=81.43 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=68.3
Q ss_pred CCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHcC
Q 012424 371 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~------------------------~~~l~~~~~ 425 (464)
.++++||+||+ +||++|....|.|.++.++|++.++.|+.|+.|.. +.+++ +.|
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~-~~y 107 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALT-RNF 107 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHH-HHT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHH-HHh
Confidence 46899999995 99999999999999999999765799999987632 02455 567
Q ss_pred CCC------CCCEEEEEeCCCCCeeecCCC---CCCHHHHHHHHHHh
Q 012424 426 QLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~------~~PTi~lf~~g~~~~~~y~gg---~~~~e~L~~fI~~l 463 (464)
++. ..|+++++...+.....+.+. .++.++|.+.|++|
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 775 369999997544333333331 24789999988876
No 245
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.40 E-value=1.3e-07 Score=84.38 Aligned_cols=98 Identities=12% Similarity=0.279 Sum_probs=71.2
Q ss_pred HHHHHhhcCCCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHH
Q 012424 362 MENLARLDHRQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEY 420 (464)
Q Consensus 362 f~~~i~~~~~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--------------------~~~l 420 (464)
+.++.. ++++++|+|| ++||++|....|.|.++.++|++.++.++.|+.|.. +.++
T Consensus 26 Lsd~~~---~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v 102 (164)
T 4gqc_A 26 LYEVLK---RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREV 102 (164)
T ss_dssp HHHHHH---TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHH
T ss_pred HHHHhc---CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHH
Confidence 455544 6889999998 999999999999999999999877899999987642 1356
Q ss_pred HHHcCCCC----------CCCEEEEEeCCCCCeeec----CCCCCCHHHHHHHHHHh
Q 012424 421 AKQKLQLG----------SFPTILFFPKHSSKPIKY----PSERRDVDSLMAFVDAL 463 (464)
Q Consensus 421 ~~~~~~I~----------~~PTi~lf~~g~~~~~~y----~gg~~~~e~L~~fI~~l 463 (464)
+ +.|+|. ..|++++++..+.....+ ..+..+.+++.+.+++|
T Consensus 103 ~-~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 103 I-KLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp H-HHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred H-HHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 7 778773 368888886444322221 12245788888888765
No 246
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.38 E-value=5.8e-07 Score=81.92 Aligned_cols=42 Identities=26% Similarity=0.343 Sum_probs=37.3
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 413 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~ 413 (464)
.++++||.|+.+|||+|+.+.|.+.++.+++.+ +|.|..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 468899999999999999999999999999987 788876655
No 247
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.38 E-value=5.7e-07 Score=85.50 Aligned_cols=86 Identities=16% Similarity=0.285 Sum_probs=64.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------------------- 415 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~----------------------------------- 415 (464)
..+.+|+.|+.+|||+|+.+.+.+.++.+. + +|.|..+...-
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 356789999999999999999999887664 3 57777665420
Q ss_pred --------------CcHHHHHHcCCCCCCCEEEEEeC-CCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 416 --------------DQKEYAKQKLQLGSFPTILFFPK-HSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 416 --------------~~~~l~~~~~~I~~~PTi~lf~~-g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.+.+++ ++++|.++||+++... |+ .....| ..+.++|.++|++.
T Consensus 173 ~~~~~~~~~~~~v~~~~~l~-~~~gv~gtPt~vi~~~~G~--~~~~~G-~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 173 VPANVSTEQMKVLSDNEKLM-DDLGANVTPAIYYMSKENT--LQQAVG-LPDQKTLNIIMGNK 231 (241)
T ss_dssp CCSSCCHHHHHHHHHHHHHH-HHHTCCSSCEEEEEETTTE--EEEEES-SCCHHHHHHHTTC-
T ss_pred ccccCCHHHHHHHHHHHHHH-HHcCCCCCCEEEEECCCCC--EEEecC-CCCHHHHHHHHHHH
Confidence 013466 7899999999999863 53 334455 68999999998764
No 248
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.37 E-value=1.4e-06 Score=77.10 Aligned_cols=90 Identities=10% Similarity=0.077 Sum_probs=65.3
Q ss_pred CCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012424 371 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~~~~~I 427 (464)
.++++||+||+ .||++|....|.+.++.+++ . ++.|+.|+.|.. +..++ +.|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFG-RDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHH-HHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHH-HHhCC
Confidence 47899999995 99999999999999999888 3 688888876532 13456 66776
Q ss_pred C----C--CCEEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 012424 428 G----S--FPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~----~--~PTi~lf~~g~~~~~~y~g----g~~~~e~L~~fI~~l 463 (464)
. + .|++++++..+.....+.| ...+.+++.+.|++|
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred ccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 5 3 3999999654433333322 234668899888865
No 249
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.36 E-value=1e-06 Score=83.75 Aligned_cols=93 Identities=11% Similarity=0.189 Sum_probs=71.0
Q ss_pred CCCcEEEEEec-CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fya-~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+||+ .||++|....|.|.++.++|++.++.|+.|++|.. +.+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~- 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS- 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH-
Confidence 47899999999 99999999999999999999876799999987642 13567
Q ss_pred HcCCCC------CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHhC
Q 012424 423 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDALR 464 (464)
Q Consensus 423 ~~~~I~------~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l~ 464 (464)
+.|++. .+|+++++...+.....+.+ ..++.+++.+.|++++
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~lq 205 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAFQ 205 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 778887 68999999654432222111 1367889999888763
No 250
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=98.34 E-value=9.4e-07 Score=90.74 Aligned_cols=144 Identities=11% Similarity=0.129 Sum_probs=92.0
Q ss_pred cEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCC-CCcHHHHHHHHHHHHHh-----CCcEEEEcCChHHHHHHHHhcCC
Q 012424 114 DIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTG-RLNPETYRFFDEVEKHF-----GIRIEYMFPDAVEVQALVRSKGL 186 (464)
Q Consensus 114 ~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg-~~fpeT~~~~~~~~~~~-----gl~i~~~~p~~~~~~~~~~~~g~ 186 (464)
+++|++|||+||+++ +++.+.+.++..+|+|++ +.-++..+.+.++++.+ |++++++.-... ... +... .
T Consensus 189 kvlvalSGGvDS~vll~ll~~~G~~v~av~v~~~~~~~~~~~~~v~~~a~~l~~~~ggi~~~vv~~~~~-~~~-i~~~-~ 265 (413)
T 2c5s_A 189 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEV-QKT-INKE-I 265 (413)
T ss_dssp EEEEECCSSSHHHHHHHHHHHBTEEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHH-HHH-HHHH-S
T ss_pred eEEEEeCCCChHHHHHHHHHHcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEECcHH-HHH-HHhc-C
Confidence 589999999999776 888888878888999986 44467778888888888 888887743211 111 1111 1
Q ss_pred CCCCCcchhhh--hhccccchHHHHhc--cCcEEEEeeeccCCcc-cccCCceeecCCCCcCccCCCCCeEEEEeCccCc
Q 012424 187 FSFYEDGHQEC--CRVRKVRPLRRALK--GLRAWITGQRKDQSPG-TRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVK 261 (464)
Q Consensus 187 ~~~~~~~~~~C--c~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~-~R~~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt 261 (464)
+ ....| |+.....-+.+..+ +.+++++|...+|-.. .+.++.. .... .+..-++||+.++
T Consensus 266 ---~--~~~~c~~~Rr~~~~~~~~~A~~~g~~~I~tG~~~dD~ae~~l~~l~~--~~~~--------~~~~virPL~~l~ 330 (413)
T 2c5s_A 266 ---P--SSYSMTVMRRMMMRITERIAEERNALAITTGESLGQVASQTLDSMHT--INEV--------TNYPVIRPLITMD 330 (413)
T ss_dssp ---C--GGGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTTSCCHHHHHH--HGGG--------CCSCEECTTTTCC
T ss_pred ---C--cccHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHhc--cccc--------CCCEEEeccCCCC
Confidence 1 11133 22222223333333 5668999998877531 1111111 1100 1244689999999
Q ss_pred HHHHHHHHHhcCCC
Q 012424 262 GNDIWNFLRTMDVP 275 (464)
Q Consensus 262 ~~DVw~yi~~~~lp 275 (464)
..||.+|.+..|++
T Consensus 331 K~eI~~~a~~~Gl~ 344 (413)
T 2c5s_A 331 KLEIIKIAEEIGTY 344 (413)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999999994
No 251
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.31 E-value=1.3e-06 Score=81.99 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=79.7
Q ss_pred CCeeec-CcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 352 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 352 ~~v~~L-~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
..+++| +.+++++++. .++.+||-||++| |..+.+.|.++|+.+. .+.|+... + .+++ ++|+|.+
T Consensus 9 ~~~~~l~s~~~~~~~l~---~~~v~vVgff~~~---~~~~~~~f~~~A~~l~--~~~F~~t~---~-~~v~-~~~~v~~- 74 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIA---ATEVAVIGFFQDL---EIPAVPILHSMVQKFP--GVSFGIST---D-SEVL-THYNITG- 74 (227)
T ss_dssp CCCEECCSHHHHHHHHH---TSSEEEEEECSCS---CSTHHHHHHHHTTTCT--TSEEEEEC---C-HHHH-HHTTCCS-
T ss_pred CCCeeeCCHHHHHHHHh---cCCeEEEEEecCC---CchhHHHHHHHHHhCC--CceEEEEC---C-HHHH-HHcCCCC-
Confidence 356666 5589999887 7899999999998 5678899999999994 68888743 5 7999 8999997
Q ss_pred CEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHH
Q 012424 431 PTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDA 462 (464)
Q Consensus 431 PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~ 462 (464)
|++++|++.......|.| |.++.++|.+||+.
T Consensus 75 p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~ 109 (227)
T 4f9z_D 75 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 109 (227)
T ss_dssp SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHH
T ss_pred CeEEEEEecCcccccccccccCCCCHHHHHHHHHH
Confidence 999999976544678875 36899999999975
No 252
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.25 E-value=1.3e-06 Score=71.48 Aligned_cols=68 Identities=16% Similarity=0.190 Sum_probs=47.5
Q ss_pred hHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHcCCCCCCCEEE
Q 012424 361 GMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPTIL 434 (464)
Q Consensus 361 ~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~------~~l~~~~~~I~~~PTi~ 434 (464)
.+++++. .+ .++.|+++||++|+.+.+.|+++...++ + +..+|++.+. ..+. +.+++.++|++
T Consensus 4 ~~~~~i~---~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~--~--~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~i- 72 (105)
T 1kte_A 4 FVNSKIQ---PG--KVVVFIKPTCPFCRKTQELLSQLPFKEG--L--LEFVDITATSDTNEIQDYLQ-QLTGARTVPRV- 72 (105)
T ss_dssp HHHHHCC---TT--CEEEEECSSCHHHHHHHHHHHHSCBCTT--S--EEEEEGGGSTTHHHHHHHHH-HHHSCCCSCEE-
T ss_pred HHHhhcc---cC--CEEEEEcCCCHhHHHHHHHHHHcCCCCC--c--cEEEEccCCCCHHHHHHHHH-HHhCCCCcCeE-
Confidence 4555553 22 3677999999999999999987654432 2 5556776551 2467 78999999997
Q ss_pred EEeCCC
Q 012424 435 FFPKHS 440 (464)
Q Consensus 435 lf~~g~ 440 (464)
|.+|+
T Consensus 73 -~~~g~ 77 (105)
T 1kte_A 73 -FIGKE 77 (105)
T ss_dssp -EETTE
T ss_pred -EECCE
Confidence 34665
No 253
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=98.24 E-value=9e-07 Score=90.59 Aligned_cols=148 Identities=17% Similarity=0.232 Sum_probs=89.3
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCc-EEEEcCChHHHHH----HHHhcCC
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDAVEVQA----LVRSKGL 186 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~-i~~~~p~~~~~~~----~~~~~g~ 186 (464)
.+++|++|||+||+++ +++.+.+.++..+++|.|.. +-.++++++++++|++ ++++.-....... .+..+..
T Consensus 6 ~kVvvalSGGlDSsvll~lL~e~G~eV~av~vd~g~~--~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~a~ 83 (413)
T 2nz2_A 6 GSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQK--EDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQSSAL 83 (413)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHTTEEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCC
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEECCcH--HHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHHhCcc
Confidence 4699999999998765 88877777788999999964 4479999999999997 6665332111111 1111211
Q ss_pred CCCCCcchhhhhhccccc-----hHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCCcCccCCCCCeEEEEeCc-
Q 012424 187 FSFYEDGHQECCRVRKVR-----PLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVA- 258 (464)
Q Consensus 187 ~~~~~~~~~~Cc~~~Kv~-----Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~~PI~- 258 (464)
++. .+-|....-+ -+.+..+ +.+++++|.........|..+...... +++-.+.|+.
T Consensus 84 ---~e~--~y~~g~~~aRp~i~~~l~~~A~~~Ga~~IatGh~~~~nDq~rf~lg~~~l~----------p~l~ii~Pl~d 148 (413)
T 2nz2_A 84 ---YED--RYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLA----------PQIKVIAPWRM 148 (413)
T ss_dssp ---BTT--TBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGGC
T ss_pred ---ccc--ccccccccchHHHHHHHHHHHHHcCCCEEEECCcCcccchHHHHHHHHhcC----------CCCceeccccc
Confidence 110 0111111111 1222222 667999999863211122211110111 2356789999
Q ss_pred -----cC-cHHHHHHHHHhcCCCcc
Q 012424 259 -----NV-KGNDIWNFLRTMDVPIN 277 (464)
Q Consensus 259 -----dW-t~~DVw~yi~~~~lp~n 277 (464)
+| +.+||.+|.+++|||+.
T Consensus 149 ~~~ll~~~sK~EI~~yA~~~Gip~~ 173 (413)
T 2nz2_A 149 PEFYNRFKGRNDLMEYAKQHGIPIP 173 (413)
T ss_dssp HHHHTTCC-CHHHHHHHHHTTCCCC
T ss_pred hhhhccCCCHHHHHHHHHHcCCCee
Confidence 89 99999999999999985
No 254
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.24 E-value=2.8e-06 Score=80.32 Aligned_cols=90 Identities=13% Similarity=0.255 Sum_probs=65.7
Q ss_pred CCCcEEEEEe-cCCChhHH-hhHHHHHHHHHHhcCCCe-EEEEEEcCCC---------------------cHHHHHHcCC
Q 012424 371 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGV-KVGKFRADGD---------------------QKEYAKQKLQ 426 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~-~~~p~~~~la~~~~~~~v-~~~~Id~d~~---------------------~~~l~~~~~~ 426 (464)
.++++||+|| ++||++|. ...|.|.++.++|++.++ .|+.|+.|.. +.+++ +.|+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~g 110 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFT-EGMG 110 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHH-HHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHH-HHhC
Confidence 4789999999 99999999 999999999999976679 8999987642 13567 7788
Q ss_pred CC-----------CCCEEEEEeCCCCCeeecCCC--C------CCHHHHHHHHHH
Q 012424 427 LG-----------SFPTILFFPKHSSKPIKYPSE--R------RDVDSLMAFVDA 462 (464)
Q Consensus 427 I~-----------~~PTi~lf~~g~~~~~~y~gg--~------~~~e~L~~fI~~ 462 (464)
+. ..|+.+++++|+.. ..+.+. . .+.+++.+.|+.
T Consensus 111 v~~~~~~~g~~~~~~p~t~li~~G~i~-~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 111 MLVGKEDLGFGKRSWRYSMLVKNGVVE-KMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEEE-EEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred ceeecccccCcccceeEEEEEECCEEE-EEEEeccCCCccceecCHHHHHHHhhh
Confidence 75 35877777766632 222221 1 477888777753
No 255
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.24 E-value=2.7e-06 Score=77.48 Aligned_cols=92 Identities=12% Similarity=0.216 Sum_probs=61.7
Q ss_pred CCCc-EEEEEecCCChhHHh-hHHHHHHHHHHhcCCCeE-EEEEEcCCC----------------------cHHHHHHcC
Q 012424 371 RQEP-WLVVLYAPWCQFCQA-MEGSYVELADKLAGNGVK-VGKFRADGD----------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~-vlV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v~-~~~Id~d~~----------------------~~~l~~~~~ 425 (464)
.+++ +|+.||++||++|.. ..|.|.++.++|++.++. ++.|+.+.. +.+++ +.|
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 133 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFT-KAI 133 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHH-HHc
Confidence 3564 455566999999999 799999999999876788 999987642 13466 677
Q ss_pred CCC-----------CCCEEEEEeCCCCCeeecC--CCCCCHHHHHHHHHHh
Q 012424 426 QLG-----------SFPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~-----------~~PTi~lf~~g~~~~~~y~--gg~~~~e~L~~fI~~l 463 (464)
++. ..|+.+++++|+....... .+..+..++.+.|++|
T Consensus 134 Gv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~~L 184 (184)
T 3uma_A 134 GMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLELL 184 (184)
T ss_dssp TCEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHHHC
T ss_pred CCceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHhhC
Confidence 774 3577777786664222221 1244555566665543
No 256
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=98.23 E-value=1.3e-06 Score=90.09 Aligned_cols=157 Identities=15% Similarity=0.230 Sum_probs=93.4
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHH----HHHHhcCC
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQ----ALVRSKGL 186 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl-~i~~~~p~~~~~~----~~~~~~g~ 186 (464)
.+|+|+||||.||+++ +++.+.+.++..+++|.|..-.+-+++++++++++|+ +++++.-. ..+. ..+.....
T Consensus 11 ~KVvVA~SGGlDSSvll~~L~e~G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~~-eef~~~v~p~i~~na~ 89 (455)
T 1k92_A 11 QRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCR-KQLVAEGIAAIQCGAF 89 (455)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECH-HHHHHHHHHHHHHTCC
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeCh-HHHHHHhHHHHHcCCc
Confidence 5699999999998766 7887778889999999996423457899999999999 77776432 1121 11222111
Q ss_pred C---C---CCC--cchhhhhhccccchHHHHhc--cCcEEEEeeec--cCCcccccCCceeecCCCCcCccCCCCCeEEE
Q 012424 187 F---S---FYE--DGHQECCRVRKVRPLRRALK--GLRAWITGQRK--DQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 254 (464)
Q Consensus 187 ~---~---~~~--~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~--~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~ 254 (464)
+ . .+. ...+.|. ..-+.++.+ +.+.+++|... ++. .|......... +++--+
T Consensus 90 y~~eg~rcY~l~t~~aRp~i----~~~l~e~A~e~Gad~IAtGht~kgnDq--~rf~~~~~al~----------p~l~vi 153 (455)
T 1k92_A 90 HNTTGGLTYFNTTPLGRAVT----GTMLVAAMKEDGVNIWGDGSTYKGNDI--ERFYRYGLLTN----------AELQIY 153 (455)
T ss_dssp CCEETTEECCCHHHHHHHHH----HHHHHHHHHHTTCCEEECCCCTTSSHH--HHHHHHHHHHC----------TTCEEE
T ss_pred ccccCceecccCCcchHHHH----HHHHHHHHHHcCCCEEEECCcCCCCCH--HHHHHHHHhcC----------CCCEEE
Confidence 1 0 000 0001111 011222222 66789999852 221 22211111111 235568
Q ss_pred EeCcc-------CcHHHHHHHHHhcCCCcchhhhcCCcc
Q 012424 255 NPVAN-------VKGNDIWNFLRTMDVPINSLHSQGYIS 286 (464)
Q Consensus 255 ~PI~d-------Wt~~DVw~yi~~~~lp~npLy~~Gy~s 286 (464)
.|+.+ ++.+||.+|.+++|||+.---++-|.+
T Consensus 154 aPlr~~~ll~~~lsK~EI~~yA~~~GIp~~~t~~~pyS~ 192 (455)
T 1k92_A 154 KPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYST 192 (455)
T ss_dssp CGGGCHHHHHHSSSHHHHHHHHHHTTCCCCCCCCCSSEE
T ss_pred CeeccccccccCCCHHHHHHHHHHcCCCcccCCCCCCcc
Confidence 99988 699999999999999986323333443
No 257
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.21 E-value=1.5e-06 Score=77.26 Aligned_cols=68 Identities=12% Similarity=0.144 Sum_probs=53.3
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~~~~~I 427 (464)
.++++||+|| +.||++|....|.|.++.++| . ++.|+.|+.|.. +..++ +.|++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 118 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S-NTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALH-SQLGV 118 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHH-HHTTC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHH-HHhCc
Confidence 4689999999 899999999999999999999 3 688888876431 14566 67877
Q ss_pred CC---------CCEEEEEeCCCC
Q 012424 428 GS---------FPTILFFPKHSS 441 (464)
Q Consensus 428 ~~---------~PTi~lf~~g~~ 441 (464)
.. .|+++++...+.
T Consensus 119 ~~~~~~~~g~~~p~~~liD~~G~ 141 (165)
T 1q98_A 119 DIQTGPLAGLTSRAVIVLDEQNN 141 (165)
T ss_dssp EECSSTTTTSBCCEEEEECTTSB
T ss_pred eecccccCCccceeEEEEcCCCE
Confidence 53 499999965443
No 258
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.21 E-value=3.1e-06 Score=75.15 Aligned_cols=89 Identities=12% Similarity=0.094 Sum_probs=63.9
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~~~~~I 427 (464)
.+++++|+|| +.||++|....|.+.++.++ . ++.++.|+.|.. +.+++ +.|++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 120 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFG-ENYGV 120 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHH-HHHTC
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHH-HHhCC
Confidence 4789999999 78999999999999998877 3 588888876532 13556 66777
Q ss_pred CC------CCEEEEEeCCCCCeee-c---CCCCCCHHHHHHHHHHh
Q 012424 428 GS------FPTILFFPKHSSKPIK-Y---PSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~------~PTi~lf~~g~~~~~~-y---~gg~~~~e~L~~fI~~l 463 (464)
.. .|++++++..++.... + .....+.+++.+.|+++
T Consensus 121 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 121 VMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp EETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred ccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 64 8999999654432222 1 12245788888888764
No 259
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.21 E-value=1.5e-06 Score=83.26 Aligned_cols=93 Identities=11% Similarity=0.174 Sum_probs=70.0
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++++||+|| +.||++|....|.|.++.++|++.++.|+.|++|.. +.+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va- 168 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 168 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHH-
Confidence 4789999999 999999999999999999999876799999987642 13466
Q ss_pred HcCCCC------CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHhC
Q 012424 423 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDALR 464 (464)
Q Consensus 423 ~~~~I~------~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l~ 464 (464)
+.|++. .+|+++++...+.....+.+ ..++.+++.+.|+.++
T Consensus 169 ~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~alq 219 (254)
T 3tjj_A 169 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 219 (254)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhhc
Confidence 677774 57999999654432222111 1367899999888763
No 260
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.19 E-value=1e-06 Score=73.59 Aligned_cols=58 Identities=14% Similarity=0.210 Sum_probs=45.2
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeE---EEEEEcCCCc------HHHHHHcCCCCCCCEEEEEeCCC
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVK---VGKFRADGDQ------KEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~---~~~Id~d~~~------~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
...++.|+++||++|+.+.+.|+++ ++. |..+|++.+. .++. +.+++.++|++++ +|+
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~-------~~~~~~~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~v~i--~g~ 84 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKF-------SFKRGAYEIVDIKEFKPENELRDYFE-QITGGKTVPRIFF--GKT 84 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTS-------CBCTTSEEEEEGGGSSSHHHHHHHHH-HHHSCCSSCEEEE--TTE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHc-------CCCcCceEEEEccCCCChHHHHHHHH-HHhCCCCcCEEEE--CCE
Confidence 3457789999999999999988764 344 7888888762 2677 7899999998743 665
No 261
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.16 E-value=4.8e-06 Score=74.17 Aligned_cols=90 Identities=14% Similarity=0.177 Sum_probs=63.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc--HHHHHH-------------------cCCCC
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--KEYAKQ-------------------KLQLG 428 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~--~~l~~~-------------------~~~I~ 428 (464)
.++++||+|| ++||++|....|.+.++.+++ . ++.|+.|..|..+ .+++ + .|++.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~-~~~~~~~~~~l~D~~~~~~~~~gv~ 122 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-GVDVTVVSMDLPFAQKRFC-ESFNIQNVTVASDFRYRDMEKYGVL 122 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHH-HHTTCCSSEEEECTTTCGGGGGTCB
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-CceEEEEeCCCHHHHHHHH-HHcCCCCeEEeecCccCcHHHhCCE
Confidence 4689999999 899999999999999999988 3 7999999876531 1222 2 33332
Q ss_pred ---------CCCEEEEEeCCCCCeeecCC----CCCCHHHHHHHHHHh
Q 012424 429 ---------SFPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ---------~~PTi~lf~~g~~~~~~y~g----g~~~~e~L~~fI~~l 463 (464)
..|++++++..+.....+.+ ...+.++|.+.|++|
T Consensus 123 ~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 123 IGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp BCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred ecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 15899999744433333322 245678899998876
No 262
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.16 E-value=1e-05 Score=75.89 Aligned_cols=90 Identities=19% Similarity=0.224 Sum_probs=66.3
Q ss_pred cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------------cHHHHHH
Q 012424 374 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------------QKEYAKQ 423 (464)
Q Consensus 374 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~------------------------------~~~l~~~ 423 (464)
.+|+.|+++||++|....+.|.++.++|++.++.++.|.+|.. +.+++ +
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va-~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA-I 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH-H
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH-H
Confidence 5666678999999999999999999999876899999987642 13466 6
Q ss_pred cCCCC------------CCCEEEEEeCCCCCeeecCC---CCCCHHHHHHHHHHhC
Q 012424 424 KLQLG------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDALR 464 (464)
Q Consensus 424 ~~~I~------------~~PTi~lf~~g~~~~~~y~g---g~~~~e~L~~fI~~l~ 464 (464)
.|++. .+|+++++...+.....+.+ ..++.++|.+.|++|+
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 77773 37999999655432222211 1368999999998763
No 263
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.13 E-value=1.8e-05 Score=70.84 Aligned_cols=45 Identities=20% Similarity=0.389 Sum_probs=38.1
Q ss_pred CCCcEEEEEecCCCh-hHHhhHHHHHHHHHHhcC--CCeEEEEEEcCC
Q 012424 371 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAG--NGVKVGKFRADG 415 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~-~C~~~~p~~~~la~~~~~--~~v~~~~Id~d~ 415 (464)
++|++||+||.+||+ .|....+.+.++.+.++. .+|.++.|.+|.
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp 78 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDP 78 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCc
Confidence 589999999999997 799999999998888753 368888888763
No 264
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.12 E-value=2.7e-06 Score=78.41 Aligned_cols=67 Identities=12% Similarity=0.167 Sum_probs=52.9
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 427 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~~~~~I 427 (464)
.++++||+|| +.||++|....|.|.++.++| . ++.|+.|..|.. +.+++ +.|++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~-~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~-~~ygv 153 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E-NTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFK-QAYGV 153 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHH-HHTTC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C-CCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHH-HHhCc
Confidence 4789999999 789999999999999999999 3 699998886532 13556 67776
Q ss_pred C---------CCCEEEEEeCCC
Q 012424 428 G---------SFPTILFFPKHS 440 (464)
Q Consensus 428 ~---------~~PTi~lf~~g~ 440 (464)
. ..|++++++..+
T Consensus 154 ~~~~~~~~g~~~p~~~lID~~G 175 (200)
T 3zrd_A 154 AITEGPLAGLTARAVVVLDGQD 175 (200)
T ss_dssp EECSSTTTTSBCCEEEEECTTS
T ss_pred eeecccCCCccccEEEEECCCC
Confidence 4 369999996544
No 265
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.12 E-value=4.6e-06 Score=75.15 Aligned_cols=92 Identities=12% Similarity=0.139 Sum_probs=61.5
Q ss_pred CCCcEEEEEe-cCCChhHH-hhHHHHHHHHHHhcCCCeEEEE-EEcCCC----------------------cHHHHHHcC
Q 012424 371 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGVKVGK-FRADGD----------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~-~~~p~~~~la~~~~~~~v~~~~-Id~d~~----------------------~~~l~~~~~ 425 (464)
.+++++|+|| ++||++|. ...|.|.++.++|++.++.++. |..|.. +.+++ +.|
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 120 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFG-KET 120 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHH-HHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHH-HHh
Confidence 3565655554 99999999 5999999999999876787775 776541 13567 677
Q ss_pred CCC-------------CCCEEEEEeCCCCCeeecC--CCCCCHHHHHHHHHHh
Q 012424 426 QLG-------------SFPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~-------------~~PTi~lf~~g~~~~~~y~--gg~~~~e~L~~fI~~l 463 (464)
++. ..|+.+++++|+....... +..++..+..+.|+.|
T Consensus 121 Gv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 121 DLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp TCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred CCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 764 4599999985553222111 1136666676666654
No 266
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.09 E-value=4.7e-06 Score=65.99 Aligned_cols=55 Identities=22% Similarity=0.373 Sum_probs=44.0
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcC-CCCCCCEEEEEeCCC
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKL-QLGSFPTILFFPKHS 440 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d--~~~~~l~~~~~-~I~~~PTi~lf~~g~ 440 (464)
-++.|+++||++|+.+.+.+++. ++.|..+|++ .. .++. +.+ ++.++|+++ .+|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv~~~~~-~~l~-~~~~~~~~vP~l~--~~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK-------GVKYTDIDASTSLR-QEMV-QRANGRNTFPQIF--IGDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH-------TCCEEEECSCHHHH-HHHH-HHHHSSCCSCEEE--ETTE
T ss_pred eEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCHHHH-HHHH-HHhCCCCCcCEEE--ECCE
Confidence 47789999999999999998875 3677888887 34 5777 788 999999984 3665
No 267
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.08 E-value=3.8e-05 Score=76.69 Aligned_cols=109 Identities=9% Similarity=0.044 Sum_probs=84.4
Q ss_pred CCeeecCcchHHHHHhhcCC-CCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHH---HcCC
Q 012424 352 QNLVTLNRTGMENLARLDHR-QEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAK---QKLQ 426 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~-~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~~~~l~~---~~~~ 426 (464)
+.|.+++.+++..+.. +. ++..++.|+.+||+.|..+.+.|.++++++.+ .++.|+.+|++.. +.++. +.|+
T Consensus 226 p~v~elt~~~~~~~~~--~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~-~~~~~~~~~~~g 302 (350)
T 1sji_A 226 PTLRRLRPEDMFETWE--DDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDF-PLLVAYWEKTFK 302 (350)
T ss_dssp CSEEECCTTTHHHHHH--SCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGC-HHHHHHHHHHCC
T ss_pred cchhhcChhhHHHHhc--CCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhh-HHHHHHHHhhcC
Confidence 4689999999998764 11 24456669999999999999999999999974 4699999999988 66551 4788
Q ss_pred CC-CCCEEEEEeCCCCCeee--cCC--CCCCHHHHHHHHHHh
Q 012424 427 LG-SFPTILFFPKHSSKPIK--YPS--ERRDVDSLMAFVDAL 463 (464)
Q Consensus 427 I~-~~PTi~lf~~g~~~~~~--y~g--g~~~~e~L~~fI~~l 463 (464)
+. .+|+++++...+..... +.+ +..+.++|.+||+.+
T Consensus 303 i~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 303 IDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp SCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred CCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 87 58999999753321233 322 368999999999875
No 268
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=98.05 E-value=1.7e-05 Score=84.35 Aligned_cols=167 Identities=14% Similarity=0.187 Sum_probs=96.1
Q ss_pred CCcEEEEechhHHHHHH-HHHHH-cCCCeEEEEEeCCCC-cHHHHHHHHHHHHHh-CCcEEEEcCChHHHHHHHHhcCCC
Q 012424 112 GNDIAIAFSGAEDVALI-EYAHL-TGRPFRVFSLDTGRL-NPETYRFFDEVEKHF-GIRIEYMFPDAVEVQALVRSKGLF 187 (464)
Q Consensus 112 ~~~i~vafSGGKDS~ll-~L~~~-~~~~i~vv~~DTg~~-fpeT~~~~~~~~~~~-gl~i~~~~p~~~~~~~~~~~~g~~ 187 (464)
++++++++|||.||+++ +|+.+ .+.++..+|+|+|.. ..|..+.++.+++.+ |++++++.-... +.. ...|..
T Consensus 255 ~~~vvvalSGGvDSsv~a~ll~~~~G~~v~~v~vd~g~~~~~e~~~~~~~~~~~l~gi~~~~vd~~~~-f~~--~l~g~~ 331 (556)
T 3uow_A 255 DHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFPDMNITKIDASEN-FLS--NLQGVT 331 (556)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHHHHCTTSEEEEEECHHH-HHH--HTTTCC
T ss_pred CceEEEEcccCCCHHHHHHHHHHHhCCeEEEEEEecCCCChHHHHHHHHHHHHhcCCCCeEEeccHHH-HHH--hhcCCC
Confidence 35799999999999766 67766 477899999999975 456777778899999 999988743321 111 122221
Q ss_pred CCCCcchhhhhhccccchHHHHhcc---C---cEEEEeeeccCCcccccCCc---eeecCCCCcCccCCCCCeEEEEeCc
Q 012424 188 SFYEDGHQECCRVRKVRPLRRALKG---L---RAWITGQRKDQSPGTRSEIP---VVQVDPVFEGLEGGVGSLVKWNPVA 258 (464)
Q Consensus 188 ~~~~~~~~~Cc~~~Kv~Pl~r~l~~---~---~~~itG~R~~ES~~~R~~~~---~~~~d~~~~~~~~~~~~~~k~~PI~ 258 (464)
-++.....|+. ..++-+.+.... . +.+.+|.-.++-...+.... .+.......+.. ....+..+.||.
T Consensus 332 -~pe~kr~iig~-~f~~vf~~~A~~~~~~~~~~~la~Gt~y~D~ies~~~~g~~~~iks~~n~~gl~-~~~~~~li~PL~ 408 (556)
T 3uow_A 332 -DPEQKRKIIGK-LFIEEFEKAVNNIDIDINKTFLLQGTLYPDIIESKCSKNLSDTIKTHHNVGGLP-KNLKFKLFEPFK 408 (556)
T ss_dssp -CHHHHHHHHHH-HHHHHHHHHHHTTCCCGGGEEEECCCCHHHHHHHSCC--------------------CCCEEECTTT
T ss_pred -ChHHHHHHHHH-HHHHHHHHHHHHcCCcccccccccCccChHHHhhcccccccceecccccccccc-cccccceEeecc
Confidence 11111222222 222333333332 2 56777864333211111100 000000000000 001345789999
Q ss_pred cCcHHHHHHHHHhcCCCcchhhhcCC
Q 012424 259 NVKGNDIWNFLRTMDVPINSLHSQGY 284 (464)
Q Consensus 259 dWt~~DVw~yi~~~~lp~npLy~~Gy 284 (464)
+++..||..|-++.|||+.-.+++=|
T Consensus 409 ~l~K~EVr~la~~lGlp~~~~~r~P~ 434 (556)
T 3uow_A 409 YLFKDDVKTLSRELNLPEEITNRHPF 434 (556)
T ss_dssp TCCHHHHHHHHHTTTCCHHHHHCCCC
T ss_pred cCcHHHHHHHHHHcCCCHHHhCCCCC
Confidence 99999999999999999887777643
No 269
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.04 E-value=1.2e-05 Score=75.89 Aligned_cols=91 Identities=15% Similarity=0.263 Sum_probs=67.3
Q ss_pred CcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------------cHHHHHH
Q 012424 373 EPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------------QKEYAKQ 423 (464)
Q Consensus 373 k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------------~~~l~~~ 423 (464)
+.+||+|| ++||++|....+.|.++.++|+..++.++.|.+|.. +.+++ +
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va-~ 108 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA-V 108 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH-H
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH-H
Confidence 48889998 999999999999999999999766799999887642 13456 6
Q ss_pred cCCCC------------CCCEEEEEeCCCCCeeec--CC-CCCCHHHHHHHHHHhC
Q 012424 424 KLQLG------------SFPTILFFPKHSSKPIKY--PS-ERRDVDSLMAFVDALR 464 (464)
Q Consensus 424 ~~~I~------------~~PTi~lf~~g~~~~~~y--~g-g~~~~e~L~~fI~~l~ 464 (464)
.|++. .+|+++++...+.....+ .. ..++.++|.+.|++|+
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 67764 579999996544322222 11 1368999999998763
No 270
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.01 E-value=6.5e-06 Score=72.09 Aligned_cols=66 Identities=9% Similarity=0.170 Sum_probs=47.4
Q ss_pred chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--cH----HHHHHcCCCCCCCEE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPTI 433 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--~~----~l~~~~~~I~~~PTi 433 (464)
+.+++++. .+ .++ .|+++||++|+.+.+.|+++. +.+..+|++.+ ++ ++. +.+++.++|++
T Consensus 40 ~~~~~~i~---~~-~Vv-vf~~~~Cp~C~~~k~~L~~~~-------i~~~~vdId~~~~~~~~~~~L~-~~~g~~tvP~i 106 (146)
T 2ht9_A 40 NQIQETIS---DN-CVV-IFSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPRI 106 (146)
T ss_dssp HHHHHHHH---HC-SEE-EEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCTTHHHHHHHHH-HHHSCCCSCEE
T ss_pred HHHHHHhc---CC-CEE-EEECCCChhHHHHHHHHHHcC-------CCeEEEECccCcCCHHHHHHHH-HHhCCCCcCeE
Confidence 56677665 33 444 499999999999999998762 45566777654 12 377 78999999998
Q ss_pred EEEeCCC
Q 012424 434 LFFPKHS 440 (464)
Q Consensus 434 ~lf~~g~ 440 (464)
+ .+|+
T Consensus 107 f--i~G~ 111 (146)
T 2ht9_A 107 F--VNGT 111 (146)
T ss_dssp E--ETTE
T ss_pred E--ECCE
Confidence 4 3665
No 271
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.01 E-value=9.7e-06 Score=66.54 Aligned_cols=65 Identities=15% Similarity=0.296 Sum_probs=47.8
Q ss_pred chHHHHHhhcCCCCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHcCCCCCC
Q 012424 360 TGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQLGSF 430 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~----l~~~~~~I~~~ 430 (464)
+.+++++. . ..++| |++ +||++|+.+.+.|.++ ++.|..+|++.+ ++ +. +.+++.++
T Consensus 8 ~~~~~~i~---~-~~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~~-~~~~~~l~-~~~g~~~v 73 (105)
T 2yan_A 8 ERLKVLTN---K-ASVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLK-AYSNWPTY 73 (105)
T ss_dssp HHHHHHHT---S-SSEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGGC-HHHHHHHH-HHHTCCSS
T ss_pred HHHHHHhc---c-CCEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHH-HHHCCCCC
Confidence 34555553 3 34554 776 9999999999999876 377889999987 55 34 55789999
Q ss_pred CEEEEEeCCC
Q 012424 431 PTILFFPKHS 440 (464)
Q Consensus 431 PTi~lf~~g~ 440 (464)
|++ |.+|+
T Consensus 74 P~v--~i~g~ 81 (105)
T 2yan_A 74 PQL--YVKGE 81 (105)
T ss_dssp CEE--EETTE
T ss_pred CeE--EECCE
Confidence 998 34665
No 272
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.00 E-value=8e-06 Score=72.98 Aligned_cols=69 Identities=12% Similarity=0.134 Sum_probs=53.2
Q ss_pred CCCcEEEEEe-cCCChhHHh-hHHHHHHHHHHhcCCCe-EEEEEEcCCC----------------------cHHHHHHcC
Q 012424 371 RQEPWLVVLY-APWCQFCQA-MEGSYVELADKLAGNGV-KVGKFRADGD----------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~-~~p~~~~la~~~~~~~v-~~~~Id~d~~----------------------~~~l~~~~~ 425 (464)
.++++||+|| ++||++|.. ..|.|.++.++|++.++ .|+.|+.|.. +.+++ +.|
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~~~~~fp~l~D~~~~~~-~~~ 108 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHGADDKVQMLADPGGAFT-KAV 108 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCcceEEEECCCCcHH-HHc
Confidence 4678888887 999999999 99999999999976679 9999987542 13466 677
Q ss_pred CCCCC-----------CEEEEEeCCC
Q 012424 426 QLGSF-----------PTILFFPKHS 440 (464)
Q Consensus 426 ~I~~~-----------PTi~lf~~g~ 440 (464)
++... |+.+++++|+
T Consensus 109 gv~~~~~~~~g~~~~~p~t~lI~~G~ 134 (167)
T 2wfc_A 109 DMELDLSAVLGNVRSKRYSLVIEDGV 134 (167)
T ss_dssp TCEECCHHHHSSCEECCEEEEEETTE
T ss_pred CCccccccccCcccceEEEEEEeCCE
Confidence 77543 8777776665
No 273
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.00 E-value=7.2e-06 Score=70.22 Aligned_cols=67 Identities=10% Similarity=0.169 Sum_probs=47.5
Q ss_pred cchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--cH----HHHHHcCCCCCCCE
Q 012424 359 RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPT 432 (464)
Q Consensus 359 ~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--~~----~l~~~~~~I~~~PT 432 (464)
.+.+++++. .+ .+ +.|+++||++|+.+.+.|+++ ++.|..+|++.+ .+ ++. +.+++.++|+
T Consensus 17 ~~~~~~~i~---~~-~v-vvf~~~~Cp~C~~~~~~L~~~-------~i~~~~vdid~~~~~~~~~~~l~-~~~g~~~vP~ 83 (130)
T 2cq9_A 17 VNQIQETIS---DN-CV-VIFSKTSCSYCTMAKKLFHDM-------NVNYKVVELDLLEYGNQFQDALY-KMTGERTVPR 83 (130)
T ss_dssp HHHHHHHHH---HS-SE-EEEECSSCSHHHHHHHHHHHH-------TCCCEEEETTTSTTHHHHHHHHH-HHHSSCCSSE
T ss_pred HHHHHHHHc---CC-cE-EEEEcCCChHHHHHHHHHHHc-------CCCcEEEECcCCcCcHHHHHHHH-HHhCCCCcCE
Confidence 345666654 33 34 449999999999999999876 245666777654 12 377 7899999999
Q ss_pred EEEEeCCC
Q 012424 433 ILFFPKHS 440 (464)
Q Consensus 433 i~lf~~g~ 440 (464)
++ .+|+
T Consensus 84 l~--i~G~ 89 (130)
T 2cq9_A 84 IF--VNGT 89 (130)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 84 3665
No 274
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.99 E-value=1.9e-05 Score=63.44 Aligned_cols=74 Identities=15% Similarity=0.318 Sum_probs=54.1
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---Hc-CCCCCCCEEEEEeCCCCCeeecCCCC
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QK-LQLGSFPTILFFPKHSSKPIKYPSER 450 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~---~~-~~I~~~PTi~lf~~g~~~~~~y~gg~ 450 (464)
-|+.|..+|||+|+..+..|.+. ++.|-.+|++.+ ++... +. .+.+++|+|+ +.+|. ... .
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-------gi~y~~idi~~d-~~~~~~~~~~~~G~~tVP~I~-i~Dg~--~l~----~ 69 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-------RIAYDEVDIEHN-RAAAEFVGSVNGGNRTVPTVK-FADGS--TLT----N 69 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-------TCCCEEEETTTC-HHHHHHHHHHSSSSSCSCEEE-ETTSC--EEE----S
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-------CCceEEEEcCCC-HHHHHHHHHHcCCCCEeCEEE-EeCCE--EEe----C
Confidence 47789999999999999887652 588999999988 55430 22 2678899975 45665 222 2
Q ss_pred CCHHHHHHHHHHh
Q 012424 451 RDVDSLMAFVDAL 463 (464)
Q Consensus 451 ~~~e~L~~fI~~l 463 (464)
.+.++|.++|.++
T Consensus 70 ~~~~el~~~L~el 82 (92)
T 2lqo_A 70 PSADEVKAKLVKI 82 (92)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 5788899888765
No 275
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.99 E-value=2.1e-06 Score=79.11 Aligned_cols=44 Identities=23% Similarity=0.464 Sum_probs=40.8
Q ss_pred CCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCC
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGD 416 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d~~ 416 (464)
.+++||.||+.|||||+.+.|.| +++++.+++ +|.|.+++++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccCcC
Confidence 57899999999999999999999 999999986 799999999876
No 276
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.99 E-value=4.9e-06 Score=74.62 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=37.3
Q ss_pred CcEEEEEecCCChhHHhh-HHHHHHHHHHhcCCCeE-EEEEEcCC
Q 012424 373 EPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVK-VGKFRADG 415 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~-~~~Id~d~ 415 (464)
+.+|++||++||++|... .|.|.++.++|++.++. |+.|+.+.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~ 89 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAIND 89 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSC
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 577888999999999999 99999999999765788 88888764
No 277
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.98 E-value=9.1e-06 Score=76.07 Aligned_cols=90 Identities=14% Similarity=0.299 Sum_probs=65.6
Q ss_pred cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHHHcCC
Q 012424 374 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAKQKLQ 426 (464)
Q Consensus 374 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~~~~~ 426 (464)
.+|+.|+++||++|....+.|.++.++|+..++.++.|.+|.. +.+++ +.|+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va-~~yg 112 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELA-NKLK 112 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHH-HHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHH-HHhC
Confidence 4555568999999999999999999999876899999987642 13466 6777
Q ss_pred CC------------CCCEEEEEeCCCCCeee--cCC-CCCCHHHHHHHHHHhC
Q 012424 427 LG------------SFPTILFFPKHSSKPIK--YPS-ERRDVDSLMAFVDALR 464 (464)
Q Consensus 427 I~------------~~PTi~lf~~g~~~~~~--y~g-g~~~~e~L~~fI~~l~ 464 (464)
+. .+|+++++...+..... +.. ..++.++|.+.|++|+
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 73 47999999654432222 211 1378999999998763
No 278
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.98 E-value=4.6e-06 Score=70.23 Aligned_cols=69 Identities=14% Similarity=0.246 Sum_probs=49.3
Q ss_pred chHHHHHhhcCCCCcEEEEEecCCChhHHhh-HHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHcCCCCCCCE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPT 432 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~Id~d~~~------~~l~~~~~~I~~~PT 432 (464)
+.+++++. .. .++.|+++||++|+.+ .+.|.++.. ..+.|..+|++.+. .++. +.+++.++|+
T Consensus 16 ~~~~~~i~---~~--~Vvvf~~~~Cp~C~~alk~~L~~~~~----~~i~~~~vdid~~~~~~~~~~~l~-~~~g~~tvP~ 85 (118)
T 3c1r_A 16 KHVKDLIA---EN--EIFVASKTYCPYCHAALNTLFEKLKV----PRSKVLVLQLNDMKEGADIQAALY-EINGQRTVPN 85 (118)
T ss_dssp HHHHHHHH---HS--SEEEEECSSCHHHHHHHHHHHTTSCC----CGGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHc---cC--cEEEEEcCCCcCHHHHHHHHHHHcCC----CCCCeEEEECccCCChHHHHHHHH-HHhCCCCcCE
Confidence 45555554 22 3666999999999999 887766431 13788889988762 2577 7899999998
Q ss_pred EEEEeCCC
Q 012424 433 ILFFPKHS 440 (464)
Q Consensus 433 i~lf~~g~ 440 (464)
+ |.+|+
T Consensus 86 v--fi~g~ 91 (118)
T 3c1r_A 86 I--YINGK 91 (118)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 7 45666
No 279
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.96 E-value=1.4e-05 Score=72.61 Aligned_cols=42 Identities=10% Similarity=0.267 Sum_probs=36.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 413 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~ 413 (464)
..+.+|+.|+.+|||+|..+.|.+.++.+.+++ +|.|..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 467899999999999999999999999999876 677776654
No 280
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.96 E-value=1.4e-05 Score=65.15 Aligned_cols=60 Identities=22% Similarity=0.331 Sum_probs=45.8
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH---HHcC-CCCCCCEEEEEeCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA---KQKL-QLGSFPTILFFPKHS 440 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~---~~~~-~I~~~PTi~lf~~g~ 440 (464)
....-++.|+++||++|+.++..|+++ ++.+..+|++.+ ++.. ++.. +..++|++ |.+|+
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~-~~~~~~l~~~~~g~~~vP~i--fi~g~ 76 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCIDGD-NEAREAMAARANGKRSLPQI--FIDDQ 76 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECTTC-HHHHHHHHHHTTTCCCSCEE--EETTE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcCCC-HHHHHHHHHHhCCCCCCCEE--EECCE
Confidence 455677889999999999999999875 477888999887 5544 0333 88999988 44665
No 281
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.96 E-value=9.5e-06 Score=71.80 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=54.5
Q ss_pred CCCcEEEEEe-cCCChhHH-hhHHHHHHHHHHhcCCCeE-EEEEEcCCC----------------------cHHHHHHcC
Q 012424 371 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGVK-VGKFRADGD----------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~-~~~p~~~~la~~~~~~~v~-~~~Id~d~~----------------------~~~l~~~~~ 425 (464)
+++++||+|| ++||++|. ...|.|.++.++|++.++. ++.|+.|.. +.+++ +.|
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~ 112 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYT-HAL 112 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHH-HHc
Confidence 4789999999 89999999 8999999999999755788 888876531 13566 677
Q ss_pred CCC-----------CCCEEEEEeCCC
Q 012424 426 QLG-----------SFPTILFFPKHS 440 (464)
Q Consensus 426 ~I~-----------~~PTi~lf~~g~ 440 (464)
++. ..|+++++++|+
T Consensus 113 gv~~~~~~~g~~~~~~p~~~vid~G~ 138 (162)
T 1tp9_A 113 GLELDLQEKGLGTRSRRFALLVDDLK 138 (162)
T ss_dssp TCEEEETTTTSEEEECCEEEEEETTE
T ss_pred CcccccccCCCCccceeEEEEEECCE
Confidence 775 279988888554
No 282
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.95 E-value=9.3e-06 Score=64.57 Aligned_cols=71 Identities=11% Similarity=0.101 Sum_probs=52.0
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC----c----HHHHHHcCCCCCCCEEEEEeCCCCCeeec
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----Q----KEYAKQKLQLGSFPTILFFPKHSSKPIKY 446 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~----~----~~l~~~~~~I~~~PTi~lf~~g~~~~~~y 446 (464)
-++.|+++||++|+.+.+.++++ ++.+-.+|++.. . .++. +.+++.++|++++ +|+ .+
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~-------gi~~~~~~v~~~~~~~~~~~~~~l~-~~~g~~~vP~l~~--~g~--~i-- 78 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKRE-------GVDFEVIWIDKLEGEERKKVIEKVH-SISGSYSVPVVVK--GDK--HV-- 78 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHH-------TCCCEEEEGGGCCHHHHHHHHHHHH-HHHSSSCSCEEEE--TTE--EE--
T ss_pred eEEEEECCCChHHHHHHHHHHHc-------CCCcEEEEeeeCCccchHHHHHHHH-HhcCCCCcCEEEE--CCE--EE--
Confidence 36779999999999999988876 245556676631 1 4556 6788999999976 554 22
Q ss_pred CCCCCCHHHHHHHHH
Q 012424 447 PSERRDVDSLMAFVD 461 (464)
Q Consensus 447 ~gg~~~~e~L~~fI~ 461 (464)
+| .+.++|.++|+
T Consensus 79 -~G-~~~~~l~~~l~ 91 (92)
T 3ic4_A 79 -LG-YNEEKLKELIR 91 (92)
T ss_dssp -ES-CCHHHHHHHHH
T ss_pred -eC-CCHHHHHHHhc
Confidence 22 58999999886
No 283
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.88 E-value=6.8e-05 Score=75.48 Aligned_cols=110 Identities=11% Similarity=0.057 Sum_probs=84.9
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCC-CeEEEEEEcCCCcHHHH---HHcCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-GVKVGKFRADGDQKEYA---KQKLQL 427 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~-~v~~~~Id~d~~~~~l~---~~~~~I 427 (464)
..|.+++.+++..+.. ....++.+|.|+.++|+.|.++.+.|.++|+.+.+. ++.|+.+|++.. .... .+.|++
T Consensus 228 p~v~elt~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~-~~~l~~~~~~fgl 305 (367)
T 3us3_A 228 STLRKLKPESMYETWE-DDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF-PLLVPYWEKTFDI 305 (367)
T ss_dssp CSEEECCGGGHHHHHH-SCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC-TTTHHHHHHHHTC
T ss_pred cceeecChhhHHHHHh-hccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc-hhHHHHHHHhcCC
Confidence 3689999999887764 112356778899999999999999999999999974 599999999988 4322 145888
Q ss_pred C-CCCEEEEEeCCCC--CeeecCC--CCCCHHHHHHHHHHh
Q 012424 428 G-SFPTILFFPKHSS--KPIKYPS--ERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~-~~PTi~lf~~g~~--~~~~y~g--g~~~~e~L~~fI~~l 463 (464)
. .+|+++++..... +...+.+ +..+.++|.+|++.+
T Consensus 306 ~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 306 DLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp CTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred CCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 7 8999999975543 1233443 368999999999875
No 284
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.86 E-value=0.00015 Score=63.30 Aligned_cols=106 Identities=8% Similarity=0.113 Sum_probs=78.4
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEE-EecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc--CCCcHHHHHHcCCCC
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVV-LYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA--DGDQKEYAKQKLQLG 428 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~-Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~--d~~~~~l~~~~~~I~ 428 (464)
+-|.++|.++...+.. ...++.++ |...--..-..+.+.+.++|+.+++ ++.|+.+|. +.+ ..+. +.|++.
T Consensus 14 PLV~e~t~en~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg-ki~Fv~vd~~~~~~-~~~l-~~fGl~ 87 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFG---GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFAFIDSDHTDN-QRIL-EFFGLK 87 (147)
T ss_dssp -CEEECCTTTHHHHHS---SSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT-TCEEEEECTTCGGG-HHHH-HHTTCC
T ss_pred CeeEEeccccHHHHhc---CCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC-ceEEEEEecchHhH-HHHH-HHcCCC
Confidence 3688999999988864 55555544 4433334466788999999999998 799999998 555 5677 899998
Q ss_pred C--CCEEEEEeC-CCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 429 S--FPTILFFPK-HSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~--~PTi~lf~~-g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
. +|++.++.. +...-+.+..+..+.+.|.+|++.+
T Consensus 88 ~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~ 125 (147)
T 3bj5_A 88 KEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRF 125 (147)
T ss_dssp GGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHH
Confidence 5 899999975 3321234343478999999999875
No 285
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=97.86 E-value=2.8e-05 Score=79.27 Aligned_cols=151 Identities=15% Similarity=0.225 Sum_probs=87.9
Q ss_pred HcCCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHHH-----HHH
Q 012424 110 KFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQA-----LVR 182 (464)
Q Consensus 110 ~~~~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl-~i~~~~p~~~~~~~-----~~~ 182 (464)
+...+++|+||||-||+++ .++.+.+.++..+++|+|.. +=++.++++++++|+ +++++.-. ..+.. .+.
T Consensus 12 ~~~~KVVVA~SGGlDSSv~a~~Lke~G~eViavt~d~Gq~--~Ele~A~~vA~~lGi~~~~VvDl~-eef~~~v~~p~i~ 88 (421)
T 1vl2_A 12 HMKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK--DDFVAIKEKALKTGASKVYVEDLR-REFVTDYIFTALL 88 (421)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECH-HHHHHHTHHHHHT
T ss_pred cccCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEEEcCCH--HHHHHHHHHHHHcCCceEEEEecH-HHHHHhhhhHHHh
Confidence 3456799999999998665 77777788888999999963 346789999999999 77766332 22221 111
Q ss_pred hcCCC-CCCCcc---hhhhhhccccchHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCCcCccCCCCCeEEEEe
Q 012424 183 SKGLF-SFYEDG---HQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNP 256 (464)
Q Consensus 183 ~~g~~-~~~~~~---~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~~P 256 (464)
.+..+ .-|... .+-|+ . .-+.++.. |.+.+++|.-.......|........+ +.+--+.|
T Consensus 89 ~na~yeg~Y~~g~~l~Rp~i-~---~~l~~~A~~~Gad~IA~G~~~kgnDq~rf~~~~~al~----------p~~~IiaP 154 (421)
T 1vl2_A 89 GNAMYEGRYLLGTAIARPLI-A---KRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALN----------PNLKVISP 154 (421)
T ss_dssp TTCCBTTTBCCHHHHHHHHH-H---HHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTSEEECG
T ss_pred cCCcccCceeCCCcccHHHH-H---HHHHHHHHHcCCCEEEECCeeCCCChHHHHHHHHhcC----------CCCeEEcc
Confidence 11110 001101 12222 1 11222222 677999998652111012111111112 13445789
Q ss_pred Ccc-------CcHHHHHHHHHhcCCCcc
Q 012424 257 VAN-------VKGNDIWNFLRTMDVPIN 277 (464)
Q Consensus 257 I~d-------Wt~~DVw~yi~~~~lp~n 277 (464)
+.+ ++.+||.+|.+++|||+.
T Consensus 155 l~d~~~l~~~lsK~Eir~~A~e~Glp~~ 182 (421)
T 1vl2_A 155 WKDPEFLAKFKGRTDLINYAMEKGIPIK 182 (421)
T ss_dssp GGCHHHHHHTC--CHHHHHHHHHTCCCC
T ss_pred cCchhhccccCCHHHHHHHHHHcCCCcc
Confidence 999 599999999999999985
No 286
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.83 E-value=4.6e-05 Score=62.17 Aligned_cols=75 Identities=15% Similarity=0.194 Sum_probs=50.6
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHH---HHcCCCCCCCEEEEEeCCCCCeee
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYA---KQKLQLGSFPTILFFPKHSSKPIK 445 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~----~~l~---~~~~~I~~~PTi~lf~~g~~~~~~ 445 (464)
+.-++.|+++|||+|+.+++.++++ ++.+-.+|++..+ .++. ++.+++.++|++++ +|+. .
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~-------~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~-~-- 88 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDL-------GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEK-A-- 88 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHH-------TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTE-E--
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHc-------CCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCE-E--
Confidence 4457779999999999999999875 3556667776521 2232 03468999999876 3421 2
Q ss_pred cCCCCCCHHHHHHHHH
Q 012424 446 YPSERRDVDSLMAFVD 461 (464)
Q Consensus 446 y~gg~~~~e~L~~fI~ 461 (464)
.| ..+.++|.++|+
T Consensus 89 -ig-g~~~~~l~~~L~ 102 (103)
T 3nzn_A 89 -IV-GFKEKEIRESLG 102 (103)
T ss_dssp -EE-SCCHHHHHHHTT
T ss_pred -EE-cCCHHHHHHHhC
Confidence 23 278888888763
No 287
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.83 E-value=6.8e-05 Score=66.86 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=34.9
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHh--cCCCeEEEEEEc
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL--AGNGVKVGKFRA 413 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~--~~~~v~~~~Id~ 413 (464)
..+.+|+.|+..|||+|+.+.+.+.++.++| .+ +|.|...+.
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeC
Confidence 4577899999999999999999999998888 55 577766554
No 288
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.81 E-value=3.4e-05 Score=59.52 Aligned_cols=68 Identities=19% Similarity=0.353 Sum_probs=49.2
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 452 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~---~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~ 452 (464)
++.|+++||++|+.+.+.+++. ++.+..+|++.+. .++. +.+++.++|+++ .+|+ .+ + .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~~~~~~~~~~-~~~~~~~vP~l~--~~g~--~i---~---g 64 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPIDGNAAKREEMI-KRSGRTTVPQIF--IDAQ--HI---G---G 64 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECTTCSHHHHHHH-HHHSSCCSCEEE--ETTE--EE---E---S
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECCCCHHHHHHHH-HHhCCCCcCEEE--ECCE--EE---e---C
Confidence 6779999999999999988864 3677788888751 2355 678999999984 4665 22 2 2
Q ss_pred HHHHHHHHH
Q 012424 453 VDSLMAFVD 461 (464)
Q Consensus 453 ~e~L~~fI~ 461 (464)
.++|.++++
T Consensus 65 ~~~i~~~~~ 73 (82)
T 1fov_A 65 YDDLYALDA 73 (82)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 456777665
No 289
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=97.81 E-value=5.4e-05 Score=82.35 Aligned_cols=59 Identities=15% Similarity=0.293 Sum_probs=49.4
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-C-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEc
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMF 171 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~-~-~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~ 171 (464)
+++++++|||.||+++ +|+.+. + .++..+|+|.|..-....+.++++++++|++++++.
T Consensus 241 ~~vvv~lSGGvDSsVla~Ll~~alG~~~V~aV~vd~g~~~~~e~e~a~~~a~~lGI~~~vvd 302 (697)
T 2vxo_A 241 SKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVIN 302 (697)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHSCGGGEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEE
T ss_pred cceEEEccCchHHHHHHHHHHHhcCCceEEEEEeccccCCcchHHHHHHHHHHhCCcEEEec
Confidence 5699999999999776 777765 6 679999999997655567889999999999988774
No 290
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.80 E-value=0.00019 Score=64.91 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=74.6
Q ss_pred cCcchHHHHHhhc-----CCCCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCCCc-----------
Q 012424 357 LNRTGMENLARLD-----HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ----------- 417 (464)
Q Consensus 357 L~~~~f~~~i~~~-----~~~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d~~~----------- 417 (464)
+-..+|++.++.. .+.|.++|+++++||..|..+.... +++.+.++. ++.+...|++..+
T Consensus 35 F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~e~~~~~~~~~~~ 113 (178)
T 2ec4_A 35 FFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKDSNRARFLTMCNR 113 (178)
T ss_dssp CCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSHHHHHHHHHHHHH
T ss_pred eeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCchhhhhhhhhhhh
Confidence 3456777776653 4689999999999999999998554 466666665 7999999998762
Q ss_pred ---HHHHH--HcCCCCCCCEEEEEeCCC--CCeeecCCCCCCHHHHHHHHHH
Q 012424 418 ---KEYAK--QKLQLGSFPTILFFPKHS--SKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 418 ---~~l~~--~~~~I~~~PTi~lf~~g~--~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
..++. +.|++.+||++.++.... ...+....|..+.++|.+.+.+
T Consensus 114 ~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~ 165 (178)
T 2ec4_A 114 HFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMA 165 (178)
T ss_dssp HTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHH
T ss_pred hhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHH
Confidence 13440 238999999999995322 1233333347899998877754
No 291
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.80 E-value=0.00013 Score=65.94 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=35.3
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 413 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~ 413 (464)
.+.+|+.|+.+|||+|..+.+.+.++.+.+.+ +|.|..+.+
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 56689999999999999999999999998876 677766654
No 292
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.79 E-value=2.1e-05 Score=65.31 Aligned_cols=66 Identities=15% Similarity=0.356 Sum_probs=45.3
Q ss_pred chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---cHH----HHHHcCCCCCCCE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---QKE----YAKQKLQLGSFPT 432 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---~~~----l~~~~~~I~~~PT 432 (464)
+.+++++. .++ ++.|+++|||+|+.+.+.|+++ ++.+..+|++.. +.+ +. +.+++.++|+
T Consensus 10 ~~~~~~i~---~~~--v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~~~~~l~-~~~g~~tvP~ 76 (113)
T 3rhb_A 10 ESIRKTVT---ENT--VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELDQLGPQGPQLQKVLE-RLTGQHTVPN 76 (113)
T ss_dssp HHHHHHHH---HSS--EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHh---cCC--EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEeecCCCChHHHHHHHH-HHhCCCCcCE
Confidence 34455554 333 6779999999999999999864 355667777652 122 44 4568999999
Q ss_pred EEEEeCCC
Q 012424 433 ILFFPKHS 440 (464)
Q Consensus 433 i~lf~~g~ 440 (464)
+ |.+|+
T Consensus 77 i--fi~g~ 82 (113)
T 3rhb_A 77 V--FVCGK 82 (113)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 8 44665
No 293
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.78 E-value=0.00012 Score=69.63 Aligned_cols=97 Identities=10% Similarity=0.234 Sum_probs=77.0
Q ss_pred CCeeecC-cchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012424 352 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 430 (464)
Q Consensus 352 ~~v~~L~-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~ 430 (464)
+.+.+|+ .+++++++. .++.++|-|+++| |....+.|.++|+.+.+ .+.|+.+. + .+++ ++|++..
T Consensus 6 P~v~~l~s~~~~~~~l~---~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~-~~~F~~~~---~-~~v~-~~~~~~~- 72 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFIS---DKDASIVGFFDDS---FSEAHSEFLKAASNLRD-NYRFAHTN---V-ESLV-NEYDDNG- 72 (252)
T ss_dssp CCEEECCSHHHHHHHHT---SSSCEEEEEESCT---TSHHHHHHHHHHHHTTT-TSCEEEEC---C-HHHH-HHHCSSS-
T ss_pred CCceeecCHHHHHHHhh---cCCeEEEEEECCC---CChHHHHHHHHHHhccc-CcEEEEEC---h-HHHH-HHhCCCC-
Confidence 3578884 567777775 6788999999998 45567789999999976 68888773 4 7888 8999997
Q ss_pred CEEEEEeCCC------CCeeec-CCCCCCHHHHHHHHHH
Q 012424 431 PTILFFPKHS------SKPIKY-PSERRDVDSLMAFVDA 462 (464)
Q Consensus 431 PTi~lf~~g~------~~~~~y-~gg~~~~e~L~~fI~~ 462 (464)
|++++|+.+. .....| .| .++.++|.+||+.
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y~~g-~~~~~~l~~fi~~ 110 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAYTEQ-KMTSGKIKKFIQE 110 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEECCCS-SCCHHHHHHHHHH
T ss_pred CcEEEEcchhhcccccccccccCCC-CcCHHHHHHHHHh
Confidence 9999998531 236788 77 6899999999975
No 294
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.78 E-value=4.4e-05 Score=66.85 Aligned_cols=80 Identities=19% Similarity=0.358 Sum_probs=59.8
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC-----C-----------------------------
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----D----------------------------- 416 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~-----~----------------------------- 416 (464)
..+.+||.|+.++||+|+++.+.+.++ + ++.+..++.-- +
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~-~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----T-DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----C-SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----C-ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 567899999999999999999998764 2 46655543210 0
Q ss_pred -----------cHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 417 -----------QKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 417 -----------~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+.+++ ++++|+++||+++ .+|+ . ..| ..+.+.|.++|++.
T Consensus 87 ~~~~~~~~v~~~~~la-~~~gI~gtPt~vi-~nG~--~--i~G-~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 87 GGSICDNPVAETTSLG-EQFGFNGTPTLVF-PNGR--T--QSG-YSPMPQLEEIIRKN 137 (147)
T ss_dssp TCCCCSCSHHHHHHHH-HHTTCCSSCEEEC-TTSC--E--EES-CCCTTHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHH-HHhCCCccCEEEE-ECCE--E--eeC-CCCHHHHHHHHHHH
Confidence 14677 8999999999998 5665 2 334 67889999999875
No 295
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.77 E-value=3.3e-05 Score=61.31 Aligned_cols=55 Identities=18% Similarity=0.403 Sum_probs=42.8
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHcCCCCCCCEEEEEeCCC
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~----l~~~~~~I~~~PTi~lf~~g~ 440 (464)
-++.|+++||++|+.+.+.+++. ++.|..+|++.+ ++ +. +.+++.++|++ |.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~~~-~~~~~~l~-~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-------GAEFNEIDASAT-PELRAEMQ-ERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEESTTS-HHHHHHHH-HHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHH-HHhCCCCcCEE--EECCE
Confidence 47789999999999999988764 477888999876 43 44 47889999975 34665
No 296
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.70 E-value=0.00015 Score=68.87 Aligned_cols=98 Identities=8% Similarity=0.086 Sum_probs=77.8
Q ss_pred CCeeecCc-chHHHHHhhcCC-CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012424 352 QNLVTLNR-TGMENLARLDHR-QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 429 (464)
Q Consensus 352 ~~v~~L~~-~~f~~~i~~~~~-~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~ 429 (464)
+.|.+|++ +++++++. . ++.++|-|+.++| ....+.|.++|+.+.+ .+.|+... + .+++ ++|++..
T Consensus 6 P~v~~l~s~~~~~~~~~---~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~-~~~F~~t~---~-~~v~-~~~~v~~ 73 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLK---DGDDVVILGVFQGVG---DPGYLQYQDAANTLRE-DYKFHHTF---S-TEIA-KFLKVSL 73 (250)
T ss_dssp CSSEECCCHHHHHHHHH---HCSSCEEEEECSCTT---CHHHHHHHHHHHHHTT-TCCEEEEC---C-HHHH-HHHTCCS
T ss_pred CCceecCCHHHHHHHHh---cCCCeEEEEEEcCCC---chHHHHHHHHHHhhhc-CcEEEEEC---c-HHHH-HHcCCCC
Confidence 35777754 78888876 5 7899999999985 5678899999999977 68888763 4 7888 8899987
Q ss_pred CCEEEEEeCC------CCCeeecCC-CCCCHHHHHHHHHH
Q 012424 430 FPTILFFPKH------SSKPIKYPS-ERRDVDSLMAFVDA 462 (464)
Q Consensus 430 ~PTi~lf~~g------~~~~~~y~g-g~~~~e~L~~fI~~ 462 (464)
|++++|+.+ ......|.| +.++.++|.+||+.
T Consensus 74 -p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~ 112 (250)
T 3ec3_A 74 -GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVK 112 (250)
T ss_dssp -SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHH
T ss_pred -CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHH
Confidence 999999853 122577875 47899999999975
No 297
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.66 E-value=0.00024 Score=63.30 Aligned_cols=41 Identities=22% Similarity=0.478 Sum_probs=34.5
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEE
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 412 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id 412 (464)
.++++||.|+.-.||+|+.+.+.+.++.+++.+ ++.|..+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~~ 60 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE-GAKFQKNH 60 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TCEEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC-ceEEEEEe
Confidence 467899999999999999999999999999876 45555543
No 298
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.61 E-value=8e-05 Score=79.84 Aligned_cols=154 Identities=18% Similarity=0.190 Sum_probs=92.3
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc-C-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHH
Q 012424 101 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVE 176 (464)
Q Consensus 101 ~eil~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~~-~-~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~ 176 (464)
...|+..+++.+ .+++|++|||.||+++ .|+.+. + .++..++++++...+++++.++++++++|++++++.-. ..
T Consensus 314 ~~~l~~~~~~~g~~~vvvglSGGvDSsv~a~la~~alG~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~i~-~~ 392 (590)
T 3n05_A 314 VVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIE-PM 392 (590)
T ss_dssp HHHHHHHHHTTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSSCCHHHHHHHHHHHHHHTCEEEECCSH-HH
T ss_pred HHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHHHHhCcccEEEEEECCCCCCHHHHHHHHHHHHHcCCcEEEEECh-HH
Confidence 344555565555 5699999999999777 676664 6 67899999999889999999999999999998776322 22
Q ss_pred HHHHHHhcCCCCCCCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCCcCccCCCCCeEEE
Q 012424 177 VQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 254 (464)
Q Consensus 177 ~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~ 254 (464)
+......-....+...+.+.-| +..-+..... +..++.|| .++|.. ........| ..--+
T Consensus 393 ~~~~~~~l~~~~~~~~n~~ar~---r~~~l~~~A~~~g~~vl~TG-n~se~~---~Gy~t~~gd-----------~~~~~ 454 (590)
T 3n05_A 393 FDAYMASLGLTGLAEENLQSRL---RGTTLMAISNQEGHIVLAPG-NKSELA---VGYSTLYGD-----------SVGAY 454 (590)
T ss_dssp HHHHHHHHCCCTHHHHHHHHHH---HHHHHHHHHHHHTCEEBCCC-CHHHHH---HTCCCSSCT-----------TSCSB
T ss_pred HHHHHHHhcccchhhhHHHHHH---HHHHHHHHHHhcCCEEEeCC-CHHHHh---cCchhhcCC-----------Cccce
Confidence 3333222221100000111111 1111222211 44567788 444432 111100011 11237
Q ss_pred EeCccCcHHHHHHHHHhcC
Q 012424 255 NPVANVKGNDIWNFLRTMD 273 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~~ 273 (464)
+||.+++..+|+...+..+
T Consensus 455 ~Pl~~l~K~eVr~la~~lg 473 (590)
T 3n05_A 455 GPIKDVYKTSIFRLAEWRN 473 (590)
T ss_dssp CTTTTSCHHHHHHHHHHHH
T ss_pred eecCCCcHHHHHHHHHHhC
Confidence 8999999999999998876
No 299
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.59 E-value=0.00018 Score=56.24 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=48.7
Q ss_pred cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcCCC-----CCCCEEEEEeCCCCCeee
Q 012424 374 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQL-----GSFPTILFFPKHSSKPIK 445 (464)
Q Consensus 374 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~---~~l~~~~~~I-----~~~PTi~lf~~g~~~~~~ 445 (464)
..++.|+++||++|+.++..|.++. -.+.+..||.+.+. .++. +.++. .++|++++ +|+ .+
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~-----i~~~~~~vd~~~~~~~~~el~-~~~g~~~~~~~~vP~i~i--~g~--~i- 72 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN-----IAFDETIIDDYAQRSKFYDEM-NQSGKVIFPISTVPQIFI--DDE--HI- 72 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT-----CCCEEEECCSHHHHHHHHHHH-HTTTCCSSCCCSSCEEEE--TTE--EE-
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC-----CCceEEEeecCCChhHHHHHH-HHhCCCCCCCCccCEEEE--CCE--EE-
Confidence 3477899999999999998887642 13455555554331 3466 67777 89999954 665 22
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 012424 446 YPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 446 y~gg~~~~e~L~~fI~~l 463 (464)
| ..++|.++++++
T Consensus 73 --~---g~~~i~~~~~~~ 85 (89)
T 3msz_A 73 --G---GFTELKANADKI 85 (89)
T ss_dssp --E---SHHHHHHTHHHH
T ss_pred --e---ChHHHHHHHHHH
Confidence 2 355677766653
No 300
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.58 E-value=0.00039 Score=70.20 Aligned_cols=104 Identities=13% Similarity=0.041 Sum_probs=81.2
Q ss_pred CCeeecCcchHHHHHhhcCCCCcEEEEEecCCCh-hHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCC--
Q 012424 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG-- 428 (464)
Q Consensus 352 ~~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~-~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~-- 428 (464)
..+.+++.+++.++.. .+.+++|.|+.++|. .|+.+...+.+++..+.+ ++.|+.+|++.. ..++ +.|++.
T Consensus 219 p~v~elt~~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~~~-~~~~-~~~gl~~~ 292 (382)
T 2r2j_A 219 PLVREITFENGEELTE---EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCDKF-RHPL-LHIQKTPA 292 (382)
T ss_dssp CSSEECCHHHHHHHHT---TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETTTT-HHHH-HHTTCCGG
T ss_pred CceEecChhhHHHHhc---CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchHHh-HHHH-HHcCCCcc
Confidence 4688999999998765 688999999999984 466666667777767766 799999999988 8888 899997
Q ss_pred CCCEEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 012424 429 SFPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 463 (464)
Q Consensus 429 ~~PTi~lf~~g~~~~~~y~g--g~~~~e~L~~fI~~l 463 (464)
.+|.+.++..++ ...|.. +..+.++|.+||+.+
T Consensus 293 ~~P~i~i~~~~~--~y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 293 DCPVIAIDSFRH--MYVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp GCSEEEEECSSC--EEECCCSGGGGSTTHHHHHHHHH
T ss_pred CCCEEEEEcchh--cCCCCccccccCHHHHHHHHHHH
Confidence 689999886544 344432 134678999999875
No 301
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.49 E-value=0.0002 Score=59.08 Aligned_cols=67 Identities=16% Similarity=0.335 Sum_probs=47.9
Q ss_pred cchHHHHHhhcCCCCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH---HHcCCCCCC
Q 012424 359 RTGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA---KQKLQLGSF 430 (464)
Q Consensus 359 ~~~f~~~i~~~~~~k~vlV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~---~~~~~I~~~ 430 (464)
.+.+++++. .+ .++ .|+. +||++|+.++..|.++ ++.|..+|++.+ +++. ++.++..++
T Consensus 5 ~~~~~~~i~---~~-~vv-vy~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~~-~~~~~~l~~~~g~~~v 71 (109)
T 1wik_A 5 SSGLKVLTN---KA-SVM-LFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLKTFSNWPTY 71 (109)
T ss_dssp CCCHHHHHT---TS-SEE-EEESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESSSC-HHHHHHHHHHHSCCSS
T ss_pred HHHHHHHhc---cC-CEE-EEEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECCCC-HHHHHHHHHHhCCCCC
Confidence 356777775 33 344 4666 9999999999988764 478999999987 5433 045678899
Q ss_pred CEEEEEeCCC
Q 012424 431 PTILFFPKHS 440 (464)
Q Consensus 431 PTi~lf~~g~ 440 (464)
|++ |.+|+
T Consensus 72 P~i--fi~g~ 79 (109)
T 1wik_A 72 PQL--YVRGD 79 (109)
T ss_dssp CEE--ECSSS
T ss_pred CEE--EECCE
Confidence 985 55666
No 302
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=97.48 E-value=0.00019 Score=69.55 Aligned_cols=161 Identities=12% Similarity=0.070 Sum_probs=83.6
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc-------CCCeEEEEEeCCCCcHHHHHHHHHHHHHhC-CcEEEE
Q 012424 101 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-------GRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYM 170 (464)
Q Consensus 101 ~eil~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~~-------~~~i~vv~~DTg~~fpeT~~~~~~~~~~~g-l~i~~~ 170 (464)
...|+..+.+.| ..++|++|||.||+++ .|+.+. +.+..++.+-.-+..+...+-++++++.+| ++.+++
T Consensus 34 v~~L~d~l~~~g~~~vvvglSGGiDSal~a~La~~A~daLG~~~~~~~viav~~p~~~~~~~~dA~~~a~~lg~i~~~~i 113 (285)
T 3dpi_A 34 IGFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRADETLTV 113 (285)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSCC---CHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEccCChhHHHHHHHHHHHHHHhcccCcccEEEEEEcCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 455566666655 5699999999999877 554442 322234433333444566778899999998 676665
Q ss_pred c--CChHHHHHHHHhcCCCCCCC--cchhhhh--hccccchHHHHhccCcEEEEee-eccCCcccccCCceeecCCCCcC
Q 012424 171 F--PDAVEVQALVRSKGLFSFYE--DGHQECC--RVRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPVVQVDPVFEG 243 (464)
Q Consensus 171 ~--p~~~~~~~~~~~~g~~~~~~--~~~~~Cc--~~~Kv~Pl~r~l~~~~~~itG~-R~~ES~~~R~~~~~~~~d~~~~~ 243 (464)
. +....+...+...|...-.. .+...|. ...+..-+..+-......+.|+ .+.|. . +.+-..+.
T Consensus 114 ~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~NiqaR~Rm~~L~~~A~~~g~lVlgTgn~sE~-------~-~Gy~T~~G- 184 (285)
T 3dpi_A 114 DVKPAADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAES-------V-MGFFTKFG- 184 (285)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHH-------H-HHHHHCCC-
T ss_pred EChHHHHHHHHHHHhcCccccccCCCchhhhhHHHHHHHHHHHHHHHHCCCEEEeCccHHhh-------h-CCcccccC-
Confidence 2 22222333333334321000 1112232 2223333333333445555554 22221 0 00000010
Q ss_pred ccCCCCCeEEEEeCccCcHHHHHHHHHhcCCC
Q 012424 244 LEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 244 ~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp 275 (464)
+ +..-++||.+.+..||+...+..|+|
T Consensus 185 -D----~~~~~~Pl~~l~K~eV~~la~~lg~p 211 (285)
T 3dpi_A 185 -D----GGADVLPLAGLTKRRVRALARMLGAD 211 (285)
T ss_dssp -C----CCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred -C----CceeEeeecCCcHHHHHHHHHHcCCC
Confidence 1 11248999999999999999998875
No 303
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.00022 Score=66.34 Aligned_cols=93 Identities=13% Similarity=0.208 Sum_probs=70.3
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++.+|++|| +.||+.|....+.|.+..++|+..++.++.|.+|.. +.+++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~va- 129 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLS- 129 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHH-
Confidence 4788999999 999999999999999999999877899999987641 14678
Q ss_pred HcCCCC------CCCEEEEEeCCCC-Ceee-cC-CCCCCHHHHHHHHHHhC
Q 012424 423 QKLQLG------SFPTILFFPKHSS-KPIK-YP-SERRDVDSLMAFVDALR 464 (464)
Q Consensus 423 ~~~~I~------~~PTi~lf~~g~~-~~~~-y~-gg~~~~e~L~~fI~~l~ 464 (464)
+.|+|- .++.+++++..+. +.+. |. .-.++.+++.+.|+.||
T Consensus 130 k~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~AlQ 180 (216)
T 3sbc_A 130 RDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQ 180 (216)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHhh
Confidence 788873 3567777755443 2222 22 11389999999998874
No 304
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=97.47 E-value=0.00014 Score=70.31 Aligned_cols=159 Identities=11% Similarity=0.120 Sum_probs=85.5
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc-----------CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-c
Q 012424 101 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-----------GRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-R 166 (464)
Q Consensus 101 ~eil~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~~-----------~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl-~ 166 (464)
...|+..+++.+ ..++|++|||.||+++ .|+.+. +..+..++++.|. .+..+.++++++.+|+ +
T Consensus 28 v~~L~d~l~~~g~~~vvvglSGGvDSal~a~l~~~A~~~Lg~~~~~~~~~v~av~~p~~~--~~~~~~A~~~a~~lgi~~ 105 (279)
T 3q4g_A 28 VAFIKRKLTEARYKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGE--QKDEDEAQLALSFIRPTH 105 (279)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEECCSSS--CSCHHHHHHHHHHHCCSE
T ss_pred HHHHHHHHHHcCCCCEEEEccCCHHHHHHHHHHHHHHHHhCcccccCCceEEEEEecCCC--hHHHHHHHHHHHHhCCCe
Confidence 345555566655 5699999999999877 554432 3356677777553 3457889999999999 6
Q ss_pred EEEEc--CChHHHHH----HHHhcCCC--CCCCcchhhhh--hccccchHHHHhccCcEEEEee-eccCCcccccCCcee
Q 012424 167 IEYMF--PDAVEVQA----LVRSKGLF--SFYEDGHQECC--RVRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPVV 235 (464)
Q Consensus 167 i~~~~--p~~~~~~~----~~~~~g~~--~~~~~~~~~Cc--~~~Kv~Pl~r~l~~~~~~itG~-R~~ES~~~R~~~~~~ 235 (464)
.+++. +....+.. .+...+.. .....+...|. ...+..-|-..-......+.|+ .++|.. .
T Consensus 106 ~~~i~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~NiqaR~R~~~Ly~~A~~~g~lVlgTgn~sE~~--------~ 177 (279)
T 3q4g_A 106 SVSVNIKAGVDGLHAASHHALANTGLIPSDPAKVDFIKGNVKARARMVAQYEIAGYVGGLVLGTDHSAENI--------T 177 (279)
T ss_dssp EEECCCHHHHHHHHHHHHHHHHHHTCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCCCHHHHH--------H
T ss_pred EEEEECHHHHHHHHHHHHHHhhhhcccccCCCcccchhhhHHHHHHHHHHHHHHHHCCCEEecCccHHhhh--------c
Confidence 65542 22222211 12222211 00111111232 2222222322222334555554 333321 1
Q ss_pred ecCCCCcCccCCCCCeEEEEeCccCcHHHHHHHHHhcCCC
Q 012424 236 QVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 236 ~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp 275 (464)
.+-..|. + +-.-++||.+.+..+|++..+..|+|
T Consensus 178 Gy~TkyG--D----~~~di~Pl~dl~Kt~Vr~LA~~lgiP 211 (279)
T 3q4g_A 178 GFYTKFG--D----GACDLAPLFGLNKRQVRLLAKTLGAP 211 (279)
T ss_dssp TCSCTTT--T----TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred cchhhcC--C----cccceeecCCCcHHHHHHHHHHhCCc
Confidence 1111110 1 11248999999999999999999875
No 305
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.46 E-value=9.3e-05 Score=63.22 Aligned_cols=70 Identities=16% Similarity=0.282 Sum_probs=47.4
Q ss_pred cchHHHHHhhcCCCCcEEEEEecCCChhHHhh-HHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHcCCCCCCC
Q 012424 359 RTGMENLARLDHRQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFP 431 (464)
Q Consensus 359 ~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~-~p~~~~la~~~~~~~v~~~~Id~d~~~------~~l~~~~~~I~~~P 431 (464)
.+.+++++. .++ ++.|+.+|||+|+.+ ++.|.++... .+.+..+|++.+. .++. +.++..++|
T Consensus 27 ~~~v~~~i~---~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----~i~~~~vdvd~~~~~~~~~~~L~-~~~g~~tVP 96 (129)
T 3ctg_A 27 VAHVKDLIG---QKE--VFVAAKTYCPYCKATLSTLFQELNVP----KSKALVLELDEMSNGSEIQDALE-EISGQKTVP 96 (129)
T ss_dssp HHHHHHHHH---HSS--EEEEECTTCHHHHHHHHHHHTTSCCC----GGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSC
T ss_pred HHHHHHHHc---CCC--EEEEECCCCCchHHHHHHHHHhcCcc----CCCcEEEEccccCCHHHHHHHHH-HHhCCCCCC
Confidence 345666664 333 678999999999999 8777764311 2556666666541 3566 788999999
Q ss_pred EEEEEeCCC
Q 012424 432 TILFFPKHS 440 (464)
Q Consensus 432 Ti~lf~~g~ 440 (464)
++ |.+|+
T Consensus 97 ~v--fi~g~ 103 (129)
T 3ctg_A 97 NV--YINGK 103 (129)
T ss_dssp EE--EETTE
T ss_pred EE--EECCE
Confidence 96 45665
No 306
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=97.46 E-value=0.00018 Score=69.43 Aligned_cols=156 Identities=13% Similarity=0.086 Sum_probs=83.8
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHcC---------CCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEE
Q 012424 101 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTG---------RPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIE 168 (464)
Q Consensus 101 ~eil~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~~~---------~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl-~i~ 168 (464)
...|+..+++.+ ..++|++|||-||+++ .|+.+.. ..+..++++.|.. ...+.++++++++|+ +.+
T Consensus 26 ~~~L~d~v~~~g~~~vvvgLSGGvDSsv~a~La~~a~~~lg~~~~~~~v~av~~~~~~~--~d~~~A~~va~~lgi~~~~ 103 (271)
T 1kqp_A 26 VNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQ--QDEDDAQLALKFIKPDKSW 103 (271)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSC--TTHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEeCCCCC--CCHHHHHHHHHhcCCCeEE
Confidence 445666665544 4699999999999776 6666532 3566677776543 347889999999998 666
Q ss_pred EEc--CChHHHHHHHHh-cCCCCCCCcchhhhhh--ccccchHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCC
Q 012424 169 YMF--PDAVEVQALVRS-KGLFSFYEDGHQECCR--VRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVF 241 (464)
Q Consensus 169 ~~~--p~~~~~~~~~~~-~g~~~~~~~~~~~Cc~--~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~ 241 (464)
++. +....+...+.. .|.+ ..+...|.. ..+...+...-. +..++-||. .+|.. ........|
T Consensus 104 ~i~i~~~~~~~~~~l~~~~~~~---~~~~~~~N~~aR~r~~~l~~~A~~~g~lvl~tgn-~~E~~---~Gy~t~~gd--- 173 (271)
T 1kqp_A 104 KFDIKSTVSAFSDQYQQETGDQ---LTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDH-AAEAV---TGFFTKYGD--- 173 (271)
T ss_dssp ECCCHHHHHHHHHHHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCC-HHHHT---TTCSCTTTT---
T ss_pred EeccHHHHHHHHHHHhhhcCCC---CcchhhhhHHHHHHHHHHHHHHHHCCCEEEECcc-HHHhc---cCCcccccc---
Confidence 542 211222222221 1321 112112211 111222221111 322333333 34421 111100001
Q ss_pred cCccCCCCCeEEEEeCccCcHHHHHHHHHhcCCCc
Q 012424 242 EGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPI 276 (464)
Q Consensus 242 ~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~ 276 (464)
+.--++||.+++..||+...+..|+|.
T Consensus 174 --------~~~~~~Pl~~l~K~eVr~la~~lglp~ 200 (271)
T 1kqp_A 174 --------GGADLLPLTGLTKRQGRTLLKELGAPE 200 (271)
T ss_dssp --------TCCSBCTTTTCCHHHHHHHHHHTTCCT
T ss_pred --------ccccccccccCCHHHHHHHHHHcCCCH
Confidence 112378999999999999999999973
No 307
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.46 E-value=0.00036 Score=65.35 Aligned_cols=87 Identities=10% Similarity=0.112 Sum_probs=62.3
Q ss_pred CCCcEEEEEecCC-ChhHH-----hhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHH
Q 012424 371 RQEPWLVVLYAPW-CQFCQ-----AMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fya~w-C~~C~-----~~~p~~~~la~~~~~~~v~~~~Id~d~~----------------------~~~l~~ 422 (464)
.++++||+||+.| |++|. ...+.|.++ +. ++.|+.|+.|.. +.+++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~va- 120 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFH- 120 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHH-
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHH-
Confidence 4789999999988 99999 888888777 53 588888876531 14677
Q ss_pred HcCCCCC---------CCEEEEEe-CCCCCeeecC---CCCCCHHHHHHHHHHh
Q 012424 423 QKLQLGS---------FPTILFFP-KHSSKPIKYP---SERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~~---------~PTi~lf~-~g~~~~~~y~---gg~~~~e~L~~fI~~l 463 (464)
+.|+|.. .|+++++. +|........ .+..+.+++.+.|+++
T Consensus 121 k~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l 174 (224)
T 3keb_A 121 KRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEG 174 (224)
T ss_dssp HHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHh
Confidence 7888864 79999996 4442211111 1246789999888765
No 308
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.42 E-value=0.00015 Score=66.20 Aligned_cols=43 Identities=9% Similarity=0.205 Sum_probs=38.9
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 414 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d 414 (464)
.++++||.|+++|||+|+.+.|.+.++.+.+.+ ++.|..+.+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 468899999999999999999999999999887 7999888864
No 309
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.39 E-value=0.00018 Score=59.83 Aligned_cols=66 Identities=15% Similarity=0.324 Sum_probs=46.0
Q ss_pred chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--c----HHHHHHcCCCCCCCEE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--Q----KEYAKQKLQLGSFPTI 433 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--~----~~l~~~~~~I~~~PTi 433 (464)
+.++++++ .++ ++.|+++|||+|+...+.|.++ ++.+-.+|++.. . ..+. +..+..++|++
T Consensus 8 ~~~~~~i~---~~~--v~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd~~~~~~~~~~~l~-~~~g~~tvP~v 74 (114)
T 3h8q_A 8 RHLVGLIE---RSR--VVIFSKSYCPHSTRVKELFSSL-------GVECNVLELDQVDDGARVQEVLS-EITNQKTVPNI 74 (114)
T ss_dssp HHHHHHHH---HCS--EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTSTTHHHHHHHHH-HHHSCCSSCEE
T ss_pred HHHHHHhc---cCC--EEEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEecCCCChHHHHHHHH-HHhCCCccCEE
Confidence 45666664 333 4449999999999999988874 366777777753 1 1244 56788999998
Q ss_pred EEEeCCC
Q 012424 434 LFFPKHS 440 (464)
Q Consensus 434 ~lf~~g~ 440 (464)
++ +|+
T Consensus 75 fi--~g~ 79 (114)
T 3h8q_A 75 FV--NKV 79 (114)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 65 665
No 310
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=97.30 E-value=0.001 Score=64.24 Aligned_cols=155 Identities=10% Similarity=0.133 Sum_probs=83.3
Q ss_pred HHHHHHHHHHcC--CcEEEEechhHHHHHH-HHHHHcC-----------CCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-
Q 012424 101 LEIMDRALEKFG--NDIAIAFSGAEDVALI-EYAHLTG-----------RPFRVFSLDTGRLNPETYRFFDEVEKHFGI- 165 (464)
Q Consensus 101 ~eil~~a~~~~~--~~i~vafSGGKDS~ll-~L~~~~~-----------~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl- 165 (464)
...|+..+.+.+ .+++|++|||-||+++ .|+.+.. .++..++++.+. +...+.++++++.+|+
T Consensus 27 ~~~L~~~l~~~g~~~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~--~~~~~dA~~va~~lgi~ 104 (275)
T 1wxi_A 27 VDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGV--QADEQDCQDAIAFIQPD 104 (275)
T ss_dssp HHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSS--CTTHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCCCCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCC--ccCHHHHHHHHHHcCCC
Confidence 455566666544 4599999999999776 5665531 256677777653 3357889999999998
Q ss_pred cEEEEc--CChHHHHHHHHhcCCCCCCCcchhhhhh--ccccchHHHHhccCc--EEEEeeeccCCcccccCCceeecCC
Q 012424 166 RIEYMF--PDAVEVQALVRSKGLFSFYEDGHQECCR--VRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVDP 239 (464)
Q Consensus 166 ~i~~~~--p~~~~~~~~~~~~g~~~~~~~~~~~Cc~--~~Kv~Pl~r~l~~~~--~~itG~R~~ES~~~R~~~~~~~~d~ 239 (464)
+.+++. +....+...+...|.+ ..+...|.. ..+...+-..-.... ++-||.. +|.. .... .
T Consensus 105 ~~~~i~i~~~~~~~~~~l~~~g~~---~~~~~~~N~~aR~r~~~l~~~A~~~g~lvlgTgn~-~E~~---~Gy~-----t 172 (275)
T 1wxi_A 105 RVLTVNIKGAVLASEQALREAGIE---LSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHA-AEAI---TGFF-----T 172 (275)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCC---CCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCH-HHHT---TTCS-----C
T ss_pred eEEEEecHHHHHHHHHHHHhcCCC---CCCchhhhhhhhHHHHHHHHHHHHCCCEEEECccH-HHHc---cCcc-----c
Confidence 665542 2112222222222321 111112211 111122222222223 3333432 2221 1110 0
Q ss_pred CCcCccCCCCCeEEEEeCccCcHHHHHHHHHhcCCC
Q 012424 240 VFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 240 ~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp 275 (464)
.+. + +.--+.||.+++..||+...+..|+|
T Consensus 173 ~~g--d----~~~~~~PL~~l~K~eVr~la~~lglp 202 (275)
T 1wxi_A 173 KYG--D----GGTDINPLYRLNKRQGKQLLAALACP 202 (275)
T ss_dssp TTT--T----TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred ccC--C----CccceeeccCCCHHHHHHHHHHhCCc
Confidence 010 0 11238999999999999999999987
No 311
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.15 E-value=0.00092 Score=60.17 Aligned_cols=99 Identities=15% Similarity=0.241 Sum_probs=62.6
Q ss_pred hHHHHHhhcCCCCcEEEEEecCCChhHHh-hHHHHHHHHHHhcCCCe-EEEEEEcCCC----------------------
Q 012424 361 GMENLARLDHRQEPWLVVLYAPWCQFCQA-MEGSYVELADKLAGNGV-KVGKFRADGD---------------------- 416 (464)
Q Consensus 361 ~f~~~i~~~~~~k~vlV~Fya~wC~~C~~-~~p~~~~la~~~~~~~v-~~~~Id~d~~---------------------- 416 (464)
++.++++ .+..||+.|++.|||.|.. ..|.|.+..++|+..++ .++.|.+|..
T Consensus 40 sLsd~~~---Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l~~~f~lLsD~ 116 (176)
T 4f82_A 40 SVRDQVA---GKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLHTAGKVRMMADG 116 (176)
T ss_dssp EHHHHHT---TCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTTSEEEECT
T ss_pred eHHHHhC---CCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhCCCCCceEEEcC
Confidence 4555543 2335566677999999999 99999999999976678 8888877541
Q ss_pred cHHHHHHcCCCC-----------CCCEEEEEeCCCCCeeec-CCCCCCHHHHHHHHHHh
Q 012424 417 QKEYAKQKLQLG-----------SFPTILFFPKHSSKPIKY-PSERRDVDSLMAFVDAL 463 (464)
Q Consensus 417 ~~~l~~~~~~I~-----------~~PTi~lf~~g~~~~~~y-~gg~~~~e~L~~fI~~l 463 (464)
+.+++ +.|++. +.++.+++++|+.+.+.. ..+.++..+..+.|+.|
T Consensus 117 ~~~va-~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~~~~~~~~~a~~vL~~L 174 (176)
T 4f82_A 117 SAAFT-HALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEAPGKFEVSDAASVLATL 174 (176)
T ss_dssp TCHHH-HHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECCTTCCSSSSHHHHHHTC
T ss_pred chHHH-HHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcCCCCcchhhHHHHHHHh
Confidence 13577 677662 247666667776432222 12233444444444444
No 312
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=97.12 E-value=0.00091 Score=63.02 Aligned_cols=123 Identities=17% Similarity=0.232 Sum_probs=74.0
Q ss_pred cEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcH------HHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCC
Q 012424 114 DIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNP------ETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGL 186 (464)
Q Consensus 114 ~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fp------eT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~ 186 (464)
++++++||||||++. +++.+.+.++..++...+.... .-.+.++++++.+|+++.++.-...
T Consensus 6 Kvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~----------- 74 (237)
T 3rjz_A 6 DVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGE----------- 74 (237)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------------
T ss_pred EEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCC-----------
Confidence 589999999999766 7777777776655444432210 1146788899999999887642211
Q ss_pred CCCCCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCcccccCCceeecCCCCcCccCCCCCeEEEEeCccCcHHH
Q 012424 187 FSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGND 264 (464)
Q Consensus 187 ~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~~~R~~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~D 264 (464)
.-..++.|.++++ +.++.++|--..+. .|.....+-.. -++.-+.||......+
T Consensus 75 ------------~~~e~e~l~~~l~~~~i~~vv~Gdi~s~y--qr~r~e~vc~~----------~gl~~~~PLW~~d~~~ 130 (237)
T 3rjz_A 75 ------------KEKEVEDLKRVLSGLKIQGIVAGALASKY--QRKRIEKVAKE----------LGLEVYTPAWGRDAKE 130 (237)
T ss_dssp ---------------CHHHHHHHHTTSCCSEEECC---CCS--HHHHHHHHHHH----------TTCEEECSSSSCCHHH
T ss_pred ------------chHHHHHHHHHHHhcCCcEEEECCcchHH--HHHHHHHHHHH----------cCCEEEccccCCCHHH
Confidence 0112456667776 45688888877665 33333221111 1467789999998887
Q ss_pred HHHHHHh
Q 012424 265 IWNFLRT 271 (464)
Q Consensus 265 Vw~yi~~ 271 (464)
+..-+..
T Consensus 131 Ll~e~i~ 137 (237)
T 3rjz_A 131 YMRELLN 137 (237)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655444
No 313
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.11 E-value=0.0021 Score=60.80 Aligned_cols=102 Identities=10% Similarity=0.101 Sum_probs=76.0
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecCCCh---h-HHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHcCC
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ---F-CQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQ 426 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~---~-C~~~~p~~~~la~~~~~--~~v~~~~Id~d~~~~~l~~~~~~ 426 (464)
.|.++|.+++..+. +.+++|.|+..-+. . ...+...+.++|+++.+ ..+.|+.+|.+.. ..+. +.|+
T Consensus 115 lv~e~t~~n~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~-~~~~-~~fg 187 (252)
T 2h8l_A 115 ICPHMTEDNKDLIQ-----GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF-SHEL-SDFG 187 (252)
T ss_dssp SSCEECTTTHHHHS-----SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT-HHHH-GGGT
T ss_pred CeeecccccHhhhc-----CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHH-HHHH-HHcC
Confidence 58889999988852 35667777754332 1 22577888899999986 2499999999988 7788 8999
Q ss_pred C----CCCCEEEEEeCCCCCeeecCCCCCCHHH--HHHHHHHh
Q 012424 427 L----GSFPTILFFPKHSSKPIKYPSERRDVDS--LMAFVDAL 463 (464)
Q Consensus 427 I----~~~PTi~lf~~g~~~~~~y~gg~~~~e~--L~~fI~~l 463 (464)
+ ..+|.+.++..... .+.+.+ ..+.+. |.+|++.+
T Consensus 188 l~~~~~~~P~v~i~~~~~~-ky~~~~-~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 188 LESTAGEIPVVAIRTAKGE-KFVMQE-EFSRDGKALERFLQDY 228 (252)
T ss_dssp CCCCSCSSCEEEEECTTSC-EEECCS-CCCTTSHHHHHHHHHH
T ss_pred CCCccCCCCEEEEEeCcCc-EecCCc-ccCcchHHHHHHHHHH
Confidence 9 36999999954332 455654 678888 99999875
No 314
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.11 E-value=0.0002 Score=64.98 Aligned_cols=43 Identities=19% Similarity=0.411 Sum_probs=36.5
Q ss_pred CCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEcCC
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADG 415 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~d~ 415 (464)
.+++||.||+.|||+|+.+.|.+ .++.+.+.+ ++.|..+++.-
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEechh
Confidence 47899999999999999999987 688888876 68888887653
No 315
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=96.92 E-value=0.0044 Score=57.66 Aligned_cols=93 Identities=11% Similarity=0.210 Sum_probs=68.8
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 422 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~---------------------------~~~l~~ 422 (464)
.++.+|++|| +.||+.|......|.++.++|...++.++.|.+|.. +.+++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va- 133 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIA- 133 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHH-
Confidence 4688999999 999999999999999999999887899999987642 14678
Q ss_pred HcCCCC----CC--CEEEEEe-CCCCCeee-cC-CCCCCHHHHHHHHHHhC
Q 012424 423 QKLQLG----SF--PTILFFP-KHSSKPIK-YP-SERRDVDSLMAFVDALR 464 (464)
Q Consensus 423 ~~~~I~----~~--PTi~lf~-~g~~~~~~-y~-gg~~~~e~L~~fI~~l~ 464 (464)
+.|++- ++ -.++++. +|..+.+. +. .-.++.+++.+.|++||
T Consensus 134 ~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ 184 (219)
T 3tue_A 134 RSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQ 184 (219)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHhh
Confidence 788873 23 3556664 44322222 22 12479999999998874
No 316
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=96.90 E-value=0.0095 Score=56.25 Aligned_cols=102 Identities=17% Similarity=0.168 Sum_probs=76.1
Q ss_pred CeeecCcchHHHHHhhcCCCCcEEEEEecC-CC---h-hHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCC
Q 012424 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAP-WC---Q-FCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL 427 (464)
Q Consensus 353 ~v~~L~~~~f~~~i~~~~~~k~vlV~Fya~-wC---~-~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I 427 (464)
-|.+++.+++..+. .+++.++.|+.+ .+ . ....+...+.++|++++ ++.|+.+|.+.. .... +.|++
T Consensus 117 lv~e~t~~n~~~~~----~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--ki~F~~~d~~~~-~~~l-~~fgl 188 (250)
T 3ec3_A 117 LVGHRKTSNDAKRY----SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--EYTFAIADEEDY-ATEV-KDLGL 188 (250)
T ss_dssp TEEEECTTTHHHHS----CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--TSEEEEEETTTT-HHHH-HHTTC
T ss_pred ceeecCccchhhhh----ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--ceeEEEEcHHHH-HHHH-HHcCC
Confidence 58889999988765 367777777753 33 3 34567889999999998 599999999988 7778 79998
Q ss_pred CC--C-CEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 428 GS--F-PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 ~~--~-PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
.. + |.++++.... ..+.+..+..+.++|.+|++.+
T Consensus 189 ~~~~~~p~~~~~~~~~-~ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 189 SESGGDVNAAILDESG-KKFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp SSCSCSCEEEEECTTS-CEEECCCCSCCHHHHHHHHHHH
T ss_pred CccCCCcEEEEEcCCC-ceecCCcccCCHHHHHHHHHHH
Confidence 63 4 4777665433 2455553468999999999875
No 317
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.80 E-value=0.003 Score=62.30 Aligned_cols=88 Identities=6% Similarity=0.009 Sum_probs=61.3
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHcCCC--
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQL-- 427 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--------------------~~~l~~~~~~I-- 427 (464)
.+|++||+|| +.||+.|....+.|.+ ....++.++.|+.|.. +.+++ +.|+|
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~-~~ygv~~ 97 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILH-EFFNVLE 97 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHH-HHTTCEE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHH-HhcCCCC
Confidence 5789999999 6799999988877754 1223688888887542 14688 89998
Q ss_pred --CCCCEEEEEeCCCCCeeecCC--CCCCHHHHHHHHHHh
Q 012424 428 --GSFPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 463 (464)
Q Consensus 428 --~~~PTi~lf~~g~~~~~~y~g--g~~~~e~L~~fI~~l 463 (464)
..+|+.++++..+.....+.+ -....+++.++++++
T Consensus 98 ~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 98 NGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp TTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 357899888655532222222 134688898888876
No 318
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.72 E-value=0.0016 Score=55.98 Aligned_cols=67 Identities=12% Similarity=0.236 Sum_probs=45.5
Q ss_pred chHHHHHhhcCCCCcEEEEEec----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---HcCCCCCCCE
Q 012424 360 TGMENLARLDHRQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFPT 432 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~---~~~~I~~~PT 432 (464)
+.+++++. ...++|+.++ +||++|++.+..|.++ ++.|..+|++.+ +++.. +..+..++|.
T Consensus 26 ~~v~~~i~----~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~~d-~~~~~~L~~~~G~~tvP~ 93 (135)
T 2wci_A 26 EKIQRQIA----ENPILLYMKGSPKLPSCGFSAQAVQALAAC-------GERFAYVDILQN-PDIRAELPKYANWPTFPQ 93 (135)
T ss_dssp HHHHHHHH----HCSEEEEESBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGGGC-HHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHhc----cCCEEEEEEecCCCCCCccHHHHHHHHHHc-------CCceEEEECCCC-HHHHHHHHHHHCCCCcCE
Confidence 44555554 3456665554 9999999999888654 477889999877 54430 3447788998
Q ss_pred EEEEeCCC
Q 012424 433 ILFFPKHS 440 (464)
Q Consensus 433 i~lf~~g~ 440 (464)
++ -+|+
T Consensus 94 Vf--I~G~ 99 (135)
T 2wci_A 94 LW--VDGE 99 (135)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 64 4665
No 319
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.0016 Score=55.42 Aligned_cols=69 Identities=10% Similarity=0.104 Sum_probs=43.8
Q ss_pred chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC--CcH---H-HHHHcCCCCCCCEE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQK---E-YAKQKLQLGSFPTI 433 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~--~~~---~-l~~~~~~I~~~PTi 433 (464)
++|++++. .++ ++.|..+|||+|+..+..|.+. +.- ++.+..+|++. +.. + +. +..+..++|++
T Consensus 5 ~~~~~ii~---~~~--Vvvysk~~Cp~C~~ak~lL~~~---~~~-~v~~~~idid~~~d~~~~~~~l~-~~~G~~tVP~I 74 (127)
T 3l4n_A 5 KEYSLILD---LSP--IIIFSKSTCSYSKGMKELLENE---YQF-IPNYYIIELDKHGHGEELQEYIK-LVTGRGTVPNL 74 (127)
T ss_dssp HHHHHHHT---SCS--EEEEECTTCHHHHHHHHHHHHH---EEE-ESCCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEE
T ss_pred HHHHHHHc---cCC--EEEEEcCCCccHHHHHHHHHHh---ccc-CCCcEEEEecCCCCHHHHHHHHH-HHcCCCCcceE
Confidence 46777775 333 7789999999999999888773 110 23445555553 311 2 32 34577899998
Q ss_pred EEEeCCC
Q 012424 434 LFFPKHS 440 (464)
Q Consensus 434 ~lf~~g~ 440 (464)
++ +|+
T Consensus 75 fI--~G~ 79 (127)
T 3l4n_A 75 LV--NGV 79 (127)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 53 554
No 320
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.65 E-value=0.001 Score=60.18 Aligned_cols=39 Identities=21% Similarity=0.403 Sum_probs=33.9
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 413 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~ 413 (464)
++++||.|+..|||||+.+.|.+.++.+.+ + +.|.++.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--TDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--SCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--CeEEEEec
Confidence 578999999999999999999999999998 4 66666653
No 321
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=96.62 E-value=0.0038 Score=61.20 Aligned_cols=117 Identities=9% Similarity=-0.019 Sum_probs=76.5
Q ss_pred cEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHh-------CCcEEEEcCChHHHHHHHHhcC
Q 012424 114 DIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-------GIRIEYMFPDAVEVQALVRSKG 185 (464)
Q Consensus 114 ~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~-------gl~i~~~~p~~~~~~~~~~~~g 185 (464)
++++++|| .||.++ +|+.+.|.++..+|++++. ...+.++++++.+ +++++++.+ ..+..
T Consensus 181 kvlvllSG-vDS~vaa~ll~~~G~~v~~v~~~~~~---~~~~~a~~~a~~l~~~~~~~~i~~~vv~~-~~~~~------- 248 (307)
T 1vbk_A 181 RMIGILHD-ELSALAIFLMMKRGVEVIPVYIGKDD---KNLEKVRSLWNLLKRYSYGSKGFLVVAES-FDRVL------- 248 (307)
T ss_dssp EEEEECSS-HHHHHHHHHHHHBTCEEEEEEESCSS---HHHHHHHHHHHHHHTTCTTSCCCCEEESS-HHHHH-------
T ss_pred cEEEEEeC-CcHHHHHHHHHhCCCeEEEEEEEECH---HHHHHHHHHHHHHhhhccCCCCcEEEeCC-CHHHH-------
Confidence 58999999 998766 8888899999999999553 4567788888888 666666521 11111
Q ss_pred CCCCCCcchhhhhhccccchHHHHh-ccCcEEEEeeeccCCcccccCCceee-cCCCCcCccCCCCCeEEEEeCccCcHH
Q 012424 186 LFSFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSPGTRSEIPVVQ-VDPVFEGLEGGVGSLVKWNPVANVKGN 263 (464)
Q Consensus 186 ~~~~~~~~~~~Cc~~~Kv~Pl~r~l-~~~~~~itG~R~~ES~~~R~~~~~~~-~d~~~~~~~~~~~~~~k~~PI~dWt~~ 263 (464)
.-+. .+.+.++||....|-. -..+. +. .+.. ....-+.||.+++..
T Consensus 249 ---------------------~~A~~~ga~~I~tG~~~~~~~--~qt~~-l~~~~~~--------~~~~vl~PL~~~~K~ 296 (307)
T 1vbk_A 249 ---------------------KLIRDFGVKGVIKGLRPNDLN--SEVSE-ITEDFKM--------FPVPVYYPLIALPEE 296 (307)
T ss_dssp ---------------------HHHHHHTCCEEECCCCGGGCC--TTCHH-HHHHHHH--------CSSCEECHHHHSCHH
T ss_pred ---------------------HHHHHcCCCEEEECcccchhc--cccHH-HhhhccC--------cCCeEEEccCCCCHH
Confidence 1111 2667899998765421 01111 11 1100 012347899999999
Q ss_pred HHHHHHHhcCC
Q 012424 264 DIWNFLRTMDV 274 (464)
Q Consensus 264 DVw~yi~~~~l 274 (464)
||.++.++.|+
T Consensus 297 eI~~~a~~iGl 307 (307)
T 1vbk_A 297 YIKSVKERLGL 307 (307)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 99999988764
No 322
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.47 E-value=0.0043 Score=50.95 Aligned_cols=59 Identities=15% Similarity=0.244 Sum_probs=39.9
Q ss_pred CCcEEEEEec----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH---HHcCCCCCCCEEEEEeCCC
Q 012424 372 QEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA---KQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 372 ~k~vlV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~---~~~~~I~~~PTi~lf~~g~ 440 (464)
...|+|+-.. |||++|+..+..|.+. ++.+-.+|++.+ +++. ++..+...+|.++ -+|+
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~-------gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~if--i~g~ 82 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNL-------NVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLY--IGGE 82 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEE--ETTE
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEE--ECCE
Confidence 4455554333 5999999999888764 477888898877 4433 0334778999764 4665
No 323
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.40 E-value=0.028 Score=51.33 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=33.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHH-HHHHHHhcC-CCeEEEEEEc
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFRA 413 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~Id~ 413 (464)
..+.+||.|+...||+|+.+.+.+ ..|.+.|.+ .+|.|...+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 457889999999999999999886 567777743 3688877653
No 324
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.39 E-value=0.016 Score=56.26 Aligned_cols=100 Identities=11% Similarity=0.149 Sum_probs=69.9
Q ss_pred CeeecC-cchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH-HHcCC----
Q 012424 353 NLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA-KQKLQ---- 426 (464)
Q Consensus 353 ~v~~L~-~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~-~~~~~---- 426 (464)
.+..++ .+++++++. ..+++.+|.| ..- ....+.|.+++..+.+ .+.|+.++-.+. ..+. .++|+
T Consensus 144 ~v~~i~~~~~l~~~l~--~~~~~~vi~f-s~~----~~~~~~f~~~A~~~~~-~~~F~~v~~~~~-a~~~~~~~~~~~~p 214 (298)
T 3ed3_A 144 YVKKFVRIDTLGSLLR--KSPKLSVVLF-SKQ----DKISPVYKSIALDWLG-KFDFYSISNKKL-KQLTDMNPTYEKTP 214 (298)
T ss_dssp CEEECSCGGGHHHHHT--SCSSEEEEEE-ESS----SSCCHHHHHHHHHTBT-TEEEEEEEGGGC-CCCCTTCTTSTTCH
T ss_pred ccEEcCCHHHHHHHHh--cCCceEEEEE-cCC----CcchHHHHHHHHHhhc-CcEEEEEcchHh-hhhhhhhhhcccCc
Confidence 566674 477988876 2246666666 332 2345789999999988 799999985533 1000 00111
Q ss_pred -C-------------CCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 012424 427 -L-------------GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 461 (464)
Q Consensus 427 -I-------------~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~ 461 (464)
| ..+|++++|+....+++.|.|+..+.++|.+||.
T Consensus 215 ~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~ 263 (298)
T 3ed3_A 215 EIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLR 263 (298)
T ss_dssp HHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHH
T ss_pred chhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHH
Confidence 2 6799999998766569999976799999999997
No 325
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=96.37 E-value=0.013 Score=63.02 Aligned_cols=64 Identities=16% Similarity=0.141 Sum_probs=48.6
Q ss_pred HHHcC-CcEEEEechhHHHHHH-HH--------HHHcCCC---------------------------------eEEEEEe
Q 012424 108 LEKFG-NDIAIAFSGAEDVALI-EY--------AHLTGRP---------------------------------FRVFSLD 144 (464)
Q Consensus 108 ~~~~~-~~i~vafSGGKDS~ll-~L--------~~~~~~~---------------------------------i~vv~~D 144 (464)
+++.+ .+++|++|||-||+++ .| +...+.+ +.-+|+.
T Consensus 298 ~~~~g~~~vvlglSGGvDSsv~A~Lv~~~~~~a~~alG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~m~ 377 (634)
T 3ilv_A 298 MRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQS 377 (634)
T ss_dssp HHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHHHHHHHHHHEEEEEEE
T ss_pred HHHhCCCeEEEEccCCHHHHHHHHHHHHHHHHHHHHhCchhhhhhhhcccccccccccccccccchhHhhhheeeeeecC
Confidence 44444 5699999999999765 33 1234543 6678888
Q ss_pred CCCCcHHHHHHHHHHHHHhCCcEEEEc
Q 012424 145 TGRLNPETYRFFDEVEKHFGIRIEYMF 171 (464)
Q Consensus 145 Tg~~fpeT~~~~~~~~~~~gl~i~~~~ 171 (464)
+...-.++++-++++++.+|++++++.
T Consensus 378 ~~~ss~~~~~dA~~la~~LGi~~~~Id 404 (634)
T 3ilv_A 378 TRNSGDETYTSAKTLAESIGATFYNWS 404 (634)
T ss_dssp CTTCCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEEc
Confidence 877788999999999999999887653
No 326
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=96.29 E-value=0.0089 Score=64.93 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=46.5
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHH----cC---CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEE
Q 012424 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHL----TG---RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYM 170 (464)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~----~~---~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~ 170 (464)
.-|+..+++.+ .+++|++|||.||+++ .|+.+ .+ .++..++++....-+++++.++++++.+|++++++
T Consensus 350 ~~l~~~l~~~g~~~vvvglSGGvDSsvaa~l~~~a~~~lg~~~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i 427 (680)
T 3sdb_A 350 SGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEI 427 (680)
T ss_dssp HHHHHHHHHTTSCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC--------CHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEecCCccHHHHHHHHHHHHHHhCCCCceEEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 44566666666 5699999999999865 34433 23 46888999987777899999999999999997765
No 327
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.26 E-value=0.028 Score=52.36 Aligned_cols=42 Identities=7% Similarity=0.139 Sum_probs=32.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHH-HHHHHHHhcC-CCeEEEEEE
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGS-YVELADKLAG-NGVKVGKFR 412 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~-~~~la~~~~~-~~v~~~~Id 412 (464)
..+.+|+.|+...||+|+.+.+. +.++.++|.+ .+|.|...+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 35678999999999999999996 4788888842 267776654
No 328
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.23 E-value=0.0074 Score=47.07 Aligned_cols=56 Identities=18% Similarity=0.149 Sum_probs=40.2
Q ss_pred EEEEecC----CChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC-----CCc---HHHHHHcCCCC-----CCCEEEEEeC
Q 012424 376 LVVLYAP----WCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----GDQ---KEYAKQKLQLG-----SFPTILFFPK 438 (464)
Q Consensus 376 lV~Fya~----wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d-----~~~---~~l~~~~~~I~-----~~PTi~lf~~ 438 (464)
++.|+.+ ||++|++.+..|++. ++.+-.+|++ .+. .++. +..+.. ++|++++ .+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-------gi~y~~idI~~~~~~~~~~~~~~l~-~~~g~~~~~~~tvP~v~i-~~ 72 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-------KQPFEFINIMPEKGVFDDEKIAELL-TKLGRDTQIGLTMPQVFA-PD 72 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-------TCCEEEEESCSBTTBCCHHHHHHHH-HHHTCSCCTTCCSCEEEC-TT
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-------CCCEEEEEeeccccccCHHHHHHHH-HHhCCCCCCCCccCEEEE-EC
Confidence 5678899 999999999887763 4777888887 441 2345 566777 8998753 35
Q ss_pred CC
Q 012424 439 HS 440 (464)
Q Consensus 439 g~ 440 (464)
|+
T Consensus 73 g~ 74 (87)
T 1aba_A 73 GS 74 (87)
T ss_dssp SC
T ss_pred CE
Confidence 55
No 329
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.18 E-value=0.0081 Score=50.22 Aligned_cols=67 Identities=19% Similarity=0.323 Sum_probs=43.7
Q ss_pred chHHHHHhhcCCCCcEEEEEec----CCChhHHhhHHHHHHHHHHhcCCCeE-EEEEEcCCCcHHHH---HHcCCCCCCC
Q 012424 360 TGMENLARLDHRQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVK-VGKFRADGDQKEYA---KQKLQLGSFP 431 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~-~~~Id~d~~~~~l~---~~~~~I~~~P 431 (464)
+.+++++. ..+|+|+-.. ||||+|+..+..|.++ ++. +..+|++.+ +++. ++..+...+|
T Consensus 11 ~~v~~~i~----~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~vdV~~d-~~~~~~l~~~tg~~tvP 78 (118)
T 2wem_A 11 EQLDALVK----KDKVVVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTIP 78 (118)
T ss_dssp HHHHHHHH----HSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCCEEEESSSC-HHHHHHHHHHHTCCSSC
T ss_pred HHHHHHhc----cCCEEEEEecCCCCCccHHHHHHHHHHHHc-------CCCCCEEEEcCCC-HHHHHHHHHHhCCCCcC
Confidence 34566664 3445554333 5999999999888764 464 788888877 4443 0233678899
Q ss_pred EEEEEeCCC
Q 012424 432 TILFFPKHS 440 (464)
Q Consensus 432 Ti~lf~~g~ 440 (464)
.++ -+|+
T Consensus 79 ~vf--I~g~ 85 (118)
T 2wem_A 79 QVY--LNGE 85 (118)
T ss_dssp EEE--ETTE
T ss_pred eEE--ECCE
Confidence 974 4565
No 330
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.11 E-value=0.011 Score=49.46 Aligned_cols=66 Identities=20% Similarity=0.356 Sum_probs=43.2
Q ss_pred hHHHHHhhcCCCCcEEEEEec----CCChhHHhhHHHHHHHHHHhcCCCeE---EEEEEcCCCcHHHH---HHcCCCCCC
Q 012424 361 GMENLARLDHRQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVK---VGKFRADGDQKEYA---KQKLQLGSF 430 (464)
Q Consensus 361 ~f~~~i~~~~~~k~vlV~Fya----~wC~~C~~~~p~~~~la~~~~~~~v~---~~~Id~d~~~~~l~---~~~~~I~~~ 430 (464)
.++++++ ..+|+|+-.. ||||+|+..+..|.+. ++. |..+|++.+ +++. ++..+-..+
T Consensus 8 ~v~~~i~----~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~~-~~~~~~l~~~sg~~tv 75 (121)
T 3gx8_A 8 AIEDAIE----SAPVVLFMKGTPEFPKCGFSRATIGLLGNQ-------GVDPAKFAAYNVLED-PELREGIKEFSEWPTI 75 (121)
T ss_dssp HHHHHHH----SCSEEEEESBCSSSBCTTHHHHHHHHHHHH-------TBCGGGEEEEECTTC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHhc----cCCEEEEEeccCCCCCCccHHHHHHHHHHc-------CCCcceEEEEEecCC-HHHHHHHHHHhCCCCC
Confidence 3455554 3445554444 5999999999888875 355 778888877 4443 033467889
Q ss_pred CEEEEEeCCC
Q 012424 431 PTILFFPKHS 440 (464)
Q Consensus 431 PTi~lf~~g~ 440 (464)
|.++ -+|+
T Consensus 76 P~vf--I~g~ 83 (121)
T 3gx8_A 76 PQLY--VNKE 83 (121)
T ss_dssp CEEE--ETTE
T ss_pred CeEE--ECCE
Confidence 9874 4565
No 331
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.06 E-value=0.011 Score=55.15 Aligned_cols=58 Identities=12% Similarity=0.224 Sum_probs=43.6
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc--HHHHHHcCCCCCCCEEEEEeCCC
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--KEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~--~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
...++.|..+||++|++.+..|++. ++.+-.+|++.+. .++. +.++..++|+++ .+|+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~~~~~~~~l~-~~~g~~~vP~~~--~~g~ 228 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-------GLSFEEIILGHDATIVSVR-AVSGRTTVPQVF--IGGK 228 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-------TCCCEEEETTTTCCHHHHH-HHTCCSSSCEEE--ETTE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-------CCceEEEECCCchHHHHHH-HHhCCCCcCEEE--ECCE
Confidence 4557788999999999999888764 3666777877652 3466 788999999985 3554
No 332
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.05 E-value=0.012 Score=48.45 Aligned_cols=55 Identities=11% Similarity=0.036 Sum_probs=38.8
Q ss_pred EEEEEecCCChhHH------hhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHcC--------CCCCCCEEEEE
Q 012424 375 WLVVLYAPWCQFCQ------AMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKL--------QLGSFPTILFF 436 (464)
Q Consensus 375 vlV~Fya~wC~~C~------~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~----l~~~~~--------~I~~~PTi~lf 436 (464)
-|+.|+.+||++|+ +.+..|++ . ++.|..+|++.+ ++ +. +.+ +...+|.|+
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~----~---gi~y~~vdI~~~-~~~~~~l~-~~~~~~~~~~~g~~tvP~vf-- 77 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA----N---KIEFEEVDITMS-EEQRQWMY-KNVPPEKKPTQGNPLPPQIF-- 77 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH----T---TCCEEEEETTTC-HHHHHHHH-HSCCTTTCCSSSSCCSCEEE--
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH----c---CCCEEEEECCCC-HHHHHHHH-HHhcccccccCCCCCCCEEE--
Confidence 46778899999999 56655553 2 588999999887 44 34 444 666789874
Q ss_pred eCCC
Q 012424 437 PKHS 440 (464)
Q Consensus 437 ~~g~ 440 (464)
-+|+
T Consensus 78 i~g~ 81 (111)
T 2ct6_A 78 NGDR 81 (111)
T ss_dssp ETTE
T ss_pred ECCE
Confidence 3554
No 333
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.02 E-value=0.0082 Score=49.52 Aligned_cols=58 Identities=16% Similarity=0.350 Sum_probs=40.4
Q ss_pred CCcEEEEEec-----CCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---HcCCCCCCCEEEEEeCCC
Q 012424 372 QEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 372 ~k~vlV~Fya-----~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~---~~~~I~~~PTi~lf~~g~ 440 (464)
..+|+ .|.. +|||+|+..+..|.+. ++.+..+|++.+ +++.. +..+...+|.+++ +|+
T Consensus 15 ~~~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~-------gi~y~~~di~~d-~~~~~~l~~~~g~~tvP~ifi--~g~ 80 (111)
T 3zyw_A 15 AAPCM-LFMKGTPQEPRCGFSKQMVEILHKH-------NIQFSSFDIFSD-EEVRQGLKAYSSWPTYPQLYV--SGE 80 (111)
T ss_dssp SSSEE-EEESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCCSSCEEEE--TTE
T ss_pred cCCEE-EEEecCCCCCcchhHHHHHHHHHHc-------CCCeEEEECcCC-HHHHHHHHHHHCCCCCCEEEE--CCE
Confidence 34444 4667 9999999999888753 477888899877 54430 2336788999843 554
No 334
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=95.99 E-value=0.011 Score=46.76 Aligned_cols=54 Identities=9% Similarity=-0.026 Sum_probs=38.8
Q ss_pred EEEEecCCChhH------HhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHcCC--CCCCCEEEEEeCCC
Q 012424 376 LVVLYAPWCQFC------QAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQ--LGSFPTILFFPKHS 440 (464)
Q Consensus 376 lV~Fya~wC~~C------~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~----l~~~~~~--I~~~PTi~lf~~g~ 440 (464)
++.|+.+||++| +.....|++. ++.+-.+|++.+ ++ +. +.++ ...+|.++ -+|+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~-------~i~~~~~di~~~-~~~~~~l~-~~~g~~~~~vP~if--i~g~ 69 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK-------RIQYQLVDISQD-NALRDEMR-TLAGNPKATPPQIV--NGNH 69 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT-------TCCCEEEETTSC-HHHHHHHH-HHTTCTTCCSCEEE--ETTE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC-------CCceEEEECCCC-HHHHHHHH-HHhCCCCCCCCEEE--ECCE
Confidence 667899999999 6776665532 588889999877 33 33 4667 67999874 3554
No 335
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=95.99 E-value=0.047 Score=52.20 Aligned_cols=80 Identities=16% Similarity=0.201 Sum_probs=54.9
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC-----------------cHHHHHHcCCCCCC--CE
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD-----------------QKEYAKQKLQLGSF--PT 432 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~-----------------~~~l~~~~~~I~~~--PT 432 (464)
....+..|..++|++|...+..+.+++..+ ++....++++.. +..+. ++++..++ |.
T Consensus 42 ~~~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~-~~~G~~tVyTPq 117 (270)
T 2axo_A 42 VKGVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYM-RALGRNGVYTPQ 117 (270)
T ss_dssp CCCEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHH-HHTTCSCCCSSE
T ss_pred CCcEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEEEecccccccchhhhhhhHHHHHHH-HHhCCCcccCCE
Confidence 346788899999999999999999998765 354344443321 13466 78899988 99
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
+++ +|+ . ...| .+.+.|.+.|.+
T Consensus 118 I~I--ng~--~-~v~G--~d~~~l~~~l~~ 140 (270)
T 2axo_A 118 AIL--NGR--D-HVKG--ADVRGIYDRLDA 140 (270)
T ss_dssp EEE--TTT--E-EEET--TCHHHHHHHHHH
T ss_pred EEE--CCE--E-eecC--CCHHHHHHHHHH
Confidence 765 565 2 2223 467778777753
No 336
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.94 E-value=0.048 Score=50.83 Aligned_cols=98 Identities=15% Similarity=0.220 Sum_probs=66.8
Q ss_pred eeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
+..++.++++.++. .+..+++.+.|...-|..+ .+++..+.. .++.+..++ +.+ .+++ ++|+|.++||
T Consensus 140 l~~~~~~~l~~~~~-~~~~~~~al~f~~~~~~~~-------~~~~~d~~~~~~i~v~~~~-~~~-~~l~-~~f~v~~~Ps 208 (244)
T 3q6o_A 140 LEPAXLEEIDGFFA-RNNEEYLALIFEXGGSYLA-------REVALDLSQHKGVAVRRVL-NTE-ANVV-RKFGVTDFPS 208 (244)
T ss_dssp CSCCCHHHHHTHHH-HCCCSEEEEEEECTTCCHH-------HHHHHHTTTCTTEEEEEEE-TTC-HHHH-HHHTCCCSSE
T ss_pred cccccHHHHHHHhh-cCCCceEEEEEEECCcchH-------HHHHHHhccCCceEEEEEe-Cch-HHHH-HHcCCCCCCe
Confidence 33345677777765 3456778888887765433 334444443 357777666 445 7999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|..+++ ...+....-+.+.+..++++|
T Consensus 209 lvl~~~~g~-~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 209 CYLLFRNGS-VSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp EEEEETTSC-EEECCCSSSSHHHHHHHHHTC
T ss_pred EEEEeCCCC-eEeeccccccHHHHHHHHHhC
Confidence 998875543 566665456778888888875
No 337
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=95.81 E-value=0.0066 Score=55.04 Aligned_cols=41 Identities=24% Similarity=0.552 Sum_probs=34.9
Q ss_pred CCcEEEEEecCCChhHHhhHHHH---HHHHHHhcCCCeEEEEEEc
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRA 413 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~---~~la~~~~~~~v~~~~Id~ 413 (464)
++++||.|+..|||+|+.+.|.+ .++.+.+.+ ++.|..++.
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~ 64 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHV 64 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEEC
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEec
Confidence 47899999999999999999987 699999976 577766664
No 338
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=95.20 E-value=0.021 Score=59.73 Aligned_cols=107 Identities=21% Similarity=0.272 Sum_probs=63.5
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHH----HhcCCC
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALV----RSKGLF 187 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~----~~~g~~ 187 (464)
.++.+.+|||-||.++ .++.+...++..+++... ..+| .++++++++++|++.+.+.....++...+ .....+
T Consensus 239 ~~v~v~LSGGlDSs~vaala~~~~~~~~~~t~~~~-~~~E-~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~~~~~~~~ 316 (503)
T 1q15_A 239 DTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTE-LSNE-FEFSQQVADALGTHHQMKILSETEVINGIIESIYYNEIF 316 (503)
T ss_dssp SEEEEECCSSHHHHHHHHHHTTTCSEEEEEEEEET-TBCC-HHHHHHHHHHHTCEEEEEEECHHHHHHHHHHHHHHHCCC
T ss_pred CcEEEECCCCHHHHHHHHHHHHhCCCcEEEEEeCC-CccH-HHHHHHHHHHhCCceEEEECCHHHHHHHHHHHHHHhcCC
Confidence 4689999999999776 667666656777766543 2333 57899999999999887765554332221 111111
Q ss_pred CCCCcchhhhhhccccchHHH-HhccCcEEEEeeeccCCc
Q 012424 188 SFYEDGHQECCRVRKVRPLRR-ALKGLRAWITGQRKDQSP 226 (464)
Q Consensus 188 ~~~~~~~~~Cc~~~Kv~Pl~r-~l~~~~~~itG~R~~ES~ 226 (464)
. ....+. .....-+.+ +-.+.++.++|.-.||-.
T Consensus 317 ~----p~~~~~-~~~~~~l~~~a~~~~~VvltG~GaDElf 351 (503)
T 1q15_A 317 D----GLSAEI-QSGLFNVYRQAQGQVSCMLTGYGSDLLF 351 (503)
T ss_dssp C----HHHHHH-HHHHHHHHHHHBTTBSEEECCTTHHHHH
T ss_pred C----cccchh-HHHHHHHHHHHHCCCCEEEeCCChhhhc
Confidence 0 011111 111112222 223667999999888864
No 339
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=95.04 E-value=0.035 Score=49.97 Aligned_cols=92 Identities=10% Similarity=0.168 Sum_probs=62.7
Q ss_pred CCCcEEEEEe-cCCChhHH-hhHHHHHHHHHHh-cCCCeE-EEEEEcCCC---------------------cHHHHHHcC
Q 012424 371 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKL-AGNGVK-VGKFRADGD---------------------QKEYAKQKL 425 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~-~~~p~~~~la~~~-~~~~v~-~~~Id~d~~---------------------~~~l~~~~~ 425 (464)
.++.+|++|| ..||+.|. ...+.|.+...++ ...++. ++.|.+|.. +.+++ +.|
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a-~~y 120 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFT-DSM 120 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHH-HHh
Confidence 3667777777 68999999 8999999999999 665674 777776441 14678 788
Q ss_pred CCC-----------CCCEEEEEeCCCCCeeecCC--C---------CCCHHHHHHHHHHh
Q 012424 426 QLG-----------SFPTILFFPKHSSKPIKYPS--E---------RRDVDSLMAFVDAL 463 (464)
Q Consensus 426 ~I~-----------~~PTi~lf~~g~~~~~~y~g--g---------~~~~e~L~~fI~~l 463 (464)
++. .....+++.+|....+.... + ..+.+++.++|++.
T Consensus 121 Gv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~~ 180 (182)
T 1xiy_A 121 NMLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKNN 180 (182)
T ss_dssp TCEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHCC
T ss_pred CCceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHhc
Confidence 762 24566777766533222211 1 36788898888753
No 340
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=94.29 E-value=0.069 Score=47.59 Aligned_cols=41 Identities=17% Similarity=0.359 Sum_probs=34.5
Q ss_pred CCcEEEEEecCCChhHHhhHHHH-HHHHHHhcCCCeEEEEEEc
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSY-VELADKLAGNGVKVGKFRA 413 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~-~~la~~~~~~~v~~~~Id~ 413 (464)
.++++|.||..+||+|..+.+.+ .++.+.+.+ .+.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEec
Confidence 46788999999999999999999 999998876 577666654
No 341
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=94.28 E-value=0.14 Score=53.66 Aligned_cols=98 Identities=12% Similarity=0.175 Sum_probs=63.7
Q ss_pred eeecCcchHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012424 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPT 432 (464)
Q Consensus 354 v~~L~~~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~-~~v~~~~Id~d~~~~~l~~~~~~I~~~PT 432 (464)
+..++.++++.++. .+..++++|.|+... .....+++..+.. .++.|..++ +.+ .+++ ++|+|..+|+
T Consensus 140 l~~it~~~l~~~l~-~~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~-~~~-~~l~-~kfgV~~~Ps 208 (519)
T 3t58_A 140 LEPAKLNDIDGFFT-RNKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVL-NTE-SDLV-NKFGVTDFPS 208 (519)
T ss_dssp CSBCCHHHHTTGGG-SCCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEE-TTC-HHHH-HHHTCCCSSE
T ss_pred cCcCCHHHHHHHhc-cCCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEec-Cch-HHHH-HHcCCCCCCe
Confidence 44456677877765 345678888888664 2245666666664 357776554 445 7999 9999999999
Q ss_pred EEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 433 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 433 i~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
+++|..+++ ...+....-.-..+..++++|
T Consensus 209 lvl~~~nGk-~~~~~v~~~~r~~~~~~l~~l 238 (519)
T 3t58_A 209 CYLLLRNGS-VSRVPVLVESRSFYTSYLRGL 238 (519)
T ss_dssp EEEEETTSC-EEECCCSSCSHHHHHHHHTTS
T ss_pred EEEEeCCCc-eeecccccccHHHHHHHHHHc
Confidence 999977664 333343223334455666543
No 342
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=94.19 E-value=0.27 Score=51.87 Aligned_cols=107 Identities=16% Similarity=0.259 Sum_probs=62.7
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCC--------------CeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 012424 113 NDIAIAFSGAEDVALI-EYAHLTGR--------------PFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 177 (464)
Q Consensus 113 ~~i~vafSGGKDS~ll-~L~~~~~~--------------~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~ 177 (464)
.++.+.+|||-||.++ .++.+... .+..+++.... .+| ..+++++++++|++.+.+.....+.
T Consensus 227 vpvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~~-~~E-~~~A~~vA~~lg~~h~~i~~~~~~~ 304 (553)
T 1ct9_A 227 VPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPG-SPD-LKAAQEVANHLGTVHHEIHFTVQEG 304 (553)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTT-CHH-HHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCCC-CcH-HHHHHHHHHHhCCCCEEEECCHHHH
Confidence 4699999999998766 67766433 26666665432 355 5789999999999988776554332
Q ss_pred ----HHHHHhcCCCCCCCcchhhhhhccccchHHHHhc--cCcEEEEeeeccCCc
Q 012424 178 ----QALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSP 226 (464)
Q Consensus 178 ----~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~R~~ES~ 226 (464)
...+..... +......| .+ ...-+.+..+ +.+++++|.-.||-.
T Consensus 305 ~~~l~~~i~~~~~---~~~~~~~~-~~-~~~~l~~~a~~~g~~vvLsG~GaDElf 354 (553)
T 1ct9_A 305 LDAIRDVIYHIET---YDVTTIRA-ST-PMYLMSRKIKAMGIKMVLSGEGSDEVF 354 (553)
T ss_dssp HHHHHHHHHHHCC---CCHHHHHH-HH-HHHHHHHHHHHTTCCEEECCTTHHHHH
T ss_pred HHHHHHHHHHhcC---CCcccchH-HH-HHHHHHHHHHHcCCeEEEECCCchhcc
Confidence 222222222 11111111 11 1122333332 568999999888854
No 343
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=93.86 E-value=0.092 Score=55.01 Aligned_cols=119 Identities=20% Similarity=0.208 Sum_probs=69.1
Q ss_pred HHHHHHHHHH-c--CCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHH
Q 012424 101 LEIMDRALEK-F--GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVE 176 (464)
Q Consensus 101 ~eil~~a~~~-~--~~~i~vafSGGKDS~ll-~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~ 176 (464)
.+.|+.+++. . ..++.+.+|||-||.++ .++.+...++..+++.... .+| ..+++++++++|++.+.+.....+
T Consensus 227 ~~~L~~aV~~rl~sd~~vgv~LSGGlDSS~vaala~~~~~~v~tfti~~~~-~~E-~~~A~~vA~~lg~~h~~i~i~~~~ 304 (513)
T 1jgt_A 227 RAALEKAVAQRVTPGDTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTDT-SNE-FREARAVVDHLRTRHREITIPTTE 304 (513)
T ss_dssp HHHHHHHHHHHSCTTCCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECSS-CCC-HHHHHHHHHHHTCEEEEEECCHHH
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCcHHHHHHHHHHHHhCCCceEEEcCCCC-CCH-HHHHHHHHHHhCCCcEEEECCHHH
Confidence 3445555544 1 24689999999998766 6776665667777776542 333 578999999999998887655433
Q ss_pred HH----HHHHhcCCCCCCCcchhhhhhccccchHHHHh-ccCcEEEEeeeccCCc
Q 012424 177 VQ----ALVRSKGLFSFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSP 226 (464)
Q Consensus 177 ~~----~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l-~~~~~~itG~R~~ES~ 226 (464)
+. ..+.....+ . ....|. .....-+.+.. .+.+++++|.-.||-.
T Consensus 305 ~~~~l~~~~~~~~~~---~-p~~~~~-~~~~~~l~~~a~~g~~VvltG~GaDElf 354 (513)
T 1jgt_A 305 LLAQLPYAVWASESV---D-PDIIEY-LLPLTALYRALDGPERRILTGYGADIPL 354 (513)
T ss_dssp HHTTHHHHHHHHCCC---C-HHHHHH-HHHHHHHHHHCCSSCCEEECCTTTHHHH
T ss_pred HHHHHHHHHHHhCCC---C-cccchh-HHHHHHHHHHHHcCCCEEEeCCChhhcc
Confidence 22 112111111 0 001111 11112222222 3667999999888854
No 344
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=93.49 E-value=0.29 Score=51.80 Aligned_cols=66 Identities=20% Similarity=0.231 Sum_probs=51.2
Q ss_pred HHHHHHcC-CcEEEEechhHHHHHH-HHHHH-cC-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEE
Q 012424 105 DRALEKFG-NDIAIAFSGAEDVALI-EYAHL-TG-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYM 170 (464)
Q Consensus 105 ~~a~~~~~-~~i~vafSGGKDS~ll-~L~~~-~~-~~i~vv~~DTg~~fpeT~~~~~~~~~~~gl~i~~~ 170 (464)
+.-+.+.+ ..++|+.|||-||+++ -|+.+ .+ .++..+++-+-..-.+|++-...+++.+|+....+
T Consensus 292 ~dy~~k~g~~~~vlglSGGiDSal~~~la~~alg~~~v~~v~mp~~~ts~~t~~~a~~la~~lg~~~~~i 361 (565)
T 4f4h_A 292 RDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMARRVGVRYDEI 361 (565)
T ss_dssp HHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCTTCCHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHcCCCcEEEecCCCccHHHHHHHHHHHhCCccEEEEeccccccccchHHHHHHHHHHhCCceeee
Confidence 33444444 5699999999999877 44444 34 35788888888889999999999999999988765
No 345
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=93.41 E-value=0.13 Score=42.94 Aligned_cols=52 Identities=13% Similarity=0.062 Sum_probs=34.9
Q ss_pred EEEEEecCCChhHH------hhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcC--------CCCCCCEEE
Q 012424 375 WLVVLYAPWCQFCQ------AMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKL--------QLGSFPTIL 434 (464)
Q Consensus 375 vlV~Fya~wC~~C~------~~~p~~~~la~~~~~~~v~~~~Id~d~~~---~~l~~~~~--------~I~~~PTi~ 434 (464)
||+.|.++.||+|+ ..+..|+ ..+|.|-.+|++.+. .++. ++. +...+|.|+
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~-------~kgV~feEidI~~d~~~r~eM~-~~~~~~~~~~~G~~tvPQIF 69 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLE-------ANKIGFEEKDIAANEENRKWMR-ENVPENSRPATGYPLPPQIF 69 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHH-------HTTCCEEEEECTTCHHHHHHHH-HHSCGGGSCSSSSCCSCEEE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHH-------HCCCceEEEECCCCHHHHHHHH-HhccccccccCCCcCCCEEE
Confidence 46778899999994 4333332 236999999998772 2344 455 666788654
No 346
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=92.44 E-value=0.21 Score=41.51 Aligned_cols=68 Identities=18% Similarity=0.293 Sum_probs=43.1
Q ss_pred cchHHHHHhhcCCCCcEEEEEe----cCCChhHHhhHHHHHHHHHHhcCCCe-EEEEEEcCCCcHHHHH---HcCCCCCC
Q 012424 359 RTGMENLARLDHRQEPWLVVLY----APWCQFCQAMEGSYVELADKLAGNGV-KVGKFRADGDQKEYAK---QKLQLGSF 430 (464)
Q Consensus 359 ~~~f~~~i~~~~~~k~vlV~Fy----a~wC~~C~~~~p~~~~la~~~~~~~v-~~~~Id~d~~~~~l~~---~~~~I~~~ 430 (464)
.+.++++++ ..+|+|+-- .|.|++|.+....|... ++ .|..+|++.+ +++.. +.-+-..+
T Consensus 10 ~e~i~~~i~----~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~-------gv~~~~~~~v~~~-~~~r~~l~~~sg~~Tv 77 (118)
T 2wul_A 10 AEQLDALVK----KDKVVVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTI 77 (118)
T ss_dssp HHHHHHHHH----HSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCSCEEEETTSC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHh----cCCEEEEEcCCCCCCCCHHHHHHHHHHHHh-------CCcCeEeecccCC-HHHHHHHHHhccCCCC
Confidence 456777775 344555432 36899999998777543 34 3778888877 54430 33456778
Q ss_pred CEEEEEeCCC
Q 012424 431 PTILFFPKHS 440 (464)
Q Consensus 431 PTi~lf~~g~ 440 (464)
|.|+ -+|+
T Consensus 78 PqIF--I~g~ 85 (118)
T 2wul_A 78 PQVY--LNGE 85 (118)
T ss_dssp CEEE--ETTE
T ss_pred CeEe--ECCE
Confidence 8874 4565
No 347
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=92.26 E-value=1.1 Score=40.41 Aligned_cols=29 Identities=24% Similarity=0.520 Sum_probs=26.1
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcC
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAG 403 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~ 403 (464)
.|.+|+.+-||+|-...+.++++.+.+.+
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~~ 32 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLPG 32 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSCT
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCCC
Confidence 57788899999999999999999999864
No 348
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=92.21 E-value=0.091 Score=46.75 Aligned_cols=45 Identities=13% Similarity=0.194 Sum_probs=36.4
Q ss_pred CCCcEEEEEe-cCCChhHHhhHHHHHHHHHHhcCCCeE-EEEEEcCC
Q 012424 371 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVK-VGKFRADG 415 (464)
Q Consensus 371 ~~k~vlV~Fy-a~wC~~C~~~~p~~~~la~~~~~~~v~-~~~Id~d~ 415 (464)
.++.+|++|| ..||+.|....+.|.+..++++..++. ++.|.+|.
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~ 87 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVND 87 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 3577888888 679999999999999999998765674 87777654
No 349
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=90.58 E-value=0.55 Score=38.83 Aligned_cols=34 Identities=6% Similarity=0.015 Sum_probs=26.0
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 416 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~ 416 (464)
++.|+.|+|+.|++.+..|++. ++.+-.+|+..+
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~~ 40 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-------GIDYTFHDYKKE 40 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCcEEEEeeeCC
Confidence 5678899999999998888763 466777777543
No 350
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=88.99 E-value=0.18 Score=50.13 Aligned_cols=60 Identities=13% Similarity=0.150 Sum_probs=35.6
Q ss_pred EEEEecCCChhHHhhHH-HHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHcCCCCCCCEEEEEeCCC
Q 012424 376 LVVLYAPWCQFCQAMEG-SYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p-~~~~la~~~~~~~v~~~~Id~d~~~----~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
++.|..+||++|++.+. .|+++.-.|. .+.++.+|-...+ .++. +..+...+|.++ -+|+
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~--eidVlEld~~~~~~e~~~~L~-~~tG~~TVPqVF--I~Gk 327 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRS--KVLVLQLNDMKEGADIQAALY-EINGQRTVPNIY--INGK 327 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTT--TEEEEEGGGSTTHHHHHHHHH-HHHCCCSSCEEE--ETTE
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcc--eEEEEEeccccCCHHHHHHHH-HHHCCCCcCEEE--ECCE
Confidence 55688999999999875 4554432222 2444444322221 2344 556888999874 3565
No 351
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=88.66 E-value=0.61 Score=41.55 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=32.7
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHh-cCCCeEEEEEE
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL-AGNGVKVGKFR 412 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~-~~~~v~~~~Id 412 (464)
..+.+||.|....||+|+.+.+.+.++.+++ .+ +|.|+.-+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g-~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGED-NVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTT-TEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-CEEEEEEE
Confidence 3567888899999999999999998877776 44 67776554
No 352
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=88.30 E-value=0.88 Score=40.10 Aligned_cols=42 Identities=17% Similarity=0.329 Sum_probs=32.2
Q ss_pred CCCcEEEEEecCCChhHHhhHHHH-HHHHHHhcC-CCeEEEEEE
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFR 412 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~-~~la~~~~~-~~v~~~~Id 412 (464)
..+..|+.|+.+.||+|..+.+.+ ..|.+.|.+ .+|.|....
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 457789999999999999999998 578778853 246666543
No 353
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=86.36 E-value=0.52 Score=44.99 Aligned_cols=30 Identities=17% Similarity=0.366 Sum_probs=25.9
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHH
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADK 400 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~ 400 (464)
.++.+|+.|+-+.||+|+++.+.+.+..+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 467899999999999999999999965544
No 354
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=85.86 E-value=1.5 Score=39.74 Aligned_cols=43 Identities=12% Similarity=0.039 Sum_probs=32.0
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHH-Hhc-CCCeEEEEEEc
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELAD-KLA-GNGVKVGKFRA 413 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~-~~~-~~~v~~~~Id~ 413 (464)
..+.+||.|....||+|+.+.+.+....+ +|. +.+|.|+..+.
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 35678999999999999999988765444 772 23677776653
No 355
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=85.75 E-value=0.63 Score=49.30 Aligned_cols=67 Identities=10% Similarity=0.245 Sum_probs=43.5
Q ss_pred chHHHHHhhcCCCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC--cHHHH---HHcCCCCCCCEEE
Q 012424 360 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QKEYA---KQKLQLGSFPTIL 434 (464)
Q Consensus 360 ~~f~~~i~~~~~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~--~~~l~---~~~~~I~~~PTi~ 434 (464)
+.+++++. .. -++.|..+|||+|+..+..|.+. ++.+-.+|++.. ..++. ++..+...+|.+
T Consensus 9 ~~v~~~i~---~~--~v~vy~~~~Cp~C~~~k~~L~~~-------~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v- 75 (598)
T 2x8g_A 9 QWLRKTVD---SA--AVILFSKTTCPYCKKVKDVLAEA-------KIKHATIELDQLSNGSAIQKCLASFSKIETVPQM- 75 (598)
T ss_dssp HHHHHHHH---HC--SEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE-
T ss_pred HHHHHHhc---cC--CEEEEECCCChhHHHHHHHHHHC-------CCCcEEEEcccCcchHHHHHHHHHHhCCceeCEE-
Confidence 45666664 22 36779999999999999888854 355566776643 12222 034577899987
Q ss_pred EEeCCC
Q 012424 435 FFPKHS 440 (464)
Q Consensus 435 lf~~g~ 440 (464)
|-+|+
T Consensus 76 -~i~g~ 80 (598)
T 2x8g_A 76 -FVRGK 80 (598)
T ss_dssp -EETTE
T ss_pred -EECCE
Confidence 44555
No 356
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=85.57 E-value=10 Score=30.49 Aligned_cols=82 Identities=10% Similarity=0.063 Sum_probs=63.8
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhc-CCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCH
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLA-GNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 453 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~-~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~ 453 (464)
....|.|..-+..+.....+.++-+.+- +..+.+-.||+.++ ++++ +.++|-.+||++=....- .....| .--.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eq-PeLA-E~~~IvATPTLIK~~P~P--~rriiG-d~i~ 87 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQ-PQLV-EYYRLVVTPALVKIGPGS--RQVLSG-IDLT 87 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTC-HHHH-HHTTCCSSSEEEEEESSS--CEEEES-SCHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccC-HHHH-hHcCeeeccHhhccCCCC--ceEEeC-hHHH
Confidence 4557888888999998888888877766 45799999999999 9999 999999999998765443 234444 4556
Q ss_pred HHHHHHHH
Q 012424 454 DSLMAFVD 461 (464)
Q Consensus 454 e~L~~fI~ 461 (464)
+.|..|.-
T Consensus 88 ~ql~~wwp 95 (105)
T 1t4y_A 88 DQLANQLP 95 (105)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhH
Confidence 77777764
No 357
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=83.81 E-value=1.2 Score=40.20 Aligned_cols=43 Identities=12% Similarity=0.242 Sum_probs=33.7
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
...+ .+++|.++||++++.+|+. ...+.| ..+.+.|.++|+++
T Consensus 166 ~~~a-~~~gv~g~Pt~~i~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 166 FQRV-AQWGISGFPALVVESGTDR-YLITTG-YRPIEALRQLLDTW 208 (216)
T ss_dssp HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCcccceEEEEECCEE-EEeccC-CCCHHHHHHHHHHH
Confidence 5667 7999999999999988872 224455 68899999998764
No 358
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=81.47 E-value=1.5 Score=36.80 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=26.9
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 416 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~ 416 (464)
++.|+.++|+.|++.+..+++. ++.+-.+|++.+
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCceEEEEccCC
Confidence 5678899999999998888763 477777888765
No 359
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=77.28 E-value=2.5 Score=34.83 Aligned_cols=34 Identities=12% Similarity=0.231 Sum_probs=26.7
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 416 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~ 416 (464)
+..|+.|+|+.|++....+++. ++.|-.+|+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH-------DVVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-------CCCeEEEecccC
Confidence 4568899999999998777642 577888888765
No 360
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=74.07 E-value=2.7 Score=34.22 Aligned_cols=34 Identities=12% Similarity=-0.058 Sum_probs=26.1
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 416 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~ 416 (464)
++.|+.|+|+.|++.+..|++. ++.+-.+|+.++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~-------gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH-------KVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC-------CCceEEEeecCC
Confidence 4578899999999998877752 477777887643
No 361
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=73.84 E-value=5.1 Score=32.83 Aligned_cols=36 Identities=17% Similarity=0.439 Sum_probs=29.4
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEc
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 413 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~ 413 (464)
|.+||.|.-|.|+-|......+.+|. + +..+.+||+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~le----d-eY~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELK----S-EYDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTT----T-TEEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhh----c-cccEEEEEe
Confidence 56899999999999999888875444 3 567889986
No 362
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=72.61 E-value=4.7 Score=33.18 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=26.8
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 416 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~ 416 (464)
+..|+.|+|+.|++.+..+++- ++.|-.+|+.++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 38 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL-------AWDYDAIDIKKN 38 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCceEEEEeccC
Confidence 5567899999999998777652 477888888765
No 363
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=66.13 E-value=5.8 Score=34.60 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=29.3
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
..++ ++++|.++||+++ +|+ . +.| ..+.+.|.++|+++
T Consensus 139 ~~~a-~~~gv~GtPt~vv--nG~--~--~~G-~~~~~~l~~~i~~~ 176 (186)
T 3bci_A 139 KKIA-KDNHIKTTPTAFI--NGE--K--VED-PYDYESYEKLLKDK 176 (186)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE--E--CSC-TTCHHHHHHHHHC-
T ss_pred HHHH-HHcCCCCCCeEEE--CCE--E--cCC-CCCHHHHHHHHHHH
Confidence 4667 7899999999987 665 2 345 68999999999764
No 364
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=65.79 E-value=5.2 Score=35.29 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=30.9
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
...+ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+.+
T Consensus 142 ~~~a-~~~gv~GtPtfvv--ng~~-~v~~~G-a~~~e~~~~~i~~l 182 (185)
T 3feu_A 142 KMLS-EKSGISSVPTFVV--NGKY-NVLIGG-HDDPKQIADTIRYL 182 (185)
T ss_dssp HHHH-HHHTCCSSSEEEE--TTTE-EECGGG-CSSHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EEecCC-CCCHHHHHHHHHHH
Confidence 5667 7899999999987 6662 234455 67899998888765
No 365
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=63.91 E-value=5 Score=33.03 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=26.6
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 416 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~ 416 (464)
+..|+.|+|+.|++.+..+++- ++.|-.+|+.++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 39 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN-------NIEYTNRLIVDD 39 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTT
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCceEEEecccC
Confidence 5678899999999988777642 577788888665
No 366
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=59.11 E-value=25 Score=36.20 Aligned_cols=78 Identities=13% Similarity=0.070 Sum_probs=54.6
Q ss_pred CCCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCC
Q 012424 371 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSER 450 (464)
Q Consensus 371 ~~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~ 450 (464)
-.+++.+.++.+-|..|.++...++++++. .+ +|.+... + . .. ...|++.+..+|+...+.|.| .
T Consensus 17 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~-~i~~~~~--~-~------~~---~~~p~~~~~~~~~~~~i~f~g-~ 81 (521)
T 1hyu_A 17 LTKPVELIATLDDSAKSAEIKELLAEIAEL-SD-KVTFKED--N-T------LP---VRKPSFLITNPGSQQGPRFAG-S 81 (521)
T ss_dssp CCSCEEEEEECCSSHHHHHHHHHHHHHHTT-CT-TEEEEEC--T-T------SS---SCSSEEEEECTTCCCSCEEES-C
T ss_pred CCCCEEEEEEeCCCcchHHHHHHHHHHHHh-CC-ceEEEEc--C-C------cc---cCCCEEEEecCCCcceEEEec-c
Confidence 467888888888899999999999998754 33 5665322 1 2 11 468999999877655678876 4
Q ss_pred CCHHHHHHHHHHh
Q 012424 451 RDVDSLMAFVDAL 463 (464)
Q Consensus 451 ~~~e~L~~fI~~l 463 (464)
..-.++..||..|
T Consensus 82 p~g~e~~s~~~~l 94 (521)
T 1hyu_A 82 PLGHEFTSLVLAL 94 (521)
T ss_dssp CCGGGHHHHHHHH
T ss_pred CcchhHHHHHHHH
Confidence 5555676766543
No 367
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=57.10 E-value=5.8 Score=33.67 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=43.2
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcCCCCCCCEEEEEeCCCCCeeec---CCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIKY---PSE 449 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~---~~l~~~~~~I~~~PTi~lf~~g~~~~~~y---~gg 449 (464)
+..|+.|+|+.|++.+..|++- ++.|-.+|+..+. .++. +-++-.++|.--+|..... .++- ...
T Consensus 4 itiY~~p~C~~crkak~~L~~~-------gi~~~~idi~~~~~~~~eL~-~~~~~~g~p~~~l~n~~~~-~yk~l~l~~~ 74 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS-------GTEPTIILYLENPPSRDELV-KLIADMGISVRALLRKNVE-PYEQLGLAED 74 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-------TCCCEEECTTTSCCCHHHHH-HHHHHHTSCHHHHBCSSSH-HHHHTTTTSS
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCCEEEEECCCCCccHHHHH-HHhcccCCCHHHhccCCch-hHHhcCCccc
Confidence 4567899999999988777652 5777788887641 2332 2233335565445543332 1111 111
Q ss_pred CCCHHHHHHHHH
Q 012424 450 RRDVDSLMAFVD 461 (464)
Q Consensus 450 ~~~~e~L~~fI~ 461 (464)
..+.+++.+.+.
T Consensus 75 ~ls~~~~~~lm~ 86 (141)
T 1s3c_A 75 KFTDDQLIDFML 86 (141)
T ss_dssp CCCHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 246666666554
No 368
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=56.02 E-value=5.4 Score=34.82 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=29.2
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
...+ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+.+
T Consensus 152 ~~~a-~~~gv~gtPt~~i--ng~~-~~~~~g-~~~~~~l~~~i~~~ 192 (195)
T 3c7m_A 152 KASY-DVAKIQGVPAYVV--NGKY-LIYTKS-IKSIDAMADLIREL 192 (195)
T ss_dssp GGHH-HHHHHHCSSEEEE--TTTE-EECGGG-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EeccCC-CCCHHHHHHHHHHH
Confidence 4567 7889999999765 6662 223223 67899999998865
No 369
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=55.60 E-value=5.3 Score=32.88 Aligned_cols=34 Identities=9% Similarity=0.090 Sum_probs=26.3
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 416 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~ 416 (464)
+..|+.|+|+.|++....+++ .++.|-.+|+.++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~ 40 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLET 40 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTS
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccC
Confidence 566889999999998877653 2577778888765
No 370
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=54.67 E-value=20 Score=31.74 Aligned_cols=39 Identities=15% Similarity=0.333 Sum_probs=29.2
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEE
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 412 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id 412 (464)
...|+.|+...||+|....+.+.++.+.... ++.|....
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~-~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQEYSA-FLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHhcCCC-CeEEEEee
Confidence 3567888899999999999999999884332 46555443
No 371
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=54.18 E-value=14 Score=32.65 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=27.5
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
...+ ++++|.++||+++ +|+ .+. |+. +.+.|.+.|+.+
T Consensus 144 ~~~a-~~~gv~gtPt~vv--ng~--~~~--~~~-~~e~l~~~i~~l 181 (193)
T 3hz8_A 144 QELT-ETFQIDGVPTVIV--GGK--YKV--EFA-DWESGMNTIDLL 181 (193)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT--EEE--CCS-SHHHHHHHHHHH
T ss_pred HHHH-HHhCCCcCCEEEE--CCE--EEe--cCC-CHHHHHHHHHHH
Confidence 4667 7999999999986 666 222 223 888888877654
No 372
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=52.97 E-value=33 Score=27.60 Aligned_cols=55 Identities=15% Similarity=0.277 Sum_probs=40.5
Q ss_pred hcCCCeEEEEEEcCCCc---------HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 012424 401 LAGNGVKVGKFRADGDQ---------KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 461 (464)
Q Consensus 401 ~~~~~v~~~~Id~d~~~---------~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~ 461 (464)
++..++.+.+.|...+. .++. +++++..+|.+++ +|+ +...|...+.++|.+|+.
T Consensus 39 lk~~Gi~V~RyNL~~~P~~F~~N~~V~~~L-~~~G~~~LP~~~V--DGe---vv~~G~yPt~eEl~~~lg 102 (106)
T 3ktb_A 39 LKKQGIIVTRHNLRDEPQVYVSNKTVNDFL-QKHGADALPITLV--DGE---IAVSQTYPTTKQMSEWTG 102 (106)
T ss_dssp HHHTTCCCEEEETTTCTTHHHHSHHHHHHH-HTTCGGGCSEEEE--TTE---EEECSSCCCHHHHHHHHC
T ss_pred HHHCCCEEEEEccccChHHHhcCHHHHHHH-HHcCcccCCEEEE--CCE---EEEeccCCCHHHHHHHhC
Confidence 33347999999998872 2566 6899999998864 676 444454689999999873
No 373
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=51.13 E-value=12 Score=32.88 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=27.3
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeee-cCCCCCCHHHHHHHH
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIK-YPSERRDVDSLMAFV 460 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~-y~gg~~~~e~L~~fI 460 (464)
...+ ++++|.++||+++ +|+ .+. ..| ..+.++++++|
T Consensus 144 ~~~a-~~~GV~gtPtf~i--ng~--~~~~~s~-~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYA-RQNGIHVSPTFMI--NGL--VQPGMSS-GDPVSKWVSDI 181 (182)
T ss_dssp HHHH-HHHTCCSSSEEEE--TTE--ECTTCCT-TSCHHHHHHHH
T ss_pred HHHH-HHCCCCccCEEEE--CCE--EccCCCC-CCCHHHHHHHh
Confidence 3566 7899999999986 666 343 344 68888888876
No 374
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=49.16 E-value=5.1 Score=32.28 Aligned_cols=60 Identities=8% Similarity=-0.070 Sum_probs=48.5
Q ss_pred CcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012424 373 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 434 (464)
Q Consensus 373 k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~ 434 (464)
..+|..|-+-.-+-.+.....+.++.+.+-+..+.+-.||+.++ ++++ +.++|-.+||++
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~-PelA-e~~~IvAtPTLi 66 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKN-PQLA-EEDKILATPTLA 66 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC-CSCC-TTCEEECHHHHG
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccC-HhHH-hHCCeEEechhh
Confidence 34555565658888988888888876665554899999999999 9999 899999999975
No 375
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=45.65 E-value=13 Score=33.35 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=27.1
Q ss_pred HcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 423 QKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 423 ~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
++++|.++||+++ +|+ .+.| ..+.+.|.+.|+++
T Consensus 162 ~~~GV~GtPtfvv--ng~----~~~G-~~~~e~l~~~i~~~ 195 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI----LLAG-THDWASLRPQILAR 195 (205)
T ss_dssp HHHCCCSSSEEEE--TTE----ECTT-CCSHHHHHHHHHHH
T ss_pred HHcCCccCCEEEE--CCE----EEeC-CCCHHHHHHHHHHH
Confidence 4789999999987 555 2455 68999999999865
No 376
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=44.52 E-value=25 Score=28.47 Aligned_cols=52 Identities=13% Similarity=0.285 Sum_probs=38.9
Q ss_pred CCeEEEEEEcCCCc---------HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHH
Q 012424 404 NGVKVGKFRADGDQ---------KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 461 (464)
Q Consensus 404 ~~v~~~~Id~d~~~---------~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~ 461 (464)
.++.+.+.|...+. .++. +++++..+|.+++ +|+ +...|...+.++|.+|+.
T Consensus 39 ~Gi~V~RyNL~~~P~aF~~N~~V~~~L-~~~G~~~LP~~~V--DGe---vv~~G~yPt~eEl~~~lg 99 (110)
T 3kgk_A 39 SGVQIERFNLAQQPMSFVQNEKVKAFI-EASGAEGLPLLLL--DGE---TVMAGRYPKRAELARWFG 99 (110)
T ss_dssp HTCCEEEEETTTCTTHHHHSHHHHHHH-HHHCGGGCCEEEE--TTE---EEEESSCCCHHHHHHHHT
T ss_pred CCCeEEEEccccChHHHhcCHHHHHHH-HHcCcccCCEEEE--CCE---EEEeccCCCHHHHHHHhC
Confidence 46999999998872 2556 6889999998864 676 333444679999999873
No 377
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=43.38 E-value=22 Score=31.17 Aligned_cols=20 Identities=5% Similarity=0.225 Sum_probs=16.4
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCC
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
...+ ++++|.++||+++ +|+
T Consensus 135 ~~~a-~~~gv~GtPt~~v--ng~ 154 (189)
T 3l9v_A 135 ERLF-KEYGVRGTPSVYV--RGR 154 (189)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHhCCCccCEEEE--CCE
Confidence 4567 7899999999987 666
No 378
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=43.12 E-value=26 Score=32.14 Aligned_cols=39 Identities=8% Similarity=0.134 Sum_probs=29.0
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
...+ .+++|.++||+++ +|+ ..+.| ..+.+.|.+.|+++
T Consensus 173 ~~~a-~~~Gv~GvPtfvv--~g~---~~v~G-a~~~e~~~~~i~~~ 211 (239)
T 3gl5_A 173 EREA-AQLGATGVPFFVL--DRA---YGVSG-AQPAEVFTQALTQA 211 (239)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT---EEEES-SCCHHHHHHHHHHH
T ss_pred HHHH-HHCCCCeeCeEEE--CCc---EeecC-CCCHHHHHHHHHHH
Confidence 4556 6899999999986 554 23345 68899999888764
No 379
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=42.09 E-value=71 Score=27.92 Aligned_cols=59 Identities=10% Similarity=0.149 Sum_probs=39.7
Q ss_pred cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCC
Q 012424 374 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 374 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
+.+..||.++|+.|....=.++.. +-.+.+..+|.....+++. +......+|++. .+|.
T Consensus 5 ~~~~Ly~~~~sp~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~--~~g~ 63 (216)
T 3lyk_A 5 SVMTLFSNKDDIYCHQVKIVLAEK-----GVLYENAEVDLQALPEDLM-ELNPYGTVPTLV--DRDL 63 (216)
T ss_dssp -CEEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE--ETTE
T ss_pred ceEEEEeCCCChhHHHHHHHHHHc-----CCCcEEEeCCcccCcHHHH-hhCCCCCcCeEE--ECCe
Confidence 347788999999999977555543 3245666677654435666 566678899987 4553
No 380
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=41.22 E-value=15 Score=30.03 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=24.6
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 415 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~ 415 (464)
+..|+.|+|+.|++....+++- ++.|-.+|+.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-------gi~~~~~di~~ 38 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLENQ-------GIAPQVIKYLE 38 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-------TCCCEEECHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCceEEEEecc
Confidence 4567899999999998777651 46667777654
No 381
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=40.23 E-value=16 Score=32.27 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=28.6
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHHh
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 463 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~l 463 (464)
...+ .+++|.++||+++ +|+ .+.| ....+.|.+.|++.
T Consensus 157 ~~~a-~~~Gv~G~Ptfvi--~g~----~~~G-~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 157 THAA-IERKVFGVPTMFL--GDE----MWWG-NDRLFMLESAMGRL 194 (203)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHHH
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEEC-CCCHHHHHHHHhcc
Confidence 4566 7899999999887 554 3445 67888888888764
No 382
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=38.71 E-value=13 Score=29.34 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=19.1
Q ss_pred EEeCccCcHHHHHHHHHhcCCC
Q 012424 254 WNPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 254 ~~PI~dWt~~DVw~yi~~~~lp 275 (464)
-.|+..|+.+||..|++..++.
T Consensus 14 ~~~v~~Ws~edV~~WL~~~Gl~ 35 (97)
T 2d8c_A 14 MKEVVYWSPKKVADWLLENAMP 35 (97)
T ss_dssp CSCCSSCCTTHHHHHHHHTTCT
T ss_pred CCchhhCCHHHHHHHHHHcCCH
Confidence 4588999999999999998763
No 383
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=38.05 E-value=19 Score=32.08 Aligned_cols=20 Identities=20% Similarity=0.388 Sum_probs=15.9
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCC
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
...+ +.++|.++||+++ +|+
T Consensus 40 ~~~a-~~~gi~gvP~fvi--ngk 59 (197)
T 1un2_A 40 EKAA-ADVQLRGVPAMFV--NGK 59 (197)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHcCCCcCCEEEE--cce
Confidence 4567 7999999999966 565
No 384
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=35.15 E-value=7.6 Score=28.75 Aligned_cols=21 Identities=10% Similarity=0.129 Sum_probs=18.9
Q ss_pred EeCccCcHHHHHHHHHhcCCC
Q 012424 255 NPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~~lp 275 (464)
.|+.+||.+||-.|+...+++
T Consensus 2 ~~v~~Ws~~~V~~WL~~~gl~ 22 (74)
T 2gle_A 2 HMVHEWSVQQVSHWLVGLSLD 22 (74)
T ss_dssp CCGGGCCSGGGHHHHHHTTTH
T ss_pred CCcccCCHHHHHHHHHHCCCH
Confidence 388999999999999999864
No 385
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=34.88 E-value=28 Score=30.61 Aligned_cols=20 Identities=25% Similarity=0.424 Sum_probs=16.5
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCC
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
...+ ++++|.++||+++ +|+
T Consensus 141 ~~~a-~~~gv~gtPtfvv--nG~ 160 (191)
T 3l9s_A 141 EKAA-ADLQLQGVPAMFV--NGK 160 (191)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHhCCcccCEEEE--CCE
Confidence 4567 7999999999986 666
No 386
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=34.44 E-value=1e+02 Score=27.39 Aligned_cols=61 Identities=11% Similarity=0.103 Sum_probs=41.3
Q ss_pred CCcEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCC-CCCCEEEEEeCCC
Q 012424 372 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL-GSFPTILFFPKHS 440 (464)
Q Consensus 372 ~k~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I-~~~PTi~lf~~g~ 440 (464)
.+..+..||.+.|+.|....-.+++. +-.+.+..||.....+++. +.... ..+|++. .+|.
T Consensus 9 ~~~~~~Ly~~~~sp~~~~vr~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~nP~~g~vPvL~--~~g~ 70 (231)
T 4dej_A 9 KRSVMTLYSGKDDLKSHQVRLVLAEK-----GVGVEITYVTDESTPEDLL-QLNPYPEAKPTLV--DREL 70 (231)
T ss_dssp CCSSCEEEECSSCHHHHHHHHHHHHH-----TCBCEEEECCSSCCCHHHH-HHCCSSSCCSEEE--ETTE
T ss_pred CCceEEEEcCCCChHHHHHHHHHHHc-----CCCcEEEEcCcccCCHHHH-HhCCCCCCCCEEE--ECCE
Confidence 44567788999999999987666554 3235566666654436666 56667 7899997 4543
No 387
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=33.55 E-value=1.3e+02 Score=26.90 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=32.6
Q ss_pred CChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCC
Q 012424 383 WCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKH 439 (464)
Q Consensus 383 wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g 439 (464)
.|++|+...-.+.+. +-.+....||.....+++. +..-...+|++. .+|
T Consensus 23 ~sp~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~g~VPvL~--~~g 71 (241)
T 1k0m_A 23 NCPFSQRLFMVLWLK-----GVTFNVTTVDTKRRTETVQ-KLCPGGELPFLL--YGT 71 (241)
T ss_dssp SCHHHHHHHHHHHHH-----TCCCEEEEECTTSCCHHHH-HHCTTCCSSEEE--ETT
T ss_pred CCHHHHHHHHHHHHc-----CCccEEEEcCCcccHHHHH-HhCCCCCCCEEE--ECC
Confidence 899999877666543 3235667777654325666 566678899986 444
No 388
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=33.47 E-value=13 Score=27.75 Aligned_cols=18 Identities=17% Similarity=0.170 Sum_probs=16.5
Q ss_pred EeCccCcHHHHHHHHHhc
Q 012424 255 NPVANVKGNDIWNFLRTM 272 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~ 272 (464)
.|+..||.+||-.|+...
T Consensus 1 k~v~~Wt~~~V~~WL~~~ 18 (78)
T 3bs7_A 1 KAVYLWTVSDVLKWYRRH 18 (78)
T ss_dssp CCGGGCCHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHH
Confidence 388999999999999996
No 389
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=32.14 E-value=1.2e+02 Score=27.32 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=35.8
Q ss_pred ecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHH
Q 012424 380 YAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 459 (464)
Q Consensus 380 ya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~f 459 (464)
+.++|++|+...-.+++. +-.+.+..+|.....+++. +..-...+|++. .+|. .+ .+...|..|
T Consensus 26 ~~~~sp~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~g~vP~L~--~~g~--~l------~ES~aI~~Y 89 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWLK-----GVKFNVTTVDMTRKPEELK-DLAPGTNPPFLV--YNKE--LK------TDFIKIEEF 89 (247)
T ss_dssp SBCSCHHHHHHHHHHHHH-----TCCCEEEEECCC-----------CCSSSCEEE--ETTE--EE------CCHHHHHHH
T ss_pred cCCCChhHHHHHHHHHHc-----CCCcEEEEcCcccchHHHH-HhCCCCCCCEEE--ECCE--ec------cCHHHHHHH
Confidence 688999999887666543 2134556666543213444 444567899887 4443 11 234566666
Q ss_pred HHH
Q 012424 460 VDA 462 (464)
Q Consensus 460 I~~ 462 (464)
|.+
T Consensus 90 L~~ 92 (247)
T 2r4v_A 90 LEQ 92 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 390
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=31.34 E-value=1.5e+02 Score=25.62 Aligned_cols=54 Identities=17% Similarity=0.243 Sum_probs=35.5
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 434 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~ 434 (464)
.+..||.+.|++|....-.+++. +-.+.+..+|.+...+++. +......+|++.
T Consensus 10 ~~~Ly~~~~s~~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~ 63 (213)
T 1yy7_A 10 VMTLFSGPTDIFSHQVRIVLAEK-----GVSVEIEQVEADNLPQDLI-DLNPYRTVPTLV 63 (213)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHH-----TCCEEEEECCTTSCCHHHH-HHCTTCCSSEEE
T ss_pred ceEEEcCCCChhHHHHHHHHHHc-----CCCCeEEeCCcccCcHHHH-HHCCCCCCCEEE
Confidence 36778889999999876555543 3234555566544325666 556667899987
No 391
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=29.92 E-value=24 Score=27.31 Aligned_cols=20 Identities=25% Similarity=0.564 Sum_probs=17.5
Q ss_pred EeCccCcHHHHHHHHHhc-CC
Q 012424 255 NPVANVKGNDIWNFLRTM-DV 274 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~-~l 274 (464)
.|+..|+.+||..|+... ++
T Consensus 12 ~~v~~Ws~edV~~wL~~l~gl 32 (89)
T 1kw4_A 12 PPISSWSVDDVSNFIRELPGC 32 (89)
T ss_dssp CCGGGCCHHHHHHHHHTSTTC
T ss_pred CCchhCCHHHHHHHHHHCcCh
Confidence 488999999999999987 54
No 392
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=29.62 E-value=26 Score=26.38 Aligned_cols=22 Identities=14% Similarity=0.179 Sum_probs=19.4
Q ss_pred EEeCccCcHHHHHHHHHhcCCC
Q 012424 254 WNPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 254 ~~PI~dWt~~DVw~yi~~~~lp 275 (464)
-.|+..|+.+||-.++...+++
T Consensus 4 ~~~v~~Ws~~~V~~WL~~lgl~ 25 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHLSLC 25 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHTTCG
T ss_pred CCChhhCCHHHHHHHHHHCCCH
Confidence 4589999999999999999975
No 393
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=29.21 E-value=1.9e+02 Score=26.38 Aligned_cols=67 Identities=16% Similarity=0.100 Sum_probs=41.5
Q ss_pred ecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHH
Q 012424 380 YAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 459 (464)
Q Consensus 380 ya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~f 459 (464)
+.++|++|+...-.+++. +-.+.+..+|.....+++. +..-...+|++. .+|. . - .+...|..|
T Consensus 31 ~~~~~p~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~gkVPvL~--~~g~--~-l-----~ES~aI~~Y 94 (267)
T 2ahe_A 31 SIGNCPFSQRLFMILWLK-----GVVFSVTTVDLKRKPADLQ-NLAPGTHPPFIT--FNSE--V-K-----TDVNKIEEF 94 (267)
T ss_dssp SBCSCHHHHHHHHHHHHH-----TCCCEEEEECTTSCCHHHH-HHSTTCCSCEEE--ETTE--E-E-----CCHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHc-----CCCCEEEEeCcccChHHHH-HhCCCCCCCEEE--ECCE--E-e-----cCHHHHHHH
Confidence 578999999877666543 2235566677654325565 566677899987 3443 1 1 244567777
Q ss_pred HHH
Q 012424 460 VDA 462 (464)
Q Consensus 460 I~~ 462 (464)
|.+
T Consensus 95 L~~ 97 (267)
T 2ahe_A 95 LEE 97 (267)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 394
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=27.28 E-value=1.5e+02 Score=27.69 Aligned_cols=67 Identities=12% Similarity=0.111 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHc-CCcEEEEechhHH--HHHHHHHHHcCCCeEEEEEe-CCC--CcHHHHHHHHHHHH---HhCCc
Q 012424 100 PLEIMDRALEKF-GNDIAIAFSGAED--VALIEYAHLTGRPFRVFSLD-TGR--LNPETYRFFDEVEK---HFGIR 166 (464)
Q Consensus 100 ~~eil~~a~~~~-~~~i~vafSGGKD--S~ll~L~~~~~~~i~vv~~D-Tg~--~fpeT~~~~~~~~~---~~gl~ 166 (464)
--+.++.+++.+ |..++-+.||++| --++.++.+.+.++-+.+.| .|. ...+.++++++..+ ++|++
T Consensus 87 ~~~v~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~ 162 (271)
T 2yci_X 87 NPDAIEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIP 162 (271)
T ss_dssp CHHHHHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 348888899886 4557778999888 56778888988888888876 332 24455666555433 45876
No 395
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=27.04 E-value=75 Score=27.75 Aligned_cols=28 Identities=11% Similarity=0.110 Sum_probs=24.9
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhc
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLA 402 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~ 402 (464)
.|..|+-.-||+|-...+.++++.+.+.
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~ 29 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYG 29 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcC
Confidence 3677888999999999999999999985
No 396
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=26.66 E-value=1.7e+02 Score=25.25 Aligned_cols=57 Identities=16% Similarity=0.222 Sum_probs=35.5
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCC
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
+..||.+.|+.|....=.++.. +-.+.+..+|.....+++. +......+|++. .+|.
T Consensus 9 ~~Ly~~~~s~~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~--~~g~ 65 (215)
T 3lyp_A 9 LACYSDPADHYSHRVRIVLAEK-----GVSAEIISVEAGRQPPKLI-EVNPYGSLPTLV--DRDL 65 (215)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECC---CCHHHH-HHCTTCCSSEEE--CC-C
T ss_pred eEEEeCCCCchHHHHHHHHHHC-----CCCcEEEecCcccccHHHH-HHCCCCCcCeEE--ECCE
Confidence 5668889999999877655544 3234555555543325666 666778899986 4443
No 397
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=26.65 E-value=81 Score=28.03 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=18.9
Q ss_pred cCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 012424 381 APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 415 (464)
Q Consensus 381 a~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~ 415 (464)
.+|||+|.+..=.|. +++-.+....||...
T Consensus 19 ~~~SP~~~kvr~~L~-----~kgi~y~~~~v~~~~ 48 (253)
T 4f03_A 19 SPWSPNTWKIRYALN-----YKGLKYKTEWVEYPD 48 (253)
T ss_dssp CCCCHHHHHHHHHHH-----HHTCCEEEEECCGGG
T ss_pred CCcChhHHHHHHHHH-----HcCCCCEEEEEcccc
Confidence 789999999875554 344234555555543
No 398
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=26.31 E-value=42 Score=29.56 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=27.8
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
...+ .+++|.++||+++ +|+ .+.| ....+.|.++|.+
T Consensus 163 ~~~a-~~~Gv~GvPtfvv--~g~----~~~G-~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 163 GEDA-VARGIFGSPFFLV--DDE----PFWG-WDRMEMMAEWIRT 199 (202)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHT
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEec-CCCHHHHHHHHhc
Confidence 4556 6899999999987 554 3445 6788888888864
No 399
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=25.71 E-value=1.4e+02 Score=25.79 Aligned_cols=56 Identities=11% Similarity=0.161 Sum_probs=36.8
Q ss_pred EEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCC
Q 012424 377 VVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 440 (464)
Q Consensus 377 V~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf~~g~ 440 (464)
-.|+.+.||+|++..=.+++. +-.+.+..||......++. +..-...+|++. .+|.
T Consensus 5 ~LY~~~~sP~~~rvr~~L~e~-----gi~~e~~~v~~~~~~~~~~-~~nP~g~vPvL~--~~~~ 60 (210)
T 4hoj_A 5 TLYSGITCPFSHRCRFVLYEK-----GMDFEIKDIDIYNKPEDLA-VMNPYNQVPVLV--ERDL 60 (210)
T ss_dssp EEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE--ETTE
T ss_pred EEecCCCChHHHHHHHHHHHc-----CCCCEEEEeCCCCCCHHHH-HHCCCCCCcEEE--ECCE
Confidence 456789999999876555443 3235666777665535566 556678899986 4544
No 400
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=25.39 E-value=2.2e+02 Score=22.19 Aligned_cols=74 Identities=5% Similarity=-0.081 Sum_probs=49.2
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEE-eCCCCCeeecCCCCC
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGSFPTILFF-PKHSSKPIKYPSERR 451 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~--~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~lf-~~g~~~~~~y~gg~~ 451 (464)
-|...|-+|.+.++.+...+..-...++. .++.|... .. -..-|.+..+ .+|..+.+...+ .
T Consensus 21 ~l~~~yc~~~~sS~G~R~Fl~~~l~~~k~~NP~v~i~v~---~~----------~~~~P~i~a~Y~~G~ek~i~l~n--~ 85 (102)
T 1s3a_A 21 EIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIR---EC----------SDVQPKLWARYAFGQETNVPLNN--F 85 (102)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHTHHHHHHHSTTCCEEEE---CC----------CSSSCEEEEEESSCCEEEEECTT--C
T ss_pred EEEEEEcCCCCCchhHHHHHHHhhHHHHHHCCCceEEEE---EC----------CCCCCEEEEEECCCCEEEEECCC--C
Confidence 57778889999888888777644433322 24665532 22 0257877765 577755666654 8
Q ss_pred CHHHHHHHHHHh
Q 012424 452 DVDSLMAFVDAL 463 (464)
Q Consensus 452 ~~e~L~~fI~~l 463 (464)
+.++|.+.|+.|
T Consensus 86 s~~eI~~~l~~l 97 (102)
T 1s3a_A 86 SADQVTRALENV 97 (102)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999999876
No 401
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=24.37 E-value=30 Score=26.73 Aligned_cols=22 Identities=9% Similarity=0.140 Sum_probs=19.5
Q ss_pred EEEeCccCcHHHHHHHHHhcCC
Q 012424 253 KWNPVANVKGNDIWNFLRTMDV 274 (464)
Q Consensus 253 k~~PI~dWt~~DVw~yi~~~~l 274 (464)
.-.|+..|+.+||-.+|...++
T Consensus 13 ~~~~v~~Wt~~dV~~WL~~~gl 34 (91)
T 1v85_A 13 VHKAVDKWTTEEVVLWLEQLGP 34 (91)
T ss_dssp HHSCGGGCCHHHHHHHHHHHCG
T ss_pred CCCCcccCCHHHHHHHHHHcCC
Confidence 3468899999999999999887
No 402
>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*
Probab=23.22 E-value=1.2e+02 Score=28.12 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=32.2
Q ss_pred cEEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCCCCEEEE
Q 012424 374 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILF 435 (464)
Q Consensus 374 ~vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d--~~~~~l~~~~~~I~~~PTi~l 435 (464)
.-+..|+.++|+.|....-.+++. ++.+-.++++ .. .++ +......+|++..
T Consensus 13 ~~~~Ly~~~~sp~~~~v~~~L~~~-------gi~~~~~~v~~~~~-~~~--~~~p~~~vP~l~~ 66 (290)
T 1z9h_A 13 LQLTLYQYKTCPFCSKVRAFLDFH-------ALPYQVVEVNPVLR-AEI--KFSSYRKVPILVA 66 (290)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHT-------TCCEEEEECCTTTC-GGG--TTCSCCSSCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHc-------CCCeEEEECChhhH-HHH--HHcCCCCCCEEEE
Confidence 446778889999999877665543 2444444443 22 232 2445568998864
No 403
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=23.20 E-value=64 Score=28.24 Aligned_cols=52 Identities=12% Similarity=0.211 Sum_probs=35.0
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 434 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~ 434 (464)
+..|+.+.|++|....-.+++. +-.+....||.... .... +......+|++.
T Consensus 4 ~~Ly~~~~sp~~~~v~~~l~~~-----gi~~~~~~v~~~~~-~~~~-~~~p~~~vP~l~ 55 (218)
T 3ir4_A 4 MKLYIYDHCPFCVKARMIFGLK-----NIPVELNVLQNDDE-ATPT-RMIGQKMVPILQ 55 (218)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTCC-HHHH-HHHSSSCSCEEE
T ss_pred EEEEcCCCCchHHHHHHHHHHc-----CCceEEEECCCcch-hhhh-hcCCCceeeeEE
Confidence 4568889999999887665543 22356666676655 4444 455667899886
No 404
>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*
Probab=22.65 E-value=2.1e+02 Score=24.83 Aligned_cols=53 Identities=11% Similarity=0.080 Sum_probs=34.7
Q ss_pred EEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEE
Q 012424 376 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 435 (464)
Q Consensus 376 lV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~l 435 (464)
+..+|.++|++|....-.++.. +-.+....|+.+.. +++. +......+|++..
T Consensus 3 ~~Ly~~~~sp~~~~v~~~L~~~-----gi~ye~~~v~~~~~-~~~~-~~~P~g~vP~L~~ 55 (229)
T 3lxz_A 3 LKLYGFSVSNYYNMVKLALLEK-----GLTFEEVTFYGGQA-PQAL-EVSPRGKVPVLET 55 (229)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCEEEEECCCCSC-HHHH-TTSTTSCSCEEEE
T ss_pred EEEEeCCCCchHHHHHHHHHHc-----CCCCEEEecCCCCC-HHHH-hhCCCCCcCeEEe
Confidence 5678899999999876555543 32344444544444 6676 6666778999863
No 405
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.44 E-value=36 Score=26.95 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=19.9
Q ss_pred EEeCccCcHHHHHHHHHhcCCC
Q 012424 254 WNPVANVKGNDIWNFLRTMDVP 275 (464)
Q Consensus 254 ~~PI~dWt~~DVw~yi~~~~lp 275 (464)
-.++..|+.+||-.||...++.
T Consensus 24 ~~~v~~Ws~~~V~~WL~~lgl~ 45 (103)
T 2e8o_A 24 HPDYKTWGPEQVCSFLRRGGFE 45 (103)
T ss_dssp CSCGGGCHHHHHHHHHHHHTCC
T ss_pred ccChhhCCHHHHHHHHHHcCCC
Confidence 4688999999999999999986
No 406
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=22.30 E-value=1.9e+02 Score=25.50 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=37.6
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEE
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 435 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I~~~PTi~l 435 (464)
.+..|+.++|++|....=.+++. +-.+.+..||......++. +......+|++..
T Consensus 23 ~~~Ly~~~~sp~~~~v~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~~P~g~vP~L~~ 77 (241)
T 3vln_A 23 SIRIYSMRFSPFAERTRLVLKAK-----GIRHEVININLKNKPEWFF-KKNPFGLVPVLEN 77 (241)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHH-----TCCEEEEEBCTTSCCTTHH-HHCTTCCSCEEEC
T ss_pred eEEEEcCCCCcHHHHHHHHHHHc-----CCCCeEEecCcccCCHHHH-HhCCCCCCCEEEE
Confidence 46778889999999987666654 2235566666655423455 5666778999853
No 407
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=22.23 E-value=2.1e+02 Score=26.52 Aligned_cols=66 Identities=17% Similarity=0.279 Sum_probs=44.6
Q ss_pred HHHHHHHHHHc-CCcEEEEechhHHH--HHHHHHHHcCCCeEEEEEe-CCC--CcHHHHHHHHHH---HHHhCCc
Q 012424 101 LEIMDRALEKF-GNDIAIAFSGAEDV--ALIEYAHLTGRPFRVFSLD-TGR--LNPETYRFFDEV---EKHFGIR 166 (464)
Q Consensus 101 ~eil~~a~~~~-~~~i~vafSGGKDS--~ll~L~~~~~~~i~vv~~D-Tg~--~fpeT~~~~~~~---~~~~gl~ 166 (464)
-+.++.+++.+ |..++-..||++|- -++.++.+.+.++.+++.| .|. ...+..++.++. +...|++
T Consensus 79 ~~v~~aAl~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 79 IKAIEAGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 47888889886 55577788998886 6788899988877777775 332 233444444443 3456875
No 408
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=21.96 E-value=71 Score=28.92 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=29.0
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHHHH
Q 012424 418 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 462 (464)
Q Consensus 418 ~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI~~ 462 (464)
...+ .+++|.++||+++=.+|+ ...+.| ....+.|.++|.+
T Consensus 172 ~~~a-~~~Gv~GvPtfvv~~~g~--~~~f~G-~drl~~l~~~L~~ 212 (234)
T 3rpp_A 172 TEAA-CRYGAFGLPITVAHVDGQ--THMLFG-SDRMELLAHLLGE 212 (234)
T ss_dssp HHHH-HHTTCSSSCEEEEEETTE--EEEEES-SSCHHHHHHHHTC
T ss_pred HHHH-HHcCCCCCCEEEEeCCCC--cCceeC-ccCHHHHHHHhcc
Confidence 4566 688999999997722564 345556 5778888888753
No 409
>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5
Probab=21.89 E-value=1.6e+02 Score=25.73 Aligned_cols=54 Identities=11% Similarity=-0.038 Sum_probs=33.9
Q ss_pred EEEEEecCCChhHHhhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCC-CCCCEEE
Q 012424 375 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL-GSFPTIL 434 (464)
Q Consensus 375 vlV~Fya~wC~~C~~~~p~~~~la~~~~~~~v~~~~Id~d~~~~~l~~~~~~I-~~~PTi~ 434 (464)
-+..|+.++|+.|....-.+++. +-.+....+|.....+++. +..-. ..+|++.
T Consensus 6 ~~~Ly~~~~sp~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~nP~~g~vP~L~ 60 (230)
T 1gwc_A 6 DLKLLGAWPSPFVTRVKLALALK-----GLSYEDVEEDLYKKSELLL-KSNPVHKKIPVLI 60 (230)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHSTTTCCSCEEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHc-----CCCCeEEecccccCCHHHH-hhCCCCCccCEEE
Confidence 35677889999999876555543 2234556666543324555 44444 5799986
No 410
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=21.71 E-value=90 Score=27.82 Aligned_cols=40 Identities=13% Similarity=0.023 Sum_probs=0.0
Q ss_pred cHHHHHHcCCCCCCCEEEEEeCCCCCeeecCCCCCCHHHHHHHH
Q 012424 417 QKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 460 (464)
Q Consensus 417 ~~~l~~~~~~I~~~PTi~lf~~g~~~~~~y~gg~~~~e~L~~fI 460 (464)
+...+ .+++|.++||+++=.+|+ ...+.| ....+.|.++|
T Consensus 171 ~~~~a-~~~gv~G~Ptfvv~~~g~--~~~~~G-~~~~~~l~~~l 210 (226)
T 1r4w_A 171 TTGAA-CKYGAFGLPTTVAHVDGK--TYMLFG-SDRMELLAYLL 210 (226)
T ss_dssp HHHHH-HHTTCCSSCEEEEEETTE--EEEEES-TTCHHHHHHHH
T ss_pred HHHHH-HHCCCCCCCEEEEeCCCC--cCceeC-CCcHHHHHHHh
No 411
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=20.97 E-value=46 Score=24.73 Aligned_cols=19 Identities=16% Similarity=0.522 Sum_probs=16.8
Q ss_pred EeCccCcHHHHHHHHHhcC
Q 012424 255 NPVANVKGNDIWNFLRTMD 273 (464)
Q Consensus 255 ~PI~dWt~~DVw~yi~~~~ 273 (464)
.|+..||.+||-.|+...+
T Consensus 2 ~~v~~Ws~~~V~~WL~~l~ 20 (80)
T 3bs5_B 2 EPVSKWSPSQVVDWMKGLD 20 (80)
T ss_dssp CCGGGCCHHHHHHHHHTSC
T ss_pred CccccCCHHHHHHHHHHHh
Confidence 4899999999999999764
No 412
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=20.21 E-value=2.9e+02 Score=22.12 Aligned_cols=71 Identities=7% Similarity=0.016 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCcEEEEechhHHHHHHHHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHh-CCcEEEEcCC
Q 012424 101 LEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD 173 (464)
Q Consensus 101 ~eil~~a~~~~~~~i~vafSGGKDS~ll~L~~~~~~~i~vv~~DTg~~fpeT~~~~~~~~~~~-gl~i~~~~p~ 173 (464)
.+.|+..+...+-.++..++.+++.. .++....+.+.++++|....--..+++++++.+.. .+++.++...
T Consensus 49 ~~~l~~~L~~~g~~v~~~~~~~~~al--~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 49 VKQLTQIFTSEGFNIIDTAADGEEAV--IKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHH--HHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHH--HHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 45566666666654542555555533 33444433456888888765555677888887765 4666666543
Done!