Your job contains 1 sequence.
>012448
MDEELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDT
LVVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQ
LLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQ
CSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELA
EIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTV
ISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGH
GKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA
AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012448
(463 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1P7L2 - symbol:PSMD5 "Uncharacterized protein"... 181 7.9e-11 1
UNIPROTKB|Q16401 - symbol:PSMD5 "26S proteasome non-ATPas... 174 4.8e-10 1
UNIPROTKB|Q5IFJ8 - symbol:PSMD5 "26S proteasome non-ATPas... 172 7.9e-10 1
UNIPROTKB|F1N6Z0 - symbol:PSMD5 "26S proteasome non-ATPas... 165 4.7e-09 1
RGD|1308434 - symbol:Psmd5 "proteasome (prosome, macropai... 163 7.9e-09 1
MGI|MGI:1914248 - symbol:Psmd5 "proteasome (prosome, macr... 162 1.0e-08 1
UNIPROTKB|F1NKW9 - symbol:PSMD5 "Uncharacterized protein"... 148 3.6e-07 1
ZFIN|ZDB-GENE-050417-28 - symbol:psmd5 "proteasome (proso... 148 3.6e-07 1
UNIPROTKB|Q0P5A6 - symbol:PSMD5 "26S proteasome non-ATPas... 143 1.3e-06 1
UNIPROTKB|J9P2T7 - symbol:J9P2T7 "Uncharacterized protein... 98 0.00078 2
>UNIPROTKB|F1P7L2 [details] [associations]
symbol:PSMD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0044183 "protein binding involved in protein
folding" evidence=IEA] InterPro:IPR016024 InterPro:IPR019538
Pfam:PF10508 GO:GO:0006457 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 OMA:RGLTHPD GeneTree:ENSGT00390000013040
EMBL:AAEX03008168 Ensembl:ENSCAFT00000005740 Uniprot:F1P7L2
Length = 502
Score = 181 (68.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 91/416 (21%), Positives = 172/416 (41%)
Query: 58 EDTLVVC-LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEAS 116
+ TL V LER+ + + + +Q GLT SVK L V ++E+SD
Sbjct: 58 QTTLCVSILERLLQAMEPVHIARNLGADLQKGLTHPDDSVKILTLSQVGRIVENSD---- 113
Query: 117 CALQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGN 176
++L + E+ ++ C+ N VA A++ ++ K++ G++ +F ++ DL
Sbjct: 114 AVTEILNNGELLKQIVYCIGGDNLSVAKAAIKSLSKISLTQAGLEALF--ESNLLDDLKR 171
Query: 177 LVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSILEL 235
V + + + R RV LIV++ SVS + + L+T LL E + D L + +E+
Sbjct: 172 -VMKTNDIVRYRVYELIVEISSVSPESLTYCTTSGLVTQLLRELTGE--DVLVRATCIEM 228
Query: 236 LYELAEIQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFI 292
+ LA H ++L++ ++ + ++I + ++ + + G L D
Sbjct: 229 VTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAIMDSPQQIC 288
Query: 293 DESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVID 352
+ ++ +SQD A++ +G +GS+I+G R ++
Sbjct: 289 ERYPV-----FVEKVFEMTESQDPTMIGVAVDTVGILGSNIEGKQVLQKTGTRFERLLMK 343
Query: 353 AAFDRQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT-- 408
+ + +L K R D I I E+ L+ S S L+
Sbjct: 344 IGYQAKNASTEL-----------KIRCLDAISSIFYIPPEQQTEDLLRMTESWFSALSRD 392
Query: 409 PSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
P LF + Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 393 PLELFRGISNQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVMDRSVEHDK 448
>UNIPROTKB|Q16401 [details] [associations]
symbol:PSMD5 "26S proteasome non-ATPase regulatory subunit
5" species:9606 "Homo sapiens" [GO:0044183 "protein binding
involved in protein folding" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0070682
"proteasome regulatory particle assembly" evidence=TAS] [GO:0022624
"proteasome accessory complex" evidence=ISS] [GO:0000502
"proteasome complex" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR016024 InterPro:IPR019538 Pfam:PF10508 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0006457 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:CH471090 GO:GO:0051436 GO:GO:0000502
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 EMBL:AL161911
GO:GO:0070682 GO:GO:0022624 CTD:5711 eggNOG:NOG245712
HOGENOM:HOG000231963 HOVERGEN:HBG053741 KO:K06692 EMBL:S79862
EMBL:D31889 EMBL:AK303007 EMBL:BC014478 IPI:IPI00002134
RefSeq:NP_001257356.1 RefSeq:NP_005038.1 UniGene:Hs.193725
ProteinModelPortal:Q16401 SMR:Q16401 IntAct:Q16401 STRING:Q16401
PhosphoSite:Q16401 DMDM:3122657 PaxDb:Q16401 PRIDE:Q16401
DNASU:5711 Ensembl:ENST00000210313 Ensembl:ENST00000373904
GeneID:5711 KEGG:hsa:5711 UCSC:uc004bko.3 GeneCards:GC09M123577
HGNC:HGNC:9563 HPA:HPA003216 MIM:604452 neXtProt:NX_Q16401
PharmGKB:PA33909 InParanoid:Q16401 OMA:RGLTHPD PhylomeDB:Q16401
GenomeRNAi:5711 NextBio:22190 ArrayExpress:Q16401 Bgee:Q16401
CleanEx:HS_PSMD5 Genevestigator:Q16401 GermOnline:ENSG00000095261
Uniprot:Q16401
Length = 504
Score = 174 (66.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 90/414 (21%), Positives = 176/414 (42%)
Query: 60 TLVVC-LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCA 118
TL V LER+ + + + +Q GL SVK L + ++E+SD
Sbjct: 62 TLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSD----AV 117
Query: 119 LQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLV 178
++L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL + V
Sbjct: 118 TEILNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKS-V 174
Query: 179 AQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSILELLY 237
+ + + R RV LI+++ SVS + + L+T LL E + D L + +E++
Sbjct: 175 MKTNDIVRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGE--DVLVRATCIEMVT 232
Query: 238 ELAEIQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFIDE 294
LA H ++L++ ++ + ++I + ++ + + G L D +
Sbjct: 233 SLAYTHHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICER 292
Query: 295 SSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVIDAA 354
++ ++SQD A++ +G +GS+++G R ++
Sbjct: 293 YPI-----FVEKVFEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGTRFERLLM--- 344
Query: 355 FDRQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PS 410
R GH + A + L K R D I +L E+ L+ S S L+ P
Sbjct: 345 --RIGHQSKNAPVE-L-----KIRCLDAISSLLYLPPEQQTDDLLRMTESWFSSLSRDPL 396
Query: 411 GLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
LF + Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 397 ELFRGISSQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>UNIPROTKB|Q5IFJ8 [details] [associations]
symbol:PSMD5 "26S proteasome non-ATPase regulatory subunit
5" species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR016024
InterPro:IPR019538 Pfam:PF10508 GO:GO:0006457 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0022624
HOVERGEN:HBG053741 EMBL:AY742819 ProteinModelPortal:Q5IFJ8
PRIDE:Q5IFJ8 Uniprot:Q5IFJ8
Length = 504
Score = 172 (65.6 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 90/411 (21%), Positives = 174/411 (42%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + + + +Q GL SVK L + ++E+SD ++
Sbjct: 65 VSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL + V +
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKT 177
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSILELLYELA 240
+ + R RV LIV++ SVS + + L+T LL E + D L + +E++ LA
Sbjct: 178 NDIVRYRVYELIVEISSVSPESLNYCTTSGLVTQLLRELTGE--DVLVRATCIEMVTSLA 235
Query: 241 EIQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFIDESSA 297
H ++L++ ++ + ++I + ++ + + G L D +
Sbjct: 236 YTHHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI 295
Query: 298 KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVIDAAFDR 357
++ +SQD A++ +G +GS+++G R ++ R
Sbjct: 296 -----FVEKVFEMTESQDPTMTGVAVDTVGILGSNVEGKQVLQKTGTRFERLLM-----R 345
Query: 358 QGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGLF 413
GH + A + L K R D I +L E+ L+ S S L+ P LF
Sbjct: 346 IGHQSKNAPVE-L-----KIRCLDAISSLLYLPPEQQTDDLLRMTESWFSALSRDPLELF 399
Query: 414 LSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ Q E+ A ++ T + +PW + + + V D S EQ K
Sbjct: 400 RGISSQPFPELHCAALKVFTAIANQPWAQKLMFNIPGFVEYVVDRSVEQDK 450
>UNIPROTKB|F1N6Z0 [details] [associations]
symbol:PSMD5 "26S proteasome non-ATPase regulatory subunit
5" species:9913 "Bos taurus" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0044183 "protein
binding involved in protein folding" evidence=IEA]
InterPro:IPR016024 InterPro:IPR019538 Pfam:PF10508 GO:GO:0006457
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008540
IPI:IPI00712472 UniGene:Bt.1773 OMA:RGLTHPD
GeneTree:ENSGT00390000013040 EMBL:DAAA02024783 EMBL:DAAA02024784
Ensembl:ENSBTAT00000022548 ArrayExpress:F1N6Z0 Uniprot:F1N6Z0
Length = 504
Score = 165 (63.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 88/416 (21%), Positives = 172/416 (41%)
Query: 58 EDTLVVC-LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEAS 116
+ TL V LER+ + + + +Q GLT + SVK L V ++E+SD
Sbjct: 60 QTTLCVSILERLLQALEPVHVARNLRVDLQRGLTHPNDSVKILTLSQVGRIVENSD---- 115
Query: 117 CALQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGN 176
++L + E+ ++ C+ N VA ++ ++ +++ G++ +F ++ DL +
Sbjct: 116 AVTEILNNAELLKQIVYCIGGENLSVAKTAIKSLSRISLTQAGLEALF--ESNLLDDLKS 173
Query: 177 LVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSILEL 235
V + + + R RV LIV++ SVS + + L+T LL E + D L + +E+
Sbjct: 174 -VMKTNDIVRYRVYELIVEISSVSPESLNCCTTSGLVTQLLRELTGE--DVLVRATCIEM 230
Query: 236 LYELAEIQHSAEFLSRTTLLQLLCSLI-GNSAT--ETILRSRAIMISGRLLSKDDSHMFI 292
+ LA H ++L++ ++ + ++I G A + + G L D
Sbjct: 231 VTSLACTHHGRQYLAQEGVIDQISNIIVGADADPFSSFYLPGFVKFFGNLAIMDSPQQIC 290
Query: 293 DESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVID 352
+ ++ +SQD A++ +G +GS+++G R ++
Sbjct: 291 ERYPI-----FMEKVFEMTESQDPTMIGVAVDTIGILGSNVEGKQVLQKTGTRFERLLMK 345
Query: 353 AAFDRQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT-- 408
+ + +L K R D + + E+ L+ S S L+
Sbjct: 346 IGYQAKNASTEL-----------KIRCLDALSSLFYLPPEQQTDDLLRMTESWFSSLSRD 394
Query: 409 PSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
P LF + Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 395 PLELFRGISNQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVMDRSVEHDK 450
>RGD|1308434 [details] [associations]
symbol:Psmd5 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 5" species:10116 "Rattus norvegicus" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0044183 "protein binding involved in protein folding"
evidence=IEA] InterPro:IPR016024 InterPro:IPR019538 Pfam:PF10508
RGD:1308434 GO:GO:0006457 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000502 EMBL:CH474001 CTD:5711 KO:K06692
OMA:RGLTHPD GeneTree:ENSGT00390000013040 RefSeq:NP_001100039.2
UniGene:Rn.13415 Ensembl:ENSRNOT00000025433 GeneID:296651
KEGG:rno:296651 NextBio:641587 Uniprot:G3V8G2
Length = 504
Score = 163 (62.4 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 85/412 (20%), Positives = 170/412 (41%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + L + +Q GLT SVK L + ++EDS+ ++
Sbjct: 65 VSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVEDSE----AVTEV 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL N V +
Sbjct: 121 LSNAELLRQVVCCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKT 177
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSILELLYELA 240
+ + R RV LI+ + SVS + + L+T LL E + D L + +E++ LA
Sbjct: 178 NDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLRELTGE--DVLVRATCIEMVTSLA 235
Query: 241 EIQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDESSA 297
H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 236 YTHHGRQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPV 295
Query: 298 KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVIDAAFDR 357
++ SQD A++ +G +GSS++G R + +
Sbjct: 296 -----FLEKVFAMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERLLTRIGYQA 350
Query: 358 QGHGKQLA-----ALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGL 412
+ +L A+ L ++ + +++D + + ES + SR S L
Sbjct: 351 KNASTELKIRCLDAVSSLLYLSPEQQTDDFLGMT----ESW----FSSVSRDSL----EL 398
Query: 413 FLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
F + Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 399 FRGISNQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEFVMDRSVEHDK 450
>MGI|MGI:1914248 [details] [associations]
symbol:Psmd5 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 5" species:10090 "Mus musculus" [GO:0006457 "protein
folding" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0044183 "protein binding involved in protein
folding" evidence=IEA] InterPro:IPR016024 InterPro:IPR019538
Pfam:PF10508 MGI:MGI:1914248 GO:GO:0006457 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:CH466542 EMBL:AL929068
GO:GO:0022624 GO:GO:0008540 CTD:5711 eggNOG:NOG245712
HOGENOM:HOG000231963 HOVERGEN:HBG053741 KO:K06692 OrthoDB:EOG4H19X9
OMA:RGLTHPD EMBL:AK032992 EMBL:AK078419 EMBL:AK145587 EMBL:AK148284
EMBL:BC019112 EMBL:AK220321 IPI:IPI00457661 RefSeq:NP_542121.2
UniGene:Mm.270632 ProteinModelPortal:Q8BJY1 SMR:Q8BJY1
IntAct:Q8BJY1 STRING:Q8BJY1 PhosphoSite:Q8BJY1 PaxDb:Q8BJY1
PRIDE:Q8BJY1 Ensembl:ENSMUST00000028225 GeneID:66998 KEGG:mmu:66998
UCSC:uc008jje.1 GeneTree:ENSGT00390000013040 InParanoid:Q5DU49
NextBio:323266 Bgee:Q8BJY1 Genevestigator:Q8BJY1
GermOnline:ENSMUSG00000026869 Uniprot:Q8BJY1
Length = 504
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 83/411 (20%), Positives = 167/411 (40%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + L + +Q GLT SVK L + ++E+S+ ++
Sbjct: 65 VSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSE----AVTEI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL N V +
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKT 177
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSILELLYELA 240
+ + R RV LI+ + SVS + + L+T LL+E + D L + +E++ LA
Sbjct: 178 NDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGE--DVLVRATCIEMVTSLA 235
Query: 241 EIQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDESSA 297
H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 236 YTHHGRQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPV 295
Query: 298 KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVIDAAFDR 357
++ SQD A++ +G +GSS++G R ++ +
Sbjct: 296 -----FLEKVFEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQA 350
Query: 358 QGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLTPSGL--F 413
+ +L K R D + +L E+ + S S ++ L F
Sbjct: 351 KNASTEL-----------KIRCLDAVSSLLYLSPEQQTDDFLGMTESWFSSMSRDSLELF 399
Query: 414 LSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 400 RGISNQPFPELHCAALKVFTAIADQPWAQRLMFNSPGFVEFVMDRSVEHDK 450
>UNIPROTKB|F1NKW9 [details] [associations]
symbol:PSMD5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0044183 "protein binding involved in protein folding"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR016024 InterPro:IPR019538
Pfam:PF10508 GO:GO:0006457 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008540 OMA:RGLTHPD
GeneTree:ENSGT00390000013040 EMBL:AADN02026384 IPI:IPI00582424
Ensembl:ENSGALT00000002500 Uniprot:F1NKW9
Length = 504
Score = 148 (57.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 87/408 (21%), Positives = 166/408 (40%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + +I + ++ GL SVK L+ V ++E+SD ++
Sbjct: 65 VAVLERLLQALDPLYVIQNLREELRKGLFHPDDSVKILSISQVGRIVENSD----AVREI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKL---AGFPNGIDIIFPADNKAATDLGNLV 178
L E+ +++C+ G E++A A +AIK L A +G++ +F + +DL N++
Sbjct: 121 LNSPEVLRQIINCI--GGEKIAVAK-EAIKSLSRIAQTQDGLEALFVSS--LLSDLKNVM 175
Query: 179 AQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYE 238
A + + R RV LIV++ SVS + + L++ L G +D L + +E++
Sbjct: 176 AT-NDVVRYRVYELIVEISSVSADSLNYCANSGLISDLI-GELTGDDVLVRATCIEMVTS 233
Query: 239 LAEIQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDES 295
LA H ++L++ ++ + ++I + ++ I G L D +
Sbjct: 234 LAHSPHGRQYLAQQGIIDKISNIIIGAESDPFSGFYLPGFIKFFGNLAVVDSPQQICERY 293
Query: 296 SAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVIDAAF 355
++ +S D A++ LG +GSS++G AR
Sbjct: 294 PV-----FMEKVFEMAESHDPTMNGVAVDTLGILGSSVEGKQVLQK-----ARGRFQNLL 343
Query: 356 DRQGHGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLS 415
++ GH + A S + E+ LR +S SS+ +S
Sbjct: 344 NKIGHQAKNAPTELRLRCLDAVSSLLYLPPEQQTEDLLRMTESWFSSLSSQPLELFRSIS 403
Query: 416 VLQQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
Q ++ R+ T + + W + + + + D S E K
Sbjct: 404 T-QPFPDLHCGALRVFTAIANQAWAQKLMLNSPGFVEYIVDRSVEPDK 450
>ZFIN|ZDB-GENE-050417-28 [details] [associations]
symbol:psmd5 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 5" species:7955 "Danio rerio" [GO:0044183
"protein binding involved in protein folding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR016024
InterPro:IPR019538 Pfam:PF10508 ZFIN:ZDB-GENE-050417-28
GO:GO:0006457 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
CTD:5711 KO:K06692 OMA:RGLTHPD GeneTree:ENSGT00390000013040
EMBL:CT025863 IPI:IPI00996569 RefSeq:NP_001017573.2
UniGene:Dr.84168 Ensembl:ENSDART00000146061 GeneID:550235
KEGG:dre:550235 NextBio:20879498 ArrayExpress:F1QU35 Bgee:F1QU35
Uniprot:F1QU35
Length = 505
Score = 148 (57.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 70/298 (23%), Positives = 137/298 (45%)
Query: 41 LSVILNTLQTKPDVPGLEDTLVVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLA 100
L +I + L T D +E V L R+ + L +Y +Q GL SVK L
Sbjct: 47 LEIIFSLLNTN-DKEQIE-VCVEILSRVLQALEPVQLAQNYRKALQSGLNHPDDSVKVL- 103
Query: 101 CKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGI 160
T+T + + A Q+L + EI ++ C+ VA ++ A+ KL+ G+
Sbjct: 104 --TLTQIGRVAG-HAEGVTQMLNNVEILHDVIQCISVERIAVAKEAIAALSKLSNTKAGL 160
Query: 161 DIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEG 219
D +F +D L +++ S + R RV LIV++ +VS + L++ +LEE
Sbjct: 161 DALFRSD--LLNKLKDVMLT-SDIIRYRVYELIVEVSTVSPVSLGYCANSGLISQMLEEL 217
Query: 220 VSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMIS 279
+D L + +E++ LA+ QH ++L++ ++ + ++I + ++T ++ +
Sbjct: 218 TG--DDVLVRATAIEMVTNLAQSQHGRQYLAQQGIMDKISNMIIAAESDTF---SSLYLP 272
Query: 280 GRLLSKDDSHMFID--ESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQG 335
G L+ S +D + + ++ + + D AL+ LG +G +++G
Sbjct: 273 G-LVKFFGSLAIMDSPQQVCEKYPVFLEVVFSMVMNLDPTLTPVALDTLGVLGGTVEG 329
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 85/415 (20%), Positives = 172/415 (41%)
Query: 58 EDTLVVCLE---RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLE 114
++ + VC+E R+ + L +Y +Q GL SVK L T+T + +
Sbjct: 59 KEQIEVCVEILSRVLQALEPVQLAQNYRKALQSGLNHPDDSVKVL---TLTQIGRVAG-H 114
Query: 115 ASCALQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDL 174
A Q+L + EI ++ C+ VA ++ A+ KL+ G+D +F +D L
Sbjct: 115 AEGVTQMLNNVEILHDVIQCISVERIAVAKEAIAALSKLSNTKAGLDALFRSD--LLNKL 172
Query: 175 GNLVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSIL 233
+++ S + R RV LIV++ +VS + L++ +LEE +D L + +
Sbjct: 173 KDVMLT-SDIIRYRVYELIVEVSTVSPVSLGYCANSGLISQMLEELTG--DDVLVRATAI 229
Query: 234 ELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFID 293
E++ LA+ QH ++L++ ++ + ++I + ++T ++ + G L+ S +D
Sbjct: 230 EMVTNLAQSQHGRQYLAQQGIMDKISNMIIAAESDTF---SSLYLPG-LVKFFGSLAIMD 285
Query: 294 --ESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVI 351
+ + ++ + + D AL+ LG +G +++G + V
Sbjct: 286 SPQQVCEKYPVFLEVVFSMVMNLDPTLTPVALDTLGVLGGTVEGKQVLQKT---GEKFV- 341
Query: 352 DAAFDRQGHGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLT--P 409
+ R A G + + +L E+ L+ S + L+ P
Sbjct: 342 -SVLKRMSK----VASDGATELRVRCLEALAQLLTLPVEQQTDDLLLTCESWFNCLSSQP 396
Query: 410 SGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ ++ Q E+ + R+ T + +PW + + V D S K
Sbjct: 397 MAMIRNISTQPFPELHCSALRIFTAIGCQPWAQQLMMDTPGFVEWVMDRSVGSGK 451
>UNIPROTKB|Q0P5A6 [details] [associations]
symbol:PSMD5 "26S proteasome non-ATPase regulatory subunit
5" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IEA] [GO:0044183 "protein binding
involved in protein folding" evidence=IEA] InterPro:IPR016024
InterPro:IPR019538 Pfam:PF10508 GO:GO:0006457 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0022624 GO:GO:0008540
EMBL:BC120300 IPI:IPI00712472 RefSeq:NP_001069161.1 UniGene:Bt.1773
STRING:Q0P5A6 PRIDE:Q0P5A6 GeneID:515021 KEGG:bta:515021 CTD:5711
eggNOG:NOG245712 HOGENOM:HOG000231963 HOVERGEN:HBG053741
InParanoid:Q0P5A6 KO:K06692 OrthoDB:EOG4H19X9 NextBio:20871627
ArrayExpress:Q0P5A6 Uniprot:Q0P5A6
Length = 503
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 64/283 (22%), Positives = 129/283 (45%)
Query: 58 EDTLVVC-LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEAS 116
+ TL V LER+ + + + +Q GLT + SVK L V ++E+SD
Sbjct: 60 QTTLCVSILERLLQALEPVHVARNLRVDLQRGLTHPNDSVKILTLSQVGRIVENSD---- 115
Query: 117 CALQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGN 176
++L + E+ ++ C+ N VA ++ ++ +++ G++ +F ++ DL +
Sbjct: 116 AVTEILNNAELLKQIVYCIGGENLSVAKTAIKSLSRISLTQAGLEALF--ESNLLDDLKS 173
Query: 177 LVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSILEL 235
V + + + R RV LIV++ SVS + + L+T LL E + D L + +E+
Sbjct: 174 -VMKTNDIVRYRVYELIVEISSVSPESLNCCTTSGLVTQLLRELTGE--DVLVRATCIEM 230
Query: 236 LYELAEIQHSAEFLSRTTLLQLLCSLI-GNSAT--ETILRSRAIMISGRLLSKDDSHMFI 292
+ LA H ++L++ ++ + ++I G A + + G L D
Sbjct: 231 VTSLACTHHGRQYLAQEGVIDQISNIIVGADADPFSSFYLPGFVKFFGNLAIMDSPQQIC 290
Query: 293 DESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQG 335
+ ++ +SQD A++ +G +GS+++G
Sbjct: 291 ERYPI-----FMEKVFEMTESQDPTMIGVAVDTIGILGSNVEG 328
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 71/359 (19%), Positives = 149/359 (41%)
Query: 113 LEASCAL-QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAA 171
+E S A+ ++L + E+ ++ C+ N VA ++ ++ +++ G++ +F ++
Sbjct: 111 VENSDAVTEILNNAELLKQIVYCIGGENLSVAKTAIKSLSRISLTQAGLEALF--ESNLL 168
Query: 172 TDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETL 230
DL + V + + + R RV LIV++ SVS + + L+T LL E + D L
Sbjct: 169 DDLKS-VMKTNDIVRYRVYELIVEISSVSPESLNCCTTSGLVTQLLRELTGE--DVLVRA 225
Query: 231 SILELLYELAEIQHSAEFLSRTTLLQLLCSLI-GNSAT--ETILRSRAIMISGRLLSKDD 287
+ +E++ LA H ++L++ ++ + ++I G A + + G L D
Sbjct: 226 TCIEMVTSLACTHHGRQYLAQEGVIDQISNIIVGADADPFSSFYLPGFVKFFGNLAIMDS 285
Query: 288 SHMFIDESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAA 347
+ ++ +SQD A++ +G +GS+++G
Sbjct: 286 PQQICERYPI-----FMEKVFEMTESQDPTMIGVAVDTIGILGSNVEGKQVLQKTGTRFE 340
Query: 348 RHVIDAAFDRQGHGKQLA--ALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSS 405
R ++ + + +L L L+++ L + + L + S S
Sbjct: 341 RLLMKIGYQAKNASTELKIRCLDALSSL---------FYLPPEQTDDLLRMTESWFSSLS 391
Query: 406 KLTPSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ P LF + Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 392 R-DPLELFRGISNQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVMDRSVEHDK 449
>UNIPROTKB|J9P2T7 [details] [associations]
symbol:J9P2T7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0044183 "protein binding involved in protein
folding" evidence=IEA] InterPro:IPR016024 InterPro:IPR019538
Pfam:PF10508 GO:GO:0006457 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GeneTree:ENSGT00390000013040 EMBL:AAEX03007832
OMA:PEQETED Ensembl:ENSCAFT00000002210 Uniprot:J9P2T7
Length = 461
Score = 98 (39.6 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 56/282 (19%), Positives = 109/282 (38%)
Query: 191 SLIVKLFSVSRSVASVIFKANLLT-LLEEGVSKKNDTLETLSILELLYELAEIQHSAEFL 249
+LIV++ SVS + + L+T LL E + D L + +E++ LA H ++L
Sbjct: 144 ALIVEISSVSPESLTYCTPSGLVTQLLRELTGE--DVLVRATCIEMVTSLAYTHHGRQYL 201
Query: 250 SRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDG 306
++ ++ + ++I + ++ + + G L D + ++
Sbjct: 202 AQEGVIDQISNIIVGADSDPFSSFYLPGLVKFFGNLAIMDSPQQICERYPV-----FVEK 256
Query: 307 RLGFLQSQDSDECESALEALGQIGSSIQGATXXXXXXPPAARHVIDAAFDRQGHGKQLAA 366
+SQD A++ +G +GS+++G R ++ + + +L
Sbjct: 257 VFEMTESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGTRFERLLMKIGYQAKNASTEL-- 314
Query: 367 LHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-A 421
K R D I I E+ L+ S S L+ P LF + Q
Sbjct: 315 ---------KIRCLDAISSIFYIPPEQQTEDLLRMTESWFSALSRDPLELFRGISNQPFP 365
Query: 422 EIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
E+ A ++ T + +PW + + + V D S E K
Sbjct: 366 ELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVMDRSVEHDK 407
Score = 63 (27.2 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 58 EDTLVVC-LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEAS 116
+ TL V LER+ + + + +Q GLT SVK L V ++E+SD
Sbjct: 60 QTTLCVSILERLLQAMEPVHIARNLGADLQKGLTHPDDSVKILTLSQVGRIVENSD---- 115
Query: 117 CALQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPA 166
++L + E+ ++ C+ N VA A + I ++ P + P+
Sbjct: 116 AVTEILNNGELLKQIVYCIGGDNLSVAKALIVEISSVS--PESLTYCTPS 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 463 457 0.00094 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 606 (64 KB)
Total size of DFA: 222 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.86u 0.10s 34.96t Elapsed: 00:00:01
Total cpu time: 34.86u 0.10s 34.96t Elapsed: 00:00:01
Start: Fri May 10 14:05:01 2013 End: Fri May 10 14:05:02 2013