Query 012440
Match_columns 463
No_of_seqs 129 out of 1208
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 09:30:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 1.4E-80 4.9E-85 637.1 41.3 420 5-456 6-438 (439)
2 2e1v_A Acyl transferase; BAHD 100.0 1.5E-77 5E-82 617.8 40.0 441 1-460 1-452 (454)
3 2xr7_A Malonyltransferase; xen 100.0 8.9E-78 3E-82 619.5 37.1 441 7-461 2-453 (453)
4 2bgh_A Vinorine synthase; VS, 100.0 5.9E-74 2E-78 585.0 38.5 411 5-459 3-416 (421)
5 2rkv_A Trichothecene 3-O-acety 100.0 1.1E-62 3.7E-67 507.0 33.4 405 26-458 4-447 (451)
6 1q9j_A PAPA5, polyketide synth 99.2 6.6E-08 2.3E-12 97.2 33.9 294 23-365 4-314 (422)
7 1l5a_A Amide synthase, VIBH; n 98.7 3.1E-05 1.1E-09 78.0 32.2 346 61-461 34-404 (436)
8 2jgp_A Tyrocidine synthetase 3 98.7 7.9E-06 2.7E-10 84.5 27.8 260 61-365 132-401 (520)
9 4hvm_A Tlmii; PSI-biology, mid 98.6 8.5E-06 2.9E-10 83.7 23.2 296 24-365 11-328 (493)
10 2xhg_A Tyrocidine synthetase A 98.5 4.8E-05 1.6E-09 77.3 27.3 299 24-366 15-337 (466)
11 2vsq_A Surfactin synthetase su 98.1 0.00037 1.3E-08 80.2 23.9 266 61-365 48-328 (1304)
12 3fot_A 15-O-acetyltransferase; 97.9 0.0016 5.3E-08 67.1 22.8 370 59-458 72-514 (519)
13 3cla_A Type III chloramphenico 75.5 1.8 6.1E-05 38.6 3.3 45 143-187 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 74.3 2 6.8E-05 38.4 3.3 44 143-186 171-216 (217)
15 1q23_A Chloramphenicol acetylt 74.0 2 7E-05 38.4 3.3 44 144-187 168-213 (219)
16 3rqc_A Probable lipoamide acyl 70.0 2.4 8.3E-05 38.1 2.8 30 159-188 187-216 (224)
17 1dpb_A Dihydrolipoyl-transacet 69.9 2.8 9.7E-05 38.1 3.3 29 159-187 208-236 (243)
18 1scz_A E2, dihydrolipoamide su 69.8 2.9 9.8E-05 37.8 3.3 30 159-188 196-225 (233)
19 3b8k_A PDCE2;, dihydrolipoylly 69.0 2.6 8.9E-05 38.3 2.8 29 159-187 204-232 (239)
20 2ii3_A Lipoamide acyltransfera 68.4 3.2 0.00011 38.3 3.3 29 159-187 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 62.9 4.7 0.00016 37.0 3.3 30 159-188 210-239 (256)
22 3l60_A Branched-chain alpha-ke 61.6 5.1 0.00018 36.6 3.3 30 159-188 205-234 (250)
23 2xl1_A Arginine attenuator pep 59.3 8.1 0.00028 20.7 2.4 19 274-292 5-23 (26)
24 2kl8_A OR15; structural genomi 56.6 11 0.00037 26.0 3.4 36 59-94 9-47 (85)
25 3dva_I Dihydrolipoyllysine-res 43.4 5 0.00017 39.8 0.0 29 159-187 391-419 (428)
26 1x93_A Hypothetical protein HP 33.0 1E+02 0.0034 20.0 5.6 24 245-268 2-25 (55)
27 4hhu_A OR280; engineered prote 27.8 30 0.001 27.1 2.1 35 60-94 92-129 (170)
28 4hhu_A OR280; engineered prote 22.5 32 0.0011 26.9 1.3 33 61-93 12-47 (170)
29 2xt6_A 2-oxoglutarate decarbox 21.3 51 0.0017 36.8 3.2 30 159-188 192-221 (1113)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=1.4e-80 Score=637.09 Aligned_cols=420 Identities=20% Similarity=0.292 Sum_probs=347.3
Q ss_pred cceEEEEeEEEeCCCCCCCCceeecccccccccccCccceEEEecCCCCCCcchhchhHHHHHHHHHhhhhccCcceEee
Q 012440 5 YTVQVVDESHIAPPPGSVPPTVIPLTFLDVSWLFCCPIERILFYELPFPTRHLMQNIIPHLKHSLSLTLHHFFPLAGNLA 84 (463)
Q Consensus 5 ~~v~v~~~~~v~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~ 84 (463)
|+|++.++++|+|+.|+ +.+.++||+||+++... |++.+|||+.+.... ...+++||+||+++|++||||||||+
T Consensus 6 ~~V~i~~~~~V~P~~~t-p~~~~~LS~lD~~~~~~-~~~~~~~y~~~~~~~---~~~~~~Lk~sLs~~L~~f~plAGRl~ 80 (439)
T 4g22_A 6 MKIEVKESTMVRPAQET-PGRNLWNSNVDLVVPNF-HTPSVYFYRPTGSSN---FFDAKVLKDALSRALVPFYPMAGRLK 80 (439)
T ss_dssp CCEEEEEEEEECCSSCC-CCCEECCCHHHHSCCTT-CCCEEEEECCCSCTT---TTCHHHHHHHHHHHTTTTGGGGCEEE
T ss_pred eEEEEeeeEEEeCCCCC-CCCeecCChhHhCcccc-ceeeEEEEcCCCCcc---ccHHHHHHHHHHHHHhhccccceeee
Confidence 88999999999999998 57899999999986554 999999999754321 24689999999999999999999999
Q ss_pred eCC--CCeEEeeCCCceEEEEEecCCCccccccCccccccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEEeCCCcEEEE
Q 012440 85 CNS--KPFIQFNEGDSVRVTVTESDADFGHLVANHLRDNRAFKPLVPKLPFPFPSVSSDNKTPVMAIQVTVFPNSGISIG 162 (463)
Q Consensus 85 ~~~--~~~i~~~~~~gv~~~~~~~~~~~~~l~~~~~~~~~~~~~l~P~~~~~~~~~~~~~~~P~l~vqvt~~~~GG~~l~ 162 (463)
.++ +++|+|+ ++||.|+++++|++++|+.. . .+...++.|+|..+... +..+.|++.||||+|+|||++||
T Consensus 81 ~~~~g~~~i~c~-~~Gv~fv~A~~d~~l~~l~~-~-~p~~~~~~l~p~~~~~~----~~~~~pll~vQvT~f~cGG~~lg 153 (439)
T 4g22_A 81 RDEDGRIEIECN-GEGVLFVEAESDGVVDDFGD-F-APTLELRRLIPAVDYSQ----GISSYALLVLQVTYFKCGGVSLG 153 (439)
T ss_dssp ECTTSCEEEECC-CCCEEEEEEEESSCGGGGTT-C-CCCGGGGGGSCCCCTTS----CTTSSCSEEEEEEECTTSCEEEE
T ss_pred eCCCCCEEEEEC-CCCCEEEEEEcCCcHHHhcC-C-CCCHHHHhcCCCCCccc----ccccCceeEEEEEEecCCCEEEE
Confidence 864 8999997 89999999999999999943 2 24446677888765432 23568999999999999999999
Q ss_pred EeeecccccccchHHHHHHHHHHhccCCCCCCCCCCCCCccCCcccc--CCCCchhhhhhhhhhccCCCCCCCCCCCCcC
Q 012440 163 VTFIHVAADGSSFNHFMKSWASIHKSVTVSETLPPLSLPCHDRNVIK--DPNGLLLSIYLKDWRSVHNSDATAPAIDENV 240 (463)
Q Consensus 163 ~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~P~~dr~~l~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (463)
+++||.++||.|+.+|+++||++||| .. . ...|++||+.+. +|+.. ... +.+|...+...... .+....
T Consensus 154 ~~~~H~v~Dg~~~~~Fl~~wa~~~rg-~~---~--~~~P~~dr~~l~~~~pp~~-~~~-~~~~~~~~~~~~~~-~~~~~~ 224 (439)
T 4g22_A 154 VGMRHHAADGFSGLHFINSWSDMARG-LD---V--TLPPFIDRTLLRARDPPQP-QFQ-HIEYQPPPALAVSP-QTAASD 224 (439)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHHHTT-CC---C--SSCCBCCGGGGCCCSSCCC-SSC-CGGGSCCC-------------
T ss_pred EEeeeccCcHHHHHHHHHHHHHHhCC-CC---C--CCCCccccccccCCCCCCC-CcC-cccccCCCCCcccc-cccccC
Confidence 99999999999999999999999998 33 1 357899999876 33332 111 12333221000000 000011
Q ss_pred C-CCceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHHHHHHHHHHhhccccccCCCCceEEEEEEeccccc
Q 012440 241 Q-VDNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSALMWVYMIELQESESEITDGDMIYHFVPVADCRER 319 (463)
Q Consensus 241 ~-~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~~~rAr~~~~~~~~~~~~~~l~~~vd~R~r 319 (463)
+ .+.++++|+|++++|++||+.+.+... ..++|++|+|+||+|+|++|||.+. +++.+.+.++||+|+|
T Consensus 225 ~~~~~~~~~f~fs~~~i~~LK~~a~~~~~-----~~~~St~dal~A~iWr~~~rAr~~~-----~~~~~~l~~~vd~R~r 294 (439)
T 4g22_A 225 SVPETAVSIFKLTREQISALKAKSKEDGN-----TISYSSYEMLAGHVWRCACKARGLE-----VDQGTKLYIATDGRAR 294 (439)
T ss_dssp ---CEEEEEEEECHHHHHHHHHGGGGGGC-----CCCCCHHHHHHHHHHHHHHHHTTCC-----TTCEEEEEEEEECTTT
T ss_pred CcccceEEEEEECHHHHHHHHHHhhccCC-----CCCccHHHHHHHHHHHHHHHhcCCC-----CCCcEEEEEEEcccCC
Confidence 2 468999999999999999999986542 2679999999999999999999876 7889999999999999
Q ss_pred cCCCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhhhhhhhhhHHHHHHhhHhh-------c-cCCcEEE
Q 012440 320 FEFPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGELEKGALVGAEKWTSNLNEV-------V-KTGRVLA 391 (463)
Q Consensus 320 l~pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~ 391 (463)
++||+|++||||++.++.+.++++||.+ ++|+++|..||+++++++++++++.++|++..++. . .....+.
T Consensus 295 l~Pplp~~Y~GN~v~~~~~~~~~~el~~-~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (439)
T 4g22_A 295 LRPSLPPGYFGNVIFTATPIAIAGDLEF-KPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLG 373 (439)
T ss_dssp SSSCCCTTBCSCCEEEECCEEEHHHHHH-SCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEE
T ss_pred CCCCCCCCcccceeehhhcceEHHHHhh-CcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEE
Confidence 9999999999999999999999999987 89999999999999999999999999999865322 1 1256899
Q ss_pred EeccCCCccccccccCCccceeEEeeecCCceEEEeecCCCCCcEEEEEEeCHHHHHHHHHHHHH
Q 012440 392 VGGSPKFGVYETDFGWGRPKKLEFVHFGAYGSFSLAESRDEEGAIEIGLVIGRDKLDLLNVVFQR 456 (463)
Q Consensus 392 ~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~i~p~~~~~g~~ev~v~L~~~~m~~l~~~~~~ 456 (463)
+|||.++++|++|||||+|+++++...+.+|.++++|+++++||++|.|+|++++|++|+++|++
T Consensus 374 vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 374 ITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp EEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHHHTC
T ss_pred EeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHHhcc
Confidence 99999999999999999999999876667899999999878899999999999999999999864
No 2
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.5e-77 Score=617.84 Aligned_cols=441 Identities=36% Similarity=0.589 Sum_probs=342.8
Q ss_pred CCCCcceEEEEeEEEeCCCCCCCCceeecccccccccccCccceEEEecCCCCCCcchhchhHHHHHHHHHhhhhccCcc
Q 012440 1 MAQQYTVQVVDESHIAPPPGSVPPTVIPLTFLDVSWLFCCPIERILFYELPFPTRHLMQNIIPHLKHSLSLTLHHFFPLA 80 (463)
Q Consensus 1 ~~~~~~v~v~~~~~v~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 80 (463)
||...+|+|.++++|+|+.|+++.+.++||.||+++.+.+|++.+|||+.+...++|.+.++++||+||+++|++|||||
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plA 80 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFV 80 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGG
T ss_pred CCCCceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccc
Confidence 78778899999999999987656899999999998666669999999997543222345679999999999999999999
Q ss_pred eEee-eC-C--CCeEEeeCCCceEEEEEecCCCccccccCccccccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEEeCC
Q 012440 81 GNLA-CN-S--KPFIQFNEGDSVRVTVTESDADFGHLVANHLRDNRAFKPLVPKLPFPFPSVSSDNKTPVMAIQVTVFPN 156 (463)
Q Consensus 81 Grl~-~~-~--~~~i~~~~~~gv~~~~~~~~~~~~~l~~~~~~~~~~~~~l~P~~~~~~~~~~~~~~~P~l~vqvt~~~~ 156 (463)
|||+ .+ + +++|+|++++||.|++++++.+++++.++.+.+...++.|+|..+...+ ..+..+.|++.+|||+|+|
T Consensus 81 GRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~-~~~~~~~pll~vQvT~f~c 159 (454)
T 2e1v_A 81 GKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTR-LSDCIKIPLFSVQVTLFPN 159 (454)
T ss_dssp SEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEE-CSSCEEEECEEEEEEEETT
T ss_pred eeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCccc-ccccccCceEEEEEEEecC
Confidence 9998 54 3 8999998568999999999999999865443344456778887543210 0011345999999999999
Q ss_pred CcEEEEEeeecccccccchHHHHHHHHHHhc-cCCCCCCCCCCCCCccCCccccCCCCchhhhhhhhhhccCCCCCCCC-
Q 012440 157 SGISIGVTFIHVAADGSSFNHFMKSWASIHK-SVTVSETLPPLSLPCHDRNVIKDPNGLLLSIYLKDWRSVHNSDATAP- 234 (463)
Q Consensus 157 GG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~- 234 (463)
||++||+++||.++||.|+.+|+++||++|| |.......++...|++|| .+.+|. + ...+...+...... ..+
T Consensus 160 gG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~-~-~~~~~~~~~~~~~~--~~~~ 234 (454)
T 2e1v_A 160 QGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPM-L-DEAYLKRAKVESFN--EDYV 234 (454)
T ss_dssp TEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHH-H-HHHHHHHTTCTTHH--HHCC
T ss_pred CcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCC-c-chHHHHhhhccccc--cccC
Confidence 9999999999999999999999999999999 632000011134689999 776544 3 32332222110000 000
Q ss_pred CCCCcCCCCceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHHHHHHHHHHhhccccccCCCCceEEEEEEe
Q 012440 235 AIDENVQVDNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSALMWVYMIELQESESEITDGDMIYHFVPVA 314 (463)
Q Consensus 235 ~~~~~~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~~~rAr~~~~~~~~~~~~~~l~~~v 314 (463)
.+....+.+.++++|+|++++|++||+.+.+.... ..++|++|+|+||+|+|+++|| . ++.+.+.++|
T Consensus 235 ~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~----~~~~St~d~l~A~lWr~~~~Ar--~------~~~~~l~~~v 302 (454)
T 2e1v_A 235 TQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPT----LEYVSSFTVACAYIWSCIAKSR--N------DKLQLFGFPI 302 (454)
T ss_dssp CCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTT----CSCCCHHHHHHHHHHHHHHHHH--C------CSEEEEEEEE
T ss_pred cccCCCCCCceEEEEEECHHHHHHHHHHHhhcCCC----CCcccHHHHHHHHHHHHHhhhc--C------CCceEEEEEe
Confidence 00001234677999999999999999999875431 2579999999999999999999 3 4789999999
Q ss_pred ccccccCCCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhhh----hhhhhh-HHHHHHhhHhhccCCcE
Q 012440 315 DCRERFEFPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGELE----KGALVG-AEKWTSNLNEVVKTGRV 389 (463)
Q Consensus 315 d~R~rl~pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~~----~~~~~~-~~~~~~~~~~~~~~~~~ 389 (463)
|+|+|++||+|++|+||++..+.+.++++||.++++|+++|..||+++.+++ ++++++ +.+|++..+.+. ....
T Consensus 303 d~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 381 (454)
T 2e1v_A 303 DRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGM-PTTM 381 (454)
T ss_dssp ECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHCC-CSEE
T ss_pred cchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhc-CCce
Confidence 9999999999999999999999999999999843799999999999999996 566777 778877644332 3458
Q ss_pred EEEeccCCCccccccccCCccceeEEeeecCCceEEEeecCCCCCcEEEEEEeCHHHHHHHHHHHHHHhhh
Q 012440 390 LAVGGSPKFGVYETDFGWGRPKKLEFVHFGAYGSFSLAESRDEEGAIEIGLVIGRDKLDLLNVVFQRRLNF 460 (463)
Q Consensus 390 ~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~i~p~~~~~g~~ev~v~L~~~~m~~l~~~~~~~~~~ 460 (463)
+.+|||.++++|++|||||+|.++++...+.+|.++++|+++++||++|.|+|++++|++|+++|.+.+++
T Consensus 382 ~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~~~~~ 452 (454)
T 2e1v_A 382 TWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVHIFDDGLKA 452 (454)
T ss_dssp EEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHHHHHHHC--
T ss_pred EEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998766668999999998888999999999999999999999988765
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=8.9e-78 Score=619.45 Aligned_cols=441 Identities=39% Similarity=0.672 Sum_probs=351.6
Q ss_pred eEEEEeEEEeCCCCCCCCceeecccccccccccCccceEEEecCCCCCCcchhchhHHHHHHHHHhhhhccCcceEeeeC
Q 012440 7 VQVVDESHIAPPPGSVPPTVIPLTFLDVSWLFCCPIERILFYELPFPTRHLMQNIIPHLKHSLSLTLHHFFPLAGNLACN 86 (463)
Q Consensus 7 v~v~~~~~v~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~ 86 (463)
|+|.++++|+|+.++++.+.++||.||+++.+.+|++.+|||+.+...++|.+.++++||+||+++|++||||||||+.+
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~ 81 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACP 81 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEE
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEcc
Confidence 89999999999987656799999999998666669999999997643222345679999999999999999999999864
Q ss_pred ---C-CCeEEeeCCCceEEEEEecCCCccccccCccccccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEEeCCCcEEEE
Q 012440 87 ---S-KPFIQFNEGDSVRVTVTESDADFGHLVANHLRDNRAFKPLVPKLPFPFPSVSSDNKTPVMAIQVTVFPNSGISIG 162 (463)
Q Consensus 87 ---~-~~~i~~~~~~gv~~~~~~~~~~~~~l~~~~~~~~~~~~~l~P~~~~~~~~~~~~~~~P~l~vqvt~~~~GG~~l~ 162 (463)
+ +++|+|++++||.|++++++.+++++.++.+.+...++.|+|..+.... .+...+.|++.+|||+|+|||++||
T Consensus 82 ~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~-~~~~~~~pll~vQvT~f~cGG~~lg 160 (453)
T 2xr7_A 82 QDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKD-APGVQLAPVLAIQVTLFPNHGISIG 160 (453)
T ss_dssp SSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEE-ETTEEECCCEEEEEEEETTTEEEEE
T ss_pred CCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCccc-ccccccCCeEEEEEEEccCCcEEEE
Confidence 3 8999998568999999999999999865443345566778887543210 0001228999999999999999999
Q ss_pred EeeecccccccchHHHHHHHHHHhc-cCCCCCCCCCCCCCccCCccccCCCCchhhhhhhhhhccCCCCCC-CCCCCCcC
Q 012440 163 VTFIHVAADGSSFNHFMKSWASIHK-SVTVSETLPPLSLPCHDRNVIKDPNGLLLSIYLKDWRSVHNSDAT-APAIDENV 240 (463)
Q Consensus 163 ~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 240 (463)
+++||.++||.|+++|+++||++|| |.... ..++...|++||+.+..|..+ ...+...+...+ .. .... ...
T Consensus 161 ~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~-~~~~~~~P~~dr~~l~~p~~~-~~~~~~~~~~~~---~~~~~~~-~~~ 234 (453)
T 2xr7_A 161 FTNHHVAGDGATIVKFVRAWALLNKFGGDEQ-FLANEFIPFYDRSVIKDPNGV-GMSIWNEMKKYK---HMMKMSD-VVT 234 (453)
T ss_dssp EEECTTTCCSHHHHHHHHHHHHHHHTTTCGG-GSCGGGSCBCCCSSSCCSSCH-HHHTTTTGGGCT---TTSCCSC-CCC
T ss_pred EeeeeeeechhHHHHHHHHHHHHhhcCCCcc-cCCCCCCCccccccccCCCCc-chHHHHhccccC---Ccccccc-ccC
Confidence 9999999999999999999999999 63110 112235689999988876654 323222221100 00 0000 012
Q ss_pred CCCceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHHHHHHHHHHhhccccccCCCCceEEEEEEecccccc
Q 012440 241 QVDNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSALMWVYMIELQESESEITDGDMIYHFVPVADCRERF 320 (463)
Q Consensus 241 ~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~~~rAr~~~~~~~~~~~~~~l~~~vd~R~rl 320 (463)
+.+.++++|+|++++|++||+.+.+.... ..++|+||+|+||+|+|+++||.+.....++++++.+.++||+|+|+
T Consensus 235 ~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~----~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl 310 (453)
T 2xr7_A 235 PPDKVRGTFIITRHDIGKLKNLVLTRRPK----LTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQF 310 (453)
T ss_dssp CCSCCCEEEEECHHHHHHHHHHHHHHSCC----CSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCS
T ss_pred CCCceEEEEEECHHHHHHHHHHHhhcCCC----CCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccC
Confidence 34677899999999999999999875421 25799999999999999999997620000167899999999999999
Q ss_pred CCCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHh--hhhh-hhhhHHHHHHhhHhhccCCcEEEEeccCC
Q 012440 321 EFPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGE--LEKG-ALVGAEKWTSNLNEVVKTGRVLAVGGSPK 397 (463)
Q Consensus 321 ~pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ssw~~ 397 (463)
+||+|++||||++.++.+.++++||.++++|+++|..||+++.+ .+++ ++++ +|++..+.+. ....+.+|||.+
T Consensus 311 ~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~~~-~~~~~~vssw~~ 387 (453)
T 2xr7_A 311 NPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDKVD-AKRSLSVAGSPK 387 (453)
T ss_dssp SSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCCSC-GGGEEEECSCSS
T ss_pred CCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHhhc-cCCcEEEecccc
Confidence 99999999999999999999999998447999999999999999 5677 8888 7877544332 235899999999
Q ss_pred CccccccccCCccceeEEeeecCCc--eEEEeecCCCCCcEEEEEEeCHHHHHHHHHHHHHHhhhh
Q 012440 398 FGVYETDFGWGRPKKLEFVHFGAYG--SFSLAESRDEEGAIEIGLVIGRDKLDLLNVVFQRRLNFN 461 (463)
Q Consensus 398 ~~~~~~DFG~G~P~~~~~~~~~~~g--~~~i~p~~~~~g~~ev~v~L~~~~m~~l~~~~~~~~~~~ 461 (463)
+++|++|||||+|.++++...+.+| .++++|+++++||++|.|+|++++|++|+++|.+.++++
T Consensus 388 ~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~~~~~~~~~~ 453 (453)
T 2xr7_A 388 LDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAAMFTHGISFL 453 (453)
T ss_dssp CCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHHHHHHHHTTC
T ss_pred CCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHHHHHHHhhhC
Confidence 9999999999999999987666678 888999888889999999999999999999999988753
No 4
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=5.9e-74 Score=584.97 Aligned_cols=411 Identities=22% Similarity=0.325 Sum_probs=331.8
Q ss_pred cceEEEEeEEEeCCCCCCC-CceeecccccccccccCccceEEEecCCCCCCcchhchhHHHHHHHHHhhhhccCcceEe
Q 012440 5 YTVQVVDESHIAPPPGSVP-PTVIPLTFLDVSWLFCCPIERILFYELPFPTRHLMQNIIPHLKHSLSLTLHHFFPLAGNL 83 (463)
Q Consensus 5 ~~v~v~~~~~v~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl 83 (463)
|+|+|.++++|+|+.||+. .+.++||.||++... .|++.+|||+.++......+.++++||+||+++|++||||||||
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 81 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLT-CHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRI 81 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCS-SEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccc-cccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhcccc
Confidence 6799999999999998854 469999999998654 59999999997543110134689999999999999999999999
Q ss_pred eeCCCCeEEeeCCCceEEEEEecCCCccccccCccccccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEEeCCCcEEEEE
Q 012440 84 ACNSKPFIQFNEGDSVRVTVTESDADFGHLVANHLRDNRAFKPLVPKLPFPFPSVSSDNKTPVMAIQVTVFPNSGISIGV 163 (463)
Q Consensus 84 ~~~~~~~i~~~~~~gv~~~~~~~~~~~~~l~~~~~~~~~~~~~l~P~~~~~~~~~~~~~~~P~l~vqvt~~~~GG~~l~~ 163 (463)
+. +++|+|+ ++||.|+++++|++++++....+ +...++.|+|... ....++...+.|++.+|||+|+|||++||+
T Consensus 82 ~~--~~~i~c~-~~Gv~fv~A~~d~~l~~~~~~~p-~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cgG~~lg~ 156 (421)
T 2bgh_A 82 NV--NSSVDCN-DSGVPFVEARVQAQLSQAIQNVV-ELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECGGTAIGV 156 (421)
T ss_dssp ET--TTEEECC-CCCEEEEEEEESSCHHHHHSCCS-SGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTSCEEEEE
T ss_pred CC--CcEEEEc-CCceEEEEEEEcCCHHHHhccCC-ChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCCCEEEEE
Confidence 74 7999997 78999999999999999854322 2335667887642 110011135689999999999999999999
Q ss_pred eeecccccccchHHHHHHHHHHhccCCCCCCCCCCCCCccCC-ccccCC-CCchhhhhhhhhhccCCCCCCCCCCCCcCC
Q 012440 164 TFIHVAADGSSFNHFMKSWASIHKSVTVSETLPPLSLPCHDR-NVIKDP-NGLLLSIYLKDWRSVHNSDATAPAIDENVQ 241 (463)
Q Consensus 164 ~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~P~~dr-~~l~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (463)
++||.++||.|+.+|+++||++|||... + ..|++|| +.+..+ .+. .. . + ...+
T Consensus 157 ~~~H~v~Dg~~~~~fl~~wa~~~rg~~~----~--~~P~~dr~~~l~p~~~~~-~~--------~---------~-~~~~ 211 (421)
T 2bgh_A 157 NLSHKIADVLSLATFLNAWTATCRGETE----I--VLPNFDLAARHFPPVDNT-PS--------P---------E-LVPD 211 (421)
T ss_dssp EEETTTCCHHHHHHHHHHHHHHHTTCSC----C--CCCBCSHHHHHSCCCTTC-CC--------C---------C-CCCC
T ss_pred EeeEEechHHHHHHHHHHHHHHhcCCCC----C--CCCccccccccCCCcccC-CC--------C---------c-cCCc
Confidence 9999999999999999999999998432 2 4688998 655432 222 00 0 0 0113
Q ss_pred CCceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHHHHHHHHHHhhccccccCCCCceEEEEEEeccccccC
Q 012440 242 VDNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSALMWVYMIELQESESEITDGDMIYHFVPVADCRERFE 321 (463)
Q Consensus 242 ~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~~~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~ 321 (463)
.+.++++|+|++++|++||+.+.+... ..++|++|+|+||+|+|+++||.... ++++++.+.++||+|+|++
T Consensus 212 ~~~~~~~f~f~~~~i~~LK~~a~~~~~-----~~~~St~d~l~A~iW~~~~~Ar~~~~---~~~~~~~l~~~vd~R~rl~ 283 (421)
T 2bgh_A 212 ENVVMKRFVFDKEKIGALRAQASSASE-----EKNFSRVQLVVAYIWKHVIDVTRAKY---GAKNKFVVVQAVNLRSRMN 283 (421)
T ss_dssp SSEEEEEEEECHHHHHHHHHHTC----------CCCCHHHHHHHHHHHHHHHHHHHHS---CCCSCEEEEEEEESGGGSS
T ss_pred cceEEEEEEECHHHHHHHHHHhhccCC-----CCCCchhHhHHHHHHHHHHHHhcccC---CCCCceEEEEEecCccccC
Confidence 478899999999999999999876532 15799999999999999999997531 1467899999999999999
Q ss_pred CCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhhhhhhhhhHHHHHHhhHhhccCCcEEEEeccCCCccc
Q 012440 322 FPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGELEKGALVGAEKWTSNLNEVVKTGRVLAVGGSPKFGVY 401 (463)
Q Consensus 322 pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~~ 401 (463)
||+|++|+||++..+.+.+++++ + ++|+++|..||+++.++++++++.+.++.+..... .....+.+|||.++++|
T Consensus 284 pplP~~y~GN~~~~~~~~~~~~~--~-~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vssw~~~~~y 359 (421)
T 2bgh_A 284 PPLPHYAMGNIATLLFAAVDAEW--D-KDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYEL-EPQELLSFTSWCRLGFY 359 (421)
T ss_dssp SCCCTTBCSCCEEEEEEEECTTC--C-CCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHTS-CGGGEEEEEEETTSCGG
T ss_pred CCCCCCccceEEEEEEEEecccc--c-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCCCeEEEeccccCCCc
Confidence 99999999999999999988876 4 89999999999999999999999888776543321 22367999999999999
Q ss_pred cccccCCccceeEEeeecCCceEEEeecCCCCCcEEEEEEeCHHHHHHHHHHHHHHhh
Q 012440 402 ETDFGWGRPKKLEFVHFGAYGSFSLAESRDEEGAIEIGLVIGRDKLDLLNVVFQRRLN 459 (463)
Q Consensus 402 ~~DFG~G~P~~~~~~~~~~~g~~~i~p~~~~~g~~ev~v~L~~~~m~~l~~~~~~~~~ 459 (463)
++|||||+|.++++...+.+|.++++|++++ +|++|.|+|++++|++|++||.+++.
T Consensus 360 ~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~-~gi~v~v~L~~~~m~~f~~e~~~~~~ 416 (421)
T 2bgh_A 360 DLDFGWGKPLSACTTTFPKRNAALLMDTRSG-DGVEAWLPMAEDEMAMLPVELLSLVD 416 (421)
T ss_dssp GCCSSSCCCSEEECCCCCSTTEEEEEECTTS-SSEEEEEEEEHHHHHHSCHHHHTTBC
T ss_pred ccccCCCccCeecccccCcCCEEEEEecCCC-CeEEEEEEcCHHHHHHHHHHHHHhhc
Confidence 9999999999999876667899999999875 47999999999999999998877653
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=1.1e-62 Score=506.99 Aligned_cols=405 Identities=17% Similarity=0.201 Sum_probs=302.0
Q ss_pred eeecccccccc--cccCccceEEEecCCCCCCcchhchhHHHHHHHHHhhhhccCcceEeeeC------C-CCeEEeeCC
Q 012440 26 VIPLTFLDVSW--LFCCPIERILFYELPFPTRHLMQNIIPHLKHSLSLTLHHFFPLAGNLACN------S-KPFIQFNEG 96 (463)
Q Consensus 26 ~~~LS~lD~~~--~~~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~------~-~~~i~~~~~ 96 (463)
.++||.|||+. ++. |++.+|||+.++..+ .+.++++||+||+++|++||||||||+.+ + +++|+|+ +
T Consensus 4 ~~~Ls~lD~~~~~~~~-y~~~~~~y~~~~~~~--~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~-~ 79 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSI-YTQISLLYPVSDSSQ--YPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPF-E 79 (451)
T ss_dssp CEECCGGGGCTTGGGC-EEEEEEEEECSCGGG--HHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECC-C
T ss_pred cccCChhhcCcccccc-ceeEEEEEECCCCCC--HHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeec-C
Confidence 36999999986 354 999999999643211 35679999999999999999999999863 2 6888875 5
Q ss_pred CceEEEEEecCC-----CccccccCccccccccC--CCCCCC--CCCCCCCCCCCCCCeEEEEEEEeCCCcEEEEEeeec
Q 012440 97 DSVRVTVTESDA-----DFGHLVANHLRDNRAFK--PLVPKL--PFPFPSVSSDNKTPVMAIQVTVFPNSGISIGVTFIH 167 (463)
Q Consensus 97 ~gv~~~~~~~~~-----~~~~l~~~~~~~~~~~~--~l~P~~--~~~~~~~~~~~~~P~l~vqvt~~~~GG~~l~~~~~H 167 (463)
.++.|++++++. +++++....+ +...+. .+.|.. +.... .+...+.|++.+|||++ |||++||+++||
T Consensus 80 ~~~~~~va~~~~d~~~p~~~~l~~~~~-p~~~~~~~~~~p~~~~p~~~~-~~~~~~~pll~vQvT~~-~GG~~lg~~~~H 156 (451)
T 2rkv_A 80 DVPRVVVKDLRDDPSAPTIEGMRKAGY-PMAMFDENIIAPRKTLPIGPG-TGPDDPKPVILLQLNFI-KGGLILTVNGQH 156 (451)
T ss_dssp SSCEEEEEECTTCTTSCBHHHHHHHTS-CGGGSBHHHHCSSCSSSCSTT-CSTTSCCBSEEEEEEEE-BTEEEEEEEEET
T ss_pred CCCeEEEEeCCCCCCCCCHHHHHHcCC-ChhhcCHhhcCCcccCCCCcc-cCCCCCCceEEEEEEEe-cCceeeeeeehh
Confidence 566688888764 5777753211 222221 233322 11100 00124589999999988 899999999999
Q ss_pred ccccccchHHHHHHHHHHhccCCCCCCCCC--CCCCccCCccccCC--CCchhhhh-hhhhhccCCCCCCCCCCCCcCCC
Q 012440 168 VAADGSSFNHFMKSWASIHKSVTVSETLPP--LSLPCHDRNVIKDP--NGLLLSIY-LKDWRSVHNSDATAPAIDENVQV 242 (463)
Q Consensus 168 ~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~--~~~P~~dr~~l~~p--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 242 (463)
+++||.|+++|+++||++||| .. +++ ...|++||+.+... ...|...+ +.++...+ ..........
T Consensus 157 ~v~Dg~g~~~Fl~awa~~~rg-~~---~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~ 227 (451)
T 2rkv_A 157 GAMDMVGQDAVIRLLSKACRN-DP---FTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADV-----AGGDAVLTPV 227 (451)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT-CC---CCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTS-----CC-------C
T ss_pred ccccHHHHHHHHHHHHHHhcC-CC---CCccccccccCchhhccccccccCCCccccccccCCCC-----CCCCCCCCCC
Confidence 999999999999999999998 32 221 02478888744311 00101011 11121110 0000001134
Q ss_pred CceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHHHHHHHHHHhh-c-cccccCCCCceEEEEEEecccccc
Q 012440 243 DNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSALMWVYMIELQ-E-SESEITDGDMIYHFVPVADCRERF 320 (463)
Q Consensus 243 ~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~~~rAr-~-~~~~~~~~~~~~~l~~~vd~R~rl 320 (463)
++.+++|+|++++|++||+.+.+.... +..++|++|+|+||+|||+++|| . .. +++++.+.++||+|+|+
T Consensus 228 ~~~~~~f~f~~~~i~~LK~~a~~~~~~---~~~~~St~d~l~A~~Wr~~~~Ar~~~~~-----~~~~~~l~~~vd~R~rl 299 (451)
T 2rkv_A 228 SASWAFFTFSPKAMSELKDAATKTLDA---STKFVSTDDALSAFIWKSASRVRLERID-----GSAPTEFCRAVDARPAM 299 (451)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHTTCCT---TCSCCCHHHHHHHHHHHHHHHHHTTTSC-----TTSEEEEEEEEECHHHH
T ss_pred CceEEEEEECHHHHHHHHHHHhhhccC---CCCCccHHHHHHHHHHHHHHHHHhccCC-----CCCceEEEEEecccccC
Confidence 678999999999999999999876431 12679999999999999999998 2 33 78899999999999999
Q ss_pred CCCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhhhhhh-hhhHHHHHHhhHhh-----c---cCCcEEE
Q 012440 321 EFPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGELEKGA-LVGAEKWTSNLNEV-----V---KTGRVLA 391 (463)
Q Consensus 321 ~pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~~~~~-~~~~~~~~~~~~~~-----~---~~~~~~~ 391 (463)
+ +|++|+||++..+.+.++++||.+ ++|+++|..||+++.+++.++ +++.++|++..++. . ..+.++.
T Consensus 300 ~--lP~~y~GN~~~~~~~~~~~~el~~-~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (451)
T 2rkv_A 300 G--VSNNYPGLLQNMTYHNSTIGEIAN-ESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVM 376 (451)
T ss_dssp T--CCTTCCSCCEEEEEEEEEHHHHHH-SCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEE
T ss_pred C--CCCCCcccceeeecccCcHHHhcc-chHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEE
Confidence 8 899999999999999999999987 899999999999999998888 99999999874321 1 1235699
Q ss_pred EeccCCCcccccccc--CCccceeEEeee-cCCceEEEeecCCCCCcEEEEEEeCHHHHHHHHH--HHHHHh
Q 012440 392 VGGSPKFGVYETDFG--WGRPKKLEFVHF-GAYGSFSLAESRDEEGAIEIGLVIGRDKLDLLNV--VFQRRL 458 (463)
Q Consensus 392 ~ssw~~~~~~~~DFG--~G~P~~~~~~~~-~~~g~~~i~p~~~~~g~~ev~v~L~~~~m~~l~~--~~~~~~ 458 (463)
+|||+++++|++||| ||+|.+++.+.. +.+|.++++|+. ++||++|.|+|++++|++|++ +|.+++
T Consensus 377 ~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~d~ef~~~~ 447 (451)
T 2rkv_A 377 LSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKADKEWTKYA 447 (451)
T ss_dssp EEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHHCHHHHTTC
T ss_pred EeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhcCHHHHhhh
Confidence 999999999999998 899999986543 358899999864 478999999999999999987 565554
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.19 E-value=6.6e-08 Score=97.21 Aligned_cols=294 Identities=14% Similarity=0.054 Sum_probs=164.1
Q ss_pred CCceeecccccccccccCccceEEEecCCCCCCcchhchhHHHHHHHHHhhhhccCcceEeeeCC-CCeEEeeCCCceE-
Q 012440 23 PPTVIPLTFLDVSWLFCCPIERILFYELPFPTRHLMQNIIPHLKHSLSLTLHHFFPLAGNLACNS-KPFIQFNEGDSVR- 100 (463)
Q Consensus 23 ~~~~~~LS~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-~~~i~~~~~~gv~- 100 (463)
....+|||++.+.+....| ...+.|+..... .+++|++++.+++.++|.|-.++...+ +..-...+...+.
T Consensus 4 ~~~~~pls~~Q~~~~~~~y-~~~~~~~l~g~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~ 76 (422)
T 1q9j_A 4 GSVIRKLSHSEEVFAQYEV-FTSMTIQLRGVI------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSG 76 (422)
T ss_dssp TSEEEECCHHHHHHHHTTC-EEEEEEEEESCC------CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCC
T ss_pred CceeecCCHHHHHHHhcCc-eEEEEEEEecCC------CHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCc
Confidence 4678999998876432212 233444444332 378999999999999999999998643 2210111111111
Q ss_pred EEEEecCCCccccccCccccccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEEeCCCcEEEEEeeecccccccchHHHHH
Q 012440 101 VTVTESDADFGHLVANHLRDNRAFKPLVPKLPFPFPSVSSDNKTPVMAIQVTVFPNSGISIGVTFIHVAADGSSFNHFMK 180 (463)
Q Consensus 101 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~P~~~~~~~~~~~~~~~P~l~vqvt~~~~GG~~l~~~~~H~v~Dg~g~~~fl~ 180 (463)
+. ..++.... ....+.. . ... .+ ...|++++.+.. ..++..|.+.+||.++||.++..|++
T Consensus 77 ~~-------~~d~~~~~--~~~~~~~---~-~~~----~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~ 137 (422)
T 1q9j_A 77 IC-------VIDGTAAT--NGSPSGN---A-ELR----LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVD 137 (422)
T ss_dssp CE-------EEC-----------------C-CCC----CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHH
T ss_pred eE-------EEECCCCC--cchhhhc---c-cCc----cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHH
Confidence 11 11221100 0000100 0 000 12 567899998887 67899999999999999999999999
Q ss_pred HHHHHhcc----CCCCCCCCCCCCCccCC--cccc-C------CCCchhhhhhhhhhccCCCCCCCCCCC--CcCCCCce
Q 012440 181 SWASIHKS----VTVSETLPPLSLPCHDR--NVIK-D------PNGLLLSIYLKDWRSVHNSDATAPAID--ENVQVDNV 245 (463)
Q Consensus 181 ~wa~~~rg----~~~~~~~~~~~~P~~dr--~~l~-~------p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 245 (463)
.|.+.+++ +.. .+....++.+- .... . .... . ....+|+....+....++.. ........
T Consensus 138 ~l~~~Y~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~ 212 (422)
T 1q9j_A 138 ELFSRYTDAVTTGDP---GPITPQPTPLSMEAVLAQRGIRKQGLSGA-E-RFMSVMYAYEIPATETPAVLAHPGLPQAVP 212 (422)
T ss_dssp HHHHHHHHHHHSSSC---CCCCCCCCCBCHHHHHHHSSCCC-----C-T-TSSTTTTCC-------------CCSBCCCC
T ss_pred HHHHHHHHhhccCCC---CCCCCCCCCCCHHHHHHhcCCcccccchh-h-hhhhhhhcccCCCcccCCCCCCCCCCCCcc
Confidence 99999973 232 11111122111 0000 0 0000 0 00112322110000011100 01112346
Q ss_pred EEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHHHHHHHHHHhhccccccCCCCceEEEEEEeccccccCCCCC
Q 012440 246 RVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSALMWVYMIELQESESEITDGDMIYHFVPVADCRERFEFPIP 325 (463)
Q Consensus 246 ~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~~~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp 325 (463)
...+.++++..++|++.|.+ ..+|.++++.|.+-..+.|-+. . ......+++++++|.+..|+++
T Consensus 213 ~~~~~l~~~~~~~l~~~a~~---------~~~t~~~~l~aa~~~~l~r~~~-~-----~~~~v~~g~~~~~R~~~~~~~~ 277 (422)
T 1q9j_A 213 VTRLWLSKQQTSDLMAFGRE---------HRLSLNAVVAAAILLTEWQLRN-T-----PHVPIPYVYPVDLRFVLAPPVA 277 (422)
T ss_dssp EEEECCCHHHHHHHHHHHTT---------TTCCHHHHHHHHHHHHHHHHHT-C-----SSCCEEEEEEEETTTTSSSCCC
T ss_pred ceEEEeCHHHHHHHHHHHHH---------hCCCHHHHHHHHHHHHHHhccc-C-----CCceEEEeeeeecccccCCCCC
Confidence 68899999999999998875 3479999999987766665422 2 3567899999999998765544
Q ss_pred CCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhh
Q 012440 326 ASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGEL 365 (463)
Q Consensus 326 ~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~ 365 (463)
..=..|.+.+....+++. .+.++.+++..+++.+.+.
T Consensus 278 ~~~~~~~vG~f~n~lp~~---~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 278 PTEATNLLGAASYLAEIG---PNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp TTTBSCCEEEEEEEECCC---SSCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhheeeeeeeecc---CCCCHHHHHHHHHHHHHHH
Confidence 222345554444444433 1257788888888877763
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.72 E-value=3.1e-05 Score=77.98 Aligned_cols=346 Identities=13% Similarity=0.029 Sum_probs=184.4
Q ss_pred hhHHHHHHHHHhhhhccCcceEeeeCCCCeEEeeCCCceEEEEEecCCCccccccCcccc--c-cccCCCCCCCCCCCCC
Q 012440 61 IIPHLKHSLSLTLHHFFPLAGNLACNSKPFIQFNEGDSVRVTVTESDADFGHLVANHLRD--N-RAFKPLVPKLPFPFPS 137 (463)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~i~~~~~~gv~~~~~~~~~~~~~l~~~~~~~--~-~~~~~l~P~~~~~~~~ 137 (463)
..++|++++..++.++|.|--++...++ .+. +...+.+.+.+ +....... . ..+.... ..+.
T Consensus 34 d~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v~--~~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~-~~~f---- 98 (436)
T 1l5a_A 34 DTTLLLRALHLTVSEIDLFRARFSAQGE-LYW--HPFSPPIDYQD-------LSIHLEAEPLAWRQIEQDL-QRSS---- 98 (436)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEECTTCC-EEE--CSSCCCCEEEE-------CTTCTTHHHHHHHHHHHHH-TSCC----
T ss_pred CHHHHHHHHHHHHHHhheeEEEEEecCC-eEC--CCcCCCccEEe-------CCCCCCHHHHHHHHHHHHh-cCCC----
Confidence 3799999999999999999988875433 111 11111111111 11000000 0 0000000 0011
Q ss_pred CCCCCCCCeEEEEEEEeCCCcEEEEEeeecccccccchHHHHHHHHHHhcc---CCCCCCCCCCCCCccC-----Ccccc
Q 012440 138 VSSDNKTPVMAIQVTVFPNSGISIGVTFIHVAADGSSFNHFMKSWASIHKS---VTVSETLPPLSLPCHD-----RNVIK 209 (463)
Q Consensus 138 ~~~~~~~P~l~vqvt~~~~GG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg---~~~~~~~~~~~~P~~d-----r~~l~ 209 (463)
+....|++++.+.....+...|.+.+||.++||.++..|++.+.+.+.+ +.. .+....++.| +..+.
T Consensus 99 --dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~---~~~~~~~~~~~~~~~~~~~~ 173 (436)
T 1l5a_A 99 --TLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQT---PTAAFKPYQSYLEEEAAYLT 173 (436)
T ss_dssp --CCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCC---CCCCCCCHHHHHHHHHHHHT
T ss_pred --CcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCC---CCCCccCHHHHHHHHHHhhc
Confidence 1245688888888776678999999999999999999999999999974 222 1111111111 00011
Q ss_pred CCCCchhhhhhhhhhcc---CCCCCCCCCCCCc-CCCCceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHH
Q 012440 210 DPNGLLLSIYLKDWRSV---HNSDATAPAIDEN-VQVDNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSA 285 (463)
Q Consensus 210 ~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A 285 (463)
.... .....|+.. ..+....++.... .........+.++++..++|++.|.+. .+|.+.++.|
T Consensus 174 -~~~~---~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~---------~~t~~~~l~a 240 (436)
T 1l5a_A 174 -SHRY---WQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANAN---------QIGWPDALVA 240 (436)
T ss_dssp -SHHH---HHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHT---------TCCHHHHHHH
T ss_pred -cHhH---HHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHh---------CCCHHHHHHH
Confidence 1111 111122211 1111111111011 112345788999999999999988764 4699999988
Q ss_pred HHHHHHHHhhccccccCCCCceEEEEEEeccccccCCCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhh
Q 012440 286 LMWVYMIELQESESEITDGDMIYHFVPVADCRERFEFPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGEL 365 (463)
Q Consensus 286 ~lW~~~~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~ 365 (463)
.+-..+.+- . . ....+++++++|.. +--++-.|+.+......+..+. ..++.+++..+++.+...
T Consensus 241 a~~~~L~~~---~-----g-~dv~ig~~~~~R~~---~~~~~~vG~f~n~lplr~~~~~---~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 241 LCALYLESA---E-----P-DAPWLWLPFMNRWG---SVAANVPGLMVNSLPLLRLSAQ---QTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp HHHHHHHHH---S-----T-TCCEEEEEECCCTT---SGGGGSCSCCCEEEEEECCCCT---TCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh---h-----C-CceEEeeecccCCC---hHHhcCcceEEEEEEEEEecCC---CCCHHHHHHHHHHHHHHH
Confidence 765555433 2 5 67899999999965 2345677887777666654432 267888899988888774
Q ss_pred -hhhhh--hhHHHHHHhhHhh-ccCCcEEEEeccCCCccccccccCCccceeEEeeecCCceEE-EeecCCCCCcEEEEE
Q 012440 366 -EKGAL--VGAEKWTSNLNEV-VKTGRVLAVGGSPKFGVYETDFGWGRPKKLEFVHFGAYGSFS-LAESRDEEGAIEIGL 440 (463)
Q Consensus 366 -~~~~~--~~~~~~~~~~~~~-~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~-i~p~~~~~g~~ev~v 440 (463)
..+.+ ..+.+.+....+. ......+.+.+ ++. . .|+.-..............+.+ +.+. .+|++.+.+
T Consensus 306 ~~h~~~~~~~i~~~l~~~~~~~~lf~~~~~~~~---~~~-~-~~~~~~~~~~~~~~~~~~~l~l~v~~~--~~~~l~~~~ 378 (436)
T 1l5a_A 306 YLHGRYRIEQIEQDQGLNAEQSYFMSPFINILP---FES-P-HFADCQTELKVLASGSAEGINFTFRGS--PQHELCLDI 378 (436)
T ss_dssp HHTTTSCHHHHHHHTTCCTTCCBCCCSEEEEEC---CCC-C-CCTTCEEEEEEEEECCCCSEEEEEEEC--TTSCEEEEE
T ss_pred hhhcCCCHHHHHHHhcccccCCCccceEEEeec---cCc-c-ccCCCeeEEEecCCCCccceEEEEEec--CCCcEEEEE
Confidence 22322 2222222211110 01122233322 211 1 3332221111111111123332 3222 246777777
Q ss_pred Ee-----CHHHHHHHHHHHHHHhhhh
Q 012440 441 VI-----GRDKLDLLNVVFQRRLNFN 461 (463)
Q Consensus 441 ~L-----~~~~m~~l~~~~~~~~~~~ 461 (463)
.. .++.++++.+.|...|...
T Consensus 379 ~y~~~~~~~~~i~~l~~~~~~~l~~l 404 (436)
T 1l5a_A 379 TADLASYPQSHWQSHCERFPRFFEQL 404 (436)
T ss_dssp EEETTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EeChhhCCHHHHHHHHHHHHHHHHHH
Confidence 54 6778888888887776543
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.70 E-value=7.9e-06 Score=84.52 Aligned_cols=260 Identities=13% Similarity=0.123 Sum_probs=150.9
Q ss_pred hhHHHHHHHHHhhhhccCcceEeeeCC-CCeEEeeCCCceEEEEEecCCCccccccCccccccccCCCCCCCCCCCCCCC
Q 012440 61 IIPHLKHSLSLTLHHFFPLAGNLACNS-KPFIQFNEGDSVRVTVTESDADFGHLVANHLRDNRAFKPLVPKLPFPFPSVS 139 (463)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~~-~~~i~~~~~~gv~~~~~~~~~~~~~l~~~~~~~~~~~~~l~P~~~~~~~~~~ 139 (463)
.++.|++++..++.++|.|--++...+ .+.-...+...+.+.+.+ .+-+++.. ..+... .+.
T Consensus 132 d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~~--~~~~~~~~-------~~~~~~--~~f------ 194 (520)
T 2jgp_A 132 ERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHEDVPFALAYSE--VTEEEARE-------LVSSLV--QPF------ 194 (520)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECSCCCCCCEEEE--CCHHHHHH-------HHHHTC--CCC------
T ss_pred CHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECCCCCCceEEEe--CCHHHHHH-------HHHHhc--CCC------
Confidence 479999999999999999998887532 111111111111111111 11011100 000011 011
Q ss_pred CCCCCCeEEEEEEEeCCCcEEEEEeeecccccccchHHHHHHHHHHhccCCCCCCCCCCCCCccCCc-cccC-CCCchhh
Q 012440 140 SDNKTPVMAIQVTVFPNSGISIGVTFIHVAADGSSFNHFMKSWASIHKSVTVSETLPPLSLPCHDRN-VIKD-PNGLLLS 217 (463)
Q Consensus 140 ~~~~~P~l~vqvt~~~~GG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~P~~dr~-~l~~-p~~~~~~ 217 (463)
+....|++++.+.....+...|.+.+||.++||.++..|++.+.+.+++. . +++...++.|-. .... .... ..
T Consensus 195 dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~-~---l~~~~~~~~d~~~~~~~~~~~~-~~ 269 (520)
T 2jgp_A 195 DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGD-V---LPELRIQYKDFAVWQQEFSQSA-AF 269 (520)
T ss_dssp CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTC-C---CCCCSCCHHHHHHHHHHHTTSH-HH
T ss_pred CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccC-C---CCCCCCCHHHHHHHHHHhhcCh-hh
Confidence 12457899988888866779999999999999999999999999999873 2 221111211110 0000 0000 00
Q ss_pred hhhhhhhcc---CCCCCCCCCCC---Cc-CCCCceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHHHHHHH
Q 012440 218 IYLKDWRSV---HNSDATAPAID---EN-VQVDNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSALMWVY 290 (463)
Q Consensus 218 ~~~~~~~~~---~~~~~~~~~~~---~~-~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~ 290 (463)
.....|+.. ..+....++.. +. .........+.++++..++|++.|.+. .+|.+.++.|.+-..
T Consensus 270 ~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~---------~~T~~~~l~aa~a~~ 340 (520)
T 2jgp_A 270 HKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQAT---------GTTLYMVLLAAYNVL 340 (520)
T ss_dssp HHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHH---------TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHc---------CCCHHHHHHHHHHHH
Confidence 111223221 00111111110 01 112345678899999999999988754 368999998876555
Q ss_pred HHHhhccccccCCCCceEEEEEEeccccccCCCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhh
Q 012440 291 MIELQESESEITDGDMIYHFVPVADCRERFEFPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGEL 365 (463)
Q Consensus 291 ~~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~ 365 (463)
+.+-. ......+++++++|..- --++..|+.+.....++..+. ..++.++...+++.+.+.
T Consensus 341 L~~~~--------~~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~---~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 341 LAKYA--------GQEDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKPQR---EKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp HHHHH--------TCSCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECCCT---TSBHHHHHHHHHHHHHHH
T ss_pred HHHhc--------CCCCeEEEeccCCCCch---hhhccEEeeeeeeeEEecCCC---CCCHHHHHHHHHHHHHHH
Confidence 54432 24668999999999752 235677888777666664432 267888888888887764
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.56 E-value=8.5e-06 Score=83.69 Aligned_cols=296 Identities=10% Similarity=-0.001 Sum_probs=163.7
Q ss_pred Cceeecccccccc-------cccCccceEEEecCCCCCCcchhchhHHHHHHHHHhhhhccCcceEeeeCC-CCeEEeeC
Q 012440 24 PTVIPLTFLDVSW-------LFCCPIERILFYELPFPTRHLMQNIIPHLKHSLSLTLHHFFPLAGNLACNS-KPFIQFNE 95 (463)
Q Consensus 24 ~~~~~LS~lD~~~-------~~~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-~~~i~~~~ 95 (463)
+..+|||+.-+.+ +... ....+.|+.+... ..++|++++.+++.++|.|--++...+ .+. ...+
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g~l------d~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~-~v~~ 82 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSGRI------DDDRLAAAADEVLDAFPLLRVNFVDDDGLWM-RTRE 82 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEESSC------CHHHHHHHHHHHHHHCGGGGEEEEESSSEEE-EECS
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeCCC------CHHHHHHHHHHHHHhchhceeEEEccCCEEE-EecC
Confidence 6788998876532 1111 2233445554332 489999999999999999999998654 222 2222
Q ss_pred CCceEEEEEecCC-Cc--cccccCccccccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEEeCCCcEEEEEeeecccccc
Q 012440 96 GDSVRVTVTESDA-DF--GHLVANHLRDNRAFKPLVPKLPFPFPSVSSDNKTPVMAIQVTVFPNSGISIGVTFIHVAADG 172 (463)
Q Consensus 96 ~~gv~~~~~~~~~-~~--~~l~~~~~~~~~~~~~l~P~~~~~~~~~~~~~~~P~l~vqvt~~~~GG~~l~~~~~H~v~Dg 172 (463)
.. +.+.+.+... +- +++.. ......- .+. +....|++++.+.....+...|.+.+||.++||
T Consensus 83 ~~-~~~~~~d~~~~~~~~~~~~~-------~~~~~~~-~~f------dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg 147 (493)
T 4hvm_A 83 NA-DALVRSDLRGHPDPQARCVE-------LLRADRD-RPT------DPERDPLVRLHLVRLSETDVVLGVVAHQMLLDA 147 (493)
T ss_dssp CC-CCEEEEECTTSSSHHHHHHH-------HHHHHHS-SCC------CTTTSCSEEEEEEECSSSEEEEEEEEETTTCCH
T ss_pred CC-CCceEEECCCCCchHHHHHH-------HHHHHhc-CCC------CCCCCCeEEEEEEEECCCcEEEEEecchhhccH
Confidence 22 4333332110 00 01100 0000000 011 124568999998888656689999999999999
Q ss_pred cchHHHHHHHHHHhccCCCCCCCCCCCCCccCCcccc-C--CCCchhhhhhhhhhcc---CCCCCCCCCCCCcCCCCceE
Q 012440 173 SSFNHFMKSWASIHKSVTVSETLPPLSLPCHDRNVIK-D--PNGLLLSIYLKDWRSV---HNSDATAPAIDENVQVDNVR 246 (463)
Q Consensus 173 ~g~~~fl~~wa~~~rg~~~~~~~~~~~~P~~dr~~l~-~--p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 246 (463)
.++..|++.+.+.+.| .. ++ .++.|-.... . ............|+.. ..+. + ...+........
T Consensus 148 ~S~~~l~~~l~~~Y~g-~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~-l--~~~~~~~~~~~~ 217 (493)
T 4hvm_A 148 RSRYMVLGAVWQAYYG-RF----RP--AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPV-R--GGDGGPVGPPET 217 (493)
T ss_dssp HHHHHHHHHHHHHHTT-CC----CG--GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCC-C--C-------CCEE
T ss_pred HHHHHHHHHHHHHhCC-CC----CC--cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCC-C--CCCCCCCCCCee
Confidence 9999999999999965 32 11 2221211100 1 0000011111223221 0111 1 110111122667
Q ss_pred EEEEeCHHHHHHHHHHHHhcccCCCCCCCccc--HHHHHHHHHHHHHHHhhcc---ccccCCCCceEEEEEEeccccccC
Q 012440 247 VTLVPSRDQIDKLKQRVSAQIRSDDESPSRVS--TFVVTSALMWVYMIELQES---ESEITDGDMIYHFVPVADCRERFE 321 (463)
Q Consensus 247 ~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vS--t~d~l~A~lW~~~~rAr~~---~~~~~~~~~~~~l~~~vd~R~rl~ 321 (463)
..+.++.+..++|++.|.+ ..+| .+.++.|.+-..+.+-+.- ............+++++++|..
T Consensus 218 ~~~~l~~~~~~~l~~~a~~---------~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~-- 286 (493)
T 4hvm_A 218 SRLRVPGSRWQALTEPGGP---------LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDH-- 286 (493)
T ss_dssp EEEEEEHHHHHHHHCC---------------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHH--
T ss_pred EEEEcCHHHHHHHHHHHHH---------cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCC--
Confidence 8899999999999987764 3468 9999999866655544110 0000013567999999999976
Q ss_pred CCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhh
Q 012440 322 FPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGEL 365 (463)
Q Consensus 322 pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~ 365 (463)
+--++.+|+++......+..+.... .++.+++..+++.+.+.
T Consensus 287 -~~~~~~vG~f~n~lplr~~~~~~~~-~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 287 -LQLGSVVGPLTDRVVFGVDLTGLRE-PSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp -TTCCSBCSCCEEEEEEEEECTTCSS-CBHHHHHHHHHHHHHHH
T ss_pred -cchhcCeEeeeceeEEEEecCCCcC-CCHHHHHHHHHHHHHHH
Confidence 2456778888877777765554222 67888888888887774
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.52 E-value=4.8e-05 Score=77.29 Aligned_cols=299 Identities=10% Similarity=0.023 Sum_probs=166.2
Q ss_pred Cceeeccccccccc-----ccCccceEEEecCCCCCCcchhchhHHHHHHHHHhhhhccCcceEeeeCC-CCeEEeeC--
Q 012440 24 PTVIPLTFLDVSWL-----FCCPIERILFYELPFPTRHLMQNIIPHLKHSLSLTLHHFFPLAGNLACNS-KPFIQFNE-- 95 (463)
Q Consensus 24 ~~~~~LS~lD~~~~-----~~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-~~~i~~~~-- 95 (463)
...+|||+..+.+. ........+.|+.+... ..+.|+++|..++.+++.|--++...+ .+.-...+
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~l------d~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~ 88 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGF------DPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLG 88 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCC------CHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSS
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCC------CHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccc
Confidence 57888988765211 11112233445555432 489999999999999999999998643 33222221
Q ss_pred CCceEEEEEecC--CCccccccCccccccccCCCCCCCCCCCCCCCCCCCCCeEEEEEEEeCCCcEEEEEeeeccccccc
Q 012440 96 GDSVRVTVTESD--ADFGHLVANHLRDNRAFKPLVPKLPFPFPSVSSDNKTPVMAIQVTVFPNSGISIGVTFIHVAADGS 173 (463)
Q Consensus 96 ~~gv~~~~~~~~--~~~~~l~~~~~~~~~~~~~l~P~~~~~~~~~~~~~~~P~l~vqvt~~~~GG~~l~~~~~H~v~Dg~ 173 (463)
...+.+.+.+.. .+.++.... ..+.+. .+. +....|++++.+.... ++-.|-+.+||.++||.
T Consensus 89 ~~~~~~~~~d~~~~~~~~~~~~~------~~~~~~--~~f------dl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~ 153 (466)
T 2xhg_A 89 GQLYDFFSYNLTAQPDVQQAIEA------ETQRLH--SSM------NLQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGI 153 (466)
T ss_dssp SCCCEEEEEECTTCSCHHHHHHH------HHHHHH--TTC------CTTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHH
T ss_pred cccceeEEEecCCcccHHHHHHH------HHHHHH--hcc------CCCCCCeEEEEEEEcC-CCCEEEEEeeeeeechh
Confidence 112333322211 011110000 000000 011 1245689999998885 55557799999999999
Q ss_pred chHHHHHHHHHHhccC---CCCCCCCCCCCCccCCc-ccc---CCCCc-hhhhhhhh-hhccCCCCCCCCCCC---Cc-C
Q 012440 174 SFNHFMKSWASIHKSV---TVSETLPPLSLPCHDRN-VIK---DPNGL-LLSIYLKD-WRSVHNSDATAPAID---EN-V 240 (463)
Q Consensus 174 g~~~fl~~wa~~~rg~---~~~~~~~~~~~P~~dr~-~l~---~p~~~-~~~~~~~~-~~~~~~~~~~~~~~~---~~-~ 240 (463)
++..|++.+.+.+++. .. ..+++...++.|-. ... ..... ....+..+ +...+ + ..++.. .. .
T Consensus 154 S~~~l~~el~~~Y~~~~~g~~-~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~-~--~~lp~~~~~~~~~ 229 (466)
T 2xhg_A 154 SWRILFEDLATGYAQALAGQA-ISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAK-N--VSLPKDYEVTDCK 229 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC-CCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCC-C--CCCCCSSCCSSCB
T ss_pred hHHHHHHHHHHHHHHHHcCCC-CCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCC-c--ccCCccccccccc
Confidence 9999999999998641 21 01211111111100 000 00000 00011111 11101 0 011110 01 1
Q ss_pred CCCceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHHHHHHHHHHhhccccccCCCCceEEEEEEecccccc
Q 012440 241 QVDNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSALMWVYMIELQESESEITDGDMIYHFVPVADCRERF 320 (463)
Q Consensus 241 ~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~~~rAr~~~~~~~~~~~~~~l~~~vd~R~rl 320 (463)
........+.++++..++|++.|.+. ..+|.++++.|.+-..+.+-. ......+++++++|...
T Consensus 230 ~~~~~~~~~~l~~~~~~~l~~~~~~~--------~~~t~~~~llaa~~~~l~~~~--------~~~dv~ig~~~~gR~~~ 293 (466)
T 2xhg_A 230 QKSVRNMRIRLHPEETEQLLKHANQA--------YQTEINDLLLAALGLAFAEWS--------KLAQIVIHLEGHGREDI 293 (466)
T ss_dssp GGGEEEEEEECCHHHHHHHHHTGGGT--------TTCCHHHHHHHHHHHHHHHHH--------CCSEEEEEEEECCCCSC
T ss_pred cccceEEEEEcCHHHHHHHHHHhHHh--------hCCCHHHHHHHHHHHHHHHHh--------CCCceEEEecCCCCCcc
Confidence 12345678899999999998876543 246899999888665555432 34568999999999764
Q ss_pred CC-CCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhhh
Q 012440 321 EF-PIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGELE 366 (463)
Q Consensus 321 ~p-plp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~~ 366 (463)
.+ +--.+-+|+.+......+.++. ..++.+++..|++.+....
T Consensus 294 ~~~~~~~~~vG~f~n~lplr~~~~~---~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 294 IEQANVARTVGWFTSQYPVLLDLKQ---TAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp STTCCCTTCCSCCCEEEEEEEECSC---CCSHHHHHHHHHHHHHHSG
T ss_pred ccCCCccccccceeeeccEEEecCC---CCCHHHHHHHHHHHHHhCc
Confidence 21 2235677887776666654432 2678999999999988763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.07 E-value=0.00037 Score=80.18 Aligned_cols=266 Identities=12% Similarity=0.057 Sum_probs=151.2
Q ss_pred hhHHHHHHHHHhhhhccCcceEeeeCC--CCeEEeeCCCceEEEEEecCCCccccccCcccc-ccccCCCCC---CCCCC
Q 012440 61 IIPHLKHSLSLTLHHFFPLAGNLACNS--KPFIQFNEGDSVRVTVTESDADFGHLVANHLRD-NRAFKPLVP---KLPFP 134 (463)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~~--~~~i~~~~~~gv~~~~~~~~~~~~~l~~~~~~~-~~~~~~l~P---~~~~~ 134 (463)
.++.|++++.+++.+++.|--++...+ .+.-...+...+.+.+.+ +....... ...+..++- ..+.
T Consensus 48 d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~~~f- 119 (1304)
T 2vsq_A 48 NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEID-------LTHLTGSEQTAKINEYKEQDKIRGF- 119 (1304)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEEE-------CTTSCHHHHHHHHHHHHHHHHHHCC-
T ss_pred CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEEE-------CCCCCchhHHHHHHHHHHHHhcCCC-
Confidence 479999999999999999999987543 111111112122222211 11000000 000000000 0011
Q ss_pred CCCCCCCCCCCeEEEEEEEeCCCcEEEEEeeecccccccchHHHHHHHHHHhccCCCC--CCCCCCCCCccCCc-cccCC
Q 012440 135 FPSVSSDNKTPVMAIQVTVFPNSGISIGVTFIHVAADGSSFNHFMKSWASIHKSVTVS--ETLPPLSLPCHDRN-VIKDP 211 (463)
Q Consensus 135 ~~~~~~~~~~P~l~vqvt~~~~GG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~--~~~~~~~~P~~dr~-~l~~p 211 (463)
+....|++++.+.....+...|.+.+||.++||.++..|++.+.+.+++...+ ..+++ ..++.|-. .+...
T Consensus 120 -----dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~-~~~y~d~~~~~~~~ 193 (1304)
T 2vsq_A 120 -----DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPP-VKPYKDYIKWLEKQ 193 (1304)
T ss_dssp -----CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCC-CCCTHHHHHHHHTS
T ss_pred -----CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCC-cccHHHHHHHHhcc
Confidence 12456899999988876789999999999999999999999999998752110 01211 11221110 01111
Q ss_pred CCchhhhhhhhhhcc---CCCCCCCCCCCC--c-CCCCceEEEEEeCHHHHHHHHHHHHhcccCCCCCCCcccHHHHHHH
Q 012440 212 NGLLLSIYLKDWRSV---HNSDATAPAIDE--N-VQVDNVRVTLVPSRDQIDKLKQRVSAQIRSDDESPSRVSTFVVTSA 285 (463)
Q Consensus 212 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~-~~~~~~~~~f~f~~~~l~~Lk~~a~~~~~~~~~~~~~vSt~d~l~A 285 (463)
.. . .. .+|+.. ..+....++... . .........+.++++..++||+.|.+. .+|.+.++.|
T Consensus 194 -~~-~-~~-~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---------~~T~~~vlla 260 (1304)
T 2vsq_A 194 -DK-Q-AS-LRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ---------HTTLSTALQA 260 (1304)
T ss_dssp -CH-H-HH-HHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT---------TCCHHHHHHH
T ss_pred -hh-h-HH-HHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc---------CCCHHHHHHH
Confidence 11 1 11 122211 001101111100 1 112345677889999999999998764 3689999988
Q ss_pred HHHHHHHHhhccccccCCCCceEEEEEEeccccccCCCCCCCCcccceeeeeeeeccccccCcccHHHHHHHHHHHHHhh
Q 012440 286 LMWVYMIELQESESEITDGDMIYHFVPVADCRERFEFPIPASYFGNCLAFLFISAKRSELMGKEGVVFAAKAIGRKIGEL 365 (463)
Q Consensus 286 ~lW~~~~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~y~GN~~~~~~~~~~~~~l~~~~~l~~~A~~iR~ai~~~ 365 (463)
.+-..+.|- . ......+++++++|.+..+ --++-.|+.+.....+..++. ..++.++...+++.+...
T Consensus 261 a~a~~L~r~---t-----g~~dvv~G~pvsgR~~~~~-~~~~~vG~fvntlplr~~~~~---~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 261 VWSVLISRY---Q-----QSGDLAFGTVVSGRPAEIK-GVEHMVGLFINVVPRRVKLSE---GITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp HHHHHHHHH---H-----TCSEEEEEEEECCCCTTST-TGGGCCSSCCEEEEEEEECCT---TCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh---c-----CCCCEEEEEEeCCCCccch-hhhcccccceeEEEEEecCCC---CCcHHHHHHHHHHHHHHh
Confidence 755444433 2 3467899999999975322 224667777766666654432 267888999998887764
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.92 E-value=0.0016 Score=67.06 Aligned_cols=370 Identities=12% Similarity=0.053 Sum_probs=181.5
Q ss_pred hchhHHHHHHHHHhhhhccCcceEeeeCC--CCeEEeeCC--C-c------eEEEEEecCCCcccccc---------Ccc
Q 012440 59 QNIIPHLKHSLSLTLHHFFPLAGNLACNS--KPFIQFNEG--D-S------VRVTVTESDADFGHLVA---------NHL 118 (463)
Q Consensus 59 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~--~~~i~~~~~--~-g------v~~~~~~~~~~~~~l~~---------~~~ 118 (463)
++..+.||.+...+--++|-+|+++..++ ++.+.|..- + - =.|++.+.+.+-+|+.+ +..
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~~ 151 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAANDN 151 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-C
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhcccccC
Confidence 46788999999998889999999998653 334444311 1 0 01333332333333311 000
Q ss_pred ccccccC--CCCCCCCCCCCCCCCCCCCCeEEEEEEEeCCC--cEEEEEeeecccccccchHHHHHHHHHHhccCCCC--
Q 012440 119 RDNRAFK--PLVPKLPFPFPSVSSDNKTPVMAIQVTVFPNS--GISIGVTFIHVAADGSSFNHFMKSWASIHKSVTVS-- 192 (463)
Q Consensus 119 ~~~~~~~--~l~P~~~~~~~~~~~~~~~P~l~vqvt~~~~G--G~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~-- 192 (463)
.+..... -+.|.. ..+.| + .+ -.-|.+.+||.++||.|...|++.+=+........
T Consensus 152 ~p~~~~~l~~v~~~~---------~~~~~--------~-p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~ 213 (519)
T 3fot_A 152 TPSKSIELFLLSDVS---------TDSTP--------I-PQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSD 213 (519)
T ss_dssp CCCCSCEEEEEESSS---------STTSC--------C-CTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-C
T ss_pred CCccceEEEEEeccc---------ccccc--------C-CCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCC
Confidence 0110000 000100 01111 3 24 46777889999999999999999887777531100
Q ss_pred -CCCC---C-----CCCCccCCccccCCCC-c-hhh-hhhhhhhcc--CCCCCCCCCCCCcCCCCceEEEEEeCHHHHHH
Q 012440 193 -ETLP---P-----LSLPCHDRNVIKDPNG-L-LLS-IYLKDWRSV--HNSDATAPAIDENVQVDNVRVTLVPSRDQIDK 258 (463)
Q Consensus 193 -~~~~---~-----~~~P~~dr~~l~~p~~-~-~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~ 258 (463)
..++ + ..+|..+ ..+..|.. . ++. ....++... .......++. ...+..-....+.|++++.++
T Consensus 214 ~~~~~~~~~g~E~~~L~P~~e-~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~-~~~~~~~~~~~~~ls~~~t~~ 291 (519)
T 3fot_A 214 SREMKKIQWGQEIKNLSPPVV-DSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKF-QPGLALPRCVIHKLSADESID 291 (519)
T ss_dssp GGGSCCCCTTTTGGGSCCCTG-GGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBC-CCCCCCEEEEEEECCHHHHHH
T ss_pred ccCCCcCCCCcccccCCcCHH-HHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCC-CCCCCCcceEEEEcCHHHHHH
Confidence 0010 0 0011110 11111211 1 010 011111100 0000011111 011112335778999999999
Q ss_pred HHHHHHhcccCCCCCCCcccHHHHHHHHHHHHHHHhhccccccCCCCceEEEEEEeccccccCCCCCCCCcccceeeeee
Q 012440 259 LKQRVSAQIRSDDESPSRVSTFVVTSALMWVYMIELQESESEITDGDMIYHFVPVADCRERFEFPIPASYFGNCLAFLFI 338 (463)
Q Consensus 259 Lk~~a~~~~~~~~~~~~~vSt~d~l~A~lW~~~~rAr~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~y~GN~~~~~~~ 338 (463)
|++.|++..+ +.+|-+.+|.|.+-.++.+...... ..........++||+|+++.++.-.+|+|.+......
T Consensus 292 L~~~ck~~~~------~g~Tvt~~l~Aa~~~al~~~~~~~~--~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~ 363 (519)
T 3fot_A 292 IVKAVKTRLG------PGFTISHLTQAAIVLALLDHLKPND--LSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVV 363 (519)
T ss_dssp HHHHHHHHTC------TTCCHHHHHHHHHHHHHHHHC------CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEE
T ss_pred HHHHHHhcCC------CCeeHHHHHHHHHHHHHHhhcCCcc--cCCCccEEEEeeeeccccCCCcccccccceeeeeeee
Confidence 9999998743 5689999998877666665321100 0123468899999999999765556889988876665
Q ss_pred eecc-cc---------ccCcccHHHHHHHHHHHHHhh-hhhhhhhHHHHHHh-hHhh------cc-CCcEEEEeccCCCc
Q 012440 339 SAKR-SE---------LMGKEGVVFAAKAIGRKIGEL-EKGALVGAEKWTSN-LNEV------VK-TGRVLAVGGSPKFG 399 (463)
Q Consensus 339 ~~~~-~~---------l~~~~~l~~~A~~iR~ai~~~-~~~~~~~~~~~~~~-~~~~------~~-~~~~~~~ssw~~~~ 399 (463)
..+. .. +..+..+.++|..+++..... ++.+++.+.-++.. ...+ .+ ......+||.-.+.
T Consensus 364 ~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~~~~tp~lSslG~vd 443 (519)
T 3fot_A 364 RIENLKSITVSHKDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEGEANPLFISDGINE 443 (519)
T ss_dssp EECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCSBCCCEEEEEEEGG
T ss_pred EecCccccccccchhhhhhHhHHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCCCccCcccccCCccc
Confidence 4422 21 111001456666676655552 33344433222221 1111 11 12334556644333
Q ss_pred cc-ccccc---CCcc-ceeEEeee--c-C-CceEEEeecCCCCCcEEEEEE-----eCHHHHHHHHHHHHHHh
Q 012440 400 VY-ETDFG---WGRP-KKLEFVHF--G-A-YGSFSLAESRDEEGAIEIGLV-----IGRDKLDLLNVVFQRRL 458 (463)
Q Consensus 400 ~~-~~DFG---~G~P-~~~~~~~~--~-~-~g~~~i~p~~~~~g~~ev~v~-----L~~~~m~~l~~~~~~~~ 458 (463)
=| .-.+| .|.. ..+.-..+ . . ....+-+-+. +|-+.+.++ .+++.|+.|.+++.++|
T Consensus 444 ~~lp~~y~~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~Tf--~g~L~l~~~yn~a~~~~e~v~~~l~~v~~~L 514 (519)
T 3fot_A 444 RFIPHEIKQTATGENVLSVESIDFVVNQSLPYLAIRLDSW--RDASTLNIIYNDANYTEAEVQKYLQSIVEFM 514 (519)
T ss_dssp GTSCSEEEETTTTEEEEEEEEEEEEECCCSSSCEEEEEEE--TTEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred cccchhhccccCCCCceEEEEEEEEccccCCceEEEEEEE--CCEEEEEEEeccccCCHHHHHHHHHHHHHHH
Confidence 11 22454 2322 22222211 1 1 1122222333 244555555 46789999999888765
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=75.46 E-value=1.8 Score=38.62 Aligned_cols=45 Identities=13% Similarity=0.297 Sum_probs=33.8
Q ss_pred CCCeEEEEEEEeCCCc--EEEEEeeecccccccchHHHHHHHHHHhc
Q 012440 143 KTPVMAIQVTVFPNSG--ISIGVTFIHVAADGSSFNHFMKSWASIHK 187 (463)
Q Consensus 143 ~~P~l~vqvt~~~~GG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (463)
..|++.+--..-+.|. +-|++++||.++||.-+..|++.+.+...
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 3588865322222233 68899999999999999999999988764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=74.28 E-value=2 Score=38.42 Aligned_cols=44 Identities=18% Similarity=0.307 Sum_probs=32.1
Q ss_pred CCCeEEEEEEEeCCCc--EEEEEeeecccccccchHHHHHHHHHHh
Q 012440 143 KTPVMAIQVTVFPNSG--ISIGVTFIHVAADGSSFNHFMKSWASIH 186 (463)
Q Consensus 143 ~~P~l~vqvt~~~~GG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~ 186 (463)
..|++.+=-..-+.|. +-|++++||.++||.-+..|++.+.+..
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 4688764211111232 6889999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=74.00 E-value=2 Score=38.42 Aligned_cols=44 Identities=11% Similarity=0.263 Sum_probs=33.8
Q ss_pred CCeEEEEEEEeCCCc--EEEEEeeecccccccchHHHHHHHHHHhc
Q 012440 144 TPVMAIQVTVFPNSG--ISIGVTFIHVAADGSSFNHFMKSWASIHK 187 (463)
Q Consensus 144 ~P~l~vqvt~~~~GG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (463)
.|++.+--..-+.|. +-|++++||.++||.-...|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 588865333222233 78899999999999999999999998775
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=69.97 E-value=2.4 Score=38.06 Aligned_cols=30 Identities=13% Similarity=0.275 Sum_probs=27.3
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhcc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHKS 188 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (463)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 558999999999999999999999998854
No 17
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=69.88 E-value=2.8 Score=38.13 Aligned_cols=29 Identities=10% Similarity=0.303 Sum_probs=27.0
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHK 187 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (463)
+-|+++++|.++||.-+..|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=69.84 E-value=2.9 Score=37.83 Aligned_cols=30 Identities=13% Similarity=0.286 Sum_probs=27.3
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhcc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHKS 188 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (463)
+-|+++++|.++||.-...|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999988753
No 19
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=68.96 E-value=2.6 Score=38.27 Aligned_cols=29 Identities=14% Similarity=0.284 Sum_probs=27.1
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHK 187 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (463)
+-|+++++|.++||.-+..|++.+.+...
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998774
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=68.39 E-value=3.2 Score=38.28 Aligned_cols=29 Identities=21% Similarity=0.421 Sum_probs=26.8
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHK 187 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (463)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999998875
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=62.90 E-value=4.7 Score=36.96 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=27.5
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhcc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHKS 188 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (463)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999999864
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=61.61 E-value=5.1 Score=36.55 Aligned_cols=30 Identities=23% Similarity=0.430 Sum_probs=27.4
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhcc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHKS 188 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (463)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998863
No 23
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=59.28 E-value=8.1 Score=20.71 Aligned_cols=19 Identities=21% Similarity=0.279 Sum_probs=16.5
Q ss_pred CCcccHHHHHHHHHHHHHH
Q 012440 274 PSRVSTFVVTSALMWVYMI 292 (463)
Q Consensus 274 ~~~vSt~d~l~A~lW~~~~ 292 (463)
++-+++.|-|+-++|+++.
T Consensus 5 psvftsqdylsdhlwraln 23 (26)
T 2xl1_A 5 PSVFTSQDYLSDHLWRALN 23 (26)
T ss_pred CceeecHHHHHHHHHHHHh
Confidence 4678999999999999875
No 24
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=56.59 E-value=11 Score=26.03 Aligned_cols=36 Identities=11% Similarity=0.174 Sum_probs=29.1
Q ss_pred hchhHHHHHHHHHhhhhccCcceEeeeC--C-CCeEEee
Q 012440 59 QNIIPHLKHSLSLTLHHFFPLAGNLACN--S-KPFIQFN 94 (463)
Q Consensus 59 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~--~-~~~i~~~ 94 (463)
.++.+.++++|...+.+-..+||.+... + .++|.+.
T Consensus 9 gddleafekalkemirqarkfagtvtytldgndleirit 47 (85)
T 2kl8_A 9 GDDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp CSSHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEe
Confidence 3468899999999999999999999863 3 6667654
No 25
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=43.44 E-value=5 Score=39.82 Aligned_cols=29 Identities=14% Similarity=0.331 Sum_probs=0.0
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHK 187 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 187 (463)
+-|++++||.++||.-...|++.+.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 45999999999999999999999988775
No 26
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=32.95 E-value=1e+02 Score=19.99 Aligned_cols=24 Identities=25% Similarity=0.245 Sum_probs=20.7
Q ss_pred eEEEEEeCHHHHHHHHHHHHhccc
Q 012440 245 VRVTLVPSRDQIDKLKQRVSAQIR 268 (463)
Q Consensus 245 ~~~~f~f~~~~l~~Lk~~a~~~~~ 268 (463)
....|+||+++-+.|++.|.++..
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~e 25 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEEE 25 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTTS
T ss_pred ceEEEEecHHHHHHHHHHHHHHHH
Confidence 356899999999999999998754
No 27
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=27.79 E-value=30 Score=27.06 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=27.6
Q ss_pred chhHHHHHHHHHhhhhccCcceEeeeC--C-CCeEEee
Q 012440 60 NIIPHLKHSLSLTLHHFFPLAGNLACN--S-KPFIQFN 94 (463)
Q Consensus 60 ~~~~~L~~sL~~~L~~~p~LaGrl~~~--~-~~~i~~~ 94 (463)
++.+.|+++|...+.+-..+||.+... + ++.|.+.
T Consensus 92 ddlea~ekalkemirqarkfagtvtytl~gn~l~i~it 129 (170)
T 4hhu_A 92 DDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 129 (170)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 458999999999999999999999863 2 4555443
No 28
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=22.54 E-value=32 Score=26.91 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHhhhhccCcceEeeeC--C-CCeEEe
Q 012440 61 IIPHLKHSLSLTLHHFFPLAGNLACN--S-KPFIQF 93 (463)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~--~-~~~i~~ 93 (463)
+.+.|+++|...+.+-..+||.+... + ++.|.+
T Consensus 12 dlea~ekalkemirqarkfagtvtytl~gn~l~i~i 47 (170)
T 4hhu_A 12 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVI 47 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEE
Confidence 57999999999999999999999863 2 444444
No 29
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=21.30 E-value=51 Score=36.82 Aligned_cols=30 Identities=17% Similarity=0.336 Sum_probs=27.0
Q ss_pred EEEEEeeecccccccchHHHHHHHHHHhcc
Q 012440 159 ISIGVTFIHVAADGSSFNHFMKSWASIHKS 188 (463)
Q Consensus 159 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 188 (463)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999988887653
Done!