BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012442
(463 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 204/433 (47%), Gaps = 40/433 (9%)
Query: 49 ISSSARIICEILAHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRG 108
++ A+ I ++L + ++SAL +G+ + ++V +VL ++ FF+W+ +
Sbjct: 68 VADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQ 127
Query: 109 QRL--SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEA 166
+ S A+++M++ K +++ MW+ + M++ +L++ TF + Y A K DEA
Sbjct: 128 RHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEA 187
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEG 226
+ +F+VM + + ++VA N LLSA+C+ +N +A E ++ PD +++ILLEG
Sbjct: 188 IYAFNVMEKYDLPPNLVAFNGLLSALCKSKN-VRKAQEVFENMRDRFTPDSKTYSILLEG 246
Query: 227 WEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 286
W KE N+ +A + F EM++ +P+ ++ Y + L + +VDEAL +R M C
Sbjct: 247 WGKEPNLPKAREVFREMIDA-GCHPD-IVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 287 PTLKFFS-------------NALDILVKLNDS----------------THAVQLWDIMMV 317
PT +S A+D +++ S A ++ ++ V
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 318 F-----HGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLD 372
G P+S + N+I LI+ E F +MIK +P I M +
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCE 423
Query: 373 ADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVT 432
E E A ++W Y+ + G+ P + + L+ GL EEM+ I VT
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
Query: 433 MHKLKKAFYNESR 445
+L++ E R
Sbjct: 484 FGRLRQLLIKEER 496
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 125/313 (39%), Gaps = 13/313 (4%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMS 174
A+N ++ L K+ + M++ T++ + + + +A F M
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 175 MHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKK----IVDPDGDSFAILLEGWEKE 230
G D+V + ++ +C+ R E L V+ I P +++L+ + E
Sbjct: 265 DAGCHPDIVTYSIMVDILCK----AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 231 GNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
+EEA TF EM ER + V + + + + ++ + L+ MK + P K
Sbjct: 321 NRLEEAVDTFLEM-ERSGMKAD-VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 378
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 350
+ L L++ + A ++ M+ PD+ TY M+ + + K + +K +
Sbjct: 379 SCNIILRHLIERGEKDEAFDVFRKMI--KVCEPDADTYTMVIKMFCEKKEMETADKVWKY 436
Query: 351 MIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGR 410
M K P+ + I L + + A + ++E GI P + L L R
Sbjct: 437 MRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Query: 411 LSDVRRFAEEMLN 423
DV +F E +N
Sbjct: 497 -EDVLKFLNEKMN 508
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 203/460 (44%), Gaps = 49/460 (10%)
Query: 42 THLDAPYISSSARIICEILAHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDF 101
T + A S A IC+IL + +E+ L + +P L+ EVL+ ++ A+
Sbjct: 55 TQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSV 114
Query: 102 FRWA--GRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCG 159
F+WA +G + + +N +++ LGK +F+ +W+ V MK +LS TFA I Y
Sbjct: 115 FKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYAR 174
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
A K EA+ +F M G + + N +L + + N F KK +PD S
Sbjct: 175 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 234
Query: 220 FAILLEGWEKEGN---VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF 276
+ ILLEGW +E N V+E N+ + E FE P+ V+AY + + K+ +EA++F
Sbjct: 235 YTILLEGWGQELNLLRVDEVNREMKD--EGFE--PD-VVAYGIIINAHCKAKKYEEAIRF 289
Query: 277 LRVMKGENCFPTLKFFS---NALDILVKLNDSTH---------------------AVQLW 312
M+ NC P+ F N L KLND+ W
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 313 DIM----------MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLN 362
M G P++ TY++I LI+ +R E + + M +PT
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVST 406
Query: 363 CATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEML 422
+ M + + ++AI+IW+ + G+LP + L+ L + +L + + EML
Sbjct: 407 YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Query: 423 NRRILIYEVTMHKLKKAFYNESR--SMRDIFDSLERRCKT 460
+ I +LK+ +E R + D+ ++R KT
Sbjct: 467 DVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRKT 506
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 200/444 (45%), Gaps = 43/444 (9%)
Query: 56 ICEILAH--ASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLS- 112
+C+++ A ++E+ L + + DL+ EVL+ + A FF WA Q +
Sbjct: 134 VCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAH 193
Query: 113 -PYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFD 171
+N M+ +L K +FE M + + M G+L++ TF ++ A + +AV F+
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 172 VMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEG 231
+M + + V +N LL ++ R + A +++K+ P+ ++ +LL GW +
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 312
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
N+ EA + + +M+++ P+ ++A+ L L+R ++ +A+K VMK + P ++
Sbjct: 313 NLIEAARIWNDMIDQ-GLKPD-IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 292 FSNALDILVKLNDSTHAVQLWDIM----------------------------------MV 317
++ + K + A++ +D M M
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 318 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPE 377
G PD TYN + + + K + +++MI+NE +P+ + A E
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYE 490
Query: 378 IAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLK 437
+ +W +++ GI P + S L+ GL G+ + R+ EEML++ + + +K
Sbjct: 491 MGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 438 KAFYNESRSMRDIFDSLERRCKTS 461
F+ + +IF+ L +R K S
Sbjct: 551 ADFHRGGQP--EIFEELAQRAKFS 572
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 200/444 (45%), Gaps = 43/444 (9%)
Query: 56 ICEILAH--ASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLS- 112
+C+++ A ++E+ L + + DL+ EVL+ + A FF WA Q +
Sbjct: 134 VCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAH 193
Query: 113 -PYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFD 171
+N M+ +L K +FE M + + M G+L++ TF ++ A + +AV F+
Sbjct: 194 ASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 172 VMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEG 231
+M + + V +N LL ++ R + A +++K+ P+ ++ +LL GW +
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 312
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
N+ EA + + +M++ P+ ++A+ L L+R + +A+K VMK + P ++
Sbjct: 313 NLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 292 FSNALDILVKLNDSTHAVQLWDIM----------------------------------MV 317
++ + K + A++ +D M M
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 318 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPE 377
G PD TYN + + + K + +++MI+NE +P+ + A E
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 490
Query: 378 IAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLK 437
+ +W+ +++ GI P + S L+ GL + G+ + R+ EEML++ + + +K
Sbjct: 491 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 550
Query: 438 KAFYNESRSMRDIFDSLERRCKTS 461
F+ + +IF+ L +R K S
Sbjct: 551 ADFHRGGQP--EIFEELAQRAKFS 572
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 200/444 (45%), Gaps = 43/444 (9%)
Query: 56 ICEILAH--ASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLS- 112
+C+++ A ++E+ L + + DL+ EVL+ + A FF WA Q +
Sbjct: 133 VCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAH 192
Query: 113 -PYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFD 171
+N M+ +L K +FE M + + M G+L++ TF ++ A + +AV F+
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 252
Query: 172 VMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEG 231
+M + + V +N LL ++ R + A +++K+ P+ ++ +LL GW +
Sbjct: 253 LMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVR 311
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
N+ EA + + +M++ P+ ++A+ L L+R + +A+K VMK + P ++
Sbjct: 312 NLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 292 FSNALDILVKLNDSTHAVQLWDIM----------------------------------MV 317
++ + K + A++ +D M M
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 318 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPE 377
G PD TYN + + + K + +++MI+NE +P+ + A E
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 378 IAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLK 437
+ +W+ +++ GI P + S L+ GL + G+ + R+ EEML++ + + +K
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFA 549
Query: 438 KAFYNESRSMRDIFDSLERRCKTS 461
F+ + +IF+ L +R K S
Sbjct: 550 ADFHRGGQP--EIFEELAQRAKFS 571
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 178/374 (47%), Gaps = 13/374 (3%)
Query: 58 EILAHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWA--GRGQRLSPYA 115
++ SSD+I C + + LVH++L D SA+ +WA +G + S A
Sbjct: 69 DVFKRLSSDEI-----CKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDA 123
Query: 116 WNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSM 175
+++ VD+LGK ++++M V M+ D +++L T A I + GAG+++EAV FD +
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 176 HGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEE 235
G+E++ ++N LL +C+ E + +A L ++K + P+ +F I + GW K VEE
Sbjct: 184 FGLEKNTESMNLLLDTLCK-EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 236 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 295
A T EM + + P V++Y T + + + + + L M+ P ++
Sbjct: 243 ALWTIQEM-KGHGFRP-CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 296 LDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFH-EMIKN 354
+ L + A+++ M G PDSL YN + L + R+ E E+ F EM +
Sbjct: 301 MSSLNAQKEFEEALRV-ATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL 359
Query: 355 EWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGIL-PLEASANELLVGLRNLGRLSD 413
+ I M DE + AIE+ + + + P + LL G + +
Sbjct: 360 GVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
Query: 414 VRRFAEEMLNRRIL 427
V + +EM+ + L
Sbjct: 420 VGKLLKEMVTKHHL 433
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 109/304 (35%), Gaps = 40/304 (13%)
Query: 98 AVDFFRWAGR-GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDS 156
AV F G G + + NL++D L K R EQ + +K + TF
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 157 YCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQ--------------------- 195
+C A + +EA+ + M HG V++ +++ C+Q
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 196 -------------ENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFG 241
+ + AL R+K+ PD + L+ + G +EEA + F
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVF- 352
Query: 242 EMVERFEWNPE-HVLAYETFLITLIRGKQVDEALKFLRVMKGEN-CFPTLKFFSNALDIL 299
VE E + Y + + + D+A++ L+ M+ N C P + + L
Sbjct: 353 -RVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 300 VKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPT 359
K D +L M+ H D TY + + L + F EMI + P
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Query: 360 PLNC 363
C
Sbjct: 472 HRTC 475
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 158/358 (44%), Gaps = 47/358 (13%)
Query: 56 ICEIL--AHASSDDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGR--GQRL 111
+C+ L S +D+ L+ ++ T LV +VL+ + + A FF WA G
Sbjct: 105 VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVH 164
Query: 112 SPYAWNLMVDVLGKNGRFEQMWNAVRVM---KEDGVLSLPTFASIFDSYCGAGKYDEAVM 168
S + +N MVDVLGK F+ MW V M +E +++L T + + +GKY++AV
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 169 SF-DVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEG- 226
+F ++ +GV+ D +A+NSL+ A+ + EN A E ++ + PD +F IL+ G
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVK-ENSIEHAHEVFLKLFDTIKPDARTFNILIHGF 283
Query: 227 ----------------------------------WEKEGNVEEANKTFGEMVERFEWNPE 252
+ KEG+ N+ EM E NP
Sbjct: 284 CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN-GCNP- 341
Query: 253 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLW 312
+V+ Y + +L + KQV EAL MK + C P KF+S+ + IL K A +++
Sbjct: 342 NVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIF 401
Query: 313 DIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITML 370
+ M G D L YN + + + R + M E + N T +L
Sbjct: 402 ED-MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 8/264 (3%)
Query: 98 AVDFFRWAGRGQ---RLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASI 153
++ FF WA SP+ +N M+D+ GK +F+ W+ + +MK V +S+ TF +
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 154 FDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIV 213
Y AG EAV F+ M +G D +A + ++S + R+ + S A F + +K
Sbjct: 193 IRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKR-RASEAQSFFDSLKDRF 251
Query: 214 DPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEA 273
+PD + L+ GW + G + EA K F EM + +V Y + L R Q+ A
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEM--KLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 274 LKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFE 333
M C P F+N + + VK + +Q+++ M G PD++TYN + E
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL-GCEPDTITYNFLIE 368
Query: 334 CLIKNKRVHEVEKFFHEMIKNEWQ 357
+++ + K + MIK + +
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCE 392
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +++++D L + G+ + + M + G + TF ++ + AG+ ++ + ++
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G E D + N L+ A CR EN A++ LN +KK + + +F + EK+
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCRDEN-LENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKR 409
Query: 232 NVEEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
+V A++ + +M+E + E N + Y + + K D LK + M + P +
Sbjct: 410 DVNGAHRMYSKMMEAKCEPN---TVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVN 466
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 350
+ + + + +A +L+ M+ P Y M+ L + ++ + E+ +
Sbjct: 467 TYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEK 526
Query: 351 MIKNEWQPTPL 361
MI+ PL
Sbjct: 527 MIQKGLVARPL 537
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 172/413 (41%), Gaps = 45/413 (10%)
Query: 66 DDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRL--SPYAWNLMVDVL 123
DD+E L + +LV +VL+ + A FF WA R S +++++V++L
Sbjct: 53 DDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEIL 112
Query: 124 GKNGRFEQMWNAVRVMKEDGVLSLPT--FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQD 181
G + +F +W+ + +E + + F +F +Y A EA +F+ M G++
Sbjct: 113 GSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPC 172
Query: 182 VVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTF 240
V ++ LL ++C + + A EF + K + P +++IL+ GW + + A K F
Sbjct: 173 VDDLDQLLHSLC-DKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVF 231
Query: 241 GEMVERFEWNPEHVLAYETFLITLIRGKQVD----------------------------- 271
EM+ER +LAY L L + VD
Sbjct: 232 DEMLERN--CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYC 289
Query: 272 ------EALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDS 325
A K L MK + P + F++ + L K A L D M+ GA PD+
Sbjct: 290 DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD-EMIQKGANPDT 348
Query: 326 LTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNY 385
TYN I + V+ K M + + P + +L+ + A EIW
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 386 ILENGILPLEASANELLVGL-RNLGRLSDVRRFAEEMLNRRILIYEVTMHKLK 437
+ E P A+ ++ GL R G+L + R+ E M++ I Y T+ L+
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLR 461
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 6/323 (1%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDE 165
RG +N++V+ + K GR ++ + M G ++ T I S C G++ +
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSFAILL 224
A M G VV N L++ +CR+ RA++ L ++ + P+ S+ LL
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRK-GLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
G+ KE ++ A + MV R + P+ ++ Y T L L + +V++A++ L + +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCY-PD-IVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 285 CFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEV 344
C P L ++ +D L K + A++L D M PD++TY+ + L + +V E
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA-KDLKPDTITYSSLVGGLSREGKVDEA 503
Query: 345 EKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVG 404
KFFHE + +P + + + L + + + AI+ +++ G P E S L+ G
Sbjct: 504 IKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Query: 405 LRNLGRLSDVRRFAEEMLNRRIL 427
L G + E+ N+ ++
Sbjct: 564 LAYEGMAKEALELLNELCNKGLM 586
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 153/355 (43%), Gaps = 42/355 (11%)
Query: 127 GRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAV 185
G+ + + +++ G + + T+ + YC AG+ + A+ D MS V DVV
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTY 207
Query: 186 NSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMV 244
N++L ++C + +A+E L+R +++ PD ++ IL+E ++ V A K EM
Sbjct: 208 NTILRSLC-DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 245 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL--------------- 289
+R P+ V+ Y + + + ++DEA+KFL M C P +
Sbjct: 267 DR-GCTPD-VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 290 -------------KFFSNAL---DILVK-LNDSTHAVQLWDIM--MVFHGAFPDSLTYNM 330
K FS ++ +IL+ L + DI+ M HG P+SL+YN
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 331 IFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENG 390
+ K K++ ++ M+ P + T +T L + E A+EI N + G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 391 ILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
P+ + N ++ GL G+ + +EM + + +T L E +
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 134/308 (43%), Gaps = 6/308 (1%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+N ++ L +G+ +Q + R+++ D + T+ + ++ C A+ D M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSFAILLEGWEKEGN 232
G DVV N L++ IC+ E + A++FLN + P+ + I+L G
Sbjct: 266 RDRGCTPDVVTYNVLVNGICK-EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 233 VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 292
+A K +M+ R ++P V+ + + L R + A+ L M C P +
Sbjct: 325 WMDAEKLLADML-RKGFSPS-VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 293 SNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 352
+ L K A++ + MV G +PD +TYN + L K+ +V + + +++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLE-RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 353 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLS 412
P + T I L A + AI++ + + + P + + L+ GL G++
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 413 DVRRFAEE 420
+ +F E
Sbjct: 502 EAIKFFHE 509
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 121/274 (44%), Gaps = 6/274 (2%)
Query: 151 ASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK 210
++ +C GK +A +++ G DV+ N ++S C+ + + AL L+R+
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA-GEINNALSVLDRMS 199
Query: 211 KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV 270
V PD ++ +L G +++A + M++R + P+ V+ Y + R V
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR-DCYPD-VITYTILIEATCRDSGV 255
Query: 271 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNM 330
A+K L M+ C P + ++ ++ + K A++ + M G P+ +T+N+
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND-MPSSGCQPNVITHNI 314
Query: 331 IFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENG 390
I + R + EK +M++ + P+ + I L AI+I + ++G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 391 ILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 424
P S N LL G ++ + E M++R
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 140/301 (46%), Gaps = 8/301 (2%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N +V+ L K G + + VM ++G + T+ S+ C G+ EAV D
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV--KKIVDPDGDSFAILLEGWEKE 230
M + V N+L+S +C+ ENQ A E L RV K + PD +F L++G
Sbjct: 356 MITRDCSPNTVTYNTLISTLCK-ENQVEEATE-LARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 231 GNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
N A + F EM + P+ Y + +L ++DEAL L+ M+ C ++
Sbjct: 414 RNHRVAMELFEEMRSK-GCEPDE-FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 350
++ +D K N + A +++D M V HG +S+TYN + + L K++RV + + +
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEV-HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 351 MIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGR 410
MI +P + +T + + A +I + NG P + L+ GL GR
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 411 L 411
+
Sbjct: 591 V 591
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 150/331 (45%), Gaps = 11/331 (3%)
Query: 67 DIESALACTGIIPTPDLVHEVLQ---LSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVL 123
++ L GI+P + ++Q L+ + + F +G + +N+++D L
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 445
Query: 124 GKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDV 182
G+ ++ N ++ M+ G S+ T+ ++ D +C A K EA FD M +HGV ++
Sbjct: 446 CSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 183 VAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGE 242
V N+L+ +C+ A + + PD ++ LL + + G++++A
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 243 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV--MKGENCFPTLKFFSNALDILV 300
M P+ ++ Y T + L + +V+ A K LR MKG N P ++ + L
Sbjct: 566 MTSN-GCEPD-IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP--HAYNPVIQGLF 621
Query: 301 KLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKR-VHEVEKFFHEMIKNEWQPT 359
+ +T A+ L+ M+ + A PD+++Y ++F L + E F E+++ + P
Sbjct: 622 RKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
Query: 360 PLNCATAITMLLDADEPEIAIEIWNYILENG 390
+ LL E +++ N +++
Sbjct: 682 FSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 148/351 (42%), Gaps = 45/351 (12%)
Query: 96 SSAVDFFRWAGRGQRLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFAS 152
S+A+ F A + SP + ++ LG++G F+ M + MK + TF
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 153 IFDSYCGAGKYDEAV------------------------------------MSFDVMSMH 176
+ +SY DE + +S MS+
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 177 GVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEA 236
G++ DV N L+ A+CR L + + PD +F +++G+ +EG+++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 237 NKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF-PTLKFFSN 294
+ +MVE W+ ++ + + +V++AL F++ M ++ F P F+
Sbjct: 244 LRIREQMVEFGCSWSN---VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300
Query: 295 ALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKN 354
++ L K HA+++ D+M+ G PD TYN + L K V E + +MI
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQ-EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 355 EWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGL 405
+ P + T I+ L ++ E A E+ + GILP + N L+ GL
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 134/317 (42%), Gaps = 40/317 (12%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMK-EDGVL-SLPTFASIFDSYCGAGKYDE 165
G S + N++V K GR E N ++ M +DG TF ++ + C AG
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLE 225
A+ DVM G + DV NS++S +C
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLC-------------------------------- 341
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
K G V+EA + +M+ R + +P V Y T + TL + QV+EA + RV+ +
Sbjct: 342 ---KLGEVKEAVEVLDQMITR-DCSPNTV-TYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVE 345
P + F++ + L + A++L++ M G PD TYNM+ + L ++ E
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 346 KFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGL 405
+M + + + T I A++ A EI++ + +G+ + N L+ GL
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 406 RNLGRLSDVRRFAEEML 422
R+ D + ++M+
Sbjct: 516 CKSRRVEDAAQLMDQMI 532
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 17/303 (5%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+N ++ L K + E+ RV+ G+L + TF S+ C + A+ F+ M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV------KKIVDPDGDSFAILLEGW 227
G E D N L+ ++C + + AL L ++ + ++ ++ L++G+
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSK-GKLDEALNMLKQMELSGCARSVI-----TYNTLIDGF 480
Query: 228 EKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFP 287
K EA + F EM + + Y T + L + ++V++A + + M E P
Sbjct: 481 CKANKTREAEEIFDEM--EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 288 TLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKF 347
+++ L + D A + M +G PD +TY + L K RV K
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQ-AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 348 FHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLV-GLR 406
+ TP I L + AI ++ +LE P +A + ++ GL
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Query: 407 NLG 409
N G
Sbjct: 658 NGG 660
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 38/238 (15%)
Query: 223 LLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 282
LL+ + + A + F ++ ++PE L YE L+ L R D+ K L MK
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPAL-YEEILLRLGRSGSFDDMKKILEDMKS 111
Query: 283 ENC------------------------------------FPTLKFFSNALDILVKLNDST 306
C P F++ L++LV N S
Sbjct: 112 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN-SL 170
Query: 307 HAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATA 366
V++ M G PD T+N++ + L + ++ +M P T
Sbjct: 171 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 367 ITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 424
+ ++ + + A+ I ++E G S N ++ G GR+ D F +EM N+
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 8/318 (2%)
Query: 80 TPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPY---AWNLMVDVLGKNGRFEQMWNAV 136
TP+LV+ VL+ ++ A+ FF + R + +++L +D+ + +W+ +
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 137 RVMKEDGVLSLP-TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQ 195
M+ + P TFA + + Y AGK D+AV F M HG QD+ + N++L +C+
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 196 ENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVL 255
+ + +A E ++ D ++ ++L GW +A + EMVER NP ++
Sbjct: 175 K-RVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER-GINP-NLT 231
Query: 256 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM 315
Y T L R Q+ A +F MK +C + ++ + + A ++D
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFD-E 290
Query: 316 MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADE 375
M+ G P TYN + + L K V F EM++ ++P I L A E
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 376 PEIAIEIWNYILENGILP 393
E+ + G P
Sbjct: 351 FSRGEELMQRMENEGCEP 368
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 9/235 (3%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE-DGVLSLPTFASIFDSYCGAGKYDE 165
RG + +N M+ + G+ W MK+ D + + T+ ++ + AG+
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLE 225
A FD M GV V N+++ +C+++N + + F V++ +P+ ++ +L+
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 226 GWEKEGNVEEANKTFGEMVERF--EWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 283
G G E+++R E + Y + +V++AL M
Sbjct: 344 GLFHAGEFSRGE----ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 284 NCFPTLKFFSNALDILVKLNDSTHAVQLWDIM--MVFHGAFPDSLTYNMIFECLI 336
+C P L ++ + + S V ++ MV G P T+N + L+
Sbjct: 400 DCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLL 454
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Query: 205 FLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLIT 263
++R++ + + P +FAI+ E + G ++A K F M E + + + ++ T L
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCF--QDLASFNTILDV 170
Query: 264 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFP 323
L + K+V++A + R ++G T+ + + L+ + + A+++ MV G P
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTVTY-NVILNGWCLIKRTPKALEVLK-EMVERGINP 228
Query: 324 DSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIW 383
+ TYN + + + ++ +FF EM K + + + T + A E + A ++
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 384 NYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 424
+ ++ G+LP A+ N ++ L + + EEM+ R
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 8/174 (4%)
Query: 287 PTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEK 346
P+ K F+ + AV+L+ + M HG F D ++N I + L K+KRV + +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 182
Query: 347 FFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLR 406
F + + + + + A+E+ ++E GI P + N +L G
Sbjct: 183 LFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 407 NLGRLSDVRRFAEEMLNR----RILIYEVTMHKLKKAFYNESRSMRDIFDSLER 456
G++ F EM R ++ Y +H A E + R++FD + R
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA--GEIKRARNVFDEMIR 293
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 136/281 (48%), Gaps = 5/281 (1%)
Query: 147 LPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFL 206
L T +++ + C G+ EA++ D M +G + D V +L+ +C+ N ++ AL+
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN-SALALDLF 233
Query: 207 NRVK-KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLI 265
+++ + + ++I+++ K+G+ ++A F EM + V+ Y + + L
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM--EMKGIKADVVTYSSLIGGLC 291
Query: 266 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDS 325
+ D+ K LR M G N P + FS +D+ VK A +L++ M+ G PD+
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN-EMITRGIAPDT 350
Query: 326 LTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNY 385
+TYN + + K +HE + F M+ +P + + I A + + ++
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 386 ILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI 426
I G++P + N L++G G+L+ + +EM++R +
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 139/297 (46%), Gaps = 14/297 (4%)
Query: 123 LGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQD 181
L K+G + R M+E + S+ ++ + DS C G +D+A+ F+ M M G++ D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 182 VVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFG 241
VV +SL+ +C A + + + PD +F+ L++ + KEG + EA + +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 242 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 301
EM+ R P+ + Y + + + + EA + +M + C P + +S +
Sbjct: 340 EMITR-GIAPDTI-TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS------IL 391
Query: 302 LNDSTHAVQLWDIMMVFH-----GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEW 356
+N A ++ D M +F G P+++TYN + ++ +++ ++ F EM+
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 357 QPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSD 413
P+ + + L D E A+EI+ + ++ + N ++ G+ N ++ D
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 18/260 (6%)
Query: 108 GQRLSP--YAWNLMVDVLGKNGRF---EQMWNAV--RVMKEDGVLSLPTFASIFDSYCGA 160
G+ + P ++ ++DV K G+ ++++N + R + D + T+ S+ D +C
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI----TYNSLIDGFCKE 363
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSF 220
EA FD+M G E D+V + L+++ C+ + F K + P+ ++
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
L+ G+ + G + A + F EMV R P V+ Y L L ++++AL+ M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSR--GVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVF--HGAFPDSLTYNMIFECLIKN 338
+ + ++ I+ + +++ W + G PD +TYN++ L K
Sbjct: 482 QKSRMTLGIGIYNI---IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 339 KRVHEVEKFFHEMIKNEWQP 358
+ E + F +M ++ P
Sbjct: 539 GSLSEADMLFRKMKEDGCTP 558
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 126/296 (42%), Gaps = 9/296 (3%)
Query: 154 FDSYCGA----GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
F+ C A +YD + M ++G+E D+ + +++ CR++ + A L R
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKK-KLLFAFSVLGRA 131
Query: 210 KKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
K+ +PD +F+ L+ G+ EG V EA MVE + P+ V T + L
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE-MKQRPDLV-TVSTLINGLCLKG 189
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTY 328
+V EAL + M P + L+ L K +S A+ L+ M + Y
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR-KMEERNIKASVVQY 248
Query: 329 NMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILE 388
+++ + L K+ + F+EM + + ++ I L + + + ++ ++
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 389 NGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNES 444
I+P + + L+ G+L + + EM+ R I +T + L F E+
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 72 LACTGIIPTPDLVHEVLQLSY---DSPSSAVDFFR-WAGRGQRLSPYAWNLMVDVLGKNG 127
++ G+IP + + L L + ++A + F+ RG S + +++D L NG
Sbjct: 411 ISSKGLIPNT-ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 128 RFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVN 186
+ M++ + L + + I C A K D+A F +S GV+ DVV N
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 187 SLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILL 224
++ +C++ + + + F + PD ++ IL+
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Query: 81 PDLV-HEVLQLSYDSPSSAVDFFRW----AGRGQRLSPYAWNLMVDVLGKNGRFEQMWNA 135
PD+V + +L SY D R + +G + +N +V ++G+
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 136 VRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICR 194
+ M GV S+ T+ + D C G+ ++A+ F+ M + + N ++ +C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 195 QENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVE 245
F + K V PD ++ +++ G K+G++ EA+ F +M E
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
++N++++ L + GR +++ + M G L T+ ++ YC G + +A++ M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILLEGWEKEGN 232
HG+ V+ SL+ ++C+ N +RA+EFL++++ + + P+ ++ L++G+ ++G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNM-NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 233 VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 292
+ EA + EM + ++P V+ Y + ++++A+ L MK + P + +
Sbjct: 396 MNEAYRVLREMNDN-GFSPS-VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 293 SNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 352
S L + D A+++ MV G PD++TY+ + + + +R E + EM+
Sbjct: 454 STVLSGFCRSYDVDEALRVKR-EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 353 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLS 412
+ P I + E A+++ N ++E G+LP + + L+ GL R
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 413 DVRRFAEEMLNRRILIYEVTMHKL 436
+ +R ++ + +VT H L
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTL 596
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 163/376 (43%), Gaps = 43/376 (11%)
Query: 110 RLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
++SP + +N+++ G + M+ G L ++ T+ ++ D YC K D+
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQE--NQTSRALEFLNRVKKIVDPDGDSFAILL 224
M++ G+E ++++ N +++ +CR+ + S L +NR + D ++ L+
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR--RGYSLDEVTYNTLI 317
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
+G+ KEGN +A EM+ R P V+ Y + + ++ + ++ A++FL M+
Sbjct: 318 KGYCKEGNFHQALVMHAEML-RHGLTPS-VITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 285 CFPTLKFFSNALD-------------ILVKLND--------------STHAV--QLWDIM 315
P + ++ +D +L ++ND + H V ++ D +
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 316 MVFH-----GAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITML 370
V G PD ++Y+ + ++ V E + EM++ +P + ++ I
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 371 LDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYE 430
+ + A +++ +L G+ P E + L+ G L + EM+ + +L
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 431 VTMHKLKKAFYNESRS 446
VT L +SR+
Sbjct: 556 VTYSVLINGLNKQSRT 571
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 146/364 (40%), Gaps = 26/364 (7%)
Query: 80 TPDLVHEVLQLSYDSPSSAVDFFRWAGRGQ-----------------RLSPYAWNLMVDV 122
TP+ +L S + + + F WA Q +L A L DV
Sbjct: 47 TPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDV 106
Query: 123 LGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFD----SYCGAGKYDEAVMSFDVMSMHGV 178
K E + ++E L T +S+FD SY D+A+ + HG
Sbjct: 107 AAKTLDDEYASLVFKSLQETYDLCYST-SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF 165
Query: 179 EQDVVAVNSLLSAICRQENQTSRALE-FLNRVKKIVDPDGDSFAILLEGWEKEGNVEEAN 237
V++ N++L A R + S A F ++ V P+ ++ IL+ G+ GN++ A
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVAL 225
Query: 238 KTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALD 297
F +M E P +V+ Y T + + +++D+ K LR M + P L ++ ++
Sbjct: 226 TLFDKM-ETKGCLP-NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 298 ILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQ 357
L + V M G D +TYN + + K H+ EM+++
Sbjct: 284 GLCR-EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 358 PTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRF 417
P+ + + I + A A+E + + G+ P E + L+ G G +++ R
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 418 AEEM 421
EM
Sbjct: 403 LREM 406
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 319 HGAFPDSLTYNMIFECLIKNKR-VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPE 377
HG P L+YN + + I++KR + E F EM++++ P I A +
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 378 IAIEIWNYILENGILPLEASANELLVGLRNLGRLSD----VRRFAEEMLNRRILIYEVTM 433
+A+ +++ + G LP + N L+ G L ++ D +R A + L ++ Y V +
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 434 HKL 436
+ L
Sbjct: 283 NGL 285
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 143/307 (46%), Gaps = 12/307 (3%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAG 161
R G + + + ++ V+ K+G+ +R M+E + L ++ I D C G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFA 221
D A F+ M + G + D++ +L+ C A + +K+ + PD +F+
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
L++ + KEG + EA + EM++R +P+ V Y + + + Q+D+A L +M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQR-GISPDTV-TYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRV 341
+ C P ++ F+ ++ K N ++L+ M G D++TYN + + + ++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFR-KMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 342 HEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANEL 401
++ F EM+ +P ++ + L D EPE A+EI+ I E S EL
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI--------EKSKMEL 490
Query: 402 LVGLRNL 408
+G+ N+
Sbjct: 491 DIGIYNI 497
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 157/349 (44%), Gaps = 14/349 (4%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDG-VLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
++ +++ L GR + V M E G +L T ++ + C GK +AV+ D M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILLEGWEKEGN 232
G + + V +L +C+ QT+ A+E L +++ + + D ++I+++G K+G+
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKS-GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 233 VEEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
++ A F EM ++ F+ + ++ Y T + + D+ K LR M P +
Sbjct: 263 LDNAFNLFNEMEIKGFKAD---IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 292 FSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 351
FS +D VK A +L M+ G PD++TY + + K ++ + M
Sbjct: 320 FSALIDCFVKEGKLREAEELHK-EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 352 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 411
+ P I A+ + +E++ + G++ + N L+ G LG+L
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 412 SDVRRFAEEMLNRR----ILIYEVTMHKLKKAFYNESRSMRDIFDSLER 456
+ +EM++RR I+ Y++ + L E +IF+ +E+
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGL--CDNGEPEKALEIFEKIEK 485
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 139/309 (44%), Gaps = 13/309 (4%)
Query: 109 QRLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDE 165
++++P A++ ++D K G+ + + M + G+ T+ S+ D +C + D+
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILL 224
A D+M G ++ N L++ C+ N LE ++ + V D ++ L+
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKA-NLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
+G+ + G +E A + F EMV R P+ +++Y+ L L + ++AL+ ++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSR-RVRPD-IVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 285 CFPTLKFFSNALDILVKLNDSTHAVQLWDIM--MVFHGAFPDSLTYNMIFECLIKNKRVH 342
+ ++ I+ + +++ WD+ + G PD TYN++ L K +
Sbjct: 488 MELDIGIYNI---IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 343 EVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELL 402
E + F +M ++ P I L + + ++ I G ++AS +++
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG-FSVDASTVKMV 603
Query: 403 VGLRNLGRL 411
V + + GRL
Sbjct: 604 VDMLSDGRL 612
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 128/309 (41%), Gaps = 23/309 (7%)
Query: 147 LPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFL 206
L F+ +F +YD + M + G+ ++ ++ +++ CR + S A +
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR-KLSLAFSAM 130
Query: 207 NRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL- 264
++ K+ +PD +F+ L+ G EG V EA + MVE + ++ LITL
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE---------MGHKPTLITLN 181
Query: 265 -------IRGKQVDEALKFLRVMKGENCF-PTLKFFSNALDILVKLNDSTHAVQLWDIMM 316
+ GK D L R++ E F P + L ++ K + A++L M
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMV--ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 317 VFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEP 376
D++ Y++I + L K+ + F+EM ++ + T I A
Sbjct: 240 ERKIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 377 EIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKL 436
+ ++ +++ I P + + L+ G+L + +EM+ R I VT L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 437 KKAFYNESR 445
F E++
Sbjct: 359 IDGFCKENQ 367
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCG 159
F + + RG +N ++ + G+ E + M V + ++ + D C
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
G+ ++A+ F+ + +E D+ N ++ +C F + K V PD +
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 220 FAILLEGWEKEGNVEEANKTFGEMVE 245
+ I++ G K+G++ EA+ F +M E
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 1/162 (0%)
Query: 271 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNM 330
D+A+ + M P L FS ++ + + L M G + T ++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK-QMELKGIAHNLYTLSI 112
Query: 331 IFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENG 390
+ C + +++ ++IK ++P + +T I L A+E+ + ++E G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 391 ILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVT 432
P + N L+ GL G++SD + M+ EVT
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 144/304 (47%), Gaps = 12/304 (3%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAG 161
R G + + + +++V+ K+G+ +R M+E + L ++ I D C G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFA 221
D A F+ M + G + D++ N+L+ C A + +K+ + P+ +F+
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
+L++ + KEG + EA++ EM++R + + Y + + + +++EA++ + +M
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRV 341
+ C P + F+ ++ K N ++L+ M G +++TYN + + ++ ++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFR-EMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 342 HEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANEL 401
+K F EM+ +P ++ + L D E E A+EI+ I E S EL
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI--------EKSKMEL 506
Query: 402 LVGL 405
+G+
Sbjct: 507 DIGI 510
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 134/283 (47%), Gaps = 7/283 (2%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
+L T ++ + C GK +AV+ D M G + + V +L+ +C+ QT+ A+E
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS-GQTALAMEL 250
Query: 206 LNRVK-KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEM-VERFEWNPEHVLAYETFLIT 263
L +++ + + D ++I+++G K+G+++ A F EM ++ F+ + ++ Y T +
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD---IITYNTLIGG 307
Query: 264 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFP 323
+ D+ K LR M P + FS +D VK A QL MM G P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ-RGIAP 366
Query: 324 DSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIW 383
+++TYN + + K R+ E + MI P + I A+ + +E++
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 384 NYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI 426
+ G++ + N L+ G G+L ++ +EM++RR+
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 7/330 (2%)
Query: 98 AVDFFRWAGRGQRL-SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFD 155
AVD FR + + L + +N + + K ++E + + M+ G+ S+ T + + +
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 156 SYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIV-D 214
+C K A + + G E D V N+LL+ +C E + S ALE ++R+ ++
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC-LECRVSEALELVDRMVEMGHK 190
Query: 215 PDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL 274
P + L+ G G V +A MVE + P V Y L + + Q A+
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVET-GFQPNEV-TYGPVLNVMCKSGQTALAM 248
Query: 275 KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFEC 334
+ LR M+ N +S +D L K +A L++ M + G D +TYN +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKADIITYNTLIGG 307
Query: 335 LIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPL 394
R + K +MIK + P + + I + + A ++ +++ GI P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 395 EASANELLVGLRNLGRLSDVRRFAEEMLNR 424
+ N L+ G RL + + + M+++
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 11/273 (4%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDE 165
RG + +N ++D K R E+ V +M G + TF + + YC A + D+
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLE 225
+ F MS+ GV + V N+L+ C+ F V + V PD S+ ILL+
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
G G +E+A + FG+ +E+ + + + Y + + +VD+A +
Sbjct: 482 GLCDNGELEKALEIFGK-IEKSKMELD-IGIYMIIIHGMCNASKVDDAWDLFCSLP---- 535
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIM---MVFHGAFPDSLTYNMIFECLIKNKRVH 342
+K + A +I++ ++ DI+ M G PD LTYN++ + +
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 343 EVEKFFHEMIKNEWQPTPLNCATAITMLLDADE 375
+ EM K+ P ++ + +L + E
Sbjct: 596 TAAELIEEM-KSSGFPADVSTVKMVINMLSSGE 627
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCG 159
F R R ++ +++D L NG E+ ++ K L + + I C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
A K D+A F + + GV+ D A N ++S +CR+++ + + F ++ PD +
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 220 FAILLEGWEKEGNVEEANKTFGEM 243
+ IL+ + + A + EM
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEM 604
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 168/374 (44%), Gaps = 20/374 (5%)
Query: 49 ISSSARIICEILAHASSD--DIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAG 106
+S I +++ SD ++ + L + P+ +LV E+L + +A FF WAG
Sbjct: 93 VSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAG 152
Query: 107 RGQRL--SPYAWNLMVDVLGKNGRFEQMWNAVRVMKE--DGVLSLPTFASIFDSYCGAGK 162
+ Q S ++ M+ +LGK +F+ W + M++ +++ T + YC
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 163 YDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRA-LEFLNRVKKIVDPDGDSFA 221
+A+ +F +E + SLLSA+CR +N + L F N+ K D SF
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFD--AKSFN 270
Query: 222 ILLEGWEKE-GNVEEANKTFGEMVERFEWNPEH-VLAYETFLITLIRGKQVDEALKFLRV 279
I+L GW G+ EA + + EM +H V++Y + + +G +++ LK
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNV---GVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 280 MKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNK 339
MK E P K ++ + L K + + A L M G P+ +TYN + + L K +
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 340 RVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASAN 399
+ E ++ F EM++ PT + A +L E E++ + + + E +
Sbjct: 388 KTEEAKQVFDEMLEKGLFPT-IRTYHAFMRILRTGE-----EVFELLAKMRKMGCEPTVE 441
Query: 400 ELLVGLRNLGRLSD 413
++ +R L R D
Sbjct: 442 TYIMLIRKLCRWRD 455
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 11/245 (4%)
Query: 117 NLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSM 175
N +V+G E++W M GV + +++S+ Y G ++ + FD M
Sbjct: 274 NGWCNVIGSPREAERVWME---MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 176 HGVEQDVVAVNSLLSAICRQENQT-SRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVE 234
+E D N+++ A+ + + +R L +K ++P+ ++ L++ K E
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 235 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 294
EA + F EM+E+ + + Y F+ L G++V E L +R M C PT++ +
Sbjct: 391 EAKQVFDEMLEKGLFPT--IRTYHAFMRILRTGEEVFELLAKMRKM---GCEPTVETYIM 445
Query: 295 ALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKN 354
+ L + D + + LWD M PD +Y ++ L N ++ E ++ EM
Sbjct: 446 LIRKLCRWRDFDNVLLLWDEMKE-KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK 504
Query: 355 EWQPT 359
+P
Sbjct: 505 GMRPN 509
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 37/192 (19%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL--SLPTFASIFDSYCGAGKYDEAVMSFDV 172
+N +V L K + N ++ M+E+ + ++ T+ S+ C A K +EA FD
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 173 M----------SMH----------------------GVEQDVVAVNSLLSAICRQENQTS 200
M + H G E V L+ +CR + +
Sbjct: 399 MLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDN 458
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF 260
L + +K V PD S+ +++ G G +EEA + EM ++ E+V E
Sbjct: 459 VLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV---EDM 515
Query: 261 LITLIRGKQVDE 272
+ + GKQ E
Sbjct: 516 IQSWFSGKQYAE 527
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 181/449 (40%), Gaps = 71/449 (15%)
Query: 66 DDIESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLS--PYAWNLMVDVL 123
DD+E AL + + T +V ++LQ +A FF WAG + S P A+N M+D+L
Sbjct: 110 DDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDIL 169
Query: 124 G----KNGRFEQMWNAVRVMKEDG--VLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHG 177
KN +F + + + MK + V+ + I YC +Y V F
Sbjct: 170 SSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYC--ERYLTHVQKFAKRKRIR 227
Query: 178 VEQ--DVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEE 235
V+ ++ A N LL A+C+ L R++ V PD ++F +L GW + + ++
Sbjct: 228 VKTQPEINAFNMLLDALCKC-GLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKK 286
Query: 236 ANKTFGEMVERFEWNPE---HVLAYETF-------------------------------- 260
A K EM+E PE + A +TF
Sbjct: 287 AMKLLEEMIEA-GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 261 --LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVF 318
++ L + + +E + + M C P + + + ++ + A + D M
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD-EMSN 404
Query: 319 HGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEI 378
G PD +TYN L +N++ E K + M+++ P+ I+M + D+P+
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 379 AIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI-LIYEV------ 431
A W + + + + ++ GL + R + EE++N+ + L Y V
Sbjct: 465 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLM 524
Query: 432 ---------TMHKLK---KAFYNESRSMR 448
+HK+ K FYN S + R
Sbjct: 525 RLSEVGNLKAIHKVSEHMKKFYNHSMARR 553
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 142/302 (47%), Gaps = 12/302 (3%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEA 166
G + + + +++V+ K+G+ +R M+E + L ++ I D C G D A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEG 226
F+ M M G+ +++ N L+ C A + +K+ ++P+ +F++L++
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 227 WEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 286
+ KEG + EA + EM+ R P+ + Y + + + +D+A + + +M + C
Sbjct: 343 FVKEGKLREAEELHKEMIHR-GIAPDTI-TYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 287 PTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEK 346
P ++ F+ ++ K N ++L+ M G D++TYN + + + +++ ++
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFR-KMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 347 FFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLR 406
F EM+ + P + + L D E E A+EI+ I E S EL +G+
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI--------EKSKMELDIGIY 511
Query: 407 NL 408
N+
Sbjct: 512 NI 513
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 156/348 (44%), Gaps = 12/348 (3%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDG-VLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
++ +++ L GR + V M E G L T ++ + C +GK EA++ D M
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILLEGWEKEGN 232
+G + + V +L+ +C+ QT+ A+E L +++ + + D ++I+++G K G+
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKS-GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 233 VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 292
++ A F EM + +++ Y + + D+ K LR M P + F
Sbjct: 279 LDNAFNLFNEM--EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 293 SNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 352
S +D VK A +L M+ G PD++TY + + K + + + M+
Sbjct: 337 SVLIDSFVKEGKLREAEELHK-EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 353 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLS 412
P I A+ + +E++ + G++ + N L+ G LG+L+
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 413 DVRRFAEEMLNRR----ILIYEVTMHKLKKAFYNESRSMRDIFDSLER 456
+ +EM++R+ I+ Y++ + L ES +IF+ +E+
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGL--CDNGESEKALEIFEKIEK 501
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 127/302 (42%), Gaps = 8/302 (2%)
Query: 147 LPT---FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRAL 203
LPT F+ +F + +YD + M + G+ ++ ++ +++ CR + A
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCR-KLCLAF 143
Query: 204 EFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLI 262
+ ++ K+ +P+ +F+ L+ G EG V EA + MVE P+ ++ T +
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE-MGHKPD-LITINTLVN 201
Query: 263 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAF 322
L + EA+ + M C P + L+++ K + A++L M +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 323 PDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEI 382
D++ Y++I + L K+ + F+EM + I +A + ++
Sbjct: 262 -DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 383 WNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYN 442
+++ I P + + L+ G+L + +EM++R I +T L F
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCK 380
Query: 443 ES 444
E+
Sbjct: 381 EN 382
Score = 38.9 bits (89), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+ +++D L NG E+ ++ K L + + I C A K D+A F +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNV 233
+ GV+ V N ++ +C++ + L F + PDG ++ IL+ +G+
Sbjct: 535 PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Query: 234 EEANKTFGEM 243
++ K E+
Sbjct: 595 TKSVKLIEEL 604
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 93 DSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLS-LPTFA 151
D + VD +G + +N++++ K R + R M GV++ T+
Sbjct: 385 DKANQMVDLM--VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 152 SIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKK 211
++ +C GK + A F M V ++V LL +C ++ +ALE +++K
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC-DNGESEKALEIFEKIEK 501
Query: 212 I-VDPDGDSFAILLEGWEKEGNVEEA 236
++ D + I++ G V++A
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDA 527
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 148/328 (45%), Gaps = 24/328 (7%)
Query: 130 EQMWNAVRVMKEDGVL-------------SLPTFASIFDSYCGAGKYDEAVMSFDVMSMH 176
E + N +R MK D L S+ F+ + + KYD + ++ M M
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 177 GVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIV-DPDGDSFAILLEGWEKEGNVEE 235
G+ ++ N LL+ CR +Q S AL FL ++ K+ +P +F LL G+ + V +
Sbjct: 111 GIPHNLCTCNILLNCFCRC-SQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD 169
Query: 236 ANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 295
A F +MV + P +V+ Y T + L + KQVD AL L M+ + P + +++
Sbjct: 170 ALYMFDQMVG-MGYKP-NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 296 LDILV---KLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 352
+ L + +D+T V M +PD T+N + + +K RV E E+F+ EMI
Sbjct: 228 ISGLCSSGRWSDATRMVSC----MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 353 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLS 412
+ P + + I L + A E++ +++ G P + + L+ G ++
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 413 DVRRFAEEMLNRRILIYEVTMHKLKKAF 440
+ EM R ++ VT L + +
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 150/326 (46%), Gaps = 10/326 (3%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCG 159
F + G G + + +N ++D L K+ + + + + M++DG+ + T+ S+ C
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGD 218
+G++ +A M+ + DV N+L+ A C +E + S A EF +++ +DPD
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDA-CVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
++++L+ G ++EA + FG MV + + P+ V+ Y + + K+V+ +K
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF-PD-VVTYSILINGYCKSKKVEHGMKLFC 350
Query: 279 VMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKN 338
M ++ + + A +++ MVF G P+ +TYN++ L N
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR-RMVFCGVHPNIITYNVLLHGLCDN 409
Query: 339 KRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASA 398
++ + +M KN + I + A E A +I+ + G++P +
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 399 NELLVGLRNLGRLSDVRRFAEEMLNR 424
+++GL G +RR A+ + +
Sbjct: 470 TTMMLGLYKKG----LRREADALFRK 491
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 185/426 (43%), Gaps = 44/426 (10%)
Query: 39 RFPTHLDAPYISSSARIICEILAH---ASSDDIESALACTGIIPTPDLVHEVLQLSYD-- 93
+FP + SA + I+ H +S + I+ L GI T +LV EV+ +
Sbjct: 64 KFPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDW 123
Query: 94 SPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFAS 152
P+ + S +N ++DVLGK RFE+ M K DG ++ T+
Sbjct: 124 KPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEV 183
Query: 153 IFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI 212
+ + Y A K DEAV F+ G++ D+VA + LL +CR ++ F +R ++
Sbjct: 184 LLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREF 243
Query: 213 VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDE 272
D + ++L GW GNV EA + + +++ + P+ V++Y T + L + ++ +
Sbjct: 244 -GCDIKAMNMILNGWCVLGNVHEAKRFWKDIIAS-KCRPD-VVSYGTMINALTKKGKLGK 300
Query: 273 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIF 332
A++ R M P +K +N +D L A++++ + G P+ +TYN +
Sbjct: 301 AMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFR-EISEKGPDPNVVTYNSLL 359
Query: 333 ECLIKNKRVHEVEKFFHE----------------------------------MIKNEWQP 358
+ L K +R +V + E M KN+ +
Sbjct: 360 KHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEM 419
Query: 359 TPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFA 418
T + + D+ E EIW+ + +G+ P + + + GL G++ + +
Sbjct: 420 TSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYF 479
Query: 419 EEMLNR 424
+EM+++
Sbjct: 480 QEMMSK 485
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 149/315 (47%), Gaps = 10/315 (3%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMK----EDGVLSLPTFASIFDSYC 158
R +G + + ++V+ L K G + +N + M+ E GVL + +I D C
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL---IYNTIIDGLC 267
Query: 159 GAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGD 218
D+A+ F M G+ +VV +SL+S +C + + + +++ ++PD
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
+F+ L++ + KEG + EA K + EMV+R +P ++ Y + + ++DEA +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPS-IVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 279 VMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKN 338
M ++CFP + ++ + K ++++ M G +++TYN++ + L +
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYNILIQGLFQA 444
Query: 339 KRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASA 398
++ F EM+ + P + T + L + E A+ ++ Y+ + + P +
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 399 NELLVGLRNLGRLSD 413
N ++ G+ G++ D
Sbjct: 505 NIMIEGMCKAGKVED 519
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 153/330 (46%), Gaps = 6/330 (1%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y ++++++ + + + ++MK ++ T +S+ + YC + + EAV D
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M + G + + V N+L+ + N+ S A+ ++R V K PD ++ +++ G K G
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
+ + A +M E+ + P VL Y T + L + K +D+AL + M+ + P +
Sbjct: 236 DTDLAFNLLNKM-EQGKLEP-GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 292 FSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 351
+S+ + L + A +L M + PD T++ + + +K ++ E EK + EM
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 352 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 411
+K P+ + ++ I D + A +++ +++ P + N L+ G R+
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 412 SDVRRFAEEMLNRRILIYEVTMHKLKKAFY 441
+ EM R ++ VT + L + +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 142/331 (42%), Gaps = 23/331 (6%)
Query: 96 SSAVDFFRWAGRGQRLSP----------YAWNLMVDVLGKNGRF---EQMWNAVRVMKED 142
S ++ RW+ + LS + ++ ++D K G+ E++++ ++K
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD--EMVKRS 356
Query: 143 GVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRA 202
S+ T++S+ + +C + DEA F+ M DVV N+L+ C+ +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 203 LEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLI 262
F ++ + + ++ IL++G + G+ + A + F EMV + P +++ Y T L
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS--DGVPPNIMTYNTLLD 474
Query: 263 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM--MVFHG 320
L + ++++A+ ++ PT+ ++ ++ + K WD+ + G
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG---WDLFCNLSLKG 531
Query: 321 AFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAI 380
PD + YN + + E + F EM ++ P T I L + E +
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 381 EIWNYILENGILPLEASANELLVGLRNLGRL 411
E+ + G +AS L+ + + GRL
Sbjct: 592 ELIKEMRSCGFAG-DASTIGLVTNMLHDGRL 621
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 9/315 (2%)
Query: 92 YDSPSSAVDFFR-WAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPT 149
Y A++ F+ +G R + ++ ++ L GR+ + M E + + T
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQE--NQTSRALEFLN 207
F+++ D++ GK EA +D M ++ +V +SL++ C + ++ + EF+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM- 387
Query: 208 RVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
V K PD ++ L++G+ K VEE + F EM +R + + Y + L +
Sbjct: 388 -VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG--NTVTYNILIQGLFQA 444
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLT 327
D A + + M + P + ++ LD L K A+ +++ + P T
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKMEPTIYT 503
Query: 328 YNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYIL 387
YN++ E + K +V + F + +P + T I+ E A ++ +
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 388 ENGILPLEASANELL 402
E+G LP N L+
Sbjct: 564 EDGTLPNSGCYNTLI 578
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 7/299 (2%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGD-SF 220
K D+AV F M ++ + LLSAI + N+ + +++ + P ++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM-NKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
+IL+ + + + A G+M+ + + P +++ + L K++ EA+ + M
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMM-KLGYEP-NIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKR 340
P F+ + L N ++ A+ L D MV G PD +TY ++ L K
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALID-RMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 341 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 400
++M + + +P L T I L + A+ ++ + GI P + +
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 401 LLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR--SMRDIFDSLERR 457
L+ L N GR SD R +M+ R+I T L AF E + ++D + +R
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 9/303 (2%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F+ + + K+D + + M G+ + + L++ CR+ +Q AL
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRR-SQLPLALAV 138
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEM-VERFEWNPEHVLAYETFLIT 263
L ++ K+ +P+ + + LL G+ + EA +M V ++ N + + T +
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN---TVTFNTLIHG 195
Query: 264 LIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAF- 322
L + EA+ + M + C P L + ++ L K D+ A L + M G
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME--QGKLE 253
Query: 323 PDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEI 382
P L YN I + L K K + + F EM +P + ++ I+ L + A +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 383 WNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYN 442
+ ++E I P + + L+ G+L + + +EM+ R I VT L F
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 443 ESR 445
R
Sbjct: 374 HDR 376
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 143/322 (44%), Gaps = 6/322 (1%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCG 159
F+ +G S ++ +++D L KN F+ MK +GV + T+ + D C
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGD 218
G DEAV+ + MS G++ D+V ++L++ C+ + A E + R+ ++ + P+G
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV-GRFKTAKEIVCRIYRVGLSPNGI 474
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
++ L+ + G ++EA + + M+ E + + + +L + +V EA +F+R
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMI--LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Query: 279 VMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKN 338
M + P F ++ + A ++D M G P TY + + L K
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKG 591
Query: 339 KRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASA 398
+ E EKF + + T +T + + A+ ++ +++ ILP +
Sbjct: 592 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 399 NELLVGLRNLGRLSDVRRFAEE 420
L+ GL G+ FA+E
Sbjct: 652 TSLISGLCRKGKTVIAILFAKE 673
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 135/308 (43%), Gaps = 4/308 (1%)
Query: 116 WNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMS 174
+N++++VL G FE+ ++ M++ G ++ T+ ++ YC G++ A+ D M
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255
Query: 175 MHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVE 234
GV+ DV N L+ +CR L + K+++ P+ ++ L+ G+ EG V
Sbjct: 256 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315
Query: 235 EANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 294
A++ EM+ F +P HV + + I EALK +M+ + P+ +
Sbjct: 316 IASQLLNEMLS-FGLSPNHV-TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 295 ALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKN 354
LD L K N + + + M +G +TY + + L KN + E +EM K+
Sbjct: 374 LLDGLCK-NAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432
Query: 355 EWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDV 414
P + + I + A EI I G+ P + L+ +G L +
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 415 RRFAEEML 422
R E M+
Sbjct: 493 IRIYEAMI 500
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 121/320 (37%), Gaps = 38/320 (11%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G + +N++V L K G+ + +R M DG+L + +F + + Y +G+ +A
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 167 VMSFDVM---------------------------------SMHGVEQ--DVVAVNSLLSA 191
FD M S+H V D V N+LL+A
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 622
Query: 192 ICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNP 251
+C+ N F V++ + PD ++ L+ G ++G A E R P
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 682
Query: 252 EHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQL 311
V+ Y F+ + + Q + F M P + + +D ++ L
Sbjct: 683 NKVM-YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 312 WDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLL 371
M +G P+ TYN++ K K V + +I N P L C + + +
Sbjct: 742 LPEMGNQNGG-PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 800
Query: 372 DADEPEIAIEIWNYILENGI 391
+++ EI ++I + G+
Sbjct: 801 ESNMLEIGLKILKAFICRGV 820
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 110/278 (39%), Gaps = 7/278 (2%)
Query: 157 YCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPD 216
Y G +++ F +M ++G V N++L ++ + S +K+ + PD
Sbjct: 133 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPD 192
Query: 217 GDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF 276
+F IL+ EG+ E+++ +M E+ + P ++ Y T L + + A++
Sbjct: 193 VATFNILINVLCAEGSFEKSSYLMQKM-EKSGYAPT-IVTYNTVLHWYCKKGRFKAAIEL 250
Query: 277 LRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMM--VFHGAFPDSLTYNMIFEC 334
L MK + + ++ + L + N L M + H P+ +TYN +
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH---PNEVTYNTLING 307
Query: 335 LIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPL 394
+V + +EM+ P + I + + A++++ + G+ P
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367
Query: 395 EASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVT 432
E S LL GL R F M + + +T
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 5/210 (2%)
Query: 240 FGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDIL 299
FG ++ + + Y+ + +R + ++L+ R+M P++ + NA IL
Sbjct: 109 FGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSV-YTCNA--IL 165
Query: 300 VKLNDSTHAVQLWDIM--MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQ 357
+ S V +W + M+ PD T+N++ L + +M K+ +
Sbjct: 166 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 225
Query: 358 PTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRF 417
PT + T + + AIE+ +++ G+ + N L+ L R++
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 418 AEEMLNRRILIYEVTMHKLKKAFYNESRSM 447
+M R I EVT + L F NE + +
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 63/362 (17%), Positives = 129/362 (35%), Gaps = 57/362 (15%)
Query: 1 MEVMDESPDFVIKNKIIPSSSSTTTSPTSHNPHRPTRPRFPTHLDAPYISSSARIICEIL 60
M+ + +PD V N +I S +++ P P +++ IL
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTND----LLPEMGNQNGGPNLTTY-----NIL 760
Query: 61 AHASSD--DIESA------LACTGIIPTPDLVHEVLQLSYDSPSSAVDFF---RWAGRGQ 109
H S D+ ++ + GI+P H ++ +S + + RG
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820
Query: 110 RLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMS 169
+ Y +N+++ NG ++ V+
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVK-------------------------------- 848
Query: 170 FDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEK 229
VM+ G+ D ++++S + R + K+ + P+ + L+ G +
Sbjct: 849 --VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCR 906
Query: 230 EGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 289
G+++ A EM+ P +A + L + + DEA LR M PT+
Sbjct: 907 VGDIKTAFVVKEEMIAHKICPPN--VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 290 KFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFH 349
F+ + + K + A++L ++M G D ++YN++ L + + +
Sbjct: 965 ASFTTLMHLCCKNGNVIEALEL-RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1023
Query: 350 EM 351
EM
Sbjct: 1024 EM 1025
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
A + MV L K G+ ++ +R M K V ++ +F ++ C G EA+ VM
Sbjct: 931 AESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSF 220
S G++ D+V+ N L++ +C + + + A E +K GD F
Sbjct: 991 SNCGLKLDLVSYNVLITGLCAKGDM-ALAFELYEEMK------GDGF 1030
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 124/309 (40%), Gaps = 10/309 (3%)
Query: 117 NLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSM 175
N M+D + G+ E+ + + M ++G +L T+ + Y + + + + +
Sbjct: 723 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 782
Query: 176 HGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGNVE 234
+G+ D + +SL+ IC + N L+ L + + V+ D +F +L+ G +
Sbjct: 783 NGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEIN 841
Query: 235 EANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
A M + + + + L R + E+ L M + P + +
Sbjct: 842 WAFDLVKVMTSLGISLDKDTC---DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898
Query: 294 NALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 353
++ L ++ D A + + M+ H P ++ + + L K + E M+K
Sbjct: 899 GLINGLCRVGDIKTAFVVKE-EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 354 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLE-ASANELLVGLRNLGRLS 412
+ PT + T + + A+E+ ++ N L L+ S N L+ GL G ++
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALEL-RVVMSNCGLKLDLVSYNVLITGLCAKGDMA 1016
Query: 413 DVRRFAEEM 421
EEM
Sbjct: 1017 LAFELYEEM 1025
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 157/333 (47%), Gaps = 7/333 (2%)
Query: 83 LVHEVLQLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE 141
L+H + ++ S AV R RG + + + ++V+ L K G + +N + M+
Sbjct: 196 LIHGLFL--HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 142 DGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTS 200
+ ++ ++++ DS C D+A+ F M GV +V+ +SL+S +C E +
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD 313
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF 260
+ + +++ ++P+ +F L++ + KEG + EA K + EM++R +P+ + Y +
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSL 371
Query: 261 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHG 320
+ ++DEA +M ++CFP + ++ ++ K V+L+ M G
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR-EMSQRG 430
Query: 321 AFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAI 380
+++TY + + + + F +M+ + P + T + L + E A+
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 381 EIWNYILENGILPLEASANELLVGLRNLGRLSD 413
++ Y+ + + P + N ++ G+ G++ D
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 150/353 (42%), Gaps = 20/353 (5%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N++++ + + + ++MK S+ T +S+ + YC + +AV D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G D + +L+ + N+ S A+ ++R V++ P+ ++ +++ G K G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 232 NVEEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
+++ A +M + E N V+ Y T + +L + + D+AL M+ + P +
Sbjct: 240 DIDLAFNLLNKMEAAKIEAN---VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 350
+S+ + L + A +L M + P+ +T+N + + +K ++ E EK + E
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDM-IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 351 MIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGR 410
MIK P ++ I D + A ++ ++ P + N L+ G R
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 411 LSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESRSMRDIFDSLERRCKTSQM 463
+ + EM R ++ VT L F+ R C +QM
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ------------ARDCDNAQM 456
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 144/336 (42%), Gaps = 6/336 (1%)
Query: 112 SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSF 170
S + +N ++ + K +F+ + + M+ G+ +L T+ + + +C + A+
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 171 DVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEK 229
M G E +V ++SLL+ C + + S A+ ++++ ++ PD +F L+ G
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 230 EGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 289
EA MV+R P +++ Y + L + +D A L M+ +
Sbjct: 203 HNKASEAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 290 KFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFH 349
+S +D L K A+ L+ M G P+ +TY+ + CL +R + +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLF-TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 350 EMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLG 409
+MI+ + P + I + + A ++++ +++ I P + + L+ G
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 410 RLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
RL + + E M+++ VT + L F R
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 83 LVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKED 142
L+H Q + D ++ + F + G + +N ++D L KNG+ E+ ++
Sbjct: 441 LIHGFFQ-ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 143 GVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQ 195
+ ++ T+ + + C AGK ++ F +S+ GV+ DV+ N+++S CR+
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 134 NAVRVMKE---DGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLL 189
NA V K+ DGV ++ T+ ++ D C GK ++A++ F+ + +E + N ++
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 190 SAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVE 245
+C+ F + K V PD + ++ G+ ++G EEA+ F +M E
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 139/289 (48%), Gaps = 18/289 (6%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLS-LPTFASIFDSYCGAG 161
R G + +N +V+ + ++G + +R M+E V + + T+++I DS C G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFA 221
D A+ F M G++ VV NSL+ +C+ AL + V + + P+ +F
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
+LL+ + KEG ++EAN+ + EM+ R +P +++ Y T + ++ EA L +M
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITR-GISP-NIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 282 GENCFPTLKFFSNALD--ILVKLNDSTHAVQLWDIMMVF-----HGAFPDSLTYNMIFEC 334
C P + F++ + +VK D D M VF G +++TY+++ +
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVD--------DGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 335 LIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIW 383
++ ++ E+ F EM+ + P + + L D + E A+EI+
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 143/316 (45%), Gaps = 6/316 (1%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y N+M++ + + ++ + +VMK TF ++ GK EAV+ D
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSFAILLEGWEKEG 231
M +G + DVV NS+++ ICR TS AL+ L ++ ++ V D +++ +++ ++G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRS-GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
++ A F EM + V+ Y + + L + + ++ L+ M P +
Sbjct: 243 CIDAAISLFKEM--ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 292 FSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 351
F+ LD+ VK A +L+ M+ G P+ +TYN + + R+ E M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYK-EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 352 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 411
++N+ P + + I + ++++ I + G++ + + L+ G G++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 412 SDVRRFAEEMLNRRIL 427
+EM++ +L
Sbjct: 420 KLAEELFQEMVSHGVL 435
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCG 159
F + RG + ++++V ++G+ + + M GVL + T+ + D C
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
GK ++A+ F+ + ++ +V +++ +C+ F + K V P+ +
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 220 FAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV 279
+ +++ G K+G++ EAN +M E + N + Y T + +R + + K +
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEE--DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 280 MK 281
MK
Sbjct: 569 MK 570
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 161/370 (43%), Gaps = 11/370 (2%)
Query: 81 PDLV-HEVLQLSYDSPSSAVDFFRW--AGRGQRLSP--YAWNLMVDVLGKNGRFEQMWNA 135
PD+V + L +Y S + F A G+ SP Y +N +++ L K+G++E+
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 136 VRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICR 194
M G+ T+ S+ C G E F M V D+V +S++S R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 195 QENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEH 253
N +AL + N VK+ + PD + IL++G+ ++G + A EM++ +
Sbjct: 388 SGN-LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ--QGCAMD 444
Query: 254 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWD 313
V+ Y T L L + K + EA K M FP + +D KL + +A++L+
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 314 IMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDA 373
M D +TYN + + K + ++ + +M+ E PTP++ + + L
Sbjct: 505 KMKEKRIRL-DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 374 DEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTM 433
A +W+ ++ I P N ++ G G SD F E+M++ + ++
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 434 HKLKKAFYNE 443
+ L F E
Sbjct: 624 NTLIYGFVRE 633
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 152/326 (46%), Gaps = 14/326 (4%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G ++ Y N+MV+ L K+G+ E++ + ++E GV + T+ ++ +Y G +EA
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALE-FLNRVKKIVDPDGDSFAILLE 225
+ M G V N++++ +C+ + RA E F ++ + PD ++ LL
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKH-GKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
K+G+V E K F +M R + P+ ++ + + + R +D+AL + +K
Sbjct: 349 EACKKGDVVETEKVFSDMRSR-DVVPD-LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVE 345
P ++ + + + A+ L + M+ G D +TYN I L K K + E +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ-QGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 346 KFFHEMIKNEWQPTPLNCATAITMLLDA----DEPEIAIEIWNYILENGILPLEASANEL 401
K F+EM + P + +T+L+D + A+E++ + E I + N L
Sbjct: 466 KLFNEMTERALFPD----SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 402 LVGLRNLGRLSDVRRFAEEMLNRRIL 427
L G +G + + +M+++ IL
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEIL 547
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 129/312 (41%), Gaps = 8/312 (2%)
Query: 119 MVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIF-DSYCGAGKYDEAVMSFDVMSMHG 177
M+ + ++G ++ +KE G++ +I YC G A+ + M G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 178 VEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEAN 237
DVV N++L +C+++ F ++ + PD + IL++G K GN++ A
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 238 KTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 296
+ F +M E R + V+ Y T L + +D A + M + PT +S +
Sbjct: 501 ELFQKMKEKRIRLD---VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 297 DILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEW 356
+ L A ++WD M+ P + N + + ++ + E F +MI +
Sbjct: 558 NALCSKGHLAEAFRVWD-EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 357 QPTPLNCATAITMLLDADEPEIAIEIWNYILE--NGILPLEASANELLVGLRNLGRLSDV 414
P ++ T I + + A + + E G++P + N +L G ++ +
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 415 RRFAEEMLNRRI 426
+M+ R +
Sbjct: 677 EVVLRKMIERGV 688
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 3/246 (1%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
T + D +C G A+ F M + DVV N+LL + + + + +
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
V K + P S++IL+ +G++ EA + + EM+ + P V+ + + R
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPT-VMICNSMIKGYCRSG 599
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAF-PDSLT 327
+ FL M E P ++ + V+ + + A L M G PD T
Sbjct: 600 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFT 659
Query: 328 YNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYIL 387
YN I + ++ E E +MI+ P I + D A I + +L
Sbjct: 660 YNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Query: 388 ENGILP 393
+ G P
Sbjct: 720 QRGFSP 725
>sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containing protein At1g02420
OS=Arabidopsis thaliana GN=At1g02420 PE=3 SV=2
Length = 491
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 160/369 (43%), Gaps = 54/369 (14%)
Query: 67 DIESALACTGIIPTPDLVHEVLQ---LSYDSPSSAVDFFRWAG--RGQRLSPYAWNLMVD 121
+++ +L+ +GI + DL+ VL+ S+ +P ++F+R+A RG S ++ + M+
Sbjct: 57 ELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLY 116
Query: 122 VLGKNGRFEQMWN-AVRVMKEDGVLSLPTFASI----FDSYCGAGKYDEAVMSFDVMSMH 176
+LG+N +F+Q+W + ++D L P + C + E+ F +
Sbjct: 117 ILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPD 176
Query: 177 GVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWE-------- 228
D N+LL +C QE + A + +K PD +F ILL GW+
Sbjct: 177 FF--DTACFNALLRTLC-QEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAF 233
Query: 229 ------------------------KEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
K+ +E+A K +M E E P+ V+ Y T + L
Sbjct: 234 FEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE-EETPD-VITYTTVIGGL 291
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALD---ILVKLNDSTHAVQLWDIMMVFHGA 321
Q D+A + L+ MK C+P + ++ A+ I +L D+ V MV G
Sbjct: 292 GLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVD----EMVKKGL 347
Query: 322 FPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIE 381
P++ TYN+ F L + + + M+ NE P +C I M ++ ++A+
Sbjct: 348 SPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMR 407
Query: 382 IWNYILENG 390
+W ++ G
Sbjct: 408 LWEDMVVKG 416
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 153/324 (47%), Gaps = 5/324 (1%)
Query: 92 YDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPT 149
++ S AV R RG + + + +V+ L K G + + ++ M++ + +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
+ +I D+ C ++A+ F M G+ +VV NSL+ +C + + + +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 210 KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ 269
++ ++P+ +F+ L++ + KEG + EA K + EM++R +P+ + Y + + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSLINGFCMHDR 375
Query: 270 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYN 329
+DEA +M ++CFP + ++ + K ++L+ M G +++TYN
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR-EMSQRGLVGNTVTYN 434
Query: 330 MIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILEN 389
+ + L + +K F +M+ + P + + + L + E A+ ++ Y+ ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 390 GILPLEASANELLVGLRNLGRLSD 413
+ P + N ++ G+ G++ D
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVED 518
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 5/314 (1%)
Query: 91 SYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLP 148
+Y + + A++ F +G R + +N ++ L GR+ + M E + ++
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF+++ D++ GK EA +D M ++ D+ +SL++ C + F
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
+ K P+ ++ L++G+ K VEE + F EM +R + + Y T + L +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG--NTVTYNTLIQGLFQAG 444
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTY 328
D A K + M + P + +S LD L K A+ +++ + PD TY
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK-SKMEPDIYTY 503
Query: 329 NMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILE 388
N++ E + K +V + F + +P + T I+ E A ++ + E
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 389 NGILPLEASANELL 402
+G LP + N L+
Sbjct: 564 DGTLPNSGTYNTLI 577
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 126/299 (42%), Gaps = 7/299 (2%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSF 220
K D+AV F M +V N LLSAI + N+ + R++ + + D S+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKM-NKFDLVISLGERMQNLRISYDLYSY 118
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
IL+ + + + A G+M+ + + P+ ++ + L GK++ EA+ + M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMM-KLGYEPD-IVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKR 340
P F+ + L N ++ AV L D MV G PD TY + L K
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALID-RMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 341 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 400
+ +M K + + + T I L + A+ ++ + GI P + N
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 401 LLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR--SMRDIFDSLERR 457
L+ L N GR SD R +M+ R+I VT L AF E + ++D + +R
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 156/384 (40%), Gaps = 47/384 (12%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y++N++++ + + + ++MK + T +S+ + YC + EAV D
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M + + + V N+L+ + N+ S A+ ++R V + PD ++ ++ G K G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLH-NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN------- 284
+++ A +M E+ + + V+ Y T + L K V++AL M +
Sbjct: 235 DIDLALSLLKKM-EKGKIEAD-VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 285 ------CF----------------------PTLKFFSNALDILVKLNDSTHAVQLWDIMM 316
C P + FS +D VK A +L+D M
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-EM 351
Query: 317 VFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEP 376
+ PD TY+ + + R+ E + F MI + P + T I A
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 377 EIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRR----ILIYEVT 432
E +E++ + + G++ + N L+ GL G ++ ++M++ I+ Y +
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 433 MHKLKKAFYNESRSMRDIFDSLER 456
+ L K Y + +F+ L++
Sbjct: 472 LDGLCK--YGKLEKALVVFEYLQK 493
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 150/351 (42%), Gaps = 7/351 (1%)
Query: 98 AVDFFRWAGRGQRL-SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFD 155
AVD F + + L S +N ++ + K +F+ + + M+ + L ++ + +
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 156 SYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VD 214
+C + A+ M G E D+V ++SLL+ C + + S A+ ++++ +
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK-RISEAVALVDQMFVMEYQ 182
Query: 215 PDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL 274
P+ +F L+ G EA MV R P+ + Y T + L + +D AL
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPD-LFTYGTVVNGLCKRGDIDLAL 240
Query: 275 KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFEC 334
L+ M+ + ++ +D L + A+ L+ M G P+ +TYN + C
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF-TEMDNKGIRPNVVTYNSLIRC 299
Query: 335 LIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPL 394
L R + + +MI+ + P + + I + + A ++++ +++ I P
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 395 EASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
+ + L+ G RL + + E M+++ VT + L K F R
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/130 (18%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+++++D L K G+ E+ +++ + + T+ + + C AGK ++ F +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNV 233
S+ GV+ +V+ +++S CR+ + F + P+ ++ L+ ++G+
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDK 586
Query: 234 EEANKTFGEM 243
+ + EM
Sbjct: 587 AASAELIKEM 596
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 8/247 (3%)
Query: 117 NLMVDVLGKNGRFEQMWNAVRV---MKE-DGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
++++ + GR + ++++RV MK+ D S + ++ + + A +
Sbjct: 87 DILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN 146
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALE-FLNRVKKIVDPDGDSFAILLEGWEKEG 231
M G+ V ++N L+ A+CR + L+ FL K+ DPD ++ L+ G + G
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
++EA K F EMVE+ + P V+ Y + + L K VDEA+++L MK + P +
Sbjct: 207 RIDEAKKLFTEMVEK-DCAPT-VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 292 FSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 351
+S+ +D L K S A++L+++MM G P+ +TY + L K +++ E + M
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMA-RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Query: 352 IKNEWQP 358
+P
Sbjct: 324 NLQGLKP 330
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
T+ ++ C G+ DEA F M VV SL++ +C +N A+ +L
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN-VDEAMRYLEE 252
Query: 209 VK-KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
+K K ++P+ +++ L++G K+G +A + F M+ R P V Y T + L +
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR-GCRPNMV-TYTTLITGLCKE 310
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLT 327
+++ EA++ L M + P + + ++ A D M+ G P+ LT
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD-EMILGGITPNRLT 369
Query: 328 YNM 330
+N+
Sbjct: 370 WNI 372
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 9/182 (4%)
Query: 247 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL---N 303
F+ +P AY T L L+ Q++ A KF + M+ PT+ +L++L+K N
Sbjct: 115 FDCDPSQK-AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVA----SLNVLIKALCRN 169
Query: 304 DSTHAVQLWDIM-MVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLN 362
D T L + M G PDS TY + L + R+ E +K F EM++ + PT +
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 363 CATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEML 422
+ I L + + A+ + GI P + + L+ GL GR E M+
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 423 NR 424
R
Sbjct: 290 AR 291
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE-DGVLSLPTFASIFDSYCG 159
F RG Y + ++ L + GR ++ M E D ++ T+ S+ + CG
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALE-FLNRVKKIVDPDGD 218
+ DEA+ + M G+E +V +SL+ +C+ + ++ +A+E F + + P+
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCK-DGRSLQAMELFEMMMARGCRPNMV 298
Query: 219 SFAILLEGWEKEGNVEEANKTFGEM 243
++ L+ G KE ++EA + M
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRM 323
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 9/216 (4%)
Query: 252 EHVLAYETFLITLIRG-KQVDEALKFLRV---MKGENCFPTLKFFSNALDILVKLNDSTH 307
E+ + E L+++ RG +V LRV MK +C P+ K + L ILV+ N
Sbjct: 80 ENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNL 139
Query: 308 AVQLWDIMMVFHGAFPDSLTYNMIFECLIKN-KRVHEVEKFFHEMIKNEWQPTPLNCATA 366
A + + M G P + N++ + L +N V K F EM K P T
Sbjct: 140 AFKFYKNMREI-GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTL 198
Query: 367 ITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI 426
I+ L + A +++ ++E P + L+ GL + + R+ EEM ++ I
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Query: 427 LIYEVTMHKLKKAFYNESRSMR--DIFD-SLERRCK 459
T L + RS++ ++F+ + R C+
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 136/290 (46%), Gaps = 4/290 (1%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAG 161
R RG + + + ++V+ L K G + +N + M+ + + F +I DS C
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFA 221
D+A+ F M G+ +VV +SL+S +C + + + ++K ++P+ +F
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
L++ + KEG EA K +M++R +P+ + Y + + ++D+A + M
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKR-SIDPD-IFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRV 341
++CFP L ++ + K +L+ M G D++TY + + L +
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 342 HEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGI 391
+K F +M+ + P + + + L + + E A+E+++Y+ ++ I
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 149/334 (44%), Gaps = 8/334 (2%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N++++ + + + ++MK S+ T +S+ + YC + +AV D
Sbjct: 46 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 105
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G D + +L+ + N+ S A+ ++R V++ P+ ++ +++ G K G
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 232 NVEEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
+++ A +M + E + V+ + T + +L + + VD+AL + M+ + P +
Sbjct: 165 DIDLAFNLLNKMEAAKIEAD---VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 350
+S+ + L + A QL M + P+ +T+N + + +K + E EK +
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 351 MIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGR 410
MIK P + I D + A +++ +++ P + N L+ G R
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 411 LSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNES 444
+ D EM +R ++ VT L + +++
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 132/315 (41%), Gaps = 9/315 (2%)
Query: 92 YDSPSSAVDFFR-WAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPT 149
Y A++ F+ +G R + ++ ++ L GR+ + M E + +L T
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQE--NQTSRALEFLN 207
F ++ D++ GK+ EA D M ++ D+ NSL++ C + ++ + EF+
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM- 316
Query: 208 RVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
V K PD D++ L++G+ K VE+ + F EM R + Y T + L
Sbjct: 317 -VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD--TVTYTTLIQGLFHD 373
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLT 327
D A K + M + P + +S LD L A++++D M D
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYI 432
Query: 328 YNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYIL 387
Y + E + K +V + F + +P + T I+ L + A + +
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 388 ENGILPLEASANELL 402
E+G LP + N L+
Sbjct: 493 EDGPLPDSGTYNTLI 507
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 119/282 (42%), Gaps = 5/282 (1%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F + + K+D + + M G+ ++ N L++ CR+ +Q S AL
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRR-SQISLALAL 67
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ +P + + LL G+ + +A +MVE + P+ + + T + L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPD-TITFTTLIHGL 125
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPD 324
+ EA+ + M C P L + ++ L K D A L + M D
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK-IEAD 184
Query: 325 SLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWN 384
+ +N I + L K + V + F EM +P + ++ I+ L A ++ +
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 385 YILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI 426
++E I P + N L+ G+ + + ++M+ R I
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 142/336 (42%), Gaps = 6/336 (1%)
Query: 112 SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSF 170
S + +N ++ + K +F+ + + M+ G+ +L T+ + + +C + A+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 171 DVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEK 229
M G E +V ++SLL+ C + + S A+ ++++ ++ PD +F L+ G
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 230 EGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTL 289
EA MV+R P +++ Y + L + +D A L M+ +
Sbjct: 128 HNKASEAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 290 KFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFH 349
F+ +D L K A+ L+ M G P+ +TY+ + CL R + +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMET-KGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 350 EMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLG 409
+MI+ + P + I + + A ++ + +++ I P + N L+ G
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 410 RLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
RL ++ E M+++ T + L K F R
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 6/329 (1%)
Query: 83 LVHEVLQLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE 141
LVH + Q ++ S AV R +G + + +++ L K G + N + M++
Sbjct: 186 LVHGLFQ--HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 142 DGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTS 200
+ + + +I D C D+A F+ M G++ DV N L+S +C +
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF 260
+ + ++K ++PD F L++ + KEG + EA K + EMV+ P+ V+AY T
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD-VVAYNTL 362
Query: 261 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHG 320
+ + K+V+E ++ R M ++ + + D +A ++ MV G
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK-QMVSDG 421
Query: 321 AFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAI 380
PD +TYN++ + L N V F M K + + + T I L A + E
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 381 EIWNYILENGILPLEASANELLVGLRNLG 409
+++ + G+ P + ++ G G
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 8/296 (2%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF ++ K EAV + M + G + D+V ++++ +C++ + AL LN+
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR-GEPDLALNLLNK 240
Query: 209 VKK-IVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
++K ++ D + +++G K ++++A F +M E P+ V Y + L
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPD-VFTYNPLISCLCNY 298
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLT 327
+ +A + L M +N P L FF+ +D VK A +L+D M+ FPD +
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 328 YNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYIL 387
YN + + K KRV E + F EM + + T I A + + A ++ ++
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 388 ENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR----RILIYEVTMHKLKKA 439
+G+ P + N LL GL N G + E M R I+ Y + L KA
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 131/317 (41%), Gaps = 10/317 (3%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F+ + + K+D + + M G+ ++ + ++ CR+ +Q S AL
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRR-SQLSLALAI 132
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ P + LL G+ + EA +MVE + P+ V + T + L
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTV-TFTTLVHGL 190
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAF-P 323
+ + EA+ + M + C P L + ++ L K + A+ L + M G
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME--KGKIEA 248
Query: 324 DSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIW 383
D + YN I + L K K + + F++M +P I+ L + A +
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 384 NYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHK-LKKAF-- 440
+ +LE I P N L+ G+L + + +EM+ + +V + L K F
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 441 YNESRSMRDIFDSLERR 457
Y ++F + +R
Sbjct: 369 YKRVEEGMEVFREMSQR 385
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 5/285 (1%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSF 220
K D+A+ F M +V + LLSAI + N+ + +++ + + + ++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKM-NKFDLVISLGEQMQNLGISHNLYTY 113
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
+I + + + + A G+M+ + + P ++ + L G ++ EA+ + M
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMM-KLGYGPS-IVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKR 340
P F+ + L + N ++ AV L + MV G PD +TY + L K
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE-RMVVKGCQPDLVTYGAVINGLCKRGE 230
Query: 341 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 400
++M K + + + T I L + A +++N + GI P + N
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 401 LLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
L+ L N GR SD R +ML + I V + L AF E +
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Query: 83 LVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVM-KE 141
L+H Q + D ++ + F + G +N+++D L NG E M K
Sbjct: 397 LIHGFFQ-ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 142 DGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSR 201
D L + T+ ++ ++ C AGK ++ F +S+ GV+ +VV +++S CR+ +
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 202 ALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEM 243
F+ + P+ ++ L+ ++G+ + + EM
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
>sp|P0C8R0|PP416_ARATH Putative pentatricopeptide repeat-containing protein At5g43820
OS=Arabidopsis thaliana GN=At5g43820 PE=3 SV=1
Length = 546
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 157/357 (43%), Gaps = 7/357 (1%)
Query: 68 IESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWAGR--GQRLSPYAWNLMVDVLGK 125
I+ +L+ GI + D+V +VL S + V FF WA R G ++++++ LG+
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGR 163
Query: 126 NGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVA 184
F M + ++ M +GV L DS+ A+ F+ GV+ +
Sbjct: 164 RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTES 223
Query: 185 VNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMV 244
N+LL +C + + S A N K + D S+ I++ GW K G VEE K EMV
Sbjct: 224 FNALLRCLC-ERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 245 ERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLND 304
E + P+ L+Y + L R +++++++ +K + P ++ + + D
Sbjct: 283 ES-GFGPD-CLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 305 STHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCA 364
+++ + M+ P+ TY+ + LIK ++V + + F EM+ PT
Sbjct: 341 FDESMRYYR-RMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 365 TAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEM 421
+ + L P A+ I+ + G E++ LL L G+ + +EM
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM 456
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 76 GIIPTPDLVHEVLQ--LSYDSPSSAVDFFRWAGR-GQRLSPYAWNLMVDVLGKNGRFEQM 132
G++PT LV L+ SY P +A+ ++ + + G R+S A+ L++ L + G+ +
Sbjct: 390 GVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGML 449
Query: 133 WNAVRVMKEDGVLS-LPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSA 191
N M+E G S + + I D C G + AV+ + G + V S LS+
Sbjct: 450 LNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF-VYSRLSS 508
Query: 192 ICRQENQTSRALEFLNRVKK 211
N+T A + ++KK
Sbjct: 509 KLMASNKTELAYKLFLKIKK 528
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 111/279 (39%), Gaps = 35/279 (12%)
Query: 180 QDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAI-LLEGWEKEGNVE-EAN 237
++ VA++S LSA + + L+ + ++K + G +I ++ GN+ EA
Sbjct: 75 KNQVAIDSFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAM 134
Query: 238 KTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALD 297
TF + R + V +Y L L R K + L+ M E P L+ + A+D
Sbjct: 135 VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMD 194
Query: 298 ILVKLNDSTHAVQLWD--------------------------------IMMVFHGAFP-D 324
V+++ A++L++ + G P D
Sbjct: 195 SFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFD 254
Query: 325 SLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWN 384
S +YN++ K V E+EK EM+++ + P L+ + I L ++EI++
Sbjct: 255 SCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFD 314
Query: 385 YILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLN 423
I G +P N ++ + + R+ ML+
Sbjct: 315 NIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLD 353
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 3/343 (0%)
Query: 103 RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGK 162
R +G S A+N ++ L K G+ ++ MK+D +L T+ + D C AGK
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 163 YDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAI 222
D A D M G+ +V VN ++ +C+ + F K+ PD +F
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 223 LLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 282
L++G K G V++A K + +M++ + + Y + + + ++ K + M
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLD--SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 283 ENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVH 342
+NC P L+ + +D + K + +++ + PD+ +Y+++ LIK +
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA-RRFVPDARSYSILIHGLIKAGFAN 569
Query: 343 EVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELL 402
E + F+ M + I + A ++ + G P + ++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 403 VGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
GL + RL + EE ++RI + V L F R
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGR 672
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 138/335 (41%), Gaps = 53/335 (15%)
Query: 107 RGQRLSPYA--WNLMVDVLGKNGRFEQMWNAVRVMKEDG-VLSLPTFASIFDSYCGAGKY 163
+ +R P A +++++ L K G + + MKE G VL + + D +C GK
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 164 DEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAIL 223
++A + M G E VV S++ + + + + F K ++ + ++ L
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 224 LEGWEKEGNVEEANKTFGEMVER------FEWNPEHVLAYETFLITLIRGKQVDEALKFL 277
++G+ K G ++EA E++++ + WN + L L++ ++++EAL
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN--------SLLDALVKAEEINEALVCF 715
Query: 278 RVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIK 337
+ MK C P + +TY ++ L K
Sbjct: 716 QSMKELKCTP------------------------------------NQVTYGILINGLCK 739
Query: 338 NKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEAS 397
++ ++ F+ EM K +P+ ++ T I+ L A A +++ NG +P A
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSAC 799
Query: 398 ANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVT 432
N ++ GL N R D EE R + I+ T
Sbjct: 800 YNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKT 834
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 139/319 (43%), Gaps = 7/319 (2%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEA 166
G + + + ++ K GR + + + MK + + + DS+ GK D A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD-PDGDSFAILLE 225
F + +G++ D V S++ +C+ N+ A+E ++K P ++ ++
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKA-NRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
G+ G +EA +R + + V+AY L L + +VDEALK MK ++
Sbjct: 317 GYGSAGKFDEAYSLLER--QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDA 373
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVE 345
P L ++ +D+L + A +L D M G FP+ T N++ + L K++++ E
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQK-AGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 346 KFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGL 405
F EM P + + I L + A +++ +L++ L+
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 406 RNLGRLSDVRRFAEEMLNR 424
N GR D + ++M+N+
Sbjct: 493 FNHGRKEDGHKIYKDMINQ 511
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 126/289 (43%), Gaps = 8/289 (2%)
Query: 83 LVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKED 142
L+H +++ + + + + F+ +G L A+N+++D K G+ + + + MK
Sbjct: 558 LIHGLIKAGFANETYEL-FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 143 GVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSR 201
G ++ T+ S+ D + DEA M F+ +E +VV +SL+ +
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 202 ALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFL 261
L ++K + P+ ++ LL+ K + EA F M E + P V Y +
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE-LKCTPNQV-TYGILI 734
Query: 262 ITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGA 321
L + ++ ++A F + M+ + P+ ++ + L K + A L+D +G
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA-NGG 793
Query: 322 FPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITML 370
PDS YN + E L R + F E + + P++ T + +L
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFEETRR---RGLPIHNKTCVVLL 839
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 242 EMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK 301
+M+ +F++ P AY T + D L + M+ PT+ F+ + K
Sbjct: 157 QMMRKFKFRPAFS-AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 302 LNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPL 361
A+ L D M D + YN+ + K +V KFFHE+ N +P +
Sbjct: 216 EGRVDSALSLLDEMKS-SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 362 NCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAE 419
+ I +L A+ + A+E++ ++ +N +P + N +++G + G+ + E
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 144/316 (45%), Gaps = 9/316 (2%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ T S+ + +C ++ EAV D M G +VV N++++ +C+ + + F
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 206 LNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLI 265
KK + D ++ L+ G G +A + +MV+R + +P +V+ + + T +
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDP-NVIFFTALIDTFV 265
Query: 266 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDS 325
+ + EA + M + P + +++ ++ A ++D +MV G FPD
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD-LMVSKGCFPDV 324
Query: 326 LTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNY 385
+TYN + K+KRV + K F EM T I A + +A +++N
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 386 ILENGILPLEASANELLVGLRNLGRLSDVRRFAEEM----LNRRILIYEVTMHKLKKAFY 441
+++ G+ P + N LL L N G++ E++ ++ I+ Y + + L +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT-- 442
Query: 442 NESRSMRDIFDSLERR 457
++ + +F SL R+
Sbjct: 443 DKLKEAWCLFRSLTRK 458
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 149/365 (40%), Gaps = 41/365 (11%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDG-VLSLPTFASIFDSYCGAGKYDEA 166
G R S +++ + RF++ + V M G V ++ + ++ + C + A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEG 226
+ F M G+ D V N+L+S + T A + VK+ +DP+ F L++
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 227 WEKEGNVEEANKTFGEMVER------FEWN----------------------------PE 252
+ KEGN+ EA + EM+ R F +N P+
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 253 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLW 312
V+ Y T + + K+V++ +K M + ++ + + A +++
Sbjct: 324 -VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 313 DIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLD 372
+ MV G PD +TYN++ +CL N ++ + ++ K+E + I L
Sbjct: 383 N-RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 373 ADEPEIAIEIWNYILENGILPLEASANELLVGL--RNLGRLSD--VRRFAEEMLNRRILI 428
D+ + A ++ + G+ P + ++ GL + L R +D RR E+ I
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 429 YEVTM 433
Y+ T+
Sbjct: 502 YDETL 506
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 119/285 (41%), Gaps = 5/285 (1%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSF 220
K+D+A F M +V +L+ I + N+ + ++++ + + D SF
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKM-NKFDIVIYLYHKMENLGISHDLYSF 117
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
IL+ + + + A G+M+ + + P ++ + L +G + EA+ + M
Sbjct: 118 TILIHCFCRCSRLSLALALLGKMM-KLGFRPS-IVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKR 340
G P + ++ ++ L K D +A++++ M G D++TYN + L + R
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK-KGIRADAVTYNTLISGLSNSGR 234
Query: 341 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 400
+ + +M+K + P + I + A ++ ++ ++P + N
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 401 LLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
L+ G G L D + + M+++ VT + L F R
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 151/353 (42%), Gaps = 39/353 (11%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G + + Y + + + VLG+ G+ + + ++ M ++G + T+ + D+ C A K D A
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD-PDGDSFAILLE 225
F+ M + D V +LL + S +F + ++K PD +F IL++
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS-VKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
K GN EA T M ++ H Y T + L+R ++D+AL+ M+
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLH--TYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIM-----------------------------M 316
PT + +D K DS A++ ++ M
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 317 VFHGA-----FPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLL 371
+F+G PDS+TYNM+ +C K + E K EM++N +P + + I L
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 372 DADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 424
AD + A +++ + E + P + N LL GL G++ + E M+ +
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 139/346 (40%), Gaps = 75/346 (21%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL----------------------------- 145
+ ++VD L K G F + ++ + VM++ G+L
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 146 -------SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQ 198
+ T+ D Y +G A+ +F+ M G+ ++VA N+ L ++ + +
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA-GR 483
Query: 199 TSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVE------------ 245
A + +K I + PD ++ ++++ + K G ++EA K EM+E
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 246 ----------------------RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 283
+ P V+ Y T L L + ++ EA++ M +
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPT-VVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 284 NCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHE 343
C P F+ D L K ++ T A+++ MM G PD TYN I L+KN +V E
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM-GCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 344 VEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILEN 389
FFH+M K + P + T + ++ A E A +I L N
Sbjct: 662 AMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFLYN 706
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 159/370 (42%), Gaps = 20/370 (5%)
Query: 55 IICEILAHASSDDIES---ALACTGIIPTPD-LVHEVLQLS--YDSPSSAVDFFRWAGRG 108
+I ILA A D+ S L GI D ++ +++ S +++ S A F +
Sbjct: 719 LIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKD 778
Query: 109 QRLSPY--AWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDE 165
+ P +NL++ L + E + +K G + + T+ + D+Y +GK DE
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD--PDGDSFAIL 223
+ MS H E + + N ++S + + N AL+ + D P ++ L
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGN-VDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 224 LEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGE 283
++G K G + EA + F M++ + P + Y + + + D A + M E
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLD-YGCRPNCAI-YNILINGFGKAGEADAACALFKRMVKE 955
Query: 284 NCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHE 343
P LK +S +D L + + + + G PD + YN+I L K+ R+ E
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE-SGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 344 VEKFFHEMIKNEWQPTPLNCATAITMLLD---ADEPEIAIEIWNYILENGILPLEASANE 400
F+EM K TP + T +++L+ A E A +I+N I G+ P + N
Sbjct: 1015 ALVLFNEM-KTSRGITP-DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 401 LLVGLRNLGR 410
L+ G G+
Sbjct: 1073 LIRGYSLSGK 1082
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 139/331 (41%), Gaps = 16/331 (4%)
Query: 91 SYDSPSSAVDFFRWAGRGQRL--SPYAWNLMVDVLGKNGRFEQMWNAV-----RVMKEDG 143
S+ S+ +F+ L + N M++ L +G+ E+M R++K D
Sbjct: 94 SFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRD- 152
Query: 144 VLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRAL 203
T+ +IF S G +A + M G + + N L+ + + T A+
Sbjct: 153 ---TNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCT-EAM 208
Query: 204 EFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLI 262
E R + + P +++ L+ G K +++ EM E P +V + +
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKP-NVYTFTICIR 266
Query: 263 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAF 322
L R +++EA + L+ M E C P + ++ +D L A ++++ M
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK- 325
Query: 323 PDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEI 382
PD +TY + + N+ + V++F+ EM K+ P + + L A A +
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 383 WNYILENGILPLEASANELLVGLRNLGRLSD 413
+ + + GILP + N L+ GL + RL D
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 116/289 (40%), Gaps = 4/289 (1%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMK-EDGVLSLPTFASIFDSYCGAGKYDEAV-MSFDV 172
+N ++D GK+G+ ++++ + M + + T + AG D+A+ + +D+
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGN 232
MS L+ + + F + P+ + IL+ G+ K G
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 233 VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 292
+ A F MV+ E + Y + L +VDE L + + +K P + +
Sbjct: 942 ADAACALFKRMVK--EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 293 SNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 352
+ ++ L K + A+ L++ M G PD TYN + L V E K ++E+
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 353 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANEL 401
+ +P I + +PE A ++ ++ G P + +L
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 142/339 (41%), Gaps = 14/339 (4%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRF--EQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGK--- 162
G L+ Y++N ++ +L K+ RF E M R++ E SL T++S+ G GK
Sbjct: 183 GFVLNAYSYNGLIHLLLKS-RFCTEAMEVYRRMILEGFRPSLQTYSSLM---VGLGKRRD 238
Query: 163 YDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFA 221
D + M G++ +V + + R + + A E L R+ + PD ++
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA-GKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 222 ILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK 281
+L++ ++ A + F E ++ P+ V Y T L + +D +F M+
Sbjct: 298 VLIDALCTARKLDCAKEVF-EKMKTGRHKPDRV-TYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 282 GENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRV 341
+ P + F+ +D L K + A D+M G P+ TYN + L++ R+
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD-QGILPNLHTYNTLICGLLRVHRL 414
Query: 342 HEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANEL 401
+ + F M +PT I + + A+E + + GI P + N
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 402 LVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAF 440
L L GR + ++ + + ++ VT + + K +
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 28/307 (9%)
Query: 164 DEAVMSFDVMSMHGVEQDVVAVNSLLSAICR---QENQTSRALEFLNRVKK--IVDPDGD 218
D AV + + +G+ +D +S+L I R + N S A + K V P
Sbjct: 730 DNAVSFSERLVANGICRDG---DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP 786
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
++ +L+ G + +E A F + V+ P+ V Y L + ++DE + +
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQ-VKSTGCIPD-VATYNFLLDAYGKSGKIDELFELYK 844
Query: 279 VMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKN 338
M C + + LVK + A+ L+ +M P + TY + + L K+
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 339 KRVHEVEKFFHEMIKNEWQPTPLNCA---TAITMLLDADEPEIAIEIWNYILENGILPLE 395
R++E ++ F M+ +P NCA I A E + A ++ +++ G+ P
Sbjct: 905 GRLYEAKQLFEGMLDYGCRP---NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 396 ASANELLVGLRNLGRLSDVRRFAEEM----LNRRILIYEVTMHKLKKA--------FYNE 443
+ + L+ L +GR+ + + +E+ LN ++ Y + ++ L K+ +NE
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 444 SRSMRDI 450
++ R I
Sbjct: 1022 MKTSRGI 1028
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 160/343 (46%), Gaps = 18/343 (5%)
Query: 108 GQRLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYD 164
G +SP Y N++V+ + + + + M + G+ + T +S+ + +C +
Sbjct: 116 GIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIK 175
Query: 165 EAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAIL 223
+AV M G+++DVV L+ +C+ ALE L R+K + + P+ +++ L
Sbjct: 176 DAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR-LVVPALEVLKRMKDRGISPNVVTYSSL 234
Query: 224 LEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLI-RGK--QVDEALKFLRVM 280
+ G K G + +A + EM + + NP +V+ + + RGK +VD K + M
Sbjct: 235 ITGLCKSGRLADAERRLHEMDSK-KINP-NVITFSALIDAYAKRGKLSKVDSVYKMMIQM 292
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKR 340
+ P + +S+ + L N A+++ D +M+ G P+ +TY+ + K+ R
Sbjct: 293 SID---PNVFTYSSLIYGLCMHNRVDEAIKMLD-LMISKGCTPNVVTYSTLANGFFKSSR 348
Query: 341 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 400
V + K +M + ++C T I A + ++A+ ++ Y+ NG++P S N
Sbjct: 349 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 408
Query: 401 LLVGLRNLGRLSDVRRFAEEMLNRR----ILIYEVTMHKLKKA 439
+L GL G + E M R I+ Y + +H + KA
Sbjct: 409 VLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 451
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 178 VEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEA 236
+ D+ N L++ CR Q S AL +L ++ K+ ++PD + + L+ G+ ++++A
Sbjct: 119 ISPDLYTCNILVNCFCRCF-QPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDA 177
Query: 237 NKTFGEMVERFEWNPEHVLAYETFLI-TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNA 295
G+M E+ + V+ +T LI TL + + V AL+ L+ MK
Sbjct: 178 VYVAGQM-EKMGIKRDVVV--DTILIDTLCKNRLVVPALEVLKRMKDR------------ 222
Query: 296 LDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNE 355
G P+ +TY+ + L K+ R+ + E+ HEM +
Sbjct: 223 ------------------------GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 258
Query: 356 WQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVR 415
P + + I + ++ +++ I P + + L+ GL R+ +
Sbjct: 259 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 318
Query: 416 RFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
+ + M+++ VT L F+ SR
Sbjct: 319 KMLDLMISKGCTPNVVTYSTLANGFFKSSR 348
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 141/302 (46%), Gaps = 5/302 (1%)
Query: 92 YDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPT 149
++ S AV R RG + + + ++V+ L K G + N + M+ + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
F +I DS C D+A+ F M G+ +VV +SL+S +C + + + +
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 210 KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQ 269
+K ++P+ +F L++ + KEG EA K + +M++R +P+ + Y + + +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPD-IFTYNSLVNGFCMHDR 380
Query: 270 VDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYN 329
+D+A + M ++CFP + ++ + K +L+ M G D++TY
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR-EMSHRGLVGDTVTYT 439
Query: 330 MIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILEN 389
+ + L + +K F +M+ + P + + + L + + E A+E+++Y+ ++
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 390 GI 391
I
Sbjct: 500 EI 501
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 149/334 (44%), Gaps = 8/334 (2%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N++++ + + + ++MK S+ T +S+ + YC + +AV D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G D + +L+ + N+ S A+ ++R V++ P+ ++ +++ G K G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLH-NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 232 NVEEANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
+ + A +M + E + V+ + T + +L + + VD+AL + M+ + P +
Sbjct: 240 DTDLALNLLNKMEAAKIEAD---VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 350
+S+ + L + A QL M + P+ +T+N + + +K + E EK + +
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 351 MIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGR 410
MIK P + + D + A +++ +++ P + N L+ G R
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 411 LSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNES 444
+ D EM +R ++ VT L + +++
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 141/332 (42%), Gaps = 6/332 (1%)
Query: 116 WNLMVDVLGKNGRFEQMWNAVRVMKE-DGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMS 174
+N ++ + K +F+ + + M+ + V L T+ + + +C + A+ M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 175 MHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNV 233
G E +V ++SLL+ C + + S A+ ++++ ++ PD +F L+ G
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGK-RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
EA MV+R P +++ Y + L + D AL L M+ + F+
Sbjct: 207 SEAVALVDRMVQR-GCQP-NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 294 NALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIK 353
+D L K A+ L+ M G P+ +TY+ + CL R + + +MI+
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMET-KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 354 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSD 413
+ P + I + + A ++++ +++ I P + N L+ G RL
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 414 VRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
++ E M+++ VT + L K F R
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 127/299 (42%), Gaps = 7/299 (2%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDG-DSF 220
K D+A+ F M +V N LLSAI + + + + +++++ G ++
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK-KFDVVISLGEKMQRLEIVHGLYTY 123
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVM 280
IL+ + + + A G+M+ + + P ++ + L GK++ +A+ + M
Sbjct: 124 NILINCFCRRSQISLALALLGKMM-KLGYEPS-IVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 281 KGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKR 340
P F+ + L N ++ AV L D MV G P+ +TY ++ L K
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVD-RMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 341 VHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANE 400
++M + + + T I L + A+ ++ + GI P + +
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 401 LLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR--SMRDIFDSLERR 457
L+ L + GR SD + +M+ ++I VT + L AF E + ++D + +R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+++++D L NG+ E+ M++ + L + + ++ + C AGK D+ F +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD-PDGDSFAILLEGWEKEGN 232
S+ GV+ +VV N+++S +C + A L ++K+ P+ ++ L+ ++G+
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKR-LLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 233 VEEANKTFGEM 243
+ + EM
Sbjct: 591 KAASAELIREM 601
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 158/375 (42%), Gaps = 53/375 (14%)
Query: 68 IESALACTGIIPTPDLVHEVLQLSYDSPSSAVDFFRWA--GRGQRLSPYAWNLMVDVLGK 125
+ESAL TGI P+ +LVH + SP F+WA G LSP ++ +V+ L K
Sbjct: 88 LESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCK 147
Query: 126 NGRFEQMWNAV--RVMKEDG--VLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMH----G 177
FE W+ V RV ++G ++S TF + Y AG +A+ +F+ +
Sbjct: 148 AREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCK 207
Query: 178 VEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVD----PDGDSFAILLEGWEKEGNV 233
++ + LL A+C+ E A +L R+ +D P F ILL GW + +
Sbjct: 208 SATELRLLEVLLDALCK-EGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKL 266
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMK------------ 281
++A K + EM + P V+ Y T + R ++V A++ L MK
Sbjct: 267 KQAEKLWEEM-KAMNVKPT-VVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFN 324
Query: 282 ------GE-----------------NCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVF 318
GE PT+ +++ + K D A ++ +MM
Sbjct: 325 PIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT- 383
Query: 319 HGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEI 378
G P + TYN F+ K+ + E + ++I+ P L + ML + + +
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSL 443
Query: 379 AIEIWNYILENGILP 393
A+++ + GI P
Sbjct: 444 AMQVNKEMKNRGIDP 458
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
T+ I C GK A+ M G++ D++ L+ +CR E EF N
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNA 486
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANK 238
V++ + P +F ++ G +G + A +
Sbjct: 487 VRRGIIPQYITFKMIDNGLRSKGMSDMAKR 516
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 137/303 (45%), Gaps = 8/303 (2%)
Query: 107 RGQRLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKY 163
R + SP +N+M+ L G+ + + + D ++ T+ + ++ G
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 164 DEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAI 222
DEA+ D M G++ D+ N+++ +C+ E RA E + ++ K +PD S+ I
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCK-EGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 223 LLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 282
LL +G EE K +M + +P +V+ Y + TL R +++EA+ L++MK
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSE-KCDP-NVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 283 ENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVH 342
+ P + + + A++ + M+ G PD + YN + L KN +
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLET-MISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 343 EVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELL 402
+ + F ++ + P + T + L + + A+ + ++ NGI P E + N ++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 403 VGL 405
L
Sbjct: 481 SCL 483
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 148/336 (44%), Gaps = 7/336 (2%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDE 165
RG + + +N ++ + K G ++ + VR ++ G + ++ + + GK++E
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 166 AVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILL 224
M + +VV + L++ +CR + + A+ L +K K + PD S+ L+
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCR-DGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 225 EGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN 284
+ +EG ++ A + M+ + ++ Y T L TL + + D+AL+ +
Sbjct: 376 AAFCREGRLDVAIEFLETMIS--DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 285 CFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEV 344
C P ++ L D A+ + + M+ +G PD +TYN + CL + V E
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMI-LEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Query: 345 EKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVG 404
+ +M E+ P+ + + A E AI + ++ NG P E + L+ G
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 405 LRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAF 440
+ G ++ A +++ R I E + +L + F
Sbjct: 553 IGFAGYRAEAMELANDLV-RIDAISEYSFKRLHRTF 587
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 123/305 (40%), Gaps = 37/305 (12%)
Query: 153 IFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI 212
IF C +G Y E++ + M G DV+ L+ N +A+ + ++K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN-IPKAVRVMEILEKF 153
Query: 213 VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDE 272
PD ++ L+ G+ K +++A + M + +++P+ V Y + +L ++D
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTV-TYNIMIGSLCSRGKLDL 211
Query: 273 ALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMV--------------- 317
ALK L + +NC PT+ ++ ++ + A++L D M+
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 318 -------------------FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQP 358
G PD ++YN++ L+ + E EK +M + P
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 359 TPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFA 418
+ + IT L + E A+ + + E G+ P S + L+ GRL F
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 419 EEMLN 423
E M++
Sbjct: 392 ETMIS 396
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 137/347 (39%), Gaps = 39/347 (11%)
Query: 135 AVRVMK---EDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSA 191
AVRVM+ + G + + ++ + +C + D+A D M D V N ++ +
Sbjct: 143 AVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 192 ICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVER---- 246
+C + + AL+ LN+ + P ++ IL+E EG V+EA K EM+ R
Sbjct: 203 LCSR-GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 261
Query: 247 --FEWNP---------------------------EHVLAYETFLITLIRGKQVDEALKFL 277
F +N V++Y L L+ + +E K +
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 278 RVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIK 337
M E C P + +S + L + A+ L +M G PD+ +Y+ + +
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE-KGLTPDAYSYDPLIAAFCR 380
Query: 338 NKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEAS 397
R+ +F MI + P +N T + L + + A+EI+ + E G P +S
Sbjct: 381 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 398 ANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNES 444
N + L + G EM++ I E+T + + E
Sbjct: 441 YNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487
Score = 38.9 bits (89), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 63/159 (39%), Gaps = 2/159 (1%)
Query: 266 RGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDS 325
R E+L L M + P + + + L + AV++ +I+ F PD
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF--GQPDV 158
Query: 326 LTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNY 385
YN + K R+ + + M ++ P + I L + ++A+++ N
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 386 ILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNR 424
+L + P + L+ G + + + +EML+R
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 9/303 (2%)
Query: 116 WNLMVDVLGKNGRFEQMWNAVRVMKEDGVL--SLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+ +++ L K G+ + + M E+ L S ++ SI D + G+ D AV +++ M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK-KIVDPDGDSFAILLEGWEKEGN 232
+G+ +V+ SL++ +C+ N+ +ALE + +K K V D ++ L++G+ K N
Sbjct: 611 CGNGISPNVITYTSLMNGLCKN-NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 233 VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 292
+E A+ F E++E NP + Y + + + AL + M + L +
Sbjct: 670 MESASALFSELLEE-GLNPSQPI-YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 293 SNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 352
+ +D L+K + A +L+ M G PD + Y +I L K + +V K F EM
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAV-GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMK 786
Query: 353 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLS 412
KN P L I + A + + +L+ GILP A+ + L+ G +G L
Sbjct: 787 KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNLQ 844
Query: 413 DVR 415
VR
Sbjct: 845 PVR 847
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 166/386 (43%), Gaps = 37/386 (9%)
Query: 59 ILAHASSDDIESALACTGII----PTPDLVHEVLQLSYDSPSSAVDFFRWAGRGQR---- 110
I H ++D+ SAL + P+P+ V + S +++FR G ++
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSV---------TFSVLIEWFRKNGEMEKALEF 396
Query: 111 --------LSPYAWNLMVDVLG--KNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGA 160
L+P +++ + G K + E+ E G+ ++ +I C
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQ 456
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSF 220
GK DEA M G+ +VV+ N+++ CRQ+N + F N ++K + P+ ++
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 221 AILLEGWEKEGNVEEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV 279
+IL++G + + + A + M E N + Y+T + L + Q +A + L
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNG---VVYQTIINGLCKVGQTSKARELLAN 573
Query: 280 MKGEN--CFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIK 337
M E C + + S +D K + AV ++ M +G P+ +TY + L K
Sbjct: 574 MIEEKRLCVSCMSYNS-IIDGFFKEGEMDSAVAAYE-EMCGNGISPNVITYTSLMNGLCK 631
Query: 338 NKRVHEVEKFFHEMIKNEWQPTPLNCATA-ITMLLDADEPEIAIEIWNYILENGILPLEA 396
N R+ + + EM KN+ + A I E A +++ +LE G+ P +
Sbjct: 632 NNRMDQALEMRDEM-KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 397 SANELLVGLRNLGRLSDVRRFAEEML 422
N L+ G RNLG + ++ML
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKML 716
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 174/408 (42%), Gaps = 18/408 (4%)
Query: 47 PYISSSARIICEILAHASSDDIESALACTGI----IPTPDLVHEVLQLSYDSPSSAVDFF 102
PY++ + + + + + ++ S + G+ + T L+ L+ + P+ A++
Sbjct: 199 PYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLR--EEKPAEALEVL 256
Query: 103 -RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDG--VLSLPTFASIFDSYCG 159
R RG ++L V K + +R MKE V S T+ S+ +
Sbjct: 257 SRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVK 316
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
G D+A+ D M G+ +VVA SL++ C+ + S + F K+ P+ +
Sbjct: 317 QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVT 376
Query: 220 FAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV 279
F++L+E + K G +E+A + + +M E P V T + ++G++ +EALK
Sbjct: 377 FSVLIEWFRKNGEMEKALEFYKKM-EVLGLTPS-VFHVHTIIQGWLKGQKHEEALKLFD- 433
Query: 280 MKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYN--MIFECLIK 337
E + + L L K + A +L M G P+ ++YN M+ C K
Sbjct: 434 ESFETGLANVFVCNTILSWLCKQGKTDEATELLS-KMESRGIGPNVVSYNNVMLGHCRQK 492
Query: 338 NKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEAS 397
N + + F +++ +P + I + + A+E+ N++ + I
Sbjct: 493 NMDLARI--VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550
Query: 398 ANELLVGLRNLGRLSDVRRFAEEML-NRRILIYEVTMHKLKKAFYNES 444
++ GL +G+ S R M+ +R+ + ++ + + F+ E
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 117/267 (43%), Gaps = 10/267 (3%)
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV--KKIVDPDGDSFAILLEGWEKE 230
M+ +E + V ++++ +C+ QTS+A E L + +K + S+ +++G+ KE
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKV-GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 231 GNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLK 290
G ++ A + EM +P +V+ Y + + L + ++D+AL+ MK + +
Sbjct: 598 GEMDSAVAAYEEMCGN-GISP-NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 291 FFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 350
+ +D K ++ A L+ ++ G P YN + + + +
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLE-EGLNPSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 351 MIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGR 410
M+K+ + T I LL +A E++ + G++P E ++ GL G+
Sbjct: 715 MLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ 774
Query: 411 LSDVRRFAEEM----LNRRILIYEVTM 433
V + EEM + +LIY +
Sbjct: 775 FVKVVKMFEEMKKNNVTPNVLIYNAVI 801
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 22/325 (6%)
Query: 107 RGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLP------TFASIFDSYCGA 160
+G L+ +N ++ KNG Q NA R++KE +LS+ +F S+ C
Sbjct: 407 KGLSLTSSTYNTLIKGYCKNG---QADNAERLLKE--MLSIGFNVNQGSFTSVICLLCSH 461
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALE----FLNRVKKIVDPD 216
+D A+ M + + + +L+S +C+ + S+ALE FLN+ +VD
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH-GKHSKALELWFQFLNK-GFVVDTR 519
Query: 217 GDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKF 276
+ LL G + G ++EA + E++ R ++Y T + K++DEA F
Sbjct: 520 TSN--ALLHGLCEAGKLDEAFRIQKEILGR--GCVMDRVSYNTLISGCCGKKKLDEAFMF 575
Query: 277 LRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLI 336
L M P +S + L +N A+Q WD +G PD TY+++ +
Sbjct: 576 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR-NGMLPDVYTYSVMIDGCC 634
Query: 337 KNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEA 396
K +R E ++FF EM+ QP + I + +A+E+ + GI P A
Sbjct: 635 KAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSA 694
Query: 397 SANELLVGLRNLGRLSDVRRFAEEM 421
+ L+ G+ + R+ + + EEM
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEM 719
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 164/367 (44%), Gaps = 24/367 (6%)
Query: 82 DLVHEVL--QLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRV 138
DL+ EV Q D A+D F A +G S N+++ L + F++ A V
Sbjct: 205 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 264
Query: 139 MKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAI--CRQE 196
+ + + F + +++C GK +EAV F M GV +VV N+++ + C +
Sbjct: 265 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324
Query: 197 NQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVL 255
++ A F + V++ ++P +++IL++G + + +A EM ++ P +V+
Sbjct: 325 DE---AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK--GFPPNVI 379
Query: 256 AYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIM 315
Y + + I +++A++ +M + T ++ + K + +A +L M
Sbjct: 380 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 439
Query: 316 M-----VFHGAFPDSLTYNMIFECLIKNKRVHEVE-KFFHEMIKNEWQPTPLNCATAITM 369
+ V G+F + CL+ + + + +F EM+ P T I+
Sbjct: 440 LSIGFNVNQGSFTSVI-------CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 492
Query: 370 LLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIY 429
L + A+E+W L G + ++N LL GL G+L + R +E+L R ++
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Query: 430 EVTMHKL 436
V+ + L
Sbjct: 553 RVSYNTL 559
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/452 (19%), Positives = 171/452 (37%), Gaps = 76/452 (16%)
Query: 67 DIESALACTGIIPTPDLVHEVLQ--LSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLG 124
D+ LA G+ P+ + +L + + + F +G Y + ++
Sbjct: 225 DVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFC 284
Query: 125 KNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVV 183
K G+ E+ M+E GV ++ TF ++ D G+YDEA M + M G+E ++
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 344
Query: 184 AVNSLLSAICR----------------------------------QENQTSRALEFLN-R 208
+ L+ + R + ++A+E +
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVE-RFEWNPEHVLAYETFLITLIRG 267
V K + ++ L++G+ K G + A + EM+ F N ++ + + L
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG---SFTSVICLLCSH 461
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMM----------- 316
D AL+F+ M N P + + L K + A++LW +
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521
Query: 317 --VFHG---------AFP------------DSLTYNMIFECLIKNKRVHEVEKFFHEMIK 353
+ HG AF D ++YN + K++ E F EM+K
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 354 NEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSD 413
+P + I L + ++ E AI+ W+ NG+LP + + ++ G R +
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 414 VRRFAEEMLNRRILIYEVTMHKLKKAFYNESR 445
+ F +EM+++ + V + L +A+ R
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 673
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 7/236 (2%)
Query: 124 GKNGRFEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVV 183
GK+ + ++W + + + V+ T ++ C AGK DEA + G D V
Sbjct: 497 GKHSKALELW--FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 554
Query: 184 AVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGE 242
+ N+L+S C ++ + A FL+ VK+ + PD +++IL+ G VEEA + F +
Sbjct: 555 SYNTLISGCCGKK-KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-FWD 612
Query: 243 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 302
+R P+ V Y + + ++ +E +F M +N P +++ + +
Sbjct: 613 DCKRNGMLPD-VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 671
Query: 303 NDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQP 358
+ A++L + M G P+S TY + + + RV E + F EM +P
Sbjct: 672 GRLSMALELREDMK-HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 726
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 4/188 (2%)
Query: 260 FLITLIRGKQVDEALK-FLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVF 318
L +L+R + + + F V KG + P + F+ A++ K AV+L+ M
Sbjct: 245 LLTSLVRANEFQKCCEAFDVVCKGVS--PDVYLFTTAINAFCKGGKVEEAVKLFSKMEE- 301
Query: 319 HGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEI 378
G P+ +T+N + + L R E F +M++ +PT + + + L A
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 361
Query: 379 AIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKK 438
A + + + G P N L+ G L+ + M+++ + + T + L K
Sbjct: 362 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 421
Query: 439 AFYNESRS 446
+ ++
Sbjct: 422 GYCKNGQA 429
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/333 (19%), Positives = 155/333 (46%), Gaps = 7/333 (2%)
Query: 83 LVHEVLQLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE 141
L+H + + ++ S AV R +G + + ++V+ L K G + + ++ M++
Sbjct: 192 LIHGLFR--HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 142 DGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTS 200
+ + + +I D+ C ++A+ F M G+ +VV NSL+ +C +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF 260
+ + +++ ++P+ +F+ L++ + KEG + EA K + EM++R +P+ + Y +
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD-IFTYSSL 367
Query: 261 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHG 320
+ ++DEA +M ++CFP + ++ + K ++L+ M G
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR-EMSQRG 426
Query: 321 AFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAI 380
+++TY + + + + F +M+ + P + + + L + + E A+
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 381 EIWNYILENGILPLEASANELLVGLRNLGRLSD 413
++ Y+ + + P + N ++ G+ G++ D
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 145/329 (44%), Gaps = 6/329 (1%)
Query: 119 MVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHG 177
++ + K +F+ + + M+ G+ +L T++ + + +C + A+ M G
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 178 VEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKI-VDPDGDSFAILLEGWEKEGNVEEA 236
E D+V +NSLL+ C N+ S A+ + ++ ++ PD +F L+ G + EA
Sbjct: 147 YEPDIVTLNSLLNGFC-HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 237 NKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNAL 296
MV + P+ ++ Y + L + +D AL L+ M+ P + ++ +
Sbjct: 206 VALVDRMVVK-GCQPD-LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 297 DILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEW 356
D L + A+ L+ M G P+ +TYN + CL R + + +MI+ +
Sbjct: 264 DALCNYKNVNDALNLF-TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 357 QPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRR 416
P + + I + + A ++++ +++ I P + + L+ G RL + +
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 417 FAEEMLNRRILIYEVTMHKLKKAFYNESR 445
E M+++ VT + L K F R
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 42/315 (13%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F+ + + K+D + + M G+ ++ + L++ CR+ +Q S AL
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRR-SQLSLALAV 138
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ +PD + LL G+ + +A G+MVE + P+ TF TL
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE-MGYQPDSF----TF-NTL 192
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPD 324
I G L + N ++ AV L D MV G PD
Sbjct: 193 IHG-------------------------------LFRHNRASEAVALVD-RMVVKGCQPD 220
Query: 325 SLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWN 384
+TY ++ L K + +M + + +P + T I L + A+ ++
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 385 YILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNES 444
+ GI P + N L+ L N GR SD R +M+ R+I VT L AF E
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 445 R--SMRDIFDSLERR 457
+ ++D + +R
Sbjct: 341 KLVEAEKLYDEMIKR 355
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 134/314 (42%), Gaps = 5/314 (1%)
Query: 91 SYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLP 148
+Y + + A++ F +G R + +N ++ L GR+ + M E + ++
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
TF+++ D++ GK EA +D M ++ D+ +SL++ C + F
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
+ K P+ ++ L++G+ K V+E + F EM +R + + Y T + + +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG--NTVTYTTLIHGFFQAR 445
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTY 328
+ D A + M + P + +S LD L A+ +++ + PD TY
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR-SKMEPDIYTY 504
Query: 329 NMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILE 388
N++ E + K +V + F + +P + T ++ E A ++ + E
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 389 NGILPLEASANELL 402
G LP + N L+
Sbjct: 565 EGPLPDSGTYNTLI 578
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 129/329 (39%), Gaps = 41/329 (12%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y ++++++ + + + ++MK + T S+ + +C + +AV
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G + D N+L+ + R N+ S A+ ++R V K PD ++ I++ G K G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRH-NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRG 235
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGEN------- 284
+++ A +M E+ + P V+ Y T + L K V++AL M +
Sbjct: 236 DIDLALSLLKKM-EQGKIEP-GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 285 ------CF----------------------PTLKFFSNALDILVKLNDSTHAVQLWDIMM 316
C P + FS +D VK A +L+D M
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-EM 352
Query: 317 VFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEP 376
+ PD TY+ + + R+ E + F MI + P + T I A
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 377 EIAIEIWNYILENGILPLEASANELLVGL 405
+ +E++ + + G++ + L+ G
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 39.3 bits (90), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 1/166 (0%)
Query: 257 YETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMM 316
Y I + ++D+A+ M FP++ FS L + K+N + L + M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 317 VFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEP 376
G + TY+++ C + ++ +M+K ++P + + + +
Sbjct: 109 NL-GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 377 EIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEML 422
A+ + ++E G P + N L+ GL R S+ + M+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Score = 39.3 bits (90), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
Query: 83 LVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKED 142
L+H Q + + ++ + F + G +++++D L NG+ E ++
Sbjct: 437 LIHGFFQ-ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 143 GVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSR 201
+ + T+ + + C AGK ++ F +S+ GV+ +VV +++S CR+ +
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 202 ALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEM 243
F ++ PD ++ L+ ++G+ + + EM
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 14/319 (4%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G + + Y + + + L ++ + E+ +MK+ GVL +L T++++ D YC G +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICR-QENQTSRALEFLNRVKKIVDPDGDSFAILLE 225
+ + + + +VV +L+ C+ +E T+R+L F++ VK VDP+ + L+
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL-FVHMVKFGVDPNLYVYNCLIH 347
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
G K GN+ EA EM E +P+ V Y + L QV EA + + MK E
Sbjct: 348 GHCKSGNMLEAVGLLSEM-ESLNLSPD-VFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVE 345
FP+ +++ + K + A+ L M G P+ +T++ + + + +
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTA-SGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 346 KFFHEMIKNEWQPTPLNCATAITMLLDADEPEI----AIEIWNYILENGILPLEASANEL 401
+ EM P T L+DA E A+ +++ +LE GI P + + L
Sbjct: 465 GLYFEMTIKGIVPD----VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 402 LVGLRNLGRLSDVRRFAEE 420
+ G GRLS F +E
Sbjct: 521 VDGFWKEGRLSVAIDFYQE 539
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 152/359 (42%), Gaps = 11/359 (3%)
Query: 104 WAGRGQRLSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGA 160
W R + SP A +++ L + RF+ +W ++M G++ + + +F
Sbjct: 153 WVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQ 212
Query: 161 GKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKK-IVDPDGDS 219
G Y + D M+ G++ +V + +CR +N+ A + +KK V P+ +
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR-DNKMEEAEKMFELMKKHGVLPNLYT 271
Query: 220 FAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV 279
++ +++G+ K GNV +A + E++ E P +V+ + T + + +++ A
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVA-ELLP-NVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 280 MKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNK 339
M P L ++ + K + AV L M + + PD TY ++ L
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS-PDVFTYTILINGLCIED 388
Query: 340 RVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASAN 399
+V E + F +M P+ + I E A+++ + + +G+ P + +
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 400 ELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNES---RSMRDIFDSLE 455
L+ G N+ + EM + I+ VT L A + E+ ++R D LE
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 7/185 (3%)
Query: 107 RGQRLSPYA--WNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKY 163
+ +R+ P + +N ++ K EQ + M GV ++ TF+++ D YC
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 164 DEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAIL 223
A+ + M++ G+ DVV +L+ A ++ N + + ++ + P+ +FA L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 224 LEGWEKEGNVEEANKTFGE-MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKG 282
++G+ KEG + A + E +R WN HV + + L + + A +F M+
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWN--HV-GFTCLIEGLCQNGYILRASRFFSDMRS 577
Query: 283 ENCFP 287
P
Sbjct: 578 CGITP 582
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 7/330 (2%)
Query: 116 WNLMVDVLGKNGR-FEQMWNAVRVMKEDGVLSLPTFASIFDSYCGAGK-YDEAVMSFDVM 173
+N++++V GK G + ++ + V MK DG+ + + C G + EA F+ M
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGN 232
G D V N+LL + + ++ A++ LN V P ++ L+ + ++G
Sbjct: 306 KAAGFSYDKVTYNALLD-VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 233 VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 292
++EA + +M E+ V Y T L R +V+ A+ M+ C P + F
Sbjct: 365 LDEAMELKNQMAEK--GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 293 SNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMI 352
+ + + T ++++D + V G PD +T+N + +N EV F EM
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVC-GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 353 KNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLS 412
+ + P T I+ E A+ ++ +L+ G+ P ++ N +L L G
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 413 DVRRFAEEMLNRRILIYEVTMHKLKKAFYN 442
+ EM + R E+T L A+ N
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 146/351 (41%), Gaps = 41/351 (11%)
Query: 111 LSP--YAWNLMVDVLGKNGRFEQMWNAVRVMKEDG-VLSLPTFASIFDSYCGAGKYDEAV 167
LSP WN ++ V G+NG ++ + MK G V TF ++ +Y G +++A+
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 168 MSFDVMSMHGVEQDVVAVNSLLSAICRQE--NQTSRALEFL--NRVK------------- 210
+ M GV D+ N++L+A+ R Q+ + L + R K
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 211 ------------------KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPE 252
+++P L+ K + EA + F E+ ER ++P+
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GFSPD 628
Query: 253 HVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLW 312
+ + + R + V +A L MK P++ +++ + + + D + ++
Sbjct: 629 -ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 313 DIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLD 372
++ G PD ++YN + +N R+ + + F EM + P + T I
Sbjct: 688 REILA-KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 373 ADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLN 423
E AI + Y++++G P + + N ++ G L R + + F E++ N
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 7/307 (2%)
Query: 118 LMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMH 176
+++ +LGK GR N ++EDG L + ++ S+ ++ +G+Y EAV F M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 177 GVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKK-IVDPDGDSFAILLEGWEKEGNVEE 235
G + ++ N +L+ + ++ + ++K + PD ++ L+ ++ +E
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 236 ANKTFGEM-VERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSN 294
A + F EM F ++ + Y L + + EA+K L M P++ +++
Sbjct: 298 AAQVFEEMKAAGFSYDK---VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 295 ALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKN 354
+ + A++L + M G PD TY + + +V F EM
Sbjct: 355 LISAYARDGMLDEAMELKN-QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 355 EWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDV 414
+P I M + + ++I++ I G+ P + N LL G S+V
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 415 RRFAEEM 421
+EM
Sbjct: 474 SGVFKEM 480
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 121/315 (38%), Gaps = 43/315 (13%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N ++ + ++ MK G T+ ++ D Y + + EA+ +
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSFAILLEGWEKEG 231
M ++G +V NSL+SA R + A+E N++ +K PD ++ LL G+E+ G
Sbjct: 340 MVLNGFSPSIVTYNSLISAYAR-DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 232 NVEEA----------------------------NKTFGEMVERFE------WNPEHVLAY 257
VE A F EM++ F+ +P+ ++ +
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD-IVTW 457
Query: 258 ETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMV 317
T L + E + MK P + F+ + + A+ ++ M+
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 318 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADE-- 375
G PD TYN + L + + EK EM +P L + + + E
Sbjct: 518 -AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 376 --PEIAIEIWNYILE 388
+A E+++ ++E
Sbjct: 577 LMHSLAEEVYSGVIE 591
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 123/299 (41%), Gaps = 9/299 (3%)
Query: 162 KYDEAVMSFDVMSMHGVEQDVV--AVNSLLSAICRQENQTSRALEFLNRVKK-IVDPDGD 218
K+D A+ +FD Q ++ +V +++ ++ +E + S A N +++ D
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIR-GKQVDEALKFL 277
S+ L+ + G EA F +M E + ++ Y L + G ++ +
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEE--DGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 278 RVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIK 337
MK + P ++ + + + A Q+++ M ++ D +TYN + + K
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY-DKVTYNALLDVYGK 326
Query: 338 NKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEAS 397
+ R E K +EM+ N + P+ + + I+ + A+E+ N + E G P +
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 398 ANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNESR--SMRDIFDSL 454
LL G G++ EEM N T + K + N + M IFD +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 145/333 (43%), Gaps = 6/333 (1%)
Query: 114 YAWNLMVDVLGKNGRFEQMWNAV-RVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDV 172
Y +N+M++ L + + + ++MK S+ T S+ + +C + EAV D
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 173 MSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEG 231
M G + D V +L+ + Q N+ S A+ + R V K PD ++ ++ G K G
Sbjct: 161 MVEMGYQPDTVTFTTLVHGL-FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 232 NVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKF 291
+ A +M E+ + + V+ Y T + +L + + VD+AL M + P +
Sbjct: 220 EPDLALNLLNKM-EKGKIEAD-VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 292 FSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 351
+S+ + L + A +L M+ P+ +T+N + + K ++ E EK F EM
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 352 IKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRL 411
I+ P + + I D + A +I+ ++ LP + N L+ G ++
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 412 SDVRRFAEEMLNRRILIYEVTMHKLKKAFYNES 444
D +M R ++ VT L F+ S
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 153/333 (45%), Gaps = 7/333 (2%)
Query: 83 LVHEVLQLSYDSPSSAVDFF-RWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE 141
LVH + Q ++ S AV R +G + + +++ L K G + N + M++
Sbjct: 176 LVHGLFQ--HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 142 DGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTS 200
+ + ++++ DS C D+A+ F M G+ DV +SL+S +C +
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 201 RALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETF 260
+ + +++ ++P+ +F L++ + KEG + EA K F EM++R +P +++ Y +
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDP-NIVTYNSL 351
Query: 261 LITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHG 320
+ ++DEA + +M ++C P + ++ ++ K ++L+ M G
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR-RG 410
Query: 321 AFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAI 380
+++TY + + + F +M+ + P + T + L + E A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 381 EIWNYILENGILPLEASANELLVGLRNLGRLSD 413
++ Y+ ++ + P + N + G+ G++ D
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 7/302 (2%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F+ + + K+D + + M + GV ++ N +++ +CR+ +Q S AL
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRR-SQLSFALAI 122
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ P + LL G+ + EA +MVE + P+ V + T + L
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTV-TFTTLVHGL 180
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAF-P 323
+ + EA+ + M + C P L + ++ L K + A+ L + M G
Sbjct: 181 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME--KGKIEA 238
Query: 324 DSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIW 383
D + Y+ + + L K + V + F EM +P ++ I+ L + A +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 384 NYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYNE 443
+ +LE I P + N L+ G+L + + +EM+ R I VT + L F
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 444 SR 445
R
Sbjct: 359 DR 360
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 124/303 (40%), Gaps = 4/303 (1%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCG 159
F +G R + ++ ++ L GR+ + M E + ++ TF S+ D++
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDS 219
GK EA FD M ++ ++V NSL++ C + F V K PD +
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 220 FAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRV 279
+ L+ G+ K V + + F +M R + + Y T + + D A +
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVG--NTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 280 MKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNK 339
M + P + ++ LD L K A+ +++ + PD TYN++ E + K
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK-SKMEPDIYTYNIMSEGMCKAG 499
Query: 340 RVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASAN 399
+V + F + +P + T I+ E A ++ + E+G LP + N
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 400 ELL 402
L+
Sbjct: 560 TLI 562
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 83 LVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKED 142
L+H Q S D ++ + F + G + +N ++D L KNG+ E+ +++
Sbjct: 421 LIHGFFQAS-DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 143 GVL-SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSR 201
+ + T+ + + C AGK ++ F +S+ GV+ DV+A N+++S C++ +
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 202 ALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEM 243
F+ + PD ++ L+ ++G+ + + EM
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 100/238 (42%), Gaps = 4/238 (1%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+N +++ + R ++ +M +D + + T+ ++ + +C A K + + F M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNV 233
S G+ + V +L+ + + + + F V V P+ ++ LL+G K G +
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 234 EEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFS 293
E+A F E +++ + P+ + Y + + +V++ + + P + ++
Sbjct: 467 EKAMVVF-EYLQKSKMEPD-IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 294 NALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEM 351
+ K A L+ I M G PDS TYN + +++ + EM
Sbjct: 525 TMISGFCKKGLKEEAYTLF-IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 140/297 (47%), Gaps = 5/297 (1%)
Query: 146 SLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEF 205
S+ F + + KYD + M + G+ D+ N +++ C Q S AL
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC-CCFQVSLALSI 142
Query: 206 LNRVKKI-VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITL 264
L ++ K+ +PD + L+ G+ + V +A +MVE + P+ ++AY + +L
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPD-IVAYNAIIDSL 200
Query: 265 IRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPD 324
+ K+V++A F + ++ + P + ++ ++ L + + A +L M + P+
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPN 259
Query: 325 SLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWN 384
+TY+ + + +KN +V E ++ F EM++ P + ++ I L D + A ++++
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 385 YILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFY 441
++ G L S N L+ G R+ D + EM R ++ VT + L + F+
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 5/279 (1%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
T S+ + +C + +AV D M G + D+VA N+++ ++C+ + + + A +F
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK-RVNDAFDFFKE 215
Query: 209 V-KKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRG 267
+ +K + P+ ++ L+ G +A + +M+++ + P +V+ Y L ++
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITP-NVITYSALLDAFVKN 273
Query: 268 KQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLT 327
+V EA + M + P + +S+ ++ L + A Q++D +MV G D ++
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD-LMVSKGCLADVVS 332
Query: 328 YNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYIL 387
YN + K KRV + K F EM + + T I A + + A E ++ +
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 388 ENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI 426
GI P + N LL GL + G L E+M R +
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 137/327 (41%), Gaps = 4/327 (1%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCGAGKYDEA 166
G + A+N ++D L K R ++ + ++ G+ ++ T+ ++ + C + ++ +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGDSFAILLEG 226
M + +V+ ++LL A + F V+ +DPD +++ L+ G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 227 WEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCF 286
++EAN+ F MV + V++Y T + + K+V++ +K R M
Sbjct: 305 LCLHDRIDEANQMFDLMVSK--GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 287 PTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEK 346
++ + + D A + + M F G PD TYN++ L N + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFS-QMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 347 FFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEASANELLVGLR 406
F +M K E + T I + + E A ++ + G+ P + ++ GL
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 407 NLGRLSDVRRFAEEMLNRRILIYEVTM 433
G L +V +M ++ + T+
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 1/183 (0%)
Query: 263 TLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAF 322
T +R ++++A+ M FP++ F+ L +VKL + L M V G
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL-GIR 117
Query: 323 PDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEI 382
D T+N++ C +V +M+K ++P + + + + A+ +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 383 WNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFYN 442
+ ++E G P + N ++ L R++D F +E+ + I VT L N
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 443 ESR 445
SR
Sbjct: 238 SSR 240
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 97 SAVDFFRWAGRGQRLSPYAW--NLMVDVLGKNGRFEQMWNAVRVM-KEDGVLSLPTFASI 153
S +DFF +SP W N+++ L NG E+ M K + L + T+ ++
Sbjct: 389 SQMDFFG-------ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 154 FDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQ 195
C GK +EA F +S+ G++ D+V +++S +C +
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 136/328 (41%), Gaps = 7/328 (2%)
Query: 98 AVDFFRWAGRGQRL-SPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIF-D 155
A++ FR + L Y + ++D L K R ++ + M+ +G P ++ D
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 156 SYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVD 214
C G D M + G + V N+L+ +C + + +A+ L R V
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK-GKLDKAVSLLERMVSSKCI 324
Query: 215 PDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL 274
P+ ++ L+ G K+ +A + M ER +H+ Y + L + + +EA+
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI--YSVLISGLFKEGKAEEAM 382
Query: 275 KFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFEC 334
R M + C P + +S +D L + A ++ + M+ G P++ TY+ + +
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN-RMIASGCLPNAYTYSSLMKG 441
Query: 335 LIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPL 394
K E + + EM K + I L + A+ +W+ +L GI P
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 395 EASANELLVGLRNLGRLSDVRRFAEEML 422
+ + ++ GL +G + + EML
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 163/399 (40%), Gaps = 47/399 (11%)
Query: 86 EVLQLSYDSPSSAVDFFRWAGRGQ-RLSPYAWNLMVDVLGKNGRFEQMWNAV-RVMKEDG 143
EV++ ++P S F G +L + M++ +G F+ + + R+ E+
Sbjct: 49 EVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENR 108
Query: 144 VLSLPTFASIFDSYCGAGKYDEAVMSFDVM-SMHGVEQDVVAVNSLLSAICRQENQTSRA 202
V+ +F +F +Y A D+AV F M ++ V + NS+L+ I E R
Sbjct: 109 VIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVII-NEGLYHRG 167
Query: 203 LEFLNRVKKI-----VDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAY 257
LEF + V + P+G SF ++++ K V+ A + F M ER + P+ Y
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPER-KCLPDG-YTY 225
Query: 258 ETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMV 317
T + L + +++DEA+ L M+ E C P+ ++ +D L K D T +L D M
Sbjct: 226 CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVD-NMF 284
Query: 318 FHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLL------ 371
G P+ +TYN + L ++ + M+ ++ P + T I L+
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 372 DA-----------------------------DEPEIAIEIWNYILENGILPLEASANELL 402
DA + E A+ +W + E G P + L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 403 VGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKAFY 441
GL G+ ++ + M+ L T L K F+
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 112/260 (43%), Gaps = 7/260 (2%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+ +++ L K R + M+E G L+ ++ + GK +EA+ + M
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Query: 174 SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR-VKKIVDPDGDSFAILLEGWEKEGN 232
+ G + ++V + L+ +CR E + + A E LNR + P+ +++ L++G+ K G
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCR-EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 233 VEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFF 292
EEA + + EM + + Y + L +V EA+ M P +
Sbjct: 448 CEEAVQVWKEMDK--TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505
Query: 293 SNALDILVKLNDSTHAVQLWDIMMVFH--GAFPDSLTYNMIFECLIKNKRVHEVEKFFHE 350
S+ + L + A++L+ M+ + PD +TYN++ + L K + +
Sbjct: 506 SSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS 565
Query: 351 MIKNEWQPTPLNCATAITML 370
M+ P + C T + L
Sbjct: 566 MLDRGCDPDVITCNTFLNTL 585
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 119/320 (37%), Gaps = 53/320 (16%)
Query: 149 TFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNR 208
T +S+ +SY +G +D +V LLS I R EN+
Sbjct: 79 TLSSMIESYANSGDFD-------------------SVEKLLSRI-RLENRV--------- 109
Query: 209 VKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
I++ SF ++ + K ++A F MV+ F V ++ + L +I
Sbjct: 110 ---IIE---RSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCK-RSVKSFNSVLNVIINEG 162
Query: 269 QVDEALKFLRVMKGEN----CFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHG---- 320
L+F + N P F+ + L KL A++ VF G
Sbjct: 163 LYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIE------VFRGMPER 216
Query: 321 -AFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIA 379
PD TY + + L K +R+ E EM P+P+ I L +
Sbjct: 217 KCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 276
Query: 380 IEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEVTMHKLKKA 439
++ + + G +P E + N L+ GL G+L E M++ + + +VT L
Sbjct: 277 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLING 336
Query: 440 FYNESRSMRDI--FDSLERR 457
+ R+ + S+E R
Sbjct: 337 LVKQRRATDAVRLLSSMEER 356
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 159/377 (42%), Gaps = 58/377 (15%)
Query: 117 NLMVDVLGKNGRFE---QMWNAVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
N+M+ L K GR + ++W R+ + + L T++S+ C AG D+A F+ +
Sbjct: 259 NIMISGLSKCGRVDDCLKIWE--RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 174 SMHGVEQDVVAVNSLLSAICR-----QENQTSRALEFLNRVKKIVDPDGDSFAILLEGWE 228
DVV N++L CR + + R +E N V + S+ IL++G
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV------SYNILIKGLL 370
Query: 229 KEGNVEEA--------------------------------NKTFGEMVERFEWNPEH--V 254
+ G ++EA NK G M E E + H V
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE-VESSGGHLDV 429
Query: 255 LAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK--LNDSTHA-VQL 311
AY + + L + K+++EA ++ M ++ S+ + L+ + DS
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEMSKHG----VELNSHVCNALIGGLIRDSRLGEASF 485
Query: 312 WDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLL 371
+ M +G P ++YN++ L K + E F EM++N W+P + + L
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 372 DADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRILIYEV 431
+ ++A+E+W+ L++G+ N L+ GL ++G+L D M +R V
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 432 TMHKLKKAFYNESRSMR 448
T + L + F+ S R
Sbjct: 606 TYNTLMEGFFKVGDSNR 622
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 153/398 (38%), Gaps = 86/398 (21%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYCG 159
+F AG L Y N+++ + K FE+ + M ++G + +++++ +
Sbjct: 139 YFETAGVAPNLQTY--NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAK 196
Query: 160 AGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV--KKIVDPDG 217
AGK D+A+ FD MS GV DV N L+ ++++ + A+E +R+ V P+
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT-AMELWDRLLEDSSVYPNV 255
Query: 218 DSFAILLEG-------------WEK----------------------EGNVEEANKTFGE 242
+ I++ G WE+ GNV++A F E
Sbjct: 256 KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNE 315
Query: 243 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVK- 301
+ ER V+ Y T L R ++ E+L+ R+M+ +N + + +IL+K
Sbjct: 316 LDERKA--SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSY-----NILIKG 368
Query: 302 -LNDST--HAVQLWDIM-------------MVFH---------------------GAFPD 324
L + A +W +M + H G D
Sbjct: 369 LLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD 428
Query: 325 SLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWN 384
Y I +CL K KR+ E EM K+ + C I L+ A
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 385 YILENGILPLEASANELLVGLRNLGRLSDVRRFAEEML 422
+ +NG P S N L+ GL G+ + F +EML
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 119/294 (40%), Gaps = 47/294 (15%)
Query: 106 GRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE----DGVLSLPTFASIFDSYCGAG 161
+G + + + L NG + A+ VM+E G L + +ASI D C
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNK---ALGVMQEVESSGGHLDVYAYASIIDCLCKKK 443
Query: 162 KYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSF 220
+ +EA MS HGVE + N+L+ + R +++ A FL + K P S+
Sbjct: 444 RLEEASNLVKEMSKHGVELNSHVCNALIGGLIR-DSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 221 AILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEAL----KF 276
IL+ G K G EA+ EM+E W P+ + Y L L R +++D AL +F
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLEN-GWKPD-LKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 277 LRV-------------------------------MKGENCFPTLKFFSNALDILVKLNDS 305
L+ M+ NC L ++ ++ K+ DS
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 306 THAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPT 359
A +W M G PD ++YN I + L + V +FF + + PT
Sbjct: 621 NRATVIWGYMYKM-GLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 152 SIFDSYCGAGKYDEAVMSFDVM-SMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVK 210
S+ +Y D+A+ F M + G E + + N+LL+A + F
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 211 KIVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQV 270
V P+ ++ +L++ K+ E+A + F + + + + P+ V +Y T + L + ++
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKA-RGFLDWMWKEGFKPD-VFSYSTVINDLAKAGKL 200
Query: 271 DEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNM 330
D+AL+ M P + ++ +D +K D A++LWD ++ +P+ T+N+
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 331 IFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENG 390
+ L K RV + K + M +NE + ++ I L DA + A ++N + E
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 391 ILPLEASANELLVGLRNLGRLSD 413
+ N +L G G++ +
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKE 343
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 108/251 (43%), Gaps = 6/251 (2%)
Query: 43 HLDAPYISSSARIICEILAHASSDDIESALACTGIIPTPDLVHEVLQ-LSYDSPSSAVDF 101
HLD +S +C+ + ++ ++ G+ + + ++ L DS F
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 102 F-RWAGR-GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVL-SLPTFASIFDSYC 158
F R G+ G R + ++N+++ L K G+F + V+ M E+G L T++ + C
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 159 GAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDGD 218
K D A+ + G+E DV+ N L+ +C N + +
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 219 SFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLR 278
++ L+EG+ K G+ A +G M + P+ +++Y T + L + V A++F
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMY-KMGLQPD-IISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 279 VMKGENCFPTL 289
+ FPT+
Sbjct: 664 DARNHGIFPTV 674
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 155/354 (43%), Gaps = 42/354 (11%)
Query: 77 IIPTPDLVHEVLQ--LSYDSPSSAVDFFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWN 134
I P+ LVH ++Q L +SP +A++ F N FE W
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIF-----------------------NDSFES-WI 446
Query: 135 AVRVMKEDGVLSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICR 194
A M IF +C GK D A +M G+E +VV N+++ A CR
Sbjct: 447 AHGFMCN----------KIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCR 496
Query: 195 QENQTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEGNVEEANKTFGEM-VERFEWNPEH 253
+N F ++K ++P+ +++IL++G+ K + + A +M FE N
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE-- 554
Query: 254 VLAYETFLITLIRGKQVDEALKFLRVMKGENCFP-TLKFFSNALDILVKLNDSTHAVQLW 312
+ Y T + L + Q +A + L+ + E + + +++ +D VK+ D+ AV+ +
Sbjct: 555 -VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETY 613
Query: 313 DIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLD 372
M +G P+ +T+ + K+ R+ + HEM E + I
Sbjct: 614 R-EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCK 672
Query: 373 ADEPEIAIEIWNYILENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRI 426
++ + A +++ + E G++P + N L+ G RNLG++ ++M+N I
Sbjct: 673 KNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 132/286 (46%), Gaps = 5/286 (1%)
Query: 108 GQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLS-LPTFASIFDSYCGAGKYDEA 166
G L+P A+N +++ +N R + + +M + V+ +P ++ S + DEA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 167 VMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV-KKIVDPDGDSFAILLE 225
++ M + GV D V L+ A R E + A++ RV + +PDG F++ ++
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLR-ERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ 282
Query: 226 GWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENC 285
K ++ A EM + P Y + ++ ++ ++EA++ + M G
Sbjct: 283 AACKTPDLVMALDLLREMRGKLGV-PASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGI 341
Query: 286 FPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVE 345
++ ++ ++ K N+ A+ L++ M G PD + ++++ E KN + +
Sbjct: 342 PMSVIAATSLVNGYCKGNELGKALDLFN-RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAI 400
Query: 346 KFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGI 391
+F+ M P+ + T I L A+ PE A+EI+N E+ I
Sbjct: 401 EFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI 446
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 143/339 (42%), Gaps = 17/339 (5%)
Query: 95 PSSAVDFFRWA-GRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLP----T 149
P AV FR RG ++L V K + +R M+ G L +P T
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMR--GKLGVPASQET 312
Query: 150 FASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRV 209
+ S+ ++ G +EAV D M G+ V+A SL++ C+ N+ +AL+ NR+
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKG-NELGKALDLFNRM 371
Query: 210 KK-IVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGK 268
++ + PD F++++E + K +E+A + + M + P VL + T + ++ +
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM-KSVRIAPSSVLVH-TMIQGCLKAE 429
Query: 269 QVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTY 328
+ AL+ + F N + +L A + MM G P+ + Y
Sbjct: 430 SPEAALEIFN--DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFY 487
Query: 329 N--MIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYI 386
N M+ C +KN + F EM++ +P + I + + A ++ N +
Sbjct: 488 NNMMLAHCRMKNMDL--ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM 545
Query: 387 LENGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRR 425
+ E N ++ GL +G+ S + + ++ +
Sbjct: 546 NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 115 AWNLMVDVLGKNGRFEQMWNAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVM 173
+N ++ G+ + + + M DG+ L T+ ++ D G + A + +
Sbjct: 697 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Query: 174 SMHGVEQDVVAVNSLLSAICRQEN--QTSRALEFLNRVKKIVDPDGDSFAILLEGWEKEG 231
G+ D + L++ + ++ + S+ LE + KK V P+ ++ ++ G +EG
Sbjct: 757 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMK--KKDVTPNVLLYSTVIAGHHREG 814
Query: 232 NVEEANKTFGEMVER 246
N+ EA + EM+E+
Sbjct: 815 NLNEAFRLHDEMLEK 829
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 131/292 (44%), Gaps = 38/292 (13%)
Query: 101 FFRWAGRGQRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKE---DGVLSL---------- 147
F R G R + Y ++L++++L G+ ++ V + K G+ S
Sbjct: 328 FSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGH 387
Query: 148 --------------------PTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNS 187
++ S+ +S CGAGK EA+ + GV D + N+
Sbjct: 388 VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 188 LLSAICRQENQTSRALEFLNRVKK-IVDPDGDSFAILLEGWEKEGNVEEANKTFGEMVER 246
+ SA+ + + Q S + ++KK PD ++ IL+ + + G V+EA F E+ ER
Sbjct: 448 VFSALGKLK-QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL-ER 505
Query: 247 FEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKLNDST 306
+ P+ +++Y + + L + VDEA + M+ + P + +S ++ K
Sbjct: 506 SDCKPD-IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 307 HAVQLWDIMMVFHGAFPDSLTYNMIFECLIKNKRVHEVEKFFHEMIKNEWQP 358
A L++ M+V G P+ +TYN++ +CL KN R E + +M + P
Sbjct: 565 MAYSLFEEMLV-KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 171/427 (40%), Gaps = 62/427 (14%)
Query: 80 TPDLVHEVLQLSYDSPSSAVDFFRWAGRGQRLSPYA------WNLMVDVLGKN------- 126
TPD E+L+ S +SP AV+FF+ L PY+ +N ++ +L ++
Sbjct: 98 TPDEASEILK-SLNSPLLAVEFFKLV---PSLCPYSQNDPFLYNRIILILSRSNLPDRFD 153
Query: 127 ----------------------------GRFEQMWNAVRVMKE-DGVLSLPTFASIFDSY 157
G E + +R++K+ D ++ T+ + +Y
Sbjct: 154 RVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAY 213
Query: 158 CGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAICRQENQTSRALEFLNRVKKIVDPDG 217
+ Y +A + + G + D+ A N LL A+ + E F + K+ D
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQ---VFEDMKKRHCRRDE 270
Query: 218 DSFAILLEGWEKEGNVEEANKTFGEMVERFEWNPEHVLAYETFLITLIRGKQVDEALKFL 277
++ I++ + G +EA F EM+ E +V+ Y T + L +GK VD+A++
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMIT--EGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 278 RVMKGENCFPTLKFFSNALDILVKLNDSTHAVQLWDIMMVFHGAFPDSLTYNMIFECLIK 337
M C P +S L++LV V+L ++ + + Y+ + L K
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVA---EGQLVRLDGVVEISKRYMTQGI-YSYLVRTLSK 384
Query: 338 NKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILENGILPLEAS 397
V E + F +M + + + + L A + AIE+ + I E G++
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 398 ANELLVGLRNLGRLSDVRRFAEEMLNRR----ILIYEVTMHKLKKAFYNESRSMRDIFDS 453
N + L L ++S + E+M I Y + + + E +IF+
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV--GEVDEAINIFEE 502
Query: 454 LERR-CK 459
LER CK
Sbjct: 503 LERSDCK 509
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 160/423 (37%), Gaps = 74/423 (17%)
Query: 96 SSAVDFFRWAGRG-QRLSPYAWNLMVDVLGKNGRFEQMWNAVRVMKEDGVLSLPTFASIF 154
S A D + RG +L +A+N+++D L K+ + Q++ ++ K T+ +
Sbjct: 220 SKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMK--KRHCRRDEYTYTIMI 277
Query: 155 DSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAI--------------------CR 194
+ GK DEAV F+ M G+ +VV N+L+ + CR
Sbjct: 278 RTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR 337
Query: 195 QENQT-SRALEFLNRVKKIVDPDG-----------DSFAILLEGWEKEGNVEEANKTFGE 242
T S L L ++V DG ++ L+ K G+V EA++ F +
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCD 397
Query: 243 MVERFEWNPEHVLAYETFLITLIRGKQVDEALKFLRVMKGENCFPTLKFFSNALDILVKL 302
M F E +Y + L +L + EA++ L + + ++ L KL
Sbjct: 398 MWS-FPVKGERD-SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKL 455
Query: 303 NDSTHAVQL---------------WDIMMVFHGAF-------------------PDSLTY 328
+H L ++I++ G PD ++Y
Sbjct: 456 KQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISY 515
Query: 329 NMIFECLIKNKRVHEVEKFFHEMIKNEWQPTPLNCATAITMLLDADEPEIAIEIWNYILE 388
N + CL KN V E F EM + P + +T + + E+A ++ +L
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV 575
Query: 389 NGILPLEASANELLVGLRNLGRLSDVRRFAEEMLNRRIL---IYEVTMHKLKKAFYNESR 445
G P + N LL L GR ++ +M + + I + +L+ + +SR
Sbjct: 576 KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSR 635
Query: 446 SMR 448
R
Sbjct: 636 IRR 638
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 79 PTPDL-VHEVLQLSYDSPSS---AVDFFRWAGRGQ-RLSPYAWNLMVDVLGKNGRFEQMW 133
P+PD+ + +L S+ A++ F R + ++N +++ LGKNG ++
Sbjct: 473 PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 134 NAVRVMKEDGV-LSLPTFASIFDSYCGAGKYDEAVMSFDVMSMHGVEQDVVAVNSLLSAI 192
+ M+E G+ + T++++ + + + + A F+ M + G + ++V N LL +
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 193 CRQENQTSRALEFLNRVKKI-VDPDGDSFAIL 223
+ +T+ A++ +++K+ + PD ++ +L
Sbjct: 593 -EKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,000,070
Number of Sequences: 539616
Number of extensions: 7198848
Number of successful extensions: 24133
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 20840
Number of HSP's gapped (non-prelim): 1572
length of query: 463
length of database: 191,569,459
effective HSP length: 121
effective length of query: 342
effective length of database: 126,275,923
effective search space: 43186365666
effective search space used: 43186365666
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)