BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012432
(464 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 121/265 (45%), Gaps = 49/265 (18%)
Query: 170 LPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKV 229
+PV+L FHGG + S +S D CRR+ LC +VV+V YR APEN +P A++DG
Sbjct: 113 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIA 172
Query: 230 LHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPSRCVL 289
L+W+ ++ WL + D +
Sbjct: 173 LNWVNSRS---------------------------------------WLKSKKDSKVHIF 193
Query: 290 L-GVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDK 348
L G S G NIA VA +A +G + V+ +L+ P F G+ T SE L YF
Sbjct: 194 LAGDSSGGNIAHNVALRAGESG-----IDVLGNILLNPMFGGNERTESEKSLDGKYFVTV 248
Query: 349 AMCMLAWKLFLPEEEFSLDHPAANPLIPDRGPPLK--LMPPTLTVVAEHDWMRDRAIAYS 406
WK FLPE E +HPA NP P RG L+ P +L VVA D +RD +AY+
Sbjct: 249 RDRDWYWKAFLPEGE-DREHPACNPFSP-RGKSLEGVSFPKSLVVVAGLDLIRDWQLAYA 306
Query: 407 EELRKVNVDAPVLEYKDAVHEFATL 431
E L+K + ++ + A F L
Sbjct: 307 EGLKKAGQEVKLMHLEKATVGFYLL 331
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 120/265 (45%), Gaps = 49/265 (18%)
Query: 170 LPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKV 229
PV++ FHGG +V S S D CRR +L +VV+V YR APE+R+P A++DG
Sbjct: 112 FPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTA 171
Query: 230 LHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADP-SRCV 288
L W+ Q P++ + D +R
Sbjct: 172 LKWVMSQ---------------------------------------PFMRSGGDAQARVF 192
Query: 289 LLGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDK 348
L G S G NIA +VA +A G VKV +L+ F G+ T SE +L YF
Sbjct: 193 LSGDSSGGNIAHHVAVRAADEG-----VKVCGNILLNAMFGGTERTESERRLDGKYFVTL 247
Query: 349 AMCMLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLMP--PTLTVVAEHDWMRDRAIAYS 406
WK +LPE+ DHPA NP P+ G L +P +L +V+ D DR +AY+
Sbjct: 248 QDRDWYWKAYLPEDA-DRDHPACNPFGPN-GRRLGGLPFAKSLIIVSGLDLTCDRQLAYA 305
Query: 407 EELRKVNVDAPVLEYKDAVHEFATL 431
+ LR+ V++ ++A F L
Sbjct: 306 DALREDGHHVKVVQCENATVGFYLL 330
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 52/268 (19%)
Query: 171 PVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVL 230
PV++ +HGGG+V S +S +D CRRIARL + VV+V YRLAPE++FPAA D
Sbjct: 80 PVLVYYHGGGFVICSIES--HDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDAT 137
Query: 231 HWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPSRCVLL 290
W+ + A DPS+ +
Sbjct: 138 KWVAENAE----------------------------------------ELRIDPSKIFVG 157
Query: 291 GVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANS-YFYDKA 349
G S G N+A V+ A +G D +K Q+L+YP PT S ++ + D+
Sbjct: 158 GDSAGGNLAAAVSIMARDSGE--DFIK--HQILIYPVVNFVAPTPSLLEFGEGLWILDQK 213
Query: 350 MCMLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEEL 409
+++W E+ FS + NPL L+ +PP L + AE+D +RD + + L
Sbjct: 214 --IMSW---FSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLRDEGEVFGQML 268
Query: 410 RKVNVDAPVLEYKDAVHEFATLDMLLKT 437
R+ V+A ++ Y+ +H F +LK
Sbjct: 269 RRAGVEASIVRYRGVLHGFINYYPVLKA 296
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 116/258 (44%), Gaps = 49/258 (18%)
Query: 166 NRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFED 225
N KLP+++ FHGGG++ S S FC +A V++ +V YRLAPE+R PAA++D
Sbjct: 79 NSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDD 138
Query: 226 GMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPS 285
M+ L W ++ S E WL AD S
Sbjct: 139 AMEALQW----------------IKDSRDE---------------------WLTNFADFS 161
Query: 286 RCVLLGVSCGANIADYVA-RQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSY 344
C ++G S G NIA + R A VA LL P+K+ VL P F GS T SE++LAN
Sbjct: 162 NCFIMGESAGGNIAYHAGLRAAAVADELL-PLKIKGLVLDEPGFGGSKRTGSELRLANDS 220
Query: 345 FYDKAMCMLAWKLFLPEEEFSLDHPAANPLIPDRGPPL------KLMPPTLTVVAEH-DW 397
+ L W+L LP DH NP PL + + + VV H D
Sbjct: 221 RLPTFVLDLIWELSLPMGA-DRDHEYCNPTA--ESEPLYSFDKIRSLGWRVMVVGCHGDP 277
Query: 398 MRDRAIAYSEELRKVNVD 415
M DR + +E L K VD
Sbjct: 278 MIDRQMELAERLEKKGVD 295
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 39 TRPEE---SVSAPNPSFTEGVATKDIHIDPFTSLSIRIFLPESAL 80
TRP + + ++P+P+ + V TKD+ ++P + +R+FLP AL
Sbjct: 33 TRPIQIPSTAASPDPTSSSPVLTKDLALNPLHNTFVRLFLPRHAL 77
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 117/267 (43%), Gaps = 58/267 (21%)
Query: 170 LPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKV 229
LP +L +HGGG+V GS ++ +D+ CRR++RL D +VV+V YRLAPE +FP A ED
Sbjct: 73 LPAVLYYHGGGFVFGSIET--HDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAA 130
Query: 230 LHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPSRCVL 289
L W+ +A D G DP R +
Sbjct: 131 LKWVADRA-----------------------------DELG-----------VDPDRIAV 150
Query: 290 LGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFF-IGSVPTHSEIKLANSYFYDK 348
G S G N+A V+ +G L V QVL+YP VPT S ++ +
Sbjct: 151 AGDSAGGNLAAVVSILDRNSGEKL----VKKQVLIYPVVNXTGVPTASLVEFGVAETTSL 206
Query: 349 AMCMLAW----KLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAEHDWMRDRAIA 404
+ + W L PEE + A+PL+ D G +PP L V AE+D +RD
Sbjct: 207 PIELXVWFGRQYLKRPEEAYDFK---ASPLLADLGG----LPPALVVTAEYDPLRDEGEL 259
Query: 405 YSEELRKVNVDAPVLEYKDAVHEFATL 431
Y+ + + A + + VH F +
Sbjct: 260 YAYKXKASGSRAVAVRFAGXVHGFVSF 286
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 124/287 (43%), Gaps = 55/287 (19%)
Query: 148 MNLNGKSDVYRGYAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVV 207
M+L G++ R Y P + P ++ +HGGGWV G D +D CR +A+ +V
Sbjct: 53 MDLPGRTLKVRMYRPEGVEP-PYPALVYYHGGGWVVG--DLETHDPVCRVLAKDGRAVVF 109
Query: 208 AVGYRLAPENRFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVD 267
+V YRLAPE++FPAA ED L W+ ++ A +F
Sbjct: 110 SVDYRLAPEHKFPAAVEDAYDALQWIAER----------------AADF----------- 142
Query: 268 GFGSSVVEPWLAAHADPSRCVLLGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPF 327
H DP+R + G S G N+A A +++A P + Q+L+YP
Sbjct: 143 -------------HLDPARIAVGGDSAGGNLA---AVTSILAKERGGPA-LAFQLLIYP- 184
Query: 328 FIGSVPTHSEIKL---ANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKL 384
G P H + A Y M + +L E L HP +P++ P L
Sbjct: 185 STGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSLE-ELTHPWFSPVL---YPDLSG 240
Query: 385 MPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATL 431
+PP A++D +RD Y+E L K V + ++D +H FA
Sbjct: 241 LPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQF 287
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 58/300 (19%)
Query: 158 RGYAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPEN 217
R Y P D R LP ++ +HGGG+V GS ++ +D+ CRR+A L +VV+V YRLAPE+
Sbjct: 66 RVYRPRDGER--LPAVVYYHGGGFVLGSVET--HDHVCRRLANLSGAVVVSVDYRLAPEH 121
Query: 218 RFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPW 277
+FPAA ED W +A+ +G
Sbjct: 122 KFPAAVEDAYDAAKW------VADNYDKLG------------------------------ 145
Query: 278 LAAHADPSRCVLLGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFF-IGSVPTHS 336
D + + G S G N+A A A G V QVL+YP + PT S
Sbjct: 146 ----VDNGKIAVAGDSAGGNLAAVTAIMARDRGESF----VKYQVLIYPAVNLTGSPTVS 197
Query: 337 EIKLANSYFYDKAMCMLAW--KLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAE 394
++ + + ++AW + + + + +L P A+P+ D L +PP L + AE
Sbjct: 198 RVEYSGPEYVILTADLMAWFGRQYFSKPQDALS-PYASPIFAD----LSNLPPALVITAE 252
Query: 395 HDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDMLLKTPQAQACAEDIAIWVKKF 454
+D +RD Y+ L+ V A + Y +H F +L+ + + IA +K
Sbjct: 253 YDPLRDEGELYAHLLKTRGVRAVAVRYNGVIHGFVNFYPILE--EGREAVSQIAASIKSM 310
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 123/287 (42%), Gaps = 55/287 (19%)
Query: 148 MNLNGKSDVYRGYAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVV 207
M+L G++ R Y P + P ++ +HGG WV G D +D CR +A+ +V
Sbjct: 53 MDLPGRTLKVRMYRPEGVEP-PYPALVYYHGGSWVVG--DLETHDPVCRVLAKDGRAVVF 109
Query: 208 AVGYRLAPENRFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVD 267
+V YRLAPE++FPAA ED L W+ ++ A +F
Sbjct: 110 SVDYRLAPEHKFPAAVEDAYDALQWIAER----------------AADF----------- 142
Query: 268 GFGSSVVEPWLAAHADPSRCVLLGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPF 327
H DP+R + G S G N+A A +++A P + Q+L+YP
Sbjct: 143 -------------HLDPARIAVGGDSAGGNLA---AVTSILAKERGGPA-LAFQLLIYP- 184
Query: 328 FIGSVPTHSEIKL---ANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKL 384
G P H + A Y M + +L E L HP +P++ P L
Sbjct: 185 STGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLE-ELTHPWFSPVL---YPDLSG 240
Query: 385 MPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATL 431
+PP A++D +RD Y+E L K V + ++D +H FA
Sbjct: 241 LPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQF 287
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 55/286 (19%)
Query: 149 NLNGKSDVYRGYAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVA 208
+L G++ R Y P + P ++ +HGGGWV G D +D CR +A+ +V +
Sbjct: 54 DLPGRTLKVRXYRPEGVEP-PYPALVYYHGGGWVVG--DLETHDPVCRVLAKDGRAVVFS 110
Query: 209 VGYRLAPENRFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDG 268
V YRLAPE++FPAA ED L W+ ++ A +F
Sbjct: 111 VDYRLAPEHKFPAAVEDAYDALQWIAER----------------AADF------------ 142
Query: 269 FGSSVVEPWLAAHADPSRCVLLGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFF 328
H DP+R + G S G N+A A +++A P + Q+L+YP
Sbjct: 143 ------------HLDPARIAVGGDSAGGNLA---AVTSILAKERGGPA-LAFQLLIYP-S 185
Query: 329 IGSVPTHSEIKL---ANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLM 385
G P H + A Y + +L E L HP +P++ P L +
Sbjct: 186 TGYDPAHPPASIEENAEGYLLTGGXXLWFRDQYLNSLE-ELTHPWFSPVL---YPDLSGL 241
Query: 386 PPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATL 431
PP A++D +RD Y+E L K V + ++D +H FA
Sbjct: 242 PPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQF 287
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 53/260 (20%)
Query: 172 VMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLH 231
V++ +HGGG+V G +S D CR I C + ++V YRLAPEN+FPAA D L
Sbjct: 92 VLVYYHGGGFVLGDIESY--DPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALK 149
Query: 232 WLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPSRCVLLG 291
W+ + +K +G + G G
Sbjct: 150 WVYNNS-------------------EKFNGKYGIAVG----------------------G 168
Query: 292 VSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMC 351
S G N+A A A+++ + + +K+ QVL+YP + T S +F +
Sbjct: 169 DSAGGNLA---AVTAILSKK--ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHI 223
Query: 352 MLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRK 411
+ +L LD + P++ D L +PP L + AEHD +RD+ AY+ +L +
Sbjct: 224 DWFGQQYLRSFADLLDFRFS-PILAD----LNDLPPALIITAEHDPLRDQGEAYANKLLQ 278
Query: 412 VNVDAPVLEYKDAVHEFATL 431
V +E+ + +H F +
Sbjct: 279 SGVQVTSVEFNNVIHGFVSF 298
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 53/260 (20%)
Query: 172 VMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLH 231
V++ +HGGG+V G +S D CR I C + ++V YRLAPEN+FPAA D L
Sbjct: 92 VLVYYHGGGFVLGDIESY--DPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALK 149
Query: 232 WLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPSRCVLLG 291
W+ + +K +G + G G
Sbjct: 150 WVYNNS-------------------EKFNGKYGIAVG----------------------G 168
Query: 292 VSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMC 351
S G N+A A A+++ + + +K+ QVL+YP + T S +F +
Sbjct: 169 DSAGGNLA---AVTAILSKK--ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHI 223
Query: 352 MLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRK 411
+ +L LD +P++ D L +PP L + AEHD +RD+ AY+ +L +
Sbjct: 224 DWFGQQYLRSFADLLDF-RFSPILAD----LNDLPPALIITAEHDPLRDQGEAYANKLLQ 278
Query: 412 VNVDAPVLEYKDAVHEFATL 431
V +++ + +H F +
Sbjct: 279 SGVQVTSVKFNNVIHGFVSF 298
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 53/260 (20%)
Query: 172 VMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLH 231
V++ +HGGG+V G +S D CR I C + ++V YRLAPEN+FPAA D L
Sbjct: 92 VLVYYHGGGFVLGDIESY--DPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALK 149
Query: 232 WLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPSRCVLLG 291
W+ + +K +G + G G
Sbjct: 150 WVYNNS-------------------EKFNGKYGIAVG----------------------G 168
Query: 292 VSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMC 351
S G N+A A A+++ + + +K+ QVL+YP + T S +F +
Sbjct: 169 DSAGGNLA---AVTAILSKK--ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHI 223
Query: 352 MLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRK 411
+ +L LD +P++ D L +PP L + AEHD +RD+ AY+ +L +
Sbjct: 224 DWFGQQYLRSFADLLDF-RFSPILAD----LNDLPPALIITAEHDPLRDQGEAYANKLLQ 278
Query: 412 VNVDAPVLEYKDAVHEFATL 431
V + + + +H F +
Sbjct: 279 SGVQVTSVRFNNVIHGFVSF 298
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 53/260 (20%)
Query: 172 VMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLH 231
V++ +HGGG+V G +S D CR I C + ++V YRLAPEN+FPAA D L
Sbjct: 92 VLVYYHGGGFVLGDIESY--DPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALK 149
Query: 232 WLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPSRCVLLG 291
W+ + +K +G + G G
Sbjct: 150 WVYNNS-------------------EKFNGKYGIAVG----------------------G 168
Query: 292 VSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMC 351
S G N+A A A+++ + + +K+ QVL+YP + T S +F +
Sbjct: 169 DSAGGNLA---AVTAILSKK--ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHI 223
Query: 352 MLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRK 411
+ +L LD +P++ D L +PP L + AEHD +RD+ AY+ +L +
Sbjct: 224 DWFGQQYLRSFADLLDF-RFSPILAD----LNDLPPALIITAEHDPLRDQGEAYANKLLQ 278
Query: 412 VNVDAPVLEYKDAVHEFATL 431
V + + + +H F +
Sbjct: 279 SGVQVTSVGFNNVIHGFVSF 298
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 103/281 (36%), Gaps = 47/281 (16%)
Query: 147 AMNLNGKSDVYRGYAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIV 206
A L+G +V + D +PV+L HGGG+ G+ +S +D FC +AR V
Sbjct: 56 APGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAES--SDPFCVEVARELGFAV 113
Query: 207 VAVGYRLAPENRFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLV 266
V YRLAPE FP D C ++ + A E
Sbjct: 114 ANVEYRLAPETTFPGPVND----------------CYAALLYIHAHAEELG--------- 148
Query: 267 DGFGSSVVEPWLAAHADPSRCVLLGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYP 326
DPSR + G S G + A V+ R V V Q L P
Sbjct: 149 ---------------IDPSRIAVGGQSAGGGL----AAGTVLKARDEGVVPVAFQFLEIP 189
Query: 327 FFIGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPL-IPDRGPPLKLM 385
+ T S ++ + + +L+WK +L E + P + P R L +
Sbjct: 190 ELDDRLETVSXTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGL 249
Query: 386 PPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVH 426
PPT E D +RD I Y+ L + V + + H
Sbjct: 250 PPTYLSTXELDPLRDEGIEYALRLLQAGVSVELHSFPGTFH 290
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 103/281 (36%), Gaps = 47/281 (16%)
Query: 147 AMNLNGKSDVYRGYAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIV 206
A L+G +V + D +PV+L HGGG+ G+ +S +D FC +AR V
Sbjct: 56 APGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAES--SDPFCVEVARELGFAV 113
Query: 207 VAVGYRLAPENRFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLV 266
V YRLAPE FP D C ++ + A E
Sbjct: 114 ANVEYRLAPETTFPGPVND----------------CYAALLYIHAHAEELG--------- 148
Query: 267 DGFGSSVVEPWLAAHADPSRCVLLGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYP 326
DPSR + G S G + A V+ R V V Q L P
Sbjct: 149 ---------------IDPSRIAVGGQSAGGGL----AAGTVLKARDEGVVPVAFQFLEIP 189
Query: 327 FFIGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPL-IPDRGPPLKLM 385
+ T S ++ + + +L+WK +L E + P + P R L +
Sbjct: 190 ELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGL 249
Query: 386 PPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVH 426
PPT E D +RD I Y+ L + V + + H
Sbjct: 250 PPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFH 290
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 106/261 (40%), Gaps = 53/261 (20%)
Query: 171 PVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVL 230
PV++ H GG+ G+ D+ + C +AR VV+V YRLAPE+ +PAA D ++VL
Sbjct: 86 PVVVYCHAGGFALGNLDT--DHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVL 143
Query: 231 HWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPSRCVLL 290
W V G+AT GF D R +
Sbjct: 144 TW----------------VVGNATRL-----------GF-------------DARRLAVA 163
Query: 291 GVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAM 350
G S GA +A +A A L P V+ Q+L P + PT S + + +D
Sbjct: 164 GSSAGATLAAGLAHGAADGS--LPP--VIFQLLHQP-VLDDRPTASRSEFRATPAFDGEA 218
Query: 351 CMLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELR 410
L W+ +L + S + +P R L +P TL E D RD + Y++ L
Sbjct: 219 ASLMWRHYLAGQTPSPES------VPGRRGQLAGLPATLITCGEIDPFRDEVLDYAQRLL 272
Query: 411 KVNVDAPVLEYKDAVHEFATL 431
V + + A H F +L
Sbjct: 273 GAGVSTELHIFPRACHGFDSL 293
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 173 MLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLHW 232
+L HGGG+V GS ++ + I+R + + YRLAPE+ FPAA EDG+ W
Sbjct: 70 ILYLHGGGYVMGSINT--HRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRW 127
Query: 233 LGKQA 237
L Q
Sbjct: 128 LLDQG 132
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 173 MLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLHW 232
+L HGGG+V GS ++ + I+R + + YRLAPE+ FPAA EDG+ W
Sbjct: 83 ILYLHGGGYVMGSINT--HRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRW 140
Query: 233 LGKQA 237
L Q
Sbjct: 141 LLDQG 145
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 173 MLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLHW 232
+L FHGGG++SGS + + ++A+ + ++ YRLAPEN FPAA +D +
Sbjct: 83 ILYFHGGGYISGSPST--HLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRA 140
Query: 233 LGKQANLAE----CSKSMGNVRGSATEFK-KADG 261
L K A A+ S G +A+ K K DG
Sbjct: 141 LLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDG 174
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 173 MLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLHW 232
+L FHGGG++SGS + + ++A+ + ++ YRLAPEN FPAA +D +
Sbjct: 97 ILYFHGGGYISGSPST--HLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRA 154
Query: 233 LGKQANLAE----CSKSMGNVRGSATEFK-KADG 261
L K A A+ S G +A+ K K DG
Sbjct: 155 LLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDG 188
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 172 VMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENRFPAAFEDGMKVLH 231
+ HGGG++ G+ D+ +D R +AR V+ + Y L+P+ R+P A E+ + V
Sbjct: 89 TLYYLHGGGFILGNLDT--HDRIXRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCS 146
Query: 232 WLGKQAN 238
+ + A+
Sbjct: 147 YFSQHAD 153
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 20/114 (17%)
Query: 160 YAPVDMNRR-KLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENR 218
Y P D+ ++ +LPVM+ HGGG + G+ A+ Y +A +V+VV + YRL
Sbjct: 104 YTPADLTKKNRLPVMVWIHGGGLMVGA----ASTYDGLALAAHENVVVVTIQYRLGIWGF 159
Query: 219 FPAAFE---------DGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNR 263
F E D + L W+ Q N+A S G GS T F ++ G
Sbjct: 160 FSTGDEHSRGNWGHLDQVAALRWV--QDNIA----SFGGNPGSVTIFGESAGGE 207
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 160 YAPVDMNRR-KLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENR 218
Y P D+ ++ +LPVM+ HGGG + G+ A+ Y +A +V+VV + YRL
Sbjct: 104 YTPADLTKKNRLPVMVWIHGGGLMVGA----ASTYDGLALAAHENVVVVTIQYRLGIWGF 159
Query: 219 FPAAFE---------DGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHL 265
F E D + L W+ Q N+A S G GS T F ++ G +
Sbjct: 160 FSTGDEHSRGNWGHLDQVAALRWV--QDNIA----SFGGNPGSVTIFGESAGGESV 209
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 160 YAPVDMNRR-KLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENR 218
Y P D+ ++ +LPVM+ HGGG + G+ A+ Y +A +V+VV + YRL
Sbjct: 102 YTPADLTKKNRLPVMVWIHGGGLMVGA----ASTYDGLALAAHENVVVVTIQYRLGIWGF 157
Query: 219 FPAAFE---------DGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHL 265
F E D + L W+ Q N+A S G GS T F ++ G +
Sbjct: 158 FSTGDEHSRGNWGHLDQVAALRWV--QDNIA----SFGGNPGSVTIFGESAGGESV 207
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 160 YAPVDMNRR-KLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENR 218
Y P D+ ++ +LPVM+ HGGG + G+ A+ Y +A +V+VV + YRL
Sbjct: 99 YTPADLTKKNRLPVMVWIHGGGLMVGA----ASTYDGLALAAHENVVVVTIQYRLGIWGF 154
Query: 219 FPAAFE---------DGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHL 265
F E D + L W+ Q N+A S G GS T F ++ G +
Sbjct: 155 FSTGDEHSRGNWGHLDQVAALRWV--QDNIA----SFGGNPGSVTIFGESAGGESV 204
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 160 YAPVDMNRR-KLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAPENR 218
Y P D+ +R +LPVM+ HGGG + G A+ Y ++ +V+VV + YRL
Sbjct: 100 YTPADLTKRGRLPVMVWIHGGGLMVGG----ASTYDGLALSAHENVVVVTIQYRLGIWGF 155
Query: 219 FPAAFE---------DGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHL 265
F E D + L W+ Q N+A + G GS T F ++ G + +
Sbjct: 156 FSTGDEHSRGNWGHLDQVAALRWV--QDNIA----NFGGDPGSVTIFGESAGGQSV 205
>pdb|1JKM|B Chain B, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
pdb|1JKM|A Chain A, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
Length = 361
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 95/258 (36%), Gaps = 60/258 (23%)
Query: 170 LPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLA----PENRFPAAFED 225
LP ++ HGGG + D+ + +C +A V+V+ V +R A + FP+ ED
Sbjct: 109 LPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVM-VDFRNAWTAEGHHPFPSGVED 167
Query: 226 GMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHLVDGFGSSVVEPWLAAHADPS 285
+ + W+ E +S+G S
Sbjct: 168 CLAAVLWV------DEHRESLG------------------------------------LS 185
Query: 286 RCVLLGVSCGANIADYVARQAVVAGRLLDPVKVVAQVLMYPFFIGSVPTHSEIKLA---- 341
V+ G S G N+A A GRL V A + P+ G E +L
Sbjct: 186 GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASI---PYISGGYAWDHERRLTELPS 242
Query: 342 ----NSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLIPDRGPPLKLMPPTLTVVAEHDW 397
+ YF + L + + P E + D P A P L+ +PP + V E D
Sbjct: 243 LVENDGYFIENGGMALLVRAYDPTGEHAED-PIAWPYFASE-DELRGLPPFVVAVNELDP 300
Query: 398 MRDRAIAYSEELRKVNVD 415
+RD IA++ L + VD
Sbjct: 301 LRDEGIAFARRLARAGVD 318
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 160 YAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAP---- 215
+AP D + LPVM+ HGG + G+ D ++A +VIVV + YRL P
Sbjct: 88 FAP-DTPSQNLPVMVWIHGGAFYLGAGSEPLYD--GSKLAAQGEVIVVTLNYRLGPFGFM 144
Query: 216 -ENRFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHL 265
+ F A+ D + +L + E + G + T F ++ G +
Sbjct: 145 HLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSI 195
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 160 YAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAP---- 215
+AP D + LPVM+ HGG + G+ D ++A +VIVV + YRL P
Sbjct: 88 FAP-DTPSQNLPVMVWIHGGAFYLGAGSEPLYD--GSKLAAQGEVIVVTLNYRLGPFGFL 144
Query: 216 -ENRFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHL 265
+ F A+ D + +L + E + G + T F ++ G +
Sbjct: 145 HLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSI 195
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 160 YAPVDMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLAP---- 215
+AP D + LPVM+ HGG + G+ D ++A +VIVV + YRL P
Sbjct: 88 FAP-DTPSQNLPVMVWIHGGAFYLGAGSEPLYD--GSKLAAQGEVIVVTLNYRLGPFGFM 144
Query: 216 -ENRFPAAFEDGMKVLHWLGKQANLAECSKSMGNVRGSATEFKKADGNRHL 265
+ F A+ D + +L + E + G + T F ++ G +
Sbjct: 145 HLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSI 195
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 23/91 (25%)
Query: 164 DMNR-RKLPVMLQFHGGGWVSGSKDSVAN--DYFCRRIARLCDVIVVAVGYRL------- 213
D NR LPV++ HGGG+ GS DS + +Y + DVIV+ YRL
Sbjct: 108 DKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSK-----DVIVITFNYRLNVYGFLS 162
Query: 214 -----APENRFPAAFEDGMKVLHWLGKQANL 239
P N A D + +L W+ + A+
Sbjct: 163 LNSTSVPGN---AGLRDMVTLLKWVQRNAHF 190
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 12/77 (15%)
Query: 169 KLPVMLQFHGGGWVSGSKDSV-ANDYFCRRIARLCDVIVVAVGYRLAP-----------E 216
KLPVM+ +GG +V GS + N Y I V+ V++ YR P E
Sbjct: 121 KLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITAE 180
Query: 217 NRFPAAFEDGMKVLHWL 233
A D K L W+
Sbjct: 181 GNTNAGLHDQRKGLEWV 197
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 168 RKLPVMLQFHGGGWVSGSKD--SVANDYF--CRRIARLCDVIVVAVGYRLAP 215
R LPVM+ +GG ++ GS + N+Y IA +VIVV YR+ P
Sbjct: 96 RDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEEIATRGNVIVVTFNYRVGP 147
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 168 RKLPVMLQFHGGGWVSGSKD--SVANDYF--CRRIARLCDVIVVAVGYRLAP 215
R LPVM+ +GG ++ GS + N+Y IA +VIVV YR+ P
Sbjct: 96 RDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEEIATRGNVIVVTFNYRVGP 147
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 164 DMNRRKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLA 214
D N +K PVM+ HGG ++ G+ + + +A +VIV+ + YRL
Sbjct: 130 DQNSKK-PVMVYIHGGSYMEGTGNMIDGSI----LASYGNVIVITINYRLG 175
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 171 PVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLA 214
PVM+ HGG ++ G+ N Y +A +VIV+ V YRL
Sbjct: 145 PVMVYIHGGSYMEGT----GNLYDGSVLASYGNVIVITVNYRLG 184
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 171 PVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLA 214
PVM+ HGG ++ G+ N Y +A +VIV+ V YRL
Sbjct: 132 PVMVYIHGGSYMEGT----GNLYDGSVLASYGNVIVITVNYRLG 171
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 171 PVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLA 214
PVM+ HGG ++ G+ N Y +A +VIV+ V YRL
Sbjct: 150 PVMVYIHGGSYMEGT----GNLYDGSVLASYGNVIVITVNYRLG 189
>pdb|2R6A|A Chain A, Crystal Form Bh1
pdb|2R6A|B Chain B, Crystal Form Bh1
pdb|2R6E|A Chain A, Crystal Form B2
pdb|2R6E|B Chain B, Crystal Form B2
pdb|2R6C|A Chain A, Crystal Form Bh2
pdb|2R6C|B Chain B, Crystal Form Bh2
pdb|2R6C|C Chain C, Crystal Form Bh2
pdb|2R6C|D Chain D, Crystal Form Bh2
pdb|2R6C|E Chain E, Crystal Form Bh2
pdb|2R6C|F Chain F, Crystal Form Bh2
pdb|2R6D|A Chain A, Crystal Form B1
pdb|2R6D|B Chain B, Crystal Form B1
pdb|2R6D|C Chain C, Crystal Form B1
pdb|2R6D|D Chain D, Crystal Form B1
pdb|2R6D|E Chain E, Crystal Form B1
pdb|2R6D|F Chain F, Crystal Form B1
pdb|4ESV|A Chain A, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|B Chain B, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|C Chain C, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|D Chain D, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|E Chain E, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|F Chain F, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|G Chain G, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|H Chain H, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|I Chain I, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|J Chain J, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|K Chain K, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
pdb|4ESV|L Chain L, A New Twist On The Translocation Mechanism Of Helicases
From The Structure Of Dnab With Its Substrates
Length = 454
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 9/130 (6%)
Query: 324 MYPFFIGSVPTHS---EIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPA---ANPLIPD 377
M F +P S E + + F D A + A ++ +PE+ + H A + D
Sbjct: 1 MSELFSERIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVAD 60
Query: 378 RGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRK-VNVDAPVLEYKDAVHEFATLDMLLK 436
RG P+ L+ T + A ++Y EL V A V Y V E + L L++
Sbjct: 61 RGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIR 120
Query: 437 TPQAQACAED 446
T A + A+D
Sbjct: 121 T--ATSIAQD 128
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 169 KLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRLA 214
K PVML HGG ++ G+ N + +A +VIVV + YRL
Sbjct: 137 KKPVMLFLHGGSYMEGT----GNMFDGSVLAAYGNVIVVTLNYRLG 178
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 168 RKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRL 213
+K PV+ HGG ++ GS S D A+ DV+VV + YR+
Sbjct: 97 KKRPVLFWIHGGAFLFGSGSSPWYD--GTAFAKHGDVVVVTINYRM 140
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 168 RKLPVMLQFHGGGWVSGSKDSVANDYFCRRIARLCDVIVVAVGYRL 213
+K PV+ HGG ++ GS S D A+ DV+VV + YR+
Sbjct: 97 KKRPVLFWIHGGAFLFGSGSSPWYD--GTAFAKHGDVVVVTINYRM 140
>pdb|2VYE|A Chain A, Crystal Structure Of The Dnac-Ssdna Complex
pdb|2VYE|B Chain B, Crystal Structure Of The Dnac-Ssdna Complex
pdb|2VYF|A Chain A, Crystal Structure Of The Dnac
pdb|2VYF|B Chain B, Crystal Structure Of The Dnac
Length = 454
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Query: 324 MYPFFIGSVPTHS---EIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPA---ANPLIPD 377
M F +P S E + + F D LA + +PE+ + H A + D
Sbjct: 1 MSELFSERIPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVAD 60
Query: 378 RGPPLKLMPPTLTVVAEHDWMRDRAIAYSEEL-RKVNVDAPVLEYKDAVHEFATLDMLLK 436
+G P+ L+ T + A ++Y EL V A V Y V E + L L++
Sbjct: 61 KGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIR 120
Query: 437 TPQAQACAED 446
T A + A+D
Sbjct: 121 T--ATSIAQD 128
>pdb|1RP1|A Chain A, Dog Pancreatic Lipase Related Protein 1
Length = 450
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 250 RGSATEFKKADGNRHLVDGFGSSVVEPWLAAHA-DPSRCVLLGVSCGANIADYVARQAVV 308
+GS T + +A N +V + ++ A ++ PS+ L+G S GA++A +
Sbjct: 110 KGSQTSYTQAANNVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG 169
Query: 309 AGRL--LDPVKVVAQ 321
GR+ LDPV+ Q
Sbjct: 170 LGRITGLDPVEASFQ 184
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,212,913
Number of Sequences: 62578
Number of extensions: 583924
Number of successful extensions: 1186
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1117
Number of HSP's gapped (non-prelim): 65
length of query: 464
length of database: 14,973,337
effective HSP length: 102
effective length of query: 362
effective length of database: 8,590,381
effective search space: 3109717922
effective search space used: 3109717922
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)