Query 012447
Match_columns 463
No_of_seqs 193 out of 1094
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 09:38:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012447.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012447hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 4E-147 1E-151 1210.2 36.3 431 27-462 39-489 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 2E-140 7E-145 1161.2 39.0 442 17-462 1-449 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 8E-136 3E-140 1121.5 34.2 422 26-462 4-425 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 4E-132 1E-136 1092.6 34.3 411 27-462 4-414 (796)
5 3vue_A GBSS-I, granule-bound s 92.7 0.32 1.1E-05 51.4 9.2 30 138-167 25-54 (536)
6 3s4e_A Dual specificity protei 38.5 43 0.0015 28.2 5.3 37 332-372 82-121 (144)
7 3emu_A Leucine rich repeat and 37.4 39 0.0013 29.4 4.9 37 332-372 88-127 (161)
8 1uqt_A Alpha, alpha-trehalose- 37.2 27 0.00094 36.2 4.5 55 332-407 123-177 (482)
9 3ezz_A Dual specificity protei 34.6 55 0.0019 27.4 5.3 38 332-373 82-122 (144)
10 3t5t_A Putative glycosyltransf 29.8 77 0.0026 33.4 6.4 67 332-419 149-230 (496)
11 2k84_A P9; HOST-virus interact 27.8 18 0.00061 23.9 0.7 14 286-306 1-14 (30)
12 3u7q_B Nitrogenase molybdenum- 23.4 4.3E+02 0.015 27.7 10.8 135 15-163 308-470 (523)
13 2j16_A SDP-1, tyrosine-protein 23.1 98 0.0034 27.8 5.1 37 332-372 118-157 (182)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=4.1e-147 Score=1210.19 Aligned_cols=431 Identities=48% Similarity=0.837 Sum_probs=413.5
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEechhcccchhHHHhhc
Q 012447 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (463)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~~~~~~~at~~~~y~Ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEFl~Gr~L~nnL~N 106 (463)
+++++|++.|.+||++++|+++.+||+.++|.|||.+|||+|+++|.+|++.|.+.++|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEEchhhhhhhHHHHHHHh
Confidence 67799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHH-------------HHHHHHcCCCHHHHHhhhcccCCCCCCcccchhhhHhhhhccCCCeEEEEeccCCcceEE
Q 012447 107 LDIQNAY-------------ADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQ 173 (463)
Q Consensus 107 Lgl~~~~-------------~e~l~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~AtLglP~~G~GirY~yG~FkQ 173 (463)
||+++++ +++|+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred cCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeeeeecccccccCCCccccccCeEEEEEECCeEee--cC-CCcee--eeCCeeEEEEEeeeccCCCCCCceEEEE
Q 012447 174 KITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV--NP-NGTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (463)
Q Consensus 174 ~i~dG~QvE~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~--~~-~g~~~--w~~~~~V~av~yD~pi~Gy~~~~vn~LR 248 (463)
+|.||||+|.||+||.+|||||++|++.+++|+|+|+++. +. +|+.+ |++++.|+|||||+|||||+|+++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEE
Confidence 9999999999999999999999999999999999999983 44 78653 9999999999999999999999999999
Q ss_pred EEeeecCcccccccccCCcchhHHHhhhhhhhcccccccCCCCccccchhhhhhhhhhhhccHHHHHHHHHHhcCCCccc
Q 012447 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 328 (463)
Q Consensus 249 LW~a~v~~~~f~l~~~~~g~y~~a~~~~~~~e~It~~LYp~Ds~~~Gk~lRLkQeyfl~sa~lqdiir~~~~~~~~~~l~ 328 (463)
||+|+++ ..|||..||.|+|.+|+++++.+|+||++|||+|++++||+|||||||||||||+|||||+|++.+ .+|+
T Consensus 279 LW~a~~~-~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~--~~l~ 355 (879)
T 1ygp_A 279 LWQARPT-TEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSK--RPWT 355 (879)
T ss_dssp EEEEEES-CSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CCGG
T ss_pred EEEeccC-cccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHHHHHHHHHhC--CChh
Confidence 9999955 489999999999999999999999999999999999999999999999999999999999999887 4799
Q ss_pred CCCCceeEeecCCcccchHHHHHHHHHHhcCCCHHHHHHhhccceEEeeccccccccccccHHHHHHhchHHHHHHHHHH
Q 012447 329 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 408 (463)
Q Consensus 329 ~l~~~~~ihlNDtHPalai~ELmR~L~de~gl~wd~A~~i~~~~~~yTnHT~lpealE~wp~~l~~~llpr~~~II~eIn 408 (463)
.||++++|||||||||||||||||+|+|++|++||+||+||++||+||||||||||||+||++||+++||||++||++||
T Consensus 356 ~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein 435 (879)
T 1ygp_A 356 EFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDIN 435 (879)
T ss_dssp GHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCChhhhcccccccCCCCCC--eeehhHHhHhhCCccceeccccc
Q 012447 409 KRFIAMVRSTRSDLESKIPSMCILDNNPKKP--VVRMANLCVVSAHTVRGLFLELL 462 (463)
Q Consensus 409 ~rf~~~~~~~~~~d~~~~~~l~ii~~~~~~~--~v~Ma~Lai~~S~~vNGVs~l~~ 462 (463)
++|++.++.++|+|.+++.+||||++ +++ +||||+|||++||+|||||+||.
T Consensus 436 ~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ 489 (879)
T 1ygp_A 436 WFFLEDVAKKFPKDVDLLSRISIIEE--NSPERQIRMAFLAIVGSHKVNGVVELHS 489 (879)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHCSEEC--CSSSCEEEHHHHHHHHEEEEEESSHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHhcceecc--CCCcceeehHHHHHHhcCceeEehHHHH
Confidence 99999999999999999999999987 433 89999999999999999999995
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=2.1e-140 Score=1161.23 Aligned_cols=442 Identities=46% Similarity=0.799 Sum_probs=412.4
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEechhcc
Q 012447 17 KIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQ 96 (463)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~at~~~~y~Ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEFl~ 96 (463)
||++++.....++++|+++|.+||++++|+++.+||++++|.|||.+|||+++++|.+|++.+.++++|+||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~ 80 (824)
T 2gj4_A 1 QISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYM 80 (824)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEE
T ss_pred CcccccccccccHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEchhhcc
Confidence 46777654445678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHhhcCCcHHHHHHHHHHcCCCHHHHHhhhcccCCCCCCcccchhhhHhhhhccCCCeEEEEeccCCcceEEEEe
Q 012447 97 GRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKIT 176 (463)
Q Consensus 97 Gr~L~nnL~NLgl~~~~~e~l~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~AtLglP~~G~GirY~yG~FkQ~i~ 176 (463)
||+|.|||+|||++++++++|+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+
T Consensus 81 gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~ 160 (824)
T 2gj4_A 81 GRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC 160 (824)
T ss_dssp ECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE
T ss_pred hhhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeecccccccCCCccccccCeEEEEEECCeEeecCCCceeeeCCeeEEEEEeeeccCCCCCCceEEEEEEeeecCc
Q 012447 177 KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASA 256 (463)
Q Consensus 177 dG~QvE~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~~~~g~~~w~~~~~V~av~yD~pi~Gy~~~~vn~LRLW~a~v~~ 256 (463)
||||+|.||+||+.++|||++|++.+++|+|+|+++.+.+|. +|++++.|+|||||+|||||+|++||+||||+|+ ++
T Consensus 161 dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~ 238 (824)
T 2gj4_A 161 GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-AP 238 (824)
T ss_dssp TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CC
T ss_pred CCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEeeccCCcCCCCCCceEEEEEEEee-cC
Confidence 999999999999999999999999999999999998667783 6999999999999999999999999999999999 78
Q ss_pred ccccccccCCcchhHHHhhhhhhhcccccccCCCCccccchhhhhhhhhhhhccHHHHHHHHHHhc-CC-----CcccCC
Q 012447 257 EDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK-SG-----RQWSEF 330 (463)
Q Consensus 257 ~~f~l~~~~~g~y~~a~~~~~~~e~It~~LYp~Ds~~~Gk~lRLkQeyfl~sa~lqdiir~~~~~~-~~-----~~l~~l 330 (463)
+.|||..||.|+|..|+.+++.+++||++|||+|++++||+|||||||||||||+|||||+|++.+ |. .+|+.|
T Consensus 239 ~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~ 318 (824)
T 2gj4_A 239 NDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAF 318 (824)
T ss_dssp C----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGH
T ss_pred cccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhc
Confidence 899999999999999999999999999999999999999999999999999999999999998653 10 268899
Q ss_pred CCceeEeecCCcccchHHHHHHHHHHhcCCCHHHHHHhhccceEEeeccccccccccccHHHHHHhchHHHHHHHHHHHH
Q 012447 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (463)
Q Consensus 331 ~~~~~ihlNDtHPalai~ELmR~L~de~gl~wd~A~~i~~~~~~yTnHT~lpealE~wp~~l~~~llpr~~~II~eIn~r 410 (463)
|++++||+|||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++
T Consensus 319 ~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~ 398 (824)
T 2gj4_A 319 PDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCChhhhcccccccCCCC-CCeeehhHHhHhhCCccceeccccc
Q 012447 411 FIAMVRSTRSDLESKIPSMCILDNNPK-KPVVRMANLCVVSAHTVRGLFLELL 462 (463)
Q Consensus 411 f~~~~~~~~~~d~~~~~~l~ii~~~~~-~~~v~Ma~Lai~~S~~vNGVs~l~~ 462 (463)
|++.++.++|++.+++.+|+++++ + .++||||+|||++||+|||||+||.
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~--~~~~~vnMa~lai~~S~~VNgVS~lH~ 449 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEE--GAVKRINMAHLCIAGSHAVNGVARIHS 449 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEEC--SSSCEEEHHHHHHHTCSCEEESSHHHH
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhh--cCCCcccHHHHHHHhcCceeeEcHHHH
Confidence 999999999999999999999986 3 2499999999999999999999995
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=8.4e-136 Score=1121.46 Aligned_cols=422 Identities=39% Similarity=0.645 Sum_probs=409.4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEechhcccchhHHHhh
Q 012447 26 ANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIG 105 (463)
Q Consensus 26 ~~~~~~~~~~~~~~l~~~~~~~~~~at~~~~y~Ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEFl~Gr~L~nnL~ 105 (463)
..++++|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++ .++|+||||||||||||+|.|||+
T Consensus 4 ~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l~ 79 (796)
T 1l5w_A 4 IFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNLL 79 (796)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhCCChHhCCHHHHHHHHHHHHHHHHHHHHHHhcc----cCCceEEEEehHHhHHHHHHHHHH
Confidence 4588999999999999999999999999999999999999999999999996 468999999999999999999999
Q ss_pred cCCcHHHHHHHHHHcCCCHHHHHhhhcccCCCCCCcccchhhhHhhhhccCCCeEEEEeccCCcceEEEEeCCeeeeecc
Q 012447 106 SLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAE 185 (463)
Q Consensus 106 NLgl~~~~~e~l~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~AtLglP~~G~GirY~yG~FkQ~i~dG~QvE~pd 185 (463)
|||++++++++|+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||
T Consensus 80 nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d 159 (796)
T 1l5w_A 80 NLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPD 159 (796)
T ss_dssp HHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECC
T ss_pred hcCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccccccCeEEEEEECCeEeecCCCceeeeCCeeEEEEEeeeccCCCCCCceEEEEEEeeecCcccccccccC
Q 012447 186 DWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFN 265 (463)
Q Consensus 186 ~Wl~~~~pwe~~r~~~~~~V~f~G~~~~~~~g~~~w~~~~~V~av~yD~pi~Gy~~~~vn~LRLW~a~v~~~~f~l~~~~ 265 (463)
+|++.++|||++|++.+++|+|+|+++. + + +|+++++|+|||||+|||||+|+++|+||||+|+++. .|||..||
T Consensus 160 ~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~fn 234 (796)
T 1l5w_A 160 DWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFN 234 (796)
T ss_dssp CCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS-CCCHHHHH
T ss_pred ccccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc-ccChhhcC
Confidence 9999999999999999999999999983 2 3 6999999999999999999999999999999999554 79999999
Q ss_pred CcchhHHHhhhhhhhcccccccCCCCccccchhhhhhhhhhhhccHHHHHHHHHHhcCCCcccCCCCceeEeecCCcccc
Q 012447 266 DGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTL 345 (463)
Q Consensus 266 ~g~y~~a~~~~~~~e~It~~LYp~Ds~~~Gk~lRLkQeyfl~sa~lqdiir~~~~~~~~~~l~~l~~~~~ihlNDtHPal 345 (463)
.|+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+ .+|+.|+++++||+|||||||
T Consensus 235 ~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~--~~~~~l~~p~viHlNDtHpal 312 (796)
T 1l5w_A 235 DGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELADYEVIQLNDTHPTI 312 (796)
T ss_dssp TTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTT
T ss_pred CccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcC--CChhhcCCccEEEecCCccHh
Confidence 999999999999999999999999999999999999999999999999999999887 479899999999999999999
Q ss_pred hHHHHHHHHHHhcCCCHHHHHHhhccceEEeeccccccccccccHHHHHHhchHHHHHHHHHHHHHHHHHHhhCCCChhh
Q 012447 346 AIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESK 425 (463)
Q Consensus 346 ai~ELmR~L~de~gl~wd~A~~i~~~~~~yTnHT~lpealE~wp~~l~~~llpr~~~II~eIn~rf~~~~~~~~~~d~~~ 425 (463)
++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||+||++++..++|.|.++
T Consensus 313 ~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~ 392 (796)
T 1l5w_A 313 AIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKV 392 (796)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccCCCCCCeeehhHHhHhhCCccceeccccc
Q 012447 426 IPSMCILDNNPKKPVVRMANLCVVSAHTVRGLFLELL 462 (463)
Q Consensus 426 ~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVs~l~~ 462 (463)
+.+++++++ ++||||+|||++||+|||||+||.
T Consensus 393 ~~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lH~ 425 (796)
T 1l5w_A 393 WAKLAVVHD----KQVHMANLCVVGGFAVNGVAALHS 425 (796)
T ss_dssp HHHHCSEET----TEEEHHHHHHHHSSEEEESSHHHH
T ss_pred HhhhhcccC----CcccHHHHHHHhcCccccccHHHH
Confidence 999999876 499999999999999999999995
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=3.6e-132 Score=1092.63 Aligned_cols=411 Identities=41% Similarity=0.654 Sum_probs=397.5
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEechhcccchhHHHhhc
Q 012447 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (463)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~~~~~~~at~~~~y~Ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEFl~Gr~L~nnL~N 106 (463)
.+++.|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++.+.+. |+||||||||||||+|.|||+|
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~n 81 (796)
T 2c4m_A 4 EKQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTN 81 (796)
T ss_dssp --CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHHCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CeEEEEehhhcchhhhhhHHHh
Confidence 34567999999999999999999999999999999999999999999999988654 9999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCHHHHHhhhcccCCCCCCcccchhhhHhhhhccCCCeEEEEeccCCcceEEEEeCCeeeeeccc
Q 012447 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (463)
Q Consensus 107 Lgl~~~~~e~l~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~AtLglP~~G~GirY~yG~FkQ~i~dG~QvE~pd~ 186 (463)
||++++++++|+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 82 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~ 161 (796)
T 2c4m_A 82 LGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDP 161 (796)
T ss_dssp TTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccccCeEEEEEECCeEeecCCCceeeeCCeeEEEEEeeeccCCCCCCceEEEEEEeeecCcccccccccCC
Q 012447 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (463)
Q Consensus 187 Wl~~~~pwe~~r~~~~~~V~f~G~~~~~~~g~~~w~~~~~V~av~yD~pi~Gy~~~~vn~LRLW~a~v~~~~f~l~~~~~ 266 (463)
|++.|+|||++|++.+++|+|+|+ +|+|||||+|||||+|+++|+||||+|+ +...|||..||.
T Consensus 162 wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~-~~~~f~l~~fn~ 225 (796)
T 2c4m_A 162 WREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAE-PWEEFDYDAFNA 225 (796)
T ss_dssp SSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEE-ESSSSCHHHHHT
T ss_pred cccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEecc-cccccchhhccC
Confidence 999999999999999999999996 5789999999999999999999999999 445899999999
Q ss_pred cchhHHHhhhhhhhcccccccCCCCccccchhhhhhhhhhhhccHHHHHHHHHHhcCCCcccCCCCceeEeecCCcccch
Q 012447 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (463)
Q Consensus 267 g~y~~a~~~~~~~e~It~~LYp~Ds~~~Gk~lRLkQeyfl~sa~lqdiir~~~~~~~~~~l~~l~~~~~ihlNDtHPala 346 (463)
|+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.++ +|+.|+++++||+|||||||+
T Consensus 226 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~l~~l~~p~viHlNDtHpal~ 303 (796)
T 2c4m_A 226 QRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK--DLSNFAEFHSVQLNDTHPVLA 303 (796)
T ss_dssp TCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CSTTHHHHEEEEEESSTTTTH
T ss_pred cchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC--ChhhcCCCeEEEeCCChHHhH
Confidence 999999999999999999999999999999999999999999999999999998874 799999999999999999999
Q ss_pred HHHHHHHHHHhcCCCHHHHHHhhccceEEeeccccccccccccHHHHHHhchHHHHHHHHHHHHHHHHHHhhCCCChhhh
Q 012447 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (463)
Q Consensus 347 i~ELmR~L~de~gl~wd~A~~i~~~~~~yTnHT~lpealE~wp~~l~~~llpr~~~II~eIn~rf~~~~~~~~~~d~~~~ 426 (463)
+|||||+|+|++|++|++||+||+++|+||||||+|||||+||++||+++||||++||++||++|+.++..+ |.|.+++
T Consensus 304 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~ 382 (796)
T 2c4m_A 304 IPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETI 382 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhc-CCcHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccccccCCCCCCeeehhHHhHhhCCccceeccccc
Q 012447 427 PSMCILDNNPKKPVVRMANLCVVSAHTVRGLFLELL 462 (463)
Q Consensus 427 ~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVs~l~~ 462 (463)
.+++++++ ++||||+|||++||+|||||+||.
T Consensus 383 ~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lHa 414 (796)
T 2c4m_A 383 NRMAPIQH----GTVHMAWIACYAAYSINGVAALHT 414 (796)
T ss_dssp HHHCSEET----TEEEHHHHHHHHCSEEEESSHHHH
T ss_pred hcccceeC----CcccHHHHHHHhcCceeeccHHHH
Confidence 99999876 499999999999999999999995
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.73 E-value=0.32 Score=51.39 Aligned_cols=30 Identities=27% Similarity=0.339 Sum_probs=26.0
Q ss_pred CCCcccchhhhHhhhhccCCCeEEEEeccC
Q 012447 138 NGGLGRLASCFLDSMATLNLPAWGYGLRYR 167 (463)
Q Consensus 138 nGGLGrLAacfldS~AtLglP~~G~GirY~ 167 (463)
.||||.-++..=++++.+|.-+.-+-=.|.
T Consensus 25 ~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~ 54 (536)
T 3vue_A 25 TGGLGDVLGGLPPAMAANGHRVMVISPRYD 54 (536)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEEECCS
T ss_pred cCcHHHHHHHHHHHHHHcCCeEEEEecCch
Confidence 799999999999999999998887766664
No 6
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=38.47 E-value=43 Score=28.16 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=30.5
Q ss_pred CceeEeecCCc---ccchHHHHHHHHHHhcCCCHHHHHHhhccc
Q 012447 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (463)
Q Consensus 332 ~~~~ihlNDtH---Palai~ELmR~L~de~gl~wd~A~~i~~~~ 372 (463)
.++.||..-+. +++++.-||+ .+|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLMN----SEQTSFTSAFSLVKNA 121 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHH----HHCCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 57999999998 7777777765 4699999999988774
No 7
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=37.38 E-value=39 Score=29.37 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=31.3
Q ss_pred CceeEeecCCc---ccchHHHHHHHHHHhcCCCHHHHHHhhccc
Q 012447 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (463)
Q Consensus 332 ~~~~ihlNDtH---Palai~ELmR~L~de~gl~wd~A~~i~~~~ 372 (463)
.++.||..-+. +++++.-||+ .+|+++++|++.+++.
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm~----~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLMY----YQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHH----HhCCCHHHHHHHHHHH
Confidence 57899999998 7888877775 4799999999999874
No 8
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=37.19 E-value=27 Score=36.24 Aligned_cols=55 Identities=16% Similarity=0.318 Sum_probs=35.9
Q ss_pred CceeEeecCCcccchHHHHHHHHHHhcCCCHHHHHHhhccceEEeeccccccccccccHHHHHHhchHHHHHHHHH
Q 012447 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEI 407 (463)
Q Consensus 332 ~~~~ihlNDtHPalai~ELmR~L~de~gl~wd~A~~i~~~~~~yTnHT~lpealE~wp~~l~~~llpr~~~II~eI 407 (463)
+..+||++|-|+ +.+|.++|.+. ....++||.|||.|. ..+-+.+|.+-+|+..+
T Consensus 123 ~~DiV~vHdyhl-~~l~~~lr~~~-------------~~~~i~~~~H~pfp~-------~~~~~~lp~~~~il~~l 177 (482)
T 1uqt_A 123 DDDIIWIHDYHL-LPFAHELRKRG-------------VNNRIGFFLHIPFPT-------PEIFNALPTYDTLLEQL 177 (482)
T ss_dssp TTCEEEEESGGG-TTHHHHHHHTT-------------CCSCEEEECCSCCCC-------HHHHTTSTTHHHHHHHH
T ss_pred CCCEEEEECchH-HHHHHHHHHhC-------------CCCcEEEEEcCCCCC-------HHHHhhCccHHHHHHhh
Confidence 457999999997 45666777642 145689999998553 22333566666665433
No 9
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=34.58 E-value=55 Score=27.36 Aligned_cols=38 Identities=18% Similarity=0.296 Sum_probs=30.3
Q ss_pred CceeEeecCCc---ccchHHHHHHHHHHhcCCCHHHHHHhhccce
Q 012447 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRTV 373 (463)
Q Consensus 332 ~~~~ihlNDtH---Palai~ELmR~L~de~gl~wd~A~~i~~~~~ 373 (463)
.++.||..-+. +++++.-|| ...|+++++|++.+++.-
T Consensus 82 ~~VlVHC~~G~~RS~~~~~aylm----~~~~~~~~~A~~~v~~~R 122 (144)
T 3ezz_A 82 GRVLVHSQAGISRSATICLAYLM----MKKRVRLEEAFEFVKQRR 122 (144)
T ss_dssp CCEEEEESSSSSHHHHHHHHHHH----HHHTCCHHHHHHHHHTTC
T ss_pred CeEEEECCCCCChhHHHHHHHHH----HHcCCCHHHHHHHHHHHC
Confidence 58999999987 566666665 457999999999998753
No 10
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=29.85 E-value=77 Score=33.41 Aligned_cols=67 Identities=19% Similarity=0.396 Sum_probs=49.5
Q ss_pred CceeEeecCCcccchHHHHHHHHHHhcCCCHHHHHHhhccceEEeeccccccccccccHHHHHHhchHH--HHHHH----
Q 012447 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRH--MEIIE---- 405 (463)
Q Consensus 332 ~~~~ihlNDtHPalai~ELmR~L~de~gl~wd~A~~i~~~~~~yTnHT~lpealE~wp~~l~~~llpr~--~~II~---- 405 (463)
+-.+|-++|-|+. .+|.++|.+.. ...+.|--||| ||..-+-+.||+| -+|+.
T Consensus 149 ~~D~VwVhDYhL~-llp~~lR~~~~-------------~~~igfFlHiP-------fPs~e~f~~Lp~~~r~ell~gll~ 207 (496)
T 3t5t_A 149 ADPVYLVHDYQLV-GVPALLREQRP-------------DAPILLFVHIP-------WPSADYWRILPKEIRTGILHGMLP 207 (496)
T ss_dssp SSCEEEEESGGGT-THHHHHHHHCT-------------TSCEEEECCSC-------CCCHHHHTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEeCccHh-HHHHHHHhhCC-------------CCeEEEEEcCC-------CCCHHHHhhCcHhHHHHHHHHHHh
Confidence 4567889999974 46788888652 57899999999 5556666778876 66776
Q ss_pred ---------HHHHHHHHHHHhhC
Q 012447 406 ---------EIDKRFIAMVRSTR 419 (463)
Q Consensus 406 ---------eIn~rf~~~~~~~~ 419 (463)
+-=+.|++.....+
T Consensus 208 ~DligF~t~~y~~~Fl~~~~r~l 230 (496)
T 3t5t_A 208 ATTIGFFADRWCRNFLESVADLL 230 (496)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHC
T ss_pred CCEEEEecHHHHHHHHHHHHHHh
Confidence 44467888777776
No 11
>2k84_A P9; HOST-virus interaction, metal-binding, virion, zinc, zinc-finger; NMR {Synthetic}
Probab=27.78 E-value=18 Score=23.95 Aligned_cols=14 Identities=36% Similarity=0.740 Sum_probs=11.0
Q ss_pred ccCCCCccccchhhhhhhhhh
Q 012447 286 LYPGDSTEEGKLLRLKQQFFL 306 (463)
Q Consensus 286 LYp~Ds~~~Gk~lRLkQeyfl 306 (463)
|||+=| .+||||=.
T Consensus 1 LYPDLs-------~~kqEY~v 14 (30)
T 2k84_A 1 LYPDLS-------EIKKEYNV 14 (30)
T ss_dssp CCCCSC-------SSSHHHHH
T ss_pred CCccHH-------HHHHHHhH
Confidence 799987 77999843
No 12
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=23.38 E-value=4.3e+02 Score=27.67 Aligned_cols=135 Identities=13% Similarity=0.029 Sum_probs=76.6
Q ss_pred hccccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCceEEEEechh
Q 012447 15 LAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEF 94 (463)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~at~~~~y~Ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlSmEF 94 (463)
+-.||.-..+.++..+.. ..|.+.|...+|++..+ . + ..=|.++.+.-.+++.+. ..|+|..+. +=
T Consensus 308 ~~GiP~i~~~~PiG~~~T-~~~l~~la~~~g~~~~~----~----i-~~er~r~~~~l~d~~~~l---~GKrvaI~g-d~ 373 (523)
T 3u7q_B 308 TWKHEVPKLNIPMGLDWT-DEFLMKVSEISGQPIPA----S----L-TKERGRLVDMMTDSHTWL---HGKRFALWG-DP 373 (523)
T ss_dssp TSCCCCCCCCCSCHHHHH-HHHHHHHHHHHCCCCCH----H----H-HHHHHHHHHHHHHHHHHH---TTCEEEEEC-SH
T ss_pred HhCCCeeecCCcCCHHHH-HHHHHHHHHHHCCChhH----H----H-HHHHHHHHHHHHHHHHhc---CCCEEEEEC-Cc
Confidence 346777654444544332 33666666667776521 1 1 112233333333344333 457888764 22
Q ss_pred cccchhHHHhhcCCc--------------HHHHHHHHHHc----------CCCHHHHHh----hhcccCCCCCCcccchh
Q 012447 95 LQGRTLTNAIGSLDI--------------QNAYADALNNL----------GHVLEEIAE----QEKDAALGNGGLGRLAS 146 (463)
Q Consensus 95 l~Gr~L~nnL~NLgl--------------~~~~~e~l~~l----------g~~l~~i~~----~E~D~~LgnGGLGrLAa 146 (463)
..-..|..-|.-||+ .+.+++.|+++ |-|+.++++ ..+|.-+|++-=-.+|-
T Consensus 374 ~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~~~pDLlig~s~~k~~a~ 453 (523)
T 3u7q_B 374 DFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSYGKFIQR 453 (523)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHTCCSEEEECTTHHHHHH
T ss_pred hHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHhcCCCEEEECccHHHHHH
Confidence 222234445556774 24466777752 447777665 47999999875445666
Q ss_pred hhHhhhhccCCCeEEEE
Q 012447 147 CFLDSMATLNLPAWGYG 163 (463)
Q Consensus 147 cfldS~AtLglP~~G~G 163 (463)
..+-++..+|+|.+-+|
T Consensus 454 ~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 454 DTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHCGGGCCCEEECS
T ss_pred HhhcccccCCCceEEec
Confidence 66678889999987665
No 13
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=23.09 E-value=98 Score=27.81 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=29.9
Q ss_pred CceeEeecCCc---ccchHHHHHHHHHHhcCCCHHHHHHhhccc
Q 012447 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (463)
Q Consensus 332 ~~~~ihlNDtH---Palai~ELmR~L~de~gl~wd~A~~i~~~~ 372 (463)
.++.||..-+. +++++.-||+ ..|+++++|++.+++.
T Consensus 118 ~~VLVHC~~G~sRS~tvv~ayLm~----~~~~s~~~A~~~v~~~ 157 (182)
T 2j16_A 118 EKILIHAQCGLSRSATLIIAYIMK----YHNLSLRHSYDLLKSR 157 (182)
T ss_dssp CCEEEEESSCCSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEECCCCCChHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 57899999986 5677767764 4799999999999873
Done!