BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012437
(463 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UUE0|YNZC_SCHPO UPF0655 protein C17G9.12c OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPBC17G9.12c PE=3 SV=1
Length = 274
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 126/312 (40%), Gaps = 50/312 (16%)
Query: 163 LIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYT 222
++ DFD T T D+ +LAE N+PE W ++S +Y
Sbjct: 1 MLYIVDFDETITTYDTIHLLAEAV---------NKPEE-------------WSVISDKYW 38
Query: 223 EEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG 282
+EY E+ S + ++ L + E+ + R+ +S G++ +
Sbjct: 39 QEYLAWREALPHSTTLTSY-----LPLLGGSRYLEEASIKRIEKSQYFSGLSEGALDNIV 93
Query: 283 ERLSLQDGCTTFFQKVVKNENLNANV-HVLSYCWCGDLIRASF---SSAGLNALNVHANE 338
+ ++L+ G F +V + ++ + HVLS W +I + + + L VHAN+
Sbjct: 94 QLITLRAGFVEFINALVPDLRVSKTIFHVLSVNWSARVIEQTLLHHTDLTADLLCVHAND 153
Query: 339 FSFKESIST--GEIIEKVESPI-----DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLC 391
F F S +T G I+ + S + DKV+ F ++ VYIGDS D C
Sbjct: 154 FDFDTSTNTTNGRILARNASSLLMNSTDKVREFRRIVQTDAVSSPLNVVYIGDSPTDFGC 213
Query: 392 LLEADIGIVIGSSSSLRRVGSQF-GVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTV 450
L + I I++ S+ + S+F V + + V+K I+YT
Sbjct: 214 LQISPISILMRSNQKYYDILSRFEDVQLVDISEFPVQKA-----------VPGKKIIYTC 262
Query: 451 SSWAEVHAFILG 462
S W + L
Sbjct: 263 SDWCAIQKAFLA 274
>sp|P25616|YCQ5_YEAST UPF0655 protein YCR015C OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YCR015C PE=3 SV=2
Length = 317
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 48/261 (18%)
Query: 162 RLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQY 221
+ II SDFD T T VD+ +A++ + P+ L+ WG +K Y
Sbjct: 2 KTIIISDFDETITRVDTICTIAKLPYLLNPR-----------------LKPEWGHFTKTY 44
Query: 222 TEEYEQ----------CIESFMPSEKVE-NFNYETLHKALEQLSH---FEKRANSRVIES 267
+ Y + + S +P+ + NFN + L+ +H E + + + +
Sbjct: 45 MDGYHKYKYNGTRSLPLLSSGVPTIISQSNFN-KLFADELKYQNHNRVVELNSVNEITKQ 103
Query: 268 GVLKGINLEDIK-----KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 322
+ K I+L+ +K + E L+DG TF VVK N ++ +VLS W + I
Sbjct: 104 QIFKSISLDQMKTFARDQNHEDCLLRDGFKTFCSSVVK--NFESDFYVLSINWSKEFIHE 161
Query: 323 SFSSAGLNALNVHANEF---SFKESIS-TGEIIEKVESPIDKVQAFNNTLEKY--GTDRK 376
L ++ N+ S K S S GE ++ + DKV+ L+K G +++
Sbjct: 162 VIGDRRLKNSHIFCNDLKKVSDKCSQSYNGEFDCRLLTGSDKVKILGEILDKIDSGCNKE 221
Query: 377 NLSV---YIGDSVGDLLCLLE 394
S YIGDS DLL +L
Sbjct: 222 GNSCSYWYIGDSETDLLSILH 242
>sp|P44659|Y358_HAEIN Uncharacterized protein HI_0358 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0358 PE=3 SV=1
Length = 215
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 29/144 (20%)
Query: 2 QEWGTDLAKMATV--NSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAM 59
+EWG ++ T ++A + YT +LL G LA + A+
Sbjct: 88 REWGISEQEIFTTQESAACIAYTRYLLDCGMT--------GSLAELY----------AAV 129
Query: 60 SPCMRLYA----FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVS 115
+PC YA ++ + + L N+PY WID Y+SE FQ +A + D L L
Sbjct: 130 TPCALGYAQVARYITQHYPRL-----PNNPYQTWIDTYASEEFQQAAQETVDFLTALCKP 184
Query: 116 LTGEELDIIEKLYHQAMKLEVEFF 139
L +L I++++ A ++E+ F+
Sbjct: 185 LNPSQLAEIQQIFTTATRMEIAFW 208
>sp|Q8FTH8|THIED_COREF Thiamine biosynthesis multifunctional protein ThiED
OS=Corynebacterium efficiens (strain DSM 44549 / YS-314
/ AJ 12310 / JCM 11189 / NBRC 100395) GN=thiED PE=3 SV=1
Length = 739
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 31/127 (24%)
Query: 18 TVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMS--PCMRLYAFLGKEFHA 75
T+ YT+FL+A ++ Y +GA + PC LYA +G
Sbjct: 630 TMAYTDFLIA--------------------RSHADDYVVGAAAVLPCYWLYAEIGL---I 666
Query: 76 LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELD---IIEKLYHQAM 132
L N HPYT W+D YS E F A ++ + ++ ++ G D + + Y A
Sbjct: 667 LAKQNHPEHPYTDWLDTYSGEGFLAGTVKA---IARVEAAMAGAGPDQQRVAAQTYLSAC 723
Query: 133 KLEVEFF 139
E EFF
Sbjct: 724 VHEREFF 730
>sp|Q6GEY1|TENA_STAAR Putative thiaminase-2 OS=Staphylococcus aureus (strain MRSA252)
GN=tenA PE=1 SV=1
Length = 229
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFESLM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q7A0C8|TENA_STAAW Putative thiaminase-2 OS=Staphylococcus aureus (strain MW2) GN=tenA
PE=3 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q6G7L6|TENA_STAAS Putative thiaminase-2 OS=Staphylococcus aureus (strain MSSA476)
GN=tenA PE=3 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q7A4F3|TENA_STAAN Putative thiaminase-2 OS=Staphylococcus aureus (strain N315)
GN=tenA PE=1 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q99SG3|TENA_STAAM Putative thiaminase-2 OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=tenA PE=3 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q5HEA5|TENA_STAAC Putative thiaminase-2 OS=Staphylococcus aureus (strain COL) GN=tenA
PE=3 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q2FF32|TENA_STAA3 Putative thiaminase-2 OS=Staphylococcus aureus (strain USA300)
GN=tenA PE=3 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q08975|THI21_YEAST Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI21
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=THI21 PE=1 SV=1
Length = 551
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 58 AMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLT 117
A++PC+ Y + + A EG+ Y +W + YSS + L+ E LL+ + +
Sbjct: 464 ALNPCLMGYVHALTKIKDEVTAAEGS-VYREWCETYSSSWCHEAMLEGEKLLNHILETYP 522
Query: 118 GEELDIIEKLYHQAMKLEVEFFCA 141
E+LD + +Y + +LE F+ A
Sbjct: 523 PEKLDTLVTIYAEVCELEANFWTA 546
>sp|Q2YUL0|TENA_STAAB Putative thiaminase-2 OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=tenA PE=3 SV=1
Length = 229
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E L+
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEALM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q49Z42|TENA_STAS1 Putative thiaminase-2 OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=tenA
PE=3 SV=1
Length = 229
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHP--YTKWIDNYSSESFQASALQNEDLL 109
AAYT+ AM+PC +Y F+ +E L E N KW + YS+E + ++L+
Sbjct: 127 AAYTIAAMAPCPYVYQFIAQE---ALRDKELNKDSILAKWFEFYSTE-MDELVIVFDNLM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
DKL+ + +E + I++ + Q+ E FF
Sbjct: 183 DKLTKHCSEKEKNEIKQCFLQSTVHERNFF 212
>sp|Q2FWG0|TENA_STAA8 Putative thiaminase-2 OS=Staphylococcus aureus (strain NCTC 8325)
GN=tenA PE=3 SV=1
Length = 229
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQN--EDLL 109
A YT+ AM+PC +YA L K + N KW D YS+E + N E ++
Sbjct: 127 AIYTIAAMAPCPYIYAELAKRSQSDHKLNREKDT-AKWFDFYSTE---MDDIINVFEAIM 182
Query: 110 DKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+KL+ S++ +EL+ +++++ ++ E FF
Sbjct: 183 NKLAESMSDKELEQVKQVFLESCIHERRFF 212
>sp|Q4L7X6|TENA_STAHJ Putative thiaminase-2 OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=tenA PE=3 SV=1
Length = 229
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYT-KWIDNYSSESFQASALQNEDLLD 110
AAYT+ AM+PC +Y + K AL + N T KW D YS+E + ++LLD
Sbjct: 127 AAYTIAAMAPCPYVYEVVAK--MALDDQNLNRDSVTSKWFDFYSTE-MRPLIEVFDNLLD 183
Query: 111 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+L+ + T +E I++ + Q+ E FF
Sbjct: 184 ELTANCTEQEKKDIKESFLQSTIHERNFF 212
>sp|Q08224|THI20_YEAST Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI20
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=THI20 PE=1 SV=1
Length = 551
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 56 LGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVS 115
+ +++PC+ Y + + A EG+ Y +W + Y+S ++ + + E LL+ + +
Sbjct: 462 VASLTPCLMGYGEALTKMKGKVTAPEGSV-YHEWCETYASSWYREAMDEGEKLLNHILET 520
Query: 116 LTGEELDIIEKLYHQAMKLEVEFFCA 141
E+LD + +Y + +LE F+ A
Sbjct: 521 YPPEQLDTLVTIYAEVCELETNFWTA 546
>sp|Q8NQH1|THIED_CORGL Thiamine biosynthesis multifunctional protein ThiED
OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM
20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=theD PE=3
SV=2
Length = 763
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 18 TVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLG--AMSPCMRLYAFLGKEFHA 75
T+ YT+FL+A +T Y G A+ PC LYA +G
Sbjct: 649 TMAYTDFLIA--------------------RTYTEDYVCGVAAVLPCYWLYAEIGL---M 685
Query: 76 LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLE 135
L N HPY W++ YS E F A L+K + E+ + + A E
Sbjct: 686 LAEQNHDEHPYKDWLNTYSGEEFIAGTRAAIARLEKALENAGAEQRVDAARAFLSASVHE 745
Query: 136 VEFF 139
EFF
Sbjct: 746 REFF 749
>sp|Q06490|THI22_YEAST Thiamine biosynthesis protein THI22 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=THI22 PE=2 SV=2
Length = 572
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 58 AMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLT 117
A++PC+ Y + + + A EG+ Y++W D +S + L+ E L++ + +
Sbjct: 485 ALNPCLMGYVYAVDKVKDKITAAEGSI-YSEWCDTCASSFCYQAVLEGERLMNHILETYP 543
Query: 118 GEELDIIEKLYHQAMKLEVEFFCA 141
++LD + ++ + +LE F+ A
Sbjct: 544 PDQLDSLVTIFARGCELETNFWTA 567
>sp|Q8CNK1|TENA_STAES Putative thiaminase-2 OS=Staphylococcus epidermidis (strain ATCC
12228) GN=tenA PE=1 SV=1
Length = 229
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYT-KWIDNYSSESFQASALQNEDLLD 110
AA+T+ AM+PC +YA +GK A+ + T KW YS+E + + ++ L+D
Sbjct: 127 AAFTIAAMAPCPYVYAVIGK--RAMEDPKLNKESVTSKWFQFYSTEMDELVDVFDQ-LMD 183
Query: 111 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+L+ + E I++ + Q+ E FF
Sbjct: 184 RLTKHCSETEKKEIKENFLQSTIHERHFF 212
>sp|Q5HMC7|TENA_STAEQ Putative thiaminase-2 OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=tenA PE=3 SV=1
Length = 229
Score = 35.8 bits (81), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 52 AAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYT-KWIDNYSSESFQASALQNEDLLD 110
AA+T+ AM+PC +YA +GK A+ + T KW YS+E + + ++ L+D
Sbjct: 127 AAFTIAAMAPCPYVYAVIGK--RAMEDPKLNKESVTSKWFQFYSTEMDELVDVFDQ-LMD 183
Query: 111 KLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
+L+ + E I++ + Q+ E FF
Sbjct: 184 RLTKHCSETEKKEIKENFLQSTIHERHFF 212
>sp|P25052|TENA_BACSU Thiaminase-2 OS=Bacillus subtilis (strain 168) GN=tenA PE=1 SV=1
Length = 236
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 56 LGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVS 115
L A+ PC LY +G++ LL+ + G+ Y KWI Y + F+ + + D+L+ +
Sbjct: 129 LAALLPCYWLYYEVGEK---LLHCDPGHPIYQKWIGTYGGDWFRQQVEEQINRFDELAEN 185
Query: 116 LTGE 119
T E
Sbjct: 186 STEE 189
>sp|P44997|SERB_HAEIN Phosphoserine phosphatase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=serB PE=3 SV=1
Length = 314
Score = 35.4 bits (80), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 12/174 (6%)
Query: 227 QCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLS 286
+CI+ V A+ FE+ RV G LKG +++ E L
Sbjct: 118 ECIDEIAKLAGVGELVSAITESAMRGELDFEQSLRCRV---GTLKGAPESILQQVRENLP 174
Query: 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSFKESI 345
L G Q + K + + + D ++A L L+ A N+F ++
Sbjct: 175 LMSGLVETIQTLQKY-GWKTAIASGGFTYFADYLKA------LLQLDFAASNQFDIEDGK 227
Query: 346 STGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399
TG + V K + + LE+YG D ++ S+ IGD DL + A +G+
Sbjct: 228 LTGLVKGDVVDAQYKAKTLQHLLEEYGIDSRH-SIAIGDGANDLAMMNVAGLGV 280
>sp|O94266|THI22_SCHPO Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBP8B7.18c PE=3 SV=1
Length = 551
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 32/55 (58%)
Query: 85 PYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 139
PY KW+DNY E + ++ + ++++ + L+ E + + +++ +A K E F+
Sbjct: 478 PYQKWVDNYFCEDYLSAVRRGCRQIEEIVLKLSPERIQELIEIFIRATKFETLFW 532
>sp|P0A504|CTPE_MYCTU Probable cation-transporting ATPase E OS=Mycobacterium tuberculosis
GN=ctpE PE=3 SV=1
Length = 797
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 359 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQF 414
D+ +A + L+ +G + GD V D+L L +ADIG+ +GS S R +Q
Sbjct: 515 DQKRAIVHALQSHG----HTVAMTGDGVNDVLALKDADIGVAMGSGSPASRAVAQI 566
>sp|P0A505|CTPE_MYCBO Probable cation-transporting ATPase E OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ctpE PE=3 SV=1
Length = 797
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 359 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQF 414
D+ +A + L+ +G + GD V D+L L +ADIG+ +GS S R +Q
Sbjct: 515 DQKRAIVHALQSHG----HTVAMTGDGVNDVLALKDADIGVAMGSGSPASRAVAQI 566
>sp|P48016|ATH1_YEAST Vacuolar acid trehalase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ATH1 PE=1 SV=1
Length = 1211
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 22/185 (11%)
Query: 206 SSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENF------NYETLHKALEQLSHFEKR 259
+ G L N W L + ++ + P NF Y T+ ++ Q ++ +
Sbjct: 176 APGALNNGWPLRNHRFAGAFVSDFYCLQPKLNSTNFPELDDVGYSTVISSIPQWTNLQF- 234
Query: 260 ANSRVIESGVL--KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 317
S V +S + + L+D+ + LS++DG T + + LN+ +HV S W
Sbjct: 235 --SLVNDSKWFNPQNVTLDDVTNYSQNLSMKDGIVT-----TELDWLNSQIHVKSEIWAH 287
Query: 318 DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKN 377
I G+ +L + N + ++ + +D + L GTD KN
Sbjct: 288 RHIHP----LGVVSLEISLNTDHLPSDFDSLDV--NIWDILDFNTSHRTVLHSTGTDEKN 341
Query: 378 LSVYI 382
+V++
Sbjct: 342 NAVFM 346
>sp|Q4DCH3|JBP2_TRYCC Bifunctional helicase and thymine dioxygenase JBP2 OS=Trypanosoma
cruzi (strain CL Brener) GN=JBP2 PE=3 SV=1
Length = 1086
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 268 GVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCW 315
GV +G +L IKK G+ L+ G FF + E+ N VH YCW
Sbjct: 411 GVFEGCHLA-IKKLGKAFRLETGDVLFFDTSL--EHGNTEVHNFDYCW 455
>sp|Q59465|HMCT_HELPY Cadmium, zinc and cobalt-transporting ATPase OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=cadA PE=1 SV=2
Length = 686
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 357 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGV 416
P +K F E+Y K ++++GD + D L AD+GI +G S L + + +
Sbjct: 560 PEEKTSVFKTFKERY----KAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVI 615
Query: 417 T 417
T
Sbjct: 616 T 616
>sp|Q9ZL53|HMCT_HELPJ Cadmium, zinc and cobalt-transporting ATPase OS=Helicobacter pylori
(strain J99) GN=cadA PE=3 SV=1
Length = 686
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 357 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGV 416
P +K F E+Y K ++++GD + D L AD+GI +G S L + + +
Sbjct: 560 PEEKTSVFKTFKERY----KAPAIFVGDGINDAPTLASADVGIGMGKGSELSKQSADIVI 615
Query: 417 T 417
T
Sbjct: 616 T 616
>sp|Q9RQB4|HMCT_HELFE Cadmium, zinc and cobalt-transporting ATPase OS=Helicobacter felis
GN=cadA PE=3 SV=1
Length = 681
Score = 32.3 bits (72), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 357 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGV 416
P DK+ AF + + + S+++GD + D L AD+ + +GS+S + + + +
Sbjct: 555 PEDKLNAFKD----FQAQHAHKSMFVGDGINDAPTLARADVSMSMGSASQISKESADIVI 610
Query: 417 T 417
T
Sbjct: 611 T 611
>sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana
GN=ALA8 PE=3 SV=1
Length = 1189
Score = 32.3 bits (72), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 344 SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 403
+I +I SP K +A L K GT R L+ IGD D+ L EADIG+ I
Sbjct: 829 AIRCNSVICCRSSP--KQKALVTRLVKNGTGRTTLA--IGDGANDVGMLQEADIGVGISG 884
Query: 404 SSSLRRV-GSQFGV 416
+ ++ V S F +
Sbjct: 885 AEGMQAVMASDFAI 898
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,069,732
Number of Sequences: 539616
Number of extensions: 7200454
Number of successful extensions: 20679
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 20653
Number of HSP's gapped (non-prelim): 57
length of query: 463
length of database: 191,569,459
effective HSP length: 121
effective length of query: 342
effective length of database: 126,275,923
effective search space: 43186365666
effective search space used: 43186365666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)