BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012434
(464 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7FGZ2|RH1_ARATH DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana
GN=RH1 PE=2 SV=3
Length = 522
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/442 (75%), Positives = 385/442 (87%)
Query: 2 EEAKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE 61
+E K + V+PWMR+PVDVS E+C LD LPCL+P+LK AL+NMGISSLFPVQVAVW E
Sbjct: 5 KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
TIGPG FERD+C+NSPTGSGKTLSYALPIVQ L++R VRCLRALVVLPTRDLALQVKDVF
Sbjct: 65 TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVF 124
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPG 181
AIAPAVGLSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D+ Q L+SAVDILVATPG
Sbjct: 125 DAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPG 184
Query: 182 RLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLP 241
RLMDHIN T+GFTLEHL YLVVDETDRLLREAYQ+WLPTVLQLT++ +++ F + F+P
Sbjct: 185 RLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVP 244
Query: 242 SAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY 301
SAFGSL+T+RR VERGFK KPYPRLVKMVLSATLTQDP+KL QLDLHHPLF+TTG +RY
Sbjct: 245 SAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRY 304
Query: 302 KLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIK 361
+LPE+LE +LICE+ +KP+YLVALL+S EKCI+FTSSVE+T RLC LLN FG+ +IK
Sbjct: 305 RLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIK 364
Query: 362 IKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIH 421
KEYSG QS+RSK LKAFR+G IQVLV+SDA+TRGMDV+GV NV+NYD P + KT+IH
Sbjct: 365 AKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIH 424
Query: 422 RAGRTARAGQLGRCFTLLHKDE 443
RAGRTARAGQ GRCFTLL E
Sbjct: 425 RAGRTARAGQAGRCFTLLSNHE 446
>sp|Q0DWT8|RH1_ORYSJ DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp.
japonica GN=Os02g0795900 PE=2 SV=1
Length = 521
Score = 595 bits (1533), Expect = e-169, Method: Compositional matrix adjust.
Identities = 292/439 (66%), Positives = 344/439 (78%), Gaps = 3/439 (0%)
Query: 9 MPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLF 68
+P LPWMR+PVD+ F CP+ HLP LDPRL LQ MGI S FPVQVA W ETIGPG F
Sbjct: 18 VPHLPWMRNPVDIDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAF 77
Query: 69 ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAV 128
ERD+CINSPTGSGKTL+YALPIVQ L+ R VRCLRALVVLPTRDLALQVK+VF AIAP V
Sbjct: 78 ERDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVV 137
Query: 129 GLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHIN 188
GLSVG AVGQSSIADE+S LI++ K D E + E Q+ VDILVATPGRLMDHI+
Sbjct: 138 GLSVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHIS 197
Query: 189 ATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR-FSDASTFLPSAFGSL 247
T+GF+LEHL YLVVDETDR+LREAYQ+WLPTV+QLTRS ++N +SD + + L
Sbjct: 198 MTKGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNG--ETLLHPL 255
Query: 248 KTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERL 307
TIRR GVERGFK K +PRL K+VLSATLTQDP+KL+QL+L HPL L +G+ RY++P +L
Sbjct: 256 TTIRRSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKL 315
Query: 308 ESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSG 367
+SYKL+C+S LKPL L+ LLQ L EKC+VFTSSVES+HRL TLL F +L K EYS
Sbjct: 316 QSYKLVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSR 375
Query: 368 LQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTA 427
LQR+S R KTL AF+EGKI VL+ +D M RG+ ++G+ V+NYD P Y+KTYIHRAGRTA
Sbjct: 376 LQRESTRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTA 435
Query: 428 RAGQLGRCFTLLHKDEKKG 446
RAG+ G CFT L K E K
Sbjct: 436 RAGESGSCFTFLRKHEVKA 454
>sp|Q6DRI7|DDX51_DANRE ATP-dependent RNA helicase DDX51 OS=Danio rerio GN=ddx51 PE=2 SV=1
Length = 652
Score = 293 bits (750), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 183/461 (39%), Positives = 253/461 (54%), Gaps = 53/461 (11%)
Query: 11 VLP-WMRSPVDVSLFEDC-----PLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ---E 61
VLP W+ P DV + +D P+ +P + P L LQ GI S FPVQ V E
Sbjct: 168 VLPQWLSQP-DV-IQKDIKSNLIPISEVPGICPTLLRKLQTNGIQSFFPVQAEVIPAILE 225
Query: 62 TIGPGLF-------ERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLA 114
++G GL RD+C+++PTGSGKTL++ +P+VQ LS R VR +RAL VLPT++LA
Sbjct: 226 SVGSGLLVGPGGYRPRDVCVSAPTGSGKTLAFVIPVVQALSKRVVRQVRALAVLPTKELA 285
Query: 115 LQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVD 174
QV +VF+A L V + GQ S A E + L ++ G+ + S D
Sbjct: 286 QQVSNVFSAYTEGSSLKVVMITGQKSFAAEQTAL---SEIRGGVSH----------SMAD 332
Query: 175 ILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFS 234
I+VATPGRL+DHIN F+L+HL +L++DE DR++ +Q+WL V + S +
Sbjct: 333 IVVATPGRLVDHINKNSSFSLQHLRFLIIDEADRMIDSMHQSWLSQVTKAVYSTPGE--T 390
Query: 235 DASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LF 293
S F + G + P L K++ SATLTQ+P KL LDLH P LF
Sbjct: 391 HTSVFRRTVPGPITAASLS--------PPQIPLQKLLFSATLTQNPEKLQLLDLHQPRLF 442
Query: 294 LTT---------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
+T + + P+ L Y + C KPL ++ L L + FT+S E
Sbjct: 443 SSTHSLTDNPAQSQDTFHFPQGLSEYYVPCTFSKKPLIILHFLLRLKFSPALCFTNSREG 502
Query: 345 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 404
HRL L+ FG +++ E+S R KTLK F +GKI +L+S+DA RG+D+ GV
Sbjct: 503 AHRLYLLVKLFGG--VEVAEFSSKLSPGERQKTLKDFEKGKIPLLISTDAAARGIDINGV 560
Query: 405 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKK 445
V+NYD P YI+TYIHR GRTARAG+ G FT L K ++K
Sbjct: 561 KCVINYDAPQYIRTYIHRVGRTARAGKAGLAFTFLLKVQEK 601
>sp|Q8N8A6|DDX51_HUMAN ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3
Length = 666
Score = 291 bits (746), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 181/467 (38%), Positives = 257/467 (55%), Gaps = 52/467 (11%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V ++ ED P++ +P + P L+ L+ GISS FPVQ AV
Sbjct: 173 KVQPFLPRWLAEPNCVRRNVTEDLVPIEDIPDVHPDLQKQLRAHGISSYFPVQAAVIPAL 232
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
+G G + DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 233 LESAACGFLVGRGGYRPSDLCVSAPTGSGKTLAFVIPVVQALLSRVVCHIRALVVLPTKE 292
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF A L V L GQ S+A E L+++ +
Sbjct: 293 LAQQVSKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQK-------------TADGYRCL 339
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 340 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAA------- 392
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
F P A L+ + V P L K++ SATLTQ+P KL QL LH P
Sbjct: 393 FQSEDPADPCAL--LQRRQAQAVTAASTCCPQMPLQKLLFSATLTQNPEKLQQLGLHQPR 450
Query: 293 FLTTG--------------ETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVF 338
+TG +Y P L + + C KPL ++ L+ +G + + F
Sbjct: 451 LFSTGLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSSKPLVVLHLVLEMGFSRVLCF 510
Query: 339 TSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRG 398
T+S E++HRL L+ FG + + E+S R LK F +GKIQ+L+S+DA RG
Sbjct: 511 TNSRENSHRLFLLVQAFGG--VDVAEFSSRYGPGQRRMILKQFEQGKIQLLISTDATARG 568
Query: 399 MDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKK 445
+DV+GV VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K +++
Sbjct: 569 IDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQER 615
>sp|Q6P9R1|DDX51_MOUSE ATP-dependent RNA helicase DDX51 OS=Mus musculus GN=Ddx51 PE=2 SV=1
Length = 639
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 257/471 (54%), Gaps = 59/471 (12%)
Query: 7 KSMPVLP-WMRSP--VDVSLFED-CPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQET 62
K P LP W+ P V S+ ED P++ +P + P L+ L+ GI+S FPVQ AV
Sbjct: 145 KVQPFLPAWLAKPSCVKKSVTEDLTPIEDIPEVHPDLQKQLRANGITSYFPVQAAVIPAL 204
Query: 63 ---------IGPGLFE-RDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
IG G ++ DLC+++PTGSGKTL++ +P+VQ L +R V +RALVVLPT++
Sbjct: 205 LESADHGFLIGRGGYQPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKE 264
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA QV VF L V L GQ S+A E L+++ +
Sbjct: 265 LAQQVSKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQK-------------TADGFRCL 311
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
DI+VATPGRL+DHI+ T GF+L+ L +L++DE DR++ +Q+WLP V+
Sbjct: 312 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVA--------- 362
Query: 233 FSDASTFLPSAFGSLKTIRRC---GVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
A+ + GS ++R + P L K++ SATLTQDP KL +L L+
Sbjct: 363 ---AAFYSEGPTGSCALLQRTQPQALTAASTCVPQMPLQKLLFSATLTQDPEKLQRLGLY 419
Query: 290 HPLFLTT---------------GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
P +T +Y P L + + C KPL ++ L+ + +
Sbjct: 420 QPRLFSTRLGQQSPKDTAEVDENSGKYTFPVGLTHHYVPCRLSSKPLIVLHLVLRMSCSR 479
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 394
+ FT+S E++HRL L FG + + E+S R K LK F +GKIQ+L+S+DA
Sbjct: 480 ALCFTNSRENSHRLYLLAQAFGG--VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDA 537
Query: 395 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKK 445
RG+DV+GV V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K +++
Sbjct: 538 TARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQER 588
>sp|Q54BD6|DDX51_DICDI Probable ATP-dependent RNA helicase ddx51 OS=Dictyostelium
discoideum GN=ddx51 PE=3 SV=1
Length = 563
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 243/432 (56%), Gaps = 40/432 (9%)
Query: 43 LQNMGISSLFPVQ---VAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAV 99
L+ I +LFPVQ V T G D+C+ +PTGSGKTL+YA+P+VQ + R V
Sbjct: 30 LKEQSIINLFPVQQEIVPFINRTEG-----HDICVCAPTGSGKTLAYAIPLVQKIVKRVV 84
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
R +R V++PT DL +QV+ F +I L V L++G E LIK
Sbjct: 85 RRVRVAVIVPTHDLVIQVEKTFQSIIKGTDLVV-LSLGVKPFHIEQKLLIKNHSYGEHAL 143
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
Y +S VDI+V+TPGR++DHIN T GFTL++L YLV+DE DRLLR+++Q WL
Sbjct: 144 Y---------ESLVDIIVSTPGRIVDHINETLGFTLKYLNYLVIDEADRLLRQSFQDWLE 194
Query: 220 TVLQLTRSDNE-NRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYP------RLVKMVL 272
V+ T ++ N+ + ++ G ++ + + ++ +LVK++L
Sbjct: 195 IVIDSTNQHSDLNQQQEEQLIKYNSKGDIELFEKSISLKDNNNQMNHLCWSEFKLVKLLL 254
Query: 273 SATLTQDPNKLAQLDLHHPLFLTTGETR---YKLPERLESYKLICESKLKPLYLVALL-Q 328
SAT+T +P+K++ L L+ PLF TT +T+ Y +P L+ +I KPL L+ ++ +
Sbjct: 255 SATMTYNPSKISLLQLNAPLFFTTSKTKEIKYSMPSTLKECYIISNGDQKPLVLLNIIYE 314
Query: 329 SL--------GEEKCIVFTSSVESTHRLCTLLNHFGE---LRIKIKEYSGLQRQSVRSKT 377
SL ++K I FT SV+ THRL TLL G+ L+ +EYS R+
Sbjct: 315 SLLKNNANGENKKKIICFTKSVDITHRLNTLLKLIGQVDKLKFTCEEYSSSLSTVERADL 374
Query: 378 LKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFT 437
L F+ +I +L+ SD M+RGMD++ ++ V+NY+ P I Y+HR GRTARAG G +T
Sbjct: 375 LSRFKLNQIDILICSDIMSRGMDIQDIDVVINYNTPPNITLYVHRVGRTARAGNFGVSYT 434
Query: 438 LLHKDEKKGAIG 449
++ K E K I
Sbjct: 435 IVDKSEIKYYIS 446
>sp|P26802|DDX51_DROME Probable ATP-dependent RNA helicase Dbp73D OS=Drosophila
melanogaster GN=Dbp73D PE=2 SV=3
Length = 687
Score = 239 bits (610), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 170/476 (35%), Positives = 239/476 (50%), Gaps = 68/476 (14%)
Query: 5 KKKSMPVLP-WMRSPV-----DVSLFEDCP----LDHLPCLDPRLKVALQNMGISSLFPV 54
KKK LP W+ P + E+ P +D L L+ AL+ M I LFPV
Sbjct: 104 KKKVQMQLPNWLAHPTIIEGGSLQPEEEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPV 163
Query: 55 QVAV--W---QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLP 109
Q V W P RD+C+++PTGSGKTL++A+PIVQ LS R +RALVVLP
Sbjct: 164 QKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLLSQRVDCKVRALVVLP 223
Query: 110 TRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQEL 169
+LALQV V + + L V L Q + DE +L+++ K G Y
Sbjct: 224 VAELALQVYRVISELCSKTELEVCLLSKQHKLEDEQEKLVEQYK---GKYY--------- 271
Query: 170 QSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDN 229
S DI+V TPGRL+DH++AT+GF L+ L +LV+DE DR++ +Q WL + +
Sbjct: 272 -SKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETT 330
Query: 230 ENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
+ A T P + L+ F +P+ K++ SATL+QDP KL L L
Sbjct: 331 DQLL--AGTQAPLCYAELQA--------SFGKQPH----KLLFSATLSQDPEKLQDLRLF 376
Query: 290 HPLFLTTGET-------------------------RYKLPERLESYKLICESKLKPLYLV 324
P T T RY P L + E +LKPL +
Sbjct: 377 QPRLFATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVF 436
Query: 325 ALLQSLGEEKCIVFTSSVESTHRLCTLLN-HFGELRIKIKEYSGLQRQSVRSKTLKAFRE 383
AL++ ++ + FT+S + RL +L F + K+ E SG VR++ L+ F
Sbjct: 437 ALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAA 496
Query: 384 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 439
GKI L+ SDA+ RG+DV V+ V++Y+ P +I TYIHR GRTARAG+ G T+L
Sbjct: 497 GKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVL 552
>sp|Q76PD3|DBP6_SCHPO ATP-dependent RNA helicase dbp6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp6 PE=2 SV=1
Length = 604
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 160/472 (33%), Positives = 230/472 (48%), Gaps = 64/472 (13%)
Query: 6 KKSMPVLP-WMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIG 64
K VLP W+ P+ V L + +L LQ I+ F VQ AV +
Sbjct: 104 KNITSVLPKWLAEPITVDPNTTVEFSSL-NISSKLVERLQKQNITRGFAVQAAVLPLLLQ 162
Query: 65 PGL------FERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVK 118
G + D+C+++ TGSGKTLSY +PIVQ LS+R V LR +V++PTR+L +QV
Sbjct: 163 DGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRELTVQVA 222
Query: 119 DVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVA 178
F GL V GQ S+ E +L E + +D+LV+
Sbjct: 223 KTFEYYMSGAGLQVCAWTGQKSLRHETYQLNG----------------DENECRIDVLVS 266
Query: 179 TPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRS----DNENRFS 234
TPGRL+DHI F+L+HL Y+V+DE DRLL +++Q W+ TV+ N++
Sbjct: 267 TPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNIL 326
Query: 235 D-----ASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLH 289
D + TFLP +L R P P L K+V SATLT+DP+K+A L LH
Sbjct: 327 DLDQNISPTFLPD-IDTLLPYRL----------PSP-LQKLVFSATLTRDPSKIASLKLH 374
Query: 290 HPLFLTT----------GETR-----YKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
+P + GE + +P L+ Y + S+ KP+ L L+ S
Sbjct: 375 NPRLVLVQNKDMEVDDGGEIEDDAIVFSVPPTLQEYHVSVSSE-KPILLYHLIHSKNLTN 433
Query: 335 CIVFTSSVEST---HRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVS 391
+ F S E+ HRL L++ ++ + R K + F G + +LV
Sbjct: 434 ILCFVKSNEAAARLHRLLELIHESLNQSFSCGLFTSSLSRDERKKIISRFATGDLNLLVC 493
Query: 392 SDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 443
SD M RG+DV NV+NYD P +++Y+HR GRTARAG+ G +TL+ E
Sbjct: 494 SDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLVQSHE 545
>sp|A2QA23|DBP6_ASPNC ATP-dependent RNA helicase dbp6 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp6 PE=3 SV=1
Length = 593
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 175/460 (38%), Positives = 239/460 (51%), Gaps = 53/460 (11%)
Query: 8 SMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPG 66
S+P PW+ +P+ S E L +D L L++ G F VQ V + GP
Sbjct: 104 SLP--PWLANPLRASAQERRKFADL-GIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPT 160
Query: 67 LFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAP 126
DLCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q ++ A
Sbjct: 161 NHPGDLCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREACELCAA 220
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 186
GL V AVG +I DE E + G + E VDIL+ TPGRL+DH
Sbjct: 221 GSGLRVASAVGNVAIKDEQRESL------PGYVHRSE-------PNVDILICTPGRLVDH 267
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG- 245
+ T+GFTL++L +LV+DE DRLL E++Q W+ V+ S + P AFG
Sbjct: 268 LRYTKGFTLKNLEWLVIDEADRLLNESFQEWVDVVMT----------SLDARKAPDAFGF 317
Query: 246 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTG-------- 297
S + G+ K+ PR K+VLSAT+T+D KL L L +P + G
Sbjct: 318 SGNFLSGLGLPIQSKE---PR--KVVLSATMTRDVTKLNSLRLANPKLVVIGSDAAATED 372
Query: 298 --------ETRYKLPERLESYKL-ICESKLKPLYLVALLQS--LGEEKCIVFTSSVESTH 346
+ ++ LP LE + + + + KPLYL+ LL S E K +VFT S ES
Sbjct: 373 ESGGVAPSDEQFTLPPTLEEHTVSVGDGSQKPLYLLRLLLSHIKLETKILVFTKSSESAS 432
Query: 347 RLCTLLNHFG-ELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 405
RL LL L +I + S KTL A+R GKI V++++D +RG+D+ +
Sbjct: 433 RLARLLALLEPSLSDRIGTIIKSNKSSASRKTLTAYRRGKISVIIATDRASRGLDLRSLT 492
Query: 406 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKK 445
+VVNYD PA I TY+HR GRTARAGQ G +TL+ E K
Sbjct: 493 HVVNYDVPASITTYVHRVGRTARAGQKGSAWTLVAHREGK 532
>sp|A5E726|DBP6_LODEL ATP-dependent RNA helicase DBP6 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP6 PE=3 SV=1
Length = 663
Score = 214 bits (544), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 229/454 (50%), Gaps = 77/454 (16%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQE--------TI 63
L W+ +P +++ + P P L P + L+++G + F VQV V + +
Sbjct: 207 LDWLTTPEYIAIADTKPFSEFP-LSPFMHENLESLGFENAFAVQVGVLSKLLPEIQANKL 265
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P F D+ +N+ TGSGKTL+Y++PI+++L +R V +RA+V++PT+ L QV+
Sbjct: 266 RPDAFG-DVLVNASTGSGKTLAYSIPIIESLKDRVVPRVRAIVLVPTKPLINQVRATMLQ 324
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
+A L++ SI +E LI + D++++TPGRL
Sbjct: 325 LALGTNLNIVSLKNDISIREESERLI--------------------ELVPDVVISTPGRL 364
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++H+ A +L L YLVVDE DRLL +++Q W ++ ++ + +
Sbjct: 365 VEHL-AMDSISLSSLRYLVVDEADRLLNQSFQNWSQILI--------SKIHLQQVYDVAN 415
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
SLK + K + SATLT D KLA LD H+P L +++
Sbjct: 416 VWSLK------------------VQKFIFSATLTTDAGKLASLDFHNPRLLIVNDSQRLV 457
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEK---CIVFTSSVESTHRLCTL 351
+ +P L YKL + +S LKPL L L + +EK +VFT S ES+ RLCTL
Sbjct: 458 NELFSVPAMLSEYKLNFGVAKSSLKPLILAKFL--IAQEKLSDVLVFTKSNESSIRLCTL 515
Query: 352 LNH-FGELRIKIKEYSGL-----QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 405
L F + ++ K G R S+RSK LK F KI +LV++D + RG+DV +
Sbjct: 516 LQAIFDRICLQEKVKVGFMNLTNNRTSLRSKILKDFTSQKINILVATDLIARGLDVTSIK 575
Query: 406 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 439
+VVNYD + Y+HR GRTARA Q G + L+
Sbjct: 576 DVVNYDLLNSSREYVHRVGRTARANQAGNAYNLV 609
>sp|A3LSJ2|DBP6_PICST ATP-dependent RNA helicase DBP6 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP6 PE=3 SV=2
Length = 591
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 220/449 (48%), Gaps = 73/449 (16%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW--------QETI 63
L W+ +P+ S + P + P L L+ ++ F VQ+A+ + +
Sbjct: 138 LDWLATPIYASPEDSKPFSEFE-ISPFLLKNLERDNFTTAFSVQIAIMDILLHDIKRNRL 196
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + + D+ +N+ TGSGKTL+Y++PI++ L NR V +RA+V++PT+ L QVK F
Sbjct: 197 EPDV-KGDILVNAATGSGKTLAYSIPIIEALHNRVVPRVRAIVLVPTKPLINQVKATFVQ 255
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LSV SI +E +++ P DI+V+TPGRL
Sbjct: 256 LSRGTNLSVVSLRNDVSIKEEGIKIVNSPP--------------------DIIVSTPGRL 295
Query: 184 MDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSA 243
++HI + + L L +LV+DE DRLL +++Q W ++ D
Sbjct: 296 VEHI-SNKSINLNSLQFLVIDEADRLLNQSFQNWCQVLISSLEGD--------------- 339
Query: 244 FGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR--- 300
+ +K P K++ SATLT D KL+ L P + + +
Sbjct: 340 ---------VNIAEEWKITPQ----KLIFSATLTTDSGKLSALKFQKPRLVIVNDRKQLV 386
Query: 301 ---YKLPERLESYKL---ICESKLKPLYLVA-LLQSLGEEKCIVFTSSVESTHRLCTLLN 353
+ +P L Y + ++ +KPL L LL++ ++FT S E++ RLC LL
Sbjct: 387 NEIFNVPSSLSEYTIQFGTAKASIKPLILAKYLLENNKLSNVLIFTKSNEASIRLCKLLE 446
Query: 354 -HFGELR--IKIKEYSGLQRQS-VRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 409
FG+L + I + +S +R+K LK F KI +LV++D + RG+D+ + +V+N
Sbjct: 447 LMFGKLHPSMNIAYINSTNNKSAIRTKILKDFSTQKINILVATDLIARGIDILSITDVIN 506
Query: 410 YDKPAYIKTYIHRAGRTARAGQLGRCFTL 438
YD P + Y+HR GRTARA Q G +TL
Sbjct: 507 YDLPNSSREYVHRVGRTARANQTGHAYTL 535
>sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP6 PE=3 SV=2
Length = 631
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 225/453 (49%), Gaps = 80/453 (17%)
Query: 12 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQ--------ETI 63
L W+ +P+ S E P +K LQ+ G SS F VQV+V + + I
Sbjct: 176 LDWLATPIYASTTETVPFSSFGLSSSMVK-NLQSNGFSSAFSVQVSVLKLLLPDMESQAI 234
Query: 64 GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAA 123
P + DL +N+ TGSGKTL YA+PI+++L NR V +RA+V++PT+ L QVK FA
Sbjct: 235 RPDI-GGDLLVNAATGSGKTLGYAIPIIESLRNRIVPRVRAIVLVPTKPLISQVKATFAM 293
Query: 124 IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRL 183
++ LSV SI DE Q LQ DI+V+TPGRL
Sbjct: 294 LSKNTNLSVVSLRSDISINDEA---------------------QRLQVVPDIIVSTPGRL 332
Query: 184 MDHINATRG-FTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPS 242
++H+ T G L+ L YLV+DE DRLL +++Q W T+ ++R D+ N S+
Sbjct: 333 VEHL--TNGHINLKSLRYLVIDEADRLLNQSFQNWCETL--MSRIDS-NPISELD----- 382
Query: 243 AFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR-- 300
+T R P + K+V SATLT D +L+ L L P + +
Sbjct: 383 -----QTWR-------------PSVQKLVFSATLTTDAGRLSMLKLQRPRLIIVNDRHEL 424
Query: 301 ----YKLPERLESYKL---ICESKLKPLYLVALLQSLGEEKCI---VFTSSVESTHRLCT 350
+ +P L+ YKL S KPL L L S E+K + VF S E++ RLC
Sbjct: 425 VNELFTVPATLQEYKLSLGSARSSAKPLVLAKFLMS--EQKLVNTLVFAKSNEASLRLCR 482
Query: 351 LLNH----FGELRIKIKEYSGLQR-QSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVN 405
LL FG L + + + S R+K LK F + +LV +D + RG+D+ +
Sbjct: 483 LLQLLFRVFG-LDVTVSYLNSTNNAASTRAKILKDFANQTVHILVVTDLIARGIDIATIT 541
Query: 406 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 438
NV+NYD P + Y+HR GRTARA Q G +T+
Sbjct: 542 NVINYDLPNSSRDYVHRVGRTARANQDGEAYTM 574
>sp|A7TFZ9|DBP6_VANPO ATP-dependent RNA helicase DBP6 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP6 PE=3 SV=1
Length = 637
Score = 198 bits (503), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 217/434 (50%), Gaps = 85/434 (19%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSG 81
+DP+L +Q + FP+Q ++ ET+ P L F R D+ +N+ TGSG
Sbjct: 182 IDPKLLKNIQQNFSTDTFPIQ-SILLETLLPTLNFSYNITKKNFTRRVGDVLVNASTGSG 240
Query: 82 KTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSI 141
KTL+Y++PI+Q LS R V LRALV++PT+ L QV + F +A L V ++ ++S+
Sbjct: 241 KTLAYSIPILQILSKRTVNKLRALVIVPTKLLINQVYETFNNLAQGTSLIVSISKLENSL 300
Query: 142 ADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYL 201
+E +L LQ+ DIL+ TPGRL+DH+ + L +L +L
Sbjct: 301 KEENKKL--------------------LQNEPDILITTPGRLVDHLQSG-AVNLRNLKFL 339
Query: 202 VVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKD 261
V+DE DRLL +++Q W +L ++D ++ +P
Sbjct: 340 VLDEADRLLNQSFQNWCNELLNKLKTDKQDH-------MPG------------------- 373
Query: 262 KPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESK 317
+VKMV SATLT + KL L ++P LF+ Y LP L+ Y L ++
Sbjct: 374 ----NIVKMVFSATLTTNTEKLHGLQFYNPKLFVMDSVKLYHLPRMLQEYNLHIPTAKTS 429
Query: 318 LKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKT 377
KPL+L+ LL + K +VF S ES+ RL +L + I+ K S SV S
Sbjct: 430 YKPLFLLRLLSEINGSKMLVFVKSNESSLRLASL----LSIMIEHKLGSQFDINSVNSNN 485
Query: 378 LKA------------FREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGR 425
KA K+QVL+++D M+RG+D+ + +V+NYD P + YIHR GR
Sbjct: 486 TKAENRRIVNEFASNNNTSKVQVLITTDVMSRGVDINDITDVLNYDVPISSQQYIHRCGR 545
Query: 426 TARAGQLGRCFTLL 439
TARA G + +L
Sbjct: 546 TARAQSKGTAYNML 559
>sp|Q6BPT8|DBP6_DEBHA ATP-dependent RNA helicase DBP6 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP6 PE=3 SV=2
Length = 576
Score = 195 bits (495), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 224/454 (49%), Gaps = 74/454 (16%)
Query: 12 LPWMRSPVDVSLFEDCPLDHL--PCLDPRLKVALQNMGISSLFPVQVAVW--------QE 61
L W+ +P+ + E P P L + L+NMG S F VQ++V +
Sbjct: 112 LDWLTTPIYTAPEETKPFAEFQNPPLSSLMIKNLRNMGFESAFSVQISVLNLMLKDIERN 171
Query: 62 TIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVF 121
+ P + DL +N+ TGSGKTL+Y++PI+++L V +RA++++PT+ L QVK
Sbjct: 172 RLQPDM-RGDLLVNASTGSGKTLAYSIPIIESLQTVKVPRVRAIILVPTKPLINQVKTTL 230
Query: 122 AAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAV-DILVATP 180
++ LS+ S+ +++S IK E GI +LQ+ DI+V+TP
Sbjct: 231 NQLSKGTNLSI------VSLKNDLS--IK----EEGI---------KLQTNEPDIIVSTP 269
Query: 181 GRLMDHINATRGF-TLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTF 239
GRL+DH+ T G+ +L++L YLV+DE DRLL +++Q W
Sbjct: 270 GRLVDHL--TNGYISLKNLQYLVIDEADRLLNQSFQNW-------------------CQI 308
Query: 240 LPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGET 299
L S I+ + +K + KM+ SATLT D KL+ L H P +
Sbjct: 309 LISKIDEFTNIKERNISNSWK----LNVQKMIFSATLTTDAGKLSLLKFHKPRLIIVNNK 364
Query: 300 R------YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLC 349
+ LP L +KL +S LKPL L L S + ++FT S +++ RL
Sbjct: 365 EQLVNEMFSLPATLNEFKLQFGSAKSSLKPLILSKFLLSKNKLANVLIFTKSNDASLRLS 424
Query: 350 T----LLNHFGELRIKIKEYSGLQRQ-SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 404
++N G I I + SVRSK LK F + I +LV++D + RG+D+ +
Sbjct: 425 RLLSLIMNKLGSETINIAYINSTNNTTSVRSKILKDFSKQTINILVATDLIARGIDILSI 484
Query: 405 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTL 438
+V+NYD P + Y+HR GRTARA Q G +
Sbjct: 485 TDVINYDLPNSSREYVHRVGRTARANQEGFAYNF 518
>sp|Q59MW2|DBP6_CANAL ATP-dependent RNA helicase DBP6 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP6 PE=3 SV=1
Length = 606
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 215/447 (48%), Gaps = 76/447 (17%)
Query: 13 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFER-- 70
P SP D F D L + L+ MG + F VQ++V + ++
Sbjct: 160 PQYASPSDKKAFTDFKLSSFMIKN------LEKMGFTEAFSVQISVLNMMLPEIEAQKLK 213
Query: 71 -----DLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIA 125
D+ +N+ TGSGKTL+Y++PI+++L R V +R ++++PT+ L QVK ++
Sbjct: 214 PDRVGDILVNASTGSGKTLAYSIPIIESLYRRVVPRVRVIILVPTKPLINQVKSTLLQLS 273
Query: 126 PAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD 185
L + SI DE L K S DI+V+TPGRL++
Sbjct: 274 SGTNLQIAALKNDVSINDEKDSLTK--------------------SVPDIIVSTPGRLVE 313
Query: 186 HINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFG 245
H+ L L YL++DE DRLL +++Q W +L S
Sbjct: 314 HL-LNDSINLSSLQYLIIDEADRLLNQSFQNWSNVLLDKIDSQ----------------I 356
Query: 246 SLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETR----- 300
++ + + V+ K+V SATLT D KL+ L ++P + +++
Sbjct: 357 NIAEVWKLSVQ------------KLVFSATLTTDAGKLSSLKFYNPRLIIVNDSKQLVNE 404
Query: 301 -YKLPERLESYKL---ICESKLKPLYLVALLQSLGE-EKCIVFTSSVESTHRLCTLL-NH 354
+ +P L +K+ + ++ LKPL L L S + ++FT S ES+ RL LL +
Sbjct: 405 IFTVPVTLSEFKIHLGVAKNSLKPLILTKFLISTNKLSNVLIFTKSNESSIRLTELLISL 464
Query: 355 FGELRIKIKE---YSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 411
F +L I +K S R S+RSK LK F ++ +L+++D + RG+DV + +V+NYD
Sbjct: 465 FQKLSINLKIAFINSTNNRTSIRSKILKQFSNQEVNILITTDLIARGIDVASITDVINYD 524
Query: 412 KPAYIKTYIHRAGRTARAGQLGRCFTL 438
P + Y+HR GRTARA Q+G ++
Sbjct: 525 LPNSSREYVHRVGRTARANQVGYAYSF 551
>sp|Q6FST5|DBP6_CANGA ATP-dependent RNA helicase DBP6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP6 PE=3 SV=1
Length = 651
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 219/430 (50%), Gaps = 76/430 (17%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGK 82
L P+L ++ S FP+Q A+ + + F R D+ +N+ TGSGK
Sbjct: 200 LTPKLLNNIEKYFSKSTFPIQTAMLDQYLKLINFTLKTSKKNFTRRIGDILVNASTGSGK 259
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y++PI+QTLS+R V LR L++LPT+ L QV + +A L + ++ ++S
Sbjct: 260 TLAYSIPIIQTLSSRTVNKLRVLIILPTKLLINQVFQTMSQLAEGTSLVITVSKLENSFN 319
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+E L+K + DI + TPGRL+DH+ +L +L +LV
Sbjct: 320 EEHKRLLK--------------------TEPDIFITTPGRLVDHL-TNSSISLRNLKFLV 358
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DRLL +++Q W+P V+ +SD ++ +P +
Sbjct: 359 LDEADRLLNQSFQNWIPEVMSKFKSDKFDQ-------MPGS------------------- 392
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKL 318
++KMV SATLT + KL L L++P LF T Y LP L+ Y+L +S
Sbjct: 393 ----IIKMVFSATLTTNTEKLNDLQLYNPTLFATDSVKLYNLPPTLQEYQLQIPSAKSVY 448
Query: 319 KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN-----HFGELRIKIKEYSGLQRQSV 373
KPLYL+ LL+ L K +VF S ES+ +L LL H L+I + + ++
Sbjct: 449 KPLYLLKLLEQLSGGKTLVFVRSNESSLKLEVLLKSLIKGHMTTLQIVVHSINSNNSKAE 508
Query: 374 RSKTLKAFRE----GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 429
+ + F + + VL+++D M+RG+D+E + NV+NYD P + Y+HR GRTARA
Sbjct: 509 NRRLVTDFTKESLPNQTNVLITTDLMSRGIDIENIANVINYDVPISSQQYVHRCGRTARA 568
Query: 430 GQLGRCFTLL 439
+ G+ + +L
Sbjct: 569 NKDGKAYNML 578
>sp|Q6CKZ4|DBP6_KLULA ATP-dependent RNA helicase DBP6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP6 PE=3 SV=1
Length = 630
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 217/436 (49%), Gaps = 83/436 (19%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETI---------GPGLFER---DLCINSPTGSGK 82
LD RL + + S FP+Q ++ + + LF R D+ +N+ TGSGK
Sbjct: 182 LDARLLKNITSNFSSETFPIQTILFDKVLPLLNSSFKANRKLFTRRVGDILVNASTGSGK 241
Query: 83 TLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIA 142
TL+Y++P+VQ L +R V +RA++++PT+ L QV D + ++ L+V ++ ++S+
Sbjct: 242 TLAYSVPLVQILRSRTVNKVRAIILVPTKILIHQVYDCLSKLSQGTSLNVSMSKLENSLK 301
Query: 143 DEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLV 202
+E ++ L ++ DIL+ TPGRL+DH+ F L+ L +LV
Sbjct: 302 EEHNKF--------------------LYNSPDILIITPGRLVDHLQM-ESFDLKTLKFLV 340
Query: 203 VDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDK 262
+DE DRLL +++Q W + +D ++ +R G
Sbjct: 341 LDEADRLLNQSFQNWNQVLFHHLTNDKQD-------------------KRPG-------- 373
Query: 263 PYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKL 318
++KMV SATLT + KL L LH+P +FLT Y +P++L+ + +S
Sbjct: 374 ---NVIKMVFSATLTTNAEKLYNLYLHNPKIFLTDSVKLYSIPKKLQELNVNIPTAKSLF 430
Query: 319 KPLYLVALLQSLGEE-----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEY-------- 365
KPL L+ ++ + K +VF S E++ RL +LL+ I EY
Sbjct: 431 KPLLLLRIIHDIKSSASRNAKILVFVKSNEASIRLESLLHAMLGSGIIEDEYNMFLSSIH 490
Query: 366 SGLQRQSVRSKTLKAF--REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRA 423
S + + S R K ++ F E K VL+S+D M RG+D+ + +V+NYD P + Y+HR
Sbjct: 491 SNISKGSSR-KLIQEFASSEQKKSVLISTDIMARGIDINEITHVINYDLPISSQQYVHRC 549
Query: 424 GRTARAGQLGRCFTLL 439
GRTARA G LL
Sbjct: 550 GRTARANTEGIAINLL 565
>sp|P53734|DBP6_YEAST ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP6 PE=1 SV=1
Length = 629
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 210/430 (48%), Gaps = 91/430 (21%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R + LR ++++PT+ L QV + L V +A ++S+ DE +L LE
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLE 310
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++Q
Sbjct: 311 P-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQ 352
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
W P ++ ++D + LP ++KM+ SAT
Sbjct: 353 GWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMIFSAT 382
Query: 276 LTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSL 330
LT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++ Q +
Sbjct: 383 LTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQFM 442
Query: 331 GEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR-------------QSV 373
K ++F S ES+ RL LL E R + LQ ++
Sbjct: 443 AHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAE 502
Query: 374 RSKTLKAF----REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 429
K + F I +L+++D M+RG+D+ + V+NYD P + Y+HR GRTARA
Sbjct: 503 NKKIVANFSHHSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARA 562
Query: 430 GQLGRCFTLL 439
+LG + LL
Sbjct: 563 NELGSAYNLL 572
>sp|A6ZSB3|DBP6_YEAS7 ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP6 PE=3 SV=1
Length = 629
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 210/430 (48%), Gaps = 91/430 (21%)
Query: 49 SSLFPVQVAVWQETIGPGL----------FER---DLCINSPTGSGKTLSYALPIVQTLS 95
++ FP+Q ++ ++I P L F R D+ +N+ TGSGKTL+Y++PIVQTL
Sbjct: 195 TNTFPIQ-SIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLF 253
Query: 96 NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLE 155
R + LR ++++PT+ L QV + L V +A ++S+ DE +L LE
Sbjct: 254 KRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKL---SNLE 310
Query: 156 AGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQ 215
DIL+ TPGRL+DH+N + L++L +L++DE DRLL +++Q
Sbjct: 311 P-----------------DILITTPGRLVDHLNM-KSINLKNLKFLIIDEADRLLNQSFQ 352
Query: 216 AWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSAT 275
W P ++ ++D + LP ++KM+ SAT
Sbjct: 353 GWCPKLMSHLKTDKLDT-------LPG-----------------------NVIKMIFSAT 382
Query: 276 LTQDPNKLAQLDLHHP-LFLTTGETRYKLPERLESYKL---ICESKLKPLYLV-ALLQSL 330
LT + KL L+L+ P LFL + Y+LP +L + + +S KPL L+ ++ Q +
Sbjct: 383 LTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSIYKPLILLYSICQFM 442
Query: 331 GEE----KCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQR-------------QSV 373
K ++F S ES+ RL LL E R + LQ ++
Sbjct: 443 AHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAE 502
Query: 374 RSKTLKAF----REGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARA 429
K + F I +L+++D M+RG+D+ + V+NYD P + Y+HR GRTARA
Sbjct: 503 NKKIVANFSHPSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARA 562
Query: 430 GQLGRCFTLL 439
+LG + LL
Sbjct: 563 NELGSAYNLL 572
>sp|Q6CDN5|DBP6_YARLI ATP-dependent RNA helicase DBP6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP6 PE=3 SV=1
Length = 607
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 217/447 (48%), Gaps = 61/447 (13%)
Query: 4 AKKKSMPVLPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAV--W-- 59
++K + P +R+ V + + D L + L +G + F VQ AV W
Sbjct: 165 SRKTQLQTQPILRNATYVEIDDVGSFDEFD-LSKNMMKNLDTLGYTKAFSVQKAVIPWLL 223
Query: 60 --QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQV 117
Q+ + P + DL +++ TGSGKT +Y +PI++ L +R V +RA+VVLPT+ L +QV
Sbjct: 224 AQQKLLAPDR-KPDLLVSASTGSGKTATYGIPIIEKLRDRIVPRIRAVVVLPTKPLVMQV 282
Query: 118 KDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILV 177
+DV ++ LSV ++ ++ S +R LE DI+V
Sbjct: 283 RDVLENLSKGSSLSV------VALRNDRSTKRERAVLETA----------------DIVV 320
Query: 178 ATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDAS 237
A PGRL++ + ++ +LVVDE DRLL + Y W +VLQ +N+ R
Sbjct: 321 AAPGRLVEQVKENPEL-FSYIEFLVVDEADRLLGQDYYDW-ASVLQ----NNQQRAQAGK 374
Query: 238 TFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP-LFLTT 296
T L + +R + ++ SATLT +P +A +D+H+P +F+
Sbjct: 375 TNLTEHY-----VR--------------NMQTLIFSATLTANPEHIASMDIHNPGVFVIG 415
Query: 297 GETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLN--- 353
Y +P+ L + KPL L LL + +VFT S E+ R+ ++
Sbjct: 416 SSDSYSIPKSLTEIVTHVSAAEKPLMLCELLVQRDINRGVVFTKSSETAARVARMMEIMD 475
Query: 354 -HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 412
KI S R +++K F +GKI LV +D ++RG+D V+NV+NYD
Sbjct: 476 ADIFHKDWKIAAVSAETSSVHRRRSMKQFIDGKIDFLVCTDLVSRGIDF-VVDNVINYDI 534
Query: 413 PAYIKTYIHRAGRTARAGQLGRCFTLL 439
P+ + Y+HR GRTARAG+ G +T L
Sbjct: 535 PSGKREYVHRVGRTARAGREGNAYTFL 561
>sp|Q751D1|DBP6_ASHGO ATP-dependent RNA helicase DBP6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP6
PE=3 SV=1
Length = 607
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 207/413 (50%), Gaps = 76/413 (18%)
Query: 52 FPVQVAVWQE---------TIGPGLFER---DLCINSPTGSGKTLSYALPIVQTLSNRAV 99
FP+Q A+ ++ + R D+ +N+ TGSGKTL+YA+ ++ LS R V
Sbjct: 185 FPIQTALLDSVLPLMSQAYSVSKRYYTRKVGDILVNASTGSGKTLAYAMLLIHILSRRTV 244
Query: 100 RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGIC 159
LRA++++PT+ L QV D A+A + V ++ +S+ +E ++L +
Sbjct: 245 NKLRAVILVPTKLLVHQVYDTVQALAKGSSVVVAVSKMDTSLKEESAKLKAQ-------- 296
Query: 160 YDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLP 219
+P D+L+ TPGRL+DH+N + F+L++L +LV+DE DRLL +++Q W
Sbjct: 297 -EP-----------DVLIITPGRLVDHLN-MQTFSLKNLKFLVLDEADRLLNQSFQNWC- 342
Query: 220 TVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQD 279
++ + R ER FK ++KM+ SATLT +
Sbjct: 343 ---------------------------IELMTRLNAERPFKGP--GNVIKMIFSATLTTN 373
Query: 280 PNKLAQLDLHHPLFLTTGETRYKLPERLESYKL---ICESKLKPLYLVALLQSLGEE--K 334
+L L LH+P G Y +P +L+ Y L +S KPL L+ LL L E +
Sbjct: 374 TERLHDLQLHNPKLFLMGSQLYHMPAQLQEYNLPIPTSKSYAKPLILLRLLPLLSTESLR 433
Query: 335 CIVFTSSVESTHRLCTLL-----NHFGELRIKIKEYSGLQRQSVRSKTLKAF---REGKI 386
+VF S E++ RL LL N + + + ++ K ++AF G
Sbjct: 434 ILVFVKSNEASIRLAALLTAMVGNGLSAVSTTVGSINNNNSKATNRKLIEAFAAGASGHC 493
Query: 387 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 439
+LVS+D M+RG+D+ G+++V+NYD P + Y+HR GRTARA G LL
Sbjct: 494 SILVSTDLMSRGLDISGISHVINYDLPISSQQYVHRCGRTARANTSGTAVNLL 546
>sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain
RS) GN=RRP3 PE=3 SV=1
Length = 474
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 185/387 (47%), Gaps = 65/387 (16%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P Q+ E+I L RDL + TGSGKT ++ALPI+Q L ++ + + LV+ PTR+
Sbjct: 71 PTQIQA--ESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKP-QSMFGLVLAPTRE 127
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ F A+ + + + VG + + L K+P
Sbjct: 128 LAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPH------------------- 168
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I+VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +L++
Sbjct: 169 --IIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKV-------- 218
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
LP RR + SAT++ L + L +PL
Sbjct: 219 -------LPKE-------RRT----------------YLFSATMSSKVESLQRASLSNPL 248
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++ +Y+ L LI K K +YL+ LL + I+FT +V T RL LL
Sbjct: 249 RVSVSSNKYQTVSTLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAILL 308
Query: 353 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 412
G I + G QS R L FR +LV++D RG+D+ V+ V+NYD
Sbjct: 309 RALGFGAIPLH---GQLSQSARLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDL 365
Query: 413 PAYIKTYIHRAGRTARAGQLGRCFTLL 439
P+ KTYIHR GRTARAG+ GR F+L+
Sbjct: 366 PSDSKTYIHRVGRTARAGKSGRAFSLV 392
>sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus GN=Ddx47
PE=2 SV=2
Length = 455
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 188/387 (48%), Gaps = 66/387 (17%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 412
+ G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D
Sbjct: 284 RNLGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDI 340
Query: 413 PAYIKTYIHRAGRTARAGQLGRCFTLL 439
P + K YIHR GRTARAG+ G+ T +
Sbjct: 341 PTHSKDYIHRVGRTARAGRSGKAITFV 367
>sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus GN=DDX47
PE=2 SV=1
Length = 457
Score = 178 bits (452), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 188/387 (48%), Gaps = 66/387 (17%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 49 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 105
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 106 LAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPH------------------- 146
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 147 --IVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 202
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 203 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 226
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y L SK K YLV +L L ++F S+ +T R LL
Sbjct: 227 KCAVS-SKYQTVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 285
Query: 353 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 412
+ G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D
Sbjct: 286 RNLGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDI 342
Query: 413 PAYIKTYIHRAGRTARAGQLGRCFTLL 439
P + K YIHR GRTARAG+ G+ T +
Sbjct: 343 PTHSKDYIHRVGRTARAGRSGKAITFV 369
>sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47
PE=1 SV=1
Length = 455
Score = 178 bits (451), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 188/387 (48%), Gaps = 66/387 (17%)
Query: 53 PVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRD 112
P ++ + E I L RD+ + TGSGKT ++ALPI+ L R L ALV+ PTR+
Sbjct: 47 PTKIQI--EAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQR-LFALVLTPTRE 103
Query: 113 LALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSA 172
LA Q+ + F A+ ++G+ + VG + L K+P
Sbjct: 104 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPH------------------- 144
Query: 173 VDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENR 232
I++ATPGRL+DH+ T+GF L L YLV+DE DR+L ++ + +L++ D +
Sbjct: 145 --IIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRK-- 200
Query: 233 FSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPL 292
TFL SAT+T+ KL + L +P+
Sbjct: 201 -----TFL-------------------------------FSATMTKKVQKLQRAALKNPV 224
Query: 293 FLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLL 352
++Y+ E+L+ Y + SK K YLV +L L ++F S+ +T R LL
Sbjct: 225 KCAVS-SKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLL 283
Query: 353 NHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDK 412
+ G I + G QS R +L F+ +L+++D +RG+D+ V+ VVN+D
Sbjct: 284 RNLGFTAIPL---HGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDI 340
Query: 413 PAYIKTYIHRAGRTARAGQLGRCFTLL 439
P + K YIHR GRTARAG+ G+ T +
Sbjct: 341 PTHSKDYIHRVGRTARAGRSGKAITFV 367
>sp|Q7RY59|RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rrp-3 PE=3 SV=1
Length = 515
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/398 (31%), Positives = 188/398 (47%), Gaps = 67/398 (16%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G + P+Q +++I L RD+ + TGSGKT ++ALPI+Q L ++
Sbjct: 104 ACERLGYKNPTPIQ----EQSIPLALQNRDIIGIAETGSGKTAAFALPILQALLDKPA-P 158
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
L ALV+ PTR+LA Q+ F A+ + L L +G + + L K+P
Sbjct: 159 LFALVLAPTRELAAQIAQAFEALGSLISLRCALILGGMDMVTQAIALGKKPH-------- 210
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L + YLV+DE DRLL + L +
Sbjct: 211 -------------VIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKI 257
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+ FLP RR + SAT++
Sbjct: 258 LK---------------FLPRE-------RRT----------------FLFSATMSSKVE 279
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L PL ++ +Y L+S + K YLV L + I+FT +
Sbjct: 280 SLQRASLRDPLKVSVSSNKYATVSTLKSNYVFIPHMHKDTYLVYLCNEFAGQTIIIFTRT 339
Query: 342 VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 401
V T R+ LL G I + + GL QS R L FR G ++LV++D RG+D+
Sbjct: 340 VLETQRIAILLRTLGMGAIPL--HGGLS-QSARLGALNKFRAGSREILVATDVAARGLDI 396
Query: 402 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 439
V+ V+N+D P KTY+HR GRTARAG+ G +++
Sbjct: 397 PNVDCVINHDLPQDSKTYVHRVGRTARAGKSGHAISIV 434
>sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rrp3 PE=3 SV=1
Length = 472
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 185/407 (45%), Gaps = 69/407 (16%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
+ A+ E I L RDL + TGSGKT ++ALPI+Q L ++ LV+ PTR
Sbjct: 72 YKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFF-GLVLAPTR 130
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F + + + + VG + + L K+P
Sbjct: 131 ELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPH------------------ 172
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L +L YLV+DE DRLL + L +L++
Sbjct: 173 ---IIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKV------- 222
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
LP RR + SAT++ L + L +P
Sbjct: 223 --------LPRE-------RRT----------------YLFSATMSSKVESLQRASLQNP 251
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
L + ++++ L+ + K K LYLV LL + CI+F +V T RL
Sbjct: 252 LRVAVSSSKFQTVSTLQQSYIFIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFF 311
Query: 352 LNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYD 411
L G I + G QS R L FR +LV++D RG+D+ V+ V+N+D
Sbjct: 312 LRLLGFGAIPLH---GQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFD 368
Query: 412 KPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEK------KGAIGRSL 452
P KT+IHR GRTARAG+ G + + + +GA+G+ L
Sbjct: 369 LPGDSKTFIHRIGRTARAGKSGVAISFATQYDVEAWLRIEGALGKKL 415
>sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRP3 PE=1 SV=2
Length = 501
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 189/405 (46%), Gaps = 67/405 (16%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQERTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 267 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 325
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 396
+FT + + RL L N L G Q+ R +L F+ GK +LV++D
Sbjct: 326 IFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAA 382
Query: 397 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 441
RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L+ +
Sbjct: 383 RGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQ 427
>sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRP3 PE=3 SV=1
Length = 501
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 188/405 (46%), Gaps = 67/405 (16%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P L A +N+ S P+Q + I P L D+ + TGSGKT ++A+PI+ L +
Sbjct: 90 PELIQACKNLNYSKPTPIQ----SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
Query: 97 RAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEA 156
A ++ PTR+LA Q+K+ F ++ +G+ VG ++ D+ +L+++P
Sbjct: 146 DQ-EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPH--- 201
Query: 157 GICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQA 216
I++ATPGRLMDH+ T+GF+L L +LV+DE DRLL +
Sbjct: 202 ------------------IIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGP 243
Query: 217 WLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATL 276
L +L++ P + SAT+
Sbjct: 244 VLDRILKII-------------------------------------PTQERTTYLFSATM 266
Query: 277 TQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCI 336
T +KL + L +P+ +Y+ + L ++ LK YL+ LL + I
Sbjct: 267 TSKIDKLQRASLTNPVKCAVS-NKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTMI 325
Query: 337 VFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMT 396
+FT + + RL L N L G Q+ R L F+ GK +LV++D
Sbjct: 326 IFTRTKANAERLSGLCNL---LEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAA 382
Query: 397 RGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHK 441
RG+D+ V+ VVNYD P K+YIHR GRTARAG+ G+ +L+ +
Sbjct: 383 RGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQ 427
>sp|Q0CIQ3|RRP3_ASPTN ATP-dependent rRNA helicase rrp3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=rrp3 PE=3 SV=2
Length = 445
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 188/402 (46%), Gaps = 69/402 (17%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRC 101
A + +G ++ P+Q + I L RDL + TGSGKT ++ LP++Q L ++ +
Sbjct: 42 ACEELGYTAPTPIQ----ERCIPIALEGRDLIGLAETGSGKTAAFVLPMLQALMDKP-QQ 96
Query: 102 LRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYD 161
+L++ PTR+LA Q+ A+ + + L +G + + L K+P
Sbjct: 97 FHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQAIALGKKPH-------- 148
Query: 162 PEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTV 221
++VATPGRL+DH+ T+GF+L L YLV+DE DRLL + L +
Sbjct: 149 -------------VIVATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKL 195
Query: 222 LQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPN 281
L+L LP K K Y + SAT++
Sbjct: 196 LRL---------------LP------------------KRKTY------LFSATMSSKVE 216
Query: 282 KLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS 341
L + L P+ ++ + L+SY L K K YLV LL + I+FT +
Sbjct: 217 SLQRASLSDPVRVSVSTKNQTASKLLQSY-LFIPHKFKDFYLVYLLNERAGQMGIIFTRT 275
Query: 342 VESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDV 401
V T RL +L + G I I G QS R +L FR +L+++D RG+D+
Sbjct: 276 VHETQRLSIMLRNLGFPAIPIH---GQLSQSARLASLNKFRARSRNLLIATDVAARGLDI 332
Query: 402 EGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 443
V+ V+NYD P KTYIHR GRTARAG+ G F+ + + E
Sbjct: 333 PAVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYE 374
>sp|P32892|DRS1_YEAST ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DRS1 PE=1 SV=2
Length = 752
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 201/428 (46%), Gaps = 86/428 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 241 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 295
Query: 97 RAVR--CLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 296 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 354
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 355 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 394
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 395 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 416
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 417 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 470
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFRE 383
++ L G+++ +VF + E+ HRL ++ G L + + E G Q R ++ F+
Sbjct: 471 IRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKN 527
Query: 384 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 443
++ VL+ +D +RG+D+ + V+NYD P + Y+HR GRTARAG+ GR T + +
Sbjct: 528 LEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVGESS 587
Query: 444 KKGAIGRS 451
+ +I R+
Sbjct: 588 QDRSIVRA 595
>sp|A7A0P8|DRS1_YEAS7 ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DRS1 PE=3 SV=1
Length = 754
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 201/428 (46%), Gaps = 86/428 (20%)
Query: 37 PRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSN 96
P LK L ++G P+Q A TI L +D+ + TGSGKT ++ +PI++ L
Sbjct: 243 PVLK-GLASLGYVKPSPIQSA----TIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 297
Query: 97 RAVR--CLRALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIADEISELIKRPK 153
+ + R +V+LPTR+LA+QV DV IA V G++ GLAVG ++ + L RP
Sbjct: 298 KPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRP- 356
Query: 154 LEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREA 213
DI++ATPGR +DHI + F ++ + LV+DE DR+L E
Sbjct: 357 --------------------DIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEG 396
Query: 214 YQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLS 273
+Q L ++ L S+ +N ++ S
Sbjct: 397 FQDELNEIMGLLPSNRQN--------------------------------------LLFS 418
Query: 274 ATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICE-------SKLKPLYLVAL 326
AT+ L L L P+ + P + + KL E LKP L L
Sbjct: 419 ATMNSKIKSLVSLSLKKPVRIMID------PPKKAATKLTQEFVRIRKRDHLKPALLFNL 472
Query: 327 LQSL---GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFRE 383
++ L G+++ +VF + E+ HRL ++ G L + + E G Q R ++ F+
Sbjct: 473 IRKLDPTGQKRIVVFVARKETAHRLRIIM---GLLGMSVGELHGSLTQEQRLDSVNKFKN 529
Query: 384 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 443
++ VL+ +D +RG+D+ + V+NYD P + Y+HR GRTARAG+ GR T + +
Sbjct: 530 LEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVGESS 589
Query: 444 KKGAIGRS 451
+ +I R+
Sbjct: 590 QDRSIVRA 597
>sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRP3 PE=3 SV=1
Length = 484
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 190/405 (46%), Gaps = 68/405 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+ P L A +MG +Q E I L +D+ + TGSGKT +++LPI+QTL
Sbjct: 45 ISPELCRACASMGFKKPSDIQA----EAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTL 100
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ ALV+ PTR+LA Q+ ++ +G+ + VG + + L KRP
Sbjct: 101 WENP-QPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPH- 158
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I+VATPGRLMDH+ T+GF+L+ L YLV+DE DRLL +
Sbjct: 159 --------------------IIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDF 198
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ +L++ + +T+L SA
Sbjct: 199 GPIIDKILKVIPKER-------NTYL-------------------------------FSA 220
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + L+ P+ + ++Y L + L+ K K YL+ L L
Sbjct: 221 TMTTKVAKLQRASLNKPVRVEV-SSKYSTVSTLLQHYLLLPLKNKDAYLLYLANELSSSS 279
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 394
++FT +V + RL +L G I + G QS+R +L F+ G +LV++D
Sbjct: 280 MMIFTRTVADSQRLSIILRRLGFPAIPLH---GQMTQSLRLASLNKFKSGGRSILVATDV 336
Query: 395 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 439
+RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G+ TL+
Sbjct: 337 ASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLV 381
>sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRP3 PE=3 SV=1
Length = 484
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 190/405 (46%), Gaps = 68/405 (16%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
+ P L A +MG +Q E I L +D+ + TGSGKT +++LPI+QTL
Sbjct: 45 ISPELCRACASMGFKKPSDIQA----EAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTL 100
Query: 95 SNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
+ ALV+ PTR+LA Q+ ++ +G+ + VG + + L KRP
Sbjct: 101 WENP-QPFFALVLAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPH- 158
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
I+VATPGRLMDH+ T+GF+L+ L YLV+DE DRLL +
Sbjct: 159 --------------------IIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDF 198
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ +L++ + +T+L SA
Sbjct: 199 GPIIDKILKVIPKER-------NTYL-------------------------------FSA 220
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+T KL + L+ P+ + ++Y L + L+ K K YL+ L L
Sbjct: 221 TMTTKVAKLQRASLNKPVRVEV-SSKYSTVSTLLQHYLLLPLKNKDAYLLYLANELSSSS 279
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 394
++FT +V + RL +L G I + G QS+R +L F+ G +LV++D
Sbjct: 280 MMIFTRTVADSQRLSIILRRLGFPAIPLH---GQMTQSLRLASLNKFKSGGRSILVATDV 336
Query: 395 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 439
+RG+D+ V+ V+NYD P K Y+HR GRTARAG+ G+ TL+
Sbjct: 337 ASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLV 381
>sp|A4RGD1|RRP3_MAGO7 ATP-dependent rRNA helicase RRP3 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=RRP3 PE=3 SV=1
Length = 538
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 181/390 (46%), Gaps = 67/390 (17%)
Query: 52 FPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTR 111
F + ++ I L RD+ + TGSGKT ++ALPI+Q+L + + L LV+ PTR
Sbjct: 130 FKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQSLLEKP-QPLFGLVLAPTR 188
Query: 112 DLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQS 171
+LA Q+ F A+ ++ L + VG + + + L K+P
Sbjct: 189 ELAAQIGQTFEALGASISLRCAVVVGGLDMVSQSTALGKKPH------------------ 230
Query: 172 AVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNEN 231
I+VATPGRL+DH+ T+GF+L L +LV+DE DRLL + L +L+
Sbjct: 231 ---IVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKILK-------- 279
Query: 232 RFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP 291
FLP RR + SAT++ L + L P
Sbjct: 280 -------FLPRE-------RRT----------------FLFSATMSSKVESLQRASLRDP 309
Query: 292 LFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTL 351
L ++ ++ K L L K K +YL+ L + IVFT +V R+ L
Sbjct: 310 LKVSVSSSQEKTVSTLIQNPLFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSIL 369
Query: 352 LN--HFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVN 409
L FG + + G QS+R L F+ +LV++D RG+D+ V+ V+N
Sbjct: 370 LRTLSFGAIPL-----HGQLSQSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVIN 424
Query: 410 YDKPAYIKTYIHRAGRTARAGQLGRCFTLL 439
+D P TYIHR GRTARAG+ GR +++
Sbjct: 425 FDMPQDSMTYIHRVGRTARAGRSGRAISII 454
>sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DRS1 PE=3 SV=1
Length = 808
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 203/434 (46%), Gaps = 72/434 (16%)
Query: 31 HLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPI 90
H L ++ L +G + P+Q + I + +D+ + TGSGKT ++ +PI
Sbjct: 288 HAMSLSRPIQKGLAAIGFTEPTPIQA----KAIPIAMQGKDVVGGAETGSGKTAAFLIPI 343
Query: 91 VQTLSNR--AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISEL 148
++ L R V R + +PTR+LA+Q +V +A ++ L G
Sbjct: 344 LERLLYRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDITFALLAG----------- 392
Query: 149 IKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDR 208
G ++V+ L++ D+++ATPGR +DH++ T F +EHL LV+DE DR
Sbjct: 393 --------GFSSREQEVM--LKTRPDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADR 442
Query: 209 LLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLV 268
+L E ++ L +L T +P + +
Sbjct: 443 MLEEGFETQLNEIL---------------TTIPKSRQT---------------------- 465
Query: 269 KMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKP--LYLVAL 326
M+ SAT+T +KL ++ + P+ L ++ + + + + + K YL+ +
Sbjct: 466 -MLFSATMTSTVDKLIRIGMDKPVRLMVDAKKHTVKGLTQEFIRLRQGKEDKRLAYLMYI 524
Query: 327 LQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKI 386
+ + E+ I+F + HR+ + G +K E G Q R + ++AFR GK
Sbjct: 525 CEKIYTERVIIFFRQKKEAHRVRVVFALCG---LKASELHGNMSQEQRIQAVEAFRSGKS 581
Query: 387 QVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKKG 446
L+++D +RG+D++ V+ V+NY+ P + Y+HR GRTARAG+ GR TL + ++K
Sbjct: 582 SYLLATDVASRGLDIKNVSTVINYEAPQSHEIYLHRVGRTARAGRSGRACTLAAEPDRK- 640
Query: 447 AIGRSLFHQSRVLG 460
+ + QSR G
Sbjct: 641 -VVKQAVKQSRDQG 653
>sp|P25888|RHLE_ECOLI ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12)
GN=rhlE PE=1 SV=3
Length = 454
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 189/418 (45%), Gaps = 77/418 (18%)
Query: 35 LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTL 94
L P + A+ G P+Q Q+ I L RDL ++ TG+GKT + LP++Q L
Sbjct: 8 LSPDILRAVAEQGYREPTPIQ----QQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63
Query: 95 SNR-----AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELI 149
R R +RAL++ PTR+LA Q+ G V S I L+
Sbjct: 64 ITRQPHAKGRRPVRALILTPTRELAAQI---------------GENVRDYSKYLNIRSLV 108
Query: 150 KRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMD--HINATRGFTLEHLCYLVVDETD 207
+ G+ +P+ + +L+ VD+LVATPGRL+D H NA + L+ + LV+DE D
Sbjct: 109 ----VFGGVSINPQ--MMKLRGGVDVLVATPGRLLDLEHQNAVK---LDQVEILVLDEAD 159
Query: 208 RLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRL 267
R+L G + IRR P R
Sbjct: 160 RML--------------------------------DMGFIHDIRRV-----LTKLPAKRQ 182
Query: 268 VKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALL 327
++ SAT + D LA+ LH+PL + R +++ + + K K L ++
Sbjct: 183 -NLLFSATFSDDIKALAEKLLHNPLEIEVAR-RNTASDQVTQHVHFVDKKRKRELLSHMI 240
Query: 328 QSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQ 387
++ +VFT + + L LN G I+ G + Q R++ L F+ G I+
Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDG---IRSAAIHGNKSQGARTRALADFKSGDIR 297
Query: 388 VLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKK 445
VLV++D RG+D+E + +VVNY+ P + Y+HR GRT RA G +L+ DE K
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355
>sp|P0CQ82|DBP4_CRYNJ ATP-dependent RNA helicase DBP4 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP4 PE=3 SV=1
Length = 859
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 72/438 (16%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P +++LF + P+ + + L++ + P+Q I P L RD+ ++
Sbjct: 56 PSEITLFSELPMSS------KTQKGLKSSHFLNPTPIQSLA----IPPALQARDILGSAK 105
Query: 78 TGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGL 134
TGSGKTL++ +P+++ L + L A+V+ PTR+LA+Q I S GL
Sbjct: 106 TGSGKTLAFLIPLLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYHNFSAGL 165
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
+G + +E QE ++IL+ATPGRL+ H+++T GF
Sbjct: 166 VIGGKPLKEE----------------------QERLGRMNILIATPGRLLQHLDSTVGFD 203
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
+ LV+DE DRLL + L ++ + FS T A GS
Sbjct: 204 SSAVKVLVLDEADRLLDLGFLPALKAIV--------SHFSPVQT----APGS-------- 243
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK--LPERLESYKL 312
P ++ SAT ++D LA+L L+ PL+++ + + +P LE Y
Sbjct: 244 ---------RPSRQTLLFSATQSKDLAALAKLSLYEPLYISCNKPGEEGVMPANLEQYYA 294
Query: 313 IC--ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR--IKIKEYSGL 368
+ E KL L+ ++S + K IVF +S + R+ + F L + + G
Sbjct: 295 VVPLERKLDALW--GFVKSHLKMKGIVFVTSGKQARRVRFIFETFRRLHPGLPLMHLHGK 352
Query: 369 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 428
Q+Q R + F K +L+ +D RG+D V+ V+ D P + TYIHR GRTAR
Sbjct: 353 QKQPTRLDIFQRFSSSKSALLICTDVAARGLDFPAVDWVIQLDCPDDVDTYIHRVGRTAR 412
Query: 429 AGQLGRCFTLLHKDEKKG 446
G T+L E++G
Sbjct: 413 YQSAGTALTILCPSEEEG 430
>sp|P0CQ83|DBP4_CRYNB ATP-dependent RNA helicase DBP4 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP4 PE=3 SV=1
Length = 859
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 72/438 (16%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P +++LF + P+ + + L++ + P+Q I P L RD+ ++
Sbjct: 56 PSEITLFSELPMSS------KTQKGLKSSHFLNPTPIQSLA----IPPALQARDILGSAK 105
Query: 78 TGSGKTLSYALPIVQTLSNRA---VRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGL 134
TGSGKTL++ +P+++ L + L A+V+ PTR+LA+Q I S GL
Sbjct: 106 TGSGKTLAFLIPLLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYHNFSAGL 165
Query: 135 AVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT 194
+G + +E QE ++IL+ATPGRL+ H+++T GF
Sbjct: 166 VIGGKPLKEE----------------------QERLGRMNILIATPGRLLQHLDSTVGFD 203
Query: 195 LEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCG 254
+ LV+DE DRLL + L ++ + FS T A GS
Sbjct: 204 SSAVKVLVLDEADRLLDLGFLPALKAIV--------SHFSPVQT----APGS-------- 243
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYK--LPERLESYKL 312
P ++ SAT ++D LA+L L+ PL+++ + + +P LE Y
Sbjct: 244 ---------RPSRQTLLFSATQSKDLAALAKLSLYEPLYISCNKPGEEGVMPANLEQYYA 294
Query: 313 IC--ESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR--IKIKEYSGL 368
+ E KL L+ ++S + K IVF +S + R+ + F L + + G
Sbjct: 295 VVPLERKLDALW--GFVKSHLKMKGIVFVTSGKQARRVRFIFETFRRLHPGLPLMHLHGK 352
Query: 369 QRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTAR 428
Q+Q R + F K +L+ +D RG+D V+ V+ D P + TYIHR GRTAR
Sbjct: 353 QKQPTRLDIFQRFSSSKSALLICTDVAARGLDFPAVDWVIQLDCPDDVDTYIHRVGRTAR 412
Query: 429 AGQLGRCFTLLHKDEKKG 446
G T+L E++G
Sbjct: 413 YQSAGTALTILCPSEEEG 430
>sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus
GN=Ddx52 PE=2 SV=1
Length = 598
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 195/431 (45%), Gaps = 70/431 (16%)
Query: 18 PVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSP 77
P ++ F+ LD + PRL LQN+ + + F V + + I L R+L ++P
Sbjct: 158 PDPIATFQQ--LDQEYKISPRL---LQNI-LDAGFQVPTPIQMQAIPVMLHGRELLASAP 211
Query: 78 TGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVG 137
TGSGKTL++++PI+ L + RALV+ PTR+LA Q+ I+ G + + +
Sbjct: 212 TGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGTGFRIHM-IH 270
Query: 138 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATR-GFTLE 196
+++IA + + P+ DILV TP RL+ + G L
Sbjct: 271 KAAIAAK--------------KFGPKS-----SKKFDILVTTPNRLIYLLKQEPPGIDLT 311
Query: 197 HLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSD--ASTFLPSAFGSLKTIRRCG 254
+ +LVVDE+D+L D + F D AS FL
Sbjct: 312 SVEWLVVDESDKLF----------------EDGKTGFRDQLASIFLACT----------- 344
Query: 255 VERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLIC 314
P++ + + SAT D + +L+L + + ++ G R E +E L
Sbjct: 345 ---------SPKVRRAMFSATFAYDVEQWCKLNLDNIVSVSIG-ARNSAVETVEQELLFV 394
Query: 315 ESKL-KPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSV 373
S+ K L + L++ +VF S+E L L + G I + + Q
Sbjct: 395 GSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHELIYEG---INVDVIHAERTQQQ 451
Query: 374 RSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG 433
R T+ +FR GKI VL+ + + RG+D +GVN V+NYD P YIHR GRT RAG G
Sbjct: 452 RDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRG 511
Query: 434 RCFTLLHKDEK 444
+ T +D+K
Sbjct: 512 KAVTFFTEDDK 522
>sp|Q6AZV7|DDX55_XENLA ATP-dependent RNA helicase DDX55 OS=Xenopus laevis GN=ddx55 PE=2
SV=1
Length = 594
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 195/433 (45%), Gaps = 93/433 (21%)
Query: 30 DHLPC-LDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYAL 88
D LP L+ ++ L+ + + + PVQ A TI + +D+ + TGSGKTL++ +
Sbjct: 10 DSLPQKLNGSIRRTLEELKFTHMTPVQSA----TIPLFMNNKDIAAEAITGSGKTLAFVI 65
Query: 89 PIVQTLSNRAVRCLR----ALVVLPTRDLALQVKDVFAAIAPAV-GLSVGLAVGQSSIAD 143
P+++ L R + + AL++ PTR+LA+Q+ +V + S L +G S+ D
Sbjct: 66 PLLEILLKREEKLKKNQVGALIITPTRELAVQIDEVLSCFTKHFPQFSQILLIGGSNPVD 125
Query: 144 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHI-NATRGFTL----EHL 198
DV + + +I+VATPGRL D G L + L
Sbjct: 126 --------------------DVRKFKEHGGNIIVATPGRLEDMFRRQADGLDLVICVKTL 165
Query: 199 CYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERG 258
L++DE DRLL ++A + T+L FLP RR G
Sbjct: 166 DVLILDEADRLLDMGFEASINTIL---------------GFLPKQ-------RRTG---- 199
Query: 259 FKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGE------TRYKLPERLESYKL 312
+ SAT TQ+ L + L +P+ + E + K P RL++Y +
Sbjct: 200 ------------LFSATQTQELENLVRAGLRNPVRIAVKEKGVAATSTQKTPIRLQNYYM 247
Query: 313 ICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR------IKIKEYS 366
IC++ K L+A LQ +EK +VF S+ C + ++G+ +K+
Sbjct: 248 ICKADEKFNKLIAFLQKRKQEKHLVFFST-------CACVEYYGKALEMLLKPVKVMCIH 300
Query: 367 GLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRT 426
G + R++ FR+ +LV +D M RG+D+ VN VV YD P+ ++HR GRT
Sbjct: 301 GKMKHK-RNRIFTEFRKINSGILVCTDVMARGIDIHEVNWVVQYDPPSSASAFVHRCGRT 359
Query: 427 ARAGQLGRCFTLL 439
AR G G L
Sbjct: 360 ARIGHHGSALVFL 372
>sp|A1CTZ2|DBP4_ASPCL ATP-dependent RNA helicase dbp4 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp4 PE=3 SV=1
Length = 823
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 179/406 (44%), Gaps = 65/406 (16%)
Query: 49 SSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNR---AVRCLRAL 105
SS F + I L RD+ + TGSGKTL++ +P+++ L R L AL
Sbjct: 66 SSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENLYRRQWAEHDGLGAL 125
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
++ PTR+LA+Q+ +V I S GL +G S+ +E
Sbjct: 126 ILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLREE--------------------- 164
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
QE ++ILV TPGR++ H++ T F +L LV+DE DR+L +Q + ++
Sbjct: 165 -QERLGRMNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIV--- 220
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
G L R+ ++ SAT T+ + LA+
Sbjct: 221 -------------------GHLPKERQT----------------LLFSATQTKKVSDLAR 245
Query: 286 LDLHHPLFLTTGET-RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
L L P ++ ET P +L+ + +I K L + ++S + K +VF SS +
Sbjct: 246 LSLRDPEYVAVHETASTATPAKLQQHYVIAPLPQKLDILWSFIRSNLKSKTMVFFSSGKQ 305
Query: 345 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 404
+ H + I + G Q+Q R + F + K VL S+D RG+D V
Sbjct: 306 VRFVYESFRHM-QPGIPLMHLHGRQKQGGRLDIMTNFSQAKHCVLFSTDVAARGLDFPAV 364
Query: 405 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKKGAIGR 450
+ V+ D P TYIHR GRTAR G+ GR L E++G + R
Sbjct: 365 DWVIQMDCPEDADTYIHRVGRTARYGRDGRAVLFLDPSEEEGMLKR 410
>sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana
GN=RH21 PE=2 SV=1
Length = 733
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 186/411 (45%), Gaps = 60/411 (14%)
Query: 42 ALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLS------ 95
A++ G P+Q+A I GL +RD+ + TGSGKT ++ LP++ +S
Sbjct: 327 AVERAGYKKPSPIQMAA----IPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMS 382
Query: 96 -NRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKL 154
A+V+ PTR+LA Q+++ A +G V VG SI
Sbjct: 383 EENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIE------------ 430
Query: 155 EAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAY 214
E G+ ++ +I++ATPGRL+D + R L Y+V+DE DR++ +
Sbjct: 431 EQGL---------KITQGCEIVIATPGRLIDCLE-RRYAVLNQCNYVVLDEADRMIDMGF 480
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
+ + VL S N K I R + SA
Sbjct: 481 EPQVAGVLDAMPSSN------LKPENEEEELDEKKIYRT---------------TYMFSA 519
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYLVALLQSLGEEK 334
T+ +LA+ L +P+ +T G T K + + + ++ + K L LL LGE+
Sbjct: 520 TMPPGVERLARKYLRNPVVVTIG-TAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKT 578
Query: 335 CIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDA 394
IVF ++ ++ + L+ G ++ G + Q R +L+ FR + VLV++D
Sbjct: 579 AIVFVNTKKNCDSIAKNLDKAG---YRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDV 635
Query: 395 MTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLG--RCFTLLHKDE 443
+ RG+D+ V +V+NYD P +I+ Y HR GRT RAG+ G F LH E
Sbjct: 636 VGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTE 686
>sp|Q2UHB7|DBP4_ASPOR ATP-dependent RNA helicase dbp4 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp4 PE=3 SV=1
Length = 796
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 177/406 (43%), Gaps = 65/406 (16%)
Query: 49 SSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRAL 105
SS F + IG L RD+ + TGSGKTL++ +P+++ L + L AL
Sbjct: 62 SSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVLENLYRKQWSEHDGLGAL 121
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
++ PTR+LA+Q+ +V I S GL +G S+ +E
Sbjct: 122 ILSPTRELAIQIFEVLRKIGRYHTFSAGLIIGGKSLKEE--------------------- 160
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
QE ++ILV TPGR++ H++ T F + +L LV+DE DR+L +Q + ++
Sbjct: 161 -QERLGRMNILVCTPGRMLQHLDQTAMFDVFNLQMLVLDEADRILDMGFQKTVDAIV--- 216
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
G L R+ ++ SAT T+ + LA+
Sbjct: 217 -------------------GHLPKERQT----------------LLFSATQTKKVSDLAR 241
Query: 286 LDLHHPLFLTTGET-RYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
L L P ++ ET P L+ + ++ K L + ++S + K IVF SS +
Sbjct: 242 LSLQDPEYVAVHETASSATPSTLQQHYVVTPLSQKLDVLWSFIRSNLKAKTIVFLSSGKQ 301
Query: 345 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 404
+ H + I + G Q+Q R F + K VL S+D RG+D V
Sbjct: 302 VRFVYESFRHL-QPGIPLMHLHGRQKQGGRLDITAKFSQAKHAVLFSTDITARGLDFPAV 360
Query: 405 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKKGAIGR 450
+ V+ D P TYIHR GRTAR + GR L E+ G + R
Sbjct: 361 DWVIQMDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEESGMLKR 406
>sp|Q6BGU8|DBP8_DEBHA ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP8 PE=3 SV=2
Length = 441
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 188/409 (45%), Gaps = 71/409 (17%)
Query: 39 LKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCIN-SPTGSGKTLSYALPIVQTLSNR 97
L AL +M I + +Q A P + + CI + TGSGKT+++A P++ S
Sbjct: 12 LSEALNSMKIHTPTTIQSACI-----PKILKGHDCIGGAKTGSGKTIAFAAPMLTQWSED 66
Query: 98 AVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAG 157
+ LV+ PTR+LALQ+ + FAA+ ++ + V + VG I + EL +RP
Sbjct: 67 P-SGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQALELQRRPHF--- 122
Query: 158 ICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFT---LEHLCYLVVDETDRLLREAY 214
+VATPGRL DHI + T L + YL++DE DRLL ++
Sbjct: 123 ------------------VVATPGRLADHILNSGEDTVCGLRRVKYLILDEADRLLSNSF 164
Query: 215 QAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSA 274
L + S ++ + T L +A T+ R KD+P P+
Sbjct: 165 GGDLERCFNILPSTDKRQ-----TLLFTA-----TV--TDAVRALKDRPVPK-------- 204
Query: 275 TLTQDPNKLAQLDLHHPLFLTTGET--RYKLPERLESYKLICESKLKPLYLVALLQ--SL 330
KL P+F+ ET + +P L + S +K YL ++L
Sbjct: 205 ------GKL-------PVFIHEVETVDKVAIPSTLSVKYVFVPSYVKEAYLHSILNLPQY 251
Query: 331 GEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLV 390
+ I+FT+ + L L +L ++ Q+ R+ +L F+ G ++L+
Sbjct: 252 SDSLSIIFTNRTATAELLRRTLR---KLEFRVASLHSEMPQTERTNSLHRFKAGAAKILI 308
Query: 391 SSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLL 439
++D +RG+D+ V VVNYD PA +IHR GRTARAG+ G +++
Sbjct: 309 ATDVASRGLDIPTVELVVNYDIPADADDFIHRVGRTARAGRKGDAISIV 357
>sp|Q54Q94|DDX10_DICDI Probable ATP-dependent RNA helicase ddx10 OS=Dictyostelium
discoideum GN=ddx10 PE=3 SV=1
Length = 878
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 71/387 (18%)
Query: 70 RDLCINSPTGSGKTLSYALPIVQTL-SNRAVR--CLRALVVLPTRDLALQVKDVFAAIAP 126
RD+ + TGSGKTLS+ LPI++TL NR R + A+V+ PTR+LA+Q+ DV A+
Sbjct: 179 RDILGAAKTGSGKTLSFILPILETLWRNRWGRDDGIGAIVLSPTRELAIQIFDVLKAVGK 238
Query: 127 AVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDH 186
S GL +G ++ E ++ +A++IL+ATPGRL+ H
Sbjct: 239 YHTFSAGLIIGGRNVQQEKDKI----------------------NAMNILIATPGRLLQH 276
Query: 187 INATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGS 246
++ T GF +L LV+DE DR+L + L +++ EN LP +
Sbjct: 277 MDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIV-------EN--------LPRERQT 321
Query: 247 LKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRY-KLPE 305
L + SAT T+ LA+L L P +++ E P+
Sbjct: 322 L-----------------------LFSATQTKSIRDLARLSLQEPEYISVYEKDITTTPQ 358
Query: 306 RLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSS---VESTHRLCTLLNHFGELRIKI 362
L + ++K L + +++ K IVF +S V H LLN L
Sbjct: 359 NLTQTLCVIPLEMKLNMLFSFIKTHLTSKIIVFFASCKQVRFAHETFKLLNPGTTLF--- 415
Query: 363 KEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHR 422
G +Q R + + F + K L ++D RG+D V V+ D P I+TYIHR
Sbjct: 416 -PLHGKMKQWTRLEVFEDFCKKKAGTLFATDIAARGLDFPAVEWVIQVDCPDDIETYIHR 474
Query: 423 AGRTARAGQLGRCFTLLHKDEKKGAIG 449
GRTAR G+ T+L EK G +
Sbjct: 475 VGRTARNDAPGQSITILLPSEKDGMVN 501
>sp|Q6BJX6|DHH1_DEBHA ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DHH1 PE=3 SV=2
Length = 516
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 184/421 (43%), Gaps = 76/421 (18%)
Query: 24 FEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKT 83
FED PL L + + G PVQ +E+I L RD+ + G+GKT
Sbjct: 32 FEDFPLKR------ELLMGIFEAGFEKPSPVQ----EESIPMALAGRDILARAKNGTGKT 81
Query: 84 LSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIAD 143
S+ +P +Q + V ++AL+++PTR+LALQ V + +GL + G +S+ D
Sbjct: 82 ASFVIPCLQQARPK-VNKIQALILVPTRELALQTSQVVRTLGKHLGLQCMVTTGGTSLRD 140
Query: 144 EISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVV 203
+I L DP V +LV TPGR++D + + + L V+
Sbjct: 141 DILRL-----------NDP----------VHVLVGTPGRVLD-LASRKVADLSECPLFVM 178
Query: 204 DETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKP 263
DE D++L ++ + +L F P+ SL
Sbjct: 179 DEADKMLSREFKGIIEQIL---------------AFFPTTRQSL-----------LFSAT 212
Query: 264 YPRLVKMVLSATLTQDPNKLAQLDLHHPLFLTTGETRYKLPERLESYKLICESKLKPLYL 323
+P VK + LT K +++L L L Y E E KL C L
Sbjct: 213 FPLAVKSFMDQHLT----KPYEINLMDELTLRGISQFYAFVE--EKQKLHC--------L 258
Query: 324 VALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFRE 383
L L + I+F + ST+R+ L EL Q R+K FR+
Sbjct: 259 NTLFSKLQINQAIIFCN---STNRVELLAKKITELGYSCYYSHAKMPQHARNKVFHEFRQ 315
Query: 384 GKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDE 443
GK++VLV SD +TRG+D++ VN V+N+D P +TY+HR GR+ R G LG L+ ++
Sbjct: 316 GKVRVLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWND 375
Query: 444 K 444
+
Sbjct: 376 R 376
>sp|Q5AF95|DBP4_CANAL ATP-dependent RNA helicase DBP4 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP4 PE=3 SV=1
Length = 765
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 201/444 (45%), Gaps = 84/444 (18%)
Query: 21 VSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETIGPGLFERDLCINSPTGS 80
VS F D LP + LK L+ SL +Q ++TI L DL + TGS
Sbjct: 47 VSQFSD-----LPITENTLK-GLKEATFVSLTDIQ----KKTIPIALKGEDLMGTARTGS 96
Query: 81 GKTLSYALPIVQTLSNRAV---RCLRALVVLPTRDLALQVKDVFAAIAPAVGLSVGLAVG 137
GKTL++ +P++++L + L AL+V PTR+LA+Q+ +V I S GL G
Sbjct: 97 GKTLAFLIPVIESLIRNKITEYDGLAALIVSPTRELAVQIFEVLTKIGKYNTFSAGLVTG 156
Query: 138 QSSIADEISELIKRPKLEAGICYDPEDVLQELQSAVDILVATPGRLMDHINATRGFTLEH 197
+ E +E S ++ILV TPGR+ H+N G +
Sbjct: 157 GKDVQFE----------------------KERVSRMNILVGTPGRISQHLNEAVGMETSN 194
Query: 198 LCYLVVDETDRLLREAYQAWLPTVLQLTRSDNENRFSDASTFLPSAFGSLKTIRRCGVER 257
L LV+DE DR L ++ + +L G L T R+
Sbjct: 195 LQVLVLDEADRCLDMGFKKQIDNIL----------------------GHLPTTRQT---- 228
Query: 258 GFKDKPYPRLVKMVLSATLTQDPNKLAQLDLHHP--LFLTTGETRYKLPERLESY--KLI 313
++ SAT ++ N LA+L L +P + +++ + PE LE Y K+
Sbjct: 229 ------------LLFSATQSESVNDLARLSLTNPNKIGVSSDQEVSATPESLEQYYVKVP 276
Query: 314 CESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCTLLNHFGELR--IKIKEYSGLQRQ 371
+ KL L+ + ++S + K +VF S S+ ++ F L+ I + + G +Q
Sbjct: 277 LDEKLDVLW--SFIKSHLKSKILVFFS---SSKQVQYTYETFRTLQPGISLMKLYGRHKQ 331
Query: 372 SVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGVNNVVNYDKPAYIKTYIHRAGRTARAGQ 431
+ R +T F + + L ++D + RG+D ++ VV D P TY+HR GR+AR G+
Sbjct: 332 TSRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFGR 391
Query: 432 LGRCFTLLHKDEKKGAIGRSLFHQ 455
G+ +L E++G + R H+
Sbjct: 392 KGKSLLMLLPSEEEGMLKRLKIHK 415
>sp|Q5BFU1|DBP4_EMENI ATP-dependent RNA helicase dbp4 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp4
PE=3 SV=1
Length = 812
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 178/414 (42%), Gaps = 67/414 (16%)
Query: 49 SSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVR---CLRAL 105
SS F + I L RD+ + TGSGKTL++ +PI++ L + L AL
Sbjct: 65 SSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILENLYRKQWSDHDGLGAL 124
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
++ PTR+LA+Q+ +V I S GL +G S+ +E
Sbjct: 125 IISPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEE--------------------- 163
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
QE ++ILV TPGR++ H++ T F +L LV+DE DR++ +Q + ++
Sbjct: 164 -QERLGRMNILVCTPGRMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAII--- 219
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
LP P ++ SAT T+ + LA+
Sbjct: 220 ------------GHLP-----------------------PERQTLLFSATQTKKVSDLAR 244
Query: 286 LDLHHPLFLTTGE-TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
L L P ++ E P +L+ + ++ K L + ++S + K IVF SS +
Sbjct: 245 LSLQDPEYVAVHEAASSATPSKLQQHYVVTPLPQKLDTLWSFIRSNLKSKTIVFMSSGKQ 304
Query: 345 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 404
+ H + I + G Q+Q R F + + VL S+D RG+D V
Sbjct: 305 VRFVYESFRHM-QPGIPLLHLHGRQKQGGRLDITTRFSQAQHAVLFSTDVAARGLDFPAV 363
Query: 405 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKKGAIGRSLFHQSRV 458
+ V+ D P TYIHR GRTAR + GR L E+KG + R Q RV
Sbjct: 364 DWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEKGMLRR--LEQKRV 415
>sp|A7ESL8|DBP4_SCLS1 ATP-dependent RNA helicase dbp4 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=dbp4 PE=3 SV=1
Length = 808
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 180/406 (44%), Gaps = 65/406 (16%)
Query: 49 SSLFPVQVAVWQETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRA---VRCLRAL 105
+S F V + + L +D+ + TGSGKTL++ +P+++ L + + L AL
Sbjct: 66 ASHFKTLTDVQSKAVPLALKGKDILGAAKTGSGKTLAFLVPVLENLYRQKWTELDGLGAL 125
Query: 106 VVLPTRDLALQVKDVFAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDV 165
++ PTR+LA+Q+ +V I S GL +G S+ +E L +
Sbjct: 126 IISPTRELAIQIFEVLRKIGRYHTFSAGLIIGGRSLQEERERLGR--------------- 170
Query: 166 LQELQSAVDILVATPGRLMDHINATRGFTLEHLCYLVVDETDRLLREAYQAWLPTVLQLT 225
++ILV TPGR++ H++ T F +++L LV+DE DR++ +Q + +L+
Sbjct: 171 -------MNILVCTPGRMLQHMDQTAAFDVDNLQMLVLDEADRIMDMGFQTSVDAILE-- 221
Query: 226 RSDNENRFSDASTFLPSAFGSLKTIRRCGVERGFKDKPYPRLVKMVLSATLTQDPNKLAQ 285
LP + M+ SAT T+ + LA+
Sbjct: 222 -------------HLPKQRQT-----------------------MLFSATQTKKVSDLAR 245
Query: 286 LDLHHPLFLTTGE-TRYKLPERLESYKLICESKLKPLYLVALLQSLGEEKCIVFTSSVES 344
L L P ++ E P L+ + + K L +++ + K IVF SS +
Sbjct: 246 LSLKEPEYVAVHEAASSATPTTLQQHYCVVPLPEKLNTLFGFIRANLKAKIIVFMSSGKQ 305
Query: 345 THRLCTLLNHFGELRIKIKEYSGLQRQSVRSKTLKAFREGKIQVLVSSDAMTRGMDVEGV 404
+ L H + I + G Q+Q+ R F K + ++D + RG+D V
Sbjct: 306 VRFVYESLRHL-QPGIPLLHLHGRQKQTARLDITSKFSSSKNSCIFATDVVARGLDFPAV 364
Query: 405 NNVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEKKGAIGR 450
+ V+ D P TYIHR GRTAR G++GR L E++G + R
Sbjct: 365 DWVIQLDCPEDADTYIHRVGRTARYGKVGRAVLFLDPSEEEGMLKR 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,077,750
Number of Sequences: 539616
Number of extensions: 6789627
Number of successful extensions: 23066
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 17701
Number of HSP's gapped (non-prelim): 2741
length of query: 464
length of database: 191,569,459
effective HSP length: 121
effective length of query: 343
effective length of database: 126,275,923
effective search space: 43312641589
effective search space used: 43312641589
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)