BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012425
(464 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NKX5|POT1B_ARATH Protection of telomeres protein 1b OS=Arabidopsis thaliana GN=POT1B
PE=1 SV=1
Length = 454
Score = 348 bits (892), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 192/467 (41%), Positives = 286/467 (61%), Gaps = 28/467 (5%)
Query: 6 EDYRFLKIKDAILSINQKVSFVGVILEVGSPKQSKGTDSFCTIKVTDESHTKDGISVNIF 65
+DY+FL+I+DA +++ V+ +GVI+E+G S G+D CT+K+ D ++ G+ V
Sbjct: 7 DDYKFLRIQDAFKALHLHVNLIGVIVELGF---SNGSDCSCTLKIVDPWYSGSGLPVKFV 63
Query: 66 AESMEKLPYIVSVGDIILLSHVVMKAHNKQAYALFNKKFSS-FALYDGKGGEDFLPYQVS 124
A ++ LP + S+GDIILLS V + N++ AL N+ SS FAL++GK D +PYQ S
Sbjct: 64 ARTIRDLPRVESIGDIILLSRVKIVLINRKITALCNETTSSSFALFNGKHSVDSIPYQSS 123
Query: 125 SRFFVRDQDKRIIAAVRKWLLNFQFKEDSKKFLLLREIKDGQRINMACKVFHICEVAKGE 184
+F +R+QDK ++ +R+W++ ++F++ S F L++IK+G+ N++C++ HI +V K
Sbjct: 124 PKFLMREQDKNFLSNLREWMITYKFEDGSCCFTSLKDIKEGECSNLSCQIVHISKVYKDR 183
Query: 185 WMAFVWDGTDAPPAQISKKLEDEMDHELPLQVEPLPLSRDILCSFPAVGSILRVIIDKGI 244
W FVWDGT+ PP I K E LPL VEP L +L FP GS+LR+I+D+
Sbjct: 184 WYLFVWDGTEMPPCNILVKSE-----RLPLCVEPEMLPTYMLRKFPTFGSVLRIIVDRVS 238
Query: 245 EKHILHLLKIGKWVKLQNVLCQVDAGLWFGVLTHFTRLRYVPTNDNLIVERQRSYDERLS 304
EK +H L+ G+ VKL N+ QV+ GLW T T+++Y + + QR E+ S
Sbjct: 239 EKQAIHCLQPGQHVKLLNLFFQVNMGLWNATFTPSTKMQYTMSREMEAFSPQRMCGEKFS 298
Query: 305 WEHSRMPYW-----CFPWT-SEVTDIDYSEDGPFVTLKDVLTHSQVTAKFKCVVRVVAAL 358
P W C + SE+T + + +D PFV+L D+LT+ VTAKF+CVVR +
Sbjct: 299 ------PRWNPIARCISRSHSEITGVAH-DDAPFVSLMDILTYHNVTAKFRCVVRFIQVY 351
Query: 359 PWRSEDFCSPLGNYRIRLTLEDPTARIHAFVYAEDGEKLFG-GYPFVDVLKRKINKLLGV 417
P GN ++ LED TARIHA +YA++GEK FG + L +K+N+LLG
Sbjct: 352 PRDVRKLRDINGNIKLVAILEDATARIHASLYADEGEKFFGCDESDEEALVKKLNRLLG- 410
Query: 418 AVSDGQEIKDAPRNPPWVQCCLKSYYIDRNDIWGSRQYRIFDTKISG 464
G+E++ PRNPPWVQCCL S+Y + D W SR++RIFDT I+
Sbjct: 411 ----GEEMEKVPRNPPWVQCCLFSFYKHKMDQWESRRFRIFDTWINA 453
>sp|Q56Y52|POT1A_ARATH Protection of telomeres protein 1a OS=Arabidopsis thaliana GN=POT1A
PE=1 SV=1
Length = 467
Score = 333 bits (854), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/480 (38%), Positives = 289/480 (60%), Gaps = 33/480 (6%)
Query: 1 MDYNGEDYRFLKIKDAILSINQKVSFVGVILEVGSPKQSKGTDSFCTIKVTDESHTKDGI 60
M E + +KIKDAI INQ+VS +G++LE PKQ + D CT+++ D+++ G+
Sbjct: 1 MAKKRESPKLIKIKDAIKLINQQVSLIGIVLEQREPKQCRNNDWICTLRIIDDTYPSPGL 60
Query: 61 SVNIFAESMEKLPYIVSVGDIILLSHVVMKAHN--KQAYALFNKKFSSFALYDGKGGEDF 118
+VN+F++++E+LP I + D+IL + + M+ + ++ A ++ SSFAL++G DF
Sbjct: 61 TVNVFSKTLEQLPQIKNHDDMILFTRIKMQTFDSGERVNAACSRWVSSFALFEGV---DF 117
Query: 119 LPYQVSSRFF--------VRDQDKRIIAAVRKWL-----LNFQFKEDSKKFLLLREIKDG 165
+ YQ S+ F D +++ A + + ++++ K S+ F LREIK G
Sbjct: 118 VCYQCSTNFHEEEALYKSAMDDLRKVFAGCSQVIKAMQSISYRTKPCSEVFSFLREIKIG 177
Query: 166 QRINMACKVFHICEVAKGEWMAFVWDGTDAPPAQISKKLEDEMDHELPLQVEPLPLSRDI 225
+R ++ C++ H E FVWDGTDAPPA I K +E L V L LSRD+
Sbjct: 178 KRFDLVCRILHADEDTSA---VFVWDGTDAPPASILAKRSEEDKAFSSLSVHTL-LSRDV 233
Query: 226 LCSFPAVGSILRVIIDKGIEKHILHLLKIGKWVKLQNVLCQVDAGLWFGVLTHFTRLRYV 285
L SFP VG+ILRV + H+ + +K G WVKL ++LC+VD G W +T T++ ++
Sbjct: 234 LLSFPTVGTILRV----HLSSHLFYRVKPGDWVKLYHLLCEVDRGSWVIKVTSSTKVHHL 289
Query: 286 PTNDNLIVERQRSYDERLSWEHSRMPYWCFPWTSEVTDIDYSEDGPFVTLKDVLTHSQVT 345
+D L+ + R YD+RLS + + +WCFP +T+ D PFVTL D++T +VT
Sbjct: 290 AQDDRLVEKIMRIYDKRLSSKLGHISFWCFPSPPGLTETD-DNCAPFVTLMDIITFPKVT 348
Query: 346 AKFKCVVRVVAALPWRSEDFCSPLG--NYRIRLTLEDPTARIHAFVYAEDGEKLFG-GYP 402
K++C+VRVVAA PW+ EDFCS ++++ LTLED TA + AF+ +D E +G G+
Sbjct: 349 CKYRCIVRVVAAYPWQVEDFCSDENRRHHQVLLTLEDSTATLEAFLCNKDAEYFWGLGFQ 408
Query: 403 FVDVLKRKINKLLGVAVSDGQEIKDAPRNPPWVQCCLKSYYIDRNDIWGSRQYRIFDTKI 462
+ L++K N LLG+ S APRNPPW++CC+ SYY ++ D W +R YRIF T++
Sbjct: 409 DTETLRKKRNWLLGIRESSNFV---APRNPPWIECCILSYYTNKADPWNTRLYRIFGTRL 465
>sp|A9JTY4|POT1C_ARATH Protection of telomeres protein 1c OS=Arabidopsis thaliana GN=POT1C
PE=2 SV=2
Length = 144
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 59/195 (30%)
Query: 9 RFLKIKDAILSINQKVSFVGVILEVGSPKQSKGTDSFCTIKVTDESHTKDGISVNIFAES 68
+ +KIKDAI INQ+VS +G++LE PKQ + D CT+++ D+++ G++VN+++ +
Sbjct: 9 KLIKIKDAIKLINQEVSLIGIVLEQREPKQCRNNDWICTLRIIDDTYPSPGLTVNVYSRT 68
Query: 69 MEKLPYIVSVGDIILLSHVVMKAHNKQAYALFNKKFSSFALYDGKGGEDFLPYQVSSRFF 128
+E+LP I + D+IL + + M+
Sbjct: 69 LEQLPQIKNHDDMILFTRIKMQTF------------------------------------ 92
Query: 129 VRDQDKRIIAAVRKWLLNFQFKEDSKKFLLLREIKDGQRINMACKVFHICEVAKGEWMAF 188
D KR+ AA +W+ +F E L+L +D + F
Sbjct: 93 --DSGKRVNAACSRWVSSFALFEGED--LILHADEDTSAV-------------------F 129
Query: 189 VWDGTDAPPAQISKK 203
VWDGTDAPPA I K
Sbjct: 130 VWDGTDAPPASILAK 144
>sp|Q9NUX5|POTE1_HUMAN Protection of telomeres protein 1 OS=Homo sapiens GN=POT1 PE=1 SV=1
Length = 634
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Query: 24 VSFVGVILEVGSPKQSKGTDSFCTIKVTDESHTKDGISVNIFAESMEKLPYIVSVGDIIL 83
V+ GV+ P SKGTD + + D+++ K ++ +F+ + E LP I GDI+
Sbjct: 23 VNVYGVVKFFKPPYLSKGTDYCSVVTIVDQTNVK--LTCLLFSGNYEALPIIYKNGDIVR 80
Query: 84 LSHVVMKAHNKQAYALFNKKFSSFALYDGKGGEDFLPYQVSSRFFVRDQDKRIIAAVRKW 143
+ ++ + K+ + + F+S ++G G +P S F +D +++ A+R W
Sbjct: 81 FHRLKIQVYKKETQGITSSGFASLT-FEGTLGAPIIPRTSSKYFNFTTEDHKMVEALRVW 139
Query: 144 LLNFQFKEDSKKFLLLREIKDGQRINMACKVFHICEVAKGEWMAFVWDGTDAP 196
S L L +++ Q ++ C++ EV ++ VWDGT P
Sbjct: 140 ASTHM--SPSWTLLKLCDVQPMQYFDLTCQLLGKAEVDGASFLLKVWDGTRTP 190
>sp|Q95K48|POTE1_MACFA Protection of telomeres protein 1 OS=Macaca fascicularis GN=POT1
PE=2 SV=1
Length = 634
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Query: 24 VSFVGVILEVGSPKQSKGTDSFCTIKVTDESHTKDGISVNIFAESMEKLPYIVSVGDIIL 83
V+ GV+ P SKGTD + + D+++ K ++ +F+ + E LP I GDI+
Sbjct: 23 VNVYGVVKFFKPPYLSKGTDYCSVVTIVDQTNVK--LTCLLFSGNYEALPIIYKNGDIVR 80
Query: 84 LSHVVMKAHNKQAYALFNKKFSSFALYDGKGGEDFLPYQVSSRFFVRDQDKRIIAAVRKW 143
+ ++ + K+ + + F+S ++G G +P S F +D +++ +R W
Sbjct: 81 FHRLKIQVYKKETQGITSSGFASLT-FEGTLGAPIIPRTSSKYFNFTTEDHKMVETLRVW 139
Query: 144 LLNFQFKEDSKKFLLLREIKDGQRINMACKVFHICEVAKGEWMAFVWDGTDAP 196
S L L +++ Q ++ C++ EV ++ VWDGT P
Sbjct: 140 ASTHM--SPSWTLLKLCDVQPMQYFDLTCQLLGKAEVDGASFLLKVWDGTRTP 190
>sp|P62597|POTE1_CHICK Protection of telomeres protein 1 OS=Gallus gallus GN=POT1 PE=1
SV=1
Length = 778
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 24 VSFVGVILEVGSPKQSKGTDSFCTIKVTDESHTKDGISVNIFAESMEKLPYIVSVGDIIL 83
V+ G++ P SKGTD + + D+S+ K ++ +F +++ LP I GDI+
Sbjct: 167 VNLYGIVKFFKPPYISKGTDYCSVVTLVDQSNVK--LTCTLFNGNLDSLPKIYKNGDIVR 224
Query: 84 LSHVVMKAHNKQAYALFNKKFSSFALYDGKGGEDFLPYQVSSRFFVRDQDKRIIAAVRKW 143
V ++ +N Q + + F+S +DG G +P S + D++++ + +R W
Sbjct: 225 FHRVKIREYNGQMQGITSAGFASLT-FDGTVGAPVVPRASSKVYTFVDEEQKTVEELRIW 283
Query: 144 LL-NFQFKEDSKKFLLLREIKDGQRINMACKVFHICEVAKGEWMAFVWDGTDAP 196
N K L ++K ++ C++ +V ++ VWDGT P
Sbjct: 284 AASNLSVSGPEAK---LSDVKPMMFFDLTCQLVGKAKVDGSSFLLKVWDGTKCP 334
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 13/97 (13%)
Query: 372 YRIRLTLEDPTARIHAFVYAEDGEKLFGGYPFVDVL-----KRKINKLLGVAVSDGQEIK 426
+ ++ TL D T ++A+++ D EK F P ++L ++K+ + G+++
Sbjct: 686 FVMKFTLVDGTGVLNAYLF--DYEKFFQ-IPASEILTNSFLQQKMEMTMNTLSPPGRKLD 742
Query: 427 DAPRNPPWVQCCLKSYYIDRNDIWGSRQYRIFDTKIS 463
D P W++C +KSY + + + Y+IFDT ++
Sbjct: 743 DLP----WLECFIKSYNV-ADGMKHQVYYQIFDTTVA 774
>sp|Q91WC1|POTE1_MOUSE Protection of telomeres protein 1 OS=Mus musculus GN=Pot1 PE=2 SV=1
Length = 640
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 28 GVILEVGSPKQSKGTDSFCTIKVTDESHTKDGISVNIFAESMEKLPYIVSVGDIILLSHV 87
GV+ P SKGTD + + D+++ K ++ +F+ + E LP I VGDI+ +
Sbjct: 27 GVVKFFKPPYVSKGTDYCSVVTIVDQTNVK--LTCMLFSGNYEALPIIYKVGDIVRFHRL 84
Query: 88 VMKAHNKQAYALFNKKFSSFALYDGKGGEDFLPYQVSSRFFVRDQDKRIIAAVRKWLLNF 147
++ + + + F+S ++G G S F QD++++ A+R W
Sbjct: 85 KIQVYKNELQGINCSGFASLT-FEGTVGMPVTARTSSKVFSFTPQDQKMVEALRVW--AS 141
Query: 148 QFKEDSKKFLLLREIKDGQRINMACKVFHICEVAKGEWMAFVWDGTDA 195
+ S + L + + Q ++ C++ +V ++ VWDGT
Sbjct: 142 KHISASSTLVQLCDAQPMQYYDLTCQLLGKAQVDSTAFLLKVWDGTQT 189
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 359 PWRSEDFCSPLGNYRIR------LTLEDPTARIHAFVYAEDGEKLFGGYPFVDVL----- 407
PW LG ++ TL+D T + A Y +D E F P +VL
Sbjct: 529 PWTPSSVAEALGVVPLQYVFVMVFTLDDGTGVLEA--YLKDSEHFFK-IPASEVLTDDDL 585
Query: 408 KRKINKLLGVAVSDGQEIKDAPRNPPWVQCCLKSYYIDRNDIWGSRQ--YRIFDTKIS 463
+R + ++ + G ++ DA PW++C LKSY + I R+ Y+IFDT ++
Sbjct: 586 QRSLETIMDMICPPGIKV-DAY---PWLECLLKSYNV---TIGTERRICYQIFDTTVA 636
>sp|P29550|TEBA_STYMY Telomere-binding protein subunit alpha OS=Stylonychia mytilis
GN=STY56V PE=3 SV=1
Length = 493
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 30/167 (17%)
Query: 8 YRFLKIKDAILSINQKVSFVGVILEVGSPKQSKGTDSFCTIKVTDES----------HTK 57
Y+++++ A L+ + F GV+++ P ++ C++KV D S
Sbjct: 33 YKYVELNKASLTSAEAQHFYGVVIDATFPYKTNQERYICSLKVVDPSLYLKSQKGTGDAS 92
Query: 58 DGISVNIFAESMEKLPYIVSVGDIILLSHVVMKAHNKQ----AYALFNKKFSSFALY--D 111
D ++ ++A+ E LP I +GDII + ++ +N Q A +N SS+AL+ D
Sbjct: 93 DYATLVLYAKRFEDLPIIHRIGDIIRVHRATLRLYNGQRQFNANVFYN---SSWALFSTD 149
Query: 112 GK------GGE----DFLPYQVSSRFFVRDQ-DKRIIAAVRKWLLNF 147
K GG+ D P+ S + + ++ + ++ +RKW + +
Sbjct: 150 KKSALQEIGGQEPASDLTPFAFSGKNYTFEKSEAALLQNIRKWAVQY 196
>sp|P29549|TEBA_OXYNO Telomere-binding protein subunit alpha OS=Oxytricha nova GN=MAC-56A
PE=1 SV=1
Length = 495
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 5 GEDYRFLKIKDAILSINQKVSFVGVILEVGSPKQSKGTDSFCTIKVTDES---------- 54
G Y ++++ A L+ Q F V+++ P ++ C++K+ D +
Sbjct: 33 GHKYEYVELAKASLTSAQPQHFYAVVIDATFPYKTNQERYICSLKIVDPTLYLKQQKGAG 92
Query: 55 HTKDGISVNIFAESMEKLPYIVSVGDIILLSHVVMKAHNKQ-----------AYALF--N 101
D ++ ++A+ E LP I GDII + ++ +N Q ++ALF +
Sbjct: 93 DASDYATLVLYAKRFEDLPIIHRAGDIIRVHRATLRLYNGQRQFNANVFYSSSWALFSTD 152
Query: 102 KKFSSFALYDGKGGEDFLPYQVSSRFFVRDQDK-RIIAAVRKW 143
K+ + + + D P+ SS+ ++++ I+ +RKW
Sbjct: 153 KRSVTQEINNQDAVSDTTPFSFSSKHATIEKNEISILQNLRKW 195
>sp|Q06183|TEBH_EUPCR Telomere-binding protein homolog OS=Euplotes crassus PE=3 SV=1
Length = 460
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 24 VSFVGVILEVGSPKQSKGTDSFCTIKVTDESHT-KDGIS----VNIFAESMEKLPYIVSV 78
++F V+++ P + C +KV D +H K+G V + + E LP I
Sbjct: 35 INFYAVVIDACFPYKVDEKKYMCYLKVIDTTHNVKEGDDNFAIVALQSRKFEDLPIIQRC 94
Query: 79 GDIILLSHVVMKAHNKQAYALFNKKF-SSFALYDG----------KGGEDFL--PYQVSS 125
GDII + + Q Y N + SS+AL+ G+DF Y S
Sbjct: 95 GDIIRVHRAEYNYKDDQHYFKLNMSYSSSWALFSADEEVAPEVIKDEGDDFTYRSYAYSG 154
Query: 126 RFFVRD-QDKRIIAAVRKWLLNFQFKED 152
+ + D QD++++ R W ++ K D
Sbjct: 155 KQYNFDTQDQKLLKNTRAWNKSYFAKND 182
>sp|Q5R6B1|LRRT1_PONAB Leucine-rich repeat transmembrane neuronal protein 1 OS=Pongo
abelii GN=LRRTM1 PE=2 SV=1
Length = 522
Score = 35.8 bits (81), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 135 RIIAAVRKWLLNFQFKEDSKKFLLLREIKDGQRINMACKVFHIC----EVAKGEWMAFVW 190
R + A+ WL NFQ + D E G+ + A FH+C E G ++ V
Sbjct: 320 RNVCALASWLSNFQGRYDGNLQCASPEYAQGEDVLDAVYAFHLCEDGAEPTSGHLLSAVT 379
Query: 191 DGTD-APPAQISKKLED 206
+ +D PPA + L D
Sbjct: 380 NRSDLGPPASSATTLAD 396
>sp|Q86UE6|LRRT1_HUMAN Leucine-rich repeat transmembrane neuronal protein 1 OS=Homo
sapiens GN=LRRTM1 PE=2 SV=2
Length = 522
Score = 35.8 bits (81), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 135 RIIAAVRKWLLNFQFKEDSKKFLLLREIKDGQRINMACKVFHIC----EVAKGEWMAFVW 190
R + A+ WL NFQ + D E G+ + A FH+C E G ++ V
Sbjct: 320 RNVCALASWLNNFQGRYDGNLQCASPEYAQGEDVLDAVYAFHLCEDGAEPTSGHLLSAVT 379
Query: 191 DGTD-APPAQISKKLED 206
+ +D PPA + L D
Sbjct: 380 NRSDLGPPASSATTLAD 396
>sp|Q55BM5|PRI2_DICDI DNA primase large subunit OS=Dictyostelium discoideum GN=prim2 PE=3
SV=1
Length = 470
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 393 DGEKLFGGYPFVDVLKRKINKLLGVAVSDGQEIK--DAPRNPPWVQC 437
+G+KL G P++ L+R KLL + + D Q I+ +A + P V C
Sbjct: 368 NGDKLVHGCPYIQSLERLEQKLLDLGIDDFQRIQILEATKTSPNVAC 414
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 181,039,707
Number of Sequences: 539616
Number of extensions: 7858680
Number of successful extensions: 14781
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 14746
Number of HSP's gapped (non-prelim): 27
length of query: 464
length of database: 191,569,459
effective HSP length: 121
effective length of query: 343
effective length of database: 126,275,923
effective search space: 43312641589
effective search space used: 43312641589
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)