Your job contains 1 sequence.
>012439
MVGLIDLNKTKDDENPSSGSLASASGVSSELWHACAGPLISLPKRGSVVVYFPQGHLEHV
SDFSAAASAAYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDG
DEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAK
DLHGVEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQ
VKNGATFPSFCNQHSSTSSVTEVVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHP
FAEGMRFKMRSETEDAAEQRCSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVESNRHNRVS
PWEIEPSGSNILVTSGLRRTRIGLPLWRPEFPVPEGIGVTDFGESLRFQTVLQGQEISPK
SPYGRAPTNNEAHDIAALESLTVFRYQDLFIIGTCTRYRSAVS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012439
(463 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 1405 1.4e-150 3
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 1095 1.6e-113 2
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 870 4.7e-87 1
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 833 3.9e-83 1
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 826 2.2e-82 1
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 822 5.8e-82 1
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 815 3.2e-81 1
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 807 2.2e-80 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 784 6.2e-78 1
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 759 2.7e-75 1
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 754 9.3e-75 1
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 534 3.3e-71 2
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 518 5.3e-69 2
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 669 9.4e-66 1
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 668 1.2e-65 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 667 1.5e-65 1
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 661 6.7e-65 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 661 6.7e-65 1
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 482 6.2e-46 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 438 2.8e-41 1
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 411 2.1e-38 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 192 8.9e-13 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 171 1.5e-10 2
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 167 1.3e-09 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 166 1.3e-09 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 160 7.0e-09 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 158 1.1e-08 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 145 1.1e-07 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 144 2.6e-07 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 146 3.0e-07 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 137 2.9e-06 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 135 1.7e-05 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 127 2.0e-05 1
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 130 5.9e-05 1
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 1405 (499.6 bits), Expect = 1.4e-150, Sum P(3) = 1.4e-150
Identities = 266/396 (67%), Positives = 317/396 (80%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXYDIPPHLFCRVADVKLHAD 89
ELWHACAGPLISLPKRGS+V+YFPQGHLE DF Y +PPH+FCR+ DVKLHA+
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAAI---YGLPPHVFCRILDVKLHAE 110
Query: 90 AASDEVYAQVSLVHD-ELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTST 148
+DEVYAQVSL+ + E IE+KVR+G I DG EE EV +S+TPHMFCKTLTASDTST
Sbjct: 111 TTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTST 170
Query: 149 CGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSA 208
GGFSVPRRAAEDCFPPLDY Q RPSQ+L+A+DLHG+EW+FRHIYRGQPRRHLLTTGWSA
Sbjct: 171 HGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSA 230
Query: 209 FVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSVTEVVDAIA 268
FVNKKKLVSGDAVLFLRG+DG+L++G+RRA+Q++ A + NQ+ + ++ +EV AI+
Sbjct: 231 FVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAHAIS 290
Query: 269 RKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCSGLIVGV 328
FSISYNP+AS S F+IP KFLK +D+PF GMRFK R E+EDA+E+R G+I G+
Sbjct: 291 THSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGIISGI 350
Query: 329 SDMDPVRWPGSKWRCLLVRWDDVESNRHN-RVSPWEIEPSGS----NILVTSGLRRTRIG 383
SD+DP+RWPGSKWRCLLVRWDD+ +N H RVSPWEIEPSGS VT+G +R+RIG
Sbjct: 351 SDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIG 410
Query: 384 LPLWRPEFPVPEGIGVTDFGESLRFQTVLQGQEISP 419
+P+ PV EGI TDF ESLRFQ VLQGQEI P
Sbjct: 411 FSSGKPDIPVSEGIRATDFEESLRFQRVLQGQEIFP 446
Score = 60 (26.2 bits), Expect = 1.4e-150, Sum P(3) = 1.4e-150
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 400 TDFGESLRFQTVLQGQEISP 419
T+FG+S F VLQGQE P
Sbjct: 467 TEFGDSYGFHKVLQGQETVP 486
Score = 41 (19.5 bits), Expect = 1.4e-150, Sum P(3) = 1.4e-150
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 1 MVGLIDLN--KTKDDE 14
M GLIDLN +T++DE
Sbjct: 1 MGGLIDLNVMETEEDE 16
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 1095 (390.5 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 226/405 (55%), Positives = 284/405 (70%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEH---VSDFXXXXXXXYDIPPHLFCRVADVKL 86
ELWHACAGPL LPK+G+VVVYFPQGHLE VS +D+ P + CRV +V+L
Sbjct: 65 ELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLEIPKFDLNPQIVCRVVNVQL 124
Query: 87 HADAASDEVYAQVSLVHDELIEQKVRKGK-IKE-DGDEESVEVAAKSSTPHMFCKTLTAS 144
A+ +DEVY QV+L+ + +GK +KE G+EE ++ TPHMFCKTLTAS
Sbjct: 125 LANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTAS 184
Query: 145 DTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTT 204
DTST GGFSVPRRAAEDCF PLDY QQRPSQ+L+AKDLHGVEWKFRHIYRGQPRRHLLTT
Sbjct: 185 DTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTT 244
Query: 205 GWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSVTEVV 264
GWS FV++K LVSGDAVLFLR E GEL++GIRRAA+ +NG S ++S ++ ++ V
Sbjct: 245 GWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLP-DSIIEKNSCSNILSLVA 303
Query: 265 DAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCSGL 324
+A++ K F + Y+PRA+ +EFVIP K++ S+ P G RF+MR E +D+ E+RC+G+
Sbjct: 304 NAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPERRCAGV 363
Query: 325 IVGVSDMDPVRWPGSKWRCLLVRWDD-VESNRHNRVSPWEIEPSGS--NILVTSGLRRTR 381
+ GV D+DP RWP SKWRCLLVRWD+ S+ RVSPWEI+PS S ++ + S R R
Sbjct: 364 VTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKR 423
Query: 382 --IGL-PLWRPEFPVPEGIGVTDFGESLRFQTVLQGQE-ISPKSP 422
GL P P+ + G DF ES+R VLQGQE I SP
Sbjct: 424 PWAGLLDTTPPGNPITKRGGFLDFEESVRPSKVLQGQENIGSASP 468
Score = 45 (20.9 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 394 PEGIGVTDFGESLRFQTVLQGQEI-SPKS 421
P GV D RF VLQGQEI S KS
Sbjct: 512 PACSGVMDLD---RFPRVLQGQEICSLKS 537
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 174/349 (49%), Positives = 233/349 (66%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXX----YDIPPHLFCRVADVK 85
ELWHACAGPL+++P++ V YFPQGH+E V YD+P L CRV +V
Sbjct: 61 ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVD 120
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTP-----HMFCKT 140
L A+A +DEVYAQ++L+ + + DE ++E A P H FCKT
Sbjct: 121 LKAEADTDEVYAQITLLPEA-------------NQDENAIEKEAPLPPPPRFQVHSFCKT 167
Query: 141 LTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRH 200
LTASDTST GGFSV RR A++C PPLD +Q P+Q+LVAKDLH EW+FRHI+RGQPRRH
Sbjct: 168 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRH 227
Query: 201 LLTTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSV 260
LL +GWS FV+ K+LV+GDA +FLRGE+GEL++G+RRA + + G S + HS V
Sbjct: 228 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR-QQGNVPSSVISSHSMHLGV 286
Query: 261 TEVV-DAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQ 319
AI+ F++ Y PR S SEF++P +++++S+ + ++ GMRFKMR E E+A EQ
Sbjct: 287 LATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQ 346
Query: 320 RCSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIEPS 367
R +G IVG+ + DP RWP SKWR L VRWD+ S R +RVSPW++EP+
Sbjct: 347 RFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPA 395
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 179/385 (46%), Positives = 238/385 (61%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXY-----DIPPHLFCRVADV 84
ELWHACAGPL+SLP GS VVYFPQGH E V+ + +PP L C++ +V
Sbjct: 22 ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 81
Query: 85 KLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTP-HMFCKTLTA 143
+HAD +DEVYAQ++L Q + + KE +E+ S P + FCKTLTA
Sbjct: 82 TMHADVETDEVYAQMTL-------QPLTPEEQKETF--VPIELGIPSKQPSNYFCKTLTA 132
Query: 144 SDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLT 203
SDTST GGFSVPRRAAE FPPLDY Q P+Q+L+A+DLH VEWKFRHI+RGQP+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 192
Query: 204 TGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSVTEV 263
TGWS FV+ K+LV+GD+V+F+R E +L +GIR A + + + +
Sbjct: 193 TGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAA 252
Query: 264 VDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHP-FAEGMRFKMRSETEDAAEQRCS 322
A A F++ ++PRAS SEFVI ++K++K++ H + GMRF+M ETE+++ +R
Sbjct: 253 AHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYM 312
Query: 323 GLIVGVSDMDPVRWPGSKWRCLLVRWDD-VESNRHNRVSPWEIEPSGSNILVTSGLRRTR 381
G I G+SD+D VRWP S WR + V WD+ R RVS WEIEP + + S L R
Sbjct: 313 GTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-LFPLR 371
Query: 382 IGLPLWRPEFPVPEGIGVTDFGESL 406
+ P +P+G G D G L
Sbjct: 372 LKRPWHAGTSSLPDGRG--DLGSGL 394
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 180/385 (46%), Positives = 236/385 (61%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXYDIP------PHLFCRVAD 83
ELWHACAGPL+SLP GS VVYFPQGH E V+ + IP P L C++ +
Sbjct: 25 ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAH-IPNYPSLHPQLICQLHN 83
Query: 84 VKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTA 143
V +HAD +DEVYAQ++L Q + + K+ + V ++ T + FCKTLTA
Sbjct: 84 VTMHADVETDEVYAQMTL-------QPLNAQEQKDPYLPAELGVPSRQPTNY-FCKTLTA 135
Query: 144 SDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLT 203
SDTST GGFSVPRRAAE FPPLDY QQ P+Q+L+A+DLH EWKFRHI+RGQP+RHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 195
Query: 204 TGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSVTEV 263
TGWS FV+ K+LV+GD+VLF+ + +L +GIRRA + + + +
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 255
Query: 264 VDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHP-FAEGMRFKMRSETEDAAEQRCS 322
A A F+I YNPRAS SEFVIP+ K++K++ H + GMRF+M ETE+++ +R
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315
Query: 323 GLIVGVSDMDPVRWPGSKWRCLLVRWDD-VESNRHNRVSPWEIEPSGSNILVTSGLRRTR 381
G I G+ D+DP RW S WR + V WD+ R RVS WEIEP + + S R
Sbjct: 316 GTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP-LR 374
Query: 382 IGLPLWRPEFPVPEGIGVTDFGESL 406
+ P W P P G+ D G S+
Sbjct: 375 LKRP-WPPGLPSFHGLKEDDMGMSM 398
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 179/363 (49%), Positives = 225/363 (61%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXX----Y-DIPPHLFCRVADV 84
ELWHACAGPL+ LP+ GS+V YF QGH E V+ Y ++P L C+V +V
Sbjct: 54 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 113
Query: 85 KLHADAASDEVYAQVSL--VHDELIEQKVRK-GKIKEDGDEESVEVAAKSSTPHMFCKTL 141
LHAD SDE+YAQ+SL VH E V G ++ G + E FCKTL
Sbjct: 114 TLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLR--GSKHPTE---------FFCKTL 162
Query: 142 TASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHL 201
TASDTST GGFSVPRRAAE FPPLDY Q P+Q+LV +DLH W FRHIYRGQP+RHL
Sbjct: 163 TASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHL 222
Query: 202 LTTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSVT 261
LTTGWS FV K+L +GD+VLF+R E +L +G+RRA + + +
Sbjct: 223 LTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLA 282
Query: 262 EVVDAIARKRAFSISYNPRASASEFVIPVNKFLKSL-DHPFAEGMRFKMRSETEDAAEQR 320
A A + F I YNPRA +EFVIP+ K+ K++ + GMRF M ETED+ ++R
Sbjct: 283 AAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRR 342
Query: 321 CSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVESN-RHNRVSPWEIEPSGSNIL---VTSG 376
G IVG+SD+DP+RWPGSKWR L V WD+ N + RVSPW+IE S + +TSG
Sbjct: 343 YMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTSG 402
Query: 377 LRR 379
L+R
Sbjct: 403 LKR 405
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 173/373 (46%), Positives = 228/373 (61%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXX---Y-DIPPHLFCRVADVK 85
+LWHACAGPL+SLP GS+VVYFPQGH E V+ Y ++P L C + V
Sbjct: 23 QLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLHSVT 82
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
LHAD +DEVYAQ++L + + + R+ + D + + FCKTLTASD
Sbjct: 83 LHADTETDEVYAQMTL---QPVNKYDREALLASD-----MGLKLNRQPTEFFCKTLTASD 134
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
TST GGFSVPRRAAE FPPLD+ Q P+Q++VAKDLH W FRHIYRGQP+RHLLTTG
Sbjct: 135 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTG 194
Query: 206 WSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSVTEVVD 265
WS FV+ K+L +GD+VLF+R E +L +GIRRA + + + +
Sbjct: 195 WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAH 254
Query: 266 AIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCSGLI 325
A A F+I +NPRAS SEFV+P+ K+ K+L + GMRF+M ETED +R G +
Sbjct: 255 ANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTV 314
Query: 326 VGVSDMDPVRWPGSKWRCLLVRWDD-VESNRHNRVSPWEIEPSGSNILVTSGLRRTRIGL 384
G+SD+DPVRW GS+WR L V WD+ +R +RVS WEIEP + +
Sbjct: 315 TGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPP-------- 366
Query: 385 PLWRPEFPVPEGI 397
P +RP++P G+
Sbjct: 367 PFFRPKYPRQPGM 379
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 167/348 (47%), Positives = 221/348 (63%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXX----XYDIPPHLFCRVADVK 85
ELWHACAGPL++LP+ G V YFP+GH+E + +++P + C+V +++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
A+ +DEVYAQ++L+ + ++Q + + V+ K T H FCKTLTASD
Sbjct: 82 RRAEPETDEVYAQITLLPE--LDQS------EPTSPDAPVQEPEKC-TVHSFCKTLTASD 132
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
TST GGFSV RR A+DC PPLD QQ P Q+LVA DLH EW FRHI+RGQPRRHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTG 192
Query: 206 WSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPS-FCNQHSSTSSV-TEV 263
WS FV+ KKLV+GDA +FLRGE+ EL++G+RR ++ PS + HS V
Sbjct: 193 WSVFVSSKKLVAGDAFIFLRGENEELRVGVRR--HMRQQTNIPSSVISSHSMHIGVLATA 250
Query: 264 VDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCSG 323
AI FS+ Y PR S SEF++ VN++L++ + GMRFKMR E E+A E+R SG
Sbjct: 251 AHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSG 310
Query: 324 LIVGVSDMDPVRWPGSKWRCLLVRWDDVESN-RHNRVSPWEIEPSGSN 370
IVGV + W S+WR L V+WD+ S R RVSPWE+EP +N
Sbjct: 311 TIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVAN 358
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 160/344 (46%), Positives = 216/344 (62%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXX-----YDIPPHLFCRVADV 84
ELW CAGPL+ +P+ V YFPQGH+E + + +PP + C V +V
Sbjct: 12 ELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNV 71
Query: 85 KLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTAS 144
L A+ +DEVYAQ++L+ + +V + + E + H F K LTAS
Sbjct: 72 SLQAEKDTDEVYAQITLIP---VGTEVDEPMSPDPSPPE-----LQRPKVHSFSKVLTAS 123
Query: 145 DTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTT 204
DTST GGFSV R+ A +C PPLD QQ P+Q+LVA+D+HG +WKF+HI+RGQPRRHLLTT
Sbjct: 124 DTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTT 183
Query: 205 GWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSVTEVV 264
GWS FV K+LV+GD +FLRGE+GEL++G+RRA ++ + S + HS V
Sbjct: 184 GWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRA-NLQQSSMPSSVISSHSMHLGVLATA 242
Query: 265 -DAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCSG 323
A K F + Y PR S +F+I +NK+L+++ + F+ GMRFKMR E ED+ E+R SG
Sbjct: 243 RHATQTKTMFIVYYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSG 300
Query: 324 LIVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIEP 366
++GV D P W SKWRCL V WD+ S +R N+VSPWEIEP
Sbjct: 301 TVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEP 343
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 161/351 (45%), Positives = 217/351 (61%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHV-----SDFXXXXXXXYDIPPHLFCRVADV 84
ELW ACAGPL+ +P+ G V YFPQGH+E + +++PP + CRV V
Sbjct: 42 ELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSV 101
Query: 85 KLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTAS 144
L A+ +DEVYAQ++L +E +Q D VE A T F K LTAS
Sbjct: 102 TLKAEHETDEVYAQITLQPEE--DQSEPTSL-----DPPLVEPA--KPTVDSFVKILTAS 152
Query: 145 DTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTT 204
DTST GGFSV R+ A +C P LD Q P+Q+LVA+DLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 153 DTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTT 212
Query: 205 GWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFP-SFCNQHSSTSSVTEV 263
GWS FV K+LV+GDA +FLRGE G+L++G+RR A K +T P S + S V
Sbjct: 213 GWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLA--KQQSTMPASVISSQSMRLGVLAT 270
Query: 264 VD-AIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCS 322
A+ F + Y PR S +F+I VNK++ ++ + F+ GMR++MR E E++ E+ +
Sbjct: 271 ASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFT 328
Query: 323 GLIVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIEPSGSNIL 372
G I+G D+ +WP SKWR L ++WD+ S R N+VSPWEIEP + L
Sbjct: 329 GTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSAL 378
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 156/363 (42%), Positives = 218/363 (60%)
Query: 12 DDENPXXXXXXXXXXXXXELWHACAGPLISLPKRGSVVVYFPQGHLEHV-----SDFXXX 66
DD+ ELW CAGPL+ +P+ V YFPQGH+E +
Sbjct: 7 DDDFGSSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSE 66
Query: 67 XXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVE 126
+D+PP + CRV DV L A+ +DEVYAQ++L +E +Q E +
Sbjct: 67 EIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEE--DQS-------EPTSLDPPI 117
Query: 127 VAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVE 186
V H F K LTASDTST GGFSV R+ A +C P LD Q P+Q+LV +DLHG E
Sbjct: 118 VGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFE 177
Query: 187 WKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGAT 246
W+F+HI+RGQPRRHLLTTGWS FV+ K+LV+GDA +FLRGE+G+L++G+RR A ++ +T
Sbjct: 178 WRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLA--RHQST 235
Query: 247 FPS--FCNQHSSTSSVTEVVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEG 304
P+ +Q + A+ F + Y PR S +F++ VNK+++++ H F+ G
Sbjct: 236 MPTSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRIS--QFIVGVNKYMEAIKHGFSLG 293
Query: 305 MRFKMRSETEDAAEQRCSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWE 363
RF+MR E E++ E+ +G IVG D+ +WP SKWR L V+WD+ + R ++VSPWE
Sbjct: 294 TRFRMRFEGEESPERIFTGTIVGSGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWE 352
Query: 364 IEP 366
IEP
Sbjct: 353 IEP 355
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 534 (193.0 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 112/228 (49%), Positives = 147/228 (64%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXYDIPPHLFCRVADVKLHAD 89
+LWHACAG ++ +P S V YFPQGH E+ D IPP + CRV +K AD
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDFGNL--PIPPMVLCRVLAIKYMAD 76
Query: 90 AASDEVYAQVSLV---HDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDT 146
A SDEV+A++ L+ DE ++ + G+ +G E + E TP F KTLT SD
Sbjct: 77 AESDEVFAKLRLIPLKDDEYVDHEYGDGE-DSNGFESNSE-----KTPS-FAKTLTQSDA 129
Query: 147 STCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTGW 206
+ GGFSVPR AE FP LDY + P Q ++AKD+HG WKFRHIYRG PRRHLLTTGW
Sbjct: 130 NNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGW 189
Query: 207 SAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQ--VKNGATFPSFCN 252
S FVN+KKLV+GD+++F+R E+G+L +GIRRA + + NG + + N
Sbjct: 190 SNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWN 237
Score = 205 (77.2 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 60/198 (30%), Positives = 90/198 (45%)
Query: 256 STSSVTEVVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETED 315
+ SV E R F + Y PRAS SEF + ++ P+ GMRFKM ETED
Sbjct: 272 TAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETED 331
Query: 316 AAE-QRCSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVESNRH-NRVSPWEIEPSGSNI-- 371
++ G + V+ DP+RWP S WR L V WD+ + ++ RV+PW +E SN+
Sbjct: 332 SSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELV-SNVHP 390
Query: 372 --LVTSGLRRTRIGLPLWRPEFP-VPEGIGVTDFGESLRFQTVLQGQEISPKSPYGRAPT 428
L + R ++ LP P++ + I V F + ++ + P G
Sbjct: 391 IPLTSFSPPRKKMRLPQ-HPDYNNLINSIPVPSFPSNPLIRSSPLSSVLD-NVPVGLQGA 448
Query: 429 NNEAHDIAALESLTVFRY 446
+ AH L S + Y
Sbjct: 449 RHNAHQYYGLSSSDLHHY 466
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 518 (187.4 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 107/216 (49%), Positives = 134/216 (62%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVS---DFXXXXXXXYDIPPHLFCRVADVKL 86
+LWHACAG ++ +P S V YF QGH EH DF +PP + CRV VK
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPR-----VPPLILCRVVSVKF 64
Query: 87 HADAASDEVYAQVSLV----HDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLT 142
ADA +DEV+A+++L+ +D +E G D K P F KTLT
Sbjct: 65 LADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNG---NGKEK-PASFAKTLT 120
Query: 143 ASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLL 202
SD + GGFSVPR AE FP LDY + P Q ++AKD+HG WKFRHIYRG PRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 203 TTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRA 238
TTGWS FVN+KKL++GD+++FLR E G+L +GIRRA
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA 216
Score = 200 (75.5 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 52/141 (36%), Positives = 75/141 (53%)
Query: 260 VTEVVDAIARK---RAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDA 316
V V +A+AR +AF + Y PRAS EF + ++ + GMRFKM ETED+
Sbjct: 271 VEAVAEAVARAACGQAFEVVYYPRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDS 330
Query: 317 AE-QRCSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVESNRH-NRVSPWEIEPSGS--NIL 372
+ G + V DP+RWP S WR L V WD+ + ++ RVSPW +E + I
Sbjct: 331 SRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIH 390
Query: 373 VTSGLRRTRIGLPLWRP-EFP 392
++ R +I +P +P EFP
Sbjct: 391 LSPFSPRKKIRIP--QPFEFP 409
Score = 47 (21.6 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 218 GDAVLFLRGEDGELKIGIRRAAQVKN--GATFPSFCNQHSSTSSVTEVVDAIARKRAFSI 275
G+++ +L ++ GI+ A Q + G+ PS + + SS T + + F
Sbjct: 428 GESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSD-LNLSSYTGN-NKLHSPAMFLS 485
Query: 276 SYNPR 280
S+NPR
Sbjct: 486 SFNPR 490
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 152/360 (42%), Positives = 206/360 (57%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXY----DIPPHLFCRVADVK 85
+LW CAGPL +PK G V YFPQGH+E V D P L CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQ 86
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
L + SDE YA+++L+ D Q V I + + + F K LTASD
Sbjct: 87 LKVENNSDETYAEITLMPDTT--QVV----IPTQNQNQFRPLV------NSFTKVLTASD 134
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
TS GGFSVP++ A +C PPLD Q P+Q+++A DLHG +W+FRHIYRG +RHLLT G
Sbjct: 135 TSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIG 194
Query: 206 WSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSV-TEVV 264
W+AF KKLV GD ++F+RGE GEL++GIRRA + G S + S +
Sbjct: 195 WNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGH-QQGNIPSSIVSIESMRHGIIASAK 253
Query: 265 DAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCSGL 324
A + F + Y PR+S +F++ +KFL +++ F G RF MR E +D +E+R G
Sbjct: 254 HAFDNQCMFIVVYKPRSS--QFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGT 311
Query: 325 IVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIE--PSGSNILVTSGLRRTR 381
I+GVSD P W S+WR L V+WD+ S R N+VSPW+IE SN+ +S L+ R
Sbjct: 312 IIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVSRSSFLKNKR 370
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 128/289 (44%), Positives = 172/289 (59%)
Query: 137 FCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQ 196
F K LTASDTS GGFSVP++ A +C PPLD Q P+Q+++A DLHG +W+FRHIYRG
Sbjct: 126 FTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGT 185
Query: 197 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSS 256
+RHLLT GW+AF KKLV GD ++F+RGE GEL++GIRRA + G S + S
Sbjct: 186 AQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGH-QQGNIPSSIVSIESM 244
Query: 257 TSSV-TEVVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETED 315
+ A + F + Y PR+S +F++ +KFL +++ F G RF MR E +D
Sbjct: 245 RHGIIASAKHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDVVNNKFNVGSRFTMRFEGDD 302
Query: 316 AAEQRCSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIE--PSGSNIL 372
+E+R G I+GVSD P W S+WR L V+WD+ S R N+VSPW+IE SN+
Sbjct: 303 FSERRSFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVS 361
Query: 373 VTSGLRRTRIGLPLWRPEFPVPEGIGVTDFGESLRFQTVLQGQEISPKS 421
+S L+ R V E IG + L T+ QGQEI +S
Sbjct: 362 RSSFLKNKR--------SREVNE-IGSSS--SHLLPPTLTQGQEIGQQS 399
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 147/344 (42%), Positives = 201/344 (58%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXY----DIPPHLFCRVADVK 85
+LW CAGPL +PK G V YFPQGH+E V D+P L CRV +
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVIAIH 86
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
L + SDE YA+++L+ D Q V + +E S F K LTASD
Sbjct: 87 LKVENNSDETYAEITLMPDTT--QVVIPTQ-----NENQFRPLVNS-----FTKVLTASD 134
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
TS GGF VP++ A +C P LD Q P+Q+L+A DLHG +W+F H YRG P+RHLLTTG
Sbjct: 135 TSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTG 194
Query: 206 WSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNG--ATFPSF-CNQHSSTSSVTE 262
W+AF KKLV+GD ++F+RGE GEL++GIRRA + ++ S C +H +S
Sbjct: 195 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKH 254
Query: 263 VVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCS 322
D + F++ Y PR+S +F++ +KFL ++++ F G RF MR E +D +E+RC
Sbjct: 255 AFD---NQCMFTVVYKPRSS--KFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCF 309
Query: 323 GLIVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIE 365
G I+GVSD P W S+WR L V+WD+ S +VSPW+IE
Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIE 352
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 147/344 (42%), Positives = 202/344 (58%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXY----DIPPHLFCRVADVK 85
+LW CAGPL +PK G V YFPQG++E V D+P L CRV +
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
L + SDE+YA+++L+ D Q V + E S F K LTASD
Sbjct: 87 LKVENNSDEIYAEITLMPDTT--QVVIPTQ-----SENRFRPLVNS-----FTKVLTASD 134
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
TS GGFSVP++ A +C PPLD Q P+Q+++A DLH +W+FRH YRG P+RH LTTG
Sbjct: 135 TSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTG 194
Query: 206 WSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNG--ATFPSF-CNQHSSTSSVTE 262
W+ F+ KKLV GD ++F+RGE GEL++GIRRA + ++ S C +H +S
Sbjct: 195 WNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 254
Query: 263 VVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCS 322
D + F + Y PR+S +F++ +KFL ++++ F G RF MR E +D +E+R
Sbjct: 255 AFD---NQCIFIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF 309
Query: 323 GLIVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIE 365
G I+GVSD P W S+WR L V+WD+ S +R N+VSPWEIE
Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 352
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 148/342 (43%), Positives = 201/342 (58%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXY----DIPPHLFCRVADVK 85
+LW CAGPL +PK G + YFPQG++E V D+P L CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQ 86
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
L + SDE YA+++L+ D Q V + +E S F K LTASD
Sbjct: 87 LKVENNSDETYAEITLMPDTT--QVVIPTQ-----NENQFRPLVNS-----FTKVLTASD 134
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
TS GGF VP++ A +C PPLD Q P+Q+L+A DLHG +W+F H YRG P+RHLLTTG
Sbjct: 135 TS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTG 192
Query: 206 WSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNGATFPSFCNQHSSTSSV-TEVV 264
W+AF KKLV+GD ++F+RGE GEL++GIRRA + G S + S V
Sbjct: 193 WNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGH-QQGNIPSSIISIESMRHGVIASAK 251
Query: 265 DAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCSGL 324
A + F + Y PR+S +F++ +KFL ++++ F G RF MR E +D +E+R G
Sbjct: 252 HAFDNQCMFIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGT 309
Query: 325 IVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIE 365
I+GVSD P W S+WR L V+WD+ S +R N+VSPWEIE
Sbjct: 310 IIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIE 350
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 149/363 (41%), Positives = 210/363 (57%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXY----DIPPHLFCRVADVK 85
+LW CAGPL +PK G V YFPQG++E V D+P L CRV +
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
L + SDE YA+++L+ D Q V I + + + + F K LTASD
Sbjct: 87 LKVENNSDETYAEITLMPDTT--QVV----IPTQSENQFRPLV------NSFTKVLTASD 134
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
TS GGF VP++ A +C PPL P+Q+L+AKDLHG +W+FRH YRG P+RH LTTG
Sbjct: 135 TSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTG 190
Query: 206 WSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKNG--ATFPSF-CNQHSSTSSVTE 262
W+ F KKLV GD ++F+RGE GEL++GIRRA + ++ S C +H +S
Sbjct: 191 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 250
Query: 263 VVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQRCS 322
+D + F + Y P +S+F++ +KFL ++++ F G RF MR E +D +E+R
Sbjct: 251 ALD---NQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYF 307
Query: 323 GLIVGVSDMDPVRWPGSKWRCLLVRWDDVES-NRHNRVSPWEIEP--SGSNILVTSGLRR 379
G I+GV+D P W S+WR L V+WD+ S +R N+VSPWEIE S N+ +S L+
Sbjct: 308 GTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSSLLKN 366
Query: 380 TRI 382
R+
Sbjct: 367 KRL 369
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 130/389 (33%), Positives = 183/389 (47%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVS----DFXXXXXXXYDIPPHLFCRVADVK 85
+LW+ CAGPL LPK G V YFPQGH+E + D +D+P L CRV +
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVVAID 84
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
D +DEVYAQ+SL+ D +V D V + F K LTASD
Sbjct: 85 RKVDKNTDEVYAQISLMPDTT---EVMTHNTTMDTRRPIV---------YFFSKILTASD 132
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
S GG +P++ A +CFPPLD Q +Q LVAKDL+G EW F+H++RG P+RH+ T+G
Sbjct: 133 VSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSG 192
Query: 206 --WSAFVNKKKLVSGDAVLFLRGEDGELKIGIRRAAQVKN---GATFPSFCNQHSSTSSV 260
WS F K+L+ GD + LRGE+GEL+ GIRRA + + + C QH +SV
Sbjct: 193 GGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASV 252
Query: 261 TEVVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGMRFKMRSETEDAAEQR 320
V+A K F++ Y PR K +G + + +
Sbjct: 253 ---VNAFKTKCMFNVVYKPRMQFEG---------KDFSEKRYDGTIIGVNDMSPHWKDSE 300
Query: 321 CSGLIVGVSDMDPVRWPG--SKWRCL-LVRWDDVESNRHNRVSPW----EIEPSGSNILV 373
L V ++ P P S W L+ D+ + + W EI + SN+
Sbjct: 301 WRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDISQSSLKKKKHWLQLNEIGATLSNLWT 360
Query: 374 TSGLRRTRIGLPLWRPEFPVPEGIGVTDF 402
+ + + P+ PEF P I + F
Sbjct: 361 CQEIGQRSMNSPISVPEFSYPNAIEDSKF 389
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 108/297 (36%), Positives = 156/297 (52%)
Query: 31 LWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXYDIPPHLFCRVADVKLHADA 90
+W ACAG + +P S V YFPQGH+EH P C + ++L AD
Sbjct: 20 IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPVP---CIITSIQLLADP 76
Query: 91 ASDEVYAQVSLVHDELIEQKVRKGKIKEDGD-EESVEVAAKSSTPHMFCKTLTASDTSTC 149
+DEV+A L+ + +Q+ G + V+ K +T F K LT SD +
Sbjct: 77 VTDEVFAH--LILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTT---FAKILTPSDANNG 131
Query: 150 GGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSAF 209
GGFSVPR A+ FP L++ P Q+L D+HG W FRHIYRG PRRHLLTTGWS F
Sbjct: 132 GGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKF 191
Query: 210 VNKKKLVSGDAVLFLRGEDGELKIGIRRA--AQVKNGATF--PSFCNQHSSTSSVTEVVD 265
VN KKL++GD+V+F+R E+ IG+RR + G+++ N + S SSV + D
Sbjct: 192 VNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDD 251
Query: 266 AIARKRAFSISYNPRASASEFVIPVNKFLKSLD-----HPFAEGMRFKMRSETEDAA 317
+ K+ F S N + +A +N+ + L +P A F +R+E +++
Sbjct: 252 G-SPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESS 307
Score = 157 (60.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 51/179 (28%), Positives = 81/179 (45%)
Query: 246 TFPSFCNQHSSTSSVTEVVDAIARKRAFSISYNPRASASEFVIPVNKFLKSLDHPFAEGM 305
TF N + +VT+ ++ ++ F + + P A SEFV+ S+ + G
Sbjct: 257 TFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTPGT 316
Query: 306 RFKMRSETEDAAEQRCSGLIVGVSDMDPVRWPGSKWRCLLVRWDDVESNRH-NRVSPWEI 364
R KM ETED++ IV + + W GS W+ L + WD+ E ++ RV+PW++
Sbjct: 317 RVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQNVKRVNPWQV 376
Query: 365 EPSGSNILVTSGLRRTRIGLPLWRPEFPVPEGIGVT-DFGESLRFQTVLQGQEISPKSP 422
E I + T P R ++P P G ++ D GE L Q+ L SP
Sbjct: 377 E-----IAAHATQLHTPFP-PAKRLKYPQPGGGFLSGDDGEILYPQSGLSSAAAPDPSP 429
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 93/211 (44%), Positives = 121/211 (57%)
Query: 30 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXY----DIPPHLFCRVADVK 85
+LW CAGPL +PK G V YFPQGH+E V D+P L CRV +
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIH 86
Query: 86 LHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASD 145
L + SDE Y +++L+ D Q V I + + + + + F K LTASD
Sbjct: 87 LKVENNSDETYVEITLMPDTT--QVV----IPTENENQFRPIV------NSFTKVLTASD 134
Query: 146 TSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTG 205
TS G FSVP + A +C PPLD Q P+Q+L+A DLHG +W+F+H YR PR TTG
Sbjct: 135 TSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTG 191
Query: 206 WSAFVNKKKLVSGDAVLFLRGEDGELKIGIR 236
W+AF KKLV GD ++F RGE GEL++GIR
Sbjct: 192 WNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 192 (72.6 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 60/173 (34%), Positives = 84/173 (48%)
Query: 99 VSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRA 158
+SL DE +++ K +E+G E VA + HMF K +T SD +P++
Sbjct: 5 LSLTRDE--DEEEAKPLAEEEGARE---VADRE---HMFDKVVTPSDVGKLNRLVIPKQH 56
Query: 159 AEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSG 218
AE FP LD L +DL G W+FR+ Y + +++T GWS FV KKL +G
Sbjct: 57 AERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAG 115
Query: 219 DAVLFLR-----GEDGELKIGIRRAAQVKN------GATFPSFCNQHSSTSSV 260
D V F R G D L I RR +V + GA FP F + S+ S+
Sbjct: 116 DIVSFQRCVGDSGRDSRLFIDWRRRPKVPDHPHFAAGAMFPRFYSFPSTNYSL 168
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 171 (65.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 48/146 (32%), Positives = 71/146 (48%)
Query: 117 KEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQ 176
+ED ++ E ++ HMF K +T SD +P++ AE FP LD S +
Sbjct: 3 QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNK 61
Query: 177 ---LVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELKI 233
L +D G W+FR+ Y + +++T GWS FV KKL +GD V F R + K+
Sbjct: 62 GLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKL 121
Query: 234 GI--RRAAQVKN-------GATFPSF 250
I RR ++ + GA FP F
Sbjct: 122 YIDWRRRPKIPDHHHQQFAGAMFPRF 147
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 422 PYGRAPTNNEAHDI 435
P+ + PTN E H++
Sbjct: 151 PHPQMPTNYETHNL 164
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 135 HMFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYR 194
HMF K +T SD +P++ AE FP LD + L +D +G W+FR+ Y
Sbjct: 54 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYW 112
Query: 195 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRG 226
+ +++T GWS FV +KKL +GD V F RG
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 135 HMFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIYR 194
HMF K LT SD +P++ AE+ FP D + L +D +G W+FR+ Y
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLED---NQNGTVLDFQDKNGKMWRFRYSYW 90
Query: 195 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRG 226
+ +++T GWS FV +KKL +GD V F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 160 (61.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 47/147 (31%), Positives = 69/147 (46%)
Query: 123 ESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFP-PLDYMQQRPSQQLVAKD 181
+ V S +F K +T SD +P+ AE FP P + + L +D
Sbjct: 174 DGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVK-GVLLNFED 232
Query: 182 LHGVEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR--GEDGELKIG--IRR 237
++G W+FR+ Y + ++LT GWS FV +K L +GD V F R G+D +L IG R
Sbjct: 233 VNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRS 292
Query: 238 AAQVKNGATFPSFCNQHSSTSSVTEVV 264
+ + G F S SS +VV
Sbjct: 293 GSDLDAGRVLRLFGVNISPESSRNDVV 319
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 136 MFCKTLTASDTSTCGGFSVPRRAAEDCFP-PLDYMQQRPSQQLVA-KDLHGVEWKFRHIY 193
+F KT+T SD +P+ AE FP PL L+ +D++G W+FR+ Y
Sbjct: 182 LFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSY 241
Query: 194 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGI 235
+ ++LT GWS FV +K+L +GD + F R D + K I
Sbjct: 242 WNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFI 283
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/106 (34%), Positives = 53/106 (50%)
Query: 136 MFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVA--KDLHGVEWKFRHIY 193
+F K LT SD +P++ AE FP + L+ +D G W+FR+ Y
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 194 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR--GEDGELKIGIRR 237
+ ++LT GWS +V +K L +GD VLF R + G IG RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 43/136 (31%), Positives = 61/136 (44%)
Query: 136 MFCKTLTASDTSTCGGFSVPRRAAEDCFP---------PLDYMQQRPSQQLVAKDLHGVE 186
+F K+LT SD +P++ AE FP D L +D G
Sbjct: 45 LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKS 104
Query: 187 WKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLR--GEDGELKIGIRRAAQVKNG 244
W+FR+ Y + ++LT GWS FV K+L GD V F R + L IG RR Q +
Sbjct: 105 WRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQGSSS 164
Query: 245 ATFPSFCNQHSSTSSV 260
+ + N +TSS+
Sbjct: 165 SVAAT--NSAVNTSSM 178
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 146 (56.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 57/186 (30%), Positives = 85/186 (45%)
Query: 104 DELIEQKVRKGKIKEDGDEESVEVAAKSSTPHM------FCKTLTASDTSTCGGFSVPRR 157
DE EQ RK + DG +E A + + F KT+T SD +P++
Sbjct: 158 DEF-EQSRRKF-VNGDGKRSGLETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQ 215
Query: 158 AAEDCFP-PL--DYMQQRPSQQ---LV-AKDLHGVEWKFRHIYRGQPRRHLLTTGWSAFV 210
AE FP P M PS L+ +D G W+FR+ Y + ++LT GWS FV
Sbjct: 216 HAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFV 275
Query: 211 NKKKLVSGDAVLFLR--GEDGELKIGIR-RAAQVKNGATFPSFCNQHSSTSSVTEV-VDA 266
+K L +GD V F R G D +L I + R++ V+ + S +V V+
Sbjct: 276 KEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQTVVRLFGVNIFNVSNEKPNDVAVEC 335
Query: 267 IARKRA 272
+ +KR+
Sbjct: 336 VGKKRS 341
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 136 MFCKTLTASDTSTCGGFSVPRRAAEDCFP-PLDYMQQRPSQQLVAKDLHGVEWKFRHIYR 194
+F K +T SD +P++ AE FP P + +D++G W+FR+ Y
Sbjct: 187 LFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYW 246
Query: 195 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELKIGI 235
+ ++LT GWS FV +K L +GD V F R E ++ I
Sbjct: 247 NSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYI 287
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 43/133 (32%), Positives = 67/133 (50%)
Query: 136 MFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFRHIY-- 193
+F KTL+ASD G +P+ AE FPP+ + P L +D+ G EW F+ Y
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIP---LKIQDVRGREWTFQFRYWP 350
Query: 194 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDG-ELKIGIRRAAQVKN--GATFPSF 250
R ++L G + + L +GD V F R + G +L +G R+AA + G +
Sbjct: 351 NNNSRMYVLE-GVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGDMQGCGLTNG 409
Query: 251 CN-QHSSTSSVTE 262
+ + +S+S VTE
Sbjct: 410 TSTEDTSSSGVTE 422
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/134 (32%), Positives = 61/134 (45%)
Query: 122 EESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVA-- 179
+ V +A + S +F K+LT SD +P++ AE FP + S VA
Sbjct: 17 QNDVAIAQRES---LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATT 73
Query: 180 --------KDLHGVEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGE-D-G 229
+D G WKFR+ Y + ++LT GWS +V K L +GD V F R D
Sbjct: 74 EKGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLH 133
Query: 230 ELKIGIRRAAQVKN 243
L IG RR + +
Sbjct: 134 RLFIGWRRRGEASS 147
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 136 MFCKTLTASDTSTCGGFSVPRRAAEDCFPPLDYMQQRPSQQLVAKDLHGVEWKFR-HIYR 194
+F K L+ASD G +P+ AE FPP+ + P L +D+ G EW F+ +
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLP---LKIQDIKGKEWVFQFRFWP 341
Query: 195 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGE-DGELKIGIRRAA-----QVKNGATFP 248
R + G + + +L +GD V F R E +G+L +G R+A Q+ G++ P
Sbjct: 342 NNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRTEPEGKLVMGYRKATNSTATQMFKGSSEP 401
Query: 249 SFCNQHSST 257
+ N S++
Sbjct: 402 NL-NMFSNS 409
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 463 443 0.00090 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 621 (66 KB)
Total size of DFA: 291 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.52u 0.14s 35.66t Elapsed: 00:00:02
Total cpu time: 35.53u 0.14s 35.67t Elapsed: 00:00:02
Start: Fri May 10 13:36:57 2013 End: Fri May 10 13:36:59 2013