Query 012437
Match_columns 463
No_of_seqs 348 out of 2068
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 02:38:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012437.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012437hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01544 HAD-SF-IE haloacid d 100.0 1.2E-28 2.6E-33 240.8 20.2 228 160-419 20-262 (277)
2 COG0819 TenA Putative transcri 100.0 3.2E-28 6.8E-33 230.3 10.7 124 1-145 90-216 (218)
3 COG4359 Uncharacterized conser 99.9 2.9E-24 6.4E-29 192.7 16.1 196 161-423 2-203 (220)
4 COG0560 SerB Phosphoserine pho 99.9 5.7E-24 1.2E-28 202.3 17.7 199 160-418 3-202 (212)
5 TIGR03333 salvage_mtnX 2-hydro 99.9 3.6E-23 7.9E-28 197.2 18.9 193 164-423 1-200 (214)
6 PRK09552 mtnX 2-hydroxy-3-keto 99.9 1.4E-22 3E-27 193.7 19.1 196 161-423 2-204 (219)
7 PRK14713 multifunctional hydro 99.9 9.7E-24 2.1E-28 226.5 11.3 120 2-146 408-528 (530)
8 PF05822 UMPH-1: Pyrimidine 5' 99.9 5.3E-23 1.1E-27 196.6 11.1 200 206-419 15-230 (246)
9 PRK11133 serB phosphoserine ph 99.9 5.2E-22 1.1E-26 200.0 18.5 192 160-411 108-299 (322)
10 PRK09517 multifunctional thiam 99.9 3.2E-23 7E-28 230.4 10.7 112 12-146 640-752 (755)
11 PF03070 TENA_THI-4: TENA/THI- 99.9 1.9E-23 4E-28 198.1 5.8 123 2-145 84-209 (210)
12 PF06888 Put_Phosphatase: Puta 99.9 8.9E-22 1.9E-26 188.7 16.9 130 271-404 56-198 (234)
13 PTZ00347 phosphomethylpyrimidi 99.9 1.9E-22 4.1E-27 215.6 13.6 137 11-171 105-241 (504)
14 KOG3128 Uncharacterized conser 99.9 1.6E-22 3.5E-27 189.8 9.1 228 160-419 36-279 (298)
15 TIGR01488 HAD-SF-IB Haloacid D 99.8 9E-21 1.9E-25 174.2 13.9 121 268-395 53-177 (177)
16 TIGR00338 serB phosphoserine p 99.8 4.1E-20 8.9E-25 176.1 17.1 137 269-412 68-204 (219)
17 KOG1615 Phosphoserine phosphat 99.8 1.2E-20 2.5E-25 171.2 9.7 181 160-401 14-198 (227)
18 TIGR02137 HSK-PSP phosphoserin 99.8 9.3E-20 2E-24 172.4 15.5 130 271-415 53-183 (203)
19 TIGR01545 YfhB_g-proteo haloac 99.8 2E-19 4.4E-24 171.1 17.5 132 267-409 67-208 (210)
20 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.8 3.4E-19 7.3E-24 167.5 17.2 133 267-406 61-201 (202)
21 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 3.2E-18 6.8E-23 160.3 18.1 133 272-412 66-199 (201)
22 TIGR01489 DKMTPPase-SF 2,3-dik 99.8 5.1E-18 1.1E-22 157.0 17.0 121 271-401 57-185 (188)
23 KOG3120 Predicted haloacid deh 99.8 1.9E-18 4.1E-23 159.8 12.4 188 161-404 12-211 (256)
24 PLN02954 phosphoserine phospha 99.8 1.2E-17 2.6E-22 159.6 16.5 182 159-401 9-194 (224)
25 PRK11590 hypothetical protein; 99.8 3.5E-17 7.6E-22 155.7 17.5 129 270-409 71-209 (211)
26 PRK13582 thrH phosphoserine ph 99.6 4.3E-15 9.4E-20 139.9 16.7 121 271-406 53-174 (205)
27 PF12710 HAD: haloacid dehalog 99.6 2.6E-15 5.6E-20 139.4 10.2 100 286-393 85-192 (192)
28 PLN02177 glycerol-3-phosphate 99.4 1.4E-11 2.9E-16 130.9 17.6 122 268-404 85-216 (497)
29 KOG2598 Phosphomethylpyrimidin 99.3 5.1E-12 1.1E-16 127.2 10.8 119 2-145 400-521 (523)
30 PRK13222 phosphoglycolate phos 99.2 8.5E-10 1.8E-14 105.1 18.9 101 284-401 91-192 (226)
31 PRK08238 hypothetical protein; 99.2 2.2E-10 4.7E-15 121.5 15.6 117 284-423 70-186 (479)
32 TIGR01428 HAD_type_II 2-haloal 99.1 3.3E-09 7.1E-14 99.4 18.6 106 278-402 84-192 (198)
33 PRK10826 2-deoxyglucose-6-phos 99.1 9.7E-10 2.1E-14 105.0 15.1 104 283-403 89-192 (222)
34 TIGR01449 PGP_bact 2-phosphogl 99.1 1.9E-09 4.1E-14 101.9 15.6 100 284-400 83-182 (213)
35 PRK13288 pyrophosphatase PpaX; 99.1 2.5E-09 5.4E-14 101.6 16.1 101 283-400 79-179 (214)
36 PLN03243 haloacid dehalogenase 99.1 2E-09 4.4E-14 105.8 15.6 98 284-400 107-206 (260)
37 PRK13226 phosphoglycolate phos 99.1 6.9E-09 1.5E-13 99.9 17.9 100 284-400 93-192 (229)
38 TIGR03351 PhnX-like phosphonat 99.1 2.3E-09 4.9E-14 102.1 14.2 102 284-399 85-186 (220)
39 TIGR01454 AHBA_synth_RP 3-amin 99.1 4.3E-09 9.3E-14 99.2 15.5 99 283-400 72-172 (205)
40 cd01427 HAD_like Haloacid deha 99.1 1.2E-09 2.5E-14 94.2 10.4 111 282-397 20-134 (139)
41 PRK13225 phosphoglycolate phos 99.0 4.2E-09 9E-14 104.3 15.1 98 282-399 138-235 (273)
42 TIGR01422 phosphonatase phosph 99.0 5.3E-09 1.1E-13 102.0 14.2 100 283-400 96-198 (253)
43 PLN02575 haloacid dehalogenase 99.0 1.1E-08 2.4E-13 105.1 16.5 101 284-401 214-314 (381)
44 PRK14988 GMP/IMP nucleotidase; 99.0 1.5E-08 3.3E-13 97.4 15.9 98 282-398 89-188 (224)
45 PRK13478 phosphonoacetaldehyde 99.0 1.5E-08 3.2E-13 99.9 15.7 98 283-398 98-198 (267)
46 TIGR02253 CTE7 HAD superfamily 99.0 1.4E-08 3.1E-13 96.5 14.9 100 284-402 92-195 (221)
47 TIGR02252 DREG-2 REG-2-like, H 98.9 4.3E-08 9.4E-13 92.1 17.3 95 285-399 104-201 (203)
48 PRK13223 phosphoglycolate phos 98.9 3.2E-08 7E-13 97.9 16.6 98 284-398 99-196 (272)
49 PRK09449 dUMP phosphatase; Pro 98.9 3.2E-08 6.8E-13 94.5 16.0 101 284-401 93-195 (224)
50 PLN02770 haloacid dehalogenase 98.9 9.4E-09 2E-13 100.2 12.5 98 284-400 106-205 (248)
51 TIGR02009 PGMB-YQAB-SF beta-ph 98.9 2.2E-08 4.7E-13 92.4 13.8 96 284-400 86-183 (185)
52 COG0546 Gph Predicted phosphat 98.9 3.8E-08 8.2E-13 94.2 15.5 94 285-397 88-183 (220)
53 PRK11587 putative phosphatase; 98.9 2.1E-08 4.5E-13 95.7 13.5 101 283-402 80-182 (218)
54 TIGR01990 bPGM beta-phosphoglu 98.9 3.1E-08 6.6E-13 91.4 12.9 97 284-399 85-181 (185)
55 PRK09456 ?-D-glucose-1-phospha 98.9 4.9E-08 1.1E-12 91.8 14.3 111 285-412 83-195 (199)
56 TIGR01549 HAD-SF-IA-v1 haloaci 98.9 1.7E-08 3.6E-13 90.6 10.2 93 284-396 62-154 (154)
57 PLN02940 riboflavin kinase 98.8 4.5E-08 9.8E-13 101.5 14.0 100 283-401 90-192 (382)
58 PF13419 HAD_2: Haloacid dehal 98.8 1.4E-07 3E-12 85.1 15.3 98 283-399 74-173 (176)
59 PLN02779 haloacid dehalogenase 98.7 8.8E-07 1.9E-11 88.3 19.5 102 285-401 143-244 (286)
60 TIGR02254 YjjG/YfnB HAD superf 98.7 5.4E-07 1.2E-11 85.6 16.0 98 284-401 95-197 (224)
61 TIGR01993 Pyr-5-nucltdase pyri 98.7 6E-07 1.3E-11 83.1 15.5 99 284-400 82-182 (184)
62 TIGR01548 HAD-SF-IA-hyp1 haloa 98.7 8.6E-07 1.9E-11 83.1 15.9 92 286-395 106-197 (197)
63 PRK06698 bifunctional 5'-methy 98.7 6.8E-07 1.5E-11 95.0 17.0 97 284-400 328-424 (459)
64 TIGR01509 HAD-SF-IA-v3 haloaci 98.7 6.1E-07 1.3E-11 82.3 14.4 95 285-399 84-180 (183)
65 PRK10563 6-phosphogluconate ph 98.7 7.9E-07 1.7E-11 84.7 15.5 99 284-401 86-184 (221)
66 PHA02597 30.2 hypothetical pro 98.6 5.1E-07 1.1E-11 84.6 13.8 100 283-401 71-172 (197)
67 PRK10725 fructose-1-P/6-phosph 98.6 4.1E-07 8.8E-12 84.3 13.0 96 284-400 86-183 (188)
68 TIGR01672 AphA HAD superfamily 98.6 4.9E-07 1.1E-11 87.5 13.0 92 284-398 112-206 (237)
69 TIGR02247 HAD-1A3-hyp Epoxide 98.6 6.7E-07 1.4E-11 84.6 13.5 107 284-408 92-202 (211)
70 TIGR01497 kdpB K+-transporting 98.6 3E-07 6.4E-12 101.1 11.3 108 286-425 446-553 (675)
71 TIGR01511 ATPase-IB1_Cu copper 98.5 5.1E-07 1.1E-11 98.2 11.5 94 285-407 404-497 (562)
72 PLN02919 haloacid dehalogenase 98.5 2E-06 4.3E-11 99.8 16.9 99 286-400 161-259 (1057)
73 PRK01122 potassium-transportin 98.5 5.6E-07 1.2E-11 99.1 11.7 94 286-407 445-538 (679)
74 PRK14010 potassium-transportin 98.5 7.3E-07 1.6E-11 98.1 11.5 108 286-425 441-548 (673)
75 PF00702 Hydrolase: haloacid d 98.4 5.5E-07 1.2E-11 84.6 8.1 88 285-396 126-215 (215)
76 PRK10748 flavin mononucleotide 98.4 1.4E-05 3E-10 77.4 18.1 93 283-400 110-205 (238)
77 PLN02811 hydrolase 98.4 2.8E-06 6E-11 81.2 12.5 103 283-401 75-182 (220)
78 PRK11009 aphA acid phosphatase 98.4 2.2E-06 4.7E-11 83.0 11.6 91 284-397 112-205 (237)
79 COG2217 ZntA Cation transport 98.4 1E-06 2.2E-11 97.2 10.5 92 286-405 537-628 (713)
80 COG0637 Predicted phosphatase/ 98.4 2.3E-06 5E-11 82.1 10.7 104 281-401 81-184 (221)
81 PLN02499 glycerol-3-phosphate 98.4 1.1E-05 2.4E-10 84.9 16.1 114 267-396 70-192 (498)
82 TIGR01524 ATPase-IIIB_Mg magne 98.3 2.5E-06 5.5E-11 97.2 11.6 110 286-405 515-631 (867)
83 TIGR01512 ATPase-IB2_Cd heavy 98.3 1.9E-06 4.1E-11 93.3 10.1 90 285-402 361-451 (536)
84 COG4030 Uncharacterized protei 98.3 1.7E-05 3.7E-10 74.7 13.9 127 271-404 67-238 (315)
85 PRK10517 magnesium-transportin 98.3 3.5E-06 7.7E-11 96.3 11.4 111 285-405 549-666 (902)
86 PRK15122 magnesium-transportin 98.3 3.1E-06 6.8E-11 96.8 11.0 111 286-406 550-667 (903)
87 TIGR01670 YrbI-phosphatas 3-de 98.3 6.5E-06 1.4E-10 74.4 10.4 85 294-404 36-120 (154)
88 PRK11033 zntA zinc/cadmium/mer 98.2 4.5E-06 9.7E-11 93.7 10.6 92 285-406 567-658 (741)
89 TIGR01647 ATPase-IIIA_H plasma 98.2 4.2E-06 9.2E-11 94.1 10.1 109 286-405 442-563 (755)
90 TIGR01525 ATPase-IB_hvy heavy 98.2 8.2E-06 1.8E-10 88.8 11.2 97 285-408 383-479 (556)
91 TIGR01517 ATPase-IIB_Ca plasma 98.2 7.8E-06 1.7E-10 94.2 11.4 107 286-402 579-694 (941)
92 TIGR02726 phenyl_P_delta pheny 98.2 8.7E-06 1.9E-10 74.9 9.2 91 295-411 43-134 (169)
93 TIGR00213 GmhB_yaeD D,D-heptos 98.2 1.4E-05 3.1E-10 73.7 10.6 109 284-399 24-146 (176)
94 TIGR01523 ATPase-IID_K-Na pota 98.1 8.6E-06 1.9E-10 94.5 10.7 108 286-402 646-771 (1053)
95 TIGR01656 Histidinol-ppas hist 98.1 1.2E-05 2.6E-10 72.0 9.4 104 285-401 26-144 (147)
96 PRK10671 copA copper exporting 98.1 1.1E-05 2.3E-10 92.0 11.2 92 286-405 650-741 (834)
97 TIGR01493 HAD-SF-IA-v2 Haloaci 98.1 1.8E-05 3.9E-10 72.4 10.3 88 282-395 86-175 (175)
98 TIGR01522 ATPase-IIA2_Ca golgi 98.1 1.2E-05 2.6E-10 92.0 10.8 108 286-403 528-644 (884)
99 TIGR01261 hisB_Nterm histidino 98.1 2E-05 4.2E-10 72.0 9.9 105 284-402 27-147 (161)
100 TIGR01662 HAD-SF-IIIA HAD-supe 98.1 2.7E-05 5.9E-10 68.0 10.3 97 285-401 24-130 (132)
101 PRK09484 3-deoxy-D-manno-octul 98.1 1.6E-05 3.4E-10 74.1 9.2 85 295-405 57-141 (183)
102 TIGR01533 lipo_e_P4 5'-nucleot 98.1 0.00011 2.4E-09 72.4 14.8 115 284-423 116-234 (266)
103 COG4087 Soluble P-type ATPase 98.0 1.8E-05 3.9E-10 68.4 7.8 89 286-401 30-118 (152)
104 KOG0207 Cation transport ATPas 98.0 2.1E-05 4.5E-10 86.8 10.3 92 286-405 723-814 (951)
105 PRK05446 imidazole glycerol-ph 98.0 3.8E-05 8.3E-10 78.6 11.3 103 284-401 28-147 (354)
106 TIGR01116 ATPase-IIA1_Ca sarco 98.0 3.3E-05 7.1E-10 88.8 11.4 109 286-405 537-659 (917)
107 COG1011 Predicted hydrolase (H 98.0 0.00031 6.7E-09 66.8 16.4 103 284-404 97-201 (229)
108 PRK08942 D,D-heptose 1,7-bisph 98.0 4.4E-05 9.6E-10 70.7 9.4 104 285-401 28-145 (181)
109 smart00775 LNS2 LNS2 domain. T 97.9 0.00014 3E-09 66.2 10.8 104 287-397 28-140 (157)
110 KOG0202 Ca2+ transporting ATPa 97.9 6.4E-05 1.4E-09 82.3 10.0 103 286-402 584-703 (972)
111 PRK10530 pyridoxal phosphate ( 97.8 7.2E-05 1.6E-09 73.3 9.1 54 356-410 196-250 (272)
112 PRK06769 hypothetical protein; 97.8 0.00011 2.3E-09 67.8 8.8 101 285-401 27-136 (173)
113 TIGR01106 ATPase-IIC_X-K sodiu 97.8 7.3E-05 1.6E-09 86.7 8.9 109 286-403 568-710 (997)
114 COG0474 MgtA Cation transport 97.7 8.2E-05 1.8E-09 85.4 8.6 108 286-404 547-666 (917)
115 PRK10513 sugar phosphate phosp 97.7 4.1E-05 8.8E-10 75.2 5.3 56 355-411 192-248 (270)
116 TIGR01685 MDP-1 magnesium-depe 97.7 0.00022 4.7E-09 65.9 9.6 112 282-403 41-157 (174)
117 PRK10976 putative hydrolase; P 97.7 4.7E-05 1E-09 74.6 5.1 57 355-412 186-243 (266)
118 PRK12702 mannosyl-3-phosphogly 97.7 0.00042 9.1E-09 68.7 11.4 96 307-404 150-254 (302)
119 TIGR01494 ATPase_P-type ATPase 97.7 0.00016 3.4E-09 77.8 9.1 87 285-402 346-432 (499)
120 TIGR01657 P-ATPase-V P-type AT 97.6 0.0002 4.3E-09 83.6 10.4 111 285-404 655-829 (1054)
121 TIGR01664 DNA-3'-Pase DNA 3'-p 97.6 0.0003 6.5E-09 64.5 9.4 93 287-398 43-157 (166)
122 TIGR01691 enolase-ppase 2,3-di 97.6 0.0003 6.4E-09 67.5 9.7 100 284-400 93-193 (220)
123 PRK15126 thiamin pyrimidine py 97.6 7E-05 1.5E-09 73.8 5.6 78 355-435 184-264 (272)
124 smart00577 CPDc catalytic doma 97.6 9.3E-05 2E-09 66.4 5.6 94 284-397 43-136 (148)
125 PF08282 Hydrolase_3: haloacid 97.6 0.00013 2.8E-09 69.7 6.4 57 355-412 182-239 (254)
126 COG0561 Cof Predicted hydrolas 97.6 0.00014 3E-09 71.3 6.4 57 355-412 185-242 (264)
127 TIGR01668 YqeG_hyp_ppase HAD s 97.5 0.0006 1.3E-08 62.6 9.8 94 284-402 41-136 (170)
128 KOG3085 Predicted hydrolase (H 97.5 0.003 6.5E-08 61.0 14.7 101 284-404 111-215 (237)
129 PF08235 LNS2: LNS2 (Lipin/Ned 97.5 0.0005 1.1E-08 62.2 8.8 108 286-398 27-141 (157)
130 TIGR01482 SPP-subfamily Sucros 97.5 0.00012 2.6E-09 69.7 5.0 55 356-411 146-201 (225)
131 TIGR01487 SPP-like sucrose-pho 97.5 0.00012 2.7E-09 69.4 4.9 55 356-411 144-199 (215)
132 PRK01158 phosphoglycolate phos 97.4 0.00017 3.6E-09 69.0 5.2 55 356-411 154-209 (230)
133 PRK03669 mannosyl-3-phosphogly 97.4 0.00021 4.5E-09 70.6 5.0 48 355-403 183-233 (271)
134 COG2216 KdpB High-affinity K+ 97.4 0.0005 1.1E-08 71.9 7.7 110 286-427 447-556 (681)
135 TIGR01681 HAD-SF-IIIC HAD-supe 97.4 0.00069 1.5E-08 59.3 7.6 94 286-394 29-126 (128)
136 PLN02887 hydrolase family prot 97.4 0.00022 4.7E-09 77.7 5.3 56 355-411 503-559 (580)
137 TIGR02471 sucr_syn_bact_C sucr 97.3 0.00034 7.4E-09 67.4 5.2 58 355-413 155-213 (236)
138 PHA02530 pseT polynucleotide k 97.3 0.00087 1.9E-08 66.9 8.1 110 284-401 185-294 (300)
139 TIGR01486 HAD-SF-IIB-MPGP mann 97.2 0.00033 7.2E-09 68.4 4.9 49 356-404 173-222 (256)
140 COG1778 Low specificity phosph 97.2 0.0012 2.6E-08 59.1 7.3 91 295-411 44-135 (170)
141 TIGR01652 ATPase-Plipid phosph 97.2 0.0015 3.2E-08 76.5 10.2 111 286-404 631-796 (1057)
142 TIGR02463 MPGP_rel mannosyl-3- 97.2 0.00051 1.1E-08 65.4 5.2 45 356-401 176-220 (221)
143 PLN03190 aminophospholipid tra 97.1 0.0023 4.9E-08 75.3 10.7 46 355-404 854-899 (1178)
144 TIGR00099 Cof-subfamily Cof su 97.1 0.0007 1.5E-08 66.0 5.0 56 355-411 184-240 (256)
145 COG0241 HisB Histidinol phosph 96.9 0.0083 1.8E-07 55.6 10.4 105 284-401 29-148 (181)
146 PRK00192 mannosyl-3-phosphogly 96.9 0.0014 2.9E-08 64.8 5.4 51 356-408 188-240 (273)
147 PLN02382 probable sucrose-phos 96.9 0.0016 3.5E-08 68.3 6.0 57 355-412 171-232 (413)
148 PF06941 NT5C: 5' nucleotidase 96.8 0.012 2.5E-07 55.0 10.9 30 282-314 69-98 (191)
149 TIGR02461 osmo_MPG_phos mannos 96.8 0.0016 3.4E-08 62.7 4.8 46 357-402 179-225 (225)
150 TIGR01485 SPP_plant-cyano sucr 96.7 0.0038 8.1E-08 60.8 7.2 56 356-412 164-221 (249)
151 TIGR01686 FkbH FkbH-like domai 96.7 0.0074 1.6E-07 61.1 9.1 103 287-411 32-139 (320)
152 PF05116 S6PP: Sucrose-6F-phos 96.6 0.0049 1.1E-07 60.2 7.1 48 356-404 162-209 (247)
153 KOG0204 Calcium transporting A 96.5 0.0055 1.2E-07 67.7 7.1 124 286-423 647-782 (1034)
154 TIGR01484 HAD-SF-IIB HAD-super 96.4 0.0028 6E-08 59.4 3.9 45 356-401 160-204 (204)
155 TIGR01684 viral_ppase viral ph 96.4 0.011 2.5E-07 58.6 7.7 43 285-331 144-187 (301)
156 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.2 0.041 8.9E-07 53.3 10.8 89 284-396 22-115 (242)
157 PF11019 DUF2608: Protein of u 96.1 0.12 2.5E-06 50.8 13.5 113 278-395 73-197 (252)
158 KOG2914 Predicted haloacid-hal 96.1 0.11 2.4E-06 49.8 12.9 110 281-404 87-197 (222)
159 PRK14502 bifunctional mannosyl 96.1 0.0073 1.6E-07 66.3 5.3 48 356-404 610-659 (694)
160 PRK10187 trehalose-6-phosphate 96.0 0.0068 1.5E-07 59.8 4.3 49 356-405 171-223 (266)
161 TIGR01663 PNK-3'Pase polynucle 95.9 0.055 1.2E-06 58.4 10.8 116 287-423 198-330 (526)
162 PF03767 Acid_phosphat_B: HAD 95.9 0.068 1.5E-06 51.6 10.4 92 286-392 115-208 (229)
163 TIGR01675 plant-AP plant acid 95.9 0.14 3.1E-06 49.3 12.5 89 284-391 118-211 (229)
164 TIGR02251 HIF-SF_euk Dullard-l 95.6 0.01 2.2E-07 54.2 3.1 92 284-397 40-133 (162)
165 COG2503 Predicted secreted aci 95.4 0.22 4.8E-06 48.0 11.5 125 273-422 107-237 (274)
166 PTZ00174 phosphomannomutase; P 95.3 0.017 3.7E-07 56.2 4.0 54 355-413 184-243 (247)
167 KOG0210 P-type ATPase [Inorgan 94.8 0.038 8.3E-07 60.1 5.1 111 285-416 710-822 (1051)
168 PLN02423 phosphomannomutase 94.8 0.046 1E-06 53.2 5.3 53 355-413 185-242 (245)
169 PF12689 Acid_PPase: Acid Phos 94.6 0.34 7.3E-06 44.6 10.2 111 280-404 39-152 (169)
170 PF13242 Hydrolase_like: HAD-h 93.5 0.19 4.1E-06 39.4 5.4 41 362-403 8-50 (75)
171 TIGR00685 T6PP trehalose-phosp 93.4 0.1 2.2E-06 50.6 4.7 39 356-395 164-202 (244)
172 KOG0203 Na+/K+ ATPase, alpha s 93.3 0.17 3.7E-06 56.4 6.5 109 286-403 590-732 (1019)
173 TIGR02244 HAD-IG-Ncltidse HAD 92.9 0.73 1.6E-05 47.2 10.0 111 284-403 182-324 (343)
174 TIGR01680 Veg_Stor_Prot vegeta 92.8 1.6 3.5E-05 43.2 11.8 91 284-390 143-236 (275)
175 KOG3109 Haloacid dehalogenase- 92.7 8.1 0.00018 37.0 15.9 114 274-403 82-206 (244)
176 PLN02580 trehalose-phosphatase 92.5 0.18 3.8E-06 52.4 5.1 47 357-403 299-352 (384)
177 KOG0206 P-type ATPase [General 92.4 0.093 2E-06 61.0 3.1 46 356-405 778-823 (1151)
178 COG3700 AphA Acid phosphatase 92.4 0.6 1.3E-05 43.0 7.6 88 291-401 119-210 (237)
179 COG4996 Predicted phosphatase 92.0 0.45 9.7E-06 41.7 6.1 44 282-329 37-80 (164)
180 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.0 0.15 3.2E-06 49.4 3.6 40 361-400 198-238 (242)
181 COG2179 Predicted hydrolase of 90.8 1.7 3.6E-05 39.8 8.8 90 285-400 45-135 (175)
182 PRK14501 putative bifunctional 90.5 0.25 5.3E-06 55.8 4.0 47 356-405 654-703 (726)
183 PHA03398 viral phosphatase sup 90.3 0.67 1.4E-05 46.3 6.3 44 284-331 145-189 (303)
184 PF08645 PNK3P: Polynucleotide 89.7 1.1 2.5E-05 40.6 7.0 85 287-388 30-130 (159)
185 PLN02645 phosphoglycolate phos 88.7 2.6 5.5E-05 42.5 9.4 87 286-397 44-132 (311)
186 KOG0208 Cation transport ATPas 88.0 0.43 9.2E-06 54.2 3.4 44 356-404 837-880 (1140)
187 PTZ00445 p36-lilke protein; Pr 87.5 3.5 7.6E-05 39.3 8.7 109 286-403 75-206 (219)
188 KOG0209 P-type ATPase [Inorgan 87.5 0.53 1.2E-05 52.5 3.7 41 359-404 794-834 (1160)
189 TIGR01458 HAD-SF-IIA-hyp3 HAD- 85.3 0.56 1.2E-05 45.9 2.3 41 360-401 181-223 (257)
190 COG3769 Predicted hydrolase (H 84.8 0.8 1.7E-05 43.7 3.0 44 360-403 192-236 (274)
191 TIGR01452 PGP_euk phosphoglyco 84.0 0.63 1.4E-05 46.0 2.1 39 362-401 206-246 (279)
192 PLN02205 alpha,alpha-trehalose 82.4 1.3 2.9E-05 50.8 4.1 40 356-396 759-801 (854)
193 TIGR02245 HAD_IIID1 HAD-superf 80.1 9.2 0.0002 36.0 8.2 40 285-329 44-83 (195)
194 KOG0205 Plasma membrane H+-tra 79.5 1.4 3E-05 48.2 2.7 109 286-404 492-612 (942)
195 PF09949 DUF2183: Uncharacteri 77.3 8.9 0.00019 32.1 6.4 76 307-390 1-79 (100)
196 PF03031 NIF: NLI interacting 77.2 2.7 5.8E-05 37.6 3.6 40 284-328 34-73 (159)
197 PRK10444 UMP phosphatase; Prov 77.0 4.1 8.9E-05 39.7 5.1 44 357-401 173-218 (248)
198 PLN03017 trehalose-phosphatase 75.8 3.4 7.4E-05 42.7 4.3 46 357-402 281-333 (366)
199 PF13344 Hydrolase_6: Haloacid 75.4 6.7 0.00015 32.6 5.3 43 285-330 13-57 (101)
200 PLN02588 glycerol-3-phosphate 74.9 24 0.00053 38.0 10.4 124 267-403 108-239 (525)
201 TIGR02250 FCP1_euk FCP1-like p 73.8 4.3 9.4E-05 36.7 4.0 42 283-329 55-96 (156)
202 KOG2116 Protein involved in pl 73.3 1.8 3.8E-05 47.3 1.5 49 360-408 634-686 (738)
203 PLN02645 phosphoglycolate phos 72.7 5.1 0.00011 40.4 4.6 41 360-401 232-274 (311)
204 TIGR01460 HAD-SF-IIA Haloacid 72.5 5.7 0.00012 38.2 4.8 41 359-400 189-231 (236)
205 PF09419 PGP_phosphatase: Mito 72.0 39 0.00085 31.0 9.8 98 286-402 59-164 (168)
206 TIGR01457 HAD-SF-IIA-hyp2 HAD- 70.4 7.7 0.00017 37.7 5.2 41 360-401 180-222 (249)
207 PLN02151 trehalose-phosphatase 68.8 5.7 0.00012 40.9 4.0 46 357-402 267-319 (354)
208 TIGR00685 T6PP trehalose-phosp 68.7 2.3 5E-05 41.1 1.1 15 161-175 2-16 (244)
209 COG5083 SMP2 Uncharacterized p 68.0 3.7 8E-05 42.9 2.4 28 159-186 371-399 (580)
210 COG4229 Predicted enolase-phos 66.6 30 0.00066 32.3 7.7 98 284-399 101-200 (229)
211 PRK10187 trehalose-6-phosphate 65.7 4.1 8.9E-05 40.1 2.2 16 160-175 12-27 (266)
212 CHL00168 pbsA heme oxygenase; 65.5 1E+02 0.0022 30.0 11.7 103 11-140 95-205 (238)
213 KOG4175 Tryptophan synthase al 65.1 70 0.0015 30.3 9.9 132 289-423 3-156 (268)
214 TIGR01485 SPP_plant-cyano sucr 63.7 3.5 7.7E-05 39.8 1.3 14 162-175 1-14 (249)
215 PLN02580 trehalose-phosphatase 61.2 4 8.6E-05 42.5 1.2 16 160-175 117-132 (384)
216 PRK09484 3-deoxy-D-manno-octul 61.1 4.3 9.3E-05 37.5 1.3 17 160-176 19-35 (183)
217 PLN02423 phosphomannomutase 60.4 4.5 9.8E-05 39.3 1.4 18 160-177 5-22 (245)
218 PRK05690 molybdopterin biosynt 59.5 1.7E+02 0.0038 28.3 12.4 138 273-420 5-152 (245)
219 PF05116 S6PP: Sucrose-6F-phos 59.1 4.5 9.7E-05 39.4 1.1 15 161-175 1-15 (247)
220 TIGR01452 PGP_euk phosphoglyco 58.6 35 0.00076 33.6 7.4 41 286-329 18-60 (279)
221 PLN02151 trehalose-phosphatase 58.1 5.1 0.00011 41.2 1.4 16 160-175 96-111 (354)
222 PRK07878 molybdopterin biosynt 57.8 1.6E+02 0.0035 30.7 12.5 138 273-420 15-162 (392)
223 PRK08762 molybdopterin biosynt 57.5 1.6E+02 0.0034 30.4 12.4 112 306-421 136-256 (376)
224 COG1877 OtsB Trehalose-6-phosp 57.1 5.5 0.00012 39.4 1.3 16 159-174 15-30 (266)
225 PRK14501 putative bifunctional 56.9 19 0.0004 40.8 5.7 17 160-176 490-506 (726)
226 PLN03017 trehalose-phosphatase 56.6 5.7 0.00012 41.1 1.4 15 160-174 109-123 (366)
227 KOG4549 Magnesium-dependent ph 54.8 46 0.001 29.2 6.4 45 282-329 40-84 (144)
228 PF02358 Trehalose_PPase: Treh 54.0 12 0.00025 35.9 3.1 48 357-404 163-218 (235)
229 TIGR02468 sucrsPsyn_pln sucros 53.2 34 0.00074 40.3 7.0 76 318-403 924-1002(1050)
230 TIGR01689 EcbF-BcbF capsule bi 52.4 43 0.00093 29.2 6.0 50 286-338 24-87 (126)
231 COG1458 Predicted DNA-binding 51.7 12 0.00026 35.0 2.5 42 382-423 158-201 (221)
232 PF00899 ThiF: ThiF family; I 51.5 1.6E+02 0.0034 25.3 10.6 112 306-421 3-123 (135)
233 TIGR01487 SPP-like sucrose-pho 51.2 35 0.00076 31.9 5.8 50 287-340 19-68 (215)
234 COG0647 NagD Predicted sugar p 50.9 75 0.0016 31.5 8.2 89 284-398 22-112 (269)
235 cd00232 HemeO Heme oxygenase c 49.8 2.1E+02 0.0046 26.4 11.3 100 3-127 83-187 (203)
236 PF00702 Hydrolase: haloacid d 49.3 7.1 0.00015 36.0 0.7 15 164-178 3-17 (215)
237 TIGR02471 sucr_syn_bact_C sucr 49.2 6.3 0.00014 37.7 0.3 14 164-177 1-14 (236)
238 PRK00192 mannosyl-3-phosphogly 49.1 44 0.00095 32.7 6.4 48 288-339 23-70 (273)
239 TIGR01689 EcbF-BcbF capsule bi 47.8 9 0.00019 33.5 1.1 13 164-176 3-15 (126)
240 PF05761 5_nucleotid: 5' nucle 47.0 13 0.00028 39.6 2.2 38 285-326 182-219 (448)
241 COG2099 CobK Precorrin-6x redu 46.6 48 0.001 32.5 5.9 52 395-460 73-124 (257)
242 PLN02382 probable sucrose-phos 46.5 12 0.00026 39.4 1.9 16 161-176 8-23 (413)
243 TIGR02461 osmo_MPG_phos mannos 46.4 47 0.001 31.7 5.9 47 290-340 19-65 (225)
244 TIGR00099 Cof-subfamily Cof su 45.8 52 0.0011 31.6 6.2 49 287-339 17-65 (256)
245 PRK05600 thiamine biosynthesis 44.5 3.1E+02 0.0068 28.4 12.0 138 272-419 13-160 (370)
246 TIGR02463 MPGP_rel mannosyl-3- 43.7 64 0.0014 30.1 6.4 36 291-330 21-56 (221)
247 TIGR02726 phenyl_P_delta pheny 43.2 14 0.00029 33.9 1.5 17 160-176 5-21 (169)
248 cd01483 E1_enzyme_family Super 43.1 1.9E+02 0.0042 25.0 8.9 62 356-421 50-120 (143)
249 TIGR01681 HAD-SF-IIIC HAD-supe 43.0 11 0.00024 32.6 0.9 14 164-177 2-15 (128)
250 PTZ00174 phosphomannomutase; P 41.7 13 0.00029 35.9 1.3 16 162-177 5-20 (247)
251 PLN03063 alpha,alpha-trehalose 41.6 25 0.00053 40.4 3.6 42 355-396 674-721 (797)
252 PF08645 PNK3P: Polynucleotide 41.3 13 0.00028 33.7 1.0 14 164-177 2-15 (159)
253 COG4850 Uncharacterized conser 40.7 97 0.0021 31.6 7.1 98 284-394 194-296 (373)
254 PRK15116 sulfur acceptor prote 40.1 3.1E+02 0.0067 27.1 10.6 117 293-419 23-150 (268)
255 TIGR01458 HAD-SF-IIA-hyp3 HAD- 39.7 52 0.0011 32.1 5.1 41 287-330 22-64 (257)
256 TIGR01658 EYA-cons_domain eyes 38.9 1.1E+02 0.0024 29.9 7.0 46 358-423 213-258 (274)
257 PRK01158 phosphoglycolate phos 38.8 79 0.0017 29.6 6.2 47 288-338 22-68 (230)
258 PF08745 UPF0278: UPF0278 fami 38.8 17 0.00037 34.2 1.5 41 382-422 151-193 (205)
259 PRK10444 UMP phosphatase; Prov 38.7 59 0.0013 31.6 5.3 41 286-329 17-59 (248)
260 TIGR01457 HAD-SF-IIA-hyp2 HAD- 38.5 57 0.0012 31.5 5.2 40 288-330 19-60 (249)
261 PRK15126 thiamin pyrimidine py 38.5 78 0.0017 30.7 6.2 48 288-339 21-68 (272)
262 TIGR01662 HAD-SF-IIIA HAD-supe 38.3 16 0.00034 31.3 1.2 12 164-175 2-13 (132)
263 TIGR01656 Histidinol-ppas hist 38.3 16 0.00035 32.2 1.2 14 164-177 2-15 (147)
264 TIGR01486 HAD-SF-IIB-MPGP mann 38.3 81 0.0018 30.4 6.3 45 291-339 21-65 (256)
265 cd01410 SIRT7 SIRT7: Eukaryoti 38.2 3.1E+02 0.0067 25.8 10.0 47 376-422 131-189 (206)
266 PF08282 Hydrolase_3: haloacid 37.7 75 0.0016 29.5 5.8 51 287-341 16-66 (254)
267 PRK07411 hypothetical protein; 37.2 5E+02 0.011 27.0 12.9 137 273-419 11-157 (390)
268 TIGR01664 DNA-3'-Pase DNA 3'-p 37.1 25 0.00054 32.0 2.3 22 156-177 7-28 (166)
269 PHA03398 viral phosphatase sup 37.0 16 0.00035 36.7 1.0 19 159-177 125-143 (303)
270 PRK05597 molybdopterin biosynt 36.5 4.9E+02 0.011 26.7 12.3 109 306-419 29-147 (355)
271 TIGR03875 RNA_lig_partner RNA 35.8 33 0.00071 32.4 2.8 39 382-420 154-194 (206)
272 TIGR01670 YrbI-phosphatas 3-de 35.4 19 0.00041 32.1 1.2 14 163-176 2-15 (154)
273 TIGR01456 CECR5 HAD-superfamil 35.2 31 0.00067 34.9 2.8 26 377-402 264-291 (321)
274 PRK10530 pyridoxal phosphate ( 34.6 95 0.0021 29.8 6.1 46 291-340 25-70 (272)
275 PLN02205 alpha,alpha-trehalose 34.2 33 0.0007 39.7 3.1 16 161-176 595-610 (854)
276 PRK10976 putative hydrolase; P 33.5 1E+02 0.0022 29.7 6.1 46 290-339 23-68 (266)
277 PRK04358 hypothetical protein; 32.4 36 0.00078 32.5 2.5 40 382-421 158-199 (217)
278 PRK03669 mannosyl-3-phosphogly 32.4 1.1E+02 0.0024 29.8 6.2 45 291-339 29-74 (271)
279 PF03332 PMM: Eukaryotic phosp 32.4 32 0.0007 33.0 2.2 53 356-412 159-216 (220)
280 PF02609 Exonuc_VII_S: Exonucl 32.4 1.2E+02 0.0027 21.9 4.9 35 98-134 1-35 (53)
281 COG0561 Cof Predicted hydrolas 32.0 4E+02 0.0086 25.5 10.0 47 287-337 21-67 (264)
282 COG0159 TrpA Tryptophan syntha 31.6 5.2E+02 0.011 25.6 11.8 35 389-423 115-155 (265)
283 TIGR01482 SPP-subfamily Sucros 31.4 1.2E+02 0.0027 28.1 6.2 48 287-338 16-63 (225)
284 PF06014 DUF910: Bacterial pro 31.4 23 0.0005 26.9 0.9 26 364-394 7-32 (62)
285 PRK13689 hypothetical protein; 30.7 1.6E+02 0.0035 23.2 5.4 44 91-134 5-67 (75)
286 TIGR02355 moeB molybdopterin s 30.5 4.1E+02 0.009 25.6 9.7 111 306-420 25-144 (240)
287 PLN03064 alpha,alpha-trehalose 30.0 26 0.00056 40.8 1.4 40 355-394 764-809 (934)
288 PF15565 Imm16: Immunity prote 28.3 80 0.0017 26.7 3.7 39 100-138 13-51 (106)
289 PF00290 Trp_syntA: Tryptophan 27.9 1.2E+02 0.0026 29.9 5.5 56 390-452 109-172 (259)
290 COG1778 Low specificity phosph 27.9 31 0.00066 31.4 1.2 15 162-176 8-22 (170)
291 COG5424 Pyrroloquinoline quino 27.8 4.5E+02 0.0098 25.6 9.1 113 3-142 103-225 (242)
292 PRK12702 mannosyl-3-phosphogly 27.8 1.6E+02 0.0034 29.8 6.3 44 291-338 23-66 (302)
293 PRK15174 Vi polysaccharide exp 27.8 3.2E+02 0.007 30.5 9.5 116 291-423 467-592 (656)
294 PF02571 CbiJ: Precorrin-6x re 27.4 1.5E+02 0.0033 28.9 6.1 43 404-460 82-125 (249)
295 cd00755 YgdL_like Family of ac 26.5 5.8E+02 0.013 24.5 10.8 118 293-420 4-132 (231)
296 PRK06153 hypothetical protein; 26.5 5.8E+02 0.013 26.8 10.4 131 282-421 158-297 (393)
297 COG0794 GutQ Predicted sugar p 26.3 1.1E+02 0.0024 28.9 4.7 48 376-423 65-121 (202)
298 COG0678 AHP1 Peroxiredoxin [Po 26.0 1.6E+02 0.0035 26.6 5.4 40 287-330 57-97 (165)
299 PRK08942 D,D-heptose 1,7-bisph 25.5 37 0.00081 30.9 1.4 16 161-176 2-17 (181)
300 PRK10513 sugar phosphate phosp 24.8 1.7E+02 0.0037 28.1 6.0 37 290-330 24-60 (270)
301 PF06506 PrpR_N: Propionate ca 24.6 1.6E+02 0.0034 26.8 5.4 59 361-426 92-154 (176)
302 cd01491 Ube1_repeat1 Ubiquitin 24.4 7.2E+02 0.016 24.8 10.8 112 306-422 20-137 (286)
303 COG5663 Uncharacterized conser 24.0 27 0.00058 32.2 0.1 88 285-404 71-162 (194)
304 TIGR00213 GmhB_yaeD D,D-heptos 23.8 42 0.0009 30.5 1.3 13 163-175 2-14 (176)
305 PRK10696 tRNA 2-thiocytidine b 23.6 4E+02 0.0087 25.8 8.3 109 306-420 60-199 (258)
306 PF05152 DUF705: Protein of un 23.3 45 0.00097 33.3 1.5 32 295-330 151-182 (297)
307 CHL00200 trpA tryptophan synth 22.3 1.8E+02 0.0039 28.6 5.6 35 389-423 112-152 (263)
308 PRK12496 hypothetical protein; 22.2 66 0.0014 29.3 2.3 38 385-422 77-116 (164)
309 KOG0323 TFIIF-interacting CTD 22.1 1.2E+02 0.0026 33.8 4.6 38 284-326 199-236 (635)
310 COG5610 Predicted hydrolase (H 22.0 3.2E+02 0.007 29.3 7.4 123 283-424 94-221 (635)
311 PF00875 DNA_photolyase: DNA p 21.7 1.3E+02 0.0028 26.9 4.1 45 288-338 52-96 (165)
312 cd00757 ThiF_MoeB_HesA_family 21.5 6.9E+02 0.015 23.6 10.6 112 306-421 22-142 (228)
313 PLN02591 tryptophan synthase 21.5 1.8E+02 0.0038 28.5 5.2 34 389-422 99-138 (250)
314 cd04724 Tryptophan_synthase_al 21.1 7.4E+02 0.016 23.8 10.2 103 289-413 116-224 (242)
315 cd03769 SR_IS607_transposase_l 20.6 2.2E+02 0.0047 24.7 5.2 39 287-328 47-90 (134)
316 PF14336 DUF4392: Domain of un 20.5 3.1E+02 0.0068 27.4 6.9 39 288-329 62-100 (291)
317 KOG3107 Predicted haloacid deh 20.4 2.3E+02 0.005 29.5 5.9 29 358-388 408-436 (468)
318 PRK05157 pyrroloquinoline quin 20.3 8.2E+02 0.018 23.9 9.9 113 3-142 105-227 (246)
319 PRK00977 exodeoxyribonuclease 20.2 1.7E+02 0.0037 23.4 4.0 37 96-134 10-46 (80)
No 1
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.96 E-value=1.2e-28 Score=240.78 Aligned_cols=228 Identities=18% Similarity=0.273 Sum_probs=184.8
Q ss_pred CCCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 012437 160 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 239 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~ 239 (463)
+++++||+|||.|||++-+- .++++. +||.+....+.+++.|.++..+++++|+|+|.++
T Consensus 20 ~~~lqvisDFD~Tlt~~~~~--------~g~~~~------------s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~ 79 (277)
T TIGR01544 20 AAKLQIISDFDYTLSRFSYE--------DGKRCP------------TCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDP 79 (277)
T ss_pred hhheEEeeccCccceeeecC--------CCCCCc------------chHhHHhhCCCCCHHHHHHHHHHHhhccceecCC
Confidence 48999999999999987321 223332 5777888889999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCH
Q 012437 240 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 317 (463)
Q Consensus 240 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~ 317 (463)
.++.+++.++|. |||++++..+++. +++++++.++.+ .+.++||+.+|++.|+++| ++++|+|+|+ .
T Consensus 80 ~~~~~eK~~~m~---eWw~k~~~l~~~~----~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~G---Ipv~IvS~G~-~ 148 (277)
T TIGR01544 80 VLTVEEKYPYMV---EWWTKSHGLLVQQ----AFPKAKIKEIVAESDVMLKDGYENFFDKLQQHS---IPVFIFSAGI-G 148 (277)
T ss_pred CCChHHhhhHHH---HHHHHHHHHHhcC----CCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCC---CcEEEEeCCc-H
Confidence 999999999874 9999999999874 569999999987 8999999999999999999 9999999998 8
Q ss_pred HHHHHHHHhcCC--CcceEEeeceEEc-cceeeccccccCCCCcchHHHHHH-HHHHhC-CCCCceEEEEcCCcccHHHh
Q 012437 318 DLIRASFSSAGL--NALNVHANEFSFK-ESISTGEIIEKVESPIDKVQAFNN-TLEKYG-TDRKNLSVYIGDSVGDLLCL 392 (463)
Q Consensus 318 ~~I~~~l~~~gl--~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~~l~~-l~~~~~-~~~~~~vIyIGDs~tDl~~l 392 (463)
.+|+.+|++.|+ .+++|+||+|.|+ +|+++| +.+++....+|.+.+.+ .....+ ...+.++|++|||.||++|+
T Consensus 149 ~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma 227 (277)
T TIGR01544 149 NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMA 227 (277)
T ss_pred HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHh
Confidence 999999998887 4669999999995 599999 45566777889876654 333332 12357899999999999998
Q ss_pred Hhc-C---e-eEEEcC---ChhHHHHhhhhCceee
Q 012437 393 LEA-D---I-GIVIGS---SSSLRRVGSQFGVTFI 419 (463)
Q Consensus 393 ~~A-d---i-giv~~~---~~~L~~~~~~~gi~~~ 419 (463)
.-. . + .|-|-+ ...|.+|.+.+.|-++
T Consensus 228 ~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 228 DGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred cCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 765 1 1 222322 2467778877776444
No 2
>COG0819 TenA Putative transcription activator [Transcription]
Probab=99.95 E-value=3.2e-28 Score=230.31 Aligned_cols=124 Identities=35% Similarity=0.570 Sum_probs=113.2
Q ss_pred CCcCCCCccc--ccCCChhHHHHHHHHHHHhc-CCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHHHHHHHHHHhhc
Q 012437 1 MQEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 77 (463)
Q Consensus 1 ~~~~gi~~~~--~~~~~~~~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y~~~~~~~~~~~ 77 (463)
+++|||++++ ..+++|+|.+||+||++++. |++ +++++||+||+|+|++||+++.+..
T Consensus 90 ~~~lgis~~~~~~~~~~~~~~aYt~ym~~~~~~g~~-------------------~~~~aAl~PC~~~Y~eig~~~~~~~ 150 (218)
T COG0819 90 AEELGISLDELLKTEPSPANKAYTRYLLDTAYSGSF-------------------AELLAALLPCLWGYAEIGKRLKAKP 150 (218)
T ss_pred HHHhCCCHHHHHhcCCCchHHHHHHHHHHHHhcCCH-------------------HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4689999843 57899999999999999996 655 6899999999999999999998864
Q ss_pred cCCCCcccccccccccCChHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012437 78 NANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLA 145 (463)
Q Consensus 78 ~~~~~~~~y~~Wi~~y~s~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~~~~~~ 145 (463)
. ..+++||++||++|+|++|++.|++++++||++++..+++++++|.++|.+|+++|++||+|+ |.
T Consensus 151 ~-~~~~~~Y~~Wi~~Y~s~ef~~~v~~~~~~ld~~~~~~~~~~~~~l~~iF~~ss~~E~~Fwd~a-~~ 216 (218)
T COG0819 151 R-ASPNPPYQEWIDTYASEEFQEAVEELEALLDSLAENSSEEELEKLKQIFLTASRFELAFWDMA-YR 216 (218)
T ss_pred c-cCCCCcHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 3 347899999999999999999999999999999999999999999999999999999999999 64
No 3
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=99.92 E-value=2.9e-24 Score=192.74 Aligned_cols=196 Identities=19% Similarity=0.245 Sum_probs=143.7
Q ss_pred CCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccC
Q 012437 161 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 240 (463)
Q Consensus 161 ~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~~ 240 (463)
.+.+|++|||||||.+|+...|.... ...+|+.+.+.++.+-
T Consensus 2 kk~vi~sDFDGTITl~Ds~~~itdtf-----------------------~~~e~k~l~~~vls~t--------------- 43 (220)
T COG4359 2 KKPVIFSDFDGTITLNDSNDYITDTF-----------------------GPGEWKALKDGVLSKT--------------- 43 (220)
T ss_pred CceEEEecCCCceEecchhHHHHhcc-----------------------CchHHHHHHHHHhhCc---------------
Confidence 46799999999999999998877632 3467776655444332
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh-cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 012437 241 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 319 (463)
Q Consensus 241 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 319 (463)
++..+-.. ++..+ -+.+.+++.+... ++.++|||++|++++++++ +|++|||+|. ..|
T Consensus 44 iS~rd~~g--------------~mf~~---i~~s~~Eile~llk~i~Idp~fKef~e~ike~d---i~fiVvSsGm-~~f 102 (220)
T COG4359 44 ISFRDGFG--------------RMFGS---IHSSLEEILEFLLKDIKIDPGFKEFVEWIKEHD---IPFIVVSSGM-DPF 102 (220)
T ss_pred eeHHHHHH--------------HHHHh---cCCCHHHHHHHHHhhcccCccHHHHHHHHHHcC---CCEEEEeCCC-chH
Confidence 22222211 22211 1346677776654 5999999999999999999 9999999998 889
Q ss_pred HHHHHHhcC----CCcceEEeeceEEcc-ceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHh
Q 012437 320 IRASFSSAG----LNALNVHANEFSFKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 394 (463)
Q Consensus 320 I~~~l~~~g----l~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~ 394 (463)
|+.+++..+ +..++|++|...+.. |-..-...+....|.||...++.+... +..++|+|||++|+.+++.
T Consensus 103 I~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI~~l~e~-----~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 103 IYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVIHELSEP-----NESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred HHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhHHHhhcC-----CceEEEecCCcccccHhhh
Confidence 999998764 334455666555532 211001113467789999999998874 4679999999999999999
Q ss_pred cCeeEEEcCChhHHHHhhhhCceeeecCc
Q 012437 395 ADIGIVIGSSSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 395 Adigiv~~~~~~L~~~~~~~gi~~~p~~~ 423 (463)
.| ++| ++..|..+|++++++|.+|+.
T Consensus 178 sD--llF-AK~~L~nyc~eqn~~f~~fe~ 203 (220)
T COG4359 178 SD--LLF-AKDDLLNYCREQNLNFLEFET 203 (220)
T ss_pred hh--hHh-hHHHHHHHHHHcCCCCccccc
Confidence 99 556 666899999999999999986
No 4
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.92 E-value=5.7e-24 Score=202.27 Aligned_cols=199 Identities=22% Similarity=0.207 Sum_probs=165.5
Q ss_pred CCCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 012437 160 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 239 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~ 239 (463)
+.+.+++||||+|||...+++.+++.+. .......++...+..+
T Consensus 3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g----------------------~~~~v~~~t~~~~~~~-------------- 46 (212)
T COG0560 3 RMKKLAVFDLDGTLINAELIDELARGAG----------------------VGEEVLAITERAMRGE-------------- 46 (212)
T ss_pred CccceEEEecccchhhHHHHHHHHHHhC----------------------CHHHHHHHHHHHhccc--------------
Confidence 4677999999999999778887777551 2333444444333222
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhc-CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHH
Q 012437 240 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 318 (463)
Q Consensus 240 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~-i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~ 318 (463)
.+|.+.+. .++ .+++|++.+++.+..+. +.++||+.++++++++.| +.+.|||+|+ ..
T Consensus 47 -------~~~~~~~~-------~~v---~~l~g~~~~~v~~~~~~~~~l~~ga~elv~~lk~~G---~~v~iiSgg~-~~ 105 (212)
T COG0560 47 -------LDFEESLR-------LRV---ALLKGLPVEVLEEVREEFLRLTPGAEELVAALKAAG---AKVVIISGGF-TF 105 (212)
T ss_pred -------ccHHHHHH-------HHH---HHhCCCCHHHHHHHHHhcCcCCccHHHHHHHHHHCC---CEEEEEcCCh-HH
Confidence 12222222 233 67899999999999999 999999999999999999 9999999998 78
Q ss_pred HHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee
Q 012437 319 LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 398 (463)
Q Consensus 319 ~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig 398 (463)
+++++.+.+|+ .++++|.+..++|++||...++++.+.+|..+++++.+..+.+ ..++++||||.||++|+..||.|
T Consensus 106 lv~~ia~~lg~--d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 106 LVEPIAERLGI--DYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIP-LEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred HHHHHHHHhCC--chheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCCC
Confidence 99999998886 5689999999989999999999999999999999999988763 57899999999999999999999
Q ss_pred EEEcCChhHHHHhhhhCcee
Q 012437 399 IVIGSSSSLRRVGSQFGVTF 418 (463)
Q Consensus 399 iv~~~~~~L~~~~~~~gi~~ 418 (463)
|++++++.|.+.++..+++.
T Consensus 183 ia~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 183 IAVNPKPKLRALADVRIWPI 202 (212)
T ss_pred eEeCcCHHHHHHHHHhcChh
Confidence 99999999999999988865
No 5
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.91 E-value=3.6e-23 Score=197.17 Aligned_cols=193 Identities=18% Similarity=0.183 Sum_probs=140.8
Q ss_pred EEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccCCCH
Q 012437 164 IIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNY 243 (463)
Q Consensus 164 ~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~~~~~ 243 (463)
+|+||||||||.+||+..+++.. ..+.|..+...++.+- +++
T Consensus 1 ~~~fDFDgTit~~d~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~---------------~~~ 42 (214)
T TIGR03333 1 FIICDFDGTITNNDNIISIMKQF-----------------------APPEWEALKDGVLSKT---------------LSI 42 (214)
T ss_pred CEEeccCCCCCcchhHHHHHHHh-----------------------CcHHHHHHHHHHHcCC---------------ccH
Confidence 48999999999999987776632 2356766655444321 233
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHh-hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHH
Q 012437 244 ETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 322 (463)
Q Consensus 244 ~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~-~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~ 322 (463)
.+... ++. .+++.-..+++.++. +.+.++||+.++++.++++| ++++|+|+|. ..+|+.
T Consensus 43 ~e~~~--------------~~~--~~~~~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~~i~~ 102 (214)
T TIGR03333 43 QEGVG--------------RMF--GLLPSSLKEEITSFVLETAEIREGFREFVAFINEHG---IPFYVISGGM-DFFVYP 102 (214)
T ss_pred HHHHH--------------HHH--hhCCCchHHHHHHHHHhcCcccccHHHHHHHHHHCC---CeEEEECCCc-HHHHHH
Confidence 32221 111 222232345777754 46899999999999999998 9999999997 789999
Q ss_pred HHHhcCCCcceEEeeceEEccceeeccc-cc-----cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcC
Q 012437 323 SFSSAGLNALNVHANEFSFKESISTGEI-IE-----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 396 (463)
Q Consensus 323 ~l~~~gl~~~~I~aN~l~~~~g~~tG~~-~~-----~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Ad 396 (463)
+++.++. ...|+||++.++++..++.. .+ ...||.||..+++++... +.+++|||||.+|+++++.||
T Consensus 103 il~~~~~-~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~-----~~~~i~iGDg~~D~~~a~~Ad 176 (214)
T TIGR03333 103 LLEGIVE-KDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEP-----NDYHIVIGDSVTDVEAAKQSD 176 (214)
T ss_pred HHHhhCC-cccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHHhhc-----CCcEEEEeCCHHHHHHHHhCC
Confidence 9987643 35799999999875444432 11 123488999999987652 467999999999999999999
Q ss_pred eeEEEcCChhHHHHhhhhCceeeecCc
Q 012437 397 IGIVIGSSSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 397 igiv~~~~~~L~~~~~~~gi~~~p~~~ 423 (463)
+ ++. +..|..+|++.++++.|+.+
T Consensus 177 ~--~~a-r~~l~~~~~~~~~~~~~~~~ 200 (214)
T TIGR03333 177 L--CFA-RDYLLNECEELGLNHAPFQD 200 (214)
T ss_pred e--eEe-hHHHHHHHHHcCCCccCcCC
Confidence 5 453 34688999999999999975
No 6
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.90 E-value=1.4e-22 Score=193.74 Aligned_cols=196 Identities=19% Similarity=0.175 Sum_probs=141.9
Q ss_pred CCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccC
Q 012437 161 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 240 (463)
Q Consensus 161 ~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~~ 240 (463)
++.+|+||||||||..|+...+++.. ..+.|..+.+.|+++.
T Consensus 2 ~~~~vifDfDgTi~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~g~--------------- 43 (219)
T PRK09552 2 MSIQIFCDFDGTITNNDNIIAIMKKF-----------------------APPEWEELKDDILSQE--------------- 43 (219)
T ss_pred CCcEEEEcCCCCCCcchhhHHHHHHh-----------------------CHHHHHHHHHHHHhCC---------------
Confidence 35699999999999999976544321 1245666666554432
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHh-hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 012437 241 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 319 (463)
Q Consensus 241 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~-~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 319 (463)
+++.+-.. ++. ..+.+-..+++.++. +.+.++||+.++++.++++| ++++|+|+|+ ..+
T Consensus 44 ~~~~~~~~--------------~~~--~~l~~~~~~~~~~~~~~~~~l~pG~~e~l~~l~~~g---~~~~IvS~~~-~~~ 103 (219)
T PRK09552 44 LSIQEGVG--------------QMF--QLLPSNLKEEIIQFLLETAEIREGFHEFVQFVKENN---IPFYVVSGGM-DFF 103 (219)
T ss_pred cCHHHHHH--------------HHH--HhCCCCchHHHHHHHHhCCCcCcCHHHHHHHHHHcC---CeEEEECCCc-HHH
Confidence 22222211 111 224444557776654 57899999999999999999 9999999998 789
Q ss_pred HHHHHHhcCCCcceEEeeceEEccceeec-ccccc-----CCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhH
Q 012437 320 IRASFSSAGLNALNVHANEFSFKESISTG-EIIEK-----VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLL 393 (463)
Q Consensus 320 I~~~l~~~gl~~~~I~aN~l~~~~g~~tG-~~~~~-----~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~ 393 (463)
|+.+++++ +....|+||.+.++++..+. .+.+. ..++.+|..+++++... ..++||||||.+|+++++
T Consensus 104 i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~-----~~~~i~iGDs~~Di~aa~ 177 (219)
T PRK09552 104 VYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSDT-----NDFHIVIGDSITDLEAAK 177 (219)
T ss_pred HHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhccC-----CCCEEEEeCCHHHHHHHH
Confidence 99999987 66567999999987643332 22221 12467899988876532 468999999999999999
Q ss_pred hcCeeEEEcCChhHHHHhhhhCceeeecCc
Q 012437 394 EADIGIVIGSSSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 394 ~Adigiv~~~~~~L~~~~~~~gi~~~p~~~ 423 (463)
.||+ ++. ...|.++|++++++++|+++
T Consensus 178 ~Ag~--~~a-~~~l~~~~~~~~~~~~~~~~ 204 (219)
T PRK09552 178 QADK--VFA-RDFLITKCEELGIPYTPFET 204 (219)
T ss_pred HCCc--cee-HHHHHHHHHHcCCCccccCC
Confidence 9996 443 44788999999999999975
No 7
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional
Probab=99.90 E-value=9.7e-24 Score=226.54 Aligned_cols=120 Identities=29% Similarity=0.528 Sum_probs=106.0
Q ss_pred CcCCCCcccccCCChhHHHHHHHHHHHhc-CCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHHHHHHHHHHhhccCC
Q 012437 2 QEWGTDLAKMATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNAN 80 (463)
Q Consensus 2 ~~~gi~~~~~~~~~~~~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y~~~~~~~~~~~~~~ 80 (463)
++||+ +.+++|+|.+|++||++++. |++ +++++||+||+|+|.+||+++.... ..
T Consensus 408 ~~~~~----~~~~~p~~~aY~~~l~~~a~~~~~-------------------~~~l~AllPC~~~Y~~ig~~l~~~~-~~ 463 (530)
T PRK14713 408 GDRDA----DTAPSPVTLAYTDFLLARAAGGSY-------------------AVGAAAVLPCFWLYAEVGAELHARA-GN 463 (530)
T ss_pred HHhCc----cCCCChHHHHHHHHHHHHHhcCCH-------------------HHHHHHHHhHHHHHHHHHHHHHhhc-cC
Confidence 34555 35789999999999999986 544 6899999999999999999987531 12
Q ss_pred CCcccccccccccCChHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 012437 81 EGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQ 146 (463)
Q Consensus 81 ~~~~~y~~Wi~~y~s~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~~~~~~~ 146 (463)
.++++|++||++|++++|.+.++++++++|++++.++++++++|+++|.++|+||++||+|+ |.+
T Consensus 464 ~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~~~~~F~~a~~~E~~Fwd~A-~~~ 528 (530)
T PRK14713 464 PDDHPYAEWLQTYADPEFAAATRRAIAFVDRAFRAASPAERAAMARAFLTACRYELEFFDQA-RRR 528 (530)
T ss_pred CCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence 25789999999999999999999999999999999999999999999999999999999999 865
No 8
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=99.89 E-value=5.3e-23 Score=196.63 Aligned_cols=200 Identities=21% Similarity=0.355 Sum_probs=146.1
Q ss_pred ccccccchhhhhHHHHHHHHHHHHhhcCCCCcccCCCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--
Q 012437 206 SSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-- 283 (463)
Q Consensus 206 ~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-- 283 (463)
+||.+....+.+++.|.++..+++++|+|+|.++.++.+++.++| .|||+++|+.+++. ++++++|.++++
T Consensus 15 sshgil~~~~~~~~~~~~k~~~L~~kY~PIE~dp~~s~eEK~p~M---~EWw~kah~llv~~----~l~k~~i~~~V~~s 87 (246)
T PF05822_consen 15 SSHGILENSKLLPEEYRKKLKELFEKYYPIEIDPTMSIEEKIPHM---EEWWTKAHELLVEQ----GLTKSEIEEAVKES 87 (246)
T ss_dssp -HHHHHHTSTTS-HHHHHHHHHHHHHHHHHHT-SSS-HHHHHHHH---HHHHHHHHHHHHHH----T-BGGGHHHHHHCS
T ss_pred ChHHHHhcCCcCCHHHHHHHHHHHhhccccccCCCCCHHHHHHHH---HHHHHHHHHHHHhc----CcCHHHHHHHHHhc
Confidence 577788888999999999999999999999999999999999977 59999999999986 469999999887
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcC--CCcceEEeeceEEcc-ceeeccccccCCCCcch
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG--LNALNVHANEFSFKE-SISTGEIIEKVESPIDK 360 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g--l~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K 360 (463)
.+.||+|+.+|++.|++++ +|+.|+|+|. +++|+.+|++.| .++++|+||.|.|++ |...| |.+++....+|
T Consensus 88 ~i~LRdg~~~~f~~L~~~~---IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~g-F~~~lIH~~NK 162 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHN---IPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVG-FKGPLIHTFNK 162 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT-----EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEE-E-SS---TT-H
T ss_pred chhhhcCHHHHHHHHHhcC---CCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEee-cCCCceEEeeC
Confidence 5899999999999999998 9999999999 999999999887 478899999999975 77777 55566677778
Q ss_pred HHHHH---HHHHHhCCCCCceEEEEcCCcccHHHhHhc-Ce------eEEEcC-ChhHHHHhhhhCceee
Q 012437 361 VQAFN---NTLEKYGTDRKNLSVYIGDSVGDLLCLLEA-DI------GIVIGS-SSSLRRVGSQFGVTFI 419 (463)
Q Consensus 361 ~~~l~---~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A-di------giv~~~-~~~L~~~~~~~gi~~~ 419 (463)
....- .+... ...+.+++..|||.+|+.|..-. +. |++-.. ...|.+|.+.+.|-++
T Consensus 163 n~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv 230 (246)
T PF05822_consen 163 NESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLV 230 (246)
T ss_dssp HHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEE
T ss_pred CcccccCchHHHH--hccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEE
Confidence 75322 12222 22467899999999999999766 32 333222 2468888888876443
No 9
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.89 E-value=5.2e-22 Score=199.96 Aligned_cols=192 Identities=19% Similarity=0.202 Sum_probs=155.6
Q ss_pred CCCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 012437 160 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 239 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~ 239 (463)
+.+.+|+||||||++..+++..+++.. + ....+..+++.++.+
T Consensus 108 ~~~~LvvfDmDGTLI~~e~i~eia~~~-----g-----------------~~~~v~~it~~~m~G--------------- 150 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQIECIDEIAKLA-----G-----------------TGEEVAEVTERAMRG--------------- 150 (322)
T ss_pred cCCCEEEEECCCCCcchHHHHHHHHHh-----C-----------------CchHHHHHHHHHHcC---------------
Confidence 567899999999999999999888854 1 334555555544332
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH
Q 012437 240 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 319 (463)
Q Consensus 240 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~ 319 (463)
+.+|.+.+. .++ ..++|.+.+.+.+..+.++++||+.++++.|+++| +++.|+|+|+ ..+
T Consensus 151 ------eldf~esl~-------~rv---~~l~g~~~~il~~v~~~l~l~pGa~elL~~Lk~~G---~~~aIvSgg~-~~~ 210 (322)
T PRK11133 151 ------ELDFEASLR-------QRV---ATLKGADANILQQVRENLPLMPGLTELVLKLQALG---WKVAIASGGF-TYF 210 (322)
T ss_pred ------CcCHHHHHH-------HHH---HHhCCCCHHHHHHHHHhCCCChhHHHHHHHHHHcC---CEEEEEECCc-chh
Confidence 222222222 244 35688887778877788999999999999999999 9999999998 678
Q ss_pred HHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeE
Q 012437 320 IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399 (463)
Q Consensus 320 I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigi 399 (463)
++.++++.|+ .++++|.+++.+|..||.+.+.+..+..|.+.++++.+..+. ...++|+||||.||++|+..||+||
T Consensus 211 ~~~l~~~Lgl--d~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi-~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 211 ADYLRDKLRL--DAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEI-PLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred HHHHHHHcCC--CeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCC-ChhhEEEEECCHHHHHHHHHCCCeE
Confidence 8888887776 678999999999999998877777788999999999988776 3578999999999999999999999
Q ss_pred EEcCChhHHHHh
Q 012437 400 VIGSSSSLRRVG 411 (463)
Q Consensus 400 v~~~~~~L~~~~ 411 (463)
++++++.+++.+
T Consensus 288 A~nAkp~Vk~~A 299 (322)
T PRK11133 288 AYHAKPKVNEQA 299 (322)
T ss_pred EeCCCHHHHhhC
Confidence 999999988655
No 10
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional
Probab=99.89 E-value=3.2e-23 Score=230.39 Aligned_cols=112 Identities=26% Similarity=0.397 Sum_probs=102.8
Q ss_pred cCCChhHHHHHHHHHHHhc-CCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHHHHHHHHHHhhccCCCCcccccccc
Q 012437 12 ATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWI 90 (463)
Q Consensus 12 ~~~~~~~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y~~~~~~~~~~~~~~~~~~~y~~Wi 90 (463)
.+++|+|.+|++||++++. |++ +++++||+||+|+|++||+++.+.. .++|||++||
T Consensus 640 ~~~~p~~~aYt~~l~~~a~~g~~-------------------~~~laAllPC~w~Y~~ig~~l~~~~---~~~~~Y~~WI 697 (755)
T PRK09517 640 SAPSPVTMAYTDFLIARTYTEDY-------------------VVGVAAVLPCYWLYAEIGLMLAEQN---HDEHPYKDWL 697 (755)
T ss_pred CCCChHHHHHHHHHHHHHhcCCH-------------------HHHHHHHHHHHHHHHHHHHHHHhcc---CCCchHHHHH
Confidence 5789999999999999986 533 6899999999999999999997632 2578999999
Q ss_pred cccCChHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 012437 91 DNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQ 146 (463)
Q Consensus 91 ~~y~s~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~~~~~~~ 146 (463)
++|++++|.+.+.++++++|++++.++++++++|+++|.++|+||++||+|+ |.+
T Consensus 698 ~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~l~~~F~~a~~lE~~Fwd~A-~~~ 752 (755)
T PRK09517 698 NTYSGEEFIAGTRAAIARVEKALENAGPEQRVDAARAFLSASVHEREFFDQA-TRH 752 (755)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Confidence 9999999999999999999999999999999999999999999999999999 875
No 11
>PF03070 TENA_THI-4: TENA/THI-4/PQQC family; InterPro: IPR004305 Proteins containing this domain are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes. In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase []. The THI-4 protein, which is involved in thiamine biosynthesis, also contains this domain. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4 []. The exact molecular function of this domain is uncertain.; PDB: 2RD3_D 3RM5_B 1UDD_D 1Z72_B 3HML_A 3HLX_A 3HNH_A 3DDE_B 3OQL_A 2A6B_A ....
Probab=99.88 E-value=1.9e-23 Score=198.09 Aligned_cols=123 Identities=35% Similarity=0.589 Sum_probs=111.0
Q ss_pred CcCCCCccc--ccCCChhHHHHHHHHHHHhc-CCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHHHHHHHHHHhhcc
Q 012437 2 QEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLN 78 (463)
Q Consensus 2 ~~~gi~~~~--~~~~~~~~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y~~~~~~~~~~~~ 78 (463)
++|||+.++ +.+++|+|.+|++||++++. |++ +++++||+||+|+|.+||+++.+.+.
T Consensus 84 ~~~gi~~~~~~~~~~~p~~~~y~~~l~~~a~~~~~-------------------~~~l~al~pc~~~Y~~~~~~~~~~~~ 144 (210)
T PF03070_consen 84 EELGISREDLENIEPSPATRAYTDFLLSLAQTGSL-------------------AEGLAALLPCEWIYAEIGKRLAEKLR 144 (210)
T ss_dssp HHTTSHHHHHHHSTC-HHHHHHHHHHHHHHHHSSH-------------------HHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHhCCCHHHHHhhhhhhHHHHHHHHHHHHhccCCH-------------------HHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 468999876 67899999999999999985 544 68999999999999999999987653
Q ss_pred CCCCcccccccccccCChHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012437 79 ANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLA 145 (463)
Q Consensus 79 ~~~~~~~y~~Wi~~y~s~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~~~~~~ 145 (463)
..++++|++||+.|++++|.+.+.++++++|+++..++++++++++++|.++|++|+.||+++ |+
T Consensus 145 -~~~~~~y~~wi~~y~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~E~~Fwd~a-~~ 209 (210)
T PF03070_consen 145 -APEDNPYQEWIDMYASEEFEAFVEWLEELLDELAAEASDEERERLEEIFRRSCELEYDFWDAA-YN 209 (210)
T ss_dssp -TTSSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_pred -CCCCccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 346789999999999999999999999999999999999999999999999999999999998 64
No 12
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.88 E-value=8.9e-22 Score=188.69 Aligned_cols=130 Identities=18% Similarity=0.253 Sum_probs=103.4
Q ss_pred CCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEcc-ceee
Q 012437 271 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKE-SIST 347 (463)
Q Consensus 271 ~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~-g~~t 347 (463)
.|++.++|.+..+.+++.|||.++++.+.++. .+.+++|||++. ..||+.+|+++|+... +|++|...|++ |.+.
T Consensus 56 ~gvt~~~I~~~l~~ip~~pgm~~~l~~l~~~~-~~~~~~IiSDaN-s~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~ 133 (234)
T PF06888_consen 56 QGVTPEDIRDALRSIPIDPGMKELLRFLAKNQ-RGFDLIIISDAN-SFFIETILEHHGLRDCFSEIFTNPACFDADGRLR 133 (234)
T ss_pred cCCCHHHHHHHHHcCCCCccHHHHHHHHHhcC-CCceEEEEeCCc-HhHHHHHHHhCCCccccceEEeCCceecCCceEE
Confidence 57999999999999999999999999996421 239999999996 8999999999998654 89999999975 5432
Q ss_pred -cccc---c-cCCCCcchHHHHHHHHHHhCC--CCCceEEEEcCCcccHHHhHh---cCeeEEEcCC
Q 012437 348 -GEII---E-KVESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDLLCLLE---ADIGIVIGSS 404 (463)
Q Consensus 348 -G~~~---~-~~~~g~~K~~~l~~l~~~~~~--~~~~~vIyIGDs~tDl~~l~~---Adigiv~~~~ 404 (463)
.+.. + .+..++||..++++++..... ..+.++||||||.||+|+++. +| +|+..+
T Consensus 134 v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D--~v~~R~ 198 (234)
T PF06888_consen 134 VRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRD--VVFPRK 198 (234)
T ss_pred EeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCC--EEecCC
Confidence 1222 2 234568999999999976411 135799999999999999986 67 666443
No 13
>PTZ00347 phosphomethylpyrimidine kinase; Provisional
Probab=99.88 E-value=1.9e-22 Score=215.55 Aligned_cols=137 Identities=31% Similarity=0.486 Sum_probs=109.1
Q ss_pred ccCCChhHHHHHHHHHHHhcCCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHHHHHHHHHHhhccCCCCcccccccc
Q 012437 11 MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWI 90 (463)
Q Consensus 11 ~~~~~~~~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y~~~~~~~~~~~~~~~~~~~y~~Wi 90 (463)
..+++|+|++||+||+++|..+.++ ++++++||+||+|+|++||+++...... .++|||++||
T Consensus 105 ~~~~~p~~~aY~~~l~~~a~~g~~~----------------~~~~l~Al~pC~~~Y~~ig~~l~~~~~~-~~~~~y~~Wi 167 (504)
T PTZ00347 105 AAGPEAACRKYVDFLLASGNADTLG----------------PSVVIAAVIPCARLYAWVGQELTNEVEL-TESHPFRRWL 167 (504)
T ss_pred ccCCCHHHHHHHHHHHHHHhcCCcc----------------hHHHHHHHHHHHHHHHHHHHHHHhccCC-CCCChHHHHH
Confidence 3568999999999999999633321 2689999999999999999998763221 2578999999
Q ss_pred cccCChHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCcccccccCCCCCCCeEEEcccc
Q 012437 91 DNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQPTVVPLIKGHNPAGDRLIIFSDFD 170 (463)
Q Consensus 91 ~~y~s~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~~~~~~~~~~~p~~~~~~~~~~~~~ii~DFD 170 (463)
++|++++|.+.+.+++++||+++. ++++++++++|+++|+||++||+|+ |.+. .||..-...+ +..+.|.=.|
T Consensus 168 ~~y~~~~f~~~~~~~~~~ld~~~~---~~~~~~~~~~F~~~~~~E~~Fw~~A-y~~~-~w~~~~~~~~--~~vLtIag~D 240 (504)
T PTZ00347 168 LSYSDEPINTSVEQLESLLDKYIR---PGEFSEVAQAYRRAMELEYDFFDSF-GYCL-GRPVENPMKI--PTVLTVSGSD 240 (504)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHhc---hhhHHHHHHHHHHHHHHHHHHhHhH-Hhhh-cccccCCCCC--CeEEEEeCcC
Confidence 999999999999999999999974 3678889999999999999999999 8865 3886444322 3344444444
Q ss_pred c
Q 012437 171 L 171 (463)
Q Consensus 171 ~ 171 (463)
-
T Consensus 241 ~ 241 (504)
T PTZ00347 241 S 241 (504)
T ss_pred C
Confidence 3
No 14
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.87 E-value=1.6e-22 Score=189.82 Aligned_cols=228 Identities=17% Similarity=0.262 Sum_probs=172.0
Q ss_pred CCCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccc-hhhhhHHHHHHHHHHHHhhcCCCCcc
Q 012437 160 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRN-TWGLLSKQYTEEYEQCIESFMPSEKV 238 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~i~~~y~~~~~~~~~~~~P~~~~ 238 (463)
+.++++|+|||.|||++-|- .+++++ |++.+.+ ..+.+...|.+++.+++.+|+|+|.+
T Consensus 36 a~~~~vIsdfd~TLSrfa~~--------~G~r~p------------S~~~Vfd~~~~~~~~e~~~k~~~LyhkY~PIEid 95 (298)
T KOG3128|consen 36 AGKLQVISDFDYTLSRFATE--------QGKRCP------------SCFGVFDDNVKRLKPECRAKFVALYHKYYPIEID 95 (298)
T ss_pred ccceeEeecCchhHHHHHHh--------hcCcCC------------ccccchhhhhhcCCHHHHHHHHHHHhhccCcccC
Confidence 58999999999999986321 244454 3444665 78889999999999999999999999
Q ss_pred cCCCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC
Q 012437 239 ENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC 316 (463)
Q Consensus 239 ~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s 316 (463)
+.++++++.++|+ |||.+||..+++ .|++++.|++.+. ++.||+|+.+|+..|++++ +|+.|+|+|+
T Consensus 96 P~ltieEKvp~Me---eWW~kSH~Lliq----~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~---IP~~iFSAGi- 164 (298)
T KOG3128|consen 96 PVLTIEEKVPHME---EWWTKSHELLIQ----GGFSKNAIDDIVAESNIALREGYEEFFEALQAHE---IPLLIFSAGI- 164 (298)
T ss_pred CCCChhhhchHHH---HHHhcccceeec----CCcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CceEEEecch-
Confidence 9999999999885 999999999987 4679999999877 5799999999999999999 9999999999
Q ss_pred HHHHHHHHHhcC--CCcceEEeeceEEc-cceeeccccccCCCCcchHH-HHHHHHHHhC-CCCCceEEEEcCCcccHHH
Q 012437 317 GDLIRASFSSAG--LNALNVHANEFSFK-ESISTGEIIEKVESPIDKVQ-AFNNTLEKYG-TDRKNLSVYIGDSVGDLLC 391 (463)
Q Consensus 317 ~~~I~~~l~~~g--l~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~-~l~~l~~~~~-~~~~~~vIyIGDs~tDl~~ 391 (463)
++.|+.++++.. +++.+++||.+.|+ +|.+.| |..++....+|.. .++......+ ...+.++|..|||.+|+.|
T Consensus 165 gdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~g-F~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~m 243 (298)
T KOG3128|consen 165 GDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCG-FSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHM 243 (298)
T ss_pred HHHHHHHHHHHhccCccHHhhhhhhhhcccchhhh-hhHHHHHHHccchHHHHhhhHHHhhccCCceEEEeccccccchh
Confidence 899999998654 45778999999998 455444 3333333333432 2222111100 1135789999999999999
Q ss_pred hHhc-Ce------eEEEcC-ChhHHHHhhhhCceee
Q 012437 392 LLEA-DI------GIVIGS-SSSLRRVGSQFGVTFI 419 (463)
Q Consensus 392 l~~A-di------giv~~~-~~~L~~~~~~~gi~~~ 419 (463)
...+ ++ |..... ...+.+|.+.+.|-.+
T Consensus 244 a~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~ 279 (298)
T KOG3128|consen 244 ADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLV 279 (298)
T ss_pred hcCCcccccceeeecccchHHHHHHHHHhhcceEEe
Confidence 8864 22 222211 2467788888877444
No 15
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.85 E-value=9e-21 Score=174.16 Aligned_cols=121 Identities=21% Similarity=0.266 Sum_probs=101.6
Q ss_pred hhcCCCCHHHHHH-H-hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEc-cc
Q 012437 268 GVLKGINLEDIKK-A-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK-ES 344 (463)
Q Consensus 268 ~~f~Gi~~~~i~~-~-~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~-~g 344 (463)
..+++...+++.+ + .+.+.++||+.++++.++++| ++++|+|++. ..+|+.+++.+|+. ++++|.+.++ +|
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~i~~~~~~~g~~--~~~~~~~~~~~~g 126 (177)
T TIGR01488 53 ALLHRSRSEEVAKEFLARQVALRPGARELISWLKERG---IDTVIVSGGF-DFFVEPVAEKLGID--DVFANRLEFDDNG 126 (177)
T ss_pred HHhCCCCHHHHHHHHHHhcCCcCcCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCCc--hheeeeEEECCCC
Confidence 4567777666665 5 457889999999999999999 9999999997 78999999988874 6899999996 57
Q ss_pred eeeccccc-cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhc
Q 012437 345 ISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 395 (463)
Q Consensus 345 ~~tG~~~~-~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A 395 (463)
..+|++.+ +++.+.+|..+++++....+.+ ..+++|||||.+|++|++.|
T Consensus 127 ~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 127 LLTGPIEGQVNPEGECKGKVLKELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred EEeCccCCcccCCcchHHHHHHHHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 88887765 5677899999999988776542 56899999999999999875
No 16
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.84 E-value=4.1e-20 Score=176.10 Aligned_cols=137 Identities=23% Similarity=0.318 Sum_probs=116.8
Q ss_pred hcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeec
Q 012437 269 VLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTG 348 (463)
Q Consensus 269 ~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG 348 (463)
.|.+.+.+.+.+..+.+.++||+.++|+.|+++| ++++|+|+|+ ..+++.+++..|+. .+++|.+.++++..+|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~~i~--~~~~~~~~~~~~~~~~ 141 (219)
T TIGR00338 68 LLKGLPVELLKEVRENLPLTEGAEELVKTLKEKG---YKVAVISGGF-DLFAEHVKDKLGLD--AAFANRLEVEDGKLTG 141 (219)
T ss_pred HhCCCCHHHHHHHHhcCCcCCCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCCC--ceEeeEEEEECCEEEE
Confidence 3567788888888888999999999999999998 9999999997 88999999988874 5899999998888888
Q ss_pred cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhh
Q 012437 349 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS 412 (463)
Q Consensus 349 ~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~ 412 (463)
...++...+.+|...++.++...+. ...+++|||||.+|++++..||+++++++++.+++.++
T Consensus 142 ~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~ 204 (219)
T TIGR00338 142 LVEGPIVDASYKGKTLLILLRKEGI-SPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD 204 (219)
T ss_pred EecCcccCCcccHHHHHHHHHHcCC-CHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence 7665555566799999988877665 35789999999999999999999999988877776543
No 17
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.2e-20 Score=171.23 Aligned_cols=181 Identities=18% Similarity=0.172 Sum_probs=146.0
Q ss_pred CCCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCccc
Q 012437 160 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 239 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~ 239 (463)
..+-+|+||.|+|++..+-|+.||.... .......++.
T Consensus 14 ~~~~aVcFDvDSTvi~eEgIdelA~~~G----------------------~~~~Va~~T~-------------------- 51 (227)
T KOG1615|consen 14 RSADAVCFDVDSTVIQEEGIDELAAYCG----------------------VGEAVAEVTR-------------------- 51 (227)
T ss_pred HhcCeEEEecCcchhHHhhHHHHHHHhC----------------------chHHHHHHHH--------------------
Confidence 4556899999999999999999998762 2233333333
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCH
Q 012437 240 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 317 (463)
Q Consensus 240 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~ 317 (463)
..|.+..+|.++|. .|+ .+|++ +.+++.++.. ...+.||+++|+..|+++| ..++++|+|+ .
T Consensus 52 -rAMng~~~F~eaL~-------~Rl---~llqp-~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~---~~v~liSGGF-~ 115 (227)
T KOG1615|consen 52 -RAMNGEADFQEALA-------ARL---SLLQP-LQVQVEQFVIKQKPTLTPGIRELVSRLHARG---TQVYLISGGF-R 115 (227)
T ss_pred -HHhCCCCcHHHHHH-------HHH---HHhcc-cHHHHHHHHhcCCCccCCCHHHHHHHHHHcC---CeEEEEcCCh-H
Confidence 25677778888776 355 67888 6666666643 6899999999999999999 9999999999 8
Q ss_pred HHHHHHHHhcCCCcceEEeeceEEcc-ceeec-cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhc
Q 012437 318 DLIRASFSSAGLNALNVHANEFSFKE-SISTG-EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 395 (463)
Q Consensus 318 ~~I~~~l~~~gl~~~~I~aN~l~~~~-g~~tG-~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A 395 (463)
.+|.++..++|++-.+|+||.|.|+. |.++| ....+...+.+|.+++..+++.++ ...+++||||.||++|+..|
T Consensus 116 ~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk~~~---~~~~~mvGDGatDlea~~pa 192 (227)
T KOG1615|consen 116 QLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNYN---YKTIVMVGDGATDLEAMPPA 192 (227)
T ss_pred HHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHhCCC---hheeEEecCCccccccCCch
Confidence 99999999999988889999999975 77777 555677778899999999988543 46789999999999999998
Q ss_pred CeeEEE
Q 012437 396 DIGIVI 401 (463)
Q Consensus 396 digiv~ 401 (463)
+.-|.+
T Consensus 193 ~afi~~ 198 (227)
T KOG1615|consen 193 DAFIGF 198 (227)
T ss_pred hhhhcc
Confidence 754444
No 18
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.83 E-value=9.3e-20 Score=172.40 Aligned_cols=130 Identities=20% Similarity=0.239 Sum_probs=112.7
Q ss_pred CCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEcc-ceeecc
Q 012437 271 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGE 349 (463)
Q Consensus 271 ~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~-g~~tG~ 349 (463)
.|++.+++.+..+.+.++||+.++++.++++ .+++|||+++ ..+++++++++|++ +++||++.+++ |.+||.
T Consensus 53 ~g~~~~~i~~~~~~i~l~pga~ell~~lk~~----~~~~IVS~~~-~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~ 125 (203)
T TIGR02137 53 HGLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGY 125 (203)
T ss_pred CCCCHHHHHHHHHhCCCCccHHHHHHHHHhC----CeEEEEeCCh-HHHHHHHHHHcCCc--hhhceeeEEecCCeeECe
Confidence 4999999999999999999999999999985 4899999998 78999999998874 68999999988 888886
Q ss_pred ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhhhhC
Q 012437 350 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFG 415 (463)
Q Consensus 350 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~g 415 (463)
.. ..+.+|..+++.+.. . +.++++||||.||++|+..||+||++++++.+++.+.++-
T Consensus 126 ~~---~~~~~K~~~l~~l~~-~----~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~ 183 (203)
T TIGR02137 126 QL---RQKDPKRQSVIAFKS-L----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFP 183 (203)
T ss_pred ee---cCcchHHHHHHHHHh-h----CCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCC
Confidence 43 345679999998853 2 2479999999999999999999999999999998886553
No 19
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.83 E-value=2e-19 Score=171.06 Aligned_cols=132 Identities=12% Similarity=0.098 Sum_probs=108.9
Q ss_pred hhhcCCCCHHHHHHHhh--------cCCCChhHHHHHH-HHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC-CcceEEe
Q 012437 267 SGVLKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-NALNVHA 336 (463)
Q Consensus 267 ~~~f~Gi~~~~i~~~~~--------~i~lr~G~~efl~-~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl-~~~~I~a 336 (463)
..+|+|++.+++.+..+ ...++||+.+.|+ .++++| ++++|||++. ..+++++.+..++ ..++++|
T Consensus 67 ~~~~~g~~~~~l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G---~~v~IvSas~-~~~~~~ia~~~~~~~~~~~i~ 142 (210)
T TIGR01545 67 WACTFGHREAHLQDLEADFVAAFRDKVTAFPLVAERLRQYLESSD---ADIWLITGSP-QPLVEAVYFDSNFIHRLNLIA 142 (210)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCC---CEEEEEcCCc-HHHHHHHHHhccccccCcEEE
Confidence 46789999998876543 2368999999996 667778 9999999986 7789999876543 4468999
Q ss_pred eceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHH
Q 012437 337 NEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 409 (463)
Q Consensus 337 N~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~ 409 (463)
+++++.+| |.+.+++|.|..|.+++++++.. ....++++|||.+|++||..||.++++++++.|++
T Consensus 143 t~le~~~g---g~~~g~~c~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~ 208 (210)
T TIGR01545 143 SQIERGNG---GWVLPLRCLGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQ 208 (210)
T ss_pred EEeEEeCC---ceEcCccCCChHHHHHHHHHhCC----ChhheEEecCCcccHHHHHhCCCcEEECcchHhcc
Confidence 99998654 66777889999999999998842 23567899999999999999999999999988874
No 20
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.82 E-value=3.4e-19 Score=167.55 Aligned_cols=133 Identities=20% Similarity=0.161 Sum_probs=114.7
Q ss_pred hhhcCCCCHHHHHHHhhc-------CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeece
Q 012437 267 SGVLKGINLEDIKKAGER-------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF 339 (463)
Q Consensus 267 ~~~f~Gi~~~~i~~~~~~-------i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l 339 (463)
...|+|++.+++.+.++. ..++||+.++++.++++| .+++|+|++. ..+++.+++..|+ .+++++++
T Consensus 61 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~v~ivS~s~-~~~v~~~~~~lg~--~~~~~~~l 134 (202)
T TIGR01490 61 LDALAGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEG---HTIVLVSASL-TILVKPLARILGI--DNAIGTRL 134 (202)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHcCC--cceEecce
Confidence 356899999999887663 368999999999999998 9999999998 7899999998886 45899999
Q ss_pred EE-ccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChh
Q 012437 340 SF-KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 406 (463)
Q Consensus 340 ~~-~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~ 406 (463)
.+ ++|.++|++.++.+.+..|...+++++++.+.+ ..++++||||.+|++|+..||.++++.+++.
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~ 201 (202)
T TIGR01490 135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVVNPDKK 201 (202)
T ss_pred EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEeCCCCC
Confidence 88 568999998877788899999999998876542 4689999999999999999999999987653
No 21
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.79 E-value=3.2e-18 Score=160.29 Aligned_cols=133 Identities=19% Similarity=0.160 Sum_probs=108.3
Q ss_pred CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEcc-ceeeccc
Q 012437 272 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGEI 350 (463)
Q Consensus 272 Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~-g~~tG~~ 350 (463)
....+++.+..+.+.++||+.++|+.|+++| ++++|+|+++ ..+++.+++.+|+ ..+++|.+.+++ |..+|..
T Consensus 66 ~~~~~~~~~~~~~~~~~~g~~e~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~g~--~~~~~~~~~~~~~g~~~p~~ 139 (201)
T TIGR01491 66 RLRREEVEEIFKEISLRDYAEELVRWLKEKG---LKTAIVSGGI-MCLAKKVAEKLNP--DYVYSNELVFDEKGFIQPDG 139 (201)
T ss_pred CCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHhCC--CeEEEEEEEEcCCCeEecce
Confidence 4467778888888999999999999999999 9999999997 8899999998886 467899988864 5555532
Q ss_pred cccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhh
Q 012437 351 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS 412 (463)
Q Consensus 351 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~ 412 (463)
. ......+|...++++++..+.+ ..+++|||||.+|+++++.||+++++++++.|+++++
T Consensus 140 ~-~~~~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 140 I-VRVTFDNKGEAVERLKRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAK 199 (201)
T ss_pred e-eEEccccHHHHHHHHHHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhcc
Confidence 1 1123446888888888776653 5789999999999999999999999999888887765
No 22
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.78 E-value=5.1e-18 Score=157.02 Aligned_cols=121 Identities=17% Similarity=0.179 Sum_probs=99.9
Q ss_pred CCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEcc-ceee
Q 012437 271 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKE-SIST 347 (463)
Q Consensus 271 ~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~-g~~t 347 (463)
.+++.+++.+..+++.++||+.++++.|+++| ++++|+|++. ..+++.+++++|+... .|++|++.+++ |..+
T Consensus 57 ~~~~~~~~~~~~~~~~l~~g~~~ll~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~ 132 (188)
T TIGR01489 57 SGLKEDEILEVLKSAPIDPGFKEFIAFIKEHG---IDFIVISDGN-DFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHI 132 (188)
T ss_pred cCCCHHHHHHHHHhCCCCccHHHHHHHHHHcC---CcEEEEeCCc-HHHHHHHHHHcCChhheeEEeccCceECCCCcEE
Confidence 35678888888888999999999999999988 9999999885 7889999998887543 79999999975 6666
Q ss_pred ccccc-----cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 348 GEIIE-----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 348 G~~~~-----~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
+.... +...+.+|...+++++... +.+++|||||.+|+++++.|| +++
T Consensus 133 ~~~~~~~~~~~~~~g~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d--~~~ 185 (188)
T TIGR01489 133 VWPHHCHGCCSCPCGCCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSD--VVF 185 (188)
T ss_pred EecCCCCccCcCCCCCCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCC--ccc
Confidence 54432 3456778999999887642 368999999999999999998 555
No 23
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.78 E-value=1.9e-18 Score=159.78 Aligned_cols=188 Identities=16% Similarity=0.200 Sum_probs=134.5
Q ss_pred CCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcccC
Q 012437 161 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 240 (463)
Q Consensus 161 ~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~~~ 240 (463)
.|++++||||.||...||...+.+.+. . ......+.++|.+
T Consensus 12 ~ril~~FDFD~TIid~dSD~wVv~~lp----~------------------~~l~~qL~~t~p~----------------- 52 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNWVVDELP----T------------------TDLFNQLRDTYPK----------------- 52 (256)
T ss_pred CcEEEEEecCceeecCCcchHHHHhcc----c------------------chhHHHHHHhccc-----------------
Confidence 789999999999999999988887651 1 1122233333221
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHH
Q 012437 241 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI 320 (463)
Q Consensus 241 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I 320 (463)
.+|+...+||.+.--=+|++.++|++..+.+++.||+.++++.+++.| ..++.|||+.. ..||
T Consensus 53 --------------~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~lik~~ak~g--~~eliIVSDaN-sfFI 115 (256)
T KOG3120|consen 53 --------------GFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVRLIKSAAKLG--CFELIIVSDAN-SFFI 115 (256)
T ss_pred --------------chHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHHHHHHHHhCC--CceEEEEecCc-hhHH
Confidence 133333334433211268899999999999999999999999999987 25999999985 7999
Q ss_pred HHHHHhcCCCcc--eEEeeceEEcc-ceee--cc---ccc-cCCCCcchHHHHHHHHHHhCC--CCCceEEEEcCCcccH
Q 012437 321 RASFSSAGLNAL--NVHANEFSFKE-SIST--GE---IIE-KVESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDL 389 (463)
Q Consensus 321 ~~~l~~~gl~~~--~I~aN~l~~~~-g~~t--G~---~~~-~~~~g~~K~~~l~~l~~~~~~--~~~~~vIyIGDs~tDl 389 (463)
+.+|+++|+... .|++|...++. |.+. +. -+| .+...+||..++.++....-. ..++++||+|||.||+
T Consensus 116 e~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~ 195 (256)
T KOG3120|consen 116 EEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDF 195 (256)
T ss_pred HHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCc
Confidence 999999987543 79999999986 5332 11 122 356788999999999754311 1245899999999999
Q ss_pred HHhHhcCe-eEEEcCC
Q 012437 390 LCLLEADI-GIVIGSS 404 (463)
Q Consensus 390 ~~l~~Adi-giv~~~~ 404 (463)
|+.+.-.- -+++..+
T Consensus 196 CP~l~Lr~~D~ampRk 211 (256)
T KOG3120|consen 196 CPVLRLRACDVAMPRK 211 (256)
T ss_pred CcchhcccCceecccC
Confidence 99875321 2556443
No 24
>PLN02954 phosphoserine phosphatase
Probab=99.76 E-value=1.2e-17 Score=159.59 Aligned_cols=182 Identities=19% Similarity=0.191 Sum_probs=127.9
Q ss_pred CCCCeEEEcccccceecccchhHHHHHHHhhCCCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHHhhcCCCCcc
Q 012437 159 AGDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKV 238 (463)
Q Consensus 159 ~~~~~~ii~DFD~TiT~~DT~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~i~~~y~~~~~~~~~~~~P~~~~ 238 (463)
|+...+|+||||||||..|++..+++.. + ..+.|..+.+.|+.+.
T Consensus 9 ~~~~k~viFDfDGTL~~~~~~~~~~~~~-----g-----------------~~~~~~~~~~~~~~g~------------- 53 (224)
T PLN02954 9 WRSADAVCFDVDSTVCVDEGIDELAEFC-----G-----------------AGEAVAEWTAKAMGGS------------- 53 (224)
T ss_pred HccCCEEEEeCCCcccchHHHHHHHHHc-----C-----------------ChHHHHHHHHHHHCCC-------------
Confidence 4566788899999999999987777643 1 2345666555544321
Q ss_pred cCCCHHHHHHHHHhhhHHHHHHHHHHHHhhhcCCCCHHHHHHHhhc--CCCChhHHHHHHHHHHcCCCCCcEEEEccccC
Q 012437 239 ENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER--LSLQDGCTTFFQKVVKNENLNANVHVLSYCWC 316 (463)
Q Consensus 239 ~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~--i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s 316 (463)
+++++.... ++ ++++ .+.+++.+..+. ..++||+.++++.++++| ++++|+|++.
T Consensus 54 --~~~~~~~~~-------------~~---~~~~-~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~- 110 (224)
T PLN02954 54 --VPFEEALAA-------------RL---SLFK-PSLSQVEEFLEKRPPRLSPGIPELVKKLRARG---TDVYLVSGGF- 110 (224)
T ss_pred --CCHHHHHHH-------------HH---HHcC-CCHHHHHHHHHHccCCCCccHHHHHHHHHHCC---CEEEEECCCc-
Confidence 222222111 11 1122 255666666554 578999999999999998 9999999997
Q ss_pred HHHHHHHHHhcCCCcceEEeeceEEcc-ceeeccccc-cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHh
Q 012437 317 GDLIRASFSSAGLNALNVHANEFSFKE-SISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 394 (463)
Q Consensus 317 ~~~I~~~l~~~gl~~~~I~aN~l~~~~-g~~tG~~~~-~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~ 394 (463)
..+++.+++.+|++..++++|.+.+++ |..+|.... ..+.+..|...++++....+. .+++|||||.+|+++++.
T Consensus 111 ~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~---~~~i~iGDs~~Di~aa~~ 187 (224)
T PLN02954 111 RQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY---KTMVMIGDGATDLEARKP 187 (224)
T ss_pred HHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC---CceEEEeCCHHHHHhhhc
Confidence 889999999999865578999999864 666664321 223345698988888876542 579999999999999888
Q ss_pred cCeeEEE
Q 012437 395 ADIGIVI 401 (463)
Q Consensus 395 Adigiv~ 401 (463)
++..+++
T Consensus 188 ~~~~~~~ 194 (224)
T PLN02954 188 GGADLFI 194 (224)
T ss_pred CCCCEEE
Confidence 6554444
No 25
>PRK11590 hypothetical protein; Provisional
Probab=99.75 E-value=3.5e-17 Score=155.72 Aligned_cols=129 Identities=12% Similarity=0.057 Sum_probs=105.3
Q ss_pred cCCCCHHHHHHHhh--------cCCCChhHHHHHH-HHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC-CcceEEeece
Q 012437 270 LKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSSAGL-NALNVHANEF 339 (463)
Q Consensus 270 f~Gi~~~~i~~~~~--------~i~lr~G~~efl~-~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl-~~~~I~aN~l 339 (463)
+.|++.+++.+..+ .+.++||+.+.|+ .++++| ++++|+|++. ..+++++++.+|+ ...+++|+++
T Consensus 71 ~~g~~~~~~~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G---~~l~IvSas~-~~~~~~il~~l~~~~~~~~i~t~l 146 (211)
T PRK11590 71 TFGHSEARLQALEADFVRWFRDNVTAFPVVQERLTTYLLSSD---ADVWLITGSP-QPLVEQVYFDTPWLPRVNLIASQM 146 (211)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHccccccCceEEEEE
Confidence 34667666654332 2577999999995 567778 9999999996 7889999988773 2467899999
Q ss_pred EEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHH
Q 012437 340 SFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 409 (463)
Q Consensus 340 ~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~ 409 (463)
++ .+||++.+++|.|..|..++++++.. .....+++|||.+|++||..|+.++++++++.|++
T Consensus 147 ~~---~~tg~~~g~~c~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~ 209 (211)
T PRK11590 147 QR---RYGGWVLTLRCLGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQ 209 (211)
T ss_pred EE---EEccEECCccCCChHHHHHHHHHhCC----CcceEEEecCCcccHHHHHhCCCCEEECccHHhhc
Confidence 87 58899998999999999999998842 23567899999999999999999999999988875
No 26
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.65 E-value=4.3e-15 Score=139.91 Aligned_cols=121 Identities=23% Similarity=0.285 Sum_probs=97.7
Q ss_pred CCCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEcc-ceeecc
Q 012437 271 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGE 349 (463)
Q Consensus 271 ~Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~-g~~tG~ 349 (463)
.|++.+++....+.+.++||+.++++.++++ ++++|+|++. ..+++.++.++|++ .+++|.+.+++ +..+|.
T Consensus 53 ~~~~~~~i~~~~~~~~~~pg~~e~L~~L~~~----~~~~IvS~~~-~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~ 125 (205)
T PRK13582 53 HGLGLADIQEVIATLDPLPGAVEFLDWLRER----FQVVILSDTF-YEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGY 125 (205)
T ss_pred cCCCHHHHHHHHHhCCCCCCHHHHHHHHHhc----CCEEEEeCCc-HHHHHHHHHHcCCc--hhhcceEEECCCCeEECc
Confidence 3679999999999999999999999999864 6899999997 88999999998874 57889988864 555554
Q ss_pred ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChh
Q 012437 350 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 406 (463)
Q Consensus 350 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~ 406 (463)
. ...+.+|...++++... +.+++|||||.+|+++++.|++|++++.+..
T Consensus 126 ~---~~~p~~k~~~l~~~~~~-----~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~ 174 (205)
T PRK13582 126 D---LRQPDGKRQAVKALKSL-----GYRVIAAGDSYNDTTMLGEADAGILFRPPAN 174 (205)
T ss_pred c---ccccchHHHHHHHHHHh-----CCeEEEEeCCHHHHHHHHhCCCCEEECCCHH
Confidence 2 12345787887766542 3679999999999999999999998876543
No 27
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.61 E-value=2.6e-15 Score=139.35 Aligned_cols=100 Identities=25% Similarity=0.326 Sum_probs=78.3
Q ss_pred CCChhHH----HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEcc--ceeeccccccCCCCcc
Q 012437 286 SLQDGCT----TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE--SISTGEIIEKVESPID 359 (463)
Q Consensus 286 ~lr~G~~----efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~--g~~tG~~~~~~~~g~~ 359 (463)
.++||+. ++++.++++| ++++|||++. ..+++++++..|++..++++|++ +++ +..+|++.+..+. +
T Consensus 85 ~~~~~~~~~~~e~i~~~~~~~---~~v~IvS~~~-~~~i~~~~~~~~i~~~~v~~~~~-~~~~~~~~~~~~~~~~~~--~ 157 (192)
T PF12710_consen 85 KLFPGFIPDAMELIRELKDNG---IKVVIVSGSP-DEIIEPIAERLGIDDDNVIGNEL-FDNGGGIFTGRITGSNCG--G 157 (192)
T ss_dssp HHCTTCHTTHHHHHHHHHHTT---SEEEEEEEEE-HHHHHHHHHHTTSSEGGEEEEEE-ECTTCCEEEEEEEEEEES--H
T ss_pred ccCcCchhhHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCCCceEEEEEee-eecccceeeeeECCCCCC--c
Confidence 4555555 9999999998 9999999997 89999999999998888999999 654 3456666544322 7
Q ss_pred hHHHHHHHH--HHhCCCCCceEEEEcCCcccHHHhH
Q 012437 360 KVQAFNNTL--EKYGTDRKNLSVYIGDSVGDLLCLL 393 (463)
Q Consensus 360 K~~~l~~l~--~~~~~~~~~~vIyIGDs~tDl~~l~ 393 (463)
|.++++++. ...+. ....++|||||.+|++||+
T Consensus 158 K~~~l~~~~~~~~~~~-~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDI-DPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTH-TCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CCCeEEEEECCHHHHHHhC
Confidence 999999992 11111 3578999999999999985
No 28
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=99.38 E-value=1.4e-11 Score=130.85 Aligned_cols=122 Identities=13% Similarity=0.093 Sum_probs=94.4
Q ss_pred hhcCCCCHHHHHHHhh----c---CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh-cCCCcceEEeece
Q 012437 268 GVLKGINLEDIKKAGE----R---LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNALNVHANEF 339 (463)
Q Consensus 268 ~~f~Gi~~~~i~~~~~----~---i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~gl~~~~I~aN~l 339 (463)
..|+|++.+++.+.++ + -.+++...+. ++++| ..+|||+.. ..+++++++. +|+ ..|+|+++
T Consensus 85 ~~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~---~~~~g----~~vvVSASp-~~~Vepfa~~~LGi--d~VIgTeL 154 (497)
T PLN02177 85 IAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRV---FNSFG----KRYIITASP-RIMVEPFVKTFLGA--DKVLGTEL 154 (497)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHH---HHhCC----CEEEEECCc-HHHHHHHHHHcCCC--CEEEeccc
Confidence 4589999999977763 2 2366665554 44566 349999987 7789999976 565 56899999
Q ss_pred EE-ccceeecccccc-CCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 340 SF-KESISTGEIIEK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 340 ~~-~~g~~tG~~~~~-~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
+. .+|.+||.+.++ +|.|..|.+++++... .+ ...+++|||.+|++||..||.+++++.+
T Consensus 155 ev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g---~~--~~~~aYgDS~sD~plL~~a~e~y~V~~~ 216 (497)
T PLN02177 155 EVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG---DA--LPDLGLGDRETDHDFMSICKEGYMVPRT 216 (497)
T ss_pred EECcCCEEeeeecCCCCCccHHHHHHHHHHhC---CC--CceEEEECCccHHHHHHhCCccEEeCCC
Confidence 99 489999999887 6789999999985443 11 1238999999999999999999998773
No 29
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription]
Probab=99.34 E-value=5.1e-12 Score=127.23 Aligned_cols=119 Identities=20% Similarity=0.422 Sum_probs=105.6
Q ss_pred CcCCCCccc--ccCCChhHHHHHHHHHHHhc-CCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHHHHHHHHHHhhcc
Q 012437 2 QEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLN 78 (463)
Q Consensus 2 ~~~gi~~~~--~~~~~~~~~~Y~~~l~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y~~~~~~~~~~~~ 78 (463)
+++|+++.+ ...+.|+.++|++|+.++++ |++ .++..||.| |.+...++.+..-
T Consensus 400 e~~Gv~~~d~~~~~~~pa~~Aysry~~d~~~~g~~-------------------~~l~~a~~p----y~~~l~~lk~~~~ 456 (523)
T KOG2598|consen 400 EEYGVSDPDYLSCKKGPALRAYSRYINDTGRRGNW-------------------QELVIALNP----YVFALDKLKDEIT 456 (523)
T ss_pred HHhCCCchhhhhcCccHHHHHHHHHhhhhhcccCh-------------------hhhhhhhch----hhHHHHHHHhhcc
Confidence 578999886 34458999999999999997 544 578999999 8888888887643
Q ss_pred CCCCcccccccccccCChHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 012437 79 ANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLA 145 (463)
Q Consensus 79 ~~~~~~~y~~Wi~~y~s~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~~~~~~ 145 (463)
..++.+|.+|+++|++.++.+.++..+..++...+.+++++.+.+..+|.+++++|..||.++ +.
T Consensus 457 -as~g~vy~~w~e~~~~~~~~~ai~~g~~~l~~i~~~~~pe~~~~l~~i~~~~~~~Et~fw~t~-~~ 521 (523)
T KOG2598|consen 457 -ASEGSVYVEWVETYSSSWYTSAIDEGERLLEHIVETLSPEKLQTLVTIFARVTEFETLFWTTA-LE 521 (523)
T ss_pred -cCCCCceeehhhhccchhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcccc-cc
Confidence 447899999999999999999999999999999999999999999999999999999999998 54
No 30
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.22 E-value=8.5e-10 Score=105.15 Aligned_cols=101 Identities=13% Similarity=0.162 Sum_probs=72.7
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...++||+.++++.++++| ++++|+|++. ...++.+++.+|+... + .. +.++. .+....-+...
T Consensus 91 ~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~--f-~~------~~~~~---~~~~~kp~~~~ 154 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAG---YPLAVVTNKP-TPFVAPLLEALGIADY--F-SV------VIGGD---SLPNKKPDPAP 154 (226)
T ss_pred cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCccC--c-cE------EEcCC---CCCCCCcChHH
Confidence 4689999999999999988 9999999997 7888899988876431 1 11 11111 01111123456
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe-eEEE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 401 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi-giv~ 401 (463)
++.++...+. ...++++|||+.+|+.+++.+|+ .|.+
T Consensus 155 ~~~~~~~~~~-~~~~~i~igD~~~Di~~a~~~g~~~i~v 192 (226)
T PRK13222 155 LLLACEKLGL-DPEEMLFVGDSRNDIQAARAAGCPSVGV 192 (226)
T ss_pred HHHHHHHcCC-ChhheEEECCCHHHHHHHHHCCCcEEEE
Confidence 6667766665 35789999999999999999998 4444
No 31
>PRK08238 hypothetical protein; Validated
Probab=99.21 E-value=2.2e-10 Score=121.49 Aligned_cols=117 Identities=19% Similarity=0.183 Sum_probs=92.8
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
.++++||+.++++.++++| .+++|+|++. ..+++.++++.|+ ...+++.+.. .++.+..|...
T Consensus 70 ~lp~~pga~e~L~~lk~~G---~~v~LaTas~-~~~a~~i~~~lGl-Fd~Vigsd~~------------~~~kg~~K~~~ 132 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAG---RKLVLATASD-ERLAQAVAAHLGL-FDGVFASDGT------------TNLKGAAKAAA 132 (479)
T ss_pred hCCCChhHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCC-CCEEEeCCCc------------cccCCchHHHH
Confidence 4579999999999999999 9999999986 7889999888775 2345554311 12344558777
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhhhhCceeeecCc
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~~ 423 (463)
+.+.... ..++|+|||.+|+++++.|+.++++++++.|++.+++.|++..-+..
T Consensus 133 l~~~l~~------~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~~~~~~~~~~~~ 186 (479)
T PRK08238 133 LVEAFGE------RGFDYAGNSAADLPVWAAARRAIVVGASPGVARAARALGPVERVFPP 186 (479)
T ss_pred HHHHhCc------cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHHHcCCcceecCC
Confidence 6655431 34799999999999999999999999999999999999998776643
No 32
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.15 E-value=3.3e-09 Score=99.43 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=75.4
Q ss_pred HHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeceEEccceeeccccccCC
Q 012437 278 IKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVE 355 (463)
Q Consensus 278 i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~ 355 (463)
+.+....+.+.||+.++|+.|+++| ++++|+|.+. ...++..++..|+.. ..|++. +....++
T Consensus 84 ~~~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Sn~~-~~~~~~~l~~~gl~~~fd~i~~s-----~~~~~~K------ 148 (198)
T TIGR01428 84 LAEAYLRLPPHPDVPAGLRALKERG---YRLAILSNGS-PAMLKSLVKHAGLDDPFDAVLSA-----DAVRAYK------ 148 (198)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHCCChhhhheeEeh-----hhcCCCC------
Confidence 3334456889999999999999998 9999999885 788999998877632 122221 1111111
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee-EEEc
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 402 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig-iv~~ 402 (463)
-+...+...+...+.. ..++++|||+.+|+.+++.+|+. |.+.
T Consensus 149 ---P~~~~~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i~v~ 192 (198)
T TIGR01428 149 ---PAPQVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVN 192 (198)
T ss_pred ---CCHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEEEec
Confidence 1345666666666653 57899999999999999999994 4443
No 33
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.14 E-value=9.7e-10 Score=105.03 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=75.3
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHH
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 362 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 362 (463)
....+.||+.++|+.|+++| ++++|+|++- ...++.+++.+++.. .+... ...+....+ --+..
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~--~f~~~-~~~~~~~~~---------Kp~~~ 152 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQG---LKIGLASASP-LHMLEAVLTMFDLRD--YFDAL-ASAEKLPYS---------KPHPE 152 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCC---CeEEEEeCCc-HHHHHHHHHhCcchh--cccEE-EEcccCCCC---------CCCHH
Confidence 45789999999999999999 9999999985 788999998877633 12211 111111111 12445
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 403 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~ 403 (463)
.++.++...+. ...++++|||+.+|+.+++.||+..+...
T Consensus 153 ~~~~~~~~~~~-~~~~~~~igDs~~Di~aA~~aG~~~i~v~ 192 (222)
T PRK10826 153 VYLNCAAKLGV-DPLTCVALEDSFNGMIAAKAARMRSIVVP 192 (222)
T ss_pred HHHHHHHHcCC-CHHHeEEEcCChhhHHHHHHcCCEEEEec
Confidence 67777777765 35789999999999999999999555434
No 34
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.12 E-value=1.9e-09 Score=101.89 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=72.1
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...++||+.++|+.|+++| ++++|+|++. ...++.++++.|+... ... +.++. .....--+...
T Consensus 83 ~~~~~~g~~~~L~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~---f~~------~~~~~---~~~~~Kp~p~~ 146 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKG---LRLGLVTNKP-TPLARPLLELLGLAKY---FSV------LIGGD---SLAQRKPHPDP 146 (213)
T ss_pred cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCcHhh---CcE------EEecC---CCCCCCCChHH
Confidence 4689999999999999998 9999999985 7889999998876321 100 11111 00111124566
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
+.+.++..+.. ..+++|||||.+|+.+++.||+.++
T Consensus 147 ~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 147 LLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred HHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 77777766653 5789999999999999999998544
No 35
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.11 E-value=2.5e-09 Score=101.56 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=72.3
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHH
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 362 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 362 (463)
+.+.+.||+.++|+.|+++| ++++|+|++. ...++..++.+|+... +.. +.++.- ...+-.|..
T Consensus 79 ~~~~~~~g~~~~l~~L~~~g---~~~~i~S~~~-~~~~~~~l~~~gl~~~--f~~-------i~~~~~---~~~~Kp~p~ 142 (214)
T PRK13288 79 ELVTEYETVYETLKTLKKQG---YKLGIVTTKM-RDTVEMGLKLTGLDEF--FDV-------VITLDD---VEHAKPDPE 142 (214)
T ss_pred hhcccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhc--eeE-------EEecCc---CCCCCCCcH
Confidence 34679999999999999998 9999999986 7889999998886431 110 111110 001112455
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
.+.+++...+. ...+++|||||.+|+.+++.||+.++
T Consensus 143 ~~~~~~~~~~~-~~~~~~~iGDs~~Di~aa~~aG~~~i 179 (214)
T PRK13288 143 PVLKALELLGA-KPEEALMVGDNHHDILAGKNAGTKTA 179 (214)
T ss_pred HHHHHHHHcCC-CHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 66667666654 35789999999999999999998443
No 36
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.10 E-value=2e-09 Score=105.75 Aligned_cols=98 Identities=19% Similarity=0.257 Sum_probs=71.0
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
...++||+.++|+.|+++| ++++|+|.+ +...++.+++++|+... .|++. +....+++ +.
T Consensus 107 ~~~l~pg~~e~L~~L~~~g---~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~ii~~-----~d~~~~KP---------~P 168 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHE---IPIAVASTR-PRRYLERAIEAVGMEGFFSVVLAA-----EDVYRGKP---------DP 168 (260)
T ss_pred CcccCCCHHHHHHHHHHCC---CEEEEEeCc-CHHHHHHHHHHcCCHhhCcEEEec-----ccCCCCCC---------CH
Confidence 4678999999999999999 999999988 47889999998886431 12221 11111121 33
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
..+...+...+. ...+++|||||.+|+.+++.||+.++
T Consensus 169 e~~~~a~~~l~~-~p~~~l~IgDs~~Di~aA~~aG~~~i 206 (260)
T PLN03243 169 EMFMYAAERLGF-IPERCIVFGNSNSSVEAAHDGCMKCV 206 (260)
T ss_pred HHHHHHHHHhCC-ChHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 455556665555 35789999999999999999999433
No 37
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.08 E-value=6.9e-09 Score=99.87 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=70.4
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...+.||+.++++.|+++| +++.|+|.+ +..+++..++.+|+... ...+...+....++ -+...
T Consensus 93 ~~~~~pg~~~~L~~L~~~g---~~l~i~Tn~-~~~~~~~~l~~~~l~~~---f~~i~~~~~~~~~K---------P~p~~ 156 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAG---CVWGIVTNK-PEYLARLILPQLGWEQR---CAVLIGGDTLAERK---------PHPLP 156 (229)
T ss_pred cCeeCCCHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCchhc---ccEEEecCcCCCCC---------CCHHH
Confidence 5789999999999999998 999999987 47788888888775331 00000011111111 23455
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
+...++..+. .+.++++|||+.+|+.+++.||+..+
T Consensus 157 ~~~~~~~l~~-~p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 157 LLVAAERIGV-APTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred HHHHHHHhCC-ChhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 6666666665 35789999999999999999998544
No 38
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.07 E-value=2.3e-09 Score=102.10 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=72.4
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...+.||+.++|+.|+++| +++.|+|++. ...++..++.+|+.... +...+...+....++ -+...
T Consensus 85 ~~~l~~G~~~~L~~L~~~g---~~~~ivT~~~-~~~~~~~l~~~~l~~~~-~f~~i~~~~~~~~~K---------P~p~~ 150 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSG---IKVALTTGFD-RDTAERLLEKLGWTVGD-DVDAVVCPSDVAAGR---------PAPDL 150 (220)
T ss_pred CCccCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHHhhhhhhc-cCCEEEcCCcCCCCC---------CCHHH
Confidence 4689999999999999999 9999999885 78899999887764100 111111111111111 24466
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigi 399 (463)
+...+.+.+...+.+++||||+.+|+.+++.||+.+
T Consensus 151 ~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 151 ILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred HHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 666666665432478999999999999999999976
No 39
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.06 E-value=4.3e-09 Score=99.25 Aligned_cols=99 Identities=17% Similarity=0.229 Sum_probs=73.3
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcch
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
..+.+.||+.++|+.|+++| ++++|+|.+. ...++..++..|+... .+++ .+.. + .+--+
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g---~~~~i~Sn~~-~~~~~~~l~~~~l~~~f~~i~~-----~~~~--~-------~~KP~ 133 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADG---VGTAIATGKS-GPRARSLLEALGLLPLFDHVIG-----SDEV--P-------RPKPA 133 (205)
T ss_pred cccccCCCHHHHHHHHHHCC---CeEEEEeCCc-hHHHHHHHHHcCChhheeeEEe-----cCcC--C-------CCCCC
Confidence 46899999999999999998 9999999985 7888888888876431 1111 0111 0 11124
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
...+.+.+++.+.+ ..+++||||+.+|+.+++.+|+.++
T Consensus 134 ~~~~~~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 134 PDIVREALRLLDVP-PEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred hHHHHHHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEE
Confidence 56777777776653 5789999999999999999999544
No 40
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.05 E-value=1.2e-09 Score=94.15 Aligned_cols=111 Identities=13% Similarity=0.036 Sum_probs=75.8
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC--cceEEeeceEEcc-ceeecccc-ccCCCC
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHANEFSFKE-SISTGEII-EKVESP 357 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~--~~~I~aN~l~~~~-g~~tG~~~-~~~~~g 357 (463)
.....+++|+.++++.|+++| ++++|+|+++ ...++.+++..++. ...+++....... +...+... ..+..+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g---~~i~ivS~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKG---IKLALATNKS-RREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCC---CeEEEEeCch-HHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccC
Confidence 446789999999999999998 9999999997 88999999887752 2234443322211 10111111 123334
Q ss_pred cchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe
Q 012437 358 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 397 (463)
Q Consensus 358 ~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi 397 (463)
..|...++.+....+. ....+++|||+.+|++++..++.
T Consensus 96 ~~~~~~~~~~~~~~~~-~~~~~~~igD~~~d~~~~~~~g~ 134 (139)
T cd01427 96 KPNPDKLLAALKLLGV-DPEEVLMVGDSLNDIEMAKAAGG 134 (139)
T ss_pred CCCHHHHHHHHHHcCC-ChhhEEEeCCCHHHHHHHHHcCC
Confidence 4566666666665544 25789999999999999999765
No 41
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.04 E-value=4.2e-09 Score=104.29 Aligned_cols=98 Identities=19% Similarity=0.267 Sum_probs=73.3
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchH
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
...+.+.||+.++|+.|+++| +++.|+|++. ...+...++.+|+... + .. +.++... ..|.
T Consensus 138 ~~~~~l~pg~~e~L~~L~~~g---i~laIvSn~~-~~~~~~~L~~~gl~~~--F-~~------vi~~~~~------~~k~ 198 (273)
T PRK13225 138 LPALQLFPGVADLLAQLRSRS---LCLGILSSNS-RQNIEAFLQRQGLRSL--F-SV------VQAGTPI------LSKR 198 (273)
T ss_pred cccCCcCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhh--e-EE------EEecCCC------CCCH
Confidence 345789999999999999998 9999999985 8899999998886431 1 11 1222111 1255
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeE
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigi 399 (463)
..+..++...+.. ..+++||||+.+|+.+++.||+.+
T Consensus 199 ~~~~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~~ 235 (273)
T PRK13225 199 RALSQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLIA 235 (273)
T ss_pred HHHHHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCeE
Confidence 6677777666543 578999999999999999999843
No 42
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.01 E-value=5.3e-09 Score=102.04 Aligned_cols=100 Identities=14% Similarity=0.073 Sum_probs=70.6
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc---eEEeeceEEccceeeccccccCCCCcc
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL---NVHANEFSFKESISTGEIIEKVESPID 359 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~---~I~aN~l~~~~g~~tG~~~~~~~~g~~ 359 (463)
+...+.||+.++|+.|+++| +++.|+|++. ...++.+++.+|+... .|++ .+.+..++ -
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g---~~l~IvT~~~-~~~~~~~l~~~gl~~~f~d~ii~-----~~~~~~~K---------P 157 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARG---IKIGSTTGYT-REMMDVVAPEAALQGYRPDYNVT-----TDDVPAGR---------P 157 (253)
T ss_pred hcCccCCCHHHHHHHHHHCC---CeEEEECCCc-HHHHHHHHHHHHhcCCCCceEEc-----cccCCCCC---------C
Confidence 35789999999999999998 9999999885 7889999988775431 1111 11111111 1
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
+.+.+...+...+.....+++|||||.+|+.+++.||+..+
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i 198 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTV 198 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEE
Confidence 33445555555554224689999999999999999998433
No 43
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.00 E-value=1.1e-08 Score=105.07 Aligned_cols=101 Identities=13% Similarity=0.157 Sum_probs=72.3
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...+.||+.++|+.|+++| +++.|+|.+- ...++..++.+|+.. +...+...+....++ -+...
T Consensus 214 ~~~l~pGa~ElL~~Lk~~G---iklaIaSn~~-~~~~~~~L~~lgL~~---yFd~Iv~sddv~~~K---------P~Pei 277 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYK---IPMALVSTRP-RKTLENAIGSIGIRG---FFSVIVAAEDVYRGK---------PDPEM 277 (381)
T ss_pred CCCcCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCHH---HceEEEecCcCCCCC---------CCHHH
Confidence 4689999999999999999 9999999885 789999999888643 111111111111111 13455
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
+.......+. ...+++||||+.+|+.+++.||+.++.
T Consensus 278 fl~A~~~lgl-~Peecl~IGDS~~DIeAAk~AGm~~Ig 314 (381)
T PLN02575 278 FIYAAQLLNF-IPERCIVFGNSNQTVEAAHDARMKCVA 314 (381)
T ss_pred HHHHHHHcCC-CcccEEEEcCCHHHHHHHHHcCCEEEE
Confidence 5556665554 357899999999999999999995443
No 44
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.98 E-value=1.5e-08 Score=97.36 Aligned_cols=98 Identities=15% Similarity=0.223 Sum_probs=71.5
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeceEEccceeeccccccCCCCcc
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 359 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 359 (463)
...+.+.||+.++|+.|+++| ++++|+|++ +...++..++.+|+.. ..|++.. ....++ -
T Consensus 89 ~~~~~~~~g~~e~L~~Lk~~g---~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~iv~s~-----~~~~~K---------P 150 (224)
T PRK14988 89 GPRAVLREDTVPFLEALKASG---KRRILLTNA-HPHNLAVKLEHTGLDAHLDLLLSTH-----TFGYPK---------E 150 (224)
T ss_pred hccCCcCCCHHHHHHHHHhCC---CeEEEEeCc-CHHHHHHHHHHCCcHHHCCEEEEee-----eCCCCC---------C
Confidence 456899999999999999999 999999988 4788888888777532 1222211 111111 1
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 398 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig 398 (463)
+...+....+..+. .+.+++||||+.+|+.+++.||+.
T Consensus 151 ~p~~~~~~~~~~~~-~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 151 DQRLWQAVAEHTGL-KAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred CHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHcCCe
Confidence 34556666666655 357899999999999999999995
No 45
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.97 E-value=1.5e-08 Score=99.87 Aligned_cols=98 Identities=10% Similarity=0.056 Sum_probs=69.4
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc---eEEeeceEEccceeeccccccCCCCcc
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL---NVHANEFSFKESISTGEIIEKVESPID 359 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~---~I~aN~l~~~~g~~tG~~~~~~~~g~~ 359 (463)
+.+.+.||+.++|+.|+++| ++++|+|++. ...++.+++..++... .|++. +....++ -
T Consensus 98 ~~~~~~pg~~elL~~L~~~g---~~l~I~T~~~-~~~~~~~l~~~~l~~~~~d~i~~~-----~~~~~~K---------P 159 (267)
T PRK13478 98 DYATPIPGVLEVIAALRARG---IKIGSTTGYT-REMMDVVVPLAAAQGYRPDHVVTT-----DDVPAGR---------P 159 (267)
T ss_pred hcCCCCCCHHHHHHHHHHCC---CEEEEEcCCc-HHHHHHHHHHHhhcCCCceEEEcC-----CcCCCCC---------C
Confidence 35789999999999999999 9999999885 7788888886654221 11111 1111111 1
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 398 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig 398 (463)
+...+...+...+.....+++|||||.+|+.+++.||+.
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 345566666666643246899999999999999999984
No 46
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.96 E-value=1.4e-08 Score=96.53 Aligned_cols=100 Identities=14% Similarity=0.206 Sum_probs=70.9
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
.+.+.||+.++|+.|+++| ++++|+|.+. ...+...++..|+... .|++. +. .|. .--+.
T Consensus 92 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~-----~~--~~~-------~KP~~ 153 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESG---YRLGIITDGL-PVKQWEKLERLGVRDFFDAVITS-----EE--EGV-------EKPHP 153 (221)
T ss_pred hCCCCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHhCChHHhccEEEEe-----cc--CCC-------CCCCH
Confidence 4789999999999999998 9999999986 6677888888776331 12221 11 110 11133
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCe-eEEEc
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 402 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adi-giv~~ 402 (463)
+.+...++..+.. ..+++|||||. +|+.+++.||+ .|.+.
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 5566666666553 57899999998 99999999998 44443
No 47
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=98.95 E-value=4.3e-08 Score=92.11 Aligned_cols=95 Identities=18% Similarity=0.192 Sum_probs=64.9
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKVQ 362 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 362 (463)
..+.||+.++|+.|+++| ++++|+|.+- . .++..++..|+... .|++. +. .|. .--+..
T Consensus 104 ~~~~~g~~~~l~~L~~~g---~~~~i~Sn~~-~-~~~~~l~~~~l~~~fd~i~~s-----~~--~~~-------~KP~~~ 164 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERG---LILGVISNFD-S-RLRGLLEALGLLEYFDFVVTS-----YE--VGA-------EKPDPK 164 (203)
T ss_pred ceeCcCHHHHHHHHHHCC---CEEEEEeCCc-h-hHHHHHHHCCcHHhcceEEee-----cc--cCC-------CCCCHH
Confidence 478999999999999998 9999999753 3 45777877775321 12211 11 110 001235
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCeeE
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGI 399 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adigi 399 (463)
.+...+...+. .+.++++|||+. +|+.+++.||+..
T Consensus 165 ~~~~~~~~~~~-~~~~~~~IgD~~~~Di~~A~~aG~~~ 201 (203)
T TIGR02252 165 IFQEALERAGI-SPEEALHIGDSLRNDYQGARAAGWRA 201 (203)
T ss_pred HHHHHHHHcCC-ChhHEEEECCCchHHHHHHHHcCCee
Confidence 56666666554 357899999997 8999999999743
No 48
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.93 E-value=3.2e-08 Score=97.87 Aligned_cols=98 Identities=12% Similarity=0.141 Sum_probs=70.2
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...++||+.++|+.|+++| ++++|+|++- ...++..+...++.. +.+.+ .++.- +...--+...
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g---~~l~ivTn~~-~~~~~~~l~~~~i~~---~f~~i------~~~d~---~~~~Kp~p~~ 162 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQG---VEMALITNKP-ERFVAPLLDQMKIGR---YFRWI------IGGDT---LPQKKPDPAA 162 (272)
T ss_pred CCccCCCHHHHHHHHHHCC---CeEEEEECCc-HHHHHHHHHHcCcHh---hCeEE------EecCC---CCCCCCCcHH
Confidence 4678999999999999988 9999999874 778888888777533 11111 11110 0111124456
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 398 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig 398 (463)
+..++...+.+ ..++++|||+.+|+.+++.||+.
T Consensus 163 ~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 163 LLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred HHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCe
Confidence 66777666653 57899999999999999999983
No 49
>PRK09449 dUMP phosphatase; Provisional
Probab=98.93 E-value=3.2e-08 Score=94.49 Aligned_cols=101 Identities=16% Similarity=0.333 Sum_probs=69.3
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
.+.+.||+.++|+.|+ ++ ++++|+|.+. ...++..+++.|+... ...+...+....++ -+...
T Consensus 93 ~~~~~~g~~~~L~~L~-~~---~~~~i~Tn~~-~~~~~~~l~~~~l~~~---fd~v~~~~~~~~~K---------P~p~~ 155 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GK---VKMGIITNGF-TELQQVRLERTGLRDY---FDLLVISEQVGVAK---------PDVAI 155 (224)
T ss_pred cCccCccHHHHHHHHH-hC---CeEEEEeCCc-HHHHHHHHHhCChHHH---cCEEEEECccCCCC---------CCHHH
Confidence 4789999999999999 56 8999999986 7788888888775321 11111111110011 13456
Q ss_pred HHHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCee-EEE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI 401 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adig-iv~ 401 (463)
+...+...+.....+++||||+. +|+.+++.||+. |.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~ 195 (224)
T PRK09449 156 FDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWL 195 (224)
T ss_pred HHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEE
Confidence 66666666543336899999998 799999999994 444
No 50
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.93 E-value=9.4e-09 Score=100.25 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=71.3
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
.+.+.||+.++|+.|+++| ++++|+|.+. ...++..++++|+... .|++. +....+++ +.
T Consensus 106 ~~~l~pgv~e~L~~L~~~g---~~l~I~Tn~~-~~~~~~~l~~~gl~~~Fd~iv~~-----~~~~~~KP---------~p 167 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRG---LKRAAVTNAP-RENAELMISLLGLSDFFQAVIIG-----SECEHAKP---------HP 167 (248)
T ss_pred cCCcCccHHHHHHHHHHcC---CeEEEEeCCC-HHHHHHHHHHcCChhhCcEEEec-----CcCCCCCC---------Ch
Confidence 5789999999999999998 9999999985 7899999998886431 12221 11111221 23
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
..+...+...+.+ +.+++||||+.+|+.+++.||+.++
T Consensus 168 ~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 168 DPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred HHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 4455555555542 5789999999999999999999544
No 51
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.92 E-value=2.2e-08 Score=92.38 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=66.6
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
.+.+.||+.++|+.|+++| ++++|+|++ ..++..++..|+... .+++. +.. + ....+.
T Consensus 86 ~~~~~~g~~~~l~~l~~~g---~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~-----~~~--~-------~~kp~~ 145 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKG---IAVGLGSSS---KNADRILAKLGLTDYFDAIVDA-----DEV--K-------EGKPHP 145 (185)
T ss_pred CCCCCcCHHHHHHHHHHcC---CeEEEEeCc---hhHHHHHHHcChHHHCCEeeeh-----hhC--C-------CCCCCh
Confidence 4789999999999999998 999999976 457888887775321 12211 000 0 011123
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
..+...++..+. ...+++||||+.+|+.+++.||+..+
T Consensus 146 ~~~~~~~~~~~~-~~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 146 ETFLLAAELLGV-SPNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred HHHHHHHHHcCC-CHHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 445555555554 35789999999999999999998543
No 52
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.91 E-value=3.8e-08 Score=94.23 Aligned_cols=94 Identities=16% Similarity=0.232 Sum_probs=69.7
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKVQ 362 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 362 (463)
..+.||+.+.|..+++.| +++.|+|.+- ...++.+++++|+... .|++ .++....+ -...
T Consensus 88 ~~~~~gv~e~L~~L~~~g---~~l~i~T~k~-~~~~~~~l~~~gl~~~F~~i~g-----~~~~~~~K---------P~P~ 149 (220)
T COG0546 88 SRLFPGVKELLAALKSAG---YKLGIVTNKP-ERELDILLKALGLADYFDVIVG-----GDDVPPPK---------PDPE 149 (220)
T ss_pred CccCCCHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHHHhCCccccceEEc-----CCCCCCCC---------cCHH
Confidence 589999999999999999 9999999985 7899999999886442 1222 01111111 1234
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 397 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi 397 (463)
.+..++...+.+ +.+++||||+.+|+.|++.|++
T Consensus 150 ~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~ 183 (220)
T COG0546 150 PLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV 183 (220)
T ss_pred HHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCC
Confidence 555666666664 4689999999999999999996
No 53
>PRK11587 putative phosphatase; Provisional
Probab=98.90 E-value=2.1e-08 Score=95.70 Aligned_cols=101 Identities=18% Similarity=0.175 Sum_probs=68.3
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc-eEEeeceEEccceeeccccccCCCCcchH
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
+.+.+.||+.++|+.|+++| ++++|+|.+. .......+...++... .|++. +....+++ +.
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g---~~~~ivTn~~-~~~~~~~l~~~~l~~~~~i~~~-----~~~~~~KP---------~p 141 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLG---IPWAIVTSGS-VPVASARHKAAGLPAPEVFVTA-----ERVKRGKP---------EP 141 (218)
T ss_pred cCceeCcCHHHHHHHHHHcC---CcEEEEcCCC-chHHHHHHHhcCCCCccEEEEH-----HHhcCCCC---------Cc
Confidence 46789999999999999999 9999999985 5566666776665321 11111 11111111 22
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee-EEEc
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 402 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig-iv~~ 402 (463)
..+.......+. .+.+++|||||.+|+.+++.||+. |.+.
T Consensus 142 ~~~~~~~~~~g~-~p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 142 DAYLLGAQLLGL-APQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred HHHHHHHHHcCC-CcccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 344444444554 357899999999999999999994 4453
No 54
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=98.87 E-value=3.1e-08 Score=91.40 Aligned_cols=97 Identities=13% Similarity=0.111 Sum_probs=65.1
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...+.||+.++|+.|+++| +++.|+|.+.. ....++..|+... .......+.. + ..--+.+.
T Consensus 85 ~~~~~pg~~~~L~~L~~~g---~~~~i~s~~~~---~~~~l~~~~l~~~---f~~~~~~~~~--~-------~~kp~p~~ 146 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNN---IKIALASASKN---APTVLEKLGLIDY---FDAIVDPAEI--K-------KGKPDPEI 146 (185)
T ss_pred CcccCccHHHHHHHHHHCC---CeEEEEeCCcc---HHHHHHhcCcHhh---CcEEEehhhc--C-------CCCCChHH
Confidence 3578999999999999998 99999998653 3456777665321 1111111111 1 11124455
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigi 399 (463)
+...++..+. ...+++||||+.+|+.+++.+|+..
T Consensus 147 ~~~~~~~~~~-~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 147 FLAAAEGLGV-SPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHcCC-CHHHeEEEecCHHHHHHHHHcCCEE
Confidence 6666666554 3578999999999999999999843
No 55
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=98.86 E-value=4.9e-08 Score=91.75 Aligned_cols=111 Identities=13% Similarity=0.153 Sum_probs=71.7
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc-CCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
..++||+.++|+.++++| ++++|+|.+. ...+..++... ++.. +...+...+....++ -+...
T Consensus 83 ~~~~~g~~e~L~~l~~~g---~~~~i~Sn~~-~~~~~~~~~~~~~l~~---~fd~v~~s~~~~~~K---------P~p~~ 146 (199)
T PRK09456 83 VALRPEVIAIMHKLREQG---HRVVVLSNTN-RLHTTFWPEEYPEVRA---AADHIYLSQDLGMRK---------PEARI 146 (199)
T ss_pred hccCHHHHHHHHHHHhCC---CcEEEEcCCc-hhhHHHHHhhchhHHH---hcCEEEEecccCCCC---------CCHHH
Confidence 468999999999999998 9999999875 45554444322 2211 111111111111111 14456
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe-eEEEcCChhHHHHhh
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRVGS 412 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi-giv~~~~~~L~~~~~ 412 (463)
+...++..+. .+.+++||||+..|+.+++.+|+ .|.+.+...+.++.+
T Consensus 147 ~~~~~~~~~~-~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 147 YQHVLQAEGF-SAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred HHHHHHHcCC-ChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence 6666666655 35789999999999999999999 556655556665543
No 56
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.85 E-value=1.7e-08 Score=90.62 Aligned_cols=93 Identities=12% Similarity=0.125 Sum_probs=64.9
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
.....||+.++++.|+++| ++++|+|.+. ...+...++.+ +.. +.+.+...+... + --+...
T Consensus 62 ~~~~~~g~~e~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~-l~~---~f~~i~~~~~~~-~---------Kp~~~~ 123 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAG---IKLGIISNGS-LRAQKLLLRKH-LGD---YFDLILGSDEFG-A---------KPEPEI 123 (154)
T ss_pred hheeccCHHHHHHHHHHCc---CeEEEEeCCc-hHHHHHHHHHH-HHh---cCcEEEecCCCC-C---------CcCHHH
Confidence 4566799999999999988 9999999997 67777777754 221 111111111111 1 124566
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcC
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 396 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Ad 396 (463)
+..++.+.+.+ . +++||||+..|+.+++.||
T Consensus 124 ~~~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 77777776654 4 8999999999999999885
No 57
>PLN02940 riboflavin kinase
Probab=98.83 E-value=4.5e-08 Score=101.45 Aligned_cols=100 Identities=12% Similarity=0.170 Sum_probs=71.0
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHH-hcCCCc--ceEEeeceEEccceeeccccccCCCCcc
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS-SAGLNA--LNVHANEFSFKESISTGEIIEKVESPID 359 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~-~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 359 (463)
+.+.+.||+.++|+.|+++| +++.|+|.+. ...++..+. ..|+.. ..|++- +.+..+ --
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g---~~l~IvTn~~-~~~~~~~l~~~~gl~~~Fd~ii~~-----d~v~~~---------KP 151 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHG---VPMALASNSP-RANIEAKISCHQGWKESFSVIVGG-----DEVEKG---------KP 151 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCC---CcEEEEeCCc-HHHHHHHHHhccChHhhCCEEEeh-----hhcCCC---------CC
Confidence 46789999999999999998 9999999985 777777776 555422 122221 111111 12
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
+.+.+.+.++..+. ...++++||||.+|+.+++.||+.++.
T Consensus 152 ~p~~~~~a~~~lgv-~p~~~l~VGDs~~Di~aA~~aGi~~I~ 192 (382)
T PLN02940 152 SPDIFLEAAKRLNV-EPSNCLVIEDSLPGVMAGKAAGMEVIA 192 (382)
T ss_pred CHHHHHHHHHHcCC-ChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 44666666666665 357899999999999999999995443
No 58
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=98.82 E-value=1.4e-07 Score=85.09 Aligned_cols=98 Identities=20% Similarity=0.320 Sum_probs=73.8
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeceEEccceeeccccccCCCCcch
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
....+.||+.++|+.++++| ++++|+|.+ +...++..++.+|+.. ..|++.. . .| ..-.+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~---~~~~i~Sn~-~~~~~~~~l~~~~~~~~f~~i~~~~-----~--~~-------~~Kp~ 135 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKG---IPLVIVSNG-SRERIERVLERLGLDDYFDEIISSD-----D--VG-------SRKPD 135 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTT---SEEEEEESS-EHHHHHHHHHHTTHGGGCSEEEEGG-----G--SS-------SSTTS
T ss_pred hccchhhhhhhhhhhccccc---ceeEEeecC-Ccccccccccccccccccccccccc-----h--hh-------hhhhH
Confidence 56899999999999999888 999999988 5888999999887542 1222211 0 01 11124
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeE
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigi 399 (463)
...++++++..+. .+.++++|||+..|+.+++.+|+..
T Consensus 136 ~~~~~~~~~~~~~-~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 136 PDAYRRALEKLGI-PPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHHTS-SGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHcCC-CcceEEEEeCCHHHHHHHHHcCCeE
Confidence 4677777777766 3689999999999999999999843
No 59
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=98.74 E-value=8.8e-07 Score=88.34 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=69.1
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 364 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 364 (463)
+.+.||+.++|+.|+++| ++++|+|.+. ...+..+++..+... +.+.+.+ .++.- +...-.+...+
T Consensus 143 ~~l~pGv~elL~~L~~~g---~~l~IvTn~~-~~~~~~~l~~~~~~~---~~~~~~~----v~~~~---~~~~KP~p~~~ 208 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAG---IKVAVCSTSN-EKAVSKIVNTLLGPE---RAQGLDV----FAGDD---VPKKKPDPDIY 208 (286)
T ss_pred CCchhhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhcccc---ccCceEE----Eeccc---cCCCCCCHHHH
Confidence 689999999999999998 9999999874 788888877542111 1111111 01110 00111234566
Q ss_pred HHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 365 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 365 ~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
...+...+.+ +.++++|||+.+|+.+++.||+.++.
T Consensus 209 ~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~ 244 (286)
T PLN02779 209 NLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIV 244 (286)
T ss_pred HHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEE
Confidence 6666666553 57899999999999999999996554
No 60
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=98.70 E-value=5.4e-07 Score=85.58 Aligned_cols=98 Identities=17% Similarity=0.240 Sum_probs=68.6
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
...++||+.++|+.++++ ++++|+|.++ ...++..++.+|+... .|++. +.. | ..--+.
T Consensus 95 ~~~~~~g~~~~L~~l~~~----~~~~i~Sn~~-~~~~~~~l~~~~l~~~fd~i~~~-----~~~--~-------~~KP~~ 155 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK----FRLYIVTNGV-RETQYKRLRKSGLFPFFDDIFVS-----EDA--G-------IQKPDK 155 (224)
T ss_pred cCeeCccHHHHHHHHHhc----CcEEEEeCCc-hHHHHHHHHHCCcHhhcCEEEEc-----Ccc--C-------CCCCCH
Confidence 468999999999999874 6999999987 7888888888876431 12211 100 1 011234
Q ss_pred HHHHHHHHHh-CCCCCceEEEEcCCc-ccHHHhHhcCe-eEEE
Q 012437 362 QAFNNTLEKY-GTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 401 (463)
Q Consensus 362 ~~l~~l~~~~-~~~~~~~vIyIGDs~-tDl~~l~~Adi-giv~ 401 (463)
..+...+... +. ...++++|||+. +|+.+++.+|+ .|.+
T Consensus 156 ~~~~~~~~~~~~~-~~~~~v~igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 156 EIFNYALERMPKF-SKEEVLMIGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred HHHHHHHHHhcCC-CchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence 5556666555 44 357899999998 79999999998 4444
No 61
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.69 E-value=6e-07 Score=83.10 Aligned_cols=99 Identities=11% Similarity=0.192 Sum_probs=66.9
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
.+.+.||+.++|+.|+ .+++|+|.+. ...+...++..|+... .|++.. .. +. .....--+.
T Consensus 82 ~~~~~~g~~~~L~~L~------~~~~i~Tn~~-~~~~~~~l~~~gl~~~fd~i~~~~-----~~--~~---~~~~~KP~p 144 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP------GRKIIFTNGD-RAHARRALNRLGIEDCFDGIFCFD-----TA--NP---DYLLPKPSP 144 (184)
T ss_pred hCCCCHHHHHHHHhCC------CCEEEEeCCC-HHHHHHHHHHcCcHhhhCeEEEee-----cc--cC---ccCCCCCCH
Confidence 4678999999999986 3689999986 7889999998876331 222211 00 10 000011134
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
+.+...++..+. .+.++++|||+..|+.+++.+|+..+
T Consensus 145 ~~~~~~~~~~~~-~~~~~l~vgD~~~di~aA~~~G~~~i 182 (184)
T TIGR01993 145 QAYEKALREAGV-DPERAIFFDDSARNIAAAKALGMKTV 182 (184)
T ss_pred HHHHHHHHHhCC-CccceEEEeCCHHHHHHHHHcCCEEe
Confidence 566666666665 35789999999999999999998543
No 62
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.66 E-value=8.6e-07 Score=83.12 Aligned_cols=92 Identities=11% Similarity=0.112 Sum_probs=62.1
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
.+.++..++|+.|+++| ++++|+|++. ...++.+++..|+.. .+. .....+.... + -+...+.
T Consensus 106 ~~~~~~~~~L~~l~~~g---~~~~i~T~~~-~~~~~~~l~~~gl~~--~f~-~~~~~~~~~~-K---------P~p~~~~ 168 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAP---KGMAVVTGRP-RKDAAKFLTTHGLEI--LFP-VQIWMEDCPP-K---------PNPEPLI 168 (197)
T ss_pred ccccCHHHHHHHHHHcC---CcEEEECCCC-HHHHHHHHHHcCchh--hCC-EEEeecCCCC-C---------cCHHHHH
Confidence 34455699999999988 9999999985 788999999888643 111 1111111100 1 1344455
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhc
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 395 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A 395 (463)
..++..+.+ ..++++|||+.+|+.+++.|
T Consensus 169 ~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 169 LAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 555555543 46899999999999998865
No 63
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.66 E-value=6.8e-07 Score=94.97 Aligned_cols=97 Identities=19% Similarity=0.244 Sum_probs=68.6
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...++||+.++|+.|+++| +++.|+|++- ..+++..++.+|+.. .+. .+...+.. .+ ..|...
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g---~~l~IvS~~~-~~~~~~~l~~~~l~~--~f~-~i~~~d~v-~~---------~~kP~~ 390 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENN---CSIYIASNGL-TEYLRAIVSYYDLDQ--WVT-ETFSIEQI-NS---------LNKSDL 390 (459)
T ss_pred CCCcCCCHHHHHHHHHHCC---CeEEEEeCCc-hHHHHHHHHHCCcHh--hcc-eeEecCCC-CC---------CCCcHH
Confidence 4689999999999999998 9999999985 889999999887633 111 11111111 00 123345
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
+...+...+ ..++++||||.+|+.+++.||+.++
T Consensus 391 ~~~al~~l~---~~~~v~VGDs~~Di~aAk~AG~~~I 424 (459)
T PRK06698 391 VKSILNKYD---IKEAAVVGDRLSDINAAKDNGLIAI 424 (459)
T ss_pred HHHHHHhcC---cceEEEEeCCHHHHHHHHHCCCeEE
Confidence 555554443 3679999999999999999998443
No 64
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.66 E-value=6.1e-07 Score=82.25 Aligned_cols=95 Identities=15% Similarity=0.184 Sum_probs=64.7
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeceEEccceeeccccccCCCCcchHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 362 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 362 (463)
+.+.||+.++|+.++++| ++++|+|.+. ... ...+.+.|+.. ..|++. +....++ -+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g---~~~~i~Tn~~-~~~-~~~~~~~~l~~~f~~i~~~-----~~~~~~K---------P~~~ 144 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARG---KKLALLTNSP-RDH-AVLVQELGLRDLFDVVIFS-----GDVGRGK---------PDPD 144 (183)
T ss_pred CccCcCHHHHHHHHHHCC---CeEEEEeCCc-hHH-HHHHHhcCCHHHCCEEEEc-----CCCCCCC---------CCHH
Confidence 689999999999999998 9999999986 444 44444456532 112211 1110111 1245
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeE
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigi 399 (463)
.++..++..+.+ ..++++|||+..|+.+++.+|+..
T Consensus 145 ~~~~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~~ 180 (183)
T TIGR01509 145 IYLLALKKLGLK-PEECLFVDDSPAGIEAAKAAGMHT 180 (183)
T ss_pred HHHHHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCEE
Confidence 556666665553 578999999999999999999843
No 65
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.65 E-value=7.9e-07 Score=84.72 Aligned_cols=99 Identities=13% Similarity=0.153 Sum_probs=68.5
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
.+.+.||+.++|+.| + ++++|+|.+- ...++..++.+|+... |++.+.++.-. ...--+.+.
T Consensus 86 ~~~~~~gv~~~L~~L---~---~~~~ivTn~~-~~~~~~~l~~~~l~~~--------F~~~v~~~~~~---~~~KP~p~~ 147 (221)
T PRK10563 86 ELEPIAGANALLESI---T---VPMCVVSNGP-VSKMQHSLGKTGMLHY--------FPDKLFSGYDI---QRWKPDPAL 147 (221)
T ss_pred cCCcCCCHHHHHHHc---C---CCEEEEeCCc-HHHHHHHHHhcChHHh--------CcceEeeHHhc---CCCCCChHH
Confidence 578999999999998 3 7999999884 7889999988776321 10111111100 011124466
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
+...+...+. ...++++|||+.+|+.+++.||+.++.
T Consensus 148 ~~~a~~~~~~-~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNV-NVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCC-CHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 6666666665 357899999999999999999996553
No 66
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.65 E-value=5.1e-07 Score=84.55 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=61.0
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHH
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 362 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 362 (463)
+...+.||+.++|+.|++.+ +++++|.+- ...-...++.+++.. .+-. .| +.+.++... ..|.+
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~----~~~i~Tn~~-~~~~~~~~~~~~l~~--~f~~--~f-~~i~~~~~~------~~kp~ 134 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDY----DFVAVTALG-DSIDALLNRQFNLNA--LFPG--AF-SEVLMCGHD------ESKEK 134 (197)
T ss_pred HhccCCCCHHHHHHHHHhcC----CEEEEeCCc-cchhHHHHhhCCHHH--hCCC--cc-cEEEEeccC------cccHH
Confidence 45779999999999998754 577777643 333332444444321 0000 11 111111111 12556
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCcccHHHhHhc--CeeEEE
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA--DIGIVI 401 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A--digiv~ 401 (463)
.+...+.+.+ ...++||||+.+|+.+++.| |+.++.
T Consensus 135 ~~~~a~~~~~---~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 135 LFIKAKEKYG---DRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred HHHHHHHHhC---CCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 6676776655 35799999999999999999 996554
No 67
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.65 E-value=4.1e-07 Score=84.25 Aligned_cols=96 Identities=13% Similarity=0.049 Sum_probs=66.5
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
.+.+.|| .++|..+++ + ++++|+|++. ...++..++++|+... .|++ .+.... .--+.
T Consensus 86 ~~~~~~~-~e~L~~L~~-~---~~l~I~T~~~-~~~~~~~l~~~~l~~~fd~i~~-----~~~~~~---------~KP~p 145 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHG-R---RPMAVGTGSE-SAIAEALLAHLGLRRYFDAVVA-----ADDVQH---------HKPAP 145 (188)
T ss_pred cCCCccH-HHHHHHHHh-C---CCEEEEcCCc-hHHHHHHHHhCCcHhHceEEEe-----hhhccC---------CCCCh
Confidence 4567786 589999875 3 6899999986 7888999998886431 1222 111111 11244
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
+.+.......+.. ..+++||||+.+|+.++..||+.++
T Consensus 146 ~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 146 DTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMDAV 183 (188)
T ss_pred HHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCEEE
Confidence 5666666666553 5789999999999999999998433
No 68
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.62 E-value=4.9e-07 Score=87.55 Aligned_cols=92 Identities=12% Similarity=0.080 Sum_probs=60.8
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEcccc---CHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcch
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW---CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~---s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
...+.+++.+||+.++++| ++++|||+.. ....++.+++.+|++.. + ... +++..... .. .+|
T Consensus 112 ~s~p~~~a~elL~~l~~~G---~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f--~~i-----~~~d~~~~-~K-p~~ 177 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRG---DAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--N--PVI-----FAGDKPGQ-YQ-YTK 177 (237)
T ss_pred CCcchhHHHHHHHHHHHCC---CEEEEEeCCCCCcCHHHHHHHHHHhCCchh--e--eEE-----ECCCCCCC-CC-CCH
Confidence 3466777999999999999 9999999862 14578888888887542 1 111 22211110 00 124
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 398 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig 398 (463)
..+ +.+. ..++||||+.+|+.+++.|++.
T Consensus 178 ~~~----l~~~-----~i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 178 TQW----IQDK-----NIRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred HHH----HHhC-----CCeEEEeCCHHHHHHHHHCCCC
Confidence 322 2222 2379999999999999999983
No 69
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=98.61 E-value=6.7e-07 Score=84.60 Aligned_cols=107 Identities=11% Similarity=0.083 Sum_probs=65.5
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH-HHHHHHhcCCCc--ceEEeeceEEccceeeccccccCCCCcch
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL-IRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~-I~~~l~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
.+.+.||+.++|+.|+++| ++++|+|.++.... ....+...++.. ..|++. +....+++ .
T Consensus 92 ~~~~~~~~~~~L~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s-----~~~~~~KP---------~ 154 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKG---FKTACITNNFPTDHSAEEALLPGDIMALFDAVVES-----CLEGLRKP---------D 154 (211)
T ss_pred ccccChhHHHHHHHHHHCC---CeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEe-----eecCCCCC---------C
Confidence 5789999999999999998 99999998753211 111122222211 112211 00000111 1
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe-eEEEcCChhHH
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLR 408 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi-giv~~~~~~L~ 408 (463)
...+...++..+. .+.+++||||+..|+.+++.||+ .|.+.....+.
T Consensus 155 p~~~~~~~~~~g~-~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~ 202 (211)
T TIGR02247 155 PRIYQLMLERLGV-APEECVFLDDLGSNLKPAAALGITTIKVSDEEQAI 202 (211)
T ss_pred HHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 3455555555554 35789999999999999999999 55565544443
No 70
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.57 E-value=3e-07 Score=101.10 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=84.6
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
++|||..+.++.|++.| +++.++|+.. ....+.+.++.|++ +++++ +++.+|.+.++
T Consensus 446 ~~Rp~a~eaI~~l~~~G---i~v~miTGD~-~~ta~~iA~~lGI~--~v~a~-----------------~~PedK~~~v~ 502 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMG---IKTIMITGDN-RLTAAAIAAEAGVD--DFIAE-----------------ATPEDKIALIR 502 (675)
T ss_pred cchhHHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCC--EEEcC-----------------CCHHHHHHHHH
Confidence 89999999999999999 9999999974 77888888888863 33331 34578999999
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhhhhCceeeecCchh
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGL 425 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~~~~ 425 (463)
++.++ +..+.++|||.||.++|..||+||++++...+.+-+ . +++=+++.+
T Consensus 503 ~lq~~-----g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akea---a-divLldd~~ 553 (675)
T TIGR01497 503 QEQAE-----GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEA---A-NMVDLDSDP 553 (675)
T ss_pred HHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHh---C-CEEECCCCH
Confidence 98763 356889999999999999999999998754443222 1 555555433
No 71
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.52 E-value=5.1e-07 Score=98.23 Aligned_cols=94 Identities=24% Similarity=0.328 Sum_probs=77.4
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 364 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 364 (463)
-.+|||+.++++.|+++| ++++|+|++. ....+.+++++|++ ++++. .+.+|.+.+
T Consensus 404 d~l~~~a~e~i~~Lk~~G---i~v~ilSgd~-~~~a~~ia~~lgi~---~~~~~-----------------~p~~K~~~v 459 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRG---IEPVMLTGDN-RKTAKAVAKELGIN---VRAEV-----------------LPDDKAALI 459 (562)
T ss_pred ccccHHHHHHHHHHHHcC---CeEEEEcCCC-HHHHHHHHHHcCCc---EEccC-----------------ChHHHHHHH
Confidence 479999999999999999 9999999985 78899999988863 33311 234798888
Q ss_pred HHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhH
Q 012437 365 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 407 (463)
Q Consensus 365 ~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L 407 (463)
+++..+ +.+++|||||.||.++++.||+||.++....+
T Consensus 460 ~~l~~~-----~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~ 497 (562)
T TIGR01511 460 KELQEK-----GRVVAMVGDGINDAPALAQADVGIAIGAGTDV 497 (562)
T ss_pred HHHHHc-----CCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH
Confidence 887752 46899999999999999999999999865433
No 72
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.52 E-value=2e-06 Score=99.77 Aligned_cols=99 Identities=14% Similarity=0.107 Sum_probs=69.5
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
.+.||+.++|+.|+++| +++.|+|.+. ...++..+++.|+.. -+.+.+...+....++ -+.+.+.
T Consensus 161 ~~~pG~~elL~~Lk~~G---~~l~IvSn~~-~~~~~~~L~~~gl~~--~~Fd~iv~~~~~~~~K---------P~Pe~~~ 225 (1057)
T PLN02919 161 IGFPGALELITQCKNKG---LKVAVASSAD-RIKVDANLAAAGLPL--SMFDAIVSADAFENLK---------PAPDIFL 225 (1057)
T ss_pred ccCccHHHHHHHHHhCC---CeEEEEeCCc-HHHHHHHHHHcCCCh--hHCCEEEECcccccCC---------CCHHHHH
Confidence 47999999999999999 9999999886 778888898887631 0111111111111111 1345555
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
..++..+. .+.+++||||+..|+.+++.||+.++
T Consensus 226 ~a~~~lgv-~p~e~v~IgDs~~Di~AA~~aGm~~I 259 (1057)
T PLN02919 226 AAAKILGV-PTSECVVIEDALAGVQAARAAGMRCI 259 (1057)
T ss_pred HHHHHcCc-CcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 56666655 35789999999999999999999433
No 73
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=98.52 E-value=5.6e-07 Score=99.11 Aligned_cols=94 Identities=20% Similarity=0.255 Sum_probs=77.3
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
++|||.++.++.|++.| ++++++|+-- ..-.+.+.++.|++ ++++ -+++.+|.+.++
T Consensus 445 ~~R~~~~eai~~Lr~~G---I~vvMiTGDn-~~TA~aIA~elGId--~v~A-----------------~~~PedK~~iV~ 501 (679)
T PRK01122 445 IVKPGIKERFAELRKMG---IKTVMITGDN-PLTAAAIAAEAGVD--DFLA-----------------EATPEDKLALIR 501 (679)
T ss_pred cCchhHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCc--EEEc-----------------cCCHHHHHHHHH
Confidence 78999999999999999 9999999874 67788888888873 2333 134668999999
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhH
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 407 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L 407 (463)
+++++ +..+.++|||.||-++|+.||+||+|++...+
T Consensus 502 ~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdv 538 (679)
T PRK01122 502 QEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQA 538 (679)
T ss_pred HHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHH
Confidence 98863 35678999999999999999999999875433
No 74
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=98.49 E-value=7.3e-07 Score=98.13 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=83.2
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
++|||.++.++.|++.| +++.++|+- +..-.+.+.++.|++ ++++ -+++.+|.++++
T Consensus 441 p~R~~a~e~I~~Lr~~G---I~vvMiTGD-n~~TA~aIA~elGI~--~v~A-----------------~~~PedK~~iV~ 497 (673)
T PRK14010 441 VIKDGLVERFRELREMG---IETVMCTGD-NELTAATIAKEAGVD--RFVA-----------------ECKPEDKINVIR 497 (673)
T ss_pred CCcHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCc--eEEc-----------------CCCHHHHHHHHH
Confidence 89999999999999999 999999986 367778888888863 2333 135678999999
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhhhhCceeeecCchh
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGL 425 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~~~~ 425 (463)
+++++ +..+.++|||.||-++|+.||+||+|+....++ ++- -+++=+++++
T Consensus 498 ~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA---keA-ADiVLldd~l 548 (673)
T PRK14010 498 EEQAK-----GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSA---KEA-ANLIDLDSNP 548 (673)
T ss_pred HHHhC-----CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHH---HHh-CCEEEcCCCH
Confidence 98763 356779999999999999999999998654333 222 2556555433
No 75
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.44 E-value=5.5e-07 Score=84.57 Aligned_cols=88 Identities=19% Similarity=0.168 Sum_probs=68.5
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcch--HH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK--VQ 362 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~~ 362 (463)
.++|||+.++|+.|++.| +++.|+|+.. ......+.+..|+....|+++.. ..+..| .+
T Consensus 126 d~~~~~~~~~l~~L~~~G---i~~~i~TGD~-~~~a~~~~~~lgi~~~~v~a~~~---------------~kP~~k~~~~ 186 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAG---IKVAILTGDN-ESTASAIAKQLGIFDSIVFARVI---------------GKPEPKIFLR 186 (215)
T ss_dssp EEBHTTHHHHHHHHHHTT---EEEEEEESSE-HHHHHHHHHHTTSCSEEEEESHE---------------TTTHHHHHHH
T ss_pred CcchhhhhhhhhhhhccC---cceeeeeccc-ccccccccccccccccccccccc---------------ccccchhHHH
Confidence 489999999999999999 9999999874 77888888888875444555432 234467 56
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcC
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 396 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Ad 396 (463)
+++++.. ....+++||||.||++|++.||
T Consensus 187 ~i~~l~~-----~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 187 IIKELQV-----KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHTC-----TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHHHhc-----CCCEEEEEccCHHHHHHHHhCc
Confidence 6665442 1358999999999999999997
No 76
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=98.44 E-value=1.4e-05 Score=77.44 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=60.2
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcch
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
..+.+.||+.++|+.|++ + ++++|+|.|- .. ++..|+... .|++. + ... ..--+
T Consensus 110 ~~~~~~~gv~~~L~~L~~-~---~~l~i~Tn~~-~~-----~~~~gl~~~fd~i~~~-----~-----~~~----~~KP~ 165 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAK-K---WPLVAITNGN-AQ-----PELFGLGDYFEFVLRA-----G-----PHG----RSKPF 165 (238)
T ss_pred hcCCCCccHHHHHHHHHc-C---CCEEEEECCC-ch-----HHHCCcHHhhceeEec-----c-----cCC----cCCCc
Confidence 357899999999999985 3 7899999874 33 244554221 12211 1 110 01124
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCC-cccHHHhHhcCeeEE
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIV 400 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~~Adigiv 400 (463)
...+...+...+. ...++++|||+ ..|+.+++.||+..+
T Consensus 166 p~~~~~a~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 166 SDMYHLAAEKLNV-PIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHHHcCC-ChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 4566666655554 35789999999 599999999998433
No 77
>PLN02811 hydrolase
Probab=98.42 E-value=2.8e-06 Score=81.19 Aligned_cols=103 Identities=9% Similarity=0.121 Sum_probs=62.7
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeceEEccceeeccccccCCCCcch
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
....+.||+.++|+.|+++| +++.|+|++....+....++..++.. ..|++.. +..+-.+++ +
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g---~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~---~~~~~~~KP---------~ 139 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKG---IPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGD---DPEVKQGKP---------A 139 (220)
T ss_pred hhCCCCccHHHHHHHHHHCC---CcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECC---hhhccCCCC---------C
Confidence 45788999999999999998 99999998763333322332222211 1222211 001111111 2
Q ss_pred HHHHHHHHHHhC---CCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 361 VQAFNNTLEKYG---TDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 361 ~~~l~~l~~~~~---~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
...+...+.+.+ . ...+++||||+..|+.+++.||+.++.
T Consensus 140 p~~~~~a~~~~~~~~~-~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 140 PDIFLAAARRFEDGPV-DPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred cHHHHHHHHHhCCCCC-CccceEEEeccHhhHHHHHHCCCeEEE
Confidence 234444444443 2 357899999999999999999995443
No 78
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.42 E-value=2.2e-06 Score=83.04 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=61.4
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccc---cCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcch
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC---WCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g---~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
...+.||+.++|+.++++| +++++||+. -....++.+++.+|++..+.+ .+. .+|.-. .-.+|
T Consensus 112 ~a~p~~Ga~elL~~L~~~G---~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f--~vi-----l~gd~~----~K~~K 177 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRG---DSIYFITGRTATKTETVSKTLADDFHIPADNMN--PVI-----FAGDKP----GQYTK 177 (237)
T ss_pred cCcchHHHHHHHHHHHHCC---CeEEEEeCCCCcccHHHHHHHHHHcCCCcccce--eEE-----EcCCCC----CCCCH
Confidence 3678999999999999999 999999983 124567777777887422211 111 222211 11245
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 397 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi 397 (463)
...++ +. ..+|||||+.+|+.+++.||+
T Consensus 178 ~~~l~----~~-----~i~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 178 TQWLK----KK-----NIRIFYGDSDNDITAAREAGA 205 (237)
T ss_pred HHHHH----hc-----CCeEEEcCCHHHHHHHHHcCC
Confidence 54433 22 248999999999999999999
No 79
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.42 E-value=1e-06 Score=97.25 Aligned_cols=92 Identities=22% Similarity=0.250 Sum_probs=77.8
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
.+||+..+.++.|++.| ++++++|+- +....+.+.++.|+ .+++++ ..+.+|.+.++
T Consensus 537 ~~R~~a~~aI~~L~~~G---i~~~mLTGD-n~~~A~~iA~~lGI--d~v~Ae-----------------llPedK~~~V~ 593 (713)
T COG2217 537 ELRPDAKEAIAALKALG---IKVVMLTGD-NRRTAEAIAKELGI--DEVRAE-----------------LLPEDKAEIVR 593 (713)
T ss_pred CCChhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCh--Hhhecc-----------------CCcHHHHHHHH
Confidence 89999999999999999 999999987 47788888888886 334442 23568999999
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
++..+ +..+.+||||.||-++|..||+||+|+...
T Consensus 594 ~l~~~-----g~~VamVGDGINDAPALA~AdVGiAmG~Gt 628 (713)
T COG2217 594 ELQAE-----GRKVAMVGDGINDAPALAAADVGIAMGSGT 628 (713)
T ss_pred HHHhc-----CCEEEEEeCCchhHHHHhhcCeeEeecCCc
Confidence 99853 467899999999999999999999998853
No 80
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.38 E-value=2.3e-06 Score=82.10 Aligned_cols=104 Identities=15% Similarity=0.139 Sum_probs=71.8
Q ss_pred HhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcch
Q 012437 281 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 281 ~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
..+.+.+.||+.+++..|+++| +++.+.|++. ...++.+|...|+.. +.....+.+.+..|++.|.+ =
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~---i~~avaS~s~-~~~~~~~L~~~gl~~---~f~~~v~~~dv~~~KP~Pd~-----y 148 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARG---IPLAVASSSP-RRAAERVLARLGLLD---YFDVIVTADDVARGKPAPDI-----Y 148 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcC---CcEEEecCCh-HHHHHHHHHHccChh---hcchhccHHHHhcCCCCCHH-----H
Confidence 3456899999999999999998 9999999874 678899998887533 22222222333444444321 1
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
.... +..+. .+.++|.|.||.+.+.+.+.||.-++.
T Consensus 149 L~Aa----~~Lgv-~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 149 LLAA----ERLGV-DPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred HHHH----HHcCC-ChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 1222 22222 357899999999999999999995444
No 81
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=98.37 E-value=1.1e-05 Score=84.90 Aligned_cols=114 Identities=10% Similarity=0.028 Sum_probs=85.5
Q ss_pred hhhcCCCCHHHHHHHhhcC-------CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh-cCCCcceEEeec
Q 012437 267 SGVLKGINLEDIKKAGERL-------SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-AGLNALNVHANE 338 (463)
Q Consensus 267 ~~~f~Gi~~~~i~~~~~~i-------~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~-~gl~~~~I~aN~ 338 (463)
.-.|.|++.+++++.++.+ .+++. .++..+.+| +++|+|+.. ..+++++++. .|. ..|++.+
T Consensus 70 ~v~f~Gl~~~die~vaRavlpkf~~~dv~~e---~~~~~~~~g----~~vVVTAsP-rvmVEpFake~LG~--D~VvGTE 139 (498)
T PLN02499 70 FVATAGVHESEIESVARAVLPKFYMDDVDME---AWKVFSSCD----KRVVVTRMP-RVMVERFAKEHLRA--DEVIGSE 139 (498)
T ss_pred HHHhCCCCHHHHHHHHHHHhhHHHHhhCCHH---HHHHHHcCC----eEEEEeCCH-HHHHHHHHHHhcCC--ceEEeee
Confidence 5678999999999887753 23333 555556554 899999987 7889999997 554 5688999
Q ss_pred eEEcc-ceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcC
Q 012437 339 FSFKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 396 (463)
Q Consensus 339 l~~~~-g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Ad 396 (463)
+++.+ |..||.+.+.++ +..|.+++++...+ ....+-+||+.+|-..+..+.
T Consensus 140 L~v~~~G~~TG~~~G~n~-~ek~~~rl~~~~g~-----~~~~vg~~~~~~~~~f~~~ck 192 (498)
T PLN02499 140 LVVNRFGFATGFIRGTDV-DQSVANRVANLFVD-----ERPQLGLGRISASSSFLSLCK 192 (498)
T ss_pred EEEeeccEEEEEEecCcc-HHHHHHHHHHHhCc-----cCceecccCCcccchhhhhCc
Confidence 99985 999999886555 43447777766542 234788999999998888776
No 82
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=98.34 E-value=2.5e-06 Score=97.19 Aligned_cols=110 Identities=17% Similarity=0.232 Sum_probs=78.7
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEee-ceEE-ccceeec-----cccccCCCCc
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHAN-EFSF-KESISTG-----EIIEKVESPI 358 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN-~l~~-~~g~~tG-----~~~~~~~~g~ 358 (463)
++||+.++.++.|++.| +++.++|+-- ......+.++.|+...+++.. ++.- ++..... .+.. -.++.
T Consensus 515 p~R~~~~~aI~~l~~aG---I~vvmiTGD~-~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA-r~~Pe 589 (867)
T TIGR01524 515 PPKESTKEAIAALFKNG---INVKVLTGDN-EIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFA-RLTPM 589 (867)
T ss_pred CCchhHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE-ECCHH
Confidence 89999999999999999 9999999863 666777888888753223221 1110 0000000 0011 14678
Q ss_pred chHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 359 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
+|.++++.+++. +..+.++|||.||.++|+.||+||+++...
T Consensus 590 ~K~~iV~~lq~~-----G~vVam~GDGvNDapALk~AdVGIAmg~gt 631 (867)
T TIGR01524 590 QKSRIIGLLKKA-----GHTVGFLGDGINDAPALRKADVGISVDTAA 631 (867)
T ss_pred HHHHHHHHHHhC-----CCEEEEECCCcccHHHHHhCCEEEEeCCcc
Confidence 999999988763 356779999999999999999999998644
No 83
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.34 E-value=1.9e-06 Score=93.29 Aligned_cols=90 Identities=22% Similarity=0.275 Sum_probs=75.1
Q ss_pred CCCChhHHHHHHHHHHcCCCCC-cEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNA-NVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~-~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
-.+|||+.+.++.|+++| + ++.|+|+.. ....+.++++.|++. ++++ ..+.+|...
T Consensus 361 d~l~~~~~e~i~~L~~~G---i~~v~vvTgd~-~~~a~~i~~~lgi~~--~f~~-----------------~~p~~K~~~ 417 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALG---IEKVVMLTGDR-RAVAERVARELGIDE--VHAE-----------------LLPEDKLEI 417 (536)
T ss_pred ccchHHHHHHHHHHHHcC---CCcEEEEcCCC-HHHHHHHHHHcCChh--hhhc-----------------cCcHHHHHH
Confidence 489999999999999999 9 999999985 788999999988732 2221 123478998
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEc
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 402 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~ 402 (463)
++++..+ ..+++|||||.||+++++.||+||.++
T Consensus 418 i~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g 451 (536)
T TIGR01512 418 VKELREK-----YGPVAMVGDGINDAPALAAADVGIAMG 451 (536)
T ss_pred HHHHHhc-----CCEEEEEeCCHHHHHHHHhCCEEEEeC
Confidence 8888753 368999999999999999999999998
No 84
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=98.29 E-value=1.7e-05 Score=74.66 Aligned_cols=127 Identities=20% Similarity=0.315 Sum_probs=96.3
Q ss_pred CCCCHHHHHHHhhc-CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEcc-ce---
Q 012437 271 KGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SI--- 345 (463)
Q Consensus 271 ~Gi~~~~i~~~~~~-i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~-g~--- 345 (463)
.|++.++++++.+. ..|-||+.+.++.+++. ++-+|+|.+. ..+++......|++--+++|.++.+|+ .+
T Consensus 67 hGVt~~dlrr~sE~sa~lvPgA~etm~~l~~~----~tp~v~STSY-~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~Pee 141 (315)
T COG4030 67 HGVTNRDLRRISELSAKLVPGAEETMATLQER----WTPVVISTSY-TQYLRRTASMIGVPRGELHGTEVDLDSIAVPEE 141 (315)
T ss_pred hcCcHHHHHHHHHhhcccCCChHHHHHHHhcc----CCceEEeccH-HHHHHHHHHhcCCCccccccccccCccccCChH
Confidence 68999999999886 89999999999999876 6778899888 789999988888877788999988873 10
Q ss_pred --------------eecc------------cc----c------cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccH
Q 012437 346 --------------STGE------------II----E------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDL 389 (463)
Q Consensus 346 --------------~tG~------------~~----~------~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl 389 (463)
..|. +. + +...|..|.++++.+..-.+. +..+++||||++|.
T Consensus 142 eR~E~L~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~--d~sa~~VGDSItDv 219 (315)
T COG4030 142 EREELLSIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGI--DFSAVVVGDSITDV 219 (315)
T ss_pred HHHHHHHhcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCC--CcceeEecCcccch
Confidence 1121 11 0 234566788888877765444 24589999999999
Q ss_pred HHhHhcC----eeEEEcCC
Q 012437 390 LCLLEAD----IGIVIGSS 404 (463)
Q Consensus 390 ~~l~~Ad----igiv~~~~ 404 (463)
.|++.+. +.|+|+.+
T Consensus 220 ~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 220 KMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHhhccCceEEEecCC
Confidence 9999873 44666555
No 85
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=98.29 E-value=3.5e-06 Score=96.25 Aligned_cols=111 Identities=15% Similarity=0.202 Sum_probs=79.3
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEe-eceEE-cccee-----eccccccCCCC
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSF-KESIS-----TGEIIEKVESP 357 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~a-N~l~~-~~g~~-----tG~~~~~~~~g 357 (463)
=++||+..+.++.|++.| +++.++|+- +..-...+.++.|+....+++ .++.- ++... .-.+.. -.++
T Consensus 549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~sP 623 (902)
T PRK10517 549 DPPKETTAPALKALKASG---VTVKILTGD-SELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RLTP 623 (902)
T ss_pred CcchhhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-EcCH
Confidence 389999999999999999 999999986 366677888888875333322 11110 00000 000111 1467
Q ss_pred cchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 358 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 358 ~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
.+|.++++.+++. +..|.++|||.||.++|+.|||||+++...
T Consensus 624 e~K~~IV~~Lq~~-----G~vVam~GDGvNDaPALk~ADVGIAmg~gt 666 (902)
T PRK10517 624 MHKERIVTLLKRE-----GHVVGFMGDGINDAPALRAADIGISVDGAV 666 (902)
T ss_pred HHHHHHHHHHHHC-----CCEEEEECCCcchHHHHHhCCEEEEeCCcC
Confidence 8999999998863 356779999999999999999999998653
No 86
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=98.29 E-value=3.1e-06 Score=96.75 Aligned_cols=111 Identities=16% Similarity=0.233 Sum_probs=78.5
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEe-eceEE-ccceeec-----cccccCCCCc
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSF-KESISTG-----EIIEKVESPI 358 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~a-N~l~~-~~g~~tG-----~~~~~~~~g~ 358 (463)
++||+..+.++.|++.| +++.++|+- +..-...+.++.|+....+++ .++.- ++..... .+.. -+++.
T Consensus 550 p~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfA-r~sPe 624 (903)
T PRK15122 550 PPKESAAPAIAALRENG---VAVKVLTGD-NPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFA-KLTPL 624 (903)
T ss_pred ccHHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEE-EeCHH
Confidence 89999999999999999 999999986 366677888888874322221 11110 0000000 0111 14677
Q ss_pred chHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChh
Q 012437 359 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 406 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~ 406 (463)
+|.++++.+++. +..|.++|||.||.++|+.||+||+++..+.
T Consensus 625 ~K~~iV~~Lq~~-----G~vVamtGDGvNDaPALk~ADVGIAmg~gtd 667 (903)
T PRK15122 625 QKSRVLKALQAN-----GHTVGFLGDGINDAPALRDADVGISVDSGAD 667 (903)
T ss_pred HHHHHHHHHHhC-----CCEEEEECCCchhHHHHHhCCEEEEeCcccH
Confidence 999999998863 3567799999999999999999999986443
No 87
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.27 E-value=6.5e-06 Score=74.45 Aligned_cols=85 Identities=19% Similarity=0.320 Sum_probs=68.4
Q ss_pred HHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCC
Q 012437 294 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 373 (463)
Q Consensus 294 fl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~ 373 (463)
.++.|+++| +.++|+|++. ...+..+++++|+.. .+. +. ..|...+.+++...+.
T Consensus 36 ~i~~Lk~~G---~~i~IvTn~~-~~~~~~~l~~~gi~~--~~~-----------~~--------~~k~~~~~~~~~~~~~ 90 (154)
T TIGR01670 36 GIRCALKSG---IEVAIITGRK-AKLVEDRCKTLGITH--LYQ-----------GQ--------SNKLIAFSDILEKLAL 90 (154)
T ss_pred HHHHHHHCC---CEEEEEECCC-CHHHHHHHHHcCCCE--EEe-----------cc--------cchHHHHHHHHHHcCC
Confidence 688899999 9999999986 678888899888643 221 10 2478888888887765
Q ss_pred CCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 374 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 374 ~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
...+++|||||.+|++|++.|++++++.+.
T Consensus 91 -~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~ 120 (154)
T TIGR01670 91 -APENVAYIGDDLIDWPVMEKVGLSVAVADA 120 (154)
T ss_pred -CHHHEEEECCCHHHHHHHHHCCCeEecCCc
Confidence 357899999999999999999999999764
No 88
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.24 E-value=4.5e-06 Score=93.69 Aligned_cols=92 Identities=21% Similarity=0.220 Sum_probs=75.8
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 364 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 364 (463)
-++|||+.+.++.|++.| ++++++|+-- ....+.+.++.|++ .+++ ..+.+|...+
T Consensus 567 d~~r~~a~~~i~~L~~~g---i~~~llTGd~-~~~a~~ia~~lgi~---~~~~-----------------~~p~~K~~~v 622 (741)
T PRK11033 567 DTLRADARQAISELKALG---IKGVMLTGDN-PRAAAAIAGELGID---FRAG-----------------LLPEDKVKAV 622 (741)
T ss_pred cCCchhHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCC---eecC-----------------CCHHHHHHHH
Confidence 389999999999999999 9999999874 77888999988863 2221 2345899999
Q ss_pred HHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChh
Q 012437 365 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 406 (463)
Q Consensus 365 ~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~ 406 (463)
+++.+ ...+.|||||.||.++|+.||+||+++..+.
T Consensus 623 ~~l~~------~~~v~mvGDgiNDapAl~~A~vgia~g~~~~ 658 (741)
T PRK11033 623 TELNQ------HAPLAMVGDGINDAPAMKAASIGIAMGSGTD 658 (741)
T ss_pred HHHhc------CCCEEEEECCHHhHHHHHhCCeeEEecCCCH
Confidence 98764 2479999999999999999999999986543
No 89
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=98.23 E-value=4.2e-06 Score=94.09 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=78.5
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEe-eceEEccc--eeec-c---------ccc
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSFKES--ISTG-E---------IIE 352 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~a-N~l~~~~g--~~tG-~---------~~~ 352 (463)
++||+..+.++.|++.| +++.++|+- +....+.+.++.|+... ++. +++.-.+. ..+. + +..
T Consensus 442 p~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA 516 (755)
T TIGR01647 442 PPRHDTKETIERARHLG---VEVKMVTGD-HLAIAKETARRLGLGTN-IYTADVLLKGDNRDDLPSGELGEMVEDADGFA 516 (755)
T ss_pred CChhhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCC-CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE
Confidence 89999999999999999 999999987 36778888888887431 221 11110000 0000 0 111
Q ss_pred cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 353 KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 353 ~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
-.++.+|.++++.+.+. +..+.++|||.||.++|+.||+||+++...
T Consensus 517 -r~~Pe~K~~iV~~lq~~-----G~~VamvGDGvNDapAL~~AdVGIAm~~gt 563 (755)
T TIGR01647 517 -EVFPEHKYEIVEILQKR-----GHLVGMTGDGVNDAPALKKADVGIAVAGAT 563 (755)
T ss_pred -ecCHHHHHHHHHHHHhc-----CCEEEEEcCCcccHHHHHhCCeeEEecCCc
Confidence 14567999999988763 456789999999999999999999998644
No 90
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.20 E-value=8.2e-06 Score=88.79 Aligned_cols=97 Identities=22% Similarity=0.310 Sum_probs=76.6
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 364 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 364 (463)
-.++||+.+.++.|+++| .+++.|+|+.- ....+.++++.|++ +++++ ..+.+|.+.+
T Consensus 383 d~~~~g~~e~l~~L~~~g--~i~v~ivTgd~-~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~~v 440 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAG--GIKLVMLTGDN-RSAAEAVAAELGID--EVHAE-----------------LLPEDKLAIV 440 (556)
T ss_pred ccchHhHHHHHHHHHHcC--CCeEEEEeCCC-HHHHHHHHHHhCCC--eeecc-----------------CCHHHHHHHH
Confidence 589999999999998763 17899999985 78899999988873 22321 1235788888
Q ss_pred HHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHH
Q 012437 365 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 408 (463)
Q Consensus 365 ~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~ 408 (463)
+++... +.+++|||||.||.++++.||+||.++..+.+.
T Consensus 441 ~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 479 (556)
T TIGR01525 441 KELQEE-----GGVVAMVGDGINDAPALAAADVGIAMGAGSDVA 479 (556)
T ss_pred HHHHHc-----CCEEEEEECChhHHHHHhhCCEeEEeCCCCHHH
Confidence 887752 358999999999999999999999998644443
No 91
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=98.19 E-value=7.8e-06 Score=94.16 Aligned_cols=107 Identities=21% Similarity=0.222 Sum_probs=75.8
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEE-eeceEEc-cc----ee-eccccccCCC
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVH-ANEFSFK-ES----IS-TGEIIEKVES 356 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~-aN~l~~~-~g----~~-tG~~~~~~~~ 356 (463)
++||+..+.++.|++.| +++.++|+- +..-...+.++.|+... .++ .+++.-- +. .. .-.+.. -++
T Consensus 579 plr~~~~~aI~~l~~aG---I~v~miTGD-~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfa-r~s 653 (941)
T TIGR01517 579 PLRPGVREAVQECQRAG---ITVRMVTGD-NIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLA-RSS 653 (941)
T ss_pred CCchhHHHHHHHHHHCC---CEEEEECCC-ChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEE-ECC
Confidence 89999999999999999 999999986 36667777788886321 111 1111100 00 00 000111 246
Q ss_pred CcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEc
Q 012437 357 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 402 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~ 402 (463)
+.+|.++++.+++. +..+.++|||.||.+||+.|||||+++
T Consensus 654 Pe~K~~iV~~lq~~-----g~vVam~GDGvNDapALk~AdVGIAmg 694 (941)
T TIGR01517 654 PLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSMG 694 (941)
T ss_pred HHHHHHHHHHHHHC-----CCEEEEECCCCchHHHHHhCCcceecC
Confidence 77999999988763 356789999999999999999999998
No 92
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.17 E-value=8.7e-06 Score=74.89 Aligned_cols=91 Identities=14% Similarity=0.283 Sum_probs=68.9
Q ss_pred HHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCC
Q 012437 295 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 374 (463)
Q Consensus 295 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~ 374 (463)
++.|+++| +++.|+|++. ...++..++.+|+.. ++. +. ..|...++.++...+.
T Consensus 43 ~~~L~~~G---i~laIiT~k~-~~~~~~~l~~lgi~~--~f~-------~~------------kpkp~~~~~~~~~l~~- 96 (169)
T TIGR02726 43 VIVLQLCG---IDVAIITSKK-SGAVRHRAEELKIKR--FHE-------GI------------KKKTEPYAQMLEEMNI- 96 (169)
T ss_pred HHHHHHCC---CEEEEEECCC-cHHHHHHHHHCCCcE--EEe-------cC------------CCCHHHHHHHHHHcCc-
Confidence 44566778 9999999995 789999999888642 221 00 1466778888877765
Q ss_pred CCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHHh
Q 012437 375 RKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG 411 (463)
Q Consensus 375 ~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~~ 411 (463)
...+++||||+.||+.|++.|++++++.+. +.+++.+
T Consensus 97 ~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A 134 (169)
T TIGR02726 97 SDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA 134 (169)
T ss_pred CHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence 357899999999999999999999999764 5565544
No 93
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.17 E-value=1.4e-05 Score=73.70 Aligned_cols=109 Identities=10% Similarity=0.083 Sum_probs=69.2
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC--------------HHHHHHHHHhcCCCcceEEeeceEEccceeecc
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSSAGLNALNVHANEFSFKESISTGE 349 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--------------~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~ 349 (463)
++.+.||+.++|+.|+++| ++++|+|.+-. ..++...+.++++....++....... + .+.
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G---~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~-~--~~~ 97 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMG---YALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPE-G--VEE 97 (176)
T ss_pred HeEECCCHHHHHHHHHHCC---CEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCc-c--ccc
Confidence 4678999999999999999 99999997631 13444556655544223222111110 0 111
Q ss_pred ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeE
Q 012437 350 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399 (463)
Q Consensus 350 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigi 399 (463)
+...+..+--+...+...+++.+. ...+++||||+.+|+.+++.||+..
T Consensus 98 ~~~~~~~~KP~p~~~~~a~~~~~~-~~~~~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 98 FRQVCDCRKPKPGMLLQARKELHI-DMAQSYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred ccCCCCCCCCCHHHHHHHHHHcCc-ChhhEEEEcCCHHHHHHHHHCCCcE
Confidence 111111222245667777766665 3578999999999999999999854
No 94
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=98.15 E-value=8.6e-06 Score=94.46 Aligned_cols=108 Identities=21% Similarity=0.272 Sum_probs=78.1
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEE-ccceeecccc-------------
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF-KESISTGEII------------- 351 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~-~~g~~tG~~~------------- 351 (463)
++||+..+.++.|++.| +++.+||+.- ......+.++.|+.....+.+.-.. ++.+.+|.-.
T Consensus 646 p~r~~v~~aI~~l~~aG---Ikv~MiTGD~-~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~ 721 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAG---INVHMLTGDF-PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKA 721 (1053)
T ss_pred CCchhHHHHHHHHHHCC---CEEEEECCCC-HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhh
Confidence 89999999999999999 9999999874 6778888888887422111111000 0123333210
Q ss_pred ----ccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEc
Q 012437 352 ----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 402 (463)
Q Consensus 352 ----~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~ 402 (463)
-.-+++.+|.++++.+++. +..+.++|||.||.+||+.||+||+++
T Consensus 722 ~~~V~ar~sP~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 722 LCLVIARCAPQTKVKMIEALHRR-----KAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred cCeEEEecCHHHHHHHHHHHHhc-----CCeeEEeCCCcchHHHHHhCCccEecC
Confidence 0124567999999988763 356789999999999999999999997
No 95
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.15 E-value=1.2e-05 Score=72.02 Aligned_cols=104 Identities=14% Similarity=0.156 Sum_probs=69.5
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccC--------------HHHHHHHHHhcCCCcceEEeeceEEccceeeccc
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--------------GDLIRASFSSAGLNALNVHANEFSFKESISTGEI 350 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--------------~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~ 350 (463)
+.++||+.++|+.|+++| +.++|+|.+-. ...+...++++|+.....+.......+.
T Consensus 26 ~~~~~g~~~~l~~Lk~~g---~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~------ 96 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAG---YTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADN------ 96 (147)
T ss_pred eEEcCChHHHHHHHHHCC---CEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCC------
Confidence 468999999999999999 99999998631 0356667777775321112110000000
Q ss_pred cccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe-eEEE
Q 012437 351 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 401 (463)
Q Consensus 351 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi-giv~ 401 (463)
....--+.+.+...+...+. ...+++||||+..|+.+++.+|+ .|.+
T Consensus 97 ---~~~~KP~~~~~~~~~~~~~~-~~~e~i~IGDs~~Di~~A~~~Gi~~v~i 144 (147)
T TIGR01656 97 ---CSCRKPKPGLILEALKRLGV-DASRSLVVGDRLRDLQAARNAGLAAVLL 144 (147)
T ss_pred ---CCCCCCCHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHCCCCEEEe
Confidence 00112356777777777665 35789999999999999999999 4444
No 96
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.14 E-value=1.1e-05 Score=92.02 Aligned_cols=92 Identities=24% Similarity=0.308 Sum_probs=75.2
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
.+|||+.+.++.|++.| +++.++|+.- ....+.++++.|++ +++++ ..+.+|.+.++
T Consensus 650 ~~r~~a~~~i~~L~~~g---i~v~~~Tgd~-~~~a~~ia~~lgi~--~~~~~-----------------~~p~~K~~~i~ 706 (834)
T PRK10671 650 PLRSDSVAALQRLHKAG---YRLVMLTGDN-PTTANAIAKEAGID--EVIAG-----------------VLPDGKAEAIK 706 (834)
T ss_pred cchhhHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCCC--EEEeC-----------------CCHHHHHHHHH
Confidence 78999999999999999 9999999874 77888888888864 23331 11346999998
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
++..+ +..+++||||.||.++++.||+||++++.+
T Consensus 707 ~l~~~-----~~~v~~vGDg~nD~~al~~Agvgia~g~g~ 741 (834)
T PRK10671 707 RLQSQ-----GRQVAMVGDGINDAPALAQADVGIAMGGGS 741 (834)
T ss_pred HHhhc-----CCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence 87652 467999999999999999999999998753
No 97
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=98.13 E-value=1.8e-05 Score=72.39 Aligned_cols=88 Identities=11% Similarity=0.078 Sum_probs=57.7
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccccCCCCcc
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIEKVESPID 359 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~ 359 (463)
.+.+.++||+.++|+. ++|+|.+ +..++...++++|+... .|++.+ ....+++
T Consensus 86 ~~~~~~~~g~~~~L~~----------~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~-----~~~~~KP--------- 140 (175)
T TIGR01493 86 YKNLPPWPDSAAALAR----------VAILSNA-SHWAFDQFAQQAGLPWYFDRAFSVD-----TVRAYKP--------- 140 (175)
T ss_pred HhcCCCCCchHHHHHH----------HhhhhCC-CHHHHHHHHHHCCCHHHHhhhccHh-----hcCCCCC---------
Confidence 4567899999999982 6799987 48889999988876421 122211 1111111
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhc
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 395 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A 395 (463)
..+.+...+...+. ...++++|||+..|+.+++.+
T Consensus 141 ~p~~f~~~~~~~~~-~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 141 DPVVYELVFDTVGL-PPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CHHHHHHHHHHHCC-CHHHeEeEecChhhHHHHhcC
Confidence 23444555555554 357899999999999998764
No 98
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.11 E-value=1.2e-05 Score=92.03 Aligned_cols=108 Identities=14% Similarity=0.212 Sum_probs=76.1
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eE-EeeceEE-cccee-----eccccccCCC
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NV-HANEFSF-KESIS-----TGEIIEKVES 356 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I-~aN~l~~-~~g~~-----tG~~~~~~~~ 356 (463)
++|||+.+.++.|++.| +++.++|+.- ......+.++.|+... .+ -..++.- ++... .-.+.. -.+
T Consensus 528 p~r~~~~~~i~~l~~~G---i~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfa-r~~ 602 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGG---VRIIMITGDS-QETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFA-RAS 602 (884)
T ss_pred cchhHHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEE-ECC
Confidence 89999999999999999 9999999874 6778888888887421 11 1111110 00000 000001 145
Q ss_pred CcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC
Q 012437 357 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 403 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~ 403 (463)
+.+|.++++.+... +..+.++|||.||.++++.||+||.++.
T Consensus 603 P~~K~~iv~~lq~~-----g~~v~mvGDGvND~pAl~~AdVGia~g~ 644 (884)
T TIGR01522 603 PEHKMKIVKALQKR-----GDVVAMTGDGVNDAPALKLADIGVAMGQ 644 (884)
T ss_pred HHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHHhCCeeEecCC
Confidence 67899999887753 4678899999999999999999999974
No 99
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.10 E-value=2e-05 Score=71.99 Aligned_cols=105 Identities=20% Similarity=0.191 Sum_probs=71.1
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEcccc--------------CHHHHHHHHHhcCCCcceEE-eeceEEccceeec
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW--------------CGDLIRASFSSAGLNALNVH-ANEFSFKESISTG 348 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--------------s~~~I~~~l~~~gl~~~~I~-aN~l~~~~g~~tG 348 (463)
.+.+.||+.++|+.|+++| ++++|+|.+- ....+..+++++|+.-..++ |-. + ..+
T Consensus 27 ~~~~~pgv~e~L~~L~~~g---~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~--~----~~~ 97 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAG---YKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPH--F----PDD 97 (161)
T ss_pred HeeECCCHHHHHHHHHHCC---CeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCC--C----CCC
Confidence 3688999999999999999 9999999741 13467788888886411122 100 0 000
Q ss_pred cccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee-EEEc
Q 012437 349 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 402 (463)
Q Consensus 349 ~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig-iv~~ 402 (463)
. ....--|...+..+.+..+. ...+++||||+.+|+.++..+++. |.+.
T Consensus 98 ~----~~~~KP~~~~~~~~~~~~~~-~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 98 N----CDCRKPKIKLLEPYLKKNLI-DKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred C----CCCCCCCHHHHHHHHHHcCC-CHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 1 11111255677777776654 357899999999999999999994 4443
No 100
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.09 E-value=2.7e-05 Score=68.01 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=69.0
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccC-------HHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCC
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWC-------GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESP 357 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s-------~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g 357 (463)
..+.||+.++|+.|+++| ++++|+|.+.. ...++.+++.+++....++ .++...
T Consensus 24 ~~~~~~v~~~l~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~~~------ 84 (132)
T TIGR01662 24 RILYPEVPDALAELKEAG---YKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLY----------ACPHCR------ 84 (132)
T ss_pred heeCCCHHHHHHHHHHCC---CEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEE----------ECCCCC------
Confidence 358899999999999998 99999998741 4568888888776321111 111011
Q ss_pred cchHHHHHHHHHHhC-CCCCceEEEEcC-CcccHHHhHhcCe-eEEE
Q 012437 358 IDKVQAFNNTLEKYG-TDRKNLSVYIGD-SVGDLLCLLEADI-GIVI 401 (463)
Q Consensus 358 ~~K~~~l~~l~~~~~-~~~~~~vIyIGD-s~tDl~~l~~Adi-giv~ 401 (463)
--|.+.+..++...+ . ...+++|||| +.+|+.+++.+|+ +|.+
T Consensus 85 KP~~~~~~~~~~~~~~~-~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~ 130 (132)
T TIGR01662 85 KPKPGMFLEALKRFNEI-DPEESVYVGDQDLTDLQAAKRAGLAFILV 130 (132)
T ss_pred CCChHHHHHHHHHcCCC-ChhheEEEcCCCcccHHHHHHCCCeEEEe
Confidence 125567777777663 4 3678999999 7999999999998 4443
No 101
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.09 E-value=1.6e-05 Score=74.08 Aligned_cols=85 Identities=18% Similarity=0.348 Sum_probs=65.5
Q ss_pred HHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCC
Q 012437 295 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 374 (463)
Q Consensus 295 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~ 374 (463)
++.++++| +++.|+|+.. ...++.+++++|+.. ++. | ...|...+++++...+..
T Consensus 57 i~~L~~~G---i~v~I~T~~~-~~~v~~~l~~lgl~~--~f~-----------g--------~~~k~~~l~~~~~~~gl~ 111 (183)
T PRK09484 57 IRCLLTSG---IEVAIITGRK-SKLVEDRMTTLGITH--LYQ-----------G--------QSNKLIAFSDLLEKLAIA 111 (183)
T ss_pred HHHHHHCC---CEEEEEeCCC-cHHHHHHHHHcCCce--eec-----------C--------CCcHHHHHHHHHHHhCCC
Confidence 45556678 9999999985 678899999877532 221 1 234788888888887753
Q ss_pred CCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 375 RKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 375 ~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
..+++||||+.+|+.|++.|++++++++..
T Consensus 112 -~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 112 -PEQVAYIGDDLIDWPVMEKVGLSVAVADAH 141 (183)
T ss_pred -HHHEEEECCCHHHHHHHHHCCCeEecCChh
Confidence 578999999999999999999998876543
No 102
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.05 E-value=0.00011 Score=72.41 Aligned_cols=115 Identities=14% Similarity=0.159 Sum_probs=73.7
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
...+.||+.+|++.++++| ++++|||.+-. .+.....|+.+|++.. .-..+.+.+ ....|.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G---~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~--~~d~lllr~------------~~~~K~ 178 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKG---VKIFYVSNRSEKEKAATLKNLKRFGFPQA--DEEHLLLKK------------DKSSKE 178 (266)
T ss_pred CCCcCccHHHHHHHHHHCC---CeEEEEeCCCcchHHHHHHHHHHcCcCCC--CcceEEeCC------------CCCCcH
Confidence 4678999999999999999 99999998641 3334466777787531 011111111 112477
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEc--CChhHHHHhhhhCceeeecCc
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG--SSSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~--~~~~L~~~~~~~gi~~~p~~~ 423 (463)
.+.+.+.+.+ .-++||||..+|+......+. -. ....+.+..++||-+|+-|-+
T Consensus 179 ~rr~~I~~~y-----~Ivl~vGD~~~Df~~~~~~~~---~~~~r~~~v~~~~~~fG~~~i~lPN 234 (266)
T TIGR01533 179 SRRQKVQKDY-----EIVLLFGDNLLDFDDFFYKDK---ESQDRQALVLQNQEKFGKKFIILPN 234 (266)
T ss_pred HHHHHHHhcC-----CEEEEECCCHHHhhhhhccCc---chHHHHHHHHHHHHHhCCCeEEecC
Confidence 6666665532 347899999999965443321 11 123467777899999986643
No 103
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.04 E-value=1.8e-05 Score=68.40 Aligned_cols=89 Identities=21% Similarity=0.260 Sum_probs=67.4
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
.|.+...+.++.|.+. ++++|-|+-- .-++...++-.|++...+++ | .....|.+.++
T Consensus 30 klf~ev~e~iqeL~d~----V~i~IASgDr-~gsl~~lae~~gi~~~rv~a-----------~------a~~e~K~~ii~ 87 (152)
T COG4087 30 KLFSEVSETIQELHDM----VDIYIASGDR-KGSLVQLAEFVGIPVERVFA-----------G------ADPEMKAKIIR 87 (152)
T ss_pred EEcHhhHHHHHHHHHh----heEEEecCCc-chHHHHHHHHcCCceeeeec-----------c------cCHHHHHHHHH
Confidence 6788889999999875 7899999864 55677777766654433322 1 11235888888
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
++.++ ++.+++||||.||.++|+.||+||+.
T Consensus 88 eLkk~-----~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 88 ELKKR-----YEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred HhcCC-----CcEEEEecCCcchHHHhhhcccceEE
Confidence 88763 57899999999999999999999775
No 104
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.04 E-value=2.1e-05 Score=86.83 Aligned_cols=92 Identities=22% Similarity=0.275 Sum_probs=77.0
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
.+||++...+..|++.| ++++++|+-- ..-.+.+.++.|+ ..|||+- .+.+|.+.++
T Consensus 723 ~vr~~a~~av~~Lk~~G---i~v~mLTGDn-~~aA~svA~~VGi--~~V~aev-----------------~P~~K~~~Ik 779 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMG---IKVVMLTGDN-DAAARSVAQQVGI--DNVYAEV-----------------LPEQKAEKIK 779 (951)
T ss_pred ccchhHHHHHHHHHhcC---ceEEEEcCCC-HHHHHHHHHhhCc--ceEEecc-----------------CchhhHHHHH
Confidence 89999999999999999 9999999863 5667888888775 4466632 2457999999
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
++.++ ...+.+||||.||-++|..||+||+++..+
T Consensus 780 ~lq~~-----~~~VaMVGDGINDaPALA~AdVGIaig~gs 814 (951)
T KOG0207|consen 780 EIQKN-----GGPVAMVGDGINDAPALAQADVGIAIGAGS 814 (951)
T ss_pred HHHhc-----CCcEEEEeCCCCccHHHHhhccceeecccc
Confidence 99874 356899999999999999999999998874
No 105
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.02 E-value=3.8e-05 Score=78.59 Aligned_cols=103 Identities=17% Similarity=0.136 Sum_probs=68.5
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEcc----ccCHHHH-----------HHHHHhcCCCcceEEeeceEEccceeec
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSY----CWCGDLI-----------RASFSSAGLNALNVHANEFSFKESISTG 348 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~----g~s~~~I-----------~~~l~~~gl~~~~I~aN~l~~~~g~~tG 348 (463)
.+.++||+.++|+.|+++| ++++|+|. |+ +.++ ..+++..|+.. +.+. ..+
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G---~kL~IvTNq~g~G~-~~~~~~~l~~~~~~i~~iL~~~gl~f-----d~i~-----i~~ 93 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAG---YKLVMVTNQDGLGT-DSFPQEDFDPPHNLMMQIFESQGIKF-----DEVL-----ICP 93 (354)
T ss_pred cceECcCHHHHHHHHHhCC---CeEEEEECCccccC-ccccHHHHhhHHHHHHHHHHHcCCce-----eeEE-----EeC
Confidence 3789999999999999988 99999998 33 3333 34445444321 1111 111
Q ss_pred cc-cccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee-EEE
Q 012437 349 EI-IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVI 401 (463)
Q Consensus 349 ~~-~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig-iv~ 401 (463)
.. ...+...-.|...+..++...+. ...+++||||+.+|+.+++.+++. |.+
T Consensus 94 ~~~sd~~~~rKP~p~~l~~a~~~l~v-~~~~svmIGDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 94 HFPEDNCSCRKPKTGLVEEYLAEGAI-DLANSYVIGDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred CcCcccCCCCCCCHHHHHHHHHHcCC-CcccEEEEcCCHHHHHHHHHCCCeEEEE
Confidence 00 11222334567777777766554 357899999999999999999994 444
No 106
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.99 E-value=3.3e-05 Score=88.80 Aligned_cols=109 Identities=20% Similarity=0.213 Sum_probs=74.8
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc--ceEEeeceEEccc---eeec--------c-cc
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA--LNVHANEFSFKES---ISTG--------E-II 351 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~--~~I~aN~l~~~~g---~~tG--------~-~~ 351 (463)
++|||+.+.++.|++.| +++.++|+. +......+.++.|+.. ..+... .+.+. .... + ..
T Consensus 537 plr~~v~e~I~~l~~aG---I~v~miTGD-~~~tA~~ia~~~gi~~~~~~v~~~--~~~g~~l~~~~~~~~~~~~~~~~v 610 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAG---IRVIMITGD-NKETAEAICRRIGIFSPDEDVTFK--SFTGREFDEMGPAKQRAACRSAVL 610 (917)
T ss_pred CCchhHHHHHHHHHHCC---CEEEEecCC-CHHHHHHHHHHcCCCCCCccccce--eeeHHHHhhCCHHHHHHhhhcCeE
Confidence 89999999999999999 999999986 3667778888888632 111110 11110 0000 0 00
Q ss_pred ccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 352 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 352 ~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
..-.++.+|.+.++.+... +..+.++|||.||.+|++.||+||+++...
T Consensus 611 ~ar~~P~~K~~iV~~lq~~-----g~~va~iGDG~ND~~alk~AdVGia~g~g~ 659 (917)
T TIGR01116 611 FSRVEPSHKSELVELLQEQ-----GEIVAMTGDGVNDAPALKKADIGIAMGSGT 659 (917)
T ss_pred EEecCHHHHHHHHHHHHhc-----CCeEEEecCCcchHHHHHhCCeeEECCCCc
Confidence 0113456898888876542 356778999999999999999999997543
No 107
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.99 E-value=0.00031 Score=66.77 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=70.5
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
.+...|++.++|+.++++ .+++|+|.|. .......+++.|+.. +.+.+...+..-..++. .++
T Consensus 97 ~~~~~~~~~~~L~~l~~~----~~l~ilTNg~-~~~~~~~l~~~gl~~---~Fd~v~~s~~~g~~KP~---------~~~ 159 (229)
T COG1011 97 LLPDYPEALEALKELGKK----YKLGILTNGA-RPHQERKLRQLGLLD---YFDAVFISEDVGVAKPD---------PEI 159 (229)
T ss_pred hCccChhHHHHHHHHHhh----ccEEEEeCCC-hHHHHHHHHHcCChh---hhheEEEecccccCCCC---------cHH
Confidence 378999999999999875 7899999885 678888888888543 33333322211111111 245
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccH-HHhHhcCe-eEEEcCC
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDL-LCLLEADI-GIVIGSS 404 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl-~~l~~Adi-giv~~~~ 404 (463)
++..+...+.. +.++++|||+.... ..+..+|. +|.+...
T Consensus 160 f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~ 201 (229)
T COG1011 160 FEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRG 201 (229)
T ss_pred HHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCC
Confidence 55666666653 57899999987655 99999999 6666543
No 108
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.95 E-value=4.4e-05 Score=70.66 Aligned_cols=104 Identities=14% Similarity=0.064 Sum_probs=63.7
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEcccc-------C-------HHHHHHHHHhcCCCcceEEeeceEEccceeeccc
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW-------C-------GDLIRASFSSAGLNALNVHANEFSFKESISTGEI 350 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~-------s-------~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~ 350 (463)
+.+.||+.++|++|+++| ++++|+|.+- . .+.+...+++.|+....++.......+....++
T Consensus 28 ~~~~pgv~e~L~~Lk~~g---~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~K- 103 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAG---YRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRK- 103 (181)
T ss_pred eEECCCHHHHHHHHHHCC---CEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCC-
Confidence 568899999999999998 9999999752 0 133444555555321111110000000000111
Q ss_pred cccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 351 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 351 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
-+...+...+...+. ...++++|||+.+|+.+++.||+.++.
T Consensus 104 --------P~p~~~~~~~~~l~~-~~~~~~~VgDs~~Di~~A~~aG~~~i~ 145 (181)
T PRK08942 104 --------PKPGMLLSIAERLNI-DLAGSPMVGDSLRDLQAAAAAGVTPVL 145 (181)
T ss_pred --------CCHHHHHHHHHHcCC-ChhhEEEEeCCHHHHHHHHHCCCeEEE
Confidence 123555555555554 357899999999999999999985443
No 109
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.86 E-value=0.00014 Score=66.16 Aligned_cols=104 Identities=16% Similarity=0.184 Sum_probs=62.0
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHHh-----cCCCcceEEeec-eEEccceeeccccccCCCCc
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSS-----AGLNALNVHANE-FSFKESISTGEIIEKVESPI 358 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~-----~gl~~~~I~aN~-l~~~~g~~tG~~~~~~~~g~ 358 (463)
+.||..++++.++++| ++++++|+-- .....+.++.. ++++.-.++++. -.+.+ ..+++.... ...
T Consensus 28 ~~~~~~~a~~~l~~~G---~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~--~~~e~i~~~-~~~ 101 (157)
T smart00775 28 THPGVAKLYRDIQNNG---YKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA--LHREVISKK-PEV 101 (157)
T ss_pred CCHHHHHHHHHHHHcC---CeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh--hhcccccCC-HHH
Confidence 3688999999999999 9999999841 11223567766 335433455433 11100 112221110 011
Q ss_pred chHHHHHHHHHHhCCCCCceEE-EEcCCcccHHHhHhcCe
Q 012437 359 DKVQAFNNTLEKYGTDRKNLSV-YIGDSVGDLLCLLEADI 397 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~vI-yIGDs~tDl~~l~~Adi 397 (463)
-|...++++....... ....+ .+||..+|..+-..+++
T Consensus 102 ~K~~~l~~i~~~~~~~-~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 102 FKIACLRDIKSLFPPQ-GNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHHHhcCCC-CCCEEEEeCCCchhHHHHHHcCC
Confidence 3777888887643311 12343 58999999999999998
No 110
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.86 E-value=6.4e-05 Score=82.35 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=78.0
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeecc-ccc------------
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGE-IIE------------ 352 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~-~~~------------ 352 (463)
++|++..+-++.|++.| ++++++++-. ..--..+.++.|+ +++.-++.+-.+||+ |+.
T Consensus 584 PPR~ev~~ai~~c~~aG---IrV~mITGD~-~~TA~AI~r~iGi-----~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~ 654 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAG---IRVIMITGDN-KETAEAIAREIGI-----FSEDEDVSSMALTGSEFDDLSDEELDDAVRR 654 (972)
T ss_pred CCchhHHHHHHHHHHcC---CEEEEEcCCC-HHHHHHHHHHhCC-----CcCCccccccccchhhhhcCCHHHHHHHhhc
Confidence 89999999999999999 9999999864 6667777777664 444444443445552 220
Q ss_pred -c---CCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEc
Q 012437 353 -K---VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 402 (463)
Q Consensus 353 -~---~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~ 402 (463)
. -+.+..|.++++.+.+. ++-+-+-|||+||-++|+.|||||+||
T Consensus 655 ~~vFaR~~P~HK~kIVeaLq~~-----geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 655 VLVFARAEPQHKLKIVEALQSR-----GEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred ceEEEecCchhHHHHHHHHHhc-----CCEEEecCCCccchhhhhhcccceeec
Confidence 0 14567899999988763 344557999999999999999999998
No 111
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=97.83 E-value=7.2e-05 Score=73.35 Aligned_cols=54 Identities=20% Similarity=0.306 Sum_probs=44.3
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHH
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRV 410 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~ 410 (463)
.+.+|...++.+++.++.+ ..++++||||.||++|++.|++||++++. +.+++.
T Consensus 196 ~~~~K~~~l~~l~~~~gi~-~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~ 250 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWS-MKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKAR 250 (272)
T ss_pred CCCChHHHHHHHHHHcCCC-HHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHh
Confidence 3456999999999887763 57899999999999999999999999764 445433
No 112
>PRK06769 hypothetical protein; Validated
Probab=97.78 E-value=0.00011 Score=67.83 Aligned_cols=101 Identities=14% Similarity=0.136 Sum_probs=63.5
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHH--------HHHHHHHhcCCCcceEEeeceEEccceeeccccccCCC
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD--------LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVES 356 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~--------~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~ 356 (463)
+.+.||+.++|+.|+++| ++++|+|.+. .. -+...++..|+.. ++.......++.. .
T Consensus 27 ~~~~pgv~e~L~~Lk~~G---~~l~I~Tn~~-~~~~~~~~~~~~~~~l~~~g~~~--~~~~~~~~~~~~~---------~ 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANH---IKIFSFTNQP-GIADGIATIADFVQELKGFGFDD--IYLCPHKHGDGCE---------C 91 (173)
T ss_pred eEECCCHHHHHHHHHHCC---CEEEEEECCc-hhcCCcCCHHHHHHHHHhCCcCE--EEECcCCCCCCCC---------C
Confidence 568999999999999999 9999999753 21 1222345555422 2210000000000 0
Q ss_pred CcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee-EEE
Q 012437 357 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVI 401 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig-iv~ 401 (463)
.--+...+.+.+++.+. ...+++||||+.+|+.+++.||+- |.+
T Consensus 92 ~KP~p~~~~~~~~~l~~-~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGL-DLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred CCCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 11134566666666554 357899999999999999999994 444
No 113
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.75 E-value=7.3e-05 Score=86.69 Aligned_cols=109 Identities=19% Similarity=0.171 Sum_probs=74.8
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eE---Ee----------eceEEccceeeccc
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NV---HA----------NEFSFKESISTGEI 350 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I---~a----------N~l~~~~g~~tG~~ 350 (463)
++||+.++.++.+++.| +++.++|+-- ..-...+.++.|+-.. .. +. |.-....-+.+|.-
T Consensus 568 plr~~v~~aI~~l~~~G---i~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~ 643 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAG---IKVIMVTGDH-PITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSD 643 (997)
T ss_pred CChHHHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHH
Confidence 89999999999999999 9999999863 6667778887775210 00 00 00000001223311
Q ss_pred ---------c---c-------cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC
Q 012437 351 ---------I---E-------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 403 (463)
Q Consensus 351 ---------~---~-------~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~ 403 (463)
. . .-.++.+|.++++.+++. +..+.++|||.||.+|++.||+||+++.
T Consensus 644 l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-----g~vv~~~GDG~ND~paLk~AdVGiamg~ 710 (997)
T TIGR01106 644 LKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMGI 710 (997)
T ss_pred hhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHhhCCcceecCC
Confidence 0 0 013467999999988753 3567799999999999999999999974
No 114
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.72 E-value=8.2e-05 Score=85.43 Aligned_cols=108 Identities=17% Similarity=0.221 Sum_probs=76.4
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccc---eeec-ccc-----cc---
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKES---ISTG-EII-----EK--- 353 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g---~~tG-~~~-----~~--- 353 (463)
++||+.++.++.|++.| +++.++|+-- ..--..+.++.|+.... .. .+..++. ...+ ++. ..
T Consensus 547 ppr~~v~~aI~~l~~AG---I~v~MiTGD~-~~TA~aIa~~~Gi~~~~-~~-~~vi~G~el~~l~~~el~~~~~~~~VfA 620 (917)
T COG0474 547 PPREDVKEAIEELREAG---IKVWMITGDH-VETAIAIAKECGIEAEA-ES-ALVIDGAELDALSDEELAELVEELSVFA 620 (917)
T ss_pred CCCccHHHHHHHHHHCC---CcEEEECCCC-HHHHHHHHHHcCCCCCC-Cc-eeEeehHHhhhcCHHHHHHHhhhCcEEE
Confidence 89999999999999999 9999999853 55566777777753221 00 1122211 0111 110 01
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 354 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 354 ~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
=.++.+|.++++.+++. +..+-++|||.||.+||+.|||||.++..
T Consensus 621 RvsP~qK~~IV~~lq~~-----g~vVamtGDGvNDapALk~ADVGIamg~~ 666 (917)
T COG0474 621 RVSPEQKARIVEALQKS-----GHVVAMTGDGVNDAPALKAADVGIAMGGE 666 (917)
T ss_pred EcCHHHHHHHHHHHHhC-----CCEEEEeCCCchhHHHHHhcCccEEeccc
Confidence 14678999999988874 35677999999999999999999999763
No 115
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.72 E-value=4.1e-05 Score=75.19 Aligned_cols=56 Identities=21% Similarity=0.389 Sum_probs=48.7
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-ChhHHHHh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 411 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~~~L~~~~ 411 (463)
..+..|...++.+++.++.+ ..+++++|||.||++|++.||+||+|++ .+.+++.|
T Consensus 192 ~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A 248 (270)
T PRK10513 192 DKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVA 248 (270)
T ss_pred CCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhc
Confidence 34678999999999988774 5789999999999999999999999987 46777776
No 116
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.70 E-value=0.00022 Score=65.93 Aligned_cols=112 Identities=6% Similarity=-0.019 Sum_probs=68.0
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc-eEEeeceEEccceeeccccccCCCCcch
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDK 360 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K 360 (463)
...+.++||+.++++.|+++| +++.|+|.+=....++.++...++... .-+.+.-.| +.+.++.-. ...|
T Consensus 41 ~~~~~l~pGv~elL~~Lk~~G---~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~F-d~iv~~~~~-----~~~k 111 (174)
T TIGR01685 41 GTEVTLIKEVRDVLQTLKDAG---TYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLF-DDRIEIYKP-----NKAK 111 (174)
T ss_pred CCEEEEcccHHHHHHHHHHCC---CEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhc-eeeeeccCC-----chHH
Confidence 346789999999999999999 999999976226778888887775300 000000001 111111100 1112
Q ss_pred H--HHHHHHHHHh--CCCCCceEEEEcCCcccHHHhHhcCeeEEEcC
Q 012437 361 V--QAFNNTLEKY--GTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 403 (463)
Q Consensus 361 ~--~~l~~l~~~~--~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~ 403 (463)
. ..++.+.... +. ...+++||||+..|+.++..|++.++...
T Consensus 112 p~~~i~~~~~~~~~~gl-~p~e~l~VgDs~~di~aA~~aGi~~i~v~ 157 (174)
T TIGR01685 112 QLEMILQKVNKVDPSVL-KPAQILFFDDRTDNVREVWGYGVTSCYCP 157 (174)
T ss_pred HHHHHHHHhhhcccCCC-CHHHeEEEcChhHhHHHHHHhCCEEEEcC
Confidence 1 1222222211 12 35789999999999999999999655543
No 117
>PRK10976 putative hydrolase; Provisional
Probab=97.68 E-value=4.7e-05 Score=74.64 Aligned_cols=57 Identities=21% Similarity=0.294 Sum_probs=49.1
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-ChhHHHHhh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGS 412 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~~~L~~~~~ 412 (463)
..+..|...++.+++.++.+ ..+++++|||.||++|++.|++||+|++ .+.+++.|.
T Consensus 186 ~~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 243 (266)
T PRK10976 186 AGGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLP 243 (266)
T ss_pred cCCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCC
Confidence 45678999999999988874 5789999999999999999999999987 467777663
No 118
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.66 E-value=0.00042 Score=68.75 Aligned_cols=96 Identities=20% Similarity=0.193 Sum_probs=62.3
Q ss_pred cEEEEccccCHHHHHHHHHhcCCCcce--EEeeceEEccc---eeeccccccCCC---CcchHHHHHHHHHHhCCC-CCc
Q 012437 307 NVHVLSYCWCGDLIRASFSSAGLNALN--VHANEFSFKES---ISTGEIIEKVES---PIDKVQAFNNTLEKYGTD-RKN 377 (463)
Q Consensus 307 ~~~IvS~g~s~~~I~~~l~~~gl~~~~--I~aN~l~~~~g---~~tG~~~~~~~~---g~~K~~~l~~l~~~~~~~-~~~ 377 (463)
...+.++. ..-.+..+.+.|+...+ -+.+-+.|.++ ..||-..+.+.. +.+|.++++.++..+... ..-
T Consensus 150 Ep~~w~~~--~~~~~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~ 227 (302)
T PRK12702 150 EIFSYSGD--PARLREAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPI 227 (302)
T ss_pred cceEecCC--HHHHHHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCc
Confidence 34455553 33336777777753321 12333333332 256655555555 789999999888765431 234
Q ss_pred eEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 378 LSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 378 ~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
.+|.+|||.||++||..||++||+.+.
T Consensus 228 ~tiaLGDspND~~mLe~~D~~vvi~~~ 254 (302)
T PRK12702 228 KALGIGCSPPDLAFLRWSEQKVVLPSP 254 (302)
T ss_pred eEEEecCChhhHHHHHhCCeeEEecCC
Confidence 789999999999999999999999553
No 119
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=97.66 E-value=0.00016 Score=77.76 Aligned_cols=87 Identities=23% Similarity=0.253 Sum_probs=70.8
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 364 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 364 (463)
-++||+..+.++.|++.| +++.++|+.- ......+.++.|+ ++ ...+.+|.+.+
T Consensus 346 d~lr~~~~~~i~~l~~~g---i~~~~ltGD~-~~~a~~ia~~lgi-----~~-----------------~~~p~~K~~~v 399 (499)
T TIGR01494 346 DPLRDDAKETISELREAG---IRVIMLTGDN-VLTAKAIAKELGI-----FA-----------------RVTPEEKAALV 399 (499)
T ss_pred CCCchhHHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCc-----ee-----------------ccCHHHHHHHH
Confidence 389999999999999988 8999999874 6666666666553 11 14566899999
Q ss_pred HHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEc
Q 012437 365 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 402 (463)
Q Consensus 365 ~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~ 402 (463)
+++... +..+.++|||.||.+++..||+||+++
T Consensus 400 ~~l~~~-----g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 400 EALQKK-----GRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HHHHHC-----CCEEEEECCChhhHHHHHhCCCccccc
Confidence 988652 357899999999999999999999997
No 120
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=97.64 E-value=0.0002 Score=83.62 Aligned_cols=111 Identities=13% Similarity=0.110 Sum_probs=77.0
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC--cceEEee-----------ceEEc---c-----
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHAN-----------EFSFK---E----- 343 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~--~~~I~aN-----------~l~~~---~----- 343 (463)
-++||+..+.++.|++.| +++.++|+-- ..-...+.++.|+- +..++.- .+.+. +
T Consensus 655 d~lr~~~~~~I~~l~~ag---i~v~miTGD~-~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRAS---IRTVMITGDN-PLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAS 730 (1054)
T ss_pred cCCCccHHHHHHHHHHCC---CeEEEECCCC-HHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccc
Confidence 489999999999999999 9999999863 55667777788862 1122210 11100 0
Q ss_pred -----------------------ceeecccc---------------c--c---CCCCcchHHHHHHHHHHhCCCCCceEE
Q 012437 344 -----------------------SISTGEII---------------E--K---VESPIDKVQAFNNTLEKYGTDRKNLSV 380 (463)
Q Consensus 344 -----------------------g~~tG~~~---------------~--~---~~~g~~K~~~l~~l~~~~~~~~~~~vI 380 (463)
-..||... . . =.++.+|.++++.+.+. +..+.
T Consensus 731 ~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~-----g~~V~ 805 (1054)
T TIGR01657 731 TQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL-----DYTVG 805 (1054)
T ss_pred ccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-----CCeEE
Confidence 02233210 0 1 14567899888887752 45678
Q ss_pred EEcCCcccHHHhHhcCeeEEEcCC
Q 012437 381 YIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 381 yIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
++|||.||.+||+.||+||+++..
T Consensus 806 m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 806 MCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred EEeCChHHHHHHHhcCcceeeccc
Confidence 999999999999999999999754
No 121
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.64 E-value=0.0003 Score=64.50 Aligned_cols=93 Identities=13% Similarity=0.135 Sum_probs=63.5
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccCH------------HHHHHHHHhcCCCcceEEeeceEEccceeeccccccC
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCG------------DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKV 354 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~------------~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~ 354 (463)
+.||+.++|+.|+++| ++++|+|.+- . ..++.+++++|+....+++.. +..
T Consensus 43 ~~pgv~e~L~~Lk~~G---~~l~I~TN~~-~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~-----~~~-------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEG---YKIVIFTNQS-GIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH-----AGL-------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCC---CEEEEEeCCc-ccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC-----CCC--------
Confidence 6799999999999999 9999999863 3 246778888886432222211 000
Q ss_pred CCCcchHHHHHHHHHHhC--CCCCceEEEEcCCc--------ccHHHhHhcCee
Q 012437 355 ESPIDKVQAFNNTLEKYG--TDRKNLSVYIGDSV--------GDLLCLLEADIG 398 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~--~~~~~~vIyIGDs~--------tDl~~l~~Adig 398 (463)
..--+...+.......+ . ...+++||||+. +|+.++++||+.
T Consensus 106 -~~KP~p~~~~~~~~~~~~~~-~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 106 -YRKPMTGMWEYLQSQYNSPI-KMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred -CCCCccHHHHHHHHHcCCCC-CchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 01113355666666655 3 357899999996 699999999964
No 122
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=97.63 E-value=0.0003 Score=67.53 Aligned_cols=100 Identities=12% Similarity=0.123 Sum_probs=68.3
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc-eEEeeceEEccceeeccccccCCCCcchHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEFSFKESISTGEIIEKVESPIDKVQ 362 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 362 (463)
+..++||+.++|+.++++| ++++|+|.+ +....+.+++..+..++ ..+... |+. . .| .--+.+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G---~~l~I~Sn~-s~~~~~~~~~~~~~~~L~~~f~~~--fd~-~-~g--------~KP~p~ 156 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLG---LRLAVYSSG-SVPAQKLLFGHSDAGNLTPYFSGY--FDT-T-VG--------LKTEAQ 156 (220)
T ss_pred ccCcCcCHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHhhccccchhhhcceE--EEe-C-cc--------cCCCHH
Confidence 4579999999999999999 999999988 47777777765321111 111111 111 1 11 112445
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEE
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 400 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv 400 (463)
.+..+++..+.. ..+++||||+..|+.+++.||+..+
T Consensus 157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 666677766653 5789999999999999999999443
No 123
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.63 E-value=7e-05 Score=73.76 Aligned_cols=78 Identities=15% Similarity=0.156 Sum_probs=58.4
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHHhhhhCceeee--cCchhhHhHHh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGSQFGVTFIP--LYPGLVKKQKE 431 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~~~gi~~~p--~~~~~~~~~~~ 431 (463)
..+..|...++.+++.++.+ ..+++++|||.||++|++.|++||+|++. +.+++.|... .+.+ =+.|+...+++
T Consensus 184 ~~g~sKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~--~v~~~n~edGva~~l~~ 260 (272)
T PRK15126 184 PVGCNKGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHL--PVIGHCRNQAVSHYLTH 260 (272)
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCC--eecCCCcchHHHHHHHH
Confidence 34668999999999988874 57899999999999999999999999874 6777666321 1222 23466666666
Q ss_pred hhcC
Q 012437 432 YTEG 435 (463)
Q Consensus 432 ~~~~ 435 (463)
|...
T Consensus 261 ~~~~ 264 (272)
T PRK15126 261 WLDY 264 (272)
T ss_pred HhcC
Confidence 6543
No 124
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=97.61 E-value=9.3e-05 Score=66.41 Aligned_cols=94 Identities=13% Similarity=0.060 Sum_probs=61.2
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
.+.+|||+.+||++|+ ++ ++++|+|++- ..+++.+++..++.. -+...+...+....+ |..+
T Consensus 43 ~v~l~pG~~e~L~~L~-~~---~~l~I~Ts~~-~~~~~~il~~l~~~~--~~f~~i~~~~d~~~~-----------KP~~ 104 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-EL---FELVVFTAGL-RMYADPVLDLLDPKK--YFGYRRLFRDECVFV-----------KGKY 104 (148)
T ss_pred EEEECCCHHHHHHHHH-hc---cEEEEEeCCc-HHHHHHHHHHhCcCC--CEeeeEEECcccccc-----------CCeE
Confidence 4689999999999998 46 8999999995 889999998776532 111222221111111 1111
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 397 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi 397 (463)
++ -++..+. ...++|+|||+.+|+.+...++|
T Consensus 105 ~k-~l~~l~~-~p~~~i~i~Ds~~~~~aa~~ngI 136 (148)
T smart00577 105 VK-DLSLLGR-DLSNVIIIDDSPDSWPFHPENLI 136 (148)
T ss_pred ee-cHHHcCC-ChhcEEEEECCHHHhhcCccCEE
Confidence 11 1122222 35789999999999999888874
No 125
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=97.58 E-value=0.00013 Score=69.65 Aligned_cols=57 Identities=23% Similarity=0.314 Sum_probs=48.3
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHHhh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGS 412 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~ 412 (463)
..+..|...++.++...+.+ ..++++||||.||++|++.+|+||+|++. +.++++|.
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~ 239 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD 239 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred eCCCCHHHHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence 45678999999999888763 57999999999999999999999999874 56776663
No 126
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.56 E-value=0.00014 Score=71.32 Aligned_cols=57 Identities=21% Similarity=0.345 Sum_probs=49.4
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHHhh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGS 412 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~ 412 (463)
..+.+|...++.+.+.++.. ..+++++|||.||++|+..|+.||+|++. +.+++.++
T Consensus 185 ~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~ 242 (264)
T COG0561 185 PKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD 242 (264)
T ss_pred cCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence 45778999999999988774 57899999999999999999999999884 67777765
No 127
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.52 E-value=0.0006 Score=62.63 Aligned_cols=94 Identities=12% Similarity=0.090 Sum_probs=66.1
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...+.||+.++|+.|+++| ++++|+|.+-....++.+++..|+. .+. +. .--+...
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g---~~l~I~Sn~~~~~~~~~~~~~~gl~---~~~-----------~~-------~KP~p~~ 96 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAG---RKLLIVSNNAGEQRAKAVEKALGIP---VLP-----------HA-------VKPPGCA 96 (170)
T ss_pred CCCcChhHHHHHHHHHHcC---CEEEEEeCCchHHHHHHHHHHcCCE---EEc-----------CC-------CCCChHH
Confidence 4578999999999999998 9999999873245666666655531 110 10 0113445
Q ss_pred HHHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCe-eEEEc
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 402 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adi-giv~~ 402 (463)
+..+++..+. ...+++||||+. +|+.++..+|+ .|.+.
T Consensus 97 ~~~~l~~~~~-~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 97 FRRAHPEMGL-TSEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred HHHHHHHcCC-CHHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 6666666554 357899999998 79999999999 55553
No 128
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.51 E-value=0.003 Score=60.96 Aligned_cols=101 Identities=25% Similarity=0.343 Sum_probs=66.5
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchH--
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV-- 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~-- 361 (463)
...+-+|+.++++++|+.| ..+.|+| |+ ++-.+..+...|+.. .||--+. .+.-|..|-
T Consensus 111 ~~~~~~~~~~~lq~lR~~g---~~l~iis-N~-d~r~~~~l~~~~l~~--------~fD~vv~------S~e~g~~KPDp 171 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKG---TILGIIS-NF-DDRLRLLLLPLGLSA--------YFDFVVE------SCEVGLEKPDP 171 (237)
T ss_pred CceeccHHHHHHHHHHhCC---eEEEEec-CC-cHHHHHHhhccCHHH--------hhhhhhh------hhhhccCCCCh
Confidence 4577888999999999999 8899998 54 566777776666421 1111111 111222332
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCC-cccHHHhHhcCe-eEEEcCC
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGSS 404 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~~Adi-giv~~~~ 404 (463)
++++-.+...+. .+..+++|||+ .||+..++.+|. ++++.++
T Consensus 172 ~If~~al~~l~v-~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 172 RIFQLALERLGV-KPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred HHHHHHHHHhCC-ChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 344444444444 36899999997 588999999999 7877664
No 129
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.51 E-value=0.0005 Score=62.16 Aligned_cols=108 Identities=15% Similarity=0.149 Sum_probs=67.3
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccc--cCHHHHHHHHHhc-----CCCcceEEeeceEEccceeeccccccCCCCc
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYC--WCGDLIRASFSSA-----GLNALNVHANEFSFKESISTGEIIEKVESPI 358 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g--~s~~~I~~~l~~~-----gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~ 358 (463)
..++|+.++++.+.++| +.+.-+|+- |-....+.+|..+ +++.=.++.+.-..-. ....+...+ ..-.
T Consensus 27 ~~h~g~~~l~~~i~~~G---Y~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~-al~rEvi~~-~p~~ 101 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNG---YKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFS-ALHREVISK-DPEE 101 (157)
T ss_pred hhhhcHHHHHHHHHHCC---eEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhh-hhhcccccc-ChHH
Confidence 45788899999999999 999999973 1245567777765 5655455655311100 011111111 0123
Q ss_pred chHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee
Q 012437 359 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 398 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig 398 (463)
-|...|+.++.........-...+|...+|..+-..+|+.
T Consensus 102 fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 102 FKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 5888999888753311112333599999999999999983
No 130
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.50 E-value=0.00012 Score=69.68 Aligned_cols=55 Identities=20% Similarity=0.288 Sum_probs=46.4
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-ChhHHHHh
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 411 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~~~L~~~~ 411 (463)
.+..|...++.+++..+.+ ..++++|||+.||+.|++.|++|++|++ .+.+++.+
T Consensus 146 ~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A 201 (225)
T TIGR01482 146 QGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWA 201 (225)
T ss_pred CCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhc
Confidence 3567999999999887764 5789999999999999999999999987 45666555
No 131
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.49 E-value=0.00012 Score=69.40 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=46.6
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHHh
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG 411 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~~ 411 (463)
.+.+|...++.+++.++.+ ..++++||||.||++|++.|++|++|++. +.+++.|
T Consensus 144 ~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A 199 (215)
T TIGR01487 144 KGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIA 199 (215)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhC
Confidence 4668999999999887764 46799999999999999999999999774 6677665
No 132
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.44 E-value=0.00017 Score=68.96 Aligned_cols=55 Identities=24% Similarity=0.345 Sum_probs=46.5
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-ChhHHHHh
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 411 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~~~L~~~~ 411 (463)
.+..|...++.+++..+.+ ..++++||||.||++|++.|++|+++++ .+.+++.|
T Consensus 154 ~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a 209 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAA 209 (230)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhc
Confidence 4567999999999887763 5789999999999999999999999977 46677655
No 133
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.37 E-value=0.00021 Score=70.55 Aligned_cols=48 Identities=23% Similarity=0.270 Sum_probs=42.2
Q ss_pred CCCcchHHHHHHHHHHhCC---CCCceEEEEcCCcccHHHhHhcCeeEEEcC
Q 012437 355 ESPIDKVQAFNNTLEKYGT---DRKNLSVYIGDSVGDLLCLLEADIGIVIGS 403 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~---~~~~~vIyIGDs~tDl~~l~~Adigiv~~~ 403 (463)
..+.+|...++.+++.++. + ..+++++|||.||++|++.|++||+|++
T Consensus 183 ~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~~ 233 (271)
T PRK03669 183 DASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVKG 233 (271)
T ss_pred cCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEecC
Confidence 3467899999999988776 3 5789999999999999999999999984
No 134
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=97.36 E-value=0.0005 Score=71.94 Aligned_cols=110 Identities=19% Similarity=0.225 Sum_probs=78.0
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 365 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 365 (463)
.+.||.+|-|..+|+-| ++.+.+++-. .---..+..+.|+++ .++ -+++.+|.+.++
T Consensus 447 ivK~Gi~ERf~elR~Mg---IkTvM~TGDN-~~TAa~IA~EAGVDd--fiA-----------------eatPEdK~~~I~ 503 (681)
T COG2216 447 IVKPGIKERFAELRKMG---IKTVMITGDN-PLTAAAIAAEAGVDD--FIA-----------------EATPEDKLALIR 503 (681)
T ss_pred hcchhHHHHHHHHHhcC---CeEEEEeCCC-HHHHHHHHHHhCchh--hhh-----------------cCChHHHHHHHH
Confidence 68899999999999999 9999999752 322333344556532 122 245678999999
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhhhhCceeeecCchhhH
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVK 427 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~~~~~~ 427 (463)
+...+ +.-+-+.|||.||-++|..||+|++|+....-+ +..-+.+-+++...+
T Consensus 504 ~eQ~~-----grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAA----kEAaNMVDLDS~PTK 556 (681)
T COG2216 504 QEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA----KEAANMVDLDSNPTK 556 (681)
T ss_pred HHHhc-----CcEEEEcCCCCCcchhhhhcchhhhhccccHHH----HHhhcccccCCCccc
Confidence 87763 345668999999999999999999998875322 233367777764433
No 135
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.36 E-value=0.00069 Score=59.26 Aligned_cols=94 Identities=12% Similarity=-0.017 Sum_probs=63.5
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceE--EeeceEEccceeeccccccCCCCcchHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNV--HANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I--~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
.+.||+.++|+.++++| ++++|+|.++...++..+++..+. ...+ +...+ +....+. ...|.+.
T Consensus 29 ~~~~gv~e~L~~Lk~~g---~~l~i~Sn~~~~~~~~~~l~~~~~-~~~i~~l~~~f---~~~~~~~-------~~pkp~~ 94 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNG---FLLALASYNDDPHVAYELLKIFED-FGIIFPLAEYF---DPLTIGY-------WLPKSPR 94 (128)
T ss_pred HHHHHHHHHHHHHHHCC---eEEEEEeCCCCHHHHHHHHHhccc-cccchhhHhhh---hhhhhcC-------CCcHHHH
Confidence 78999999999999999 999999998557888888876541 0000 01100 1111111 0126666
Q ss_pred HHHHHHHhC--CCCCceEEEEcCCcccHHHhHh
Q 012437 364 FNNTLEKYG--TDRKNLSVYIGDSVGDLLCLLE 394 (463)
Q Consensus 364 l~~l~~~~~--~~~~~~vIyIGDs~tDl~~l~~ 394 (463)
+...+...+ . .+.+++||||+..|+..+..
T Consensus 95 ~~~a~~~lg~~~-~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 95 LVEIALKLNGVL-KPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHhcCCC-CcceEEEECCCHhHHHHHHh
Confidence 777777666 5 36899999999999877653
No 136
>PLN02887 hydrolase family protein
Probab=97.35 E-value=0.00022 Score=77.66 Aligned_cols=56 Identities=20% Similarity=0.293 Sum_probs=48.8
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-ChhHHHHh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 411 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~~~L~~~~ 411 (463)
..+..|...++.+++.++.+ ..++++||||.||++|++.||+||+|++ .+.+++.|
T Consensus 503 p~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~A 559 (580)
T PLN02887 503 PPGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVA 559 (580)
T ss_pred cCCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhC
Confidence 45678999999999988874 5799999999999999999999999988 46777766
No 137
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.27 E-value=0.00034 Score=67.43 Aligned_cols=58 Identities=22% Similarity=0.239 Sum_probs=48.5
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-ChhHHHHhhh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQ 413 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~~~L~~~~~~ 413 (463)
..+.+|...++.+++..+.+ ..+++++|||.||+.|+..+++||++++ .+.+++.+..
T Consensus 155 ~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~ 213 (236)
T TIGR02471 155 PLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQ 213 (236)
T ss_pred eCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcC
Confidence 34568999999999887753 4689999999999999999999999977 4678877654
No 138
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.26 E-value=0.00087 Score=66.90 Aligned_cols=110 Identities=4% Similarity=-0.141 Sum_probs=66.8
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
...+.||+.++++.++++| ++++|+|+.- ....+..++.+++.. ++...+...+ ....+......+..+...
T Consensus 185 ~~~~~~~~~~~l~~l~~~g---~~i~i~T~r~-~~~~~~~l~~l~~~~--~~f~~i~~~~--~~~~~~~~~~~~kp~p~~ 256 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAG---YEIIVVSGRD-GVCEEDTVEWLRQTD--IWFDDLIGRP--PDMHFQREQGDKRPDDVV 256 (300)
T ss_pred cCCCChhHHHHHHHHHhCC---CEEEEEeCCC-hhhHHHHHHHHHHcC--CchhhhhCCc--chhhhcccCCCCCCcHHH
Confidence 3478999999999999998 9999999984 677888887766432 1111111101 000011011011112233
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
+...+.+.+...+..++||||+.+|+.+++.||+.++.
T Consensus 257 ~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~ 294 (300)
T PHA02530 257 KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQ 294 (300)
T ss_pred HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEE
Confidence 33333333222247899999999999999999996543
No 139
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.25 E-value=0.00033 Score=68.44 Aligned_cols=49 Identities=29% Similarity=0.260 Sum_probs=41.7
Q ss_pred CCcchHHHHHHHHHHhCCC-CCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 356 SPIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~-~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
.+..|...++.+++.++.+ ...+++++|||.||++|+..||+||+|++.
T Consensus 173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 3567999999998877652 147899999999999999999999999875
No 140
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.20 E-value=0.0012 Score=59.09 Aligned_cols=91 Identities=19% Similarity=0.348 Sum_probs=68.8
Q ss_pred HHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCC
Q 012437 295 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 374 (463)
Q Consensus 295 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~ 374 (463)
++.+.+.| +++.|+|+-- +..++.-++.+|+.. .+.|. .+|..++.+++.+.+.+
T Consensus 44 ik~l~~~G---i~vAIITGr~-s~ive~Ra~~LGI~~-------------~~qG~--------~dK~~a~~~L~~~~~l~ 98 (170)
T COG1778 44 IKLLLKSG---IKVAIITGRD-SPIVEKRAKDLGIKH-------------LYQGI--------SDKLAAFEELLKKLNLD 98 (170)
T ss_pred HHHHHHcC---CeEEEEeCCC-CHHHHHHHHHcCCce-------------eeech--------HhHHHHHHHHHHHhCCC
Confidence 44556667 9999999875 567777777777643 23342 47999999999998874
Q ss_pred CCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHHh
Q 012437 375 RKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG 411 (463)
Q Consensus 375 ~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~~ 411 (463)
..++.||||-.+|+++++.++++++..+. +-+++.|
T Consensus 99 -~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a 135 (170)
T COG1778 99 -PEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRA 135 (170)
T ss_pred -HHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhh
Confidence 68999999999999999999988777553 4444333
No 141
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=97.19 E-value=0.0015 Score=76.50 Aligned_cols=111 Identities=19% Similarity=0.177 Sum_probs=72.2
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC--cceE-Eeec------------------------
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNV-HANE------------------------ 338 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~--~~~I-~aN~------------------------ 338 (463)
++|||..+.++.|++.| +++.++|+- +.+-...+.++.|+- +..+ +-+.
T Consensus 631 ~lq~~v~etI~~L~~AG---Ikv~mlTGD-~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~ 706 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAG---IKIWVLTGD-KVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEF 706 (1057)
T ss_pred hhhhccHHHHHHHHHCC---CeEEEEcCC-cHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999 999999975 244455555555541 1111 1111
Q ss_pred ----------eEEccce----eecc----cc-----cc-----CCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHH
Q 012437 339 ----------FSFKESI----STGE----II-----EK-----VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLL 390 (463)
Q Consensus 339 ----------l~~~~g~----~tG~----~~-----~~-----~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~ 390 (463)
+..++.. .... +. ++ -+++.+|.++++.+++.. +..+.++|||.||.+
T Consensus 707 ~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~----~~~vl~iGDG~ND~~ 782 (1057)
T TIGR01652 707 NNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKST----GKTTLAIGDGANDVS 782 (1057)
T ss_pred hhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcC----CCeEEEEeCCCccHH
Confidence 1122110 0000 10 11 145678998888776531 356789999999999
Q ss_pred HhHhcCeeEEEcCC
Q 012437 391 CLLEADIGIVIGSS 404 (463)
Q Consensus 391 ~l~~Adigiv~~~~ 404 (463)
|++.|||||.+...
T Consensus 783 mlk~AdVGIgi~g~ 796 (1057)
T TIGR01652 783 MIQEADVGVGISGK 796 (1057)
T ss_pred HHhhcCeeeEecCh
Confidence 99999999988554
No 142
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.18 E-value=0.00051 Score=65.36 Aligned_cols=45 Identities=29% Similarity=0.271 Sum_probs=39.6
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
.+..|...++.+++..+.+ ..++++||||.||++|+..||+||++
T Consensus 176 ~~~~Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEEe
Confidence 4556999999999888764 67899999999999999999999987
No 143
>PLN03190 aminophospholipid translocase; Provisional
Probab=97.12 E-value=0.0023 Score=75.25 Aligned_cols=46 Identities=22% Similarity=0.401 Sum_probs=36.3
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
+++..|.++++.+++.. +..+.+||||.||.+|++.|||||-+..+
T Consensus 854 ~sP~QKa~IV~~vk~~~----~~vtlaIGDGaNDv~mIq~AdVGIGIsG~ 899 (1178)
T PLN03190 854 VAPLQKAGIVALVKNRT----SDMTLAIGDGANDVSMIQMADVGVGISGQ 899 (1178)
T ss_pred CCHHHHHHHHHHHHhcC----CcEEEEECCCcchHHHHHhcCeeeeecCc
Confidence 45678988888666531 24578999999999999999999987554
No 144
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.06 E-value=0.0007 Score=66.01 Aligned_cols=56 Identities=21% Similarity=0.366 Sum_probs=46.0
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHHh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVG 411 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~~ 411 (463)
..+..|...++.+++.++.+ ..++++||||.||++|+..|++++++++. +.+++.+
T Consensus 184 ~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a 240 (256)
T TIGR00099 184 AKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALA 240 (256)
T ss_pred CCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhC
Confidence 34668999999999887763 57899999999999999999999999663 4555444
No 145
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.92 E-value=0.0083 Score=55.64 Aligned_cols=105 Identities=17% Similarity=0.230 Sum_probs=68.7
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEcc--cc-CH-----------HHHHHHHHhcCCCcceEEeeceEEccceeecc
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSY--CW-CG-----------DLIRASFSSAGLNALNVHANEFSFKESISTGE 349 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~--g~-s~-----------~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~ 349 (463)
.+.+.||..+.+..+++.| +.++|||- |. .+ ..+...|+..|.....|+.-. ..
T Consensus 29 ~~~~~~g~i~al~~l~~~g---y~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cp---------h~ 96 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAG---YKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCP---------HH 96 (181)
T ss_pred HhccCccHHHHHHHHHhCC---CeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECC---------CC
Confidence 4678999999999999988 99999995 11 11 123334444443211222111 00
Q ss_pred ccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe-eEEE
Q 012437 350 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 401 (463)
Q Consensus 350 ~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi-giv~ 401 (463)
....|.|---|...+.+++++++.+ ....++|||..+|+.++..+++ |+.+
T Consensus 97 p~~~c~cRKP~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~ 148 (181)
T COG0241 97 PEDNCDCRKPKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLV 148 (181)
T ss_pred CCCCCcccCCChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEE
Confidence 1111333334677888898888764 5789999999999999999998 5555
No 146
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.89 E-value=0.0014 Score=64.81 Aligned_cols=51 Identities=29% Similarity=0.305 Sum_probs=43.1
Q ss_pred CCcchHHHHHHHHHHhCCCCC-ceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHH
Q 012437 356 SPIDKVQAFNNTLEKYGTDRK-NLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLR 408 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~-~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~ 408 (463)
.+ .|...++.+.+..+.+ . .++++||||.||++|+..|+++++|++. +.++
T Consensus 188 ~~-~Kg~al~~l~~~~~i~-~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQ-DGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CC-CHHHHHHHHHHHHhcc-CCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 35 7999999998877763 6 8999999999999999999999999874 4444
No 147
>PLN02382 probable sucrose-phosphatase
Probab=96.87 E-value=0.0016 Score=68.29 Aligned_cols=57 Identities=23% Similarity=0.226 Sum_probs=46.6
Q ss_pred CCCcchHHHHHHHHHHh---CCCCCceEEEEcCCcccHHHhHhcC-eeEEEcCC-hhHHHHhh
Q 012437 355 ESPIDKVQAFNNTLEKY---GTDRKNLSVYIGDSVGDLLCLLEAD-IGIVIGSS-SSLRRVGS 412 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~---~~~~~~~vIyIGDs~tDl~~l~~Ad-igiv~~~~-~~L~~~~~ 412 (463)
..+.+|...++.+++.+ +. ...+++++|||.||++|+..++ +||+|++. +.+++.+.
T Consensus 171 p~g~sKg~Al~~L~~~~~~~gi-~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~ 232 (413)
T PLN02382 171 PQGAGKGQALAYLLKKLKAEGK-APVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYA 232 (413)
T ss_pred eCCCCHHHHHHHHHHHhhhcCC-ChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHH
Confidence 34667999999999877 54 3578999999999999999999 69999774 66776543
No 148
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.82 E-value=0.012 Score=54.99 Aligned_cols=30 Identities=10% Similarity=0.121 Sum_probs=21.5
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccc
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYC 314 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g 314 (463)
...+++-||+.|.|+.|.+.| ...++||+.
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g---~~~~~Itar 98 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKG---HEIVIITAR 98 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTST---TEEEEEEE-
T ss_pred hcCCCccHHHHHHHHHHHHcC---CcEEEEEec
Confidence 346789999999999999987 677777763
No 149
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.79 E-value=0.0016 Score=62.74 Aligned_cols=46 Identities=28% Similarity=0.338 Sum_probs=38.6
Q ss_pred CcchHHHHHHHHHHhCCC-CCceEEEEcCCcccHHHhHhcCeeEEEc
Q 012437 357 PIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIG 402 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~-~~~~vIyIGDs~tDl~~l~~Adigiv~~ 402 (463)
+..|...++.++...+.. ....++++|||.||++|++.||+||+++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG 225 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence 678999999888776532 2357999999999999999999999874
No 150
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.74 E-value=0.0038 Score=60.76 Aligned_cols=56 Identities=20% Similarity=0.211 Sum_probs=45.9
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHh-cCeeEEEcCC-hhHHHHhh
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE-ADIGIVIGSS-SSLRRVGS 412 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~-Adigiv~~~~-~~L~~~~~ 412 (463)
.+..|...++.++..++.+ ..+++++||+.||+.|++. ++.+|++++. +.+++.+.
T Consensus 164 ~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 164 QGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYD 221 (249)
T ss_pred CCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHH
Confidence 4567999999999887763 5789999999999999998 6679999774 56776654
No 151
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.69 E-value=0.0074 Score=61.15 Aligned_cols=103 Identities=12% Similarity=0.002 Sum_probs=73.0
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh----cCCCcceEEeeceEEccceeeccccccCCCCcchHH
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS----AGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 362 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~----~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 362 (463)
+++|+.++|+.|+++| +.+.|+|.+. ...+..++++ .++.. .+.. +..+ ...|..
T Consensus 32 ~~~~~~e~L~~L~~~G---i~lai~S~n~-~~~a~~~l~~~~~~~~~~~------~f~~---~~~~--------~~pk~~ 90 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQG---FLLALASKND-EDDAKKVFERRKDFILQAE------DFDA---RSIN--------WGPKSE 90 (320)
T ss_pred cHHHHHHHHHHHHhCC---CEEEEEcCCC-HHHHHHHHHhCccccCcHH------HeeE---EEEe--------cCchHH
Confidence 4889999999999999 9999999995 7888888887 33321 1111 0000 124888
Q ss_pred HHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-ChhHHHHh
Q 012437 363 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 411 (463)
Q Consensus 363 ~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~~~L~~~~ 411 (463)
.+.+++++.+.+ ...++||||+..|+.....+...+-+.. +..+.+.+
T Consensus 91 ~i~~~~~~l~i~-~~~~vfidD~~~d~~~~~~~lp~~~~~~~~~~~~~~l 139 (320)
T TIGR01686 91 SLRKIAKKLNLG-TDSFLFIDDNPAERANVKITLPVKTLLCDPAELAAIL 139 (320)
T ss_pred HHHHHHHHhCCC-cCcEEEECCCHHHHHHHHHHCCCCccCCChHHHHHHh
Confidence 888888887763 5789999999999999999875543323 33444443
No 152
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.64 E-value=0.0049 Score=60.15 Aligned_cols=48 Identities=29% Similarity=0.416 Sum_probs=38.6
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
.+..|..+++-++..++.+ ..+++.+|||-||++||..+..||++++.
T Consensus 162 ~~a~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL~~~~~~vvV~Na 209 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIP-PEQVLVAGDSGNDLEMLEGGDHGVVVGNA 209 (247)
T ss_dssp TT-SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHHCCSSEEEE-TTS
T ss_pred CCCCHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHHcCcCCEEEEcCC
Confidence 3456999999999888763 57899999999999999888889999874
No 153
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.52 E-value=0.0055 Score=67.73 Aligned_cols=124 Identities=23% Similarity=0.264 Sum_probs=78.5
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC--cceEEe-eceEEccceeec---ccccc-----C
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN--ALNVHA-NEFSFKESISTG---EIIEK-----V 354 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~--~~~I~a-N~l~~~~g~~tG---~~~~~-----~ 354 (463)
+.|||.++-++.|++.| +.+-.|++.- -.--+.+..+.|+- +....+ ---+|.+ .... ++.++ -
T Consensus 647 PvRPgV~~AV~~Cq~AG---ItVRMVTGDN-I~TAkAIA~eCGILt~~~d~~~lEG~eFr~-~s~ee~~~i~pkl~VlAR 721 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAG---ITVRMVTGDN-INTAKAIARECGILTPGGDFLALEGKEFRE-LSQEERDKIWPKLRVLAR 721 (1034)
T ss_pred CCCCCcHHHHHHHHHcC---cEEEEEeCCc-HHHHHHHHHHcccccCCCccceecchhhhh-cCHHHHHhhhhhheeeec
Confidence 89999999999999999 9999999853 34466666777741 111011 0001110 0000 11122 1
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEE-EEcCCcccHHHhHhcCeeEEEcCChhHHHHhhhhCceeeecCc
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSV-YIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vI-yIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~~ 423 (463)
.++.||.-.++.++.. .+++ .-|||.||-++|+.||||.+|+=... ++|++.. .++=+++
T Consensus 722 SSP~DK~lLVk~L~~~------g~VVAVTGDGTNDaPALkeADVGlAMGIaGT--eVAKEaS-DIIi~DD 782 (1034)
T KOG0204|consen 722 SSPNDKHLLVKGLIKQ------GEVVAVTGDGTNDAPALKEADVGLAMGIAGT--EVAKEAS-DIIILDD 782 (1034)
T ss_pred CCCchHHHHHHHHHhc------CcEEEEecCCCCCchhhhhcccchhccccch--hhhhhhC-CeEEEcC
Confidence 4578999888888852 3455 58999999999999999999976432 2333333 4555543
No 154
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.45 E-value=0.0028 Score=59.45 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=39.2
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEE
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 401 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~ 401 (463)
.+.+|...++.++...+. ...++++||||.||+.|+..++++|+|
T Consensus 160 ~~~~K~~~~~~~~~~~~~-~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 160 AGVDKGSALQALLKELNG-KRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCChHHHHHHHHHHhCC-CHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 567899999999988764 357899999999999999999999875
No 155
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=96.36 E-value=0.011 Score=58.64 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=36.8
Q ss_pred CCCC-hhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc
Q 012437 285 LSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA 331 (463)
Q Consensus 285 i~lr-~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~ 331 (463)
+++| ||+.++|+.|+++| ++++|+|++- .+.+...++..|+..
T Consensus 144 v~irdPgV~EaL~~LkekG---ikLaIaTS~~-Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 144 VRIRDPRIYDSLTELKKRG---CILVLWSYGD-RDHVVESMRKVKLDR 187 (301)
T ss_pred cccCCHHHHHHHHHHHHCC---CEEEEEECCC-HHHHHHHHHHcCCCc
Confidence 3466 88889999999999 9999999984 788889999988754
No 156
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.23 E-value=0.041 Score=53.29 Aligned_cols=89 Identities=17% Similarity=0.247 Sum_probs=57.3
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHH--HHHHhcCCCc---ceEEeeceEEccceeeccccccCCCCc
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR--ASFSSAGLNA---LNVHANEFSFKESISTGEIIEKVESPI 358 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~--~~l~~~gl~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~ 358 (463)
...+.||+.++|++|+++| ++++|+|.+- ..... ..|+++|++. ..|+++. .
T Consensus 22 ~~~~~pga~e~L~~L~~~G---~~~~ivTN~~-~~~~~~~~~L~~~gl~~~~~~~Ii~s~----------~--------- 78 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQG---KPVYFVSNSP-RNIFSLHKTLKSLGINADLPEMIISSG----------E--------- 78 (242)
T ss_pred CCccCccHHHHHHHHHHCC---CEEEEEeCCC-CChHHHHHHHHHCCCCccccceEEccH----------H---------
Confidence 4578999999999999999 9999999874 44444 6778777642 1122211 0
Q ss_pred chHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcC
Q 012437 359 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 396 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Ad 396 (463)
.-...+.+..++.+. .+..+++|||+..|+..+..++
T Consensus 79 ~~~~~l~~~~~~~~~-~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 IAVQMILESKKRFDI-RNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred HHHHHHHhhhhhccC-CCceEEEeCCcccchhhhcCCC
Confidence 011344444333222 2367999999999998775433
No 157
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=96.14 E-value=0.12 Score=50.78 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=72.1
Q ss_pred HHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHH---hcCCCcceE-EeeceEE-----ccceeec
Q 012437 278 IKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS---SAGLNALNV-HANEFSF-----KESISTG 348 (463)
Q Consensus 278 i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~---~~gl~~~~I-~aN~l~~-----~~g~~tG 348 (463)
+........+.+.+.++++.++++| +++..+|... ..+....++ +.|++-..- +.+...+ .+.....
T Consensus 73 i~~~~~~~lie~~~~~~i~~lq~~~---~~v~alT~~~-~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~ 148 (252)
T PF11019_consen 73 IFELRKMELIESDVPNIINSLQNKG---IPVIALTARG-PNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRA 148 (252)
T ss_pred HHhhcceEEcchhHHHHHHHHHHCC---CcEEEEcCCC-hhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCC
Confidence 3444455678889999999999999 9999999986 666665554 345431110 1111100 0100000
Q ss_pred c-cc-c-cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhc
Q 012437 349 E-II-E-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 395 (463)
Q Consensus 349 ~-~~-~-~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A 395 (463)
. +. | -.+++.+|...|..++...+. .+..+|||-|+.-.+..+..|
T Consensus 149 ~~~~~GIlft~~~~KG~~L~~fL~~~~~-~pk~IIfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 149 PSFYDGILFTGGQDKGEVLKYFLDKINQ-SPKKIIFIDDNKENLKSVEKA 197 (252)
T ss_pred ceeecCeEEeCCCccHHHHHHHHHHcCC-CCCeEEEEeCCHHHHHHHHHH
Confidence 0 00 1 125678999999999988765 367999999999888776653
No 158
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=96.11 E-value=0.11 Score=49.81 Aligned_cols=110 Identities=10% Similarity=0.044 Sum_probs=65.8
Q ss_pred HhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEcc-ceeeccccccCCCCcc
Q 012437 281 AGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKE-SISTGEIIEKVESPID 359 (463)
Q Consensus 281 ~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~ 359 (463)
......+.||+.++++.|+.+| +++.++|..- .......++.++- ....+.-....+| .+..|++.+.
T Consensus 87 ~~~~~~~~PGa~kLv~~L~~~g---ip~alat~s~-~~~~~~k~~~~~~-~~~~f~~~v~~d~~~v~~gKP~Pd------ 155 (222)
T KOG2914|consen 87 LFMNSILMPGAEKLVNHLKNNG---IPVALATSST-SASFELKISRHED-IFKNFSHVVLGDDPEVKNGKPDPD------ 155 (222)
T ss_pred hccccccCCcHHHHHHHHHhCC---CCeeEEecCC-cccHHHHHHHhhH-HHHhcCCCeecCCccccCCCCCch------
Confidence 3446789999999999999999 9999999864 3344444444430 0000100000111 2333333321
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
....-.+..+......++.+.|+.+=+.+++.|+.-+++-++
T Consensus 156 ---i~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 156 ---IYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred ---HHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 111112222222237899999999999999999997776555
No 159
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.09 E-value=0.0073 Score=66.33 Aligned_cols=48 Identities=23% Similarity=0.137 Sum_probs=40.5
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEE--cCCcccHHHhHhcCeeEEEcCC
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYI--GDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyI--GDs~tDl~~l~~Adigiv~~~~ 404 (463)
.+.+|..+++.++..++.. ...++.+ |||.||+.||+.||+||+|++.
T Consensus 610 ~gvdKG~AL~~L~e~~gI~-~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLN-FGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCCHHHHHHHHHHHhCCC-ccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 4679999999999887653 3556666 9999999999999999999775
No 160
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=96.02 E-value=0.0068 Score=59.83 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=42.0
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhc----CeeEEEcCCh
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA----DIGIVIGSSS 405 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A----digiv~~~~~ 405 (463)
.+.+|...+++++...+.. ...++|+||+.||..|+..+ ++||.+++..
T Consensus 171 ~g~~Kg~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~ 223 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA 223 (266)
T ss_pred CCCCHHHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC
Confidence 3678999999999887653 46899999999999999999 8899998753
No 161
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=95.89 E-value=0.055 Score=58.41 Aligned_cols=116 Identities=13% Similarity=0.102 Sum_probs=74.1
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccCH------------HHHHHHHHhcCCCcceEEeeceEEccceeeccccccC
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCG------------DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKV 354 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~------------~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~ 354 (463)
+.||+.+.|+.|++.| +.++|+|..- . ..+..+++++|++..-++|-. + +.
T Consensus 198 l~pgV~e~L~~L~~~G---y~IvIvTNQ~-gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~----~----~~----- 260 (526)
T TIGR01663 198 IFPEIPEKLKELEADG---FKICIFTNQG-GIARGKINADDFKAKIEAIVAKLGVPFQVFIAIG----A----GF----- 260 (526)
T ss_pred cccCHHHHHHHHHHCC---CEEEEEECCc-ccccCcccHHHHHHHHHHHHHHcCCceEEEEeCC----C----CC-----
Confidence 6799999999999999 9999999732 2 347788888886522222211 0 00
Q ss_pred CCCcchHHHHHHHHHHhC----CCCCceEEEEcCCcccHHHhHhcCeeEEEcC-ChhHHHHhhhhCceeeecCc
Q 012437 355 ESPIDKVQAFNNTLEKYG----TDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~----~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~~~L~~~~~~~gi~~~p~~~ 423 (463)
+.--+...+..++..++ . ...+++||||..+|+.+...|+- --.+ +.+=+.+|...||+|..-++
T Consensus 261 -~RKP~pGm~~~a~~~~~~~~~I-d~~~S~~VGDaagr~~~g~~ag~--~~~D~s~~D~~FA~n~gi~F~tPee 330 (526)
T TIGR01663 261 -YRKPLTGMWDHLKEEANDGTEI-QEDDCFFVGDAAGRPANGKAAGK--KKKDFSCADRLFAANLGIPFATPEE 330 (526)
T ss_pred -CCCCCHHHHHHHHHhcCcccCC-CHHHeEEeCCcccchHHHHhcCC--CcCCCChhhHHHHHHcCCcccChHH
Confidence 01113345555555443 2 24789999999999998887762 0011 12345677888888885544
No 162
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=95.89 E-value=0.068 Score=51.63 Aligned_cols=92 Identities=12% Similarity=0.116 Sum_probs=54.8
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
..-||+.+|++.++++| +.+++||+--. ...-..-|++.|+... +.+.+.. .+... ......-|..+
T Consensus 115 ~aip~a~~l~~~~~~~G---~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~~l~lr~---~~~~~-~~~~~~yK~~~ 183 (229)
T PF03767_consen 115 PAIPGALELYNYARSRG---VKVFFITGRPESQREATEKNLKKAGFPGW----DHLILRP---DKDPS-KKSAVEYKSER 183 (229)
T ss_dssp EEETTHHHHHHHHHHTT---EEEEEEEEEETTCHHHHHHHHHHHTTSTB----SCGEEEE---ESSTS-S------SHHH
T ss_pred cccHHHHHHHHHHHHCC---CeEEEEecCCchhHHHHHHHHHHcCCCcc----chhcccc---ccccc-cccccccchHH
Confidence 67788999999999999 99999998431 2333444666775431 1222111 01000 11123348777
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHh
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCL 392 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l 392 (463)
...+.++ ...-+.+|||..+|+.-.
T Consensus 184 r~~i~~~----Gy~Ii~~iGD~~~D~~~~ 208 (229)
T PF03767_consen 184 RKEIEKK----GYRIIANIGDQLSDFSGA 208 (229)
T ss_dssp HHHHHHT----TEEEEEEEESSGGGCHCT
T ss_pred HHHHHHc----CCcEEEEeCCCHHHhhcc
Confidence 7777663 123455899999999983
No 163
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.87 E-value=0.14 Score=49.30 Aligned_cols=89 Identities=18% Similarity=0.238 Sum_probs=56.6
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH---HHHHHHhcCCCcceEEeeceEEccceeeccccccCCC-Ccc
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL---IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVES-PID 359 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~---I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~-g~~ 359 (463)
..+.-||+.+|++.++++| +.++++|+-. ... ....|.+.|++.. ..|...+ . ...... ..-
T Consensus 118 ~apaip~al~l~~~l~~~G---~~Vf~lTGR~-e~~r~~T~~nL~~~G~~~~----~~LiLR~-----~-~d~~~~~~~y 183 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELG---IKIFLLSGRW-EELRNATLDNLINAGFTGW----KHLILRG-----L-EDSNKTVVTY 183 (229)
T ss_pred CCCCCHHHHHHHHHHHHCC---CEEEEEcCCC-hHHHHHHHHHHHHcCCCCc----CeeeecC-----C-CCCCchHhHH
Confidence 4588899999999999999 9999999853 333 5566777787541 2222211 0 000001 112
Q ss_pred hHHHHHHHHHHhCCCCCceEE-EEcCCcccHHH
Q 012437 360 KVQAFNNTLEKYGTDRKNLSV-YIGDSVGDLLC 391 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vI-yIGDs~tDl~~ 391 (463)
|..+.+++.++ +.+++ .|||-.+|+.-
T Consensus 184 Ks~~R~~l~~~-----GYrIv~~iGDq~sDl~G 211 (229)
T TIGR01675 184 KSEVRKSLMEE-----GYRIWGNIGDQWSDLLG 211 (229)
T ss_pred HHHHHHHHHhC-----CceEEEEECCChHHhcC
Confidence 77776666652 35555 79999999954
No 164
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=95.56 E-value=0.01 Score=54.16 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=59.0
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccc-eee-ccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKES-IST-GEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g-~~t-G~~~~~~~~g~~K~ 361 (463)
.+..|||+.+||+.|.+. .+++|.|++- ..+.+.+++..+... .++...+ +.+. ..+ |.+ -|
T Consensus 40 ~v~~RPgl~eFL~~l~~~----yei~I~Ts~~-~~yA~~il~~ldp~~-~~f~~~l-~r~~~~~~~~~~--------~K- 103 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW----YELVIFTASL-EEYADPVLDILDRGG-KVISRRL-YRESCVFTNGKY--------VK- 103 (162)
T ss_pred EEEECCCHHHHHHHHHhc----CEEEEEcCCc-HHHHHHHHHHHCcCC-CEEeEEE-EccccEEeCCCE--------Ee-
Confidence 468999999999999875 7999999995 899999998765322 1222221 2111 111 111 11
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 397 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi 397 (463)
.+.. .+. ...++|+|||+..|..+...+++
T Consensus 104 -~L~~----l~~-~~~~vIiVDD~~~~~~~~~~NgI 133 (162)
T TIGR02251 104 -DLSL----VGK-DLSKVIIIDNSPYSYSLQPDNAI 133 (162)
T ss_pred -Echh----cCC-ChhhEEEEeCChhhhccCccCEe
Confidence 1111 111 24689999999999877777765
No 165
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=95.38 E-value=0.22 Score=47.99 Aligned_cols=125 Identities=15% Similarity=0.160 Sum_probs=75.7
Q ss_pred CCHHHHHHHhh--cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH-HHH---HHHhcCCCcceEEeeceEEcccee
Q 012437 273 INLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL-IRA---SFSSAGLNALNVHANEFSFKESIS 346 (463)
Q Consensus 273 i~~~~i~~~~~--~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~-I~~---~l~~~gl~~~~I~aN~l~~~~g~~ 346 (463)
.+.++..++++ ....-||+.||++...++| ..++-||.- ..+- ... -|.+.|++.+. =-.+.+
T Consensus 107 f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~G---g~ifyiSNR-~~~~~~~~T~~nLk~~g~~~~~--~~~~ll----- 175 (274)
T COG2503 107 FTPETWDKWVQAKKSKAVPGAVEFLNYVNSNG---GKIFYISNR-DQENEKDGTIENLKSEGLPQVL--ESHLLL----- 175 (274)
T ss_pred CCccchHHHHhhcccccCccHHHHHHHHHhcC---cEEEEEecc-chhcccchhHHHHHHcCccccc--ccceEE-----
Confidence 34444444433 4577899999999999999 899999964 2322 222 23345654320 000111
Q ss_pred eccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhhhhCceeeecC
Q 012437 347 TGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLY 422 (463)
Q Consensus 347 tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~ 422 (463)
. .....|..+.+.+... ...|.+|||...|+.-....+-- -.....+.++.+.||-.|+-+-
T Consensus 176 -----k--k~~k~Ke~R~~~v~k~-----~~iVm~vGDNl~DF~d~~~k~~~--~eR~Alv~~~~~~FGk~~Ii~p 237 (274)
T COG2503 176 -----K--KDKKSKEVRRQAVEKD-----YKIVMLVGDNLDDFGDNAYKKAE--AERRALVKQNQKKFGKKFIILP 237 (274)
T ss_pred -----e--eCCCcHHHHHHHHhhc-----cceeeEecCchhhhcchhhhhhh--HHHHHHHHHHHHHhCceEEEec
Confidence 0 1122466666665553 35677999999999877766511 0112457888899998888654
No 166
>PTZ00174 phosphomannomutase; Provisional
Probab=95.31 E-value=0.017 Score=56.20 Aligned_cols=54 Identities=11% Similarity=0.127 Sum_probs=41.1
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcC----CcccHHHhHhcCe-eEEEcC-ChhHHHHhhh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGS-SSSLRRVGSQ 413 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGD----s~tDl~~l~~Adi-giv~~~-~~~L~~~~~~ 413 (463)
..+.+|...++.+.+. ..+++++|| +.||++|++.|+. |+.+++ .+.++.+|+-
T Consensus 184 ~~gvsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~ 243 (247)
T PTZ00174 184 PKGWDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKEL 243 (247)
T ss_pred eCCCcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHH
Confidence 3467899999999875 368999999 8999999996643 555644 5677766654
No 167
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=94.82 E-value=0.038 Score=60.05 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=64.6
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH-HHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL-IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~-I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
+.=|.++..-+..++.++ ....|+++. |-++ |+..-.. + +++.|- + ....+.-|++..|+++
T Consensus 710 v~sr~dah~eL~~lR~k~---~~aLvi~G~-Sl~~cl~yye~E--f--~el~~~--------~-~aVv~CRctPtQKA~v 772 (1051)
T KOG0210|consen 710 VTSRGDAHNELNNLRRKT---DCALVIDGE-SLEFCLKYYEDE--F--IELVCE--------L-PAVVCCRCTPTQKAQV 772 (1051)
T ss_pred cCCchHHHHHHHHhhcCC---CcEEEEcCc-hHHHHHHHHHHH--H--HHHHHh--------c-CcEEEEecChhHHHHH
Confidence 455666777777777665 556666653 2222 2221111 0 011110 0 0111123567789998
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC-hhHHHHhhhhCc
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGSQFGV 416 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~-~~L~~~~~~~gi 416 (463)
.+-+.+.. +..+..||||-||.-|+..||+||-+-++ .+=+.+|..|.|
T Consensus 773 ~~llq~~t----~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI 822 (1051)
T KOG0210|consen 773 VRLLQKKT----GKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSI 822 (1051)
T ss_pred HHHHHHhh----CceEEEEcCCCccchheeecccceeeecccccccchhccccH
Confidence 88776653 46788999999999999999998877554 333334445544
No 168
>PLN02423 phosphomannomutase
Probab=94.75 E-value=0.046 Score=53.22 Aligned_cols=53 Identities=15% Similarity=0.093 Sum_probs=43.8
Q ss_pred CCCcchHHHHHHHHHHhCCCCCceEEEEcC----CcccHHHhHhcCe-eEEEcCChhHHHHhhh
Q 012437 355 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSSSSLRRVGSQ 413 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~~~~~~vIyIGD----s~tDl~~l~~Adi-giv~~~~~~L~~~~~~ 413 (463)
..|.+|...++.++ ..++++++|| +.||++|++..++ ++.+.+..-+.+.|.+
T Consensus 185 ~~gvnKg~al~~L~------~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~~~~ 242 (245)
T PLN02423 185 PQGWDKTYCLQFLE------DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQCTA 242 (245)
T ss_pred eCCCCHHHHHHHhc------CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHHHHH
Confidence 45778999999998 1478999999 8999999998777 8888776667767654
No 169
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=94.62 E-value=0.34 Score=44.59 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=66.1
Q ss_pred HHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccceeeccccc-cCCC
Q 012437 280 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESISTGEIIE-KVES 356 (463)
Q Consensus 280 ~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~~tG~~~~-~~~~ 356 (463)
+.++.+.|.|++.+.|+.|+++| +.+.|.|-.+..+..+.+|+.+++... ...... ..|.. .+..
T Consensus 39 ~~g~~v~lypdv~~iL~~L~~~g---v~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~---------~~F~~~eI~~ 106 (169)
T PF12689_consen 39 SRGEEVSLYPDVPEILQELKERG---VKLAVASRTDEPDWARELLKLLEIDDADGDGVPLI---------EYFDYLEIYP 106 (169)
T ss_dssp TT--EE---TTHHHHHHHHHHCT-----EEEEE--S-HHHHHHHHHHTT-C-------------------CCECEEEESS
T ss_pred CCCCEEEeCcCHHHHHHHHHHCC---CEEEEEECCCChHHHHHHHHhcCCCccccccccch---------hhcchhheec
Confidence 34678999999999999999999 999999987778899999998776410 000000 01111 1212
Q ss_pred CcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 357 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
.+|..+++++.+..+. .+..++++=|-..-......-||-.+..++
T Consensus 107 -gsK~~Hf~~i~~~tgI-~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~ 152 (169)
T PF12689_consen 107 -GSKTTHFRRIHRKTGI-PYEEMLFFDDESRNIEVVSKLGVTCVLVPD 152 (169)
T ss_dssp -S-HHHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-EEEE-SS
T ss_pred -CchHHHHHHHHHhcCC-ChhHEEEecCchhcceeeEecCcEEEEeCC
Confidence 2799999999988877 478899999999988888877764444343
No 170
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=93.46 E-value=0.19 Score=39.35 Aligned_cols=41 Identities=27% Similarity=0.408 Sum_probs=31.2
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCC-cccHHHhHhcCe-eEEEcC
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGS 403 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~~Adi-giv~~~ 403 (463)
..+...++..+.+ ..++++|||+ .+|+.+.+.+|+ +|.+..
T Consensus 8 ~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~t 50 (75)
T PF13242_consen 8 GMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLT 50 (75)
T ss_dssp HHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESS
T ss_pred HHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECC
Confidence 4455555555542 5789999999 999999999999 666644
No 171
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=93.44 E-value=0.1 Score=50.61 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=33.4
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhc
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 395 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A 395 (463)
.+.+|...++.+++..+.. ...++||||+.||..|+..+
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~ 202 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVV 202 (244)
T ss_pred CCCCHHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHH
Confidence 3668999999999877652 46899999999999999998
No 172
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=93.35 E-value=0.17 Score=56.41 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=59.6
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEe-eceEEcc--ceeec---cccc-----cC
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSFKE--SISTG---EIIE-----KV 354 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~a-N~l~~~~--g~~tG---~~~~-----~~ 354 (463)
++|+...+-+..|+..| ++++.|++-- .---+.+.++-| |+. +.-.+++ ..... .+.+ -+
T Consensus 590 PPR~~vP~Av~~CrsAG---IkvimVTgdh-piTAkAiA~~vg-----Ii~~~~et~e~~a~r~~~~v~~vn~~~a~a~V 660 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAG---IKVIMVTGDH-PITAKAIAKSVG-----IISEGSETVEDIAKRLNIPVEQVNSRDAKAAV 660 (1019)
T ss_pred CCcccCchhhhhhhhhC---ceEEEEecCc-cchhhhhhhhee-----eecCCchhhhhhHHhcCCcccccCccccceEE
Confidence 78889999999999999 9999998742 222333333333 111 1111110 00000 0000 01
Q ss_pred CCCcc----hHHHHHHHHHHhCC------------------CCCceEE-EEcCCcccHHHhHhcCeeEEEcC
Q 012437 355 ESPID----KVQAFNNTLEKYGT------------------DRKNLSV-YIGDSVGDLLCLLEADIGIVIGS 403 (463)
Q Consensus 355 ~~g~~----K~~~l~~l~~~~~~------------------~~~~~vI-yIGDs~tDl~~l~~Adigiv~~~ 403 (463)
.+|.+ ..+-+.+++..+.. .....+| ..|||+||-++|+.|||||++|=
T Consensus 661 ihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGi 732 (1019)
T KOG0203|consen 661 IHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGI 732 (1019)
T ss_pred EecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeecc
Confidence 22222 22344555543321 0123344 68999999999999999999954
No 173
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=92.86 E-value=0.73 Score=47.17 Aligned_cols=111 Identities=23% Similarity=0.208 Sum_probs=66.9
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhc-C-------CCc--ceEE--eeceEEc-cce-----
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSA-G-------LNA--LNVH--ANEFSFK-ESI----- 345 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~-g-------l~~--~~I~--aN~l~~~-~g~----- 345 (463)
-+...||+.++|+.++++| .++.|+|.+- ..+++.+++.+ | +.. ..|+ ++...|- ++.
T Consensus 182 yv~~~pgl~elL~~Lr~~G---~klfLvTNS~-~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v 257 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHG---KKLFLLTNSD-YDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV 257 (343)
T ss_pred HhccchhHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE
Confidence 4677999999999999999 9999999984 78888888874 4 211 1233 2222221 110
Q ss_pred --eeccccc---------cCCCCcchHHHHHHHHHHhCCCCCceEEEEcCC-cccHHHhH-hcCe-eEEEcC
Q 012437 346 --STGEIIE---------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLL-EADI-GIVIGS 403 (463)
Q Consensus 346 --~tG~~~~---------~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~-~Adi-giv~~~ 403 (463)
.+|.... .+-+| .=...+.+.+. . ...+++||||. .+|+.... .+|. .|++.+
T Consensus 258 ~~~~g~~~~~~~~~l~~g~vY~g-Gn~~~~~~~l~---~-~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 258 DVETGSLKWGEVDGLEPGKVYSG-GSLKQFHELLK---W-RGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred eCCCCcccCCccccccCCCeEeC-CCHHHHHHHHC---C-CCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 1121110 11111 12233444443 2 35789999997 48999887 7887 454533
No 174
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.76 E-value=1.6 Score=43.15 Aligned_cols=91 Identities=18% Similarity=0.139 Sum_probs=52.9
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
..+.-||+.+|++.++++| +.+++||+--. .......|.+.|++.- ..|...+. +.- .+.....-|.
T Consensus 143 ~ApAlp~al~ly~~l~~~G---~kIf~VSgR~e~~r~aT~~NL~kaGy~~~----~~LiLR~~---~D~-~~~~av~yKs 211 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLG---FKIIFLSGRLKDKQAVTEANLKKAGYHTW----EKLILKDP---QDN-SAENAVEYKT 211 (275)
T ss_pred cCCCChHHHHHHHHHHHCC---CEEEEEeCCchhHHHHHHHHHHHcCCCCc----ceeeecCC---CCC-ccchhHHHHH
Confidence 4567789999999999999 99999998531 2233444566776431 22222110 000 0001112355
Q ss_pred HHHHHHHHHhCCCCCceEE-EEcCCcccHH
Q 012437 362 QAFNNTLEKYGTDRKNLSV-YIGDSVGDLL 390 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vI-yIGDs~tDl~ 390 (463)
...+++.++ +.+++ .|||-.+|+.
T Consensus 212 ~~R~~li~e-----GYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 212 AARAKLIQE-----GYNIVGIIGDQWNDLK 236 (275)
T ss_pred HHHHHHHHc-----CceEEEEECCCHHhcc
Confidence 554555542 34555 7999999994
No 175
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.74 E-value=8.1 Score=36.97 Aligned_cols=114 Identities=11% Similarity=0.177 Sum_probs=72.4
Q ss_pred CHHHHHHHhh------cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc--eEEeeceEEccce
Q 012437 274 NLEDIKKAGE------RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL--NVHANEFSFKESI 345 (463)
Q Consensus 274 ~~~~i~~~~~------~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~--~I~aN~l~~~~g~ 345 (463)
+.++..+++. .+.+.+-..++|-.+++++ ..|+|-+. ..-...+|+.+|+.+. .|+|
T Consensus 82 d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~-----k~~FTNa~-k~HA~r~Lk~LGieDcFegii~--------- 146 (244)
T KOG3109|consen 82 DADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR-----KWIFTNAY-KVHAIRILKKLGIEDCFEGIIC--------- 146 (244)
T ss_pred CHHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc-----EEEecCCc-HHHHHHHHHHhChHHhccceeE---------
Confidence 4666666654 3566666789998888653 88999876 4445567777886431 2333
Q ss_pred eeccccccCCCCcch--HHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee-EEEcC
Q 012437 346 STGEIIEKVESPIDK--VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIGS 403 (463)
Q Consensus 346 ~tG~~~~~~~~g~~K--~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig-iv~~~ 403 (463)
.+...+.-.+-.|| .++++...+..+.+.+.+++++-||.+-+...+..|.+ ++++.
T Consensus 147 -~e~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 147 -FETLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGR 206 (244)
T ss_pred -eeccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEe
Confidence 11111100112234 24555556556666678999999999999999999994 44433
No 176
>PLN02580 trehalose-phosphatase
Probab=92.53 E-value=0.18 Score=52.37 Aligned_cols=47 Identities=28% Similarity=0.332 Sum_probs=37.5
Q ss_pred CcchHHHHHHHHHHhCCCCCce--EEEEcCCcccHHHhHh-----cCeeEEEcC
Q 012437 357 PIDKVQAFNNTLEKYGTDRKNL--SVYIGDSVGDLLCLLE-----ADIGIVIGS 403 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~~~~~--vIyIGDs~tDl~~l~~-----Adigiv~~~ 403 (463)
+.+|...++.++...+...... .+||||+.||..|+.. +++||+++.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn 352 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS 352 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec
Confidence 6789999999998776532222 4899999999999996 588888864
No 177
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=92.41 E-value=0.093 Score=61.04 Aligned_cols=46 Identities=26% Similarity=0.413 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCCh
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 405 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~ 405 (463)
++..|..+.+-.++. .+..+.+||||.||..|++.|||||.+...+
T Consensus 778 sPlQKA~Vv~lVk~~----~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~E 823 (1151)
T KOG0206|consen 778 SPLQKALVVKLVKKG----LKAVTLAIGDGANDVSMIQEAHVGVGISGQE 823 (1151)
T ss_pred CHHHHHHHHHHHHhc----CCceEEEeeCCCccchheeeCCcCeeeccch
Confidence 356888888876443 2467899999999999999999999997653
No 178
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=92.35 E-value=0.6 Score=42.99 Aligned_cols=88 Identities=19% Similarity=0.232 Sum_probs=51.4
Q ss_pred HHHHHHHHHHcCCCCCcEEEEccccCH--HHHHHHHH-hcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHH
Q 012437 291 CTTFFQKVVKNENLNANVHVLSYCWCG--DLIRASFS-SAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNT 367 (463)
Q Consensus 291 ~~efl~~l~~~g~~~~~~~IvS~g~s~--~~I~~~l~-~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l 367 (463)
+..++..++++| ..++.|++--.. +-+...|. .+.+.+ -|.+.|.+++- -....+|...++.
T Consensus 119 A~qLI~MHq~RG---D~i~FvTGRt~gk~d~vsk~Lak~F~i~~----m~pv~f~Gdk~-------k~~qy~Kt~~i~~- 183 (237)
T COG3700 119 ARQLIDMHQRRG---DAIYFVTGRTPGKTDTVSKTLAKNFHITN----MNPVIFAGDKP-------KPGQYTKTQWIQD- 183 (237)
T ss_pred HHHHHHHHHhcC---CeEEEEecCCCCcccccchhHHhhcccCC----CcceeeccCCC-------CcccccccHHHHh-
Confidence 456889999999 889999974211 11222222 122211 12333333221 1223457665552
Q ss_pred HHHhCCCCCceEEEEcCCcccHHHhHhcCe-eEEE
Q 012437 368 LEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 401 (463)
Q Consensus 368 ~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi-giv~ 401 (463)
...-|.+|||-+|+.+++.||+ ||-+
T Consensus 184 --------~~~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 184 --------KNIRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred --------cCceEEecCCchhhhHHHhcCccceeE
Confidence 2356899999999999999998 6543
No 179
>COG4996 Predicted phosphatase [General function prediction only]
Probab=92.02 E-value=0.45 Score=41.67 Aligned_cols=44 Identities=11% Similarity=0.122 Sum_probs=30.4
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 329 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl 329 (463)
+..+.|+|.+++++++++..| .-+...|=|. .+-.-.+|+.+++
T Consensus 37 G~ev~L~~~v~~~l~warnsG---~i~~~~sWN~-~~kA~~aLral~~ 80 (164)
T COG4996 37 GREVHLFPDVKETLKWARNSG---YILGLASWNF-EDKAIKALRALDL 80 (164)
T ss_pred CeEEEEcHHHHHHHHHHHhCC---cEEEEeecCc-hHHHHHHHHHhch
Confidence 456899999999999999988 5555554443 2234456676664
No 180
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=91.97 E-value=0.15 Score=49.41 Aligned_cols=40 Identities=25% Similarity=0.306 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCC-cccHHHhHhcCeeEE
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIV 400 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~~Adigiv 400 (463)
...++..+...+.....++++|||+ .+|+.++..+++..+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i 238 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTA 238 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 3455555555543224579999999 699999999998433
No 181
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=90.84 E-value=1.7 Score=39.77 Aligned_cols=90 Identities=14% Similarity=0.159 Sum_probs=62.9
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 364 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 364 (463)
-...|...+.+..+++.| +.++|+|-| +..=+..+.+++|++- |+- -+++. ...+
T Consensus 45 ~~~tpe~~~W~~e~k~~g---i~v~vvSNn-~e~RV~~~~~~l~v~f--i~~----------A~KP~---------~~~f 99 (175)
T COG2179 45 PDATPELRAWLAELKEAG---IKVVVVSNN-KESRVARAAEKLGVPF--IYR----------AKKPF---------GRAF 99 (175)
T ss_pred CCCCHHHHHHHHHHHhcC---CEEEEEeCC-CHHHHHhhhhhcCCce--eec----------ccCcc---------HHHH
Confidence 467778888899999999 999999976 5777888888877532 111 11111 1334
Q ss_pred HHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCeeEE
Q 012437 365 NNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIGIV 400 (463)
Q Consensus 365 ~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adigiv 400 (463)
++.+.+.+.+ .+++++|||.. ||+.....+|+-.+
T Consensus 100 r~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~~tI 135 (175)
T COG2179 100 RRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGMRTI 135 (175)
T ss_pred HHHHHHcCCC-hhHEEEEcchhhhhhhcccccCcEEE
Confidence 4455555553 58999999995 99999999998433
No 182
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=90.54 E-value=0.25 Score=55.83 Aligned_cols=47 Identities=21% Similarity=0.257 Sum_probs=38.5
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhc---CeeEEEcCCh
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA---DIGIVIGSSS 405 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~A---digiv~~~~~ 405 (463)
.+.+|...++.++... ....++++||+.||..|++.+ +++|.+++++
T Consensus 654 ~~vnKG~al~~ll~~~---~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 654 AGVNKGRAVRRLLEAG---PYDFVLAIGDDTTDEDMFRALPETAITVKVGPGE 703 (726)
T ss_pred CCCCHHHHHHHHHhcC---CCCEEEEECCCCChHHHHHhcccCceEEEECCCC
Confidence 3568999999998732 246899999999999999986 5788888764
No 183
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=90.27 E-value=0.67 Score=46.34 Aligned_cols=44 Identities=9% Similarity=0.110 Sum_probs=38.6
Q ss_pred cCCCC-hhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCc
Q 012437 284 RLSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNA 331 (463)
Q Consensus 284 ~i~lr-~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~ 331 (463)
.+++| ||+.++|+.|+++| ++++|+|.| +.+.++..++..|+..
T Consensus 145 ~v~irdp~V~EtL~eLkekG---ikLaIvTNg-~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 145 PVRIRDPFVYDSLDELKERG---CVLVLWSYG-NREHVVHSLKETKLEG 189 (303)
T ss_pred ccccCChhHHHHHHHHHHCC---CEEEEEcCC-ChHHHHHHHHHcCCCc
Confidence 46788 99999999999999 999999988 4788999999988754
No 184
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=89.73 E-value=1.1 Score=40.59 Aligned_cols=85 Identities=15% Similarity=0.246 Sum_probs=46.7
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEcc--ccCH-----------HHHHHHHHhcCCCcceEEeeceEEccceeecccccc
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSY--CWCG-----------DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEK 353 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~--g~s~-----------~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~ 353 (463)
+.|++.+.|+.+.+.| +.++|||- |... .-|..+++..+++ +.+++-.- ...+.+|
T Consensus 30 ~~~~v~~~L~~l~~~G---y~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip-~~~~~a~~-------~d~~RKP 98 (159)
T PF08645_consen 30 FPPGVPEALRELHKKG---YKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP-IQVYAAPH-------KDPCRKP 98 (159)
T ss_dssp C-TTHHHHHHHHHHTT---EEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS--EEEEECGC-------SSTTSTT
T ss_pred cchhHHHHHHHHHhcC---CeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc-eEEEecCC-------CCCCCCC
Confidence 4567889999999999 99999994 3322 2355556666654 23333110 0111111
Q ss_pred CCCCcchHHHHHHHHHHhCC---CCCceEEEEcCCccc
Q 012437 354 VESPIDKVQAFNNTLEKYGT---DRKNLSVYIGDSVGD 388 (463)
Q Consensus 354 ~~~g~~K~~~l~~l~~~~~~---~~~~~vIyIGDs~tD 388 (463)
+...+..+..+++. ....+++||||..+|
T Consensus 99 ------~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 99 ------NPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ------SSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ------chhHHHHHHHhccccccccccceEEEeccCCC
Confidence 22445555554432 124689999998555
No 185
>PLN02645 phosphoglycolate phosphatase
Probab=88.72 E-value=2.6 Score=42.52 Aligned_cols=87 Identities=21% Similarity=0.169 Sum_probs=52.1
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHH
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 363 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 363 (463)
.+.||..++|+.|+++| .+++++|.+-+ ..-+..-|+++|++. . .+.+++.. ..
T Consensus 44 ~~~~ga~e~l~~lr~~g---~~~~~~TN~~~~~~~~~~~~l~~lGi~~--------~-~~~I~ts~------------~~ 99 (311)
T PLN02645 44 KLIEGVPETLDMLRSMG---KKLVFVTNNSTKSRAQYGKKFESLGLNV--------T-EEEIFSSS------------FA 99 (311)
T ss_pred ccCcCHHHHHHHHHHCC---CEEEEEeCCCCCCHHHHHHHHHHCCCCC--------C-hhhEeehH------------HH
Confidence 45699999999999999 99999998631 222333445666521 0 01222211 12
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 397 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi 397 (463)
+..+++..+.. ....+|++++.+|...++.+|+
T Consensus 100 ~~~~l~~~~~~-~~~~V~viG~~~~~~~l~~~Gi 132 (311)
T PLN02645 100 AAAYLKSINFP-KDKKVYVIGEEGILEELELAGF 132 (311)
T ss_pred HHHHHHhhccC-CCCEEEEEcCHHHHHHHHHCCC
Confidence 22333322211 1245888888889999988876
No 186
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=87.95 E-value=0.43 Score=54.16 Aligned_cols=44 Identities=25% Similarity=0.314 Sum_probs=35.5
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
++.+|.+.+.++.+ .++.+-+.|||.||.-+|++||+||-+...
T Consensus 837 sP~qK~~Lie~lQk-----l~y~VgfCGDGANDCgALKaAdvGISLSea 880 (1140)
T KOG0208|consen 837 SPDQKAELIEALQK-----LGYKVGFCGDGANDCGALKAADVGISLSEA 880 (1140)
T ss_pred CchhHHHHHHHHHh-----cCcEEEecCCCcchhhhhhhcccCcchhhh
Confidence 45678887777765 246778999999999999999999988553
No 187
>PTZ00445 p36-lilke protein; Provisional
Probab=87.50 E-value=3.5 Score=39.29 Aligned_cols=109 Identities=12% Similarity=0.242 Sum_probs=70.4
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHH----------------HHHHHHHhcCC--CcceEEeeceE-Ecc-ce
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD----------------LIRASFSSAGL--NALNVHANEFS-FKE-SI 345 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~----------------~I~~~l~~~gl--~~~~I~aN~l~-~~~-g~ 345 (463)
.++|.+..+++.+++.| +++.||+-+ +. +|+..|+.-+. ....++|=-.. +++ ..
T Consensus 75 ~~tpefk~~~~~l~~~~---I~v~VVTfS--d~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~ 149 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSN---IKISVVTFS--DKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSD 149 (219)
T ss_pred cCCHHHHHHHHHHHHCC---CeEEEEEcc--chhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhh
Confidence 47888999999999988 999999863 33 66777664322 11233331111 111 01
Q ss_pred eeccccccCC--CCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCe-eEEEcC
Q 012437 346 STGEIIEKVE--SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGS 403 (463)
Q Consensus 346 ~tG~~~~~~~--~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adi-giv~~~ 403 (463)
+.. . .+. ...-|.-.+++++++.+.. +.++++|=|+..-+.++...|+ ++.+.+
T Consensus 150 y~~-~--gl~KPdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 150 YRP-L--GLDAPMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred hhh-h--cccCCCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 110 0 111 2224556779999888774 6899999999999999999999 666643
No 188
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=87.49 E-value=0.53 Score=52.52 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=31.2
Q ss_pred chHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 359 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
.|..++..+.+ .++.+++.|||.||.-+|++|++||++-++
T Consensus 794 QKE~ii~tlK~-----~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 794 QKEFIITTLKK-----LGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred hHHHHHHHHHh-----cCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 34444444443 257899999999999999999999998554
No 189
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=85.26 E-value=0.56 Score=45.92 Aligned_cols=41 Identities=24% Similarity=0.353 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCe-eEEE
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 401 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adi-giv~ 401 (463)
+...++..+.+.+. ...++++|||+. +|+.++..+|+ .|.+
T Consensus 181 ~p~~~~~~~~~~~~-~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 223 (257)
T TIGR01458 181 SKTFFLEALRATGC-EPEEAVMIGDDCRDDVGGAQDCGMRGIQV 223 (257)
T ss_pred CHHHHHHHHHHhCC-ChhhEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 34566666666554 357899999996 99999999999 4555
No 190
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=84.80 E-value=0.8 Score=43.67 Aligned_cols=44 Identities=27% Similarity=0.222 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHhCCCCCce-EEEEcCCcccHHHhHhcCeeEEEcC
Q 012437 360 KVQAFNNTLEKYGTDRKNL-SVYIGDSVGDLLCLLEADIGIVIGS 403 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~-vIyIGDs~tDl~~l~~Adigiv~~~ 403 (463)
|.++.+-++..+......+ ++.+|||.||++++...|..++++.
T Consensus 192 Kg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV~~ 236 (274)
T COG3769 192 KGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIVKG 236 (274)
T ss_pred ccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheeecc
Confidence 6655555554332222344 7789999999999999999888864
No 191
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=83.98 E-value=0.63 Score=46.04 Aligned_cols=39 Identities=15% Similarity=0.316 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCC-cccHHHhHhcCe-eEEE
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVI 401 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~~Adi-giv~ 401 (463)
..+...++..+. ...++++|||+ .+|+.+++.|++ .|.+
T Consensus 206 ~~~~~~~~~~~~-~~~~~lmIGD~~~tDI~~A~~aGi~si~V 246 (279)
T TIGR01452 206 YMFECITENFSI-DPARTLMVGDRLETDILFGHRCGMTTVLV 246 (279)
T ss_pred HHHHHHHHHhCC-ChhhEEEECCChHHHHHHHHHcCCcEEEE
Confidence 455555555554 35789999999 599999999999 4444
No 192
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=82.41 E-value=1.3 Score=50.77 Aligned_cols=40 Identities=18% Similarity=0.117 Sum_probs=31.7
Q ss_pred CCcchHHHHHHHHHH---hCCCCCceEEEEcCCcccHHHhHhcC
Q 012437 356 SPIDKVQAFNNTLEK---YGTDRKNLSVYIGDSVGDLLCLLEAD 396 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~---~~~~~~~~vIyIGDs~tDl~~l~~Ad 396 (463)
.+.+|..+++.+++. .+. ..+.++++||+.||..|+..++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~-~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGM-LPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCC-CcccEEEEcCCccHHHHHHHhh
Confidence 466899999998753 232 2467999999999999999875
No 193
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=80.14 E-value=9.2 Score=36.02 Aligned_cols=40 Identities=10% Similarity=0.151 Sum_probs=34.6
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 329 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl 329 (463)
...|||+.+||+.+.++ .+++|.|++ +..++..++...++
T Consensus 44 ~~kRP~l~eFL~~~~~~----feIvVwTAa-~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYED----YDIVIWSAT-SMKWIEIKMTELGV 83 (195)
T ss_pred EEeCCCHHHHHHHHHhC----CEEEEEecC-CHHHHHHHHHHhcc
Confidence 46899999999999985 899999998 48899999887654
No 194
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=79.55 E-value=1.4 Score=48.23 Aligned_cols=109 Identities=19% Similarity=0.227 Sum_probs=65.2
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEe-eceEEc--cceeec----ccc----c-c
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHA-NEFSFK--ESISTG----EII----E-K 353 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~a-N~l~~~--~g~~tG----~~~----~-~ 353 (463)
++|..-.+.+.....-| ..+-++++-= -.+-.+.-+++|.. .++|- ..+.-. |+...| .+. + -
T Consensus 492 pprhdsa~tirral~lG---v~Vkmitgdq-laI~keTgrrlgmg-tnmypss~llG~~~~~~~~~~~v~elie~adgfA 566 (942)
T KOG0205|consen 492 PPRHDSAETIRRALNLG---VNVKMITGDQ-LAIAKETGRRLGMG-TNMYPSSALLGLGKDGSMPGSPVDELIEKADGFA 566 (942)
T ss_pred CCccchHHHHHHHHhcc---ceeeeecchH-HHHHHhhhhhhccc-cCcCCchhhccCCCCCCCCCCcHHHHhhhccCcc
Confidence 45777778887777667 8899999742 23344444555532 12221 111111 111111 000 0 1
Q ss_pred CCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCC
Q 012437 354 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 404 (463)
Q Consensus 354 ~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~ 404 (463)
...+..|.++++.+..+ ...+-..|||+||-++++.||+||++.+.
T Consensus 567 gVfpehKy~iV~~Lq~r-----~hi~gmtgdgvndapaLKkAdigiava~a 612 (942)
T KOG0205|consen 567 GVFPEHKYEIVKILQER-----KHIVGMTGDGVNDAPALKKADIGIAVADA 612 (942)
T ss_pred ccCHHHHHHHHHHHhhc-----CceecccCCCcccchhhcccccceeeccc
Confidence 23456899999887763 23455899999999999999999999665
No 195
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=77.25 E-value=8.9 Score=32.07 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=44.1
Q ss_pred cEEEEccc-cC-HHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcC
Q 012437 307 NVHVLSYC-WC-GDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD 384 (463)
Q Consensus 307 ~~~IvS~g-~s-~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGD 384 (463)
+++=||++ |. -.++..+++.+|++.-.++-..+ ++..++-+.. .....|...+++++.... ..+.|.|||
T Consensus 1 pf~YvS~SPwnly~~l~~Fl~~~~~P~G~~~Lr~~---~~~~~~~~~~--~~~~~K~~~i~~i~~~fP---~~kfiLIGD 72 (100)
T PF09949_consen 1 PFFYVSNSPWNLYPFLRDFLRRNGFPAGPLLLRDY---GPSLSGLFKS--GAEEHKRDNIERILRDFP---ERKFILIGD 72 (100)
T ss_pred CEEEEcCCHHHHHHHHHHHHHhcCCCCCceEcccC---CccccccccC--CchhHHHHHHHHHHHHCC---CCcEEEEee
Confidence 35566764 20 24477777777776544554443 1111221111 111469999999998763 468999999
Q ss_pred Cc-ccHH
Q 012437 385 SV-GDLL 390 (463)
Q Consensus 385 s~-tDl~ 390 (463)
|- .|.+
T Consensus 73 sgq~Dpe 79 (100)
T PF09949_consen 73 SGQHDPE 79 (100)
T ss_pred CCCcCHH
Confidence 74 4543
No 196
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=77.24 E-value=2.7 Score=37.60 Aligned_cols=40 Identities=13% Similarity=0.277 Sum_probs=32.2
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcC
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAG 328 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~g 328 (463)
.+.+|||+.+||+.+.+. .+++|.|++ +..+.+.++....
T Consensus 34 ~v~~RP~l~~FL~~l~~~----~ev~i~T~~-~~~ya~~v~~~ld 73 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH----YEVVIWTSA-SEEYAEPVLDALD 73 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH----CEEEEE-SS--HHHHHHHHHHHT
T ss_pred eEeeCchHHHHHHHHHHh----ceEEEEEee-hhhhhhHHHHhhh
Confidence 468899999999999765 799999999 5899999988754
No 197
>PRK10444 UMP phosphatase; Provisional
Probab=76.97 E-value=4.1 Score=39.71 Aligned_cols=44 Identities=20% Similarity=0.326 Sum_probs=33.4
Q ss_pred CcchHHHHHHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCe-eEEE
Q 012437 357 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 401 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adi-giv~ 401 (463)
|--+...++..++..+. ...++++|||+. +|+.++..+++ .+.+
T Consensus 173 gKP~~~~~~~~~~~~~~-~~~~~v~IGD~~~tDi~~A~~~G~~~vlV 218 (248)
T PRK10444 173 GKPSPWIIRAALNKMQA-HSEETVIVGDNLRTDILAGFQAGLETILV 218 (248)
T ss_pred CCCCHHHHHHHHHHcCC-CcccEEEECCCcHHHHHHHHHcCCCEEEE
Confidence 33455677777766654 357899999997 99999999999 4555
No 198
>PLN03017 trehalose-phosphatase
Probab=75.80 E-value=3.4 Score=42.69 Aligned_cols=46 Identities=30% Similarity=0.394 Sum_probs=35.4
Q ss_pred CcchHHHHHHHHHHhCCCC--CceEEEEcCCcccHHHhHhc-----CeeEEEc
Q 012437 357 PIDKVQAFNNTLEKYGTDR--KNLSVYIGDSVGDLLCLLEA-----DIGIVIG 402 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~~--~~~vIyIGDs~tDl~~l~~A-----digiv~~ 402 (463)
+.+|..+++.++...+... ....+||||-.||-.+++.. ++||.++
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG 333 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS 333 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC
Confidence 5689999999998654321 23589999999999998854 4677776
No 199
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=75.37 E-value=6.7 Score=32.61 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=30.8
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHHhcCCC
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLN 330 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~gl~ 330 (463)
-.+-||+.++++.|+++| .+++++|-+- +..-+...|+..|++
T Consensus 13 ~~~ipga~e~l~~L~~~g---~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 13 NEPIPGAVEALDALRERG---KPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TEE-TTHHHHHHHHHHTT---SEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CCcCcCHHHHHHHHHHcC---CCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 356899999999999999 9999999762 323344455777864
No 200
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=74.89 E-value=24 Score=37.96 Aligned_cols=124 Identities=11% Similarity=-0.001 Sum_probs=78.7
Q ss_pred hhhcCCCCHHHHHHHhhcCCCC---hh-HHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEc
Q 012437 267 SGVLKGINLEDIKKAGERLSLQ---DG-CTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFK 342 (463)
Q Consensus 267 ~~~f~Gi~~~~i~~~~~~i~lr---~G-~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~ 342 (463)
.--|.|+..++++ .++.+.++ ++ -.|-++-.+..+ +.++||+.- ..+++++++.+ +..+.|+..+++..
T Consensus 108 ~v~f~Gl~~~~~~-v~ravLPkf~~~dv~~e~~~v~~~~~----~~~vv~~~P-rvMve~Flkey-l~~d~V~g~El~~~ 180 (525)
T PLN02588 108 MLSFFGVKKESFR-AGKAVLPKYFLEDVGLEMFQVLKRGG----KRVGVSDLP-QVMIDVFLRDY-LEIEVVVGRDMKMV 180 (525)
T ss_pred HHhhcCCcHHHhh-hHHhhccHHHHhhcCHHHHHHHhhcC----cEEEEecCC-HHHHHHHHHHh-cCcceEeeeeEEEe
Confidence 4568899998777 55543211 11 234444444434 566777754 78899999875 45678999999987
Q ss_pred cceeeccccccCCCCcchHHHHHH-HHHHhCCCCCceEEEEcCC---cccHHHhHhcCeeEEEcC
Q 012437 343 ESISTGEIIEKVESPIDKVQAFNN-TLEKYGTDRKNLSVYIGDS---VGDLLCLLEADIGIVIGS 403 (463)
Q Consensus 343 ~g~~tG~~~~~~~~g~~K~~~l~~-l~~~~~~~~~~~vIyIGDs---~tDl~~l~~Adigiv~~~ 403 (463)
.|.+||-.. +.+|.....+ +..+. .......+-+||+ .+|...+..+..+.++..
T Consensus 181 ~g~~tG~~~-----~~~~~~~~~~~~~~~~-~~~~~~~vG~~~~~~~~~~~~f~~~CkE~y~v~~ 239 (525)
T PLN02588 181 GGYYLGIME-----DKKKHELAFDKVVQEE-RLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRN 239 (525)
T ss_pred eeEEEEEEc-----ccchHHHHHHHHhccc-CcccccceeecccCcccccchhHHhCcceEEeCh
Confidence 788888654 4456655444 33211 0012347889998 788887767776666644
No 201
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=73.81 E-value=4.3 Score=36.67 Aligned_cols=42 Identities=14% Similarity=0.009 Sum_probs=36.0
Q ss_pred hcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 012437 283 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 329 (463)
Q Consensus 283 ~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl 329 (463)
..+.+|||+.+||+.+.+. ++++|+|.+- ..+...+++..+.
T Consensus 55 ~~v~~rPgv~efL~~l~~~----yel~I~T~~~-~~yA~~vl~~ldp 96 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL----YEMHVYTMGT-RAYAQAIAKLIDP 96 (156)
T ss_pred EEEEECCCHHHHHHHHHhh----cEEEEEeCCc-HHHHHHHHHHhCc
Confidence 3578999999999999853 8999999995 8999999987653
No 202
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=73.26 E-value=1.8 Score=47.32 Aligned_cols=49 Identities=8% Similarity=0.238 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee----EEEcCChhHH
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG----IVIGSSSSLR 408 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig----iv~~~~~~L~ 408 (463)
|...|..++.-.......-.-.+|.-.||.-.-++.+|+ +.++++..|+
T Consensus 634 KIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~ 686 (738)
T KOG2116|consen 634 KIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVI 686 (738)
T ss_pred hHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCceeh
Confidence 667777777655422122233488888998888888873 3455565444
No 203
>PLN02645 phosphoglycolate phosphatase
Probab=72.74 E-value=5.1 Score=40.37 Aligned_cols=41 Identities=17% Similarity=0.322 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCe-eEEE
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 401 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adi-giv~ 401 (463)
+...++..++..+. ...+++||||+. +|+.+++.||+ .|.+
T Consensus 232 ~p~~~~~a~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~ilV 274 (311)
T PLN02645 232 STFMMDYLANKFGI-EKSQICMVGDRLDTDILFGQNGGCKTLLV 274 (311)
T ss_pred hHHHHHHHHHHcCC-CcccEEEEcCCcHHHHHHHHHcCCCEEEE
Confidence 34566666665554 357899999997 99999999998 4445
No 204
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=72.51 E-value=5.7 Score=38.23 Aligned_cols=41 Identities=17% Similarity=0.273 Sum_probs=29.9
Q ss_pred chHHHHHHHHHHhCCCCCceE-EEEcCCc-ccHHHhHhcCeeEE
Q 012437 359 DKVQAFNNTLEKYGTDRKNLS-VYIGDSV-GDLLCLLEADIGIV 400 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~v-IyIGDs~-tDl~~l~~Adigiv 400 (463)
-+...++...++.+.+ ..++ ++|||+. +|+.++..+++..+
T Consensus 189 P~~~~~~~~~~~~~~~-~~~~~~~IGD~~~~Di~~A~~~G~~~i 231 (236)
T TIGR01460 189 PSPAIYRAALNLLQAR-PERRDVMVGDNLRTDILGAKNAGFDTL 231 (236)
T ss_pred CCHHHHHHHHHHhCCC-CccceEEECCCcHHHHHHHHHCCCcEE
Confidence 3456777777666543 3454 9999998 89999999998433
No 205
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=71.97 E-value=39 Score=31.02 Aligned_cols=98 Identities=13% Similarity=0.032 Sum_probs=55.4
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEcccc------CHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcc
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCW------CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPID 359 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~------s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 359 (463)
.+.|...+.++.+++.+ ....+.|||-+- ...-++.+-+.+|++ ++. ..-.+| .+
T Consensus 59 ~i~~~~~~~~~~l~~~~-~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp---vl~-----------h~~kKP----~~ 119 (168)
T PF09419_consen 59 EIPPEYAEWLNELKKQF-GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP---VLR-----------HRAKKP----GC 119 (168)
T ss_pred cCCHHHHHHHHHHHHHC-CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc---EEE-----------eCCCCC----cc
Confidence 45566667788888775 111599999752 123344444555532 221 000011 23
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCC-cccHHHhHhcCe-eEEEc
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIG 402 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~~Adi-giv~~ 402 (463)
..++++.+..........+++.|||= .||+.+....|. +|++.
T Consensus 120 ~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~ 164 (168)
T PF09419_consen 120 FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVT 164 (168)
T ss_pred HHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEe
Confidence 44444443322111235789999997 489999999994 77764
No 206
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=70.36 E-value=7.7 Score=37.68 Aligned_cols=41 Identities=20% Similarity=0.445 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCCc-ccHHHhHhcCe-eEEE
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 401 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs~-tDl~~l~~Adi-giv~ 401 (463)
+...++..++..+. ...++++|||+. +|+.++..+|+ .+.+
T Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~VGD~~~~Di~~a~~~G~~~v~v 222 (249)
T TIGR01457 180 NAIIMEKAVEHLGT-EREETLMVGDNYLTDIRAGIDAGIDTLLV 222 (249)
T ss_pred hHHHHHHHHHHcCC-CcccEEEECCCchhhHHHHHHcCCcEEEE
Confidence 45677777776654 357899999996 99999999999 4444
No 207
>PLN02151 trehalose-phosphatase
Probab=68.76 E-value=5.7 Score=40.87 Aligned_cols=46 Identities=28% Similarity=0.396 Sum_probs=34.3
Q ss_pred CcchHHHHHHHHHHhCCCC--CceEEEEcCCcccHHHhHhc-----CeeEEEc
Q 012437 357 PIDKVQAFNNTLEKYGTDR--KNLSVYIGDSVGDLLCLLEA-----DIGIVIG 402 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~~--~~~vIyIGDs~tDl~~l~~A-----digiv~~ 402 (463)
+.+|..+++.++...+... ..-++||||-.||-.++... |+||.++
T Consensus 267 ~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg 319 (354)
T PLN02151 267 KWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS 319 (354)
T ss_pred CCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec
Confidence 5689999999997654221 12489999999999998753 5667665
No 208
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=68.74 E-value=2.3 Score=41.11 Aligned_cols=15 Identities=27% Similarity=0.324 Sum_probs=13.3
Q ss_pred CCeEEEcccccceec
Q 012437 161 DRLIIFSDFDLTCTI 175 (463)
Q Consensus 161 ~~~~ii~DFD~TiT~ 175 (463)
++.++++||||||+.
T Consensus 2 ~~~~l~lD~DGTL~~ 16 (244)
T TIGR00685 2 RKRAFFFDYDGTLSE 16 (244)
T ss_pred CcEEEEEecCccccC
Confidence 578899999999995
No 209
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=67.95 E-value=3.7 Score=42.91 Aligned_cols=28 Identities=25% Similarity=0.254 Sum_probs=21.8
Q ss_pred CC-CCeEEEcccccceecccchhHHHHHH
Q 012437 159 AG-DRLIIFSDFDLTCTIVDSSAILAEIA 186 (463)
Q Consensus 159 ~~-~~~~ii~DFD~TiT~~DT~~~la~~~ 186 (463)
|+ .+.+||+|.|||||+.|-..-+-++.
T Consensus 371 wr~n~kiVVsDiDGTITkSD~~Ghv~~mi 399 (580)
T COG5083 371 WRNNKKIVVSDIDGTITKSDALGHVKQMI 399 (580)
T ss_pred EeCCCcEEEEecCCcEEehhhHHHHHHHh
Confidence 44 46699999999999999876655544
No 210
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=66.57 E-value=30 Score=32.27 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=59.8
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchH--
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV-- 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~-- 361 (463)
+-.+.|.+.+++++-++.| .+++|-|+| |-..-+-++. .. .+-.+ ++...|.|+..+ | .|.
T Consensus 101 kahlypDav~~ik~wk~~g---~~vyiYSSG-SV~AQkL~Fg---hs----~agdL---~~lfsGyfDtti--G-~KrE~ 163 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALG---MRVYIYSSG-SVKAQKLFFG---HS----DAGDL---NSLFSGYFDTTI--G-KKRES 163 (229)
T ss_pred ccccCHhHHHHHHHHHHcC---CcEEEEcCC-CchhHHHhhc---cc----ccccH---Hhhhcceeeccc--c-ccccc
Confidence 3589999999999999988 999999998 3222222222 11 01000 112344444211 1 122
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeE
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 399 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigi 399 (463)
.--.++..+.+. ....++++.|-...|.++..+|+..
T Consensus 164 ~SY~kIa~~iGl-~p~eilFLSDn~~EL~AA~~vGl~t 200 (229)
T COG4229 164 QSYAKIAGDIGL-PPAEILFLSDNPEELKAAAGVGLAT 200 (229)
T ss_pred hhHHHHHHhcCC-CchheEEecCCHHHHHHHHhcchhe
Confidence 222345555444 3578999999999999999999843
No 211
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=65.66 E-value=4.1 Score=40.11 Aligned_cols=16 Identities=25% Similarity=0.167 Sum_probs=14.1
Q ss_pred CCCeEEEcccccceec
Q 012437 160 GDRLIIFSDFDLTCTI 175 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~ 175 (463)
.++++|++||||||+.
T Consensus 12 ~~~~li~~D~DGTLl~ 27 (266)
T PRK10187 12 SANYAWFFDLDGTLAE 27 (266)
T ss_pred CCCEEEEEecCCCCCC
Confidence 3578999999999997
No 212
>CHL00168 pbsA heme oxygenase; Provisional
Probab=65.47 E-value=1e+02 Score=29.97 Aligned_cols=103 Identities=18% Similarity=0.159 Sum_probs=57.9
Q ss_pred ccCCChhHHHHHHHHHHHhcCCCcCcCCCCCCCCccchhhhhHHHHHHHHh-HHHHH-------HHHHHHHHhhccCCCC
Q 012437 11 MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP-CMRLY-------AFLGKEFHALLNANEG 82 (463)
Q Consensus 11 ~~~~~~~~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~p-C~~~Y-------~~~~~~~~~~~~~~~~ 82 (463)
..+|+|+++.|.+.+..++..+. . ++.+ |+-.| ..|.+.+.+..... +
T Consensus 95 ~~~p~pa~~~Yv~rI~~~~~~~P--------------------~---~LvAH~YvrYLGdlsGGQiI~k~l~r~~gl~-~ 150 (238)
T CHL00168 95 IIEPSPATKIYVDRIHKISAKKP--------------------E---LLIAHAYTRYLGDLSGGQILKKIAQRAMNLS-D 150 (238)
T ss_pred cCCCChHHHHHHHHHHHHhhcCh--------------------H---HHHHHHHHHHHHhccccHHHHHHHHHHhCCC-C
Confidence 35789999999999999986433 2 3334 55566 22333333333211 1
Q ss_pred cccccccccccCChHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhc
Q 012437 83 NHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFC 140 (463)
Q Consensus 83 ~~~y~~Wi~~y~s~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~ 140 (463)
..--.+-+++.-++-.+.-...++.||++ .+++++++++.+-=..|-.+-.+-|.
T Consensus 151 -~~G~~Fy~F~~i~~~~~fk~~yr~~Ld~l--~l~e~e~~~iI~EA~~AF~lN~~vf~ 205 (238)
T CHL00168 151 -SGGLAFYDFDNIEDDQEFKQIYKAALDNL--PLSDDQIQNIIAEANIAFNLNMKMFQ 205 (238)
T ss_pred -CcCccccCCCCcCcHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222333133456777888888876 57888777766554555554444443
No 213
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=65.11 E-value=70 Score=30.33 Aligned_cols=132 Identities=14% Similarity=0.166 Sum_probs=68.2
Q ss_pred hhHHHHHHHHHHcCCCCCcEEEEccccCHHHHH--HHHHhcCCCcceEEeeceEEccceeeccccc-----cCCCCcchH
Q 012437 289 DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR--ASFSSAGLNALNVHANEFSFKESISTGEIIE-----KVESPIDKV 361 (463)
Q Consensus 289 ~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~--~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~-----~~~~g~~K~ 361 (463)
.+..+.|.++++.+ .+.-+-.+++|. .++-. .+|+-+.-....|+-=-+-|.|-+..|+-.+ .+..|..=.
T Consensus 3 eql~~TFa~aK~en-knaLvtfiTaG~-P~v~~T~kilkglq~gG~dIIELGvPfSDp~ADGPtIq~~n~~aL~ng~tl~ 80 (268)
T KOG4175|consen 3 EQLSETFARAKSEN-KNALVTFITAGD-PDVSTTAKILKGLQSGGSDIIELGVPFSDPLADGPTIQAANRRALLNGTTLN 80 (268)
T ss_pred hHHHHHHHHHHhcC-CceEEEEEecCC-CcHHHHHHHHHHHhcCCcCeEEecCccCccccCCchhhhhHHHHHHcCCcHH
Confidence 45667777777765 445566778886 44322 2222111112344444444544444443221 112222222
Q ss_pred HHHHHHHHHhCCCCCceEEE---------EcCCcccHHHhHhcCe-eEEEcCC-----hhHHHHhhhhCceeeecCc
Q 012437 362 QAFNNTLEKYGTDRKNLSVY---------IGDSVGDLLCLLEADI-GIVIGSS-----SSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIy---------IGDs~tDl~~l~~Adi-giv~~~~-----~~L~~~~~~~gi~~~p~~~ 423 (463)
..++-+...++......+|. +||- +=+.-++.||. |+++-+- ..|+..|+++|++++|+..
T Consensus 81 ~i~emvk~ar~~gvt~PIiLmgYYNPIl~yG~e-~~iq~ak~aGanGfiivDlPpEEa~~~Rne~~k~gislvpLva 156 (268)
T KOG4175|consen 81 SIIEMVKEARPQGVTCPIILMGYYNPILRYGVE-NYIQVAKNAGANGFIIVDLPPEEAETLRNEARKHGISLVPLVA 156 (268)
T ss_pred HHHHHHHHhcccCcccceeeeecccHHHhhhHH-HHHHHHHhcCCCceEeccCChHHHHHHHHHHHhcCceEEEeeC
Confidence 23332222211111122332 4553 44777888888 8777553 2799999999999999963
No 214
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=63.65 E-value=3.5 Score=39.83 Aligned_cols=14 Identities=43% Similarity=0.529 Sum_probs=12.8
Q ss_pred CeEEEcccccceec
Q 012437 162 RLIIFSDFDLTCTI 175 (463)
Q Consensus 162 ~~~ii~DFD~TiT~ 175 (463)
|++|++|+|||+..
T Consensus 1 ~~li~tDlDGTLl~ 14 (249)
T TIGR01485 1 RLLLVSDLDNTLVD 14 (249)
T ss_pred CeEEEEcCCCcCcC
Confidence 57999999999997
No 215
>PLN02580 trehalose-phosphatase
Probab=61.25 E-value=4 Score=42.50 Aligned_cols=16 Identities=31% Similarity=0.615 Sum_probs=14.0
Q ss_pred CCCeEEEcccccceec
Q 012437 160 GDRLIIFSDFDLTCTI 175 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~ 175 (463)
.+++++++||||||+.
T Consensus 117 ~k~~~LfLDyDGTLaP 132 (384)
T PLN02580 117 GKKIALFLDYDGTLSP 132 (384)
T ss_pred cCCeEEEEecCCccCC
Confidence 3688999999999985
No 216
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=61.11 E-value=4.3 Score=37.50 Aligned_cols=17 Identities=12% Similarity=0.046 Sum_probs=14.4
Q ss_pred CCCeEEEcccccceecc
Q 012437 160 GDRLIIFSDFDLTCTIV 176 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~ 176 (463)
+...+|++|+|||||..
T Consensus 19 ~~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 19 ENIRLLICDVDGVFSDG 35 (183)
T ss_pred hCceEEEEcCCeeeecC
Confidence 35679999999999975
No 217
>PLN02423 phosphomannomutase
Probab=60.44 E-value=4.5 Score=39.25 Aligned_cols=18 Identities=28% Similarity=0.134 Sum_probs=14.8
Q ss_pred CCCeEEEcccccceeccc
Q 012437 160 GDRLIIFSDFDLTCTIVD 177 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~D 177 (463)
+++.++++|+||||...|
T Consensus 5 ~~~~i~~~D~DGTLl~~~ 22 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPR 22 (245)
T ss_pred ccceEEEEeccCCCcCCC
Confidence 467788899999999654
No 218
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=59.55 E-value=1.7e+02 Score=28.27 Aligned_cols=138 Identities=14% Similarity=0.123 Sum_probs=70.4
Q ss_pred CCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccc-cCHHHHHHHHHhcCCCcceEEeeceEEccceeecccc
Q 012437 273 INLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYC-WCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII 351 (463)
Q Consensus 273 i~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g-~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~ 351 (463)
++.+++.++.+++.++.=-.+--+.|++ .++.|+-.| . +-.+-..|...|+..+.|+=....-..+...-.+.
T Consensus 5 l~~~~~~rY~Rqi~l~~~g~~~Q~~L~~-----~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~ 78 (245)
T PRK05690 5 LSDEEMLRYNRQIILRGFDFDGQEKLKA-----ARVLVVGLGGL-GCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLH 78 (245)
T ss_pred CCHHHHHHHHHhccchhcCHHHHHHhcC-----CeEEEECCCHH-HHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcC
Confidence 4666667776666543211222334443 467777654 4 44455555556765544433222111111000011
Q ss_pred ccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCccc---HHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceeee
Q 012437 352 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGD---LLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFIP 420 (463)
Q Consensus 352 ~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tD---l~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~p 420 (463)
..-.-|..|.+.+.+.+...+.. -++..+-...+. ...+...| +|+.. + ..+.++|.+++++++-
T Consensus 79 ~~~dvG~~Ka~~a~~~l~~lnp~--v~i~~~~~~i~~~~~~~~~~~~D--iVi~~~D~~~~r~~ln~~~~~~~ip~v~ 152 (245)
T PRK05690 79 DDATIGQPKVESARAALARINPH--IAIETINARLDDDELAALIAGHD--LVLDCTDNVATRNQLNRACFAAKKPLVS 152 (245)
T ss_pred ChhhCCChHHHHHHHHHHHHCCC--CEEEEEeccCCHHHHHHHHhcCC--EEEecCCCHHHHHHHHHHHHHhCCEEEE
Confidence 11123567998888877766642 344444433332 23455677 45533 2 2477889999998874
No 219
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=59.11 E-value=4.5 Score=39.38 Aligned_cols=15 Identities=27% Similarity=0.120 Sum_probs=12.8
Q ss_pred CCeEEEcccccceec
Q 012437 161 DRLIIFSDFDLTCTI 175 (463)
Q Consensus 161 ~~~~ii~DFD~TiT~ 175 (463)
++.+|++|||+|++.
T Consensus 1 ~~~ll~sDlD~Tl~~ 15 (247)
T PF05116_consen 1 PPRLLASDLDGTLID 15 (247)
T ss_dssp -SEEEEEETBTTTBH
T ss_pred CCEEEEEECCCCCcC
Confidence 368999999999993
No 220
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=58.62 E-value=35 Score=33.56 Aligned_cols=41 Identities=7% Similarity=0.172 Sum_probs=29.8
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHHhcCC
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGL 329 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~gl 329 (463)
...||+.++|+.++++| ++++++|.+- +..-+..-++.+|+
T Consensus 18 ~~~~ga~e~l~~L~~~g---~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 18 RVVPGAPELLDRLARAG---KAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred eeCcCHHHHHHHHHHCC---CeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 35688999999999998 9999999863 12223345566775
No 221
>PLN02151 trehalose-phosphatase
Probab=58.11 E-value=5.1 Score=41.22 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=14.1
Q ss_pred CCCeEEEcccccceec
Q 012437 160 GDRLIIFSDFDLTCTI 175 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~ 175 (463)
.+++++++||||||+.
T Consensus 96 ~~~~ll~lDyDGTL~P 111 (354)
T PLN02151 96 GKQIVMFLDYDGTLSP 111 (354)
T ss_pred CCceEEEEecCccCCC
Confidence 4789999999999994
No 222
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=57.85 E-value=1.6e+02 Score=30.67 Aligned_cols=138 Identities=9% Similarity=0.094 Sum_probs=73.0
Q ss_pred CCHHHHHHHhhcCCCChhH-HHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeecccc
Q 012437 273 INLEDIKKAGERLSLQDGC-TTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII 351 (463)
Q Consensus 273 i~~~~i~~~~~~i~lr~G~-~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~ 351 (463)
++.+++.++.+++.+ |++ .+--++|++ .++.||=.|=-+-.+-..|...|+..+.|+=+...-..+....-+.
T Consensus 15 l~~~~~~ry~Rq~~l-~~~g~~~q~~L~~-----~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~ 88 (392)
T PRK07878 15 LTRDEVARYSRHLII-PDVGVDGQKRLKN-----ARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIH 88 (392)
T ss_pred CCHHHHHHhhheech-hhcCHHHHHHHhc-----CCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEecCccccccccc
Confidence 466666666665544 222 344555554 4577765542244555556667876554443332211111111111
Q ss_pred ccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCc---ccHHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceeee
Q 012437 352 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV---GDLLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFIP 420 (463)
Q Consensus 352 ~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~---tDl~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~p 420 (463)
..--.|..|.+...+.+...+. .-++..+-... ++...+..+| +|+.. + -.+-++|.+++++|+-
T Consensus 89 ~~~diG~~Ka~~a~~~l~~~np--~v~i~~~~~~i~~~~~~~~~~~~D--~Vvd~~d~~~~r~~ln~~~~~~~~p~v~ 162 (392)
T PRK07878 89 GQSDVGRSKAQSARDSIVEINP--LVNVRLHEFRLDPSNAVELFSQYD--LILDGTDNFATRYLVNDAAVLAGKPYVW 162 (392)
T ss_pred ChhcCCChHHHHHHHHHHHhCC--CcEEEEEeccCChhHHHHHHhcCC--EEEECCCCHHHHHHHHHHHHHcCCCEEE
Confidence 1222356799888887776664 23444444333 3345566788 45533 2 1466889999998773
No 223
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=57.47 E-value=1.6e+02 Score=30.45 Aligned_cols=112 Identities=14% Similarity=0.118 Sum_probs=57.7
Q ss_pred CcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEc--
Q 012437 306 ANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIG-- 383 (463)
Q Consensus 306 ~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIG-- 383 (463)
.++.|+-.|-.+-.+-..|...|+..+.++=....-..+.....+...--.|..|.+.+.+.+.+.+.. -++..+=
T Consensus 136 ~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~--v~v~~~~~~ 213 (376)
T PRK08762 136 ARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD--VQVEAVQER 213 (376)
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC--CEEEEEecc
Confidence 467777655335666666777787554444322211111111111111123567998888777665532 2332221
Q ss_pred -CCcccHHHhHhcCeeEEEcC-C-h----hHHHHhhhhCceeeec
Q 012437 384 -DSVGDLLCLLEADIGIVIGS-S-S----SLRRVGSQFGVTFIPL 421 (463)
Q Consensus 384 -Ds~tDl~~l~~Adigiv~~~-~-~----~L~~~~~~~gi~~~p~ 421 (463)
+..+....+..+| +|+.. + . .+-++|.+++++++--
T Consensus 214 ~~~~~~~~~~~~~D--~Vv~~~d~~~~r~~ln~~~~~~~ip~i~~ 256 (376)
T PRK08762 214 VTSDNVEALLQDVD--VVVDGADNFPTRYLLNDACVKLGKPLVYG 256 (376)
T ss_pred CChHHHHHHHhCCC--EEEECCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 2222233456677 55533 2 1 4678899999988743
No 224
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=57.06 E-value=5.5 Score=39.37 Aligned_cols=16 Identities=31% Similarity=0.511 Sum_probs=0.0
Q ss_pred CCCCeEEEccccccee
Q 012437 159 AGDRLIIFSDFDLTCT 174 (463)
Q Consensus 159 ~~~~~~ii~DFD~TiT 174 (463)
...+.++++|||||||
T Consensus 15 ~a~~~~~~lDyDGTl~ 30 (266)
T COG1877 15 NARKRLLFLDYDGTLT 30 (266)
T ss_pred cccceEEEEecccccc
No 225
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=56.91 E-value=19 Score=40.82 Aligned_cols=17 Identities=24% Similarity=0.346 Sum_probs=14.6
Q ss_pred CCCeEEEcccccceecc
Q 012437 160 GDRLIIFSDFDLTCTIV 176 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~ 176 (463)
.++.+|++||||||+..
T Consensus 490 ~~~rLi~~D~DGTL~~~ 506 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPF 506 (726)
T ss_pred ccceEEEEecCccccCC
Confidence 35789999999999974
No 226
>PLN03017 trehalose-phosphatase
Probab=56.60 E-value=5.7 Score=41.06 Aligned_cols=15 Identities=33% Similarity=0.767 Sum_probs=13.5
Q ss_pred CCCeEEEccccccee
Q 012437 160 GDRLIIFSDFDLTCT 174 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT 174 (463)
.++++|++||||||+
T Consensus 109 ~k~~llflD~DGTL~ 123 (366)
T PLN03017 109 GKQIVMFLDYDGTLS 123 (366)
T ss_pred CCCeEEEEecCCcCc
Confidence 367899999999999
No 227
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=54.77 E-value=46 Score=29.20 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=39.3
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 329 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl 329 (463)
+..+.+.+.....|..|+++| +.+.+.|-+|..++....|+.+.+
T Consensus 40 g~e~~fY~Di~rIL~dLk~~G---Vtl~~ASRt~ap~iA~q~L~~fkv 84 (144)
T KOG4549|consen 40 GEEMIFYDDIRRILVDLKKLG---VTLIHASRTMAPQIASQGLETFKV 84 (144)
T ss_pred cceeeeccchhHHHHHHHhcC---cEEEEecCCCCHHHHHHHHHHhcc
Confidence 446788899999999999999 999999999999999999887654
No 228
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=53.99 E-value=12 Score=35.91 Aligned_cols=48 Identities=27% Similarity=0.389 Sum_probs=30.2
Q ss_pred CcchHHHHHHHHHHhCCC--CCceEEEEcCCcccHHHhHhc------CeeEEEcCC
Q 012437 357 PIDKVQAFNNTLEKYGTD--RKNLSVYIGDSVGDLLCLLEA------DIGIVIGSS 404 (463)
Q Consensus 357 g~~K~~~l~~l~~~~~~~--~~~~vIyIGDs~tDl~~l~~A------digiv~~~~ 404 (463)
+..|..+++.+++..+.. ....++|+||..||-.|+... +++|.++..
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~ 218 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSV 218 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES--
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEee
Confidence 445999999999765421 124799999999999999874 445666553
No 229
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=53.16 E-value=34 Score=40.25 Aligned_cols=76 Identities=18% Similarity=0.275 Sum_probs=48.2
Q ss_pred HHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceE-EEEcCCcc-cHHHhHhc
Q 012437 318 DLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLS-VYIGDSVG-DLLCLLEA 395 (463)
Q Consensus 318 ~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~v-IyIGDs~t-Dl~~l~~A 395 (463)
.-|+..|+..|+...-|+|.. |.+..-++....|.++|+-+..+++.+. .++ |++|||-| |++.|+.-
T Consensus 924 ~elr~~Lr~~gLr~~~iys~~---------~~~LDVlP~~ASKgqAlRyL~~rwgi~l-~~v~VfaGdSGntD~e~Ll~G 993 (1050)
T TIGR02468 924 KELRKLLRIQGLRCHAVYCRN---------GTRLNVIPLLASRSQALRYLFVRWGIEL-ANMAVFVGESGDTDYEGLLGG 993 (1050)
T ss_pred HHHHHHHHhCCCceEEEeecC---------CcEeeeeeCCCCHHHHHHHHHHHcCCCh-HHeEEEeccCCCCCHHHHhCC
Confidence 457777887776432233321 1222223344569999999998888753 455 67999999 98877543
Q ss_pred C-eeEEEcC
Q 012437 396 D-IGIVIGS 403 (463)
Q Consensus 396 d-igiv~~~ 403 (463)
- -+||+..
T Consensus 994 ~~~tvi~~g 1002 (1050)
T TIGR02468 994 LHKTVILKG 1002 (1050)
T ss_pred ceeEEEEec
Confidence 2 2777744
No 230
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=52.39 E-value=43 Score=29.21 Aligned_cols=50 Identities=4% Similarity=-0.131 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccCH--------------HHHHHHHHhcCCCcceEEeec
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCG--------------DLIRASFSSAGLNALNVHANE 338 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~--------------~~I~~~l~~~gl~~~~I~aN~ 338 (463)
.+.+++.+.++.++++| +.++++|+--.. ..+..+|.+++++-.+|+.-.
T Consensus 24 ~~~~~~ie~L~~l~~~G---~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 24 APILAVIEKLRHYKALG---FEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred ccCHHHHHHHHHHHHCC---CEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCC
Confidence 46677888899998888 999999985211 267788888887655555433
No 231
>COG1458 Predicted DNA-binding protein containing PIN domain [General function prediction only]
Probab=51.66 E-value=12 Score=35.02 Aligned_cols=42 Identities=31% Similarity=0.436 Sum_probs=35.1
Q ss_pred EcCCcccHHHhHhcCe--eEEEcCChhHHHHhhhhCceeeecCc
Q 012437 382 IGDSVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 382 IGDs~tDl~~l~~Adi--giv~~~~~~L~~~~~~~gi~~~p~~~ 423 (463)
+=||.-|+..|+.|-. |.|+.++.-+++.+++.|++|++-.+
T Consensus 158 iLDSapDlDvLLLAkELdaavVssD~Gir~WAe~LGlrfv~a~~ 201 (221)
T COG1458 158 ILDSAPDLDVLLLAKELDAAVVSSDEGIRTWAEKLGLRFVDAFK 201 (221)
T ss_pred cccccchhHHHHHHHHhCceEEecchhHHHHHHHhCCeeeCHhh
Confidence 5599999999988744 66777777899999999999997653
No 232
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=51.48 E-value=1.6e+02 Score=25.33 Aligned_cols=112 Identities=15% Similarity=0.254 Sum_probs=60.0
Q ss_pred CcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCC
Q 012437 306 ANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS 385 (463)
Q Consensus 306 ~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs 385 (463)
.++.|+-.|=-+-.+-..|...|+..+.|+=+...-..+.....+..+...|..|.+++++.+.+.+. ..++..+...
T Consensus 3 ~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np--~~~v~~~~~~ 80 (135)
T PF00899_consen 3 KRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP--DVEVEAIPEK 80 (135)
T ss_dssp -EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST--TSEEEEEESH
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC--ceeeeeeecc
Confidence 45777766422444555555567755444433322222222221222223377899999999887764 3566666665
Q ss_pred ccc--HH-HhHhcCeeEEEcC--C----hhHHHHhhhhCceeeec
Q 012437 386 VGD--LL-CLLEADIGIVIGS--S----SSLRRVGSQFGVTFIPL 421 (463)
Q Consensus 386 ~tD--l~-~l~~Adigiv~~~--~----~~L~~~~~~~gi~~~p~ 421 (463)
.++ +. .+..+| +++.. + ..|.++|++++++++--
T Consensus 81 ~~~~~~~~~~~~~d--~vi~~~d~~~~~~~l~~~~~~~~~p~i~~ 123 (135)
T PF00899_consen 81 IDEENIEELLKDYD--IVIDCVDSLAARLLLNEICREYGIPFIDA 123 (135)
T ss_dssp CSHHHHHHHHHTSS--EEEEESSSHHHHHHHHHHHHHTT-EEEEE
T ss_pred cccccccccccCCC--EEEEecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 522 22 233567 44433 2 26888999999977643
No 233
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=51.22 E-value=35 Score=31.89 Aligned_cols=50 Identities=16% Similarity=0.030 Sum_probs=35.7
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceE
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFS 340 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~ 340 (463)
+.|...+.|+.++++| ++++|.|+.. ...++.+++..+++..-|.+|--.
T Consensus 19 i~~~~~~~i~~l~~~g---~~~~~~TGR~-~~~~~~~~~~l~~~~~~i~~NGa~ 68 (215)
T TIGR01487 19 ISERAIEAIRKAEKKG---IPVSLVTGNT-VPFARALAVLIGTSGPVVAENGGV 68 (215)
T ss_pred cCHHHHHHHHHHHHCC---CEEEEEcCCc-chhHHHHHHHhCCCCcEEEccCcE
Confidence 4455667788899999 9999999975 556777877777653345566533
No 234
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=50.86 E-value=75 Score=31.48 Aligned_cols=89 Identities=20% Similarity=0.120 Sum_probs=51.9
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEcccc--CHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchH
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCW--CGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~--s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
....-||+.++|+.|+++| .++++||-|- +.+.....|+.++..+. -- +.+.| ++
T Consensus 22 G~~~ipga~e~l~~L~~~g---~~~iflTNn~~~s~~~~~~~L~~~~~~~~--~~------~~i~T--------S~---- 78 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAG---KPVIFLTNNSTRSREVVAARLSSLGGVDV--TP------DDIVT--------SG---- 78 (269)
T ss_pred CCccCchHHHHHHHHHHcC---CeEEEEeCCCCCCHHHHHHHHHhhcCCCC--CH------HHeec--------HH----
Confidence 3578899999999999999 9999999753 34434445554332110 00 11111 11
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCee
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 398 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adig 398 (463)
.+..+++.+.. ...+++.|| ..++...+..+|+-
T Consensus 79 ~at~~~l~~~~--~~~kv~viG-~~~l~~~l~~~G~~ 112 (269)
T COG0647 79 DATADYLAKQK--PGKKVYVIG-EEGLKEELEGAGFE 112 (269)
T ss_pred HHHHHHHHhhC--CCCEEEEEC-CcchHHHHHhCCcE
Confidence 22233443322 125677788 56677778777753
No 235
>cd00232 HemeO Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is essential for recycling of iron from heme. Heme is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes bacterial HO, as well as the mammalian isoforms HO-1, and HO-2. Heme oxygenases play key roles in heme homeostasis, oxidative stress response, photosynthetic pigment formation in cyanobacteria, cellular signaling in mammals, and iron acquisition from host heme by bacterial pathogens.
Probab=49.84 E-value=2.1e+02 Score=26.37 Aligned_cols=100 Identities=17% Similarity=-0.006 Sum_probs=53.5
Q ss_pred cCCCCccc-ccCCChhHHHHHHHHHHHhcCCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHH----HHHHHHHHhhc
Q 012437 3 EWGTDLAK-MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY----AFLGKEFHALL 77 (463)
Q Consensus 3 ~~gi~~~~-~~~~~~~~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y----~~~~~~~~~~~ 77 (463)
.+|.+... ...+.+++ .|..++...+.++. +.++++++.-+-.= ..|++++.+..
T Consensus 83 ~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------------------~~~lg~~YV~egs~l~GG~~i~~~l~~~~ 142 (203)
T cd00232 83 YLGGSDWRVREPPLPAA-AYAARLREIAEENP-------------------ALLLGHAYVRYGADLSGGQVLAKIAQRAL 142 (203)
T ss_pred HHhCCCccccCCCChHH-HHHHHHHHHHhcCH-------------------HHHHHHHHHHHHHHhcccHHHHHHHHHHh
Confidence 34555433 33455666 88888877765433 56677776655321 12333444332
Q ss_pred cCCCCcccccccccccCChHHHHHHHHHHHHHHHhhccCCHHHHHHHHHH
Q 012437 78 NANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKL 127 (463)
Q Consensus 78 ~~~~~~~~y~~Wi~~y~s~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~ 127 (463)
.. + ..--.+...|+.++-.+.-..+.+.||.+ ..++++.+++.+-
T Consensus 143 ~~--~-~~~~~f~~~~g~~~~~~~w~~f~~~l~~~--~~~~~~~~~~i~~ 187 (203)
T cd00232 143 LL--E-GKGLAFYAFHGIADRGLFKREFREALDAL--PLDEEERQRVVAE 187 (203)
T ss_pred CC--C-CccCccccCCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHH
Confidence 21 1 12234455665344456666677778876 4567766665443
No 236
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=49.32 E-value=7.1 Score=36.00 Aligned_cols=15 Identities=27% Similarity=-0.130 Sum_probs=12.9
Q ss_pred EEEcccccceecccc
Q 012437 164 IIFSDFDLTCTIVDS 178 (463)
Q Consensus 164 ~ii~DFD~TiT~~DT 178 (463)
+|+||.|||||....
T Consensus 3 ~i~fDktGTLt~~~~ 17 (215)
T PF00702_consen 3 AICFDKTGTLTQGKM 17 (215)
T ss_dssp EEEEECCTTTBESHH
T ss_pred EEEEecCCCcccCeE
Confidence 699999999998643
No 237
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=49.17 E-value=6.3 Score=37.65 Aligned_cols=14 Identities=36% Similarity=0.351 Sum_probs=11.8
Q ss_pred EEEcccccceeccc
Q 012437 164 IIFSDFDLTCTIVD 177 (463)
Q Consensus 164 ~ii~DFD~TiT~~D 177 (463)
+|++|+|||+...|
T Consensus 1 li~~DlDgTLl~~~ 14 (236)
T TIGR02471 1 LIITDLDNTLLGDD 14 (236)
T ss_pred CeEEeccccccCCH
Confidence 58999999999754
No 238
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=49.07 E-value=44 Score=32.65 Aligned_cols=48 Identities=8% Similarity=-0.038 Sum_probs=35.5
Q ss_pred ChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeece
Q 012437 288 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF 339 (463)
Q Consensus 288 r~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l 339 (463)
.++..+.|+.++++| ++++|+|+.. ...+...+++.|+....|..|--
T Consensus 23 ~~~~~~ai~~l~~~G---i~~~iaTgR~-~~~~~~~~~~l~l~~~~i~~nGa 70 (273)
T PRK00192 23 YEPAKPALKALKEKG---IPVIPCTSKT-AAEVEVLRKELGLEDPFIVENGA 70 (273)
T ss_pred cHHHHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHcCCCCCEEEEcCc
Confidence 345667888999999 9999999875 66788888888875434555543
No 239
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=47.81 E-value=9 Score=33.46 Aligned_cols=13 Identities=31% Similarity=0.365 Sum_probs=11.3
Q ss_pred EEEcccccceecc
Q 012437 164 IIFSDFDLTCTIV 176 (463)
Q Consensus 164 ~ii~DFD~TiT~~ 176 (463)
+|++|.||||+..
T Consensus 3 ~i~~DiDGTL~~~ 15 (126)
T TIGR01689 3 RLVMDLDNTITLT 15 (126)
T ss_pred EEEEeCCCCcccC
Confidence 7899999999864
No 240
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=46.97 E-value=13 Score=39.64 Aligned_cols=38 Identities=8% Similarity=0.103 Sum_probs=27.6
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS 326 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~ 326 (463)
+.-.|....+|+.++++| ..+.++|.+- -+|...++..
T Consensus 182 i~k~~~l~~~L~~lr~~G---KklFLiTNS~-~~yt~~~M~y 219 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAG---KKLFLITNSP-FDYTNAVMSY 219 (448)
T ss_dssp EE--CHHHHHHHHHHCCT----EEEEE-SS--HHHHHHHHHH
T ss_pred ccCCchHHHHHHHHHhcC---ceEEEecCCC-Cchhhhhhhh
Confidence 455778999999999998 8899999764 6788888764
No 241
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=46.64 E-value=48 Score=32.49 Aligned_cols=52 Identities=15% Similarity=0.204 Sum_probs=38.6
Q ss_pred cCeeEEEcCChhHHHHhhhhCceeeecCchhhHhHHhhhcCCCCCcccccCeEEEeCCHHHHHHhH
Q 012437 395 ADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFI 460 (463)
Q Consensus 395 Adigiv~~~~~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~W~~i~~~~ 460 (463)
|-.+++..-+.+..+.|++.||+|+.|+ .+.|...+...+.|++|.|....+
T Consensus 73 ATHPyAa~iS~Na~~aake~gipy~r~e--------------RP~~~~~gd~~~~V~d~~ea~~~~ 124 (257)
T COG2099 73 ATHPYAARISQNAARAAKETGIPYLRLE--------------RPPWAPNGDNWIEVADIEEAAEAA 124 (257)
T ss_pred CCChHHHHHHHHHHHHHHHhCCcEEEEE--------------CCccccCCCceEEecCHHHHHHHH
Confidence 3334343334689999999999999996 456776655899999999987654
No 242
>PLN02382 probable sucrose-phosphatase
Probab=46.45 E-value=12 Score=39.43 Aligned_cols=16 Identities=44% Similarity=0.461 Sum_probs=14.6
Q ss_pred CCeEEEcccccceecc
Q 012437 161 DRLIIFSDFDLTCTIV 176 (463)
Q Consensus 161 ~~~~ii~DFD~TiT~~ 176 (463)
.+++|++|+|||+...
T Consensus 8 ~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 8 PRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCEEEEEcCCCcCcCC
Confidence 6899999999999975
No 243
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=46.37 E-value=47 Score=31.65 Aligned_cols=47 Identities=6% Similarity=-0.123 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceE
Q 012437 290 GCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFS 340 (463)
Q Consensus 290 G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~ 340 (463)
+..+.|+.++++| +++++.|+.- ..-+...++++|+...-|.+|--.
T Consensus 19 ~~~~ai~~l~~~G---~~~vi~TgR~-~~~~~~~~~~lg~~~~~I~~NGa~ 65 (225)
T TIGR02461 19 PAREALEELKDLG---FPIVFVSSKT-RAEQEYYREELGVEPPFIVENGGA 65 (225)
T ss_pred HHHHHHHHHHHCC---CEEEEEeCCC-HHHHHHHHHHcCCCCcEEEcCCcE
Confidence 3567788899999 9999999873 556778888888644345555433
No 244
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=45.78 E-value=52 Score=31.59 Aligned_cols=49 Identities=12% Similarity=0.074 Sum_probs=35.3
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeece
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF 339 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l 339 (463)
+.+...+.|+.++++| +.++|.|+.- ...+...+++.++...-|.+|-.
T Consensus 17 i~~~~~~~i~~l~~~G---~~~~iaTGR~-~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 17 ISPSTKEALAKLREKG---IKVVLATGRP-YKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred cCHHHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCCCCEEEcCCc
Confidence 4445667788999999 9999999874 66778888887765334445543
No 245
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=44.48 E-value=3.1e+02 Score=28.36 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=73.8
Q ss_pred CCCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccc-
Q 012437 272 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEI- 350 (463)
Q Consensus 272 Gi~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~- 350 (463)
-++.+++.++.+++.+..=-.+--+++++ .++.|+=.|=-+-.+-..|...|+..+.|+=....-..+ +.-.+
T Consensus 13 ~~~~~e~~ry~Rqi~l~~~g~~~q~~l~~-----~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sN-L~RQ~l 86 (370)
T PRK05600 13 QLPTSELRRTARQLALPGFGIEQQERLHN-----ARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSN-IHRQIL 86 (370)
T ss_pred CCCHHHHHHhhcccchhhhCHHHHHHhcC-----CcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCEEcccc-cccccc
Confidence 45667777777776663212444455553 457777654335555556666776554433222211111 11111
Q ss_pred cccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCcc---cHHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceee
Q 012437 351 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVG---DLLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFI 419 (463)
Q Consensus 351 ~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~t---Dl~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~ 419 (463)
...--.|..|...+.+.+.+.+.. -++..+-...+ ....+..+| +|+.. + -.+-++|.+++++++
T Consensus 87 ~~~~diG~~Ka~~~~~~l~~~np~--v~i~~~~~~i~~~~~~~~~~~~D--lVid~~Dn~~~r~~in~~~~~~~iP~v 160 (370)
T PRK05600 87 FGASDVGRPKVEVAAERLKEIQPD--IRVNALRERLTAENAVELLNGVD--LVLDGSDSFATKFLVADAAEITGTPLV 160 (370)
T ss_pred CChhHCCCHHHHHHHHHHHHHCCC--CeeEEeeeecCHHHHHHHHhCCC--EEEECCCCHHHHHHHHHHHHHcCCCEE
Confidence 111223567998888877776642 33444433332 234566688 55533 2 145688999999887
No 246
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=43.74 E-value=64 Score=30.14 Aligned_cols=36 Identities=8% Similarity=0.077 Sum_probs=30.1
Q ss_pred HHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 012437 291 CTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN 330 (463)
Q Consensus 291 ~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~ 330 (463)
..+.|+.++++| ++++|+|+.- ...++.+++..+++
T Consensus 21 ~~~~l~~l~~~g---i~~~i~TgR~-~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAG---IPVILCTSKT-AAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCC---CeEEEEcCCC-HHHHHHHHHHcCCC
Confidence 456788889988 9999999984 77889999888865
No 247
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=43.16 E-value=14 Score=33.95 Aligned_cols=17 Identities=18% Similarity=0.022 Sum_probs=14.4
Q ss_pred CCCeEEEcccccceecc
Q 012437 160 GDRLIIFSDFDLTCTIV 176 (463)
Q Consensus 160 ~~~~~ii~DFD~TiT~~ 176 (463)
+.-.++|||+||++|..
T Consensus 5 ~~i~~~v~d~dGv~tdg 21 (169)
T TIGR02726 5 KNIKLVILDVDGVMTDG 21 (169)
T ss_pred ccCeEEEEeCceeeECC
Confidence 45569999999999975
No 248
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=43.10 E-value=1.9e+02 Score=24.98 Aligned_cols=62 Identities=16% Similarity=0.122 Sum_probs=38.2
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcC---CcccHHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceeeec
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD---SVGDLLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFIPL 421 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGD---s~tDl~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~p~ 421 (463)
.|..|.+.+.+.+...+. .-++-.+-. +.++...+...| +++.. + ..+.++|++++++++--
T Consensus 50 vG~~Ka~~~~~~l~~~~p--~v~i~~~~~~~~~~~~~~~~~~~d--iVi~~~d~~~~~~~l~~~~~~~~i~~i~~ 120 (143)
T cd01483 50 IGKPKAEVAARRLNELNP--GVNVTAVPEGISEDNLDDFLDGVD--LVIDAIDNIAVRRALNRACKELGIPVIDA 120 (143)
T ss_pred CCChHHHHHHHHHHHHCC--CcEEEEEeeecChhhHHHHhcCCC--EEEECCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 356799988888877663 223333322 223345666777 55533 2 25788999999887754
No 249
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=43.01 E-value=11 Score=32.60 Aligned_cols=14 Identities=29% Similarity=0.219 Sum_probs=12.2
Q ss_pred EEEcccccceeccc
Q 012437 164 IIFSDFDLTCTIVD 177 (463)
Q Consensus 164 ~ii~DFD~TiT~~D 177 (463)
++++|+|+||+..+
T Consensus 2 li~~DlD~Tl~~~~ 15 (128)
T TIGR01681 2 VIVFDLDNTLWTGE 15 (128)
T ss_pred EEEEeCCCCCCCCC
Confidence 78999999999764
No 250
>PTZ00174 phosphomannomutase; Provisional
Probab=41.67 E-value=13 Score=35.86 Aligned_cols=16 Identities=31% Similarity=0.247 Sum_probs=13.7
Q ss_pred CeEEEcccccceeccc
Q 012437 162 RLIIFSDFDLTCTIVD 177 (463)
Q Consensus 162 ~~~ii~DFD~TiT~~D 177 (463)
..+|++|.||||...|
T Consensus 5 ~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 5 KTILLFDVDGTLTKPR 20 (247)
T ss_pred CeEEEEECcCCCcCCC
Confidence 4689999999999765
No 251
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=41.60 E-value=25 Score=40.39 Aligned_cols=42 Identities=14% Similarity=-0.006 Sum_probs=28.6
Q ss_pred CCCcchHHHHHHHHHHhC-----CCCCceEEEEcCCcc-cHHHhHhcC
Q 012437 355 ESPIDKVQAFNNTLEKYG-----TDRKNLSVYIGDSVG-DLLCLLEAD 396 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~-----~~~~~~vIyIGDs~t-Dl~~l~~Ad 396 (463)
..+.+|..++++++.+.. ....+-++.+||..+ |=.|+..-+
T Consensus 674 p~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 674 AIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred cCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 346789999999987541 012356789999864 877776543
No 252
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=41.27 E-value=13 Score=33.68 Aligned_cols=14 Identities=36% Similarity=0.316 Sum_probs=10.4
Q ss_pred EEEcccccceeccc
Q 012437 164 IIFSDFDLTCTIVD 177 (463)
Q Consensus 164 ~ii~DFD~TiT~~D 177 (463)
+++||+||||+...
T Consensus 2 ia~fD~DgTLi~~~ 15 (159)
T PF08645_consen 2 IAFFDLDGTLIKTK 15 (159)
T ss_dssp EEEE-SCTTTEE-S
T ss_pred EEEEeCCCCccCCC
Confidence 68999999998754
No 253
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=40.72 E-value=97 Score=31.56 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=59.4
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccc-cCHH--HHHHHHHhcCCCcceEEeeceEEccceeeccccccCC-CCcc
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC-WCGD--LIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVE-SPID 359 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g-~s~~--~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~-~g~~ 359 (463)
.-...||+..+++.+.+.+ ..+++-||.+ | .. .+..++...+++.-.++--+ + ++. ++.... .+..
T Consensus 194 tr~~ipGV~~~yr~l~~~~--~apvfYvSnSPw-~~f~~L~efi~~~~~P~GPl~L~~--~-g~~----~~~i~~sga~r 263 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLG--DAPVFYVSNSPW-QLFPTLQEFITNRNFPYGPLLLRR--W-GGV----LDNIIESGAAR 263 (373)
T ss_pred ccCCCCCHHHHHHHHHhcC--CCCeEEecCChh-HhHHHHHHHHhcCCCCCCchhHhh--c-CCc----ccccccchhhh
Confidence 3578899999999999875 2688888875 3 22 25555555555432211100 1 112 222222 3446
Q ss_pred hHHHHHHHHHHhCCCCCceEEEEcCC-cccHHHhHh
Q 012437 360 KVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLE 394 (463)
Q Consensus 360 K~~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~~ 394 (463)
|...++.++.++. +.+.|.|||| .-|.+.-..
T Consensus 264 K~~~l~nil~~~p---~~kfvLVGDsGE~DpeIYae 296 (373)
T COG4850 264 KGQSLRNILRRYP---DRKFVLVGDSGEHDPEIYAE 296 (373)
T ss_pred cccHHHHHHHhCC---CceEEEecCCCCcCHHHHHH
Confidence 7788887887764 4689999996 578765443
No 254
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=40.05 E-value=3.1e+02 Score=27.14 Aligned_cols=117 Identities=10% Similarity=0.147 Sum_probs=63.5
Q ss_pred HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeecccc-ccCCCCcchHHHHHHHHHHh
Q 012437 293 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII-EKVESPIDKVQAFNNTLEKY 371 (463)
Q Consensus 293 efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~-~~~~~g~~K~~~l~~l~~~~ 371 (463)
+.++.|++ ..+.|+-.|-.+-.+-..|...|+..+.|+=....-..+. .-.+. ..-..|..|.+++.+.+...
T Consensus 23 e~~~kL~~-----s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNl-nRQ~~~~~~~vG~~Kve~~~~rl~~I 96 (268)
T PRK15116 23 KALQLFAD-----AHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNT-NRQIHALRDNVGLAKAEVMAERIRQI 96 (268)
T ss_pred HHHHHhcC-----CCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEeccccc-ccccccChhhcChHHHHHHHHHHHhH
Confidence 33455553 4577776654466666777767865544443222111111 11111 01123567999988888776
Q ss_pred CCCCCceEEEEcCCcc--cHHHhH--hcCeeEEEcC-C-----hhHHHHhhhhCceee
Q 012437 372 GTDRKNLSVYIGDSVG--DLLCLL--EADIGIVIGS-S-----SSLRRVGSQFGVTFI 419 (463)
Q Consensus 372 ~~~~~~~vIyIGDs~t--Dl~~l~--~Adigiv~~~-~-----~~L~~~~~~~gi~~~ 419 (463)
+. ..++..+=+..+ ....+. ..| +|+.+ + ..|.++|.+++++++
T Consensus 97 NP--~~~V~~i~~~i~~e~~~~ll~~~~D--~VIdaiD~~~~k~~L~~~c~~~~ip~I 150 (268)
T PRK15116 97 NP--ECRVTVVDDFITPDNVAEYMSAGFS--YVIDAIDSVRPKAALIAYCRRNKIPLV 150 (268)
T ss_pred CC--CcEEEEEecccChhhHHHHhcCCCC--EEEEcCCCHHHHHHHHHHHHHcCCCEE
Confidence 64 345555533222 233333 356 55534 2 258899999999998
No 255
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=39.72 E-value=52 Score=32.06 Aligned_cols=41 Identities=7% Similarity=0.097 Sum_probs=31.4
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCCC
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGLN 330 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~gl~ 330 (463)
+-||..++++.++++| +++.++|.+-+ ..-+...++.+|++
T Consensus 22 ~~~~a~~al~~l~~~G---~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGAS---VKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCC---CeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5779999999999999 99999997532 23456666777764
No 256
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=38.85 E-value=1.1e+02 Score=29.94 Aligned_cols=46 Identities=22% Similarity=0.315 Sum_probs=32.0
Q ss_pred cchHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcCChhHHHHhhhhCceeeecCc
Q 012437 358 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 358 ~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~~ 423 (463)
..|.+.+++++.+.+.. ...-++||||..--. .+++.+|||+++..
T Consensus 213 vGK~~cFe~I~~Rfg~p-~~~f~~IGDG~eEe~-------------------aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 213 VGKLQCFKWIKERFGHP-KVRFCAIGDGWEECT-------------------AAQAMNWPFVKIDL 258 (274)
T ss_pred cchHHHHHHHHHHhCCC-CceEEEeCCChhHHH-------------------HHHhcCCCeEEeec
Confidence 46999999999988742 356778999875443 34566666766653
No 257
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=38.81 E-value=79 Score=29.60 Aligned_cols=47 Identities=15% Similarity=-0.041 Sum_probs=32.5
Q ss_pred ChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeec
Q 012437 288 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANE 338 (463)
Q Consensus 288 r~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~ 338 (463)
.|...+.|+.++++| ++++|.|+-- ...+..++...+++..-|.+|-
T Consensus 22 ~~~~~~al~~l~~~G---~~~~iaTGR~-~~~~~~~~~~l~~~~~~i~~nG 68 (230)
T PRK01158 22 SLKAVEAIRKAEKLG---IPVILATGNV-LCFARAAAKLIGTSGPVIAENG 68 (230)
T ss_pred CHHHHHHHHHHHHCC---CEEEEEcCCc-hHHHHHHHHHhCCCCcEEEecC
Confidence 334456678888889 9999999863 5567777777776543344553
No 258
>PF08745 UPF0278: UPF0278 family; InterPro: IPR022785 This entry contains proteins of the UPF0278 family and proteins containing PIN domains. Members of the UPF0278 family are uncharacterised and about 200 amino acids in length.; PDB: 2LCQ_A.
Probab=38.79 E-value=17 Score=34.24 Aligned_cols=41 Identities=24% Similarity=0.310 Sum_probs=24.4
Q ss_pred EcCCcccHHHhHhcCe--eEEEcCChhHHHHhhhhCceeeecC
Q 012437 382 IGDSVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIPLY 422 (463)
Q Consensus 382 IGDs~tDl~~l~~Adi--giv~~~~~~L~~~~~~~gi~~~p~~ 422 (463)
+=||..|+..++.|-- |+++.++.-+.++|++.|++|++-.
T Consensus 151 ~ldS~~D~dvl~LA~El~a~lvt~D~gi~~~A~~lGi~~i~~~ 193 (205)
T PF08745_consen 151 ILDSREDIDVLLLALELDAVLVTDDYGIQNWAEKLGIRFIDAR 193 (205)
T ss_dssp ----HHHHHHHHHHHHHT--EE---HHHHHHHHHTT--EE---
T ss_pred cCCChHhHHHHHHHHHcCCEEEeCCHhHHHHHHHCCCEEEecc
Confidence 4589999999988744 7888888899999999999999654
No 259
>PRK10444 UMP phosphatase; Provisional
Probab=38.68 E-value=59 Score=31.60 Aligned_cols=41 Identities=17% Similarity=0.370 Sum_probs=30.7
Q ss_pred CCChhHHHHHHHHHHcCCCCCcEEEEccccC--HHHHHHHHHhcCC
Q 012437 286 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC--GDLIRASFSSAGL 329 (463)
Q Consensus 286 ~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s--~~~I~~~l~~~gl 329 (463)
.+.||..++++.|+++| .+++++|.+-+ ..-+...|+..|+
T Consensus 17 ~~~p~a~~~l~~L~~~g---~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 17 VAVPGAAEFLHRILDKG---LPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred eeCccHHHHHHHHHHCC---CeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 45789999999999999 99999998743 2224444555676
No 260
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=38.51 E-value=57 Score=31.55 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=31.5
Q ss_pred ChhHHHHHHHHHHcCCCCCcEEEEcc--ccCHHHHHHHHHhcCCC
Q 012437 288 QDGCTTFFQKVVKNENLNANVHVLSY--CWCGDLIRASFSSAGLN 330 (463)
Q Consensus 288 r~G~~efl~~l~~~g~~~~~~~IvS~--g~s~~~I~~~l~~~gl~ 330 (463)
-||..++++.++++| ++++++|. +.+..-+...++..|++
T Consensus 19 i~~a~~~l~~l~~~g---~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 19 IPEAETFVHELQKRD---IPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CcCHHHHHHHHHHCC---CeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 357889999999999 99999996 34466677778877764
No 261
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=38.48 E-value=78 Score=30.72 Aligned_cols=48 Identities=6% Similarity=0.033 Sum_probs=33.4
Q ss_pred ChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeece
Q 012437 288 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF 339 (463)
Q Consensus 288 r~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l 339 (463)
.+...+.|++++++| +.++|.|+- +-..++.++++.+++..-|.+|-.
T Consensus 21 ~~~~~~ai~~l~~~G---~~~~iaTGR-~~~~~~~~~~~l~~~~~~I~~NGa 68 (272)
T PRK15126 21 GEKTLSTLARLRERD---ITLTFATGR-HVLEMQHILGALSLDAYLITGNGT 68 (272)
T ss_pred CHHHHHHHHHHHHCC---CEEEEECCC-CHHHHHHHHHHcCCCCcEEecCCc
Confidence 333455678889999 999999986 356688888887765433445543
No 262
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=38.32 E-value=16 Score=31.27 Aligned_cols=12 Identities=33% Similarity=0.094 Sum_probs=10.9
Q ss_pred EEEcccccceec
Q 012437 164 IIFSDFDLTCTI 175 (463)
Q Consensus 164 ~ii~DFD~TiT~ 175 (463)
++++|+||||+.
T Consensus 2 ~~~~D~dgtL~~ 13 (132)
T TIGR01662 2 GVVLDLDGTLTD 13 (132)
T ss_pred EEEEeCCCceec
Confidence 689999999994
No 263
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=38.28 E-value=16 Score=32.22 Aligned_cols=14 Identities=21% Similarity=0.062 Sum_probs=12.1
Q ss_pred EEEcccccceeccc
Q 012437 164 IIFSDFDLTCTIVD 177 (463)
Q Consensus 164 ~ii~DFD~TiT~~D 177 (463)
.++||+||||+..-
T Consensus 2 ~~~~d~dgtl~~~~ 15 (147)
T TIGR01656 2 ALFLDRDGVINEDT 15 (147)
T ss_pred eEEEeCCCceeccC
Confidence 68999999999763
No 264
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=38.27 E-value=81 Score=30.37 Aligned_cols=45 Identities=9% Similarity=-0.039 Sum_probs=34.0
Q ss_pred HHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeece
Q 012437 291 CTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF 339 (463)
Q Consensus 291 ~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l 339 (463)
..+.++.++++| ++++|+|+. +...+...+++.|++..-|.+|-.
T Consensus 21 ~~~~i~~l~~~g---~~~~~~TgR-~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 21 AKEVLERLQELG---IPVIPCTSK-TAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred HHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCCCCcEEEcCCe
Confidence 467888899998 999999986 466788888888875434555554
No 265
>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.
Probab=38.16 E-value=3.1e+02 Score=25.81 Aligned_cols=47 Identities=19% Similarity=0.252 Sum_probs=33.8
Q ss_pred CceEEEEcCCcccH------HHhHhcCeeEEEcCC------hhHHHHhhhhCceeeecC
Q 012437 376 KNLSVYIGDSVGDL------LCLLEADIGIVIGSS------SSLRRVGSQFGVTFIPLY 422 (463)
Q Consensus 376 ~~~vIyIGDs~tDl------~~l~~Adigiv~~~~------~~L~~~~~~~gi~~~p~~ 422 (463)
+..++++|++..+- ..+..||+=|++|.+ ..|.+.+.+.|.+.+-+.
T Consensus 131 rP~VV~FgE~lp~~~~~~a~~~~~~aDlllviGTSl~V~pa~~l~~~~~~~g~~vi~iN 189 (206)
T cd01410 131 KDTIVDFGERLPPENWMGAAAAACRADLFLCLGTSLQVTPAANLPLKAARAGGRLVIVN 189 (206)
T ss_pred CCcEEECCCCCCHHHHHHHHHHHhcCCEEEEECcCceehhHHHHHHHHHhcCCeEEEEC
Confidence 46799999998763 333468988888876 357777788887776553
No 266
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=37.69 E-value=75 Score=29.53 Aligned_cols=51 Identities=6% Similarity=0.055 Sum_probs=37.5
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEE
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF 341 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~ 341 (463)
+.|...+.|+.++++| +.++|.|+-. ...+..++...++..--|.+|-...
T Consensus 16 i~~~~~~al~~l~~~g---~~~~i~TGR~-~~~~~~~~~~~~~~~~~I~~nGa~i 66 (254)
T PF08282_consen 16 ISPETIEALKELQEKG---IKLVIATGRS-YSSIKRLLKELGIDDYFICSNGALI 66 (254)
T ss_dssp SCHHHHHHHHHHHHTT---CEEEEECSST-HHHHHHHHHHTTHCSEEEEGGGTEE
T ss_pred eCHHHHHHHHhhcccc---eEEEEEccCc-ccccccccccccchhhhccccccee
Confidence 4556667788899999 9999999874 6778888888776533455554444
No 267
>PRK07411 hypothetical protein; Validated
Probab=37.22 E-value=5e+02 Score=27.03 Aligned_cols=137 Identities=10% Similarity=0.074 Sum_probs=75.1
Q ss_pred CCHHHHHHHhhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeecccc-
Q 012437 273 INLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII- 351 (463)
Q Consensus 273 i~~~~i~~~~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~- 351 (463)
++..++.++.+++.+..=-.+.-++|++ ..+.||=.|=-+-.+-..|...|+..+.|+=+...-..+ +...+.
T Consensus 11 l~~~~~~ry~Rq~~l~~~g~~~q~~L~~-----~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sN-L~RQ~l~ 84 (390)
T PRK07411 11 LSKDEYERYSRHLILPEVGLEGQKRLKA-----ASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSN-LQRQVIH 84 (390)
T ss_pred CCHHHHHHhhceechhhcCHHHHHHHhc-----CcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEecccc-cCcCccc
Confidence 4666667776666554322344455554 457777654225555566666787655443322211111 111111
Q ss_pred ccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCCc---ccHHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceee
Q 012437 352 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV---GDLLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFI 419 (463)
Q Consensus 352 ~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs~---tDl~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~ 419 (463)
..--.|..|.....+-+...+. .-++..+-... ++...+...| +|+.. + -.|-++|.+.+++++
T Consensus 85 ~~~dvG~~Ka~~a~~~l~~~np--~v~v~~~~~~~~~~~~~~~~~~~D--~Vvd~~d~~~~r~~ln~~~~~~~~p~v 157 (390)
T PRK07411 85 GTSWVGKPKIESAKNRILEINP--YCQVDLYETRLSSENALDILAPYD--VVVDGTDNFPTRYLVNDACVLLNKPNV 157 (390)
T ss_pred ChHHCCCcHHHHHHHHHHHHCC--CCeEEEEecccCHHhHHHHHhCCC--EEEECCCCHHHHHHHHHHHHHcCCCEE
Confidence 1122356799888888877664 34555554433 3345667788 55533 2 246688999998877
No 268
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=37.06 E-value=25 Score=31.95 Aligned_cols=22 Identities=18% Similarity=0.134 Sum_probs=16.2
Q ss_pred CCCCCCCeEEEcccccceeccc
Q 012437 156 HNPAGDRLIIFSDFDLTCTIVD 177 (463)
Q Consensus 156 ~~~~~~~~~ii~DFD~TiT~~D 177 (463)
-.|.....++++|-||||+..+
T Consensus 7 ~~~~~~~k~~~~D~Dgtl~~~~ 28 (166)
T TIGR01664 7 DGPKPQSKVAAFDLDGTLITTR 28 (166)
T ss_pred CCCCCcCcEEEEeCCCceEecC
Confidence 3464546678889999999754
No 269
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=36.95 E-value=16 Score=36.71 Aligned_cols=19 Identities=21% Similarity=0.043 Sum_probs=15.8
Q ss_pred CCCCeEEEcccccceeccc
Q 012437 159 AGDRLIIFSDFDLTCTIVD 177 (463)
Q Consensus 159 ~~~~~~ii~DFD~TiT~~D 177 (463)
|..+.+|+||.||||++.+
T Consensus 125 ~~~~~~i~~D~D~TL~~~~ 143 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDE 143 (303)
T ss_pred eeeccEEEEecCCCccCCC
Confidence 4567899999999998763
No 270
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=36.52 E-value=4.9e+02 Score=26.70 Aligned_cols=109 Identities=12% Similarity=0.123 Sum_probs=59.4
Q ss_pred CcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccc-cccCCCCcchHHHHHHHHHHhCCCCCceEEEEcC
Q 012437 306 ANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEI-IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD 384 (463)
Q Consensus 306 ~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~-~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGD 384 (463)
.++.|+=.|=-+-.+...|...|+..+.|+=....-..+. .-.+ ...--.|..|.+...+.+...+.. -++..+-.
T Consensus 29 ~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL-~Rq~l~~~~diG~~Ka~~a~~~l~~~np~--v~v~~~~~ 105 (355)
T PRK05597 29 AKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNL-HRQVIHSTAGVGQPKAESAREAMLALNPD--VKVTVSVR 105 (355)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEccccc-ccCcccChhHCCChHHHHHHHHHHHHCCC--cEEEEEEe
Confidence 4577776542245555566667876655443332211111 1111 111223567998888887776642 33433322
Q ss_pred ---CcccHHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceee
Q 012437 385 ---SVGDLLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFI 419 (463)
Q Consensus 385 ---s~tDl~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~ 419 (463)
..+....+..+| +|+.. + -.+-+.|.+++++++
T Consensus 106 ~i~~~~~~~~~~~~D--vVvd~~d~~~~r~~~n~~c~~~~ip~v 147 (355)
T PRK05597 106 RLTWSNALDELRDAD--VILDGSDNFDTRHLASWAAARLGIPHV 147 (355)
T ss_pred ecCHHHHHHHHhCCC--EEEECCCCHHHHHHHHHHHHHcCCCEE
Confidence 233456677788 45533 2 147788999999887
No 271
>TIGR03875 RNA_lig_partner RNA ligase partner, MJ_0950 family. This uncharacterized protein family is found almost perfectly in the same set of genomes as the Pab1020 family described by model TIGR01209. These pairs are found mostly in Archaea, but also in a few bacteria (e.g. Alkalilimnicola ehrlichei MLHE-1, Aquifex aeolicus). While the partner protein has been described as homodimeric ligase that has RNA circularization activity, the function of this protein (also called UPF0278) is unknown.
Probab=35.76 E-value=33 Score=32.42 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=33.9
Q ss_pred EcCCcccHHHhHhcCe--eEEEcCChhHHHHhhhhCceeee
Q 012437 382 IGDSVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIP 420 (463)
Q Consensus 382 IGDs~tDl~~l~~Adi--giv~~~~~~L~~~~~~~gi~~~p 420 (463)
+=||.+|+..+..|-- |+++.++-.+..+|++.|++|.+
T Consensus 154 iLdS~~DidvlaLA~ELda~lvTdD~giqn~A~~Lgi~~~~ 194 (206)
T TIGR03875 154 ILDSAEDLDVLLLAKELDAAVVSADEGIRKWAERLGLRFVD 194 (206)
T ss_pred ccCchhhHHHHHHHHHcCcEEEeCcHHHHHHHHHcCCeeec
Confidence 5599999999887733 78888888999999999999987
No 272
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=35.37 E-value=19 Score=32.12 Aligned_cols=14 Identities=21% Similarity=0.033 Sum_probs=12.0
Q ss_pred eEEEcccccceecc
Q 012437 163 LIIFSDFDLTCTIV 176 (463)
Q Consensus 163 ~~ii~DFD~TiT~~ 176 (463)
.+|++|.||||++.
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 37899999999974
No 273
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=35.24 E-value=31 Score=34.87 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=22.3
Q ss_pred ceEEEEcCCc-ccHHHhHhcCe-eEEEc
Q 012437 377 NLSVYIGDSV-GDLLCLLEADI-GIVIG 402 (463)
Q Consensus 377 ~~vIyIGDs~-tDl~~l~~Adi-giv~~ 402 (463)
.++++|||+. +|+.+...+|+ .|.+.
T Consensus 264 ~~~~mIGD~~~tDI~ga~~~G~~silV~ 291 (321)
T TIGR01456 264 HALYMVGDNPASDIIGAQNYGWFSCLVK 291 (321)
T ss_pred heEEEEcCChhhhhhhHHhCCceEEEec
Confidence 5899999998 99999999998 45553
No 274
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=34.64 E-value=95 Score=29.85 Aligned_cols=46 Identities=9% Similarity=0.046 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceE
Q 012437 291 CTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFS 340 (463)
Q Consensus 291 ~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~ 340 (463)
..+.|+.++++| +.++|.|+-- -..+...+++.+++..-|.+|-..
T Consensus 25 ~~~ai~~~~~~G---~~~~iaTGR~-~~~~~~~~~~l~~~~~~I~~NGa~ 70 (272)
T PRK10530 25 SLEALARAREAG---YKVIIVTGRH-HVAIHPFYQALALDTPAICCNGTY 70 (272)
T ss_pred HHHHHHHHHHCC---CEEEEEcCCC-hHHHHHHHHhcCCCCCEEEcCCcE
Confidence 345677889999 9999999863 555778888877653345555443
No 275
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=34.21 E-value=33 Score=39.72 Aligned_cols=16 Identities=25% Similarity=0.150 Sum_probs=14.0
Q ss_pred CCeEEEcccccceecc
Q 012437 161 DRLIIFSDFDLTCTIV 176 (463)
Q Consensus 161 ~~~~ii~DFD~TiT~~ 176 (463)
++.+|++||||||+..
T Consensus 595 ~~rlI~LDyDGTLlp~ 610 (854)
T PLN02205 595 TTRAILLDYDGTLMPQ 610 (854)
T ss_pred cCeEEEEecCCcccCC
Confidence 5789999999999954
No 276
>PRK10976 putative hydrolase; Provisional
Probab=33.47 E-value=1e+02 Score=29.69 Aligned_cols=46 Identities=2% Similarity=-0.116 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeece
Q 012437 290 GCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEF 339 (463)
Q Consensus 290 G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l 339 (463)
...+.|++++++| +.++|.|+-- ...+..+++..+++..-|.+|-.
T Consensus 23 ~~~~ai~~l~~~G---~~~~iaTGR~-~~~~~~~~~~l~~~~~~I~~NGa 68 (266)
T PRK10976 23 YAKETLKLLTARG---IHFVFATGRH-HVDVGQIRDNLEIKSYMITSNGA 68 (266)
T ss_pred HHHHHHHHHHHCC---CEEEEEcCCC-hHHHHHHHHhcCCCCeEEEcCCc
Confidence 3445678889999 9999999863 55677778877764323444443
No 277
>PRK04358 hypothetical protein; Provisional
Probab=32.41 E-value=36 Score=32.45 Aligned_cols=40 Identities=30% Similarity=0.442 Sum_probs=34.8
Q ss_pred EcCCcccHHHhHhcCe--eEEEcCChhHHHHhhhhCceeeec
Q 012437 382 IGDSVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIPL 421 (463)
Q Consensus 382 IGDs~tDl~~l~~Adi--giv~~~~~~L~~~~~~~gi~~~p~ 421 (463)
+=||.+|+..+..|-. |+++.++-.+..+|++.|+++.+-
T Consensus 158 ~ldS~~DidvlaLA~ELda~lvTdD~giqn~A~~LGI~~~~~ 199 (217)
T PRK04358 158 ILDSAEDLDVLLLAKELDAAVVSADEGIRKWAERLGLRFVDA 199 (217)
T ss_pred cccchhhHHHHHHHHHhCCEEEeCCHHHHHHHHHcCCeeecH
Confidence 6799999999888743 788888889999999999999874
No 278
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=32.39 E-value=1.1e+02 Score=29.77 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcc-eEEeece
Q 012437 291 CTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNAL-NVHANEF 339 (463)
Q Consensus 291 ~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~-~I~aN~l 339 (463)
..+.|+.++++| ++++|.|+. +-..+..++++.|++.. -|.+|--
T Consensus 29 ~~~ai~~l~~~G---i~~viaTGR-~~~~i~~~~~~l~~~~~~~I~~NGa 74 (271)
T PRK03669 29 AAPWLTRLREAQ---VPVILCSSK-TAAEMLPLQQTLGLQGLPLIAENGA 74 (271)
T ss_pred HHHHHHHHHHcC---CeEEEEcCC-CHHHHHHHHHHhCCCCCcEEEeCCC
Confidence 345678889999 999999987 36668888888887432 3445543
No 279
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=32.37 E-value=32 Score=32.97 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=36.4
Q ss_pred CCcchHHHHHHHHHHhCCCCCceEEEEcC----CcccHHHhHhcCe-eEEEcCChhHHHHhh
Q 012437 356 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSSSSLRRVGS 412 (463)
Q Consensus 356 ~g~~K~~~l~~l~~~~~~~~~~~vIyIGD----s~tDl~~l~~Adi-giv~~~~~~L~~~~~ 412 (463)
.|.||.-.|+.+... ....++++|| |-||.+...++++ |+.+.+..-..+.|+
T Consensus 159 ~GwDKty~Lr~l~~~----~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~DT~~~l~ 216 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE----GFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPEDTIKQLK 216 (220)
T ss_dssp TT-SGGGGGGGTTTT----T-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHHHHHHHH
T ss_pred CCccHHHHHHHHHhc----ccceEEEEehhccCCCCCceeeecCCccEEEeCCHHHHHHHHH
Confidence 467887777766542 1468999999 6799999999877 888877554554544
No 280
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=32.35 E-value=1.2e+02 Score=21.92 Aligned_cols=35 Identities=31% Similarity=0.480 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Q 012437 98 FQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 134 (463)
Q Consensus 98 f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~l 134 (463)
|.+...+++++++++-.. +-.++...+.|.+++++
T Consensus 1 fEe~~~~Le~Iv~~Le~~--~~sLdes~~lyeeg~~l 35 (53)
T PF02609_consen 1 FEEAMERLEEIVEKLESG--ELSLDESLKLYEEGMEL 35 (53)
T ss_dssp HHHHHHHHHHHHHHHHTT---S-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHH
Confidence 678888999999998642 33588899999999875
No 281
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=32.01 E-value=4e+02 Score=25.51 Aligned_cols=47 Identities=9% Similarity=0.017 Sum_probs=33.9
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEee
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHAN 337 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN 337 (463)
+.+...+.|+.++++| ++++|+|+.- -..+..+++..++...-|-+|
T Consensus 21 i~~~~~~al~~~~~~g---~~v~iaTGR~-~~~~~~~~~~l~~~~~~I~~N 67 (264)
T COG0561 21 ISPETKEALARLREKG---VKVVLATGRP-LPDVLSILEELGLDGPLITFN 67 (264)
T ss_pred cCHHHHHHHHHHHHCC---CEEEEECCCC-hHHHHHHHHHcCCCccEEEeC
Confidence 3444566788889999 9999999874 567888888888754233344
No 282
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=31.58 E-value=5.2e+02 Score=25.57 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=28.5
Q ss_pred HHHhHhcCe-eEEEcCC-----hhHHHHhhhhCceeeecCc
Q 012437 389 LLCLLEADI-GIVIGSS-----SSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 389 l~~l~~Adi-giv~~~~-----~~L~~~~~~~gi~~~p~~~ 423 (463)
+..+..+++ |+++.+= ..+...|+++|+.+++|-.
T Consensus 115 ~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lva 155 (265)
T COG0159 115 LRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVA 155 (265)
T ss_pred HHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeC
Confidence 557788898 9998663 3699999999999999864
No 283
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=31.38 E-value=1.2e+02 Score=28.08 Aligned_cols=48 Identities=13% Similarity=0.028 Sum_probs=32.1
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeec
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANE 338 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~ 338 (463)
+.+...+.|+.++++| +.+++.|+-- ..-+..+++.++++..-|..|-
T Consensus 16 i~~~~~~al~~l~~~G---i~~~~aTGR~-~~~~~~~~~~l~~~~~~i~~nG 63 (225)
T TIGR01482 16 INESALEAIRKAESVG---IPVVLVTGNS-VQFARALAKLIGTPDPVIAENG 63 (225)
T ss_pred cCHHHHHHHHHHHHCC---CEEEEEcCCc-hHHHHHHHHHhCCCCeEEEecC
Confidence 3444556678889899 9999999863 5557777777775433333443
No 284
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=31.37 E-value=23 Score=26.94 Aligned_cols=26 Identities=23% Similarity=0.494 Sum_probs=14.9
Q ss_pred HHHHHHHhCCCCCceEEEEcCCcccHHHhHh
Q 012437 364 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 394 (463)
Q Consensus 364 l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~ 394 (463)
++++++++ ..+||+||-..|++++..
T Consensus 7 VqQLLK~f-----G~~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 7 VQQLLKKF-----GIIIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHTT-----S-----S-HHHHHHHHHH
T ss_pred HHHHHHHC-----CEEEEeCChHHHHHHHHH
Confidence 35666654 468999999999999864
No 285
>PRK13689 hypothetical protein; Provisional
Probab=30.67 E-value=1.6e+02 Score=23.24 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=34.9
Q ss_pred cccCChHHHHHHHHHHHHHHHhh-------------------ccCCHHHHHHHHHHHHHHHHH
Q 012437 91 DNYSSESFQASALQNEDLLDKLS-------------------VSLTGEELDIIEKLYHQAMKL 134 (463)
Q Consensus 91 ~~y~s~~f~~~~~~~~~~ld~~~-------------------~~~~~~~~~~l~~~f~~a~~l 134 (463)
.-|+++.+++....+..+|++.- ...++++++.+.+-|.+|.+-
T Consensus 5 SKYsd~qvE~il~el~~VLeKH~Ap~DLSLMvLGN~vTnlln~~V~~~qR~~iAe~Fa~AL~~ 67 (75)
T PRK13689 5 SKYSDEQVEQLLAELLAVLEKHKAPTDLSLMVLGNMVTNLLNTSVAPAQRQAIAESFARALQS 67 (75)
T ss_pred ccccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Confidence 35888999999999999998742 234678899999999988753
No 286
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=30.54 E-value=4.1e+02 Score=25.57 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=58.3
Q ss_pred CcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCC
Q 012437 306 ANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS 385 (463)
Q Consensus 306 ~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs 385 (463)
.++.|+=.|=-+-.+-..|...|+..+.++=....-..+...-.+....--|..|.+.+.+.+.+.+.. -++..+-..
T Consensus 25 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~--v~i~~~~~~ 102 (240)
T TIGR02355 25 SRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPH--IAINPINAK 102 (240)
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCC--cEEEEEecc
Confidence 457777644225556666666787654443222111111111111111223567998888887776642 344444322
Q ss_pred ---cccHHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceeee
Q 012437 386 ---VGDLLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFIP 420 (463)
Q Consensus 386 ---~tDl~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~p 420 (463)
.++...+..+| +|+.. + ..|-++|.+++++++-
T Consensus 103 i~~~~~~~~~~~~D--lVvd~~D~~~~r~~ln~~~~~~~ip~v~ 144 (240)
T TIGR02355 103 LDDAELAALIAEHD--IVVDCTDNVEVRNQLNRQCFAAKVPLVS 144 (240)
T ss_pred CCHHHHHHHhhcCC--EEEEcCCCHHHHHHHHHHHHHcCCCEEE
Confidence 23334566778 45533 2 2477899999998883
No 287
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=30.01 E-value=26 Score=40.82 Aligned_cols=40 Identities=18% Similarity=0.109 Sum_probs=27.3
Q ss_pred CCCcchHHHHHHHHHHhCC-----CCCceEEEEcCCcc-cHHHhHh
Q 012437 355 ESPIDKVQAFNNTLEKYGT-----DRKNLSVYIGDSVG-DLLCLLE 394 (463)
Q Consensus 355 ~~g~~K~~~l~~l~~~~~~-----~~~~~vIyIGDs~t-Dl~~l~~ 394 (463)
..+.+|..++++++..... ...+-++.+||-.+ |=.|+..
T Consensus 764 P~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~ 809 (934)
T PLN03064 764 PVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTF 809 (934)
T ss_pred cCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHH
Confidence 3567899999999975421 12456889999653 7555554
No 288
>PF15565 Imm16: Immunity protein 16
Probab=28.32 E-value=80 Score=26.75 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHh
Q 012437 100 ASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEF 138 (463)
Q Consensus 100 ~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~F 138 (463)
+-++..++.|++++...+.+-...+-.+|....+.|++|
T Consensus 13 ~e~e~Fe~~L~~l~~~~d~~~I~~L~~~F~D~~d~eVmf 51 (106)
T PF15565_consen 13 EECEEFEEALNELAKYPDNDVIDDLCLIFDDETDHEVMF 51 (106)
T ss_pred HHHHHHHHHHHHHHhcCCHhHHHHHHHHhcCccchHHHH
Confidence 446888999999999999999999999999988888777
No 289
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=27.90 E-value=1.2e+02 Score=29.86 Aligned_cols=56 Identities=29% Similarity=0.474 Sum_probs=34.6
Q ss_pred HHhHhcCe-eEEEcCC-----hhHHHHhhhhCceeeecCchh--hHhHHhhhcCCCCCcccccCeEEEeCC
Q 012437 390 LCLLEADI-GIVIGSS-----SSLRRVGSQFGVTFIPLYPGL--VKKQKEYTEGSSSNWKEKSGILYTVSS 452 (463)
Q Consensus 390 ~~l~~Adi-giv~~~~-----~~L~~~~~~~gi~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~ly~~~~ 452 (463)
..+..+|+ |+++.+= ..+...|+++|+..++|-.-. ...++...+ ..+|-+|+|+.
T Consensus 109 ~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~-------~a~gFiY~vs~ 172 (259)
T PF00290_consen 109 KEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVAPTTPEERIKKIAK-------QASGFIYLVSR 172 (259)
T ss_dssp HHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEETTS-HHHHHHHHH-------H-SSEEEEESS
T ss_pred HHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHH-------hCCcEEEeecc
Confidence 34556888 8998652 368899999999999986421 122333221 13467888753
No 290
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=27.87 E-value=31 Score=31.44 Aligned_cols=15 Identities=20% Similarity=-0.020 Sum_probs=13.0
Q ss_pred CeEEEcccccceecc
Q 012437 162 RLIIFSDFDLTCTIV 176 (463)
Q Consensus 162 ~~~ii~DFD~TiT~~ 176 (463)
=.++|+|.|||+|+.
T Consensus 8 IkLli~DVDGvLTDG 22 (170)
T COG1778 8 IKLLILDVDGVLTDG 22 (170)
T ss_pred ceEEEEeccceeecC
Confidence 348999999999986
No 291
>COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C [Coenzyme metabolism]
Probab=27.83 E-value=4.5e+02 Score=25.57 Aligned_cols=113 Identities=12% Similarity=0.034 Sum_probs=67.8
Q ss_pred cCCCCccc--ccCCChhHHHHHHHHHHHhcCCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHHHHHHHHHHhhccCC
Q 012437 3 EWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNAN 80 (463)
Q Consensus 3 ~~gi~~~~--~~~~~~~~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y~~~~~~~~~~~~~~ 80 (463)
.+|+++++ ..+|.|.++.=.+.-...++++. .++++++|+.-+..=-.| ..+...
T Consensus 103 AlGvs~eei~s~eplp~~~~av~~~~~~a~~~s------------------~~~~~aslyt~El~apri---~~~ki~-- 159 (242)
T COG5424 103 ALGVSREEILSHEPLPSTRFAVDTWVRFATEKS------------------WLEGAASLYTYELVAPRI---SVEKIS-- 159 (242)
T ss_pred HcCCCHHHHhhcCCCHHHHHHHHHHHHHhcchh------------------HHHHHHHHHHHHhhccHH---HHHHcc--
Confidence 57999876 55699999988888888886544 467777776544332222 222221
Q ss_pred CCcccccccccccCChHH--------HHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 012437 81 EGNHPYTKWIDNYSSESF--------QASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 142 (463)
Q Consensus 81 ~~~~~y~~Wi~~y~s~~f--------~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~~~ 142 (463)
.-+.|..|++ +..-.| ..-+....+++.+++. +-|..+++..+-.+++..=+.|-++.
T Consensus 160 -gl~~~~~~~~-~a~~~yf~~h~eaD~~Ha~Ealkiv~~~~~--t~E~~~~~~~~~~~~~D~lw~fLda~ 225 (242)
T COG5424 160 -GLPYFNGFSD-AAAYAYFREHLEADVRHAEEALKIVLELAG--TRELQDQVLDALQKSLDVLWLFLDAR 225 (242)
T ss_pred -CchhhcCcch-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2244566665 222111 2233444445555543 23556677888888888888888865
No 292
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=27.79 E-value=1.6e+02 Score=29.77 Aligned_cols=44 Identities=5% Similarity=-0.034 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeec
Q 012437 291 CTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANE 338 (463)
Q Consensus 291 ~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~ 338 (463)
..+.|++++++| +++++.|+.. ..-+..+.+..++..--|..|-
T Consensus 23 a~~aL~~Lk~~G---I~vVlaTGRt-~~ev~~l~~~Lgl~~p~I~eNG 66 (302)
T PRK12702 23 ARQALAALERRS---IPLVLYSLRT-RAQLEHLCRQLRLEHPFICEDG 66 (302)
T ss_pred HHHHHHHHHHCC---CEEEEEcCCC-HHHHHHHHHHhCCCCeEEEeCC
Confidence 456788899999 9999999985 5557777787776543344443
No 293
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=27.77 E-value=3.2e+02 Score=30.53 Aligned_cols=116 Identities=15% Similarity=0.071 Sum_probs=57.3
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcc---ccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCC-C-cchHHHHH
Q 012437 291 CTTFFQKVVKNENLNANVHVLSY---CWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVES-P-IDKVQAFN 365 (463)
Q Consensus 291 ~~efl~~l~~~g~~~~~~~IvS~---g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~-g-~~K~~~l~ 365 (463)
..+.++...+.| -+++++|+ || ++.-.++...+.+ +.++.-.+.. ..+.+...+.. . ..+...++
T Consensus 467 ~~~~l~~a~~~~---kgvi~~t~H~gnw--E~~~~~~~~~~~~-~~~i~r~~~~----~R~~~g~~~i~~~~~~~~~~~r 536 (656)
T PRK15174 467 VEQFFQRLQLDQ---RGCIIVSAHLGAM--YAGPMILSLLEMN-SKWVASTPGV----LKGGYGERLISVSDKSEADVVR 536 (656)
T ss_pred HHHHHHHHHhcC---CCEEEEecCcchh--hHHHHHHHHcCCC-ceeeecchHH----HHHhcCCceeccCCCCcchHHH
Confidence 344455566566 67889986 66 5655566655533 2222222221 11111112221 0 11222333
Q ss_pred HHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-----ChhHHHHhhhhCceeeecCc
Q 012437 366 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-----SSSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 366 ~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-----~~~L~~~~~~~gi~~~p~~~ 423 (463)
.+.+..+ .+.-+.+.+|-...- -++-+-|.. ......++.+++.+++|+..
T Consensus 537 ~i~~aLk--~g~~v~il~Dq~~~~-----~~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~ 592 (656)
T PRK15174 537 ACMQTLH--SGQSLVVAIDGALNL-----SAPTIDFFGQQITYSTFCSRLAWKMHLPTVFSVP 592 (656)
T ss_pred HHHHHHH--cCCeEEEEeCCCCCC-----CCceeccCCCccCcCcHHHHHHHHHCCCEEEeEE
Confidence 3433222 135677899987421 122222222 23566888999999998764
No 294
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=27.44 E-value=1.5e+02 Score=28.85 Aligned_cols=43 Identities=14% Similarity=0.354 Sum_probs=32.0
Q ss_pred ChhHHHHhhhhCceeeecCchhhHhHHhhhcCCCCCcccc-cCeEEEeCCHHHHHHhH
Q 012437 404 SSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEK-SGILYTVSSWAEVHAFI 460 (463)
Q Consensus 404 ~~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~~~W~~i~~~~ 460 (463)
..+..+.|++.||+|+.|.+ +.|... +..++.|+||+|..+.+
T Consensus 82 s~na~~a~~~~~ipylR~eR--------------p~~~~~~~~~~~~v~~~~eA~~~l 125 (249)
T PF02571_consen 82 SQNAIEACRELGIPYLRFER--------------PSWQPEPDDNWHYVDSYEEAAELL 125 (249)
T ss_pred HHHHHHHHhhcCcceEEEEc--------------CCcccCCCCeEEEeCCHHHHHHHH
Confidence 35899999999999999973 334432 23488888888888776
No 295
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=26.54 E-value=5.8e+02 Score=24.49 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=60.9
Q ss_pred HHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeecccc-ccCCCCcchHHHHHHHHHHh
Q 012437 293 TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII-EKVESPIDKVQAFNNTLEKY 371 (463)
Q Consensus 293 efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~-~~~~~g~~K~~~l~~l~~~~ 371 (463)
+-++.|++ ..+.|+=.|=-+-.+-..|...|+..+.++=+...-..+. .-.+. ..-.-|..|.+++.+.+...
T Consensus 4 e~~~~L~~-----~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNl-nRq~~~~~~diG~~Kae~~~~~l~~i 77 (231)
T cd00755 4 EGLEKLRN-----AHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNL-NRQIHALLSTVGKPKVEVMAERIRDI 77 (231)
T ss_pred HHHHHHhC-----CCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhh-cchhCcChhhCCCcHHHHHHHHHHHH
Confidence 33455554 3566665542255556666667875544443332211111 00111 11223567999988888776
Q ss_pred CCCCCceEEEEcCCcc--cHHHhH--hcCeeEEEcC-C-----hhHHHHhhhhCceeee
Q 012437 372 GTDRKNLSVYIGDSVG--DLLCLL--EADIGIVIGS-S-----SSLRRVGSQFGVTFIP 420 (463)
Q Consensus 372 ~~~~~~~vIyIGDs~t--Dl~~l~--~Adigiv~~~-~-----~~L~~~~~~~gi~~~p 420 (463)
+.. -++..+=+-.+ .+..+. ..| +|+.+ + -.|.++|++++++++-
T Consensus 78 nP~--~~V~~~~~~i~~~~~~~l~~~~~D--~VvdaiD~~~~k~~L~~~c~~~~ip~I~ 132 (231)
T cd00755 78 NPE--CEVDAVEEFLTPDNSEDLLGGDPD--FVVDAIDSIRAKVALIAYCRKRKIPVIS 132 (231)
T ss_pred CCC--cEEEEeeeecCHhHHHHHhcCCCC--EEEEcCCCHHHHHHHHHHHHHhCCCEEE
Confidence 642 33433332222 122232 356 55544 2 2589999999999983
No 296
>PRK06153 hypothetical protein; Provisional
Probab=26.53 E-value=5.8e+02 Score=26.77 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=73.2
Q ss_pred hhcCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEE-cc-ceeecccc-ccCCCCc
Q 012437 282 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSF-KE-SISTGEII-EKVESPI 358 (463)
Q Consensus 282 ~~~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~-~~-g~~tG~~~-~~~~~g~ 358 (463)
.+...-|-|..++-++|+.. .+.||=.|=.+-+|-..|.+.|+..+.++=....- .+ ....|-+. ..+....
T Consensus 158 ~dt~s~R~~i~~~q~kL~~~-----~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~ 232 (393)
T PRK06153 158 PDTASSRAGIGALSAKLEGQ-----RIAIIGLGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAP 232 (393)
T ss_pred hhhhccccChHHHHHHHhhC-----cEEEEcCCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcc
Confidence 44567787888888888864 57777765458888888888886544332211110 01 11112111 1122233
Q ss_pred chHHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceeeec
Q 012437 359 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFIPL 421 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~p~ 421 (463)
-|++++.+.+.+.+.+-.....+| |..+ +..+..+| +||.. + ..+-++|.+++++++-.
T Consensus 233 ~KVevaa~rl~~in~~I~~~~~~I-~~~n-~~~L~~~D--iV~dcvDn~~aR~~ln~~a~~~gIP~Id~ 297 (393)
T PRK06153 233 KKVDYFKSRYSNMRRGIVPHPEYI-DEDN-VDELDGFT--FVFVCVDKGSSRKLIVDYLEALGIPFIDV 297 (393)
T ss_pred hHHHHHHHHHHHhCCeEEEEeecC-CHHH-HHHhcCCC--EEEEcCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 689888877765543111111234 3222 34566677 55533 2 35778999999988854
No 297
>COG0794 GutQ Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane]
Probab=26.27 E-value=1.1e+02 Score=28.94 Aligned_cols=48 Identities=23% Similarity=0.412 Sum_probs=40.0
Q ss_pred CceEEEEcCC---cccHHHhHhcCeeEEEcCCh------hHHHHhhhhCceeeecCc
Q 012437 376 KNLSVYIGDS---VGDLLCLLEADIGIVIGSSS------SLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 376 ~~~vIyIGDs---~tDl~~l~~Adigiv~~~~~------~L~~~~~~~gi~~~p~~~ 423 (463)
+..++++|=+ .+|++|+..=|+=|++..+. .+..++++.|++++-+..
T Consensus 65 G~~a~fv~p~ea~hgdlg~i~~~DvviaiS~SGeT~el~~~~~~aK~~g~~liaiT~ 121 (202)
T COG0794 65 GTPAFFVGPAEALHGDLGMITPGDVVIAISGSGETKELLNLAPKAKRLGAKLIAITS 121 (202)
T ss_pred CCceEEecCchhccCCccCCCCCCEEEEEeCCCcHHHHHHHHHHHHHcCCcEEEEeC
Confidence 4689999944 89999999999877775542 689999999999998874
No 298
>COG0678 AHP1 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=26.04 E-value=1.6e+02 Score=26.64 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=31.9
Q ss_pred CChhHHHHHHHHHHcCCCCC-cEEEEccccCHHHHHHHHHhcCCC
Q 012437 287 LQDGCTTFFQKVVKNENLNA-NVHVLSYCWCGDLIRASFSSAGLN 330 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~-~~~IvS~g~s~~~I~~~l~~~gl~ 330 (463)
=-||+.++...++++| + .+++||.|= ......+.+..|..
T Consensus 57 hlPgY~~~~d~f~~kG---VD~I~cVSVND-~FVm~AWak~~g~~ 97 (165)
T COG0678 57 HLPGYLELADEFKAKG---VDEIYCVSVND-AFVMNAWAKSQGGE 97 (165)
T ss_pred cCccHHHHHHHHHHcC---CceEEEEEeCc-HHHHHHHHHhcCCC
Confidence 3589999999999998 5 588999983 66688888877765
No 299
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=25.51 E-value=37 Score=30.86 Aligned_cols=16 Identities=25% Similarity=0.131 Sum_probs=13.0
Q ss_pred CCeEEEcccccceecc
Q 012437 161 DRLIIFSDFDLTCTIV 176 (463)
Q Consensus 161 ~~~~ii~DFD~TiT~~ 176 (463)
+..+++||.||||+..
T Consensus 2 ~~~~~~~d~~~t~~~~ 17 (181)
T PRK08942 2 SMKAIFLDRDGVINVD 17 (181)
T ss_pred CccEEEEECCCCcccC
Confidence 4568999999999653
No 300
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=24.80 E-value=1.7e+02 Score=28.10 Aligned_cols=37 Identities=5% Similarity=-0.102 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 012437 290 GCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN 330 (463)
Q Consensus 290 G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~ 330 (463)
...+.|++++++| +.++|.|+-. -.-+..++++.+++
T Consensus 24 ~~~~ai~~l~~~G---~~~~iaTGR~-~~~~~~~~~~l~~~ 60 (270)
T PRK10513 24 AVKQAIAAARAKG---VNVVLTTGRP-YAGVHRYLKELHME 60 (270)
T ss_pred HHHHHHHHHHHCC---CEEEEecCCC-hHHHHHHHHHhCCC
Confidence 3446688899999 9999999864 55677888877764
No 301
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=24.60 E-value=1.6e+02 Score=26.82 Aligned_cols=59 Identities=14% Similarity=0.355 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCCCceEEEEcCCcccHHHhHh----cCeeEEEcCChhHHHHhhhhCceeeecCchhh
Q 012437 361 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE----ADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 426 (463)
Q Consensus 361 ~~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~----Adigiv~~~~~~L~~~~~~~gi~~~p~~~~~~ 426 (463)
...+.+++. -.-.+|.=++..|+..... .|+.+++|+. ...++|+++|++.+++.++.-
T Consensus 92 ~~~~~~ll~------~~i~~~~~~~~~e~~~~i~~~~~~G~~viVGg~-~~~~~A~~~gl~~v~i~sg~e 154 (176)
T PF06506_consen 92 LESIEELLG------VDIKIYPYDSEEEIEAAIKQAKAEGVDVIVGGG-VVCRLARKLGLPGVLIESGEE 154 (176)
T ss_dssp HHHHHHHHT-------EEEEEEESSHHHHHHHHHHHHHTT--EEEESH-HHHHHHHHTTSEEEESS--HH
T ss_pred HHHHHHHhC------CceEEEEECCHHHHHHHHHHHHHcCCcEEECCH-HHHHHHHHcCCcEEEEEecHH
Confidence 555666663 1345566688889887664 4778999776 568899999999999987544
No 302
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=24.39 E-value=7.2e+02 Score=24.80 Aligned_cols=112 Identities=14% Similarity=0.135 Sum_probs=57.0
Q ss_pred CcEEEEccc-cCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcC
Q 012437 306 ANVHVLSYC-WCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD 384 (463)
Q Consensus 306 ~~~~IvS~g-~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGD 384 (463)
.++.|+-.| . +--|..-|...|+..+.|+=+...-..+...--+..+---|..|.++..+.+++.|. .-++-.+ +
T Consensus 20 s~VLIvG~gGL-G~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp--~V~V~~~-~ 95 (286)
T cd01491 20 SNVLISGLGGL-GVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNP--YVPVTVS-T 95 (286)
T ss_pred CcEEEEcCCHH-HHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCC--CCEEEEE-e
Confidence 346665443 3 222333334457766655554433222211111111112245688877777777664 2333333 2
Q ss_pred CcccHHHhHhcCeeEEEcCC-----hhHHHHhhhhCceeeecC
Q 012437 385 SVGDLLCLLEADIGIVIGSS-----SSLRRVGSQFGVTFIPLY 422 (463)
Q Consensus 385 s~tDl~~l~~Adigiv~~~~-----~~L~~~~~~~gi~~~p~~ 422 (463)
+..|-.-+...|+ |+.... -.+-++|++++++|+--.
T Consensus 96 ~~~~~~~l~~fdv-VV~~~~~~~~~~~in~~c~~~~ipfI~a~ 137 (286)
T cd01491 96 GPLTTDELLKFQV-VVLTDASLEDQLKINEFCHSPGIKFISAD 137 (286)
T ss_pred ccCCHHHHhcCCE-EEEecCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 2345566777884 333332 247789999999888543
No 303
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=23.96 E-value=27 Score=32.15 Aligned_cols=88 Identities=15% Similarity=0.163 Sum_probs=48.4
Q ss_pred CCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHH---HHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchH
Q 012437 285 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL---IRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKV 361 (463)
Q Consensus 285 i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~---I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 361 (463)
..++.+++..|..++++. +++-+++-= .++ -..+|....+ ....+. +....+|+
T Consensus 71 ~l~~q~v~~~L~~~~e~~----~L~~itar~-~dl~~iT~~~l~~q~i-----h~~~l~-------------i~g~h~KV 127 (194)
T COG5663 71 ALLAQLVKQVLPSLKEEH----RLIYITARK-ADLTRITYAWLFIQNI-----HYDHLE-------------IVGLHHKV 127 (194)
T ss_pred HHHHHHHHHHhHHHHhhc----eeeeeehhh-HHHHHHHHHHHHHhcc-----chhhhh-------------hhcccccc
Confidence 456677777888888764 666666542 333 2233433221 111111 22234576
Q ss_pred HHHHHHHHHhCCCCCceEEEEcCCcccHHHhHh-cCeeEEEcCC
Q 012437 362 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE-ADIGIVIGSS 404 (463)
Q Consensus 362 ~~l~~l~~~~~~~~~~~vIyIGDs~tDl~~l~~-Adigiv~~~~ 404 (463)
..++... --+++-|+..-..++.. +++.++.-+.
T Consensus 128 ~~vrth~---------idlf~ed~~~na~~iAk~~~~~vilins 162 (194)
T COG5663 128 EAVRTHN---------IDLFFEDSHDNAGQIAKNAGIPVILINS 162 (194)
T ss_pred hhhHhhc---------cCccccccCchHHHHHHhcCCcEEEecC
Confidence 6555322 23678888777666665 8887666443
No 304
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=23.81 E-value=42 Score=30.47 Aligned_cols=13 Identities=46% Similarity=0.353 Sum_probs=11.2
Q ss_pred eEEEcccccceec
Q 012437 163 LIIFSDFDLTCTI 175 (463)
Q Consensus 163 ~~ii~DFD~TiT~ 175 (463)
.++++|.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 4789999999984
No 305
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=23.57 E-value=4e+02 Score=25.82 Aligned_cols=109 Identities=14% Similarity=0.190 Sum_probs=56.0
Q ss_pred CcEEEEcc-----ccCHHHHHHHHHhcCCCcceEEe-eceEEc-cceeeccccccCCCCcchHHHHHHHHHHhCCCCCce
Q 012437 306 ANVHVLSY-----CWCGDLIRASFSSAGLNALNVHA-NEFSFK-ESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNL 378 (463)
Q Consensus 306 ~~~~IvS~-----g~s~~~I~~~l~~~gl~~~~I~a-N~l~~~-~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~ 378 (463)
.++..|+. +|..++++.+.+.+|++. .|+. +...+. +....|.-.+ ..+..-+...+.++.... +..
T Consensus 60 ~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~-~v~~~~~~~~~~~~~~~~~~~c-~~c~~~R~~~l~~~a~~~----g~~ 133 (258)
T PRK10696 60 FELVAVNLDQKQPGFPEHVLPEYLESLGVPY-HIEEQDTYSIVKEKIPEGKTTC-SLCSRLRRGILYRTAREL----GAT 133 (258)
T ss_pred eEEEEEEecCCCCCCCHHHHHHHHHHhCCCE-EEEEecchhhhhhhhccCCChh-HHHHHHHHHHHHHHHHHc----CCC
Confidence 45666663 455677788888888753 2322 111110 0111111000 011122344555555543 356
Q ss_pred EEEEcCCcccHHH------hHh---cC--------ee-E-EE-----cCChhHHHHhhhhCceeee
Q 012437 379 SVYIGDSVGDLLC------LLE---AD--------IG-I-VI-----GSSSSLRRVGSQFGVTFIP 420 (463)
Q Consensus 379 vIyIGDs~tDl~~------l~~---Ad--------ig-i-v~-----~~~~~L~~~~~~~gi~~~p 420 (463)
.|+.|-..+|..- +.. ++ .| + ++ -.+..+.++|+++|++++|
T Consensus 134 ~Ia~GH~~dD~~Et~l~nl~rg~~l~~m~~~~~~~~~~i~iiRPLl~~~k~eI~~y~~~~~lp~~~ 199 (258)
T PRK10696 134 KIALGHHRDDILETLFLNMFYGGKLKAMPPKLLSDDGKHIVIRPLAYVAEKDIIKFAEAKEFPIIP 199 (258)
T ss_pred EEEEcCchHHHHHHHHHHHHhCCcccccCCeeecCCCceeEEecCccCCHHHHHHHHHHcCCCEee
Confidence 8999999999652 110 11 01 1 22 2235799999999999885
No 306
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=23.27 E-value=45 Score=33.28 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=23.4
Q ss_pred HHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCC
Q 012437 295 FQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLN 330 (463)
Q Consensus 295 l~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~ 330 (463)
|..|+++| --+++=|.| +++-+...++..++.
T Consensus 151 L~~Lk~~g---~vLvLWSyG-~~eHV~~sl~~~~L~ 182 (297)
T PF05152_consen 151 LRELKEQG---CVLVLWSYG-NREHVRHSLKELKLE 182 (297)
T ss_pred HHHHHHcC---CEEEEecCC-CHHHHHHHHHHhCCc
Confidence 45567777 677788888 478888888877754
No 307
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=22.32 E-value=1.8e+02 Score=28.63 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=26.6
Q ss_pred HHHhHhcCe-eEEEcCC-----hhHHHHhhhhCceeeecCc
Q 012437 389 LLCLLEADI-GIVIGSS-----SSLRRVGSQFGVTFIPLYP 423 (463)
Q Consensus 389 l~~l~~Adi-giv~~~~-----~~L~~~~~~~gi~~~p~~~ 423 (463)
+.-+..||+ |+++.+- ..+.+.|+++|+..+++-.
T Consensus 112 ~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~ 152 (263)
T CHL00200 112 IKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA 152 (263)
T ss_pred HHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC
Confidence 445567888 8888663 3688899999999998863
No 308
>PRK12496 hypothetical protein; Provisional
Probab=22.16 E-value=66 Score=29.33 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=31.7
Q ss_pred CcccHHHhHhcCe--eEEEcCChhHHHHhhhhCceeeecC
Q 012437 385 SVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIPLY 422 (463)
Q Consensus 385 s~tDl~~l~~Adi--giv~~~~~~L~~~~~~~gi~~~p~~ 422 (463)
|.+|+..+..|-. |+++-++-.+..+|+..|+++.++.
T Consensus 77 s~~D~~~iaLA~el~~~lvtDD~~~~~vA~~lgi~v~~~~ 116 (164)
T PRK12496 77 SNTDIEVLALALELNGTLYTDDYGIQNVAKKLNIKFENIK 116 (164)
T ss_pred chhhHHHHHHHHHhCCcEECcHHHHHHHHHHcCCeEeccc
Confidence 6678777776633 7888888899999999999999987
No 309
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=22.13 E-value=1.2e+02 Score=33.82 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=32.7
Q ss_pred cCCCChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHh
Q 012437 284 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS 326 (463)
Q Consensus 284 ~i~lr~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~ 326 (463)
-++|||++.+||+.+.+. .+++|.+-|- ..|...+++-
T Consensus 199 ~vKlRP~~~efL~~~skl----femhVyTmg~-R~YA~~i~~l 236 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL----FEMHVYTMGT-RDYALEIAKL 236 (635)
T ss_pred EEEeCccHHHHHHHHHhh----ceeEEEeccc-hHHHHHHHHH
Confidence 479999999999999975 8999999994 8888877763
No 310
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=21.97 E-value=3.2e+02 Score=29.31 Aligned_cols=123 Identities=21% Similarity=0.187 Sum_probs=76.9
Q ss_pred hcCCCChh--HHHHHHHHHHcCCCCCcEEEEccc-cCHHHHHHHHHhcCCCcceEEeeceEEccceeecccc-ccCCCCc
Q 012437 283 ERLSLQDG--CTTFFQKVVKNENLNANVHVLSYC-WCGDLIRASFSSAGLNALNVHANEFSFKESISTGEII-EKVESPI 358 (463)
Q Consensus 283 ~~i~lr~G--~~efl~~l~~~g~~~~~~~IvS~g-~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~-~~~~~g~ 358 (463)
++..|.|. ..++++.+.+++ -+|++||+= +...+++.+|...|.+. .|-..+. .|++. .++
T Consensus 94 EKevLypn~~~~eL~e~ai~n~---krVIlISDMYlps~Il~~~L~s~g~d~----~nipiY~----S~e~rl~Kn---- 158 (635)
T COG5610 94 EKEVLYPNKKNIELVEEAIKNE---KRVILISDMYLPSSILRTFLNSFGPDF----NNIPIYM----SSEFRLKKN---- 158 (635)
T ss_pred ceeEeeccccchHHHHHHHhCC---CeEEEEecccCcHHHHHHHHHhcCCCc----cCceeee----cceeehhcc----
Confidence 34556665 689999999998 899999984 35678999998888532 2221221 11111 111
Q ss_pred chHHHHHHHHHHhCCCCCceEEEEcCC-cccHHHhHhcCeeEEEcCChhHHHHhhhhCceeeecCch
Q 012437 359 DKVQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPG 424 (463)
Q Consensus 359 ~K~~~l~~l~~~~~~~~~~~vIyIGDs-~tDl~~l~~Adigiv~~~~~~L~~~~~~~gi~~~p~~~~ 424 (463)
-...+..++...+.+ ....+-+||- ..|..+.+.-||...+. .+.|. ..+++.++...+...
T Consensus 159 -Sg~LFk~Vlk~EnVd-~~~w~H~GDN~~aD~l~pk~LgI~Tlf~-~s~l~-~~ee~~~k~k~~~~~ 221 (635)
T COG5610 159 -SGNLFKAVLKLENVD-PKKWIHCGDNWVADYLKPKNLGISTLFY-ISQLL-PYEEFALKRKSLDMD 221 (635)
T ss_pred -cchHHHHHHhhcCCC-hhheEEecCchhhhhcCccccchhHHHH-HHHhh-hHhhhcccccccChH
Confidence 113445555555553 5678899995 67888888888765553 43443 446677777777643
No 311
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=21.71 E-value=1.3e+02 Score=26.87 Aligned_cols=45 Identities=16% Similarity=0.029 Sum_probs=31.7
Q ss_pred ChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCCCcceEEeec
Q 012437 288 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGLNALNVHANE 338 (463)
Q Consensus 288 r~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~ 338 (463)
..+..++=+.|++.| ++++|+.+.. .+.+..++++.++ ..|++|+
T Consensus 52 ~~sL~~L~~~L~~~g---~~L~v~~g~~-~~~l~~l~~~~~~--~~V~~~~ 96 (165)
T PF00875_consen 52 LESLADLQESLRKLG---IPLLVLRGDP-EEVLPELAKEYGA--TAVYFNE 96 (165)
T ss_dssp HHHHHHHHHHHHHTT---S-EEEEESSH-HHHHHHHHHHHTE--SEEEEE-
T ss_pred HHHHHHHHHHHHhcC---cceEEEecch-HHHHHHHHHhcCc--CeeEecc
Confidence 334555666777778 9999999884 7788888887764 5678876
No 312
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=21.54 E-value=6.9e+02 Score=23.58 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=57.2
Q ss_pred CcEEEEccccCHHHHHHHHHhcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHHHHHHhCCCCCceEEEEcCC
Q 012437 306 ANVHVLSYCWCGDLIRASFSSAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS 385 (463)
Q Consensus 306 ~~~~IvS~g~s~~~I~~~l~~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~l~~~~~~~~~~~vIyIGDs 385 (463)
.++.|+=.|=-+-.+-..|...|+..+.++=+...-..+.....+...--.|..|.+++.+.+.+.+.. -++-.+=..
T Consensus 22 ~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~--~~i~~~~~~ 99 (228)
T cd00757 22 ARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPD--VEIEAYNER 99 (228)
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCC--CEEEEecce
Confidence 457777654224445555555776554444333221111111111111123667999888888776642 233333222
Q ss_pred ---cccHHHhHhcCeeEEEcC-C-----hhHHHHhhhhCceeeec
Q 012437 386 ---VGDLLCLLEADIGIVIGS-S-----SSLRRVGSQFGVTFIPL 421 (463)
Q Consensus 386 ---~tDl~~l~~Adigiv~~~-~-----~~L~~~~~~~gi~~~p~ 421 (463)
.+....+..+|+ |+.. + ..+.++|.+++++++--
T Consensus 100 i~~~~~~~~~~~~Dv--Vi~~~d~~~~r~~l~~~~~~~~ip~i~~ 142 (228)
T cd00757 100 LDAENAEELIAGYDL--VLDCTDNFATRYLINDACVKLGKPLVSG 142 (228)
T ss_pred eCHHHHHHHHhCCCE--EEEcCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 222234556784 4423 2 24788899999988743
No 313
>PLN02591 tryptophan synthase
Probab=21.47 E-value=1.8e+02 Score=28.53 Aligned_cols=34 Identities=24% Similarity=0.449 Sum_probs=26.3
Q ss_pred HHHhHhcCe-eEEEcCC-----hhHHHHhhhhCceeeecC
Q 012437 389 LLCLLEADI-GIVIGSS-----SSLRRVGSQFGVTFIPLY 422 (463)
Q Consensus 389 l~~l~~Adi-giv~~~~-----~~L~~~~~~~gi~~~p~~ 422 (463)
+..+..||+ |+++.+= ..+.+.|+++|+..+++-
T Consensus 99 ~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv 138 (250)
T PLN02591 99 MATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLT 138 (250)
T ss_pred HHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 345567787 8888652 378889999999999886
No 314
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=21.13 E-value=7.4e+02 Score=23.76 Aligned_cols=103 Identities=14% Similarity=0.237 Sum_probs=56.0
Q ss_pred hhHHHHHHHHHHcCCCCCcEE-EEccccCHHHHHHHHH-hcCCCcceEEeeceEEccceeeccccccCCCCcchHHHHHH
Q 012437 289 DGCTTFFQKVVKNENLNANVH-VLSYCWCGDLIRASFS-SAGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNN 366 (463)
Q Consensus 289 ~G~~efl~~l~~~g~~~~~~~-IvS~g~s~~~I~~~l~-~~gl~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~ 366 (463)
+...++++.++++| .+.+ +++-+-+.+.|+.++. ..|+ +.+++- .+ .||.-........+|.+.+++
T Consensus 116 ee~~~~~~~~~~~g---~~~i~~i~P~T~~~~i~~i~~~~~~~--vy~~s~-----~g-~tG~~~~~~~~~~~~i~~lr~ 184 (242)
T cd04724 116 EEAEEFREAAKEYG---LDLIFLVAPTTPDERIKKIAELASGF--IYYVSR-----TG-VTGARTELPDDLKELIKRIRK 184 (242)
T ss_pred HHHHHHHHHHHHcC---CcEEEEeCCCCCHHHHHHHHhhCCCC--EEEEeC-----CC-CCCCccCCChhHHHHHHHHHh
Confidence 35678899999988 6544 4777766677888877 3332 322221 11 122111011122244444443
Q ss_pred HHHHhCCCCCceEEEEcCCcc---cHHHhHh-cCeeEEEcCChhHHHHhhh
Q 012437 367 TLEKYGTDRKNLSVYIGDSVG---DLLCLLE-ADIGIVIGSSSSLRRVGSQ 413 (463)
Q Consensus 367 l~~~~~~~~~~~vIyIGDs~t---Dl~~l~~-Adigiv~~~~~~L~~~~~~ 413 (463)
+. ..-|.+|=|++ +...+.. || |++++. .+.+...+
T Consensus 185 ~~--------~~pI~vggGI~~~e~~~~~~~~AD-gvVvGS--aiv~~~~~ 224 (242)
T cd04724 185 YT--------DLPIAVGFGISTPEQAAEVAKYAD-GVIVGS--ALVKIIEE 224 (242)
T ss_pred cC--------CCcEEEEccCCCHHHHHHHHccCC-EEEECH--HHHHHHHh
Confidence 21 34588899998 4545544 55 788863 45555444
No 315
>cd03769 SR_IS607_transposase_like Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subfamily is composed of proteins that catalyze the transposition of insertion sequence (IS) elements such as IS607 from Helicobacter and IS1535 from Mycobacterium, and similar proteins from other bacteria and several archaeal species. IS elements are DNA segments that move to new sites in prokaryotic and eukaryotic genomes causing insertion mutations and gene rearrangements.
Probab=20.60 E-value=2.2e+02 Score=24.74 Aligned_cols=39 Identities=18% Similarity=0.358 Sum_probs=26.2
Q ss_pred CChhHHHHHHHHHHcCCCCCcEEEEcc--ccC---HHHHHHHHHhcC
Q 012437 287 LQDGCTTFFQKVVKNENLNANVHVLSY--CWC---GDLIRASFSSAG 328 (463)
Q Consensus 287 lr~G~~efl~~l~~~g~~~~~~~IvS~--g~s---~~~I~~~l~~~g 328 (463)
=|||+.++++.+++.. ++++||.. -++ .+++...+..+|
T Consensus 47 ~Rp~l~~ll~~i~~g~---~d~lvV~~ldRl~R~~~d~~~~~l~~~g 90 (134)
T cd03769 47 KRKGLLKLLEDVLAGK---VERVVITYKDRLARFGFELLEELFKAYG 90 (134)
T ss_pred CCHHHHHHHHHHHcCC---CCEEEEEeccHHHHhhHHHHHHHHHHCC
Confidence 4999999999998765 67777753 111 344555555555
No 316
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=20.53 E-value=3.1e+02 Score=27.40 Aligned_cols=39 Identities=18% Similarity=0.357 Sum_probs=30.3
Q ss_pred ChhHHHHHHHHHHcCCCCCcEEEEccccCHHHHHHHHHhcCC
Q 012437 288 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSAGL 329 (463)
Q Consensus 288 r~G~~efl~~l~~~g~~~~~~~IvS~g~s~~~I~~~l~~~gl 329 (463)
-+|+..+-+.|++-| .++.||++-.+...++..++..+.
T Consensus 62 P~GA~aLa~aL~~lG---~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 62 PPGAAALARALQALG---KEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred hHHHHHHHHHHHHcC---CeEEEEECHHHHHHHHHHHHHHhh
Confidence 357888888898877 899999987667777777765553
No 317
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=20.45 E-value=2.3e+02 Score=29.55 Aligned_cols=29 Identities=34% Similarity=0.583 Sum_probs=21.2
Q ss_pred cchHHHHHHHHHHhCCCCCceEEEEcCCccc
Q 012437 358 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGD 388 (463)
Q Consensus 358 ~~K~~~l~~l~~~~~~~~~~~vIyIGDs~tD 388 (463)
..|...+++|..+.+. ...-|.||||.--
T Consensus 408 iGKescFerI~~RFg~--K~~yvvIgdG~ee 436 (468)
T KOG3107|consen 408 IGKESCFERIQSRFGR--KVVYVVIGDGVEE 436 (468)
T ss_pred ccHHHHHHHHHHHhCC--ceEEEEecCcHHH
Confidence 4688999999998764 3455679998643
No 318
>PRK05157 pyrroloquinoline quinone biosynthesis protein PqqC; Provisional
Probab=20.31 E-value=8.2e+02 Score=23.93 Aligned_cols=113 Identities=12% Similarity=-0.027 Sum_probs=66.8
Q ss_pred cCCCCccc--cc-CCChhHHHHHHHHHHHhcCCCcCcCCCCCCCCccchhhhhHHHHHHHHhHHHHHHHHHHHHHhhccC
Q 012437 3 EWGTDLAK--MA-TVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNA 79 (463)
Q Consensus 3 ~~gi~~~~--~~-~~~~~~~~Y~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~A~~pC~~~Y~~~~~~~~~~~~~ 79 (463)
.+|++.+. .. ...|.|+..++-....+.... ..+++++++. +.-=-.|.+.-.+.+.
T Consensus 105 alGl~re~v~s~~~~lP~tr~aVday~~~~r~~~------------------~~eavas~lt-E~~~P~I~~~ri~gl~- 164 (246)
T PRK05157 105 AVGLDRDYVLSLRGVLPGVRFAVDAYVNFARRAP------------------WLEAVASSLT-ELFAPQIHQERLAGWP- 164 (246)
T ss_pred HcCCCHHHHhccccCChHHHHHHHHHHHHHccCC------------------HHHHHHHHHH-HHhhhHHHHHHHHHHH-
Confidence 57888875 33 367999998887777775322 2577888877 4433344433222221
Q ss_pred CCCcccccccccccCChHHHHHHH-------HHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 012437 80 NEGNHPYTKWIDNYSSESFQASAL-------QNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 142 (463)
Q Consensus 80 ~~~~~~y~~Wi~~y~s~~f~~~~~-------~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~lE~~Fw~~~ 142 (463)
. +..||+.=+=.-|..-.. ...+.+-+.+ .|+++++++.++-...+..=+.|+++-
T Consensus 165 ----~-~Y~~~~~e~l~yF~~h~~~a~~Dvehal~~~l~~~--~t~e~q~~al~al~~k~d~Lw~~LDai 227 (246)
T PRK05157 165 ----E-HYPWIDPEGLAYFRSRLTQAPRDVEHGLAYVLDHA--TTREQQERALEALQFKLDVLWSMLDAL 227 (246)
T ss_pred ----H-HCCCCCHHHHHHHHHHhhccchhHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 235765422222322222 2222222222 366888999999999999999999976
No 319
>PRK00977 exodeoxyribonuclease VII small subunit; Provisional
Probab=20.19 E-value=1.7e+02 Score=23.35 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Q 012437 96 ESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 134 (463)
Q Consensus 96 ~~f~~~~~~~~~~ld~~~~~~~~~~~~~l~~~f~~a~~l 134 (463)
..|.+...+++++++++-.. +-.++...+.|.++++|
T Consensus 10 ~sfEea~~~LEeIv~~LE~~--~l~Lees~~lyeeg~~L 46 (80)
T PRK00977 10 LSFEEALAELEEIVTRLESG--DLPLEESLAAFERGVAL 46 (80)
T ss_pred CCHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHH
Confidence 46999999999999998532 23577888899998876
Done!