Query 012441
Match_columns 463
No_of_seqs 130 out of 535
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 09:31:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012441.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012441hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cl4a_ g.40.1.1 (A:) Nucleoca 13.8 25 0.0018 19.5 0.6 6 457-462 7-12 (32)
2 d1emxa_ g.3.6.2 (A:) Heteropda 13.7 23 0.0017 18.9 0.4 6 454-459 18-23 (30)
3 d1dsva_ g.40.1.1 (A:) Nucleic 13.7 24 0.0017 19.5 0.5 6 457-462 7-12 (31)
4 d2outa2 d.344.1.1 (A:4-70) Mu- 9.8 27 0.002 22.2 -0.1 14 448-462 9-22 (67)
5 d1ehsa_ g.2.1.1 (A:) Heat-stab 7.3 46 0.0033 19.3 0.1 7 457-463 20-26 (48)
6 d2ghfa2 g.37.1.1 (A:9-44) Zinc 6.8 45 0.0033 18.6 -0.1 9 451-459 6-14 (36)
7 d3dtub2 f.17.2.1 (B:30-129) Ba 6.7 3.7E+02 0.027 18.3 6.8 16 90-105 69-84 (100)
8 d2o39c1 g.18.1.1 (C:1-62) CD46 6.0 56 0.0041 20.7 -0.0 7 456-462 28-34 (62)
9 d1j2jb_ a.7.8.1 (B:) ADP-ribos 5.5 2.9E+02 0.021 15.8 3.4 25 296-320 10-34 (41)
10 d1xoub_ a.231.1.2 (B:) EspA ch 5.5 61 0.0044 21.2 -0.1 6 451-456 56-61 (84)
No 1
>d1cl4a_ g.40.1.1 (A:) Nucleocapsid protein from mason-pfizer monkey virus (MPMV) {Mason-pfizer monkey virus [TaxId: 11855]}
Probab=13.76 E-value=25 Score=19.53 Aligned_cols=6 Identities=33% Similarity=1.270 Sum_probs=4.8
Q ss_pred ccccCC
Q 012441 457 KCRKGF 462 (463)
Q Consensus 457 ~~~~~~ 462 (463)
+||||+
T Consensus 7 rC~kG~ 12 (32)
T d1cl4a_ 7 RCKRGK 12 (32)
T ss_dssp SCSSCS
T ss_pred cccCcc
Confidence 788886
No 2
>d1emxa_ g.3.6.2 (A:) Heteropdatoxin 2, hptx2 {Giant crab spider (Heteropoda venatoria) [TaxId: 152925]}
Probab=13.72 E-value=23 Score=18.86 Aligned_cols=6 Identities=83% Similarity=1.802 Sum_probs=3.6
Q ss_pred cccccc
Q 012441 454 EGYKCR 459 (463)
Q Consensus 454 ~~~~~~ 459 (463)
|||-||
T Consensus 18 eg~vcr 23 (30)
T d1emxa_ 18 EGYVCR 23 (30)
T ss_dssp TTBCCS
T ss_pred hhhhhh
Confidence 566665
No 3
>d1dsva_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=13.70 E-value=24 Score=19.49 Aligned_cols=6 Identities=50% Similarity=1.763 Sum_probs=4.7
Q ss_pred ccccCC
Q 012441 457 KCRKGF 462 (463)
Q Consensus 457 ~~~~~~ 462 (463)
+||||+
T Consensus 7 rC~kG~ 12 (31)
T d1dsva_ 7 RCKKGY 12 (31)
T ss_dssp TTCSSB
T ss_pred cccCcc
Confidence 688886
No 4
>d2outa2 d.344.1.1 (A:4-70) Mu-like prophage FluMu protein gp35, HI1506 {Haemophilus influenzae [TaxId: 727]}
Probab=9.84 E-value=27 Score=22.16 Aligned_cols=14 Identities=50% Similarity=1.118 Sum_probs=10.8
Q ss_pred HHhhhhcccccccCC
Q 012441 448 IQLKLSEGYKCRKGF 462 (463)
Q Consensus 448 ~~~~~~~~~~~~~~~ 462 (463)
.|||..+||. |.||
T Consensus 9 VqNriKdGYR-RAGf 22 (67)
T d2outa2 9 VQNRIKEGYR-RAGF 22 (67)
T ss_dssp EECCSCSCCC-CSSS
T ss_pred EEeecchhhh-hcCe
Confidence 5899999996 5555
No 5
>d1ehsa_ g.2.1.1 (A:) Heat-stable enterotoxin B {Escherichia coli [TaxId: 562]}
Probab=7.28 E-value=46 Score=19.28 Aligned_cols=7 Identities=71% Similarity=1.668 Sum_probs=3.8
Q ss_pred ccccCCC
Q 012441 457 KCRKGFL 463 (463)
Q Consensus 457 ~~~~~~~ 463 (463)
.|.|||+
T Consensus 20 sckkgfl 26 (48)
T d1ehsa_ 20 SCKKGFL 26 (48)
T ss_dssp HHHSCSS
T ss_pred HHhcccc
Confidence 4556654
No 6
>d2ghfa2 g.37.1.1 (A:9-44) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.76 E-value=45 Score=18.57 Aligned_cols=9 Identities=44% Similarity=1.265 Sum_probs=7.3
Q ss_pred hhhcccccc
Q 012441 451 KLSEGYKCR 459 (463)
Q Consensus 451 ~~~~~~~~~ 459 (463)
|+..||.|.
T Consensus 6 k~qGGyECK 14 (36)
T d2ghfa2 6 KVEGGYECK 14 (36)
T ss_dssp CCCSSEECS
T ss_pred cccCCeeee
Confidence 677899996
No 7
>d3dtub2 f.17.2.1 (B:30-129) Bacterial aa3 type cytochrome c oxidase subunit II {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=6.73 E-value=3.7e+02 Score=18.27 Aligned_cols=16 Identities=31% Similarity=0.808 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHH
Q 012441 90 KLLKVAWLTLPLGIFI 105 (463)
Q Consensus 90 ~~~~~~~~~~~~g~~~ 105 (463)
+.+...|..+|.-+++
T Consensus 69 ~~LEiiWTviP~lILi 84 (100)
T d3dtub2 69 SPLEIAWTIVPIVILV 84 (100)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 3577899777754433
No 8
>d2o39c1 g.18.1.1 (C:1-62) CD46 (membrane cofactor protein, MCP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.96 E-value=56 Score=20.70 Aligned_cols=7 Identities=71% Similarity=1.905 Sum_probs=3.7
Q ss_pred cccccCC
Q 012441 456 YKCRKGF 462 (463)
Q Consensus 456 ~~~~~~~ 462 (463)
|+|+.||
T Consensus 28 Y~C~~Gy 34 (62)
T d2o39c1 28 YKCKKGY 34 (62)
T ss_dssp EEECTTE
T ss_pred EEeCCCc
Confidence 5555554
No 9
>d1j2jb_ a.7.8.1 (B:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.52 E-value=2.9e+02 Score=15.81 Aligned_cols=25 Identities=16% Similarity=0.256 Sum_probs=15.9
Q ss_pred HHHHHhcCCCchhHHHHHHHHHHHH
Q 012441 296 TFARSASGQYPQKSKKIGNSLAEAL 320 (463)
Q Consensus 296 ~fs~l~~~~~~~~~~~~~~~~~~~~ 320 (463)
...++.+.+++++++.+++....++
T Consensus 10 lL~~LLkS~~PeDLqaANrLIK~mV 34 (41)
T d1j2jb_ 10 MLARLLKSSHPEDLRAANKLIKEMV 34 (41)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 3456666667777887766555443
No 10
>d1xoub_ a.231.1.2 (B:) EspA chaperone CesA {Escherichia coli [TaxId: 562]}
Probab=5.46 E-value=61 Score=21.16 Aligned_cols=6 Identities=83% Similarity=1.298 Sum_probs=2.4
Q ss_pred hhhccc
Q 012441 451 KLSEGY 456 (463)
Q Consensus 451 ~~~~~~ 456 (463)
|++|||
T Consensus 56 kliegy 61 (84)
T d1xoub_ 56 KLIEGY 61 (84)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 344443
Done!