BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012448
(463 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302142965|emb|CBI20260.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/461 (71%), Positives = 383/461 (83%)
Query: 3 EELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLV 62
EE ++DD LL +ASDF +HPGV +DA+AK FL RFPL VI+N LQTK DVPG+E TLV
Sbjct: 2 EEYTLDDPTLLLQAASDFGHHPGVHSDASAKAFLHRFPLPVIINVLQTKADVPGVESTLV 61
Query: 63 VCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLL 122
CLERIF TK+GASLIP YMPFVQVGL ADS V+ LACKTV+CLLE+ A QL+
Sbjct: 62 ACLERIFCTKHGASLIPQYMPFVQVGLRADSQVVRCLACKTVSCLLENFGENTVPAAQLI 121
Query: 123 IDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCS 182
++++IYPLLLDCLINGNE+VATASMDAIK LAG G++IIFPA++ AT L NL A+CS
Sbjct: 122 VEHDIYPLLLDCLINGNEQVATASMDAIKSLAGSFEGMEIIFPANDNEATHLRNLAARCS 181
Query: 183 SLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEI 242
SLGRVRVL+L+VKLFSVS SVAS+I ++LL LLE V +DTL TLS+LELLYELAEI
Sbjct: 182 SLGRVRVLALVVKLFSVSSSVASLIHNSDLLNLLEAEVCNTDDTLVTLSVLELLYELAEI 241
Query: 243 QHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVIS 302
QH EFL RTTL+QLL S+IGN++ E+ILRSRA+MISGRLLSK++ FIDES KTVIS
Sbjct: 242 QHGTEFLPRTTLVQLLSSIIGNTSMESILRSRAMMISGRLLSKENIFKFIDESCVKTVIS 301
Query: 303 AIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGK 362
IDGRL L+SQD+DECESALE LGQIGSSI GA LLLL PPAARHVIDAAFDRQG G+
Sbjct: 302 LIDGRLRSLESQDADECESALETLGQIGSSIHGAELLLLSSPPAARHVIDAAFDRQGRGR 361
Query: 363 QLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAE 422
LAALH L NI+G+TRSE+KI+LN DAEESL+HLIYE AS+S KLTPSGLFLSVLQQ AE
Sbjct: 362 HLAALHALGNISGETRSENKIMLNNDAEESLQHLIYESASKSPKLTPSGLFLSVLQQDAE 421
Query: 423 IRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+RLAGYR+ITGLVARPWCLME+CSKQEI+N +T A +E K
Sbjct: 422 VRLAGYRVITGLVARPWCLMEICSKQEIVNIITGAHSETTK 462
>gi|225461530|ref|XP_002285156.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
[Vitis vinifera]
Length = 527
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/463 (71%), Positives = 383/463 (82%), Gaps = 2/463 (0%)
Query: 3 EELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLV 62
EE ++DD LL +ASDF +HPGV +DA+AK FL RFPL VI+N LQTK DVPG+E TLV
Sbjct: 2 EEYTLDDPTLLLQAASDFGHHPGVHSDASAKAFLHRFPLPVIINVLQTKADVPGVESTLV 61
Query: 63 VCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLL 122
CLERIF TK+GASLIP YMPFVQVGL ADS V+ LACKTV+CLLE+ A QL+
Sbjct: 62 ACLERIFCTKHGASLIPQYMPFVQVGLRADSQVVRCLACKTVSCLLENFGENTVPAAQLI 121
Query: 123 IDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCS 182
++++IYPLLLDCLINGNE+VATASMDAIK LAG G++IIFPA++ AT L NL A+CS
Sbjct: 122 VEHDIYPLLLDCLINGNEQVATASMDAIKSLAGSFEGMEIIFPANDNEATHLRNLAARCS 181
Query: 183 SLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEI 242
SLGRVRVL+L+VKLFSVS SVAS+I ++LL LLE V +DTL TLS+LELLYELAEI
Sbjct: 182 SLGRVRVLALVVKLFSVSSSVASLIHNSDLLNLLEAEVCNTDDTLVTLSVLELLYELAEI 241
Query: 243 QHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDES--SAKTV 300
QH EFL RTTL+QLL S+IGN++ E+ILRSRA+MISGRLLSK++ FIDES KTV
Sbjct: 242 QHGTEFLPRTTLVQLLSSIIGNTSMESILRSRAMMISGRLLSKENIFKFIDESLLGVKTV 301
Query: 301 ISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGH 360
IS IDGRL L+SQD+DECESALE LGQIGSSI GA LLLL PPAARHVIDAAFDRQG
Sbjct: 302 ISLIDGRLRSLESQDADECESALETLGQIGSSIHGAELLLLSSPPAARHVIDAAFDRQGR 361
Query: 361 GKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA 420
G+ LAALH L NI+G+TRSE+KI+LN DAEESL+HLIYE AS+S KLTPSGLFLSVLQQ
Sbjct: 362 GRHLAALHALGNISGETRSENKIMLNNDAEESLQHLIYESASKSPKLTPSGLFLSVLQQD 421
Query: 421 AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
AE+RLAGYR+ITGLVARPWCLME+CSKQEI+N +T A +E K
Sbjct: 422 AEVRLAGYRVITGLVARPWCLMEICSKQEIVNIITGAHSETTK 464
>gi|118485840|gb|ABK94767.1| unknown [Populus trichocarpa]
Length = 528
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/466 (71%), Positives = 386/466 (82%), Gaps = 5/466 (1%)
Query: 1 MD-EELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLED 59
MD EE SM+D +QLL SAS+FA +PGV ND AAK+FLDRFPL VI+N LQTK +VPGLE
Sbjct: 1 MDGEEFSMEDPSQLLQSASEFANYPGVPNDVAAKEFLDRFPLPVIINALQTKSEVPGLEA 60
Query: 60 TLVVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCAL 119
TLV CLERIFKTK GASLIPHYMPFVQVGLTADS V+ LACKTV+CLL++ D E A
Sbjct: 61 TLVACLERIFKTKCGASLIPHYMPFVQVGLTADSQLVRCLACKTVSCLLKNID-ETISAA 119
Query: 120 QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA 179
QL+ID +YPLLLDCLINGNE+VATASM+AI+KLAG G++I+FPA+N LGNL A
Sbjct: 120 QLIIDNGVYPLLLDCLINGNEQVATASMEAIEKLAGSQKGMEIVFPANNSDDMHLGNLSA 179
Query: 180 QCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYEL 239
+CSSLGRVRVLSLIVKLFSVSR VAS ++ +NLL+LLE + +DTL +LS+ EL YEL
Sbjct: 180 RCSSLGRVRVLSLIVKLFSVSRDVASAVYNSNLLSLLEAKIRDTDDTLVSLSVFELFYEL 239
Query: 240 AEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESS--A 297
AE++H+ EFLS+TTL+QLL S I N + E ILRSRA+MISGRLLS D+ +MFIDES+
Sbjct: 240 AEVKHATEFLSKTTLVQLLSSTISNMSKEAILRSRAMMISGRLLSNDNIYMFIDESNLGV 299
Query: 298 KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDR 357
K +ISAIDGRL L+SQD +ECESALEALGQIGSS QGATLLL PPAARHVIDAAFD+
Sbjct: 300 KAIISAIDGRLR-LESQDLNECESALEALGQIGSSNQGATLLLTISPPAARHVIDAAFDK 358
Query: 358 QGHGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVL 417
GKQLA+LH LANI+G+TRS+ IILN DAEESLR LIYE AS+SSKLTPSGLFLSVL
Sbjct: 359 HARGKQLASLHSLANISGETRSDSNIILNGDAEESLRLLIYEAASKSSKLTPSGLFLSVL 418
Query: 418 QQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
QQ +++RLA YR++TGLVARPWCLME+CSKQEIIN VT +TE K
Sbjct: 419 QQDSQVRLAAYRVLTGLVARPWCLMEICSKQEIINIVTGPNTETTK 464
>gi|356517098|ref|XP_003527227.1| PREDICTED: uncharacterized protein LOC100785671 [Glycine max]
Length = 525
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 314/462 (67%), Positives = 377/462 (81%), Gaps = 5/462 (1%)
Query: 7 MDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLE 66
MDDS+QLL +ASDF ++PG +D +++ FL+RFPL VI+N LQT+ DVPGLE+TLV CLE
Sbjct: 1 MDDSSQLLQAASDFVHYPGPHSDDSSRDFLNRFPLPVIINALQTQLDVPGLENTLVACLE 60
Query: 67 RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLE--DSDLEASCALQLLID 124
R+F TK GASLIP YMPFVQVGL ADS +V+ LACKTVT LLE D+D + + + L+ D
Sbjct: 61 RLFNTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTSLLENLDNDHKVAASACLIKD 120
Query: 125 YEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSL 184
+ IYPLLLDCLINGNE+VA + DAIKKLAGFP G++IIFP+D TDL + +QCSSL
Sbjct: 121 FNIYPLLLDCLINGNEQVAAVATDAIKKLAGFPEGMEIIFPSDKGDDTDLEIIASQCSSL 180
Query: 185 GRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQH 244
GRVRVL+L+VKLFSVSRS AS I+ NLL LLE + +DTL TLS+LEL+YELAEI+H
Sbjct: 181 GRVRVLALVVKLFSVSRSAASTIYSLNLLQLLEAEIRNADDTLVTLSVLELIYELAEIEH 240
Query: 245 SAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAI 304
EFLS+T++ QLL S+I +++ E+ILRSRA+MISGRLLSKD + F DE K VIS+I
Sbjct: 241 GTEFLSKTSIFQLLSSMISHNSMESILRSRAMMISGRLLSKDIIYSFTDEPCVKAVISSI 300
Query: 305 DGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQ---GHG 361
DGRL L++ D DECE+ALE+LG +GSSIQGATLLL PAARHVI+AAF+RQ GHG
Sbjct: 301 DGRLQSLEASDRDECETALESLGHMGSSIQGATLLLSGSSPAARHVINAAFERQGPTGHG 360
Query: 362 KQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAA 421
KQLAALH L NI+G+TRSE+ IILNA+ EE+LR LIYE ASRSSKLTPSGLFLSVLQQ +
Sbjct: 361 KQLAALHALGNISGETRSENNIILNAEEEENLRRLIYETASRSSKLTPSGLFLSVLQQDS 420
Query: 422 EIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
EIRLAGYRM++GLVARPWCLME+CSKQEIIN VTD STE K
Sbjct: 421 EIRLAGYRMLSGLVARPWCLMEICSKQEIINKVTDPSTETTK 462
>gi|255582937|ref|XP_002532239.1| 26S proteasome non-ATPase regulatory subunit, putative [Ricinus
communis]
gi|223528057|gb|EEF30133.1| 26S proteasome non-ATPase regulatory subunit, putative [Ricinus
communis]
Length = 612
Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust.
Identities = 313/463 (67%), Positives = 368/463 (79%), Gaps = 1/463 (0%)
Query: 1 MDEELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDT 60
MDEE SM+D LL SASDFAY+PG QNDA K FLD FPL VI + LQTK DVP LE T
Sbjct: 88 MDEEFSMEDPTPLLQSASDFAYYPGAQNDAVVKDFLDHFPLPVIFSALQTKADVPDLERT 147
Query: 61 LVVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQ 120
LV CLE+IFKTKYGASLIP YM FV +GL ADS VK LACKTV+CLLE+ + + Q
Sbjct: 148 LVACLEKIFKTKYGASLIPQYMAFVNLGLKADSQLVKCLACKTVSCLLENVNDKTISPAQ 207
Query: 121 LLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQ 180
L+ID IYPLLL C++ GN EVA ASM+AI+K AGFP I++IFPA+N+ T L NL A+
Sbjct: 208 LVIDNGIYPLLLHCVLIGNGEVAIASMEAIQKFAGFPKAIEVIFPANNEDFTHLRNLSAR 267
Query: 181 CSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELA 240
CSSLGRVR+LSL+VKLF+VS VA+V+F +NLL+LLE VS +DTL TLSILEL YELA
Sbjct: 268 CSSLGRVRLLSLVVKLFTVSPDVAAVVFNSNLLSLLEAEVSNTDDTLVTLSILELFYELA 327
Query: 241 EIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTV 300
E+QH EFLS T L++LL S+I N + + ILRSRA+MISGRLLSK++ + F++ES KTV
Sbjct: 328 EVQHGIEFLSSTNLIRLLPSIISNISADAILRSRAMMISGRLLSKENIYAFVNESGVKTV 387
Query: 301 ISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGH 360
ISAIDGRLG ++SQD +ECE ALEA GQIGSS GATLLL PPAARHVIDAAFDRQ
Sbjct: 388 ISAIDGRLG-VESQDLNECECALEAFGQIGSSTPGATLLLTMSPPAARHVIDAAFDRQAR 446
Query: 361 GKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA 420
GKQLAALH L I+G++RSE IILN +AEE+LR LIY+ AS++ KLTPSGLFLS+LQQ
Sbjct: 447 GKQLAALHSLGYISGESRSESNIILNGEAEETLRRLIYDTASKTPKLTPSGLFLSILQQD 506
Query: 421 AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
AE RLA YRMITGLV RPWCLME+C+KQEI+N VTD +TE K
Sbjct: 507 AEARLAAYRMITGLVFRPWCLMEICTKQEIVNIVTDPTTETIK 549
>gi|357516527|ref|XP_003628552.1| 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]
gi|355522574|gb|AET03028.1| 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]
Length = 526
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 303/466 (65%), Positives = 370/466 (79%), Gaps = 7/466 (1%)
Query: 1 MDEELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDT 60
MDE+ S QLL +A+DFA +PG +D +A FL+RFPL +I+N LQT+ DVPGLE T
Sbjct: 1 MDEQ----SSQQLLQAATDFANYPGSHSDDSATDFLNRFPLPLIINALQTQFDVPGLETT 56
Query: 61 LVVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQ 120
LVVCLER+FKTK+GASLIP YM FVQVGL +DS +V+ LACKTVT LLE+ D + A
Sbjct: 57 LVVCLERLFKTKFGASLIPQYMQFVQVGLQSDSQAVRSLACKTVTSLLENLDNSYTVAAH 116
Query: 121 LLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQ 180
L+ ++ IYPLLLDCLINGNEEVA ++DAIKKLA F G+DIIFP+ TDLG + +Q
Sbjct: 117 LIKEFNIYPLLLDCLINGNEEVAAGAIDAIKKLASFSEGLDIIFPSTKGGDTDLGIIASQ 176
Query: 181 CSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELA 240
CSSLGRVRVL+L+VKLFSVS S AS I NLL LLE + +DTL TLS+ ELLYELA
Sbjct: 177 CSSLGRVRVLALVVKLFSVSTSAASAICSLNLLKLLEAEIRSTDDTLVTLSVFELLYELA 236
Query: 241 EIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTV 300
E++H EFLS+T+L QLL S+I + + ++ILRSRA+MISGRLLSK++++ FIDE AK+V
Sbjct: 237 EVEHGTEFLSKTSLFQLLSSIISDDSKDSILRSRAMMISGRLLSKENTYSFIDEPCAKSV 296
Query: 301 ISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQG- 359
IS+IDGRL L + DE E+ALE+LGQIG +I+GA LLL PAARH IDAAFDRQG
Sbjct: 297 ISSIDGRLQSLDPSNKDEFETALESLGQIGLTIRGAKLLLSGTSPAARHAIDAAFDRQGP 356
Query: 360 --HGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVL 417
HG+QLAALH L NI+G+TRSE+ +IL+A+AEE+L L+YE ASRSSKLTPSGLFLSVL
Sbjct: 357 ERHGRQLAALHALGNISGETRSENDVILDAEAEENLLRLLYETASRSSKLTPSGLFLSVL 416
Query: 418 QQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
QQ +EIR+AGYRMI+GLV+RPWCLME+CS+QEIIN VTD STE K
Sbjct: 417 QQDSEIRIAGYRMISGLVSRPWCLMEICSRQEIINIVTDPSTETTK 462
>gi|449456623|ref|XP_004146048.1| PREDICTED: uncharacterized protein LOC101213054 [Cucumis sativus]
gi|449507084|ref|XP_004162929.1| PREDICTED: uncharacterized protein LOC101228134 [Cucumis sativus]
Length = 525
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 296/461 (64%), Positives = 369/461 (80%)
Query: 3 EELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLV 62
EE S++D +LL +A++FA +PGV+ DA+ K+FLDRFPL I+N LQTK + PGLEDTLV
Sbjct: 2 EEFSVNDPTRLLQAAANFANYPGVRTDASVKEFLDRFPLPAIINALQTKAEFPGLEDTLV 61
Query: 63 VCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLL 122
CL+RIFKTKYGASLIPHYMPFVQVGL ADS +V+ LACKTVT LL++SD A +QL+
Sbjct: 62 ACLDRIFKTKYGASLIPHYMPFVQVGLQADSQTVRTLACKTVTRLLQESDETALSPIQLI 121
Query: 123 IDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCS 182
IDY IYPLLLDCL+NGNE+VA +SMD+IK LA FP G++II P++ AT LG + + CS
Sbjct: 122 IDYGIYPLLLDCLLNGNEQVANSSMDSIKTLAAFPQGMEIIIPSNKTEATHLGTVASTCS 181
Query: 183 SLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEI 242
SLGRVRV++L+VKLFSVS SVAS ++ ANLL+LLE ++ DTL TLS+LELLYEL EI
Sbjct: 182 SLGRVRVMALVVKLFSVSSSVASAVYNANLLSLLESEINNSKDTLVTLSVLELLYELVEI 241
Query: 243 QHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVIS 302
+H +FL RT+ LQLL S+I NS+ E+ILRSRA++I GRLLSK++ +DES + +IS
Sbjct: 242 EHGTKFLPRTSFLQLLGSIISNSSAESILRSRAMVICGRLLSKENIFSLVDESCLRNLIS 301
Query: 303 AIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGK 362
A+DG LG + +D + E+A+EALGQIGSS GATLLL P +HVI AAFDR HGK
Sbjct: 302 AVDGILGSSEGEDVNVSEAAIEALGQIGSSTWGATLLLSSFPTCVKHVIYAAFDRHEHGK 361
Query: 363 QLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAE 422
QLAA+H L NI G+ RSE+ I+LN +AEE+LR LIY++ASRSSK+TPSGLFL+VLQQ +E
Sbjct: 362 QLAAMHALGNIFGEGRSENDIMLNDNAEENLRDLIYQIASRSSKMTPSGLFLAVLQQDSE 421
Query: 423 IRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
IRLA YRMITGLVARPWCL E+CSKQ+I+N V DAS+E K
Sbjct: 422 IRLASYRMITGLVARPWCLTEICSKQDIVNIVGDASSETTK 462
>gi|224128067|ref|XP_002329073.1| predicted protein [Populus trichocarpa]
gi|222869742|gb|EEF06873.1| predicted protein [Populus trichocarpa]
Length = 573
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 321/512 (62%), Positives = 373/512 (72%), Gaps = 52/512 (10%)
Query: 1 MD-EELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLED 59
MD EE SM+D +QLL SAS+FA +PGV ND AAK+FLDRFPL VI+N LQTK +VPGLE
Sbjct: 1 MDGEEFSMEDPSQLLQSASEFANYPGVPNDVAAKEFLDRFPLPVIINALQTKSEVPGLEA 60
Query: 60 TLVVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCAL 119
TLV CLERIFKTK GASLIPHYMPFVQVGLTADS V+ LACKTV+CLL++ D E A
Sbjct: 61 TLVACLERIFKTKCGASLIPHYMPFVQVGLTADSQLVRCLACKTVSCLLKNID-ETISAA 119
Query: 120 QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA 179
QL+ID +YPLLLDCLINGNE+VATASM+AI+KLAG G++I+FPA+N LGNL A
Sbjct: 120 QLIIDNGVYPLLLDCLINGNEQVATASMEAIEKLAGSQKGMEIVFPANNSDDMHLGNLSA 179
Query: 180 QCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYEL 239
+CSSLGRVRVLSLIVKLFSVSR VAS ++ +NLL+LLE + +DTL +LS+ EL YE+
Sbjct: 180 RCSSLGRVRVLSLIVKLFSVSRDVASAVYNSNLLSLLEAKIRDTDDTLVSLSVFELFYEV 239
Query: 240 AEIQHSAEFLSRTTLLQLL-------------CSLIGNSATETILRSRAIMISGRLLSKD 286
I + L L C L+ N + E ILRSRA+MISGRLLS D
Sbjct: 240 GAILLNDIVCLNNILPSGLISFFIFYFLFSFICYLV-NMSKEAILRSRAMMISGRLLSND 298
Query: 287 DSHMFIDESS-----------------------------------AKTVISAIDGRLGFL 311
+ +MFIDESS K +ISAIDGRL L
Sbjct: 299 NIYMFIDESSKTYPEVLELIDFHKDIYLKKLHFICKCTVFLSDLGVKAIISAIDGRLR-L 357
Query: 312 QSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLA 371
+SQD +ECESALEALGQIGSS QGATLLL PPAARHVIDAAFD+ GKQLA+LH LA
Sbjct: 358 ESQDLNECESALEALGQIGSSNQGATLLLTISPPAARHVIDAAFDKHARGKQLASLHSLA 417
Query: 372 NIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMI 431
NI+G+TRS+ IILN DAEESLR LIYE AS+SSKLTPSGLFLSVLQQ +++RLA YR++
Sbjct: 418 NISGETRSDSNIILNGDAEESLRLLIYEAASKSSKLTPSGLFLSVLQQDSQVRLAAYRVL 477
Query: 432 TGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
TGLVARPWCLME+CSKQEIIN VT +TE K
Sbjct: 478 TGLVARPWCLMEICSKQEIINIVTGPNTETTK 509
>gi|84468258|dbj|BAE71213.1| hypothetical protein [Trifolium pratense]
Length = 524
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 298/461 (64%), Positives = 373/461 (80%), Gaps = 4/461 (0%)
Query: 7 MDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLE 66
MD+ +QLL++A+DFA++PG +D +A +FL+RFPL +I+N LQT+ DVPGLE TLV CL+
Sbjct: 1 MDEQSQLLEAATDFAHYPGSHSDHSATQFLNRFPLPLIINALQTQFDVPGLESTLVQCLQ 60
Query: 67 RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYE 126
R+FKTK GASLIP YMPFVQVGL ADS +V+ LACKTVTCLL++ D + A L+ ++
Sbjct: 61 RLFKTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLLKNLDNSHTVAAHLIKEFN 120
Query: 127 IYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGR 186
IY LLLDCLINGNE+VA A+++AIKKLA FP G+DI+FP+ TDLG + +QCSSLGR
Sbjct: 121 IYSLLLDCLINGNEDVAAAAINAIKKLASFPEGMDIVFPSTKGGDTDLGIIASQCSSLGR 180
Query: 187 VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSA 246
VRVL+L+VKLFSVS S AS I+ NLL LLE + +DTL TLS+ ELLYELAE++H A
Sbjct: 181 VRVLALVVKLFSVSTSAASAIYSLNLLKLLEAEIRSADDTLVTLSVFELLYELAEVEHGA 240
Query: 247 EFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDG 306
EFLS+++L QLL S+I + ++++ILRSRA+MISGR+LSK+ ++ IDE AK VIS+IDG
Sbjct: 241 EFLSKSSLFQLLSSIISDDSSDSILRSRAMMISGRILSKEITYSSIDEPCAKIVISSIDG 300
Query: 307 RLGFLQ-SQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQG---HGK 362
RL L+ + DE E+ALE+LGQIG I+GA LLL PAARHVIDAAFDRQG HG+
Sbjct: 301 RLQSLEDPSNRDEFETALESLGQIGLFIRGAKLLLSGTSPAARHVIDAAFDRQGPERHGR 360
Query: 363 QLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAE 422
QLAALH L NI+G+TRSE IIL+A+AE++L L+YE ASRSSKLTPSGLFLSVLQQ +E
Sbjct: 361 QLAALHALGNISGETRSESDIILDAEAEDNLLRLLYETASRSSKLTPSGLFLSVLQQDSE 420
Query: 423 IRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
IR+AGYRMI+GLV+RPWCLME+CS+QEIIN VTD STE K
Sbjct: 421 IRIAGYRMISGLVSRPWCLMEICSRQEIINIVTDPSTETTK 461
>gi|18400660|ref|NP_566503.1| 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis
thaliana]
gi|30102760|gb|AAP21298.1| At3g15180 [Arabidopsis thaliana]
gi|110743085|dbj|BAE99435.1| hypothetical protein [Arabidopsis thaliana]
gi|332642107|gb|AEE75628.1| 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis
thaliana]
Length = 519
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/457 (59%), Positives = 355/457 (77%)
Query: 7 MDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLE 66
M+D NQL D+A +FA++PG QN+ + K+FLDRFPL VI N LQT PD+PG E+TLV CLE
Sbjct: 1 MEDVNQLFDAAFEFAHYPGAQNETSVKEFLDRFPLPVIFNALQTDPDIPGFENTLVTCLE 60
Query: 67 RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYE 126
R+FKTKYGASLIP YMP +QVGL ADS VK LACKTV CLLED D ++QL+++
Sbjct: 61 RLFKTKYGASLIPQYMPVLQVGLKADSAVVKSLACKTVLCLLEDCDTNDVSSVQLVVNNG 120
Query: 127 IYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGR 186
IYPLLLD +IN ++EVA A+ + IK LA FP+ + +IFP++ T L NL A+CSSL R
Sbjct: 121 IYPLLLDYIINSDDEVANAASETIKSLARFPDAMSVIFPSETNDPTHLRNLAARCSSLAR 180
Query: 187 VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSA 246
VRVLSLIVKLFS+SR VAS + K+ LL LLE + DTL L++LEL YEL E++HS+
Sbjct: 181 VRVLSLIVKLFSISRLVASEVKKSGLLDLLEAEMKGTKDTLVILNVLELYYELMEVEHSS 240
Query: 247 EFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDG 306
EF+ +T+L+QLLCS+I ++T + RA+MISGRLLSK++ + ++E+S K +ISAIDG
Sbjct: 241 EFVPQTSLIQLLCSIISGTSTGPYEKLRAMMISGRLLSKENIYKVVEEASVKALISAIDG 300
Query: 307 RLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAA 366
L ++ D+D E+A++ALGQ+GS+ +GA L+L PPAARHV+ +AFDR HGKQLAA
Sbjct: 301 SLESVEMNDTDAQEAAIDALGQMGSTTKGADLVLSTSPPAARHVVASAFDRNAHGKQLAA 360
Query: 367 LHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLA 426
LH LANIAG+TR + I++ AEESLR LIY+ A++S+KLTPSGLFLSVLQQ++EIRLA
Sbjct: 361 LHALANIAGETRPKSNRIVDGKAEESLRCLIYDAAAQSTKLTPSGLFLSVLQQSSEIRLA 420
Query: 427 GYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
GYR +T LVARPWCL+E+ +K+EIIN VTDA+TE K
Sbjct: 421 GYRTLTALVARPWCLVEILAKEEIINIVTDATTETAK 457
>gi|21593496|gb|AAM65463.1| unknown [Arabidopsis thaliana]
Length = 519
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/457 (59%), Positives = 355/457 (77%)
Query: 7 MDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLE 66
M+D NQL D+A +FA++PG QN+ + K+FLDRFPL VI N LQT PD+PG E+TLV CLE
Sbjct: 1 MEDVNQLFDAAFEFAHYPGAQNETSVKEFLDRFPLPVIFNALQTDPDIPGFENTLVTCLE 60
Query: 67 RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYE 126
R+FKTKYGASLIP YMP +QVGL ADS VK LACKTV CLLED D ++QL+++
Sbjct: 61 RLFKTKYGASLIPQYMPVLQVGLKADSAVVKSLACKTVLCLLEDCDTNDVSSVQLVVNNG 120
Query: 127 IYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGR 186
IYPLLLD +IN ++EVA A+ + IK LA FP+ + +IFP++ T L NL A+CSSL R
Sbjct: 121 IYPLLLDYIINSDDEVANAASETIKSLARFPDAMSVIFPSETNDPTHLRNLAARCSSLAR 180
Query: 187 VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSA 246
VRVLSLIVKLFS+SR VAS + K+ +L LLE + DTL L++LEL YEL E++HS+
Sbjct: 181 VRVLSLIVKLFSISRLVASEVKKSGILDLLEAEMKGTKDTLVILNVLELYYELMEVEHSS 240
Query: 247 EFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDG 306
EF+ +T+L+QLLCS+I ++T + RA+MISGRLLSK++ + ++E+S K +ISAIDG
Sbjct: 241 EFVPQTSLIQLLCSIISGTSTGPYEKLRAMMISGRLLSKENIYKVVEEASVKALISAIDG 300
Query: 307 RLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAA 366
L ++ D+D E+A++ALGQ+GS+ +GA L+L PPAARHV+ +AFDR HGKQLAA
Sbjct: 301 SLESVEMNDTDAQEAAIDALGQMGSTTKGADLVLSTSPPAARHVVASAFDRNAHGKQLAA 360
Query: 367 LHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLA 426
LH LANIAG+TR + I++ AEESLR LIY+ A++S+KLTPSGLFLSVLQQ++EIRLA
Sbjct: 361 LHALANIAGETRPKSNRIVDGKAEESLRCLIYDAAAQSTKLTPSGLFLSVLQQSSEIRLA 420
Query: 427 GYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
GYR +T LVARPWCL+E+ +K+EIIN VTDA+TE K
Sbjct: 421 GYRTLTALVARPWCLVEILAKEEIINIVTDATTETAK 457
>gi|297830072|ref|XP_002882918.1| hypothetical protein ARALYDRAFT_478950 [Arabidopsis lyrata subsp.
lyrata]
gi|297328758|gb|EFH59177.1| hypothetical protein ARALYDRAFT_478950 [Arabidopsis lyrata subsp.
lyrata]
Length = 519
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/457 (60%), Positives = 354/457 (77%)
Query: 7 MDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLE 66
M+D NQL D+A +FA++PG QN+A+ K+FLDRFPL VI N LQT PD+PG E+TLV CLE
Sbjct: 1 MEDVNQLFDAAFEFAHYPGAQNEASVKEFLDRFPLPVIFNALQTDPDIPGFENTLVTCLE 60
Query: 67 RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYE 126
R+FKTKYGASLIP YMP +QVGL ADS VK LACKTV CLLE+ D +QL++
Sbjct: 61 RLFKTKYGASLIPQYMPVLQVGLKADSAIVKSLACKTVLCLLENCDTNDVSPVQLVVSNC 120
Query: 127 IYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGR 186
IYPLLLD +IN ++EVA A+ + IK LA FP+ + +IFP++ AT L NL A+CSSL R
Sbjct: 121 IYPLLLDYIINSDDEVAHAASETIKSLARFPDAMSVIFPSETNDATHLRNLAARCSSLAR 180
Query: 187 VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSA 246
VRVLSLIVKLFS+SR VAS I K+ LL LLE + DTL L++LEL YEL E++HS+
Sbjct: 181 VRVLSLIVKLFSISRLVASEIKKSGLLDLLEAEMKGTKDTLVILNVLELYYELMEVEHSS 240
Query: 247 EFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDG 306
EF+ +T+L+QLLCS+I ++T + RA+MISGRLLSK++ + ++E+S K +ISA DG
Sbjct: 241 EFVPQTSLIQLLCSIISGTSTGPYEKLRAMMISGRLLSKENIYKVVEEASVKALISATDG 300
Query: 307 RLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAA 366
L ++ D+D E+A++A+GQIGS+ +GA L+L PAARHV+ +AFDR HGKQLAA
Sbjct: 301 SLESVEMNDTDAQEAAIDAIGQIGSTTKGADLVLSTSLPAARHVVASAFDRNAHGKQLAA 360
Query: 367 LHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLA 426
LH LANIAG+TR + I++ AEESLR LIY+VA++S+KLTPSGLFLSVLQQ++EIRLA
Sbjct: 361 LHALANIAGETRPKSNRIVDGKAEESLRCLIYDVAAQSTKLTPSGLFLSVLQQSSEIRLA 420
Query: 427 GYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
GYR +T LVARPWCL+E+ SK+EIIN VTDA+TE K
Sbjct: 421 GYRTLTALVARPWCLVEILSKEEIINIVTDATTETAK 457
>gi|334185365|ref|NP_001189898.1| 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis
thaliana]
gi|332642108|gb|AEE75629.1| 26S proteasome non-ATPase regulatory subunit 5 [Arabidopsis
thaliana]
Length = 551
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/489 (55%), Positives = 354/489 (72%), Gaps = 32/489 (6%)
Query: 7 MDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLE 66
M+D NQL D+A +FA++PG QN+ + K+FLDRFPL VI N LQT PD+PG E+TLV CLE
Sbjct: 1 MEDVNQLFDAAFEFAHYPGAQNETSVKEFLDRFPLPVIFNALQTDPDIPGFENTLVTCLE 60
Query: 67 RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYE 126
R+FKTKYGASLIP YMP +QVGL ADS VK LACKTV CLLED D ++QL+++
Sbjct: 61 RLFKTKYGASLIPQYMPVLQVGLKADSAVVKSLACKTVLCLLEDCDTNDVSSVQLVVNNG 120
Query: 127 IYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGR 186
IYPLLLD +IN ++EVA A+ + IK LA FP+ + +IFP++ T L NL A+CSSL R
Sbjct: 121 IYPLLLDYIINSDDEVANAASETIKSLARFPDAMSVIFPSETNDPTHLRNLAARCSSLAR 180
Query: 187 VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSA 246
VRVLSLIVKLFS+SR VAS + K+ LL LLE + DTL L++LEL YEL E++HS+
Sbjct: 181 VRVLSLIVKLFSISRLVASEVKKSGLLDLLEAEMKGTKDTLVILNVLELYYELMEVEHSS 240
Query: 247 EFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESS---------- 296
EF+ +T+L+QLLCS+I ++T + RA+MISGRLLSK++ + ++E+
Sbjct: 241 EFVPQTSLIQLLCSIISGTSTGPYEKLRAMMISGRLLSKENIYKVVEEARPVVPCLKASV 300
Query: 297 ----------------------AKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQ 334
K +ISAIDG L ++ D+D E+A++ALGQ+GS+ +
Sbjct: 301 CCAHKTSDEVEKLTTNCFVSECVKALISAIDGSLESVEMNDTDAQEAAIDALGQMGSTTK 360
Query: 335 GATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSEDKIILNADAEESLR 394
GA L+L PPAARHV+ +AFDR HGKQLAALH LANIAG+TR + I++ AEESLR
Sbjct: 361 GADLVLSTSPPAARHVVASAFDRNAHGKQLAALHALANIAGETRPKSNRIVDGKAEESLR 420
Query: 395 HLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTV 454
LIY+ A++S+KLTPSGLFLSVLQQ++EIRLAGYR +T LVARPWCL+E+ +K+EIIN V
Sbjct: 421 CLIYDAAAQSTKLTPSGLFLSVLQQSSEIRLAGYRTLTALVARPWCLVEILAKEEIINIV 480
Query: 455 TDASTEQQK 463
TDA+TE K
Sbjct: 481 TDATTETAK 489
>gi|11994507|dbj|BAB02572.1| unnamed protein product [Arabidopsis thaliana]
Length = 566
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/504 (53%), Positives = 346/504 (68%), Gaps = 47/504 (9%)
Query: 7 MDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLE 66
M+D NQL D+A +FA++PG QN+ + K+FLDRFPL VI N LQT PD+PG E+TLV CLE
Sbjct: 1 MEDVNQLFDAAFEFAHYPGAQNETSVKEFLDRFPLPVIFNALQTDPDIPGFENTLVTCLE 60
Query: 67 RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYE 126
R+FKTKYGASLIP YMP +QVGL ADS VK LACKTV CLLED D ++QL+++
Sbjct: 61 RLFKTKYGASLIPQYMPVLQVGLKADSAVVKSLACKTVLCLLEDCDTNDVSSVQLVVNNG 120
Query: 127 IYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGR 186
IYPLLLD +IN ++EVA A+ + IK LA FP+ + +IFP++ T L NL A+CSSL R
Sbjct: 121 IYPLLLDYIINSDDEVANAASETIKSLARFPDAMSVIFPSETNDPTHLRNLAARCSSLAR 180
Query: 187 VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYEL-AEIQHS 245
VRVLSLIVKLFS+SR VAS + K+ LL LLE + DTL L++LEL YE+ AE+ S
Sbjct: 181 VRVLSLIVKLFSISRLVASEVKKSGLLDLLEAEMKGTKDTLVILNVLELYYEMNAEVNGS 240
Query: 246 -AEFLSRTTLL---------QLLCS----LIGNSATETILRSRAIMISGRLLSKDDSHMF 291
A+F R T + Q S L ++T + RA+MISGRLLSK++ +
Sbjct: 241 GAQFRVRATNITYSAVVFYHQFFFSGSYVLYSGTSTGPYEKLRAMMISGRLLSKENIYKV 300
Query: 292 IDESS--------------------------------AKTVISAIDGRLGFLQSQDSDEC 319
++E+ K +ISAIDG L ++ D+D
Sbjct: 301 VEEARPVVPCLKASVCCAHKTSDEVEKLTTNCFVSECVKALISAIDGSLESVEMNDTDAQ 360
Query: 320 ESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRS 379
E+A++ALGQ+GS+ +GA L+L PPAARHV+ +AFDR HGKQLAALH LANIAG+TR
Sbjct: 361 EAAIDALGQMGSTTKGADLVLSTSPPAARHVVASAFDRNAHGKQLAALHALANIAGETRP 420
Query: 380 EDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMITGLVARPW 439
+ I++ AEESLR LIY+ A++S+KLTPSGLFLSVLQQ++EIRLAGYR +T LVARPW
Sbjct: 421 KSNRIVDGKAEESLRCLIYDAAAQSTKLTPSGLFLSVLQQSSEIRLAGYRTLTALVARPW 480
Query: 440 CLMELCSKQEIINTVTDASTEQQK 463
CL+E+ +K+EIIN VTDA+TE K
Sbjct: 481 CLVEILAKEEIINIVTDATTETAK 504
>gi|115465375|ref|NP_001056287.1| Os05g0557200 [Oryza sativa Japonica Group]
gi|49328014|gb|AAT58715.1| unknown protein [Oryza sativa Japonica Group]
gi|113579838|dbj|BAF18201.1| Os05g0557200 [Oryza sativa Japonica Group]
gi|215692829|dbj|BAG88214.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717027|dbj|BAG95390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632518|gb|EEE64650.1| hypothetical protein OsJ_19504 [Oryza sativa Japonica Group]
Length = 526
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/451 (48%), Positives = 313/451 (69%), Gaps = 1/451 (0%)
Query: 13 LLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFKTK 72
+L +A++FA +PG D ++FL+++PL +L LQ++ DVPG+++T+ CL+++F ++
Sbjct: 14 MLRAAAEFASYPGAHGDDTVRQFLEQYPLPKLLGALQSEADVPGMDETIAACLDKVFSSR 73
Query: 73 YGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLL 132
YGAS +P Y F+Q GL A+S + ++LACK V LL+ + +++ + + + +YPLL+
Sbjct: 74 YGASFLPSYGAFIQAGLLANSKNTRQLACKAVIHLLDKAG-DSAVVVDTFVQHNLYPLLM 132
Query: 133 DCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSL 192
+CL G+EE++ S+D IK+LA P GI+IIFP + + + L + AQ SS+ R+R+LSL
Sbjct: 133 NCLTEGDEEISAISLDGIKRLAQIPKGIEIIFPPNGQGSVQLHKVAAQSSSMARIRILSL 192
Query: 193 IVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRT 252
I KLF+VS A+ I+ +NLL+L E+ + + D L+TLS LE+LYEL E HS FL +T
Sbjct: 193 IAKLFAVSTYTATAIYDSNLLSLFEDEIKDRRDMLKTLSALEVLYELVEHPHSNIFLLKT 252
Query: 253 TLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQ 312
LLQL+ +I +S+ ++I+RSRA +ISGRLLS D+ ID + ++ AID L +
Sbjct: 253 NLLQLMVDVINDSSADSIVRSRATLISGRLLSSADAFTTIDRNCVANLLLAIDKLLKMEE 312
Query: 313 SQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLAN 372
SQ++DE ESALEALG IG++ GA LLL AARHV++A+F RQG GKQLAALH +
Sbjct: 313 SQNTDETESALEALGLIGTTSAGACLLLTDSSNAARHVVEASFGRQGRGKQLAALHAFGS 372
Query: 373 IAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMIT 432
I+G R ED+I L+ AEE L+ +Y A S KLTPS L LSVLQQ +IR+ GYR+I+
Sbjct: 373 ISGVDRQEDQIKLDNQAEERLKRFVYTTARNSPKLTPSALLLSVLQQDPDIRITGYRVIS 432
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
GLVAR WCLME+CSK +IIN VTD E K
Sbjct: 433 GLVAREWCLMEICSKLDIINLVTDPKMEMTK 463
>gi|357132616|ref|XP_003567925.1| PREDICTED: uncharacterized protein LOC100830727 [Brachypodium
distachyon]
Length = 523
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/453 (49%), Positives = 313/453 (69%), Gaps = 1/453 (0%)
Query: 11 NQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFK 70
+ LL +A+DFA +PGV D ++FL++FPL +L LQ++ DVPG+++TL CL+++F
Sbjct: 9 DALLRAAADFASYPGVHCDDTVRQFLEQFPLPKLLGVLQSQADVPGVDETLAACLDKVFS 68
Query: 71 TKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPL 130
++YGASL+P+Y F+Q GL +S +++LACK V LL+ + +++ AL + + +YPL
Sbjct: 69 SRYGASLLPNYGEFIQAGLLTNSKIIRQLACKAVLNLLDKAG-DSAVALDTFVQHNLYPL 127
Query: 131 LLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVL 190
L++CLI G+EEV+ +D +K+LA P G DIIFP D + + L + AQ SS+ R+R+L
Sbjct: 128 LINCLIEGDEEVSAIVLDVLKRLAEIPKGTDIIFPPDGQGSLQLNKVAAQSSSMARIRIL 187
Query: 191 SLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLS 250
SLI KLF+VS S A+ I +NLL+L E+ + + D L+TLS LE+LYELAE +S FL
Sbjct: 188 SLIAKLFAVSSSTATAIRDSNLLSLFEDEIKDRKDMLKTLSALEVLYELAEHPNSNIFLL 247
Query: 251 RTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGF 310
+ +LLQ + +I +S ++++RSRA +ISGRLLS D+ M ID+S ++ AID LG
Sbjct: 248 KNSLLQHITDVINDSTADSVIRSRASLISGRLLSSADAFMTIDQSCVTNLLLAIDKILGI 307
Query: 311 LQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGL 370
+SQ++DE ESALEALG IG++ QGA L A+HV+ +F+RQG GKQLAALH
Sbjct: 308 EESQNTDEIESALEALGLIGATTQGACFLFTDSSNVAKHVVQLSFNRQGRGKQLAALHAF 367
Query: 371 ANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRM 430
+I G R ED++ L AEE L+ L+Y VAS S KLTPS L LSVLQQ +IR+AGYR+
Sbjct: 368 GSICGVDRQEDQMKLGDQAEERLKRLVYTVASDSPKLTPSALLLSVLQQDPDIRIAGYRV 427
Query: 431 ITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
I+ LV R WCL E+CSK EII VTD E K
Sbjct: 428 ISRLVVREWCLREVCSKSEIIRVVTDPKMETTK 460
>gi|218197248|gb|EEC79675.1| hypothetical protein OsI_20936 [Oryza sativa Indica Group]
Length = 526
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/451 (48%), Positives = 312/451 (69%), Gaps = 1/451 (0%)
Query: 13 LLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFKTK 72
+L +A++FA +PG D ++FL+++PL +L LQ++ DVPG+++T+ CL+++F ++
Sbjct: 14 MLRAAAEFASYPGAHGDDTVRQFLEQYPLPKLLGALQSEADVPGMDETIAACLDKVFSSR 73
Query: 73 YGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLL 132
YGAS +P Y F+Q GL A+S + ++LACK V LL+ + +++ + + + +YPLL+
Sbjct: 74 YGASFLPSYGAFIQAGLLANSKNTRQLACKAVIHLLDKAG-DSAVVVDTFVQHNLYPLLM 132
Query: 133 DCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSL 192
+CL G+EE++ S+D IK+LA P GI+IIFP + + + L + AQ SS+ R+R+LSL
Sbjct: 133 NCLTEGDEEISAISLDGIKRLAQIPKGIEIIFPPNGQGSVQLHKVAAQSSSMARIRILSL 192
Query: 193 IVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRT 252
I KLF+VS A+ I+ +NLL+L E+ + + D L+TLS LE+LYEL E HS FL +T
Sbjct: 193 IAKLFAVSTYTATAIYDSNLLSLFEDEIKDRRDMLKTLSALEVLYELVEHPHSNIFLLKT 252
Query: 253 TLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQ 312
LLQL+ +I +S+ ++I+RSRA +ISGRLLS D+ ID + ++ AID L +
Sbjct: 253 NLLQLMVDVINDSSADSIVRSRATLISGRLLSSADAFTTIDRNCVANLLLAIDKLLKMEE 312
Query: 313 SQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLAN 372
S ++DE ESALEALG IG++ GA LLL AARHV++A+F RQG GKQLAALH +
Sbjct: 313 SLNTDETESALEALGLIGTTSAGACLLLTDSSNAARHVVEASFGRQGRGKQLAALHAFGS 372
Query: 373 IAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMIT 432
I+G R ED+I L+ AEE L+ +Y A S KLTPS L LSVLQQ +IR+ GYR+I+
Sbjct: 373 ISGVDRQEDQIKLDNQAEERLKRFVYTTARNSPKLTPSALLLSVLQQDPDIRITGYRVIS 432
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
GLVAR WCLME+CSK +IIN VTD E K
Sbjct: 433 GLVAREWCLMEICSKLDIINLVTDPKMEMTK 463
>gi|226501818|ref|NP_001145467.1| uncharacterized protein LOC100278856 [Zea mays]
gi|195656637|gb|ACG47786.1| hypothetical protein [Zea mays]
Length = 524
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/451 (47%), Positives = 316/451 (70%), Gaps = 2/451 (0%)
Query: 13 LLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFKTK 72
+L +A+DFA +PG+ +D ++FL+R PL +L LQ++ DVPG+ +T+ CL++IF ++
Sbjct: 13 MLRAAADFASYPGLHSDDTVRQFLERCPLPKLLGALQSEADVPGMVETVTECLDKIFSSR 72
Query: 73 YGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLL 132
YGASL+P+Y F+Q GL DS +++LACK V LL+ ++ + + A++ ++ + +YPLL+
Sbjct: 73 YGASLLPNYGAFIQAGLLTDSKQIRKLACKAVLHLLDKAE-DGAAAVETVVQHNLYPLLI 131
Query: 133 DCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSL 192
CLI G+EE++ +D +K+LA P G ++IFP D + + LG + AQ SSL R+R+LSL
Sbjct: 132 KCLIEGDEEISAIVLDTVKRLAQIPKGAEVIFPPDGQGSVQLGKVAAQSSSLARIRILSL 191
Query: 193 IVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRT 252
I KLF+VS A+VI +NLL++ EE + + D L+TLS LE+LYEL E HS FL +T
Sbjct: 192 IAKLFTVSSYTATVIRDSNLLSIFEEEIKDRRDMLKTLSALEVLYELVEHPHSNIFLLKT 251
Query: 253 TLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQ 312
LLQL+ +I +S+ ++++RSRA +SGRLLS D+ ID+S ++ AID L +
Sbjct: 252 NLLQLIIDIINDSSADSVIRSRAASVSGRLLSSADAFTAIDKSCVTNLLVAIDRILKMEE 311
Query: 313 SQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLAN 372
S+++DE ESALE LG IG++ QGA LL ARHV++++FDRQG G+QLAALH +
Sbjct: 312 SKNTDEIESALETLGLIGTTSQGAHFLLTS-SNVARHVVESSFDRQGRGRQLAALHAFGS 370
Query: 373 IAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMIT 432
I G R ED++ L+++AEE+L+ L+Y A+ S KLTPS L LSVLQQ ++R+AGYR+IT
Sbjct: 371 ICGVGRQEDQMKLDSEAEENLKRLVYTTAANSPKLTPSALLLSVLQQDPDVRIAGYRVIT 430
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
GLV R WCL E+C EII VTD + E K
Sbjct: 431 GLVIREWCLREVCLNSEIIRFVTDPTMETTK 461
>gi|413946456|gb|AFW79105.1| hypothetical protein ZEAMMB73_239741 [Zea mays]
Length = 524
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/451 (47%), Positives = 314/451 (69%), Gaps = 2/451 (0%)
Query: 13 LLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFKTK 72
+L +A+DFA +PG+ +D ++FL+R PL +L LQ++ DVPG+ +T+ CL++IF ++
Sbjct: 13 MLRAAADFASYPGLHSDDTVRQFLERCPLPKLLGALQSEEDVPGMVETVTECLDKIFSSR 72
Query: 73 YGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLL 132
YGASL+P+Y F+Q GL DS +++LACK V LL+ ++ + A++ ++ + +YPLL+
Sbjct: 73 YGASLLPNYGAFIQAGLLTDSKQIRKLACKAVLHLLDKAE-DGGAAVETVVQHNLYPLLI 131
Query: 133 DCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSL 192
CLI G+EE++ +D +K+LA P G ++IFP D + + LG + AQ SSL R+R+LSL
Sbjct: 132 KCLIEGDEEISAIILDTVKRLAQIPKGAEVIFPPDGQGSVQLGKVAAQSSSLARIRILSL 191
Query: 193 IVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRT 252
I KLF+VS A+ I +NLL++ EE + + D L+TLS LE+LYEL E HS FL +T
Sbjct: 192 IAKLFTVSSYTATAIRDSNLLSIFEEEIKDRRDMLKTLSALEVLYELVEHPHSNIFLLKT 251
Query: 253 TLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQ 312
LLQL+ +I +S+ ++++RSRA ++SGRLLS D+ ID+S ++ AI L +
Sbjct: 252 NLLQLIIDIINDSSADSVIRSRAALVSGRLLSSADAFTAIDKSCVTNLLIAIGRILKMEE 311
Query: 313 SQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLAN 372
S+++DE ESALE LG IG++ QGA LL ARHV++++FDRQG G+QLAALH N
Sbjct: 312 SKNTDEIESALETLGLIGTTSQGAHFLLTS-SNVARHVVESSFDRQGRGRQLAALHAFGN 370
Query: 373 IAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMIT 432
I G R ED++ L+++AEE+L+ L+Y A+ S KLTPS L LSVLQQ ++R+AGYR+IT
Sbjct: 371 ICGVGRQEDQMKLDSEAEENLKRLVYTTAANSPKLTPSALLLSVLQQDPDVRIAGYRVIT 430
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
GLV R WCL E+C EII VTD + E K
Sbjct: 431 GLVIREWCLREVCLNSEIIRFVTDPTMETTK 461
>gi|242088793|ref|XP_002440229.1| hypothetical protein SORBIDRAFT_09g028070 [Sorghum bicolor]
gi|241945514|gb|EES18659.1| hypothetical protein SORBIDRAFT_09g028070 [Sorghum bicolor]
Length = 523
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/451 (47%), Positives = 308/451 (68%), Gaps = 3/451 (0%)
Query: 13 LLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFKTK 72
+L +A+DFA +PG+ +D ++FL+R PL +L LQ++ DVPG+ +T+ CL++IF ++
Sbjct: 13 MLRAAADFASYPGLHSDDTVRQFLERCPLPKLLGALQSEADVPGMVETVTECLDKIFSSR 72
Query: 73 YGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLL 132
YGASL+P Y F+Q GL DS +++LACK V LL+ + E A++ ++ + ++PL++
Sbjct: 73 YGASLLPSYGAFIQAGLLTDSKQIRKLACKAVLHLLDKA--EDGAAVETVVQHNLFPLMI 130
Query: 133 DCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSL 192
+CLI G+EE++ +D +K+LA P G ++IFP D + + LG + AQ SSL R+R+LSL
Sbjct: 131 NCLIEGDEEISAIILDTVKRLAQIPKGAEVIFPPDGQGSVQLGKVAAQSSSLPRIRILSL 190
Query: 193 IVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRT 252
I KLF+VS AS I NLL++ EE + D L+TLS LE+LYEL E HS FL +T
Sbjct: 191 IAKLFTVSSYTASAIRDTNLLSIFEEEIKDTRDMLKTLSALEVLYELVEHPHSNIFLLKT 250
Query: 253 TLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQ 312
LLQL+ +I +S+ ++++RSRA +ISGRLLS D+ ID+S ++ AID L +
Sbjct: 251 NLLQLIVDIINDSSADSVIRSRAALISGRLLSSADAFTAIDKSCVTNLLVAIDKILKMEE 310
Query: 313 SQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLAN 372
SQ++DE ESALE LG IG++ QGA LL ARHV+ ++FDRQG G+QLAALH +
Sbjct: 311 SQNTDEIESALETLGLIGTTSQGAHFLLTS-SNVARHVVKSSFDRQGRGRQLAALHAFGS 369
Query: 373 IAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMIT 432
I G R ED++ L+ +AE +L+ L+Y A+ S KLTPS LS+LQQ +IR+AGYR+I+
Sbjct: 370 ICGMDRQEDQMKLDDEAEGNLKRLVYTTAANSPKLTPSAALLSILQQDPDIRIAGYRVIS 429
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
GLV R WCL E+C EII VTD + E K
Sbjct: 430 GLVIREWCLREVCLNSEIIRFVTDPTMETTK 460
>gi|326510313|dbj|BAJ87373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 528
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/469 (46%), Positives = 313/469 (66%), Gaps = 11/469 (2%)
Query: 1 MDEELSMD--DSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLE 58
MD MD + + +A+DFA +PGV + A ++FL++FPL +L LQ++ P
Sbjct: 1 MDAAAEMDAGELEAVFRAAADFASYPGVHGEDAVRQFLEQFPLHDLLGALQSQGAEPETV 60
Query: 59 DTLVVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLL---EDSDLEA 115
+T+ CL+++F ++YGASL+P Y F++ GL + +++++LACK V LL EDSD+
Sbjct: 61 ETVAACLDKVFSSRYGASLLPSYAAFIEAGLLTNLNNIRQLACKAVVHLLDKAEDSDV-- 118
Query: 116 SCALQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLG 175
A+ + + +YPLL++CLI G+EE++ +DAIK+LA P G DIIFP D + L
Sbjct: 119 --AVDTFVQHNLYPLLINCLIEGDEEISAIVLDAIKRLAEIPKGTDIIFPPDGQG-LQLN 175
Query: 176 NLVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILEL 235
+ AQ SS+ R+R+LSLI KLF+ S A+ I +NLL+L E+ + + D L+TLS LE+
Sbjct: 176 KVAAQSSSMARIRILSLIAKLFAASSCTATAIRDSNLLSLFEDEIKDRKDMLKTLSALEV 235
Query: 236 LYELAEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDES 295
LYELAE HS FL +T+LLQ + +I + + ++I+RSRA +ISGRLL+ D+ M I++S
Sbjct: 236 LYELAEHPHSNMFLLKTSLLQHITDVINDPSADSIVRSRASLISGRLLASADAFMTIEQS 295
Query: 296 SAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAF 355
++ AID L +SQ++DE ESALE LG IG++ QGA LL P A+HV++ +F
Sbjct: 296 CVTNLLLAIDKILRTEESQNTDEIESALETLGLIGTTSQGACLLFSDPPNVAKHVVEMSF 355
Query: 356 DRQGHGKQLAALHGLANIAGKTRSEDKIIL-NADAEESLRHLIYEVASRSSKLTPSGLFL 414
DRQG GKQLAALH +I G R ED++ L + AEE L+ L+Y AS S KLTPS L L
Sbjct: 356 DRQGRGKQLAALHAFGSICGVDREEDQMKLDDYQAEECLKRLVYSAASNSPKLTPSALLL 415
Query: 415 SVLQQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
S+LQQ ++R+AGYR+++GLV R WCL E+CSK EII VTD E K
Sbjct: 416 SILQQDPDVRIAGYRVLSGLVVREWCLREVCSKPEIIGVVTDPKMETTK 464
>gi|217074876|gb|ACJ85798.1| unknown [Medicago truncatula]
Length = 324
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/328 (61%), Positives = 253/328 (77%), Gaps = 4/328 (1%)
Query: 1 MDEELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDT 60
MDE+ S QLL +A+DFA +PG +D +A FL+RFPL +I+N LQT+ DVPGLE T
Sbjct: 1 MDEQ----SSQQLLQAATDFANYPGSHSDDSATDFLNRFPLPLIINALQTQFDVPGLETT 56
Query: 61 LVVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQ 120
LVVCLER+FKTK+GASLIP YM FVQVGL +DS +V+ LACKTVT LLE+ D + A
Sbjct: 57 LVVCLERLFKTKFGASLIPQYMQFVQVGLQSDSQAVRSLACKTVTSLLENLDNSYTVAAH 116
Query: 121 LLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQ 180
L+ ++ IYPLLLDCLINGNEEVA ++DAIKKLA F G+DIIFP+ TDLG + +Q
Sbjct: 117 LIKEFNIYPLLLDCLINGNEEVAAGAIDAIKKLASFSEGLDIIFPSTKGGDTDLGIIASQ 176
Query: 181 CSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELA 240
CSSLGRVRVL+L+VKLFSVS S AS I NLL LLE + +DTL TLS+ ELLYELA
Sbjct: 177 CSSLGRVRVLALVVKLFSVSTSAASAICSLNLLKLLEAEIRSTDDTLVTLSVFELLYELA 236
Query: 241 EIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTV 300
E++H EFLS+T+L QLL S+I + + ++ILRSRA+MISGRLLSK++++ FIDE AK+V
Sbjct: 237 EVEHGTEFLSKTSLFQLLSSIISDDSKDSILRSRAMMISGRLLSKENTYSFIDEPCAKSV 296
Query: 301 ISAIDGRLGFLQSQDSDECESALEALGQ 328
IS+IDGRL L + DE E+ALE+LGQ
Sbjct: 297 ISSIDGRLQSLDPSNKDEFETALESLGQ 324
>gi|294461618|gb|ADE76369.1| unknown [Picea sitchensis]
Length = 526
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/440 (46%), Positives = 287/440 (65%)
Query: 24 PGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFKTKYGASLIPHYMP 83
PG DAA K+FLDRFPL +I L+ DVPGLE +LV CLERI KT YG SL+P +P
Sbjct: 25 PGHLTDAAVKEFLDRFPLPLIFIALKNGFDVPGLEGSLVSCLERILKTSYGVSLLPQCVP 84
Query: 84 FVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVA 143
+ Q GL A+ ++L+CK + LLE+SD + ++ ++DY ++P ++ CL + +E VA
Sbjct: 85 YAQAGLKANFPLTRQLSCKAIAQLLENSDKDEGVGVRAIVDYGVWPSIVVCLADSDESVA 144
Query: 144 TASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSV 203
TA+ +A+K LA G+++IFPA + T L SS+ R+R+L++I LF +S
Sbjct: 145 TAAAEAVKNLAKSTRGLELIFPAKAEEDTLLKEFTMNSSSMVRIRILAIIAALFGISDEA 204
Query: 204 ASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIG 263
A+ + ++ LL + E+ ++ D L TL++LE+LYE+ +A+FL +LLQ L + I
Sbjct: 205 ATAVHQSGLLGMFEQELNGTTDMLATLNVLEVLYEIVATPIAAKFLLTKSLLQRLAATIS 264
Query: 264 NSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECESAL 323
NSA ++ILRSR++ IS RLLS D + +DE K + AID L L++ DS+E E AL
Sbjct: 265 NSAVDSILRSRSMTISARLLSSDSIYSGVDEFDVKNAVQAIDMDLERLKATDSNEREIAL 324
Query: 324 EALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSEDKI 383
+AL QIG+ ++GA LLL PP ARH +DA F QLA+ H LA+I+G+ RS+
Sbjct: 325 DALSQIGTVMRGAELLLCNTPPTARHAVDATFSHGWRNIQLASTHALASISGQERSQSTQ 384
Query: 384 ILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAEIRLAGYRMITGLVARPWCLME 443
+LN AE LR+LIY A SSK +PSGL S+LQQ EIRLA YR+I GLV RPWCL E
Sbjct: 385 LLNDQAETCLRNLIYTAAENSSKRSPSGLLWSLLQQDPEIRLAAYRLIAGLVTRPWCLWE 444
Query: 444 LCSKQEIINTVTDASTEQQK 463
+C+KQEIIN VT+ +E K
Sbjct: 445 VCAKQEIINLVTNPHSETTK 464
>gi|168028294|ref|XP_001766663.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682095|gb|EDQ68516.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 267/463 (57%), Gaps = 21/463 (4%)
Query: 16 SASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFKTKYGA 75
+AS+F+ +PG +DA+A+ FL +FPL V+L+ L+T DVPGLE ++ + LERIF+T YG
Sbjct: 8 AASEFSNYPGDISDASAESFLSKFPLPVLLSALETGRDVPGLESSVALSLERIFQTAYGK 67
Query: 76 SLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCL 135
L+P + + VGL A+S V++L C + LLE + + A++ + + + LL +
Sbjct: 68 KLLPQTLSYAGVGLKAESSLVRKLTCSAIGDLLEGGETDGGAAVRAIAEAHLAAPLLLAI 127
Query: 136 INGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVK 195
+G+ VA A+ DA+ KLA P G+++IF A A L ++ +Q S+ R+R LS+
Sbjct: 128 GDGDAHVAKAAADALGKLARNPGGLELIFTAKGAGAGLLKDMASQSSATVRIRALSMAAS 187
Query: 196 LFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLL 255
+F +S A+ + + + T+L + +D L L+ LELL +LA H A+FL L+
Sbjct: 188 IFGISEEAAAAVQDSGIFTVLAAELDNSDDMLAQLNALELLCDLAATSHGAKFLLAGNLI 247
Query: 256 QLLCSLIGNSATETILRSRAIMISGRLLSKDD----SHMFIDESSAKTVISAIDGRLGFL 311
L S I N A ++++RSRA+ ++ RL+ D S + + E+S ++ A L L
Sbjct: 248 GRLTSTICNLALDSLVRSRAMTVAARLIPLYDESPGSPLSVREASG--IVHAFGELLKHL 305
Query: 312 -------QSQDSDECESALEALGQIGSSIQGATLLL---LCLPPAARHVIDAAFDRQGHG 361
Q+ ++ E E+AL AL I +++GA LL + + RH++ AAF +
Sbjct: 306 EELNDKGQTTETTEYENALNALSFIAKTVKGAELLFDHTMVI----RHMVKAAFLDRTLC 361
Query: 362 KQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVA-SRSSKLTPSGLFLSVLQQA 420
+LA L LA +AG R ++L+ +E L+ +IY A RS TP+G+FL QQ+
Sbjct: 362 IKLAGLQVLATVAGSERDPSNVLLSESSEAQLKDMIYSAAEERSPTRTPAGMFLIFFQQS 421
Query: 421 AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
E+RLA YR + ++AR WCL ELC+ +E+++ + DA E K
Sbjct: 422 TEVRLAMYRFTSPMLARLWCLRELCASREVVDYLLDARLEISK 464
>gi|356545478|ref|XP_003541169.1| PREDICTED: uncharacterized protein LOC100782437 [Glycine max]
Length = 378
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/172 (71%), Positives = 140/172 (81%), Gaps = 3/172 (1%)
Query: 295 SSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAA 354
+ K VIS+IDGRL L + D DECE+ALE+LG +GS IQGATLLL PAARHVIDAA
Sbjct: 144 AGVKVVISSIDGRLQSLDALDRDECETALESLGHMGSYIQGATLLLSGSSPAARHVIDAA 203
Query: 355 FDRQG---HGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSG 411
F+ QG HGKQL LH L NI+GKTRSE+ IILNA+AE +LR LIYE ASRS+KLTPSG
Sbjct: 204 FEGQGPTGHGKQLFTLHALGNISGKTRSENSIILNAEAEVNLRRLIYETASRSTKLTPSG 263
Query: 412 LFLSVLQQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
LFLSVLQQ +E+RLAGYRM++ LVARPWCLME+CSKQEIIN VTD STE K
Sbjct: 264 LFLSVLQQDSEMRLAGYRMLSELVARPWCLMEICSKQEIINKVTDPSTETTK 315
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 108/134 (80%), Gaps = 2/134 (1%)
Query: 7 MDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLE 66
M DS+QLL++ASDFA++ G +D +A+ FL+RFPL VI + LQT+ DVPGLE+TLV CLE
Sbjct: 1 MVDSSQLLEAASDFAHYTGAHSDDSARDFLNRFPLPVIFSALQTQFDVPGLENTLVTCLE 60
Query: 67 RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLE--DSDLEASCALQLLID 124
R+F TK GASLIP YMPFVQVGL ADS +V+ LACKTVTCL+E D+D + + +++L+ D
Sbjct: 61 RLFNTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLIENLDNDHKVAASVRLIKD 120
Query: 125 YEIYPLLLDCLING 138
+ +YPLLLDC I G
Sbjct: 121 FNMYPLLLDCFIKG 134
>gi|302787879|ref|XP_002975709.1| hypothetical protein SELMODRAFT_442892 [Selaginella moellendorffii]
gi|300156710|gb|EFJ23338.1| hypothetical protein SELMODRAFT_442892 [Selaginella moellendorffii]
Length = 512
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 254/464 (54%), Gaps = 30/464 (6%)
Query: 9 DSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERI 68
D+N LL ASD A HPG +++ FL ++P V+ + L T + P L +V +E+I
Sbjct: 11 DTNLLLVEASDLAAHPGALPESSVSDFLAKYPFPVLFSVLSTA-ETPELVSAIVNAVEKI 69
Query: 69 FKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIY 128
++ +G S++ +P+ GL A S ++RLAC ++T LED D S ++Q D I
Sbjct: 70 LQSPFGHSMLIGVLPYANAGLNAASPQIRRLACFSITKYLEDGD---SSSVQTAADAGIM 126
Query: 129 PLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVR 188
LL + + + VA + DAI+ LA G+++IF A + L L SSL ++R
Sbjct: 127 DPLLSTICDEDSSVAKEASDAIENLAKSSAGLEVIFGASQNS---LKELAIHGSSLVQIR 183
Query: 189 VLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEF 248
LSL ++F +S A+ + + +L++LE + +DTL L+ E+L ELAE A
Sbjct: 184 ALSLAARIFGLSDVAAAAVQTSGILSVLEGQLKNSSDTLAQLNAFEILSELAETPAGARL 243
Query: 249 LSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRL 308
L T + L I N+ ++++RSR++ ++ RL+ I E A +I AI L
Sbjct: 244 LLAGTFVSQLVFWIQNAEVDSMVRSRSMQVASRLIKT------ISEPDALQIIDAIGNCL 297
Query: 309 GFLQS-------QDSDECESALEALGQIGSSIQGATLLLL--CLPPAARHVIDAAFDRQG 359
G +++ D DE ++AL+ALGQIGS GA +LLL PPA +V+ +AF
Sbjct: 298 GRVENFARSSERWDKDEKDAALDALGQIGSFSHGAQVLLLRGARPPAL-YVVHSAFK--- 353
Query: 360 HGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQ 419
+LA +H LA IAG R + ++LN AE LR LI++ SS+ T S L +L+Q
Sbjct: 354 --PELAGIHALALIAGSER--EDVLLNEQAENVLRDLIFDAIHVSSQKTLSNSLLHLLKQ 409
Query: 420 AAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
AE+R A YR++ L +R WCL+E+ S +++ + D+ E K
Sbjct: 410 TAELRQAVYRLLVPLASRTWCLLEVSSNDGLVDFIVDSRIESSK 453
>gi|147793826|emb|CAN62354.1| hypothetical protein VITISV_022417 [Vitis vinifera]
Length = 298
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 117/168 (69%), Gaps = 15/168 (8%)
Query: 298 KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDR 357
KTVIS IDGRL L+SQD+DECESALEALGQIGSSI GA LLLL PPAARHVIDAAFDR
Sbjct: 81 KTVISLIDGRLRSLESQDADECESALEALGQIGSSIHGAELLLLSSPPAARHVIDAAFDR 140
Query: 358 QGHGKQL--AALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLS 415
QG G+QL + L K + ++ LR Y+ + GLFLS
Sbjct: 141 QGRGRQLIGVCMWPLHTTISKPQG---------SKSRLRPKFYQYGGDFGQ----GLFLS 187
Query: 416 VLQQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
VLQQ AE+RLAGYR+ITGLVARPWCLME+CSKQEI+N +T A +E K
Sbjct: 188 VLQQDAEVRLAGYRVITGLVARPWCLMEICSKQEIVNIITGAHSETTK 235
>gi|302783763|ref|XP_002973654.1| hypothetical protein SELMODRAFT_413906 [Selaginella moellendorffii]
gi|300158692|gb|EFJ25314.1| hypothetical protein SELMODRAFT_413906 [Selaginella moellendorffii]
Length = 451
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 223/464 (48%), Gaps = 84/464 (18%)
Query: 9 DSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERI 68
D+N LL AS+ A HPG +++ FL ++P V+ + L T + P L +V +E+I
Sbjct: 11 DTNLLLVEASNLAAHPGALPESSVSDFLAKYPFPVLFSVLSTA-ETPELVSAIVNAVEKI 69
Query: 69 FKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIY 128
++ PF HS
Sbjct: 70 LQS-----------PF--------GHS--------------------------------- 77
Query: 129 PLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVR 188
+L+ L N + A I++LA F +IIF A + L L SSL ++R
Sbjct: 78 -MLIGVLPYANAGL-NAGSPQIRRLACFS---EIIFGASQNS---LKELAIHGSSLVQIR 129
Query: 189 VLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEF 248
LSL ++F +S A+ + + +L +LE + +DTL L+ E+L ELAE A
Sbjct: 130 ALSLAARIFGLSDVAAAAVQTSGILFVLEGQLKNSSDTLAQLNAFEILSELAETPTGARL 189
Query: 249 LSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRL 308
L T + L I N+ ++++RSR++ ++ RL+ I E A +I AI L
Sbjct: 190 LLAGTFVSQLVFWIQNAEVDSMVRSRSMQVASRLIKT------ISEPDALQIIDAIGNCL 243
Query: 309 GFLQS-------QDSDECESALEALGQIGSSIQGATLLLL--CLPPAARHVIDAAFDRQG 359
G +++ D DE ++AL+ALGQIGS GA +LLL PPA +V+ +AF
Sbjct: 244 GRVENLARSSERWDKDEKDAALDALGQIGSFSHGAQVLLLRGARPPAL-YVVHSAFK--- 299
Query: 360 HGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQ 419
+LA +H LA IAG R + ++LN AE LR LI++ SS+ T S L +L+Q
Sbjct: 300 --PELAGIHALALIAGSER--EDVLLNEQAENVLRDLIFDAIHVSSQKTLSNSLLHLLKQ 355
Query: 420 AAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
AE+R A YR++ L +R WCL+E+ S +++ + DA E K
Sbjct: 356 TAELREAVYRLLVPLASRTWCLLEVSSNDGLVDFIVDARIESSK 399
>gi|384253743|gb|EIE27217.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 441
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 161/367 (43%), Gaps = 49/367 (13%)
Query: 126 EIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLG 185
+I L+ L + + VA + + + A P+G +++ + +L ++
Sbjct: 22 QIAGTLISALTDPDTGVAAEASSTLTRSAAQPDGYELLVGEGGR--QELQRVLGSSDPSI 79
Query: 186 RVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELL--------- 236
R+R LSL+ L SV++ + + LL L+ +S D L + L L+
Sbjct: 80 RMRGLSLLASLASVAQDNIRALHDSGLLQPLQAELSNTTDILTCSAALALVGELSEASSS 139
Query: 237 ----------YELAEIQHSAE-FLSRTTLLQLLC--SLIGNSATETILRSRAIMISGRLL 283
+L+ +QH+++ FL L + C SL+ + T+L S A +G +
Sbjct: 140 ASSALMALLEPQLSALQHNSDPFLRSQALKAIHCLPSLV----SATLLASSAQQPTGAVA 195
Query: 284 SKDDSHMFIDESSAKTVISAIDGRLGFLQSQDS------DECESALEALGQIGSSIQGAT 337
+ H D + S L L DS D E+AL+A+ ++G+S GA
Sbjct: 196 ---NGHAGADAGPPPLLQS-----LAELLDPDSLAEPSADLVEAALDAVSRLGASPSGAE 247
Query: 338 LLLLCLPPAARHVIDAAFDRQGHGKQL--AALHGLANIAGKTRSEDKIILNADAEESLRH 395
L HV A R G G Q+ AALH L +AG R++ ++A AE++ R
Sbjct: 248 LFFADAHGLPAHVATLALGRAG-GTQIRTAALHALGIVAGAHRADHA--MSAPAEDTFRQ 304
Query: 396 LIYEVASRSSKL-TPSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINT 453
+ + A+ S P+ L L L+Q A++R YR++ L R W E+C +++
Sbjct: 305 VTFTAAAGPSGFQAPAELLLGFLRQPFADLRTGAYRLLRALAQRTWGAAEVCRNAQLMER 364
Query: 454 VTDASTE 460
+ D +E
Sbjct: 365 LGDPRSE 371
>gi|147768176|emb|CAN71644.1| hypothetical protein VITISV_041775 [Vitis vinifera]
Length = 392
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 1 MDEELSMDDSNQLLDSASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTK 51
M+EE ++DD LL +ASDF +HPGV +DA+AK FL RFPL VI+N + +
Sbjct: 1 MEEEYTLDDPTLLLQAASDFGHHPGVHSDASAKAFLHRFPLPVIINGCKNR 51
>gi|410903614|ref|XP_003965288.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
isoform 1 [Takifugu rubripes]
Length = 504
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 100/414 (24%), Positives = 183/414 (44%), Gaps = 46/414 (11%)
Query: 65 LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLID 124
LERI L+ Y +Q GLT + +VK LA + +LE D A ++L +
Sbjct: 68 LERILIALSPVCLVQKYRAELQAGLTHPNDTVKILALTQIGRILEHPD----AATEVLNN 123
Query: 125 YEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSL 184
+++ ++ C+ VA ++ + KL+ G+D +F D A L +++A S +
Sbjct: 124 HDVLQAVIQCIREEKIAVAKQAIQCLSKLSHSKPGLDKLFHGDLLAV--LKDVMA-TSDI 180
Query: 185 GRVRVLSLIVKLFSVSR----SVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELA 240
R R+ L+V++ SVS A+ F + LL G +D L + +E++ LA
Sbjct: 181 VRYRIYELVVEISSVSPISLGYCANSSFISQLL-----GELTGDDVLVRATAIEMVTTLA 235
Query: 241 EIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKT- 299
+ QH ++L++ ++ + ++I + T++ ++ I G L K ++ I +S +
Sbjct: 236 QSQHGRQYLAQQGIMDKISNMIRGAETDSF---SSLYIPG--LVKFFGNLAIMDSPQQVC 290
Query: 300 -VISAIDGRLGFLQSQDSDECES--ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD 356
A ++ F + D D + AL+ LG +GS+I+G +L R V+
Sbjct: 291 ETYPAFQNKV-FEMALDPDPVMNGVALDTLGLLGSTIEGKQVLQKT-GEQFRTVLRRMSQ 348
Query: 357 RQGHG------KQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPS 410
G + L A+ L + + ++ED + L ES HL+ + P
Sbjct: 349 LASSGATELRVRSLDAISQLLTLQPEQQTEDLLALT----ESWFHLLSK--------QPM 396
Query: 411 GLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ ++ Q E+ R+ T + +PW + S + V D ST Q K
Sbjct: 397 DMIRNISTQPFPELHCGALRIFTAIATQPWGQRLMVSTPSFMEFVLDRSTGQTK 450
>gi|351698920|gb|EHB01839.1| 26S proteasome non-ATPase regulatory subunit 5 [Heterocephalus
glaber]
Length = 504
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 166/393 (42%), Gaps = 44/393 (11%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQKGLTHPDDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL N V + + + R RV L+V++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKTNDVVRYRVYELVVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ L+T L ++ + D L + +E++ LA H +FL++ ++ + ++I
Sbjct: 201 RYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTPHGRQFLAQEGVIDQISNIIVG 259
Query: 265 SATETILR---SRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + G L D + ++ +SQD
Sbjct: 260 ADSDPFFSFYLPGFVKFFGNLAVMDSPQQICERYPV-----FVEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GSS++G +L H I F+R L + + A T +E
Sbjct: 315 AVDTIGILGSSVEGKQVL---------HKIGTRFER--------LLMRIGHQAKNTSTEL 357
Query: 382 KI--------ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRM 430
KI +L E+ L+ S S L+ P LF + Q E+ A ++
Sbjct: 358 KIRCLDAISSLLYLPPEQQTDDLLRMTESWFSSLSWDPLELFRGISNQPFPELHCAALKV 417
Query: 431 ITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
T + +PW + + + V D S E K
Sbjct: 418 FTAIADQPWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|194225690|ref|XP_001501707.2| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
[Equus caballus]
Length = 504
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 168/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT S SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPSDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQVVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL N V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E + LA H ++L++ ++ + ++I
Sbjct: 201 NYCATSGLVTQLLRELTGE-DVLVRATCIETVTSLASTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + A ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAIMDSPQQVCERYPA-----FVEKVFEMTESQDPTMVGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ + + +L K R D
Sbjct: 315 AVDTIGILGSNVEGKQVLQKTGTRFERLLVKIGYQAKNASTEL-----------KIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
+ +L E+ L+ S S L+ P LF + Q ++R A ++ T +
Sbjct: 364 ALSSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISNQPFPDLRCAALKVFTAIAD 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E+ K
Sbjct: 424 QPWAQKLMFNSPGFVEYVMDRSVERDK 450
>gi|440798342|gb|ELR19410.1| HEAT repeat domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 503
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 190/425 (44%), Gaps = 57/425 (13%)
Query: 58 EDTLVVCLERIFKTKYGAS-----LIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSD 112
ED L+ + I K G S L PF+ GLTA +V+ L +
Sbjct: 57 EDDLLEIVREIRKRLAGPSGLHILLSDQVKPFLTGGLTAALPAVRELTLAQLAR------ 110
Query: 113 LEASCALQ-LLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAA 171
AS Q + E++P ++ + + N VAT ++ I +A G +++F + +
Sbjct: 111 -TASAGPQGFALLTEVWPAIVKSVADSNLRVATIAVQTILTVAKEAVGQELVF---SSTS 166
Query: 172 TDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKA-NLLTLLEEGVSKKNDTLETL 230
+ + N + S + R+RVL L V+L S A ++ ++ + L L+ + K D L+ +
Sbjct: 167 SSMFNGMIIESEVLRLRVLDLFVEL---SLQSAELLERSKDYLGLMSRELDSK-DLLQRM 222
Query: 231 SILELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSATE--TILRSRAIMISGRLLSKDDS 288
++LELL +LA+ +H ++ + + + L+ ++ ++L A+ RLL+
Sbjct: 223 NVLELLEKLAKTEHGVAYVQSSGAMASILHLLTDTEDPGFSLLCGSAL----RLLASIAR 278
Query: 289 HMFI--DESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPA 346
I D S V+ ++ L+S+D E+A+ +G +GS++ GA LLL +
Sbjct: 279 QQGIGGDLQSFVPVLKVVEQ---LLESRDESCAEAAISFVGALGSTVAGAELLL-----S 330
Query: 347 ARHVIDAAFDRQGHGK---QLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASR 403
R ++ + F+ +L+ LH LA +++ D E++L I+ V +
Sbjct: 331 RRALVKSWFEHLTATAMLLRLSCLHALA----------ELLTCPDHEKTLE--IFNVEDK 378
Query: 404 SSKLTPSG----LFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDAS 458
+ SG F+ L Q ++R A + + L PW + L + + + +
Sbjct: 379 GWDGSSSGEVMRTFMKFLDQPFPDLRHATFHAVQALARHPWGVKALFAYPGFLEFIVNRG 438
Query: 459 TEQQK 463
TE K
Sbjct: 439 TETTK 443
>gi|345777917|ref|XP_531929.3| PREDICTED: LOW QUALITY PROTEIN: 26S proteasome non-ATPase
regulatory subunit 5 [Canis lupus familiaris]
Length = 546
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 163/387 (42%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 130 LQKGLTHPDDSVKILTLSQVGRIVENSD----AVTEILNNGELLKQIVYCIGGDNLSVAK 185
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ K++ G++ +F ++ DL V + + + R RV LIV++ SVS
Sbjct: 186 AAIKSLSKISLTQAGLEALF--ESNLLDDLKR-VMKTNDIVRYRVYELIVEISSVSPESL 242
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 243 TYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 301
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 302 ADSDPFSSFYLPGFVKFFGNLAIMDSPQQICERYPV-----FVEKVFEMTESQDPTMIGV 356
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+I+G +L R ++ + + +L K R D
Sbjct: 357 AVDTVGILGSNIEGKQVLQKTGTRFERLLMKIGYQAKNASTEL-----------KIRCLD 405
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I I E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 406 AISSIFYIPPEQQTEDLLRMTESWFSALSRDPLELFRGISNQPFPELHCAALKVFTAIAN 465
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 466 QPWAQKLMFNSPGFVEYVMDRSVEHDK 492
>gi|410978963|ref|XP_003995856.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 1
[Felis catus]
Length = 504
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 166/387 (42%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT + SVK L V ++E+S+ ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHSNDSVKILTLSQVGRIVENSE----AVTEILNNAELLKQIVYCIGGDNLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDVVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA QH ++LS+ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCVEMVTSLAYTQHGRQYLSQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAIMDSPQQICERYPV-----FVEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ + + +L K R D
Sbjct: 315 AVDTIGILGSNVEGKQVLQKTGTRFERLLMKIGYQAKNASTEL-----------KIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I I E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSIFYIPPEQQTDDLLRMTESWFSSLSRDPLELFRGISNQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|348528001|ref|XP_003451507.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
[Oreochromis niloticus]
Length = 504
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 187/416 (44%), Gaps = 50/416 (12%)
Query: 65 LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLID 124
LERI ++ +Y +Q GLT + +VK LA + ++ED D ++L +
Sbjct: 68 LERILMAMSPVHVVQNYRAELQRGLTHPNDTVKILALAQIGRVVEDPD----AVTEILNN 123
Query: 125 YEIYPLLLDCLINGNEEVATASMDAIKKLAGFPN---GIDIIFPADNKAATDLGNL---V 178
+++ + C+ G E++A A AI+ L+ F + G+D +F TDL + V
Sbjct: 124 HDVLRAAIRCI--GEEKMAVAK-QAIQSLSKFSHSKPGLDKLF------QTDLLQVMKDV 174
Query: 179 AQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYE 238
S + R R+ L+V++ SVS + L++ L ++ +D L ++ +E++
Sbjct: 175 MATSDIIRYRIYELVVEISSVSPISLGYCANSGLISQLLSELT-GDDVLVRVTAVEMVTT 233
Query: 239 LAEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAK 298
LA QH ++L++ ++ + ++I + T+ ++ + G L K ++ I +S +
Sbjct: 234 LAHSQHGRQYLAQQGIMDKISNMIRGAETDPF---SSLYLPG--LVKFFGNLAIMDSPQQ 288
Query: 299 T--VISAIDGRLGFLQSQDSDEC--ESALEALGQIGSSIQGATLLLLCLPPAARHVIDAA 354
A ++ F + D D AL+ LG +GS+++G +L + V+
Sbjct: 289 VCETYPAFQNKV-FEMALDPDPVMIGVALDTLGLLGSNVEGKQVLQKT-GEKFKAVLSKM 346
Query: 355 FDRQGHG------KQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLT 408
G + L A+ L ++ + ++ED + L ES HL+ SS+
Sbjct: 347 SQLASSGPTELRVRSLDAISQLLSLQPEQQTEDLLALT----ESWFHLL------SSQ-- 394
Query: 409 PSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
P + ++ Q E+ R+ T + +PW + + + + D ST Q K
Sbjct: 395 PMDMIRNISTQPFPELHCGALRIFTAIATQPWGQKLMINTPGFMEFILDRSTGQTK 450
>gi|301760438|ref|XP_002916002.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
[Ailuropoda melanoleuca]
gi|281337717|gb|EFB13301.1| hypothetical protein PANDA_004048 [Ailuropoda melanoleuca]
Length = 504
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 163/387 (42%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPDDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQIIYCIGGDNLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKR-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 TYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAIMDSPQQICERYPI-----FVEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ + + +L K R D
Sbjct: 315 AVDTIGILGSNVEGKQVLQKTGTRFERLLMKIGYQAKNASTEL-----------KIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I I E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSIFYISPEQQTDDLLRMTESWFSSLSRDPLELFRGISNQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|344271998|ref|XP_003407823.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5
[Loxodonta africana]
Length = 504
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD A ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPDDSVKILTLSQVGRIVENSDAVA----EILNNSELLKQIIYCIGVENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + S + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTSDVVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ +++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIEQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L + D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAAMDSPQQICERYPV-----FVEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L + R GH + A+ K R D
Sbjct: 315 AVDTIGILGSNVEGKQVL-----QKTGTRFEHLLMRIGHQAKNASTE------LKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
+ +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AVSSLLYLSPEQQTDDLLRMTESWFSSLSRNPLELFRGISNQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + V D S E K
Sbjct: 424 QPWAQKLMFHSPGFVEYVVDRSVEHDK 450
>gi|296190693|ref|XP_002743302.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 1
[Callithrix jacchus]
Length = 504
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 171/389 (43%), Gaps = 36/389 (9%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPDDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDVVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + + + ++ ++SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSP-----QQTCERYPVFMEKVFEMIESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A++ K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLV-----RLGHQAKNASME------LKIRCLD 363
Query: 382 KI--ILNADAEES----LRHLIYEVASRSSKLTPSGLFLSVLQQA-AEIRLAGYRMITGL 434
I +L E+ LR Y +S S P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTEYWFSSLSRD--PLELFRGISSQPFPELHCAALKVFTAI 421
Query: 435 VARPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 422 ANQPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|47215138|emb|CAG12429.1| unnamed protein product [Tetraodon nigroviridis]
Length = 466
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 173/408 (42%), Gaps = 72/408 (17%)
Query: 65 LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLID 124
LERI L+ +Y +Q GL +VK LA + ++E D A ++L +
Sbjct: 68 LERILVALSPVCLVQNYRAELQAGLGHPQDTVKVLALTQIGRIVEHPD----AATEVLNN 123
Query: 125 YEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSL 184
E+ +++C+ VA ++ ++ KL+ G+D +F +D T + +++A S +
Sbjct: 124 REVLQAVINCIREEKIAVAKQAIQSLSKLSHSKPGLDALFQSD--LLTVMKDVMA-TSDI 180
Query: 185 GRVRVLSLIVKLFSVSR----SVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELA 240
R R+ L+V++ S S A+ F + LL G +D L + +E++ LA
Sbjct: 181 VRYRIYELVVEISSASPVSLGYCANSSFISQLL-----GELTGDDVLVRATAIEMVTTLA 235
Query: 241 EIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTV 300
QH ++L++ ++ + ++I + T+ ++ + G L K ++ I +S +
Sbjct: 236 RSQHGRQYLAQQGIMDKIANMIRGAETDPF---SSLYLPG--LVKFFGNLAIMDSPQQVC 290
Query: 301 IS--AIDGRLGFLQSQDSDECES--ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD 356
S A ++ F + D D + AL+ LG +GS+++G +L
Sbjct: 291 ESYPAFQHKV-FEMALDPDPVMNGVALDTLGLLGSTVEGKQVLQ---------------- 333
Query: 357 RQGHGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSV 416
+ ++ED + L ES HL+ + P + ++
Sbjct: 334 -----------------KTEQQTEDLLALT----ESWFHLLSK--------QPMDMIRNI 364
Query: 417 LQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
Q E+ R+ T + A+PW + S + V D ST Q K
Sbjct: 365 SSQPFPELHCGALRIFTAIAAQPWGQKLMVSTPSFMEFVLDRSTGQTK 412
>gi|417411255|gb|JAA52072.1| Putative 26s proteasome regulatory complex subunit psmd5, partial
[Desmodus rotundus]
Length = 505
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 182/433 (42%), Gaps = 39/433 (9%)
Query: 40 PLSVILNTLQTKPDVPGLEDTLVVC-LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKR 98
PL +LN Q + + TL V LER+ + L + +Q GLT SVK
Sbjct: 49 PLFSLLNENQRE------QTTLCVSILERLLQAVEPIHLARNLRVDLQKGLTHPDDSVKI 102
Query: 99 LACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPN 158
L V ++E+SD ++L + E+ ++ C+ N VA A++ ++ +++
Sbjct: 103 LTLSQVGRIVENSD----AVTEILNNPELLKQIVYCIGGENLSVAKAAIKSLSRISLTQA 158
Query: 159 GIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEE 218
G++ +F ++ DL V + + + R RV LI+++ SVS S + L+T L
Sbjct: 159 GLEALF--ESNLLDDLKT-VMKTNDIVRYRVYELILEISSVSPESLSYCTTSGLVTQLLR 215
Query: 219 GVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRA 275
++ + D L + +E++ LA H ++L++ ++ + ++I + ++ +
Sbjct: 216 ELTGE-DVLVRATCVEMVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGF 274
Query: 276 IMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQG 335
+ G L D + A ++ +SQD A++ +G +GS+++G
Sbjct: 275 VKFFGNLAIMDSPQQICERYPA-----FVEKVFEMTESQDPTMIGVAVDTIGILGSNVEG 329
Query: 336 ATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESL 393
+L R + + + +L K R D I +L E+
Sbjct: 330 KQVLQKTGTRFERLLTRIGYQAKNASTEL-----------KIRCLDAISSLLYLPPEQQT 378
Query: 394 RHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEI 450
L+ S S L P LF + Q E+ A +++T + +PW + +
Sbjct: 379 DDLLRMTESWFSSLARDPLELFRGMSNQPFPELHCAALKVLTAIANQPWAQKLMFNSPGF 438
Query: 451 INTVTDASTEQQK 463
+ V D S E K
Sbjct: 439 VEYVMDRSVEHDK 451
>gi|355714090|gb|AES04889.1| proteasome 26S subunit, non-ATPase, 5 [Mustela putorius furo]
Length = 499
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 163/387 (42%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT + SVK L V ++E+S+ ++L + E+ ++ C+ N VA
Sbjct: 84 LQRGLTHPNDSVKILTLSQVGRIVENSE----AVTEILNNAELLKQIVYCIGGDNLSVAK 139
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ D V + + + R RV LIV++ SVS
Sbjct: 140 AAIKSLSRISLTQAGLEALFESN---LLDDVKRVMKTNDVVRYRVYELIVEISSVSTESL 196
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 197 TYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 255
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 256 ADSDPFSSFYLPGFVKFFGNLAIMDSPQQICERYPI-----FVEKVFEMTESQDPTMIGV 310
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ + + +L K R D
Sbjct: 311 AVDTIGILGSNVEGKQVLQKTGTRFERLLMKIGYQAKNASTEL-----------KIRCLD 359
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I I E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 360 AISSIFYIPPEQQTDDLLRMTESWFSSLSRDPLELFRGISNQPFPELHCAALKVFTAIAN 419
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 420 QPWAQKLMFNSPGFVEYVMDRSVEHDK 446
>gi|332229876|ref|XP_003264113.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 1
[Nomascus leucogenys]
Length = 504
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIIENSD----AVTEILNNAELLRQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ ++SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMIESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RVGHQSKNAP------VELKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|66773843|sp|Q5IFJ8.3|PSMD5_MACFA RecName: Full=26S proteasome non-ATPase regulatory subunit 5;
AltName: Full=26S protease subunit S5 basic; AltName:
Full=26S proteasome subunit S5B
gi|57639314|gb|AAW55577.1| PSMD5 [Macaca fascicularis]
Length = 504
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMTESQDPTMTGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSALSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S EQ K
Sbjct: 424 QPWAQKLMFNIPGFVEYVVDRSVEQDK 450
>gi|395824087|ref|XP_003785303.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 1
[Otolemur garnettii]
Length = 504
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 166/387 (42%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPDDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQVVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ + + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAHTHHGRQYLAQEGVTDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + + + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSP-----QQTCERYPVFVEKVFEMAESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L + R GH + A+ K R D
Sbjct: 315 AVDTVGILGSNVEGKQVL-----QKTGTRFERLLTRIGHQAKNASTE------LKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISNQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|410332101|gb|JAA34997.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Pan
troglodytes]
Length = 510
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 94 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILSNAELLKQIVYCIGGENLSVAK 149
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LI+++ SVS
Sbjct: 150 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIIEISSVSPESL 206
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 207 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 265
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ ++SQD
Sbjct: 266 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMIESQDPTMIGV 320
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 321 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 369
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 370 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTAIAN 429
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 430 QPWAQKLMFNSPGFVEYVVDRSVEHDK 456
>gi|505106|dbj|BAA06687.1| KIAA0072 [Homo sapiens]
Length = 503
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 87 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 142
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LI+++ SVS
Sbjct: 143 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIIEISSVSPESL 199
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 200 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 258
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ ++SQD
Sbjct: 259 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMIESQDPTMIGV 313
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 314 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 362
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 363 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTAIAN 422
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 423 QPWAQKLMFNSPGFVEYVVDRSVEHDK 449
>gi|410208524|gb|JAA01481.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Pan
troglodytes]
Length = 504
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILSNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LI+++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIIEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ ++SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMIESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|449269086|gb|EMC79895.1| 26S proteasome non-ATPase regulatory subunit 5, partial [Columba
livia]
Length = 447
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 173/412 (41%), Gaps = 36/412 (8%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ +I + +Q GL SVK L+ V ++E+S ++
Sbjct: 8 VSILERLLPALDPLYVIQNLREELQKGLFHPDDSVKILSISQVGRIVENS----GAVTEI 63
Query: 122 LIDYEIYPLLLDCLINGNEEVATA--SMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA 179
L E+ +++C+ G E++A A ++ ++ +LA +G++ +F + +DL N++A
Sbjct: 64 LNSPELLRQIINCI--GGEKIAVAKEAIKSLSRLAQTQDGLEALFVSS--LLSDLKNVMA 119
Query: 180 QCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYEL 239
S + R RV LIV++ SVS + + L++ L G +D L + +E++ L
Sbjct: 120 -TSDVVRYRVYELIVEISSVSAESLNYCANSGLISEL-IGELTGDDVLVRATCIEMVTSL 177
Query: 240 AEIQHSAEFLSRTTLLQLLCSLIGNSATET---ILRSRAIMISGRLLSKDDSHMFIDESS 296
A H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 178 AHTPHGRQYLAQQGIIDKISNIILGAESDPFSGFYLPGFVKFFGNLAVVDSPQQICERYP 237
Query: 297 AKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD 356
++ +S D A++ LG +GS+++G +L AR +
Sbjct: 238 V-----FMEKVFEMAESHDPTMIGVAVDTLGVLGSTVEGKQVL-----QKARSRFQNLLN 287
Query: 357 RQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGL 412
R GH + A + R D I +L E+ L+ S + L+ P L
Sbjct: 288 RIGHQAKNAPTE------LRLRCLDAISALLYLPPEQQTDDLLRMTESWFASLSNQPLEL 341
Query: 413 FLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
F S+ Q ++ R+ T + +PW + + + D S E K
Sbjct: 342 FRSISTQPFPDLHCGALRVFTAIANQPWAQKLMLDSPGFVEYIVDRSVEPDK 393
>gi|158255538|dbj|BAF83740.1| unnamed protein product [Homo sapiens]
Length = 504
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LI+++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIIEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ ++SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMIESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|4826952|ref|NP_005038.1| 26S proteasome non-ATPase regulatory subunit 5 isoform 1 [Homo
sapiens]
gi|397526461|ref|XP_003833142.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 1
[Pan paniscus]
gi|3122657|sp|Q16401.3|PSMD5_HUMAN RecName: Full=26S proteasome non-ATPase regulatory subunit 5;
AltName: Full=26S protease subunit S5 basic; AltName:
Full=26S proteasome subunit S5B
gi|1184533|gb|AAB35397.1| 26 S protease subunit 5b [Homo sapiens]
gi|15680247|gb|AAH14478.1| Proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Homo
sapiens]
gi|119607877|gb|EAW87471.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Homo
sapiens]
gi|123982540|gb|ABM83011.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
[synthetic construct]
gi|123997207|gb|ABM86205.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
[synthetic construct]
gi|208967158|dbj|BAG73593.1| proteasome (prosome, macropain) 26S subunit, non-ATPase 5
[synthetic construct]
Length = 504
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LI+++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIIEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ ++SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMIESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|114626391|ref|XP_520224.2| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 2
[Pan troglodytes]
Length = 504
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 167/387 (43%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LI+++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIIEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ ++SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMIESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|426362879|ref|XP_004048579.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 1
[Gorilla gorilla gorilla]
Length = 504
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 175/410 (42%), Gaps = 32/410 (7%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + + + +Q GL SVK L + ++E+SD ++
Sbjct: 65 VSILERLLQAMEPVHVAQNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL + V +
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKT 177
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAE 241
+ + R RV LI+++ SVS + + L+T L ++ + D L + +E++ LA
Sbjct: 178 NDIVRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAY 236
Query: 242 IQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFIDESSAK 298
H ++L++ ++ + ++I + ++ + + G L D +
Sbjct: 237 THHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI- 295
Query: 299 TVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQ 358
++ ++SQD A++ +G +GS+++G +L R ++ R
Sbjct: 296 ----FVEKVFEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RI 346
Query: 359 GHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFL 414
GH + A + K R D + +L E+ L+ S S L+ P LF
Sbjct: 347 GHQSKNAP------VELKIRCLDAVSSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFR 400
Query: 415 SVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 401 GISSQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|355567479|gb|EHH23820.1| 26S proteasome subunit S5B [Macaca mulatta]
gi|383414591|gb|AFH30509.1| 26S proteasome non-ATPase regulatory subunit 5 [Macaca mulatta]
Length = 504
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 166/387 (42%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMTESQDPTMTGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSALSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|355753067|gb|EHH57113.1| 26S proteasome subunit S5B [Macaca fascicularis]
gi|380814904|gb|AFE79326.1| 26S proteasome non-ATPase regulatory subunit 5 [Macaca mulatta]
gi|384942084|gb|AFI34647.1| 26S proteasome non-ATPase regulatory subunit 5 [Macaca mulatta]
Length = 504
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 166/387 (42%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMTESQDPTMTGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A + K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RIGHQSKNAP------VELKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSALSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|291408454|ref|XP_002720549.1| PREDICTED: proteasome 26S non-ATPase subunit 5 [Oryctolagus
cuniculus]
Length = 504
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 166/391 (42%), Gaps = 40/391 (10%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD ++L + ++ ++ C+ N VA
Sbjct: 88 LQKGLTHPDDSVKILTLSQVGRIVENSD----AVTEILNNAKLLKEIVYCISGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLETLF--ESSLLDDLKS-VMKTNDVVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLITQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQVSNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPV-----FVEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD----RQGHGKQLAALHGLANIAGKT 377
A++ +G +GS+I+G +L H F+ R GH + A+ K
Sbjct: 315 AVDTIGILGSNIEGKQVL---------HKTGTRFEHLLKRIGHQAKNASTE------LKL 359
Query: 378 RSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMIT 432
R D I IL E+ L+ S S L+ P LF + Q E+ A ++ T
Sbjct: 360 RCLDAISSILYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFT 419
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ + W + + + V D S E K
Sbjct: 420 AIANQSWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|431900771|gb|ELK08212.1| 26S proteasome non-ATPase regulatory subunit 5 [Pteropus alecto]
Length = 504
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 165/391 (42%), Gaps = 40/391 (10%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+S+ ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPDDSVKILTLSQVGRIVENSN----AVTEILNNPELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL V + + + R RV LIV++ S S
Sbjct: 144 AAIKSLSRISLTQTGLEALF--ESNLLDDLKT-VMKTNDIVRYRVYELIVEVSSTSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTTLAHTHHGRQYLAQEGIIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAIMDSPQQICERYPV-----FVEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD----RQGHGKQLAALHGLANIAGKT 377
A++ LG +GS+++G +L H F+ R G+ + A+ K
Sbjct: 315 AVDTLGILGSNVEGKQVL---------HKTGTRFEHLLMRIGYQAKNASTE------LKI 359
Query: 378 RSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMIT 432
R D I +L E+ L+ S S L+ P LF + Q E+ A ++ T
Sbjct: 360 RCLDAISSLLYLPPEQQTDDLLRMTDSWFSSLSRDPLELFRGISNQPFPELHCAALKVFT 419
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ +PW + + + + D S E K
Sbjct: 420 AIANQPWAQKLMFNSPGFVEYIMDRSVEHDK 450
>gi|328769374|gb|EGF79418.1| hypothetical protein BATDEDRAFT_89502 [Batrachochytrium
dendrobatidis JAM81]
Length = 517
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 150/345 (43%), Gaps = 38/345 (11%)
Query: 119 LQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLV 178
L+LL++ I+ L++ C+ N +VA + +K+L P ++ + DN + D L
Sbjct: 132 LRLLVESNIFTLVIQCIAFENSQVAEMASSFLKQLGRHPFALEALLSPDNISTMD--RLS 189
Query: 179 AQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYE 238
++ ++ ++R+ L+V + S+S + L+ L GV +ND LE+++++E+L
Sbjct: 190 SESITV-KLRIYDLLVNISMSSQSAFDYCAQQGALSSL-TGVIFQNDLLESINVIEILTS 247
Query: 239 LAEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSR-----AIMISGRLLSKDDSHMFID 293
E + FL + ++ L + S + SR I G L+ + H + +
Sbjct: 248 FTETPNGYFFLEKAGVISQLFDALQISPNVDDIVSRLTTCATIKFWGMLIF--NQHQYAE 305
Query: 294 ESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDA 353
+ +T + FL+ DSD ++ A+ GS +G T+L +D
Sbjct: 306 --AIQTRFDILGALQPFLEESDSDIKDAIFVAVANFGSREEGLTILY-----QQSIFLDT 358
Query: 354 --AFDRQGHG-KQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPS 410
A R G +L+ L + + G ++ D E + I+E KL
Sbjct: 359 IIAMCRSSTGDAKLSLLRTYSCLLGVGS------IDNDQTERMTLHIFE------KLETH 406
Query: 411 GLFLSVLQQAA-----EIRLAGYRMITGLVARPWCLMELCSKQEI 450
GL + L Q E+ +A Y ++ G+++ W + +L E
Sbjct: 407 GLSIKQLMQLTKGTIEELSVAAYAVLNGVLSHTWGIEKLAHSSEF 451
>gi|307106562|gb|EFN54807.1| hypothetical protein CHLNCDRAFT_134792, partial [Chlorella
variabilis]
Length = 210
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 27 QNDAAAKKFLDRFPLSVILNTLQTKPDVPG--LEDTLVVCLERIFKTKYGASLIPHYMPF 84
Q+DA A+ F+ FPL L + PDV +ED L ++F T YGASL+P +P
Sbjct: 19 QSDAEAQDFIAAFPLETCFREL-SGPDVSASLMEDA-AAALAKVFGTSYGASLLPSILPL 76
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLI 123
L + S ++RLA + + L+ + L LL+
Sbjct: 77 AAAALQSPSVPLRRLAVQQLGRLVAAQEEPPPACLDLLM 115
>gi|444716581|gb|ELW57425.1| 26S proteasome non-ATPase regulatory subunit 5 [Tupaia chinensis]
Length = 536
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 170/410 (41%), Gaps = 35/410 (8%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + + + +Q GLT SVK L V ++E+SD ++
Sbjct: 100 VSILERLLQALEPVHVARNLRADLQRGLTHPDDSVKILTLSQVGRIVENSD----AVTEI 155
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL N V +
Sbjct: 156 LNNCELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKT 212
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAE 241
+ + R RV LIV++ SVS + + L+T L ++ ++ L +L LA
Sbjct: 213 NDIVRYRVYELIVEISSVSPESLNYCTTSGLVTQLLRELTGED----VLVSHRVLTSLAY 268
Query: 242 IQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFIDESSAK 298
H ++L++ ++ + ++I + ++ + + G L D +
Sbjct: 269 THHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAIMDSPQQICERYPV- 327
Query: 299 TVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQ 358
++ +SQD A++ +G +GSS++G +L + R
Sbjct: 328 ----FVEKVFEMAESQDPTMIGVAVDTIGILGSSVEGKQVL-----QKTGTRFERLLTRI 378
Query: 359 GHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFL 414
GH + A+ K R D + +L E+ L+ S S L+ P LF
Sbjct: 379 GHQAKNASTE------LKIRCLDAVSALLLLPPEQQTDDLLRMTESWFSSLSRDPLELFR 432
Query: 415 SVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 433 GISNQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVMDRSVEHDK 482
>gi|348586259|ref|XP_003478886.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
[Cavia porcellus]
Length = 504
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 162/391 (41%), Gaps = 40/391 (10%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD ++L + E+ ++ C+ VA
Sbjct: 88 LQRGLTHPDDSVKILTLSQVERIVENSD----AVTEILNNAELLKQIVYCIGGEKLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ K++ G++ +F ++ DL N V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSKMSLTQAGLEALF--ESNLLDDLKN-VMKTNDVVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 QYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTPHGRQYLAQEGIIDQISNIIVG 259
Query: 265 SATETILR---SRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + G L D + ++ +SQD
Sbjct: 260 ADSDPFFSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD----RQGHGKQLAALHGLANIAGKT 377
A++ +G +GS+++G +L H F+ R GH + A+ K
Sbjct: 315 AVDTIGILGSNVEGKQVL---------HKTGTRFEGLLMRIGHQAKNASTE------LKI 359
Query: 378 RSEDKI--ILNADAEESLRHLIYEVASRSSKLTPSG--LFLSVLQQA-AEIRLAGYRMIT 432
R D I +L E+ L+ S S L+ LF + Q E+ A ++ T
Sbjct: 360 RCLDAIASLLYLPPEQQTDDLLRMTESWFSSLSRDSLELFRGISNQPFPELHCAALKVFT 419
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ + W + + + V D S E K
Sbjct: 420 AIADQRWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|296484327|tpg|DAA26442.1| TPA: 26S proteasome non-ATPase regulatory subunit 5 [Bos taurus]
Length = 504
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 165/388 (42%), Gaps = 34/388 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT + SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPNDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 TAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NCCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLACTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ + + + G L D + ++ +SQD
Sbjct: 260 ADADPFSSFYLPGFVKFFGNLAIMDSPQQICERYPI-----FMEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLA-----ALHGLANIAGK 376
A++ +G +GS+++G +L R ++ + + +L AL L + +
Sbjct: 315 AVDTIGILGSNVEGKQVLQKTGTRFERLLMKIGYQAKNASTELKIRCLDALSSLFYLPPE 374
Query: 377 TRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA-AEIRLAGYRMITGLV 435
+++D + + SL SR P LF + Q E+ A ++ T +
Sbjct: 375 QQTDDLLRMTESWFSSL--------SRD----PLELFRGISNQPFPELHCAALKVFTAIA 422
Query: 436 ARPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 423 NQPWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|297270270|ref|XP_002800045.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
[Macaca mulatta]
Length = 497
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 166/389 (42%), Gaps = 43/389 (11%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GL SVK L + ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + ++ +SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI-----FVEKVFEMTESQDPTMTGV 314
Query: 322 ALEALGQIGSSIQGATLLL------LCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAG 375
A++ +G +GS+++G +L L L R ++ FDR G ++ N
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGWYDLAL---FRDIL--IFDR---GSMCKFIYWWVNYIP 366
Query: 376 KTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA-AEIRLAGYRMITGL 434
+ +++D + + +L SR P LF + Q E+ A ++ T +
Sbjct: 367 EQQTDDLLRMTESWFSAL--------SRD----PLELFRGISSQPFPELHCAALKVFTAI 414
Query: 435 VARPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 415 ANQPWAQKLMFNSPGFVEYVVDRSVEHDK 443
>gi|426219621|ref|XP_004004017.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 1
[Ovis aries]
Length = 504
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 164/388 (42%), Gaps = 34/388 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT + SVK L V ++E+ D ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPNESVKILTLSQVGRIVENPD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
++ ++ K++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 TAIKSLSKISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLACTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ + + + G L D + ++ +SQD
Sbjct: 260 ADADPFSSFYLPGFVKFFGNLAIMDSPQQICERYPI-----FVEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLA-----ALHGLANIAGK 376
A++ +G +GS+++G +L R ++ + + +L AL L + +
Sbjct: 315 AVDTIGILGSNVEGKQVLQKTGTRFERLLMKIGYQAKNATTELKIRCLDALSSLFYLPPE 374
Query: 377 TRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA-AEIRLAGYRMITGLV 435
+++D + + SL SR P LF + Q E+ A ++ T +
Sbjct: 375 QQTDDLLRMAESWFSSL--------SRD----PLELFRGISNQPFPELHCAALKVFTAIA 422
Query: 436 ARPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 423 NQPWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|115496734|ref|NP_001069161.1| 26S proteasome non-ATPase regulatory subunit 5 [Bos taurus]
gi|122143228|sp|Q0P5A6.1|PSMD5_BOVIN RecName: Full=26S proteasome non-ATPase regulatory subunit 5
gi|112362403|gb|AAI20301.1| Proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Bos
taurus]
Length = 503
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 161/393 (40%), Gaps = 45/393 (11%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT + SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPNDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 TAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NCCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLACTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ + + + G L D + ++ +SQD
Sbjct: 260 ADADPFSSFYLPGFVKFFGNLAIMDSPQQICERYPI-----FMEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L Q G + L K S +
Sbjct: 315 AVDTIGILGSNVEGKQVL------------------QKTGTRFERLLMKIGYQAKNASTE 356
Query: 382 KIILNADAEESLRHLIYEVASRSSKLT----------PSGLFLSVLQQA-AEIRLAGYRM 430
I DA SL +L E ++T P LF + Q E+ A ++
Sbjct: 357 LKIRCLDALSSLFYLPPEQTDDLLRMTESWFSSLSRDPLELFRGISNQPFPELHCAALKV 416
Query: 431 ITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
T + +PW + + + V D S E K
Sbjct: 417 FTAIANQPWAQKLMFNSPGFVEYVMDRSVEHDK 449
>gi|440911192|gb|ELR60898.1| 26S proteasome non-ATPase regulatory subunit 5 [Bos grunniens
mutus]
Length = 504
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 165/388 (42%), Gaps = 34/388 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT + SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPNDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 TAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSPESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NCCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLACTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ + + + G L D + ++ +SQD
Sbjct: 260 ADADPFSSFYLPGFVKFFGNLAIMDSPQQICERYPI-----FMEKVFEMTESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLA-----ALHGLANIAGK 376
A++ +G +GS+++G +L R ++ + + +L AL L + +
Sbjct: 315 AVDTIGILGSNVEGKQVLQKTGTRFERLLMKIGYQAKNASTELKIRCLDALSTLFYLPPE 374
Query: 377 TRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA-AEIRLAGYRMITGLV 435
+++D + + SL SR P LF + Q E+ A ++ T +
Sbjct: 375 QQTDDLLRMTESWFSSL--------SRD----PLELFRGISNQPFPELHCAALKVFTAIA 422
Query: 436 ARPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 423 NQPWAQKLMFNSPGFVEYVMDRSVEHDK 450
>gi|348041394|ref|NP_001100039.2| 26S proteasome non-ATPase regulatory subunit 5 [Rattus norvegicus]
gi|149038941|gb|EDL93161.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 504
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 164/417 (39%), Gaps = 46/417 (11%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + L + +Q GLT SVK L + ++EDS+ ++
Sbjct: 65 VSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVEDSE----AVTEV 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL N V +
Sbjct: 121 LSNAELLRQVVCCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKT 177
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAE 241
+ + R RV LI+ + SVS + + L+T L ++ + D L + +E++ LA
Sbjct: 178 NDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAY 236
Query: 242 IQHSAEFLSRTTLLQLLCSLIGNSATET---ILRSRAIMISGRLLSKDDSHMFIDESSAK 298
H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 237 THHGRQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPV- 295
Query: 299 TVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQ 358
++ SQD A++ +G +GSS++G +L Q
Sbjct: 296 ----FLEKVFAMADSQDPTMIGVAVDTVGILGSSVEGKQVL------------------Q 333
Query: 359 GHGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVL- 417
G + L K S + I DA SL +L E + F SV
Sbjct: 334 KTGTRFERLLTRIGYQAKNASTELKIRCLDAVSSLLYLSPEQQTDDFLGMTESWFSSVSR 393
Query: 418 -----------QQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 394 DSLELFRGISNQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEFVMDRSVEHDK 450
>gi|326923375|ref|XP_003207912.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
[Meleagris gallopavo]
Length = 597
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 175/412 (42%), Gaps = 36/412 (8%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + +I + ++ GL SVK L+ V ++E+SD ++
Sbjct: 158 VAVLERLLQALDPLYVIQNLREELRKGLFHPDDSVKILSISQVGRIVENSD----AVREI 213
Query: 122 LIDYEIYPLLLDCLINGNEEVATA--SMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA 179
L E+ +++C+ G E++A A ++ ++ ++A +G++ +F + +DL N++A
Sbjct: 214 LNSPELLRQIINCI--GGEKIAVAKEAIKSLSRIAQTQDGLEALFVSS--LLSDLKNVMA 269
Query: 180 QCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYEL 239
+ + R RV LIV++ SVS + + L++ L G +D L + +E++ L
Sbjct: 270 -TNDVVRYRVYELIVEISSVSADSLNYCANSGLISDLI-GELTGDDVLVRATCIEMVTSL 327
Query: 240 AEIQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDESS 296
A H ++L++ ++ + ++I + ++ I G L D +
Sbjct: 328 AHTAHGRQYLAQQGVIDKISNIIIGAESDPFSGFYLPGFIKFFGNLAVVDSPQQICERYP 387
Query: 297 AKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD 356
++ +S D A++ LG +GSS++G +L AR +
Sbjct: 388 V-----FMEKVFEMAESHDPTMIGVAVDTLGILGSSVEGKQVL-----QKARSRFQNLLN 437
Query: 357 RQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGL 412
+ GH + A + R D + +L E+ L+ S + L+ P L
Sbjct: 438 KIGHQAKNAPTE------LRLRCLDAVSSLLYLPPEQQTEDLLRMTESWFTSLSSQPLEL 491
Query: 413 FLSV-LQQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
F S+ Q ++ R+ T + + W + + + + D S E K
Sbjct: 492 FRSISTQPFPDLHCGALRVFTAIANQAWAQKLMLNSPGFVEYIVDRSVEPDK 543
>gi|134053913|ref|NP_542121.2| 26S proteasome non-ATPase regulatory subunit 5 [Mus musculus]
gi|52783230|sp|Q8BJY1.4|PSMD5_MOUSE RecName: Full=26S proteasome non-ATPase regulatory subunit 5;
AltName: Full=26S protease subunit S5 basic; AltName:
Full=26S proteasome subunit S5B
gi|26328757|dbj|BAC28117.1| unnamed protein product [Mus musculus]
gi|74201679|dbj|BAE28457.1| unnamed protein product [Mus musculus]
gi|74211603|dbj|BAE26526.1| unnamed protein product [Mus musculus]
gi|148676683|gb|EDL08630.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5, isoform
CRA_d [Mus musculus]
Length = 504
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 174/413 (42%), Gaps = 38/413 (9%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + L + +Q GLT SVK L + ++E+S+ ++
Sbjct: 65 VSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSE----AVTEI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL N V +
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKT 177
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAE 241
+ + R RV LI+ + SVS + + L+T L + ++ + D L + +E++ LA
Sbjct: 178 NDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGE-DVLVRATCIEMVTSLAY 236
Query: 242 IQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDESSA- 297
H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 237 THHGRQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVF 296
Query: 298 -KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD 356
+ V D SQD A++ +G +GSS++G +L R ++ +
Sbjct: 297 LEKVFEMAD-------SQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQ 349
Query: 357 RQGHGKQLA-----ALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSG 411
+ +L A+ L ++ + +++D + + S+ SR S
Sbjct: 350 AKNASTELKIRCLDAVSSLLYLSPEQQTDDFLGMTESWFSSM--------SRDSL----E 397
Query: 412 LFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
LF + Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 398 LFRGISNQPFPELHCAALKVFTAIADQPWAQRLMFNSPGFVEFVMDRSVEHDK 450
>gi|449478310|ref|XP_002187706.2| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5
[Taeniopygia guttata]
Length = 504
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 169/414 (40%), Gaps = 40/414 (9%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + +I + +Q GL SVK L V ++EDS + ++
Sbjct: 65 VSILERLLQALDPLYMIQNLREELQKGLFHPDDSVKILTMSQVGRIVEDS----AAVPEI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATA--SMDAIKKLAGFPNGIDIIFPADNKAATDLGNL-- 177
L E+ ++ C+ G E++A A ++ ++ ++A G++ +F ++ LG+L
Sbjct: 121 LHSPELLQQIIKCI--GGEKIAVAKEAIKSLSRIAQSQEGLEALF-----GSSLLGDLRR 173
Query: 178 VAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLY 237
V S + R RV LIV++ SVS + + L+ L G D L + +E+L
Sbjct: 174 VMATSDVVRYRVYELIVEISSVSAESLNYCANSGLIPELI-GELTGEDVLVRATCIEMLT 232
Query: 238 ELAEIQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFIDE 294
LA ++L++ ++ + ++I + ++ + + G L D +
Sbjct: 233 SLAHSPQGRQYLAQQGVIDRISNIILGAESDPFSSFYLPGFVKFFGNLAVVDSPQQICER 292
Query: 295 SSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAA 354
++ +SQD A++ LG +GS+++G +L R
Sbjct: 293 YPV-----FMEKVFEMAESQDPTMIGVAVDTLGILGSNVEGKQVL-----QKTRSRFQNL 342
Query: 355 FDRQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PS 410
+ GH + A + R D I +L E+ L+ S + L+ P
Sbjct: 343 LSKIGHQAKNAPTE------LRLRCLDAISSLLYLPPEQQTEDLLRMTESWFTSLSSQPL 396
Query: 411 GLFLSV-LQQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
LF S+ Q ++ R+ T + +PW + S + V D S E K
Sbjct: 397 ELFRSISTQPFPDLHCGALRVFTAIANQPWAQKLMLSSPGFVEYVVDRSVEPDK 450
>gi|432885027|ref|XP_004074621.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
isoform 1 [Oryzias latipes]
Length = 504
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 179/419 (42%), Gaps = 50/419 (11%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V L+RI L+ +Y +Q GLT + +VK LA + +++ D A ++
Sbjct: 65 VEILDRILMALSPLYLVQNYRTELQGGLTHPNETVKILALTQIGRMVDHPD----AATEI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + +I ++ C+ VA ++ ++ KL+ G+D +F ++L ++ Q
Sbjct: 121 LNNEDILKAVILCIGEEKMSVAKQAIKSLSKLSYSKPGLDKLF------HSELLKVIKQV 174
Query: 182 ---SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYE 238
S + R RV L+V++ S S L++LL ++ +D L + +E++
Sbjct: 175 MGTSDIIRYRVYELLVEISSASPISLGYCANTGLISLLLSELT-GDDVLIRATAIEMVTS 233
Query: 239 LAEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAK 298
LA QH ++L++ ++ + ++I + T+ ++ + G L K ++ I +S +
Sbjct: 234 LAHSQHGRQYLAQQGIMDKISNMIRGAETDPF---SSLYLPG--LVKFFGNLAIMDSPQQ 288
Query: 299 TVIS-AIDGRLGFLQSQDSDEC--ESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAF 355
S + F + D+D AL+ LG +GS+++G +L + A
Sbjct: 289 VCESYPVFQSKVFEMALDTDPAMIGVALDTLGLLGSTVEGKQVL-----QKTGENVKAVL 343
Query: 356 DRQGH----------GKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSS 405
R + L AL L + + ++ED + L ES L+ +
Sbjct: 344 LRMSQLASSGATDLRVRSLDALSQLLTLMPEQQTEDLLALT----ESWFLLLSK------ 393
Query: 406 KLTPSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
P + S+ Q E+ A R+ T + +PW + S + + D ST Q K
Sbjct: 394 --EPMEMIRSISTQPFPELHCAALRIFTAIATQPWGQRLMMSTPGFMEFLLDRSTGQTK 450
>gi|62857886|ref|NP_001015983.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Xenopus
(Silurana) tropicalis]
gi|170284974|gb|AAI61160.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Xenopus
(Silurana) tropicalis]
Length = 505
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 130/285 (45%), Gaps = 24/285 (8%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCAL-Q 120
VV LER + + +Y +Q GL SVK LA V + +E S AL +
Sbjct: 66 VVILERFLQALEPVDIARNYKEELQRGLYHPDDSVKILAITQVGRI-----VECSAALAE 120
Query: 121 LLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQ 180
+ + E+ ++ + VA ++ +I K+A +G+D++F ++ T+L N++A
Sbjct: 121 IFNNLELLKQIILSIGGDKLSVAKEAIKSISKIAQTTSGLDVLFSSN--LLTELKNVMA- 177
Query: 181 CSSLGRVRVLSLIVKLFSVS-RSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYEL 239
S + R RV L+V++ SVS S+ + + LLEE +D L ++ E++ L
Sbjct: 178 ISDIVRYRVYELVVEISSVSAESLGYCVTSGLVPQLLEELTG--DDVLIRVTCTEMVTSL 235
Query: 240 AEIQHSAEFLSRTTLLQLLCSLIGNSATET---ILRSRAIMISGRLLSKDDSHMFIDESS 296
A H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 236 ATTLHGRQYLAQQGIIDKISNMILGADSDPFSGFYLPGLVKFFGNLAVVDSPQQICEHYP 295
Query: 297 A--KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLL 339
A + V +G QD A++ LG +GS+++G +L
Sbjct: 296 AFLQKVFDMAEG-------QDVTMLGVAVDTLGILGSNLEGKQVL 333
>gi|60360298|dbj|BAD90393.1| mKIAA0072 protein [Mus musculus]
Length = 497
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 174/413 (42%), Gaps = 38/413 (9%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + L + +Q GLT SVK L + ++E+S+ ++
Sbjct: 58 VSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSE----AVTEI 113
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL N V +
Sbjct: 114 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKT 170
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAE 241
+ + R RV LI+ + SVS + + L+T L + ++ + D L + +E++ LA
Sbjct: 171 NDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGE-DVLVRATCIEMVTSLAY 229
Query: 242 IQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDESSA- 297
H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 230 THHGRQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVF 289
Query: 298 -KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD 356
+ V D SQD A++ +G +GSS++G +L R ++ +
Sbjct: 290 LEKVFEMAD-------SQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQ 342
Query: 357 RQGHGKQLA-----ALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSG 411
+ +L A+ L ++ + +++D + + S+ SR S
Sbjct: 343 AKNASTELKIRCLDAVSSLLYLSPEQQTDDFLGMTESWFSSM--------SRDSL----E 390
Query: 412 LFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
LF + Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 391 LFRGISNQPFPELHCAALKVFTAIADQPWAQRLMFNSPGFVEFVMDRSVELDK 443
>gi|354506677|ref|XP_003515386.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5
[Cricetulus griseus]
Length = 504
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 163/389 (41%), Gaps = 36/389 (9%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L + ++E+S+ ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPDDSVKTLTLSQIGRIVENSE----AVTEILNNTELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL N V + + + R RV LI+++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKTNDIVRYRVYELIIEISSVSLESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATETI---LRSRAIMISGRLLSKDDSHMFIDESSA--KTVISAIDGRLGFLQSQDSDEC 319
+ ++ + G L D + + V D SQD
Sbjct: 260 ADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVFLEKVFEMAD-------SQDPTMI 312
Query: 320 ESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRS 379
A++ +G +GSS++G +L + R G+ + A+ KTR
Sbjct: 313 GVAVDTVGILGSSVEGKQVL-----QKTGTRFEHLLTRIGYQAKNASTE------LKTRC 361
Query: 380 EDKI--ILNADAEESLRHLIYEVASRSSKLTPSG--LFLSVLQQA-AEIRLAGYRMITGL 434
D + +L E+ + S + L+ LF + Q E+ A ++ T +
Sbjct: 362 LDAVSSLLYLSPEQQTDDFLRMAESWFASLSQDSLELFRGISNQPFPELHCAALKVFTAI 421
Query: 435 VARPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 422 ANQPWAQKLMFNSPGFVEFVMDRSVEHDK 450
>gi|403266091|ref|XP_003925230.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5 isoform 1
[Saimiri boliviensis boliviensis]
Length = 504
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 171/387 (44%), Gaps = 32/387 (8%)
Query: 85 VQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVAT 144
+Q GLT SVK L V ++E+SD ++L + E+ ++ C+ N VA
Sbjct: 88 LQRGLTHPDDSVKILTLSQVGRIVENSD----AVTEILNNAELLKQIVYCIGGENLSVAK 143
Query: 145 ASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVA 204
A++ ++ +++ G++ +F ++ DL + V + + + R RV LIV++ SVS
Sbjct: 144 AAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKTNDIVRYRVYELIVEISSVSSESL 200
Query: 205 SVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGN 264
+ + L+T L ++ + D L + +E++ LA H ++L++ ++ + ++I
Sbjct: 201 NYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVG 259
Query: 265 SATE---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECES 321
+ ++ + + G L D + + + ++ ++SQD
Sbjct: 260 ADSDPFSSFYLPGFVKFFGNLAVMDSP-----QQTCERYPVFMEKVFEMIESQDPTMIGV 314
Query: 322 ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSED 381
A++ +G +GS+++G +L R ++ R GH + A++ K R D
Sbjct: 315 AVDTVGILGSNVEGKQVLQKTGTRFERLLV-----RLGHQAKNASME------LKIRCLD 363
Query: 382 KI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVA 436
I +L E+ L+ S S L+ P LF + Q E+ A ++ T +
Sbjct: 364 AISSLLYLPPEQQTDDLLRMTESWFSSLSRDPLELFRGISSQPFPELHCAALKVFTAIAN 423
Query: 437 RPWCLMELCSKQEIINTVTDASTEQQK 463
+PW + + + V D S E K
Sbjct: 424 QPWAQKLMFNSPGFVEYVVDRSVEHDK 450
>gi|349602856|gb|AEP98864.1| 26S proteasome non-ATPase regulatory subunit 5-like protein,
partial [Equus caballus]
Length = 390
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 150/352 (42%), Gaps = 28/352 (7%)
Query: 120 QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA 179
++L + E+ ++ C+ N VA A++ ++ +++ ++ +F ++ DL N V
Sbjct: 5 EILNNAELLKQVVYCIGGENLSVAKAAIKSLSRISLTQADLEALF--ESNLLDDLKN-VM 61
Query: 180 QCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYEL 239
+ + + R RV LIV++ SVS + + L+T L ++ + D L + +E + L
Sbjct: 62 KTNDIVRYRVYELIVEISSVSPESLNYCATSGLVTQLLRELTGE-DVLVRATCIETVTSL 120
Query: 240 AEIQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFIDESS 296
A H ++L++ ++ + ++I + ++ + + G L D +
Sbjct: 121 ASTHHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAIMDSPQQVCERYP 180
Query: 297 AKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD 356
A ++ +SQD A++ +G +GS+++G +L R ++ +
Sbjct: 181 A-----FVEKVFEMTESQDPTMVGVAVDTIGILGSNVEGKQVLQKTGTRFERLLVKIGYQ 235
Query: 357 RQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGL 412
+ +L K R D + +L E+ L+ S S L+ P L
Sbjct: 236 AKNASTEL-----------KIRCLDALSSLLYLPPEQQTDDLLRMTESWFSSLSRDPLEL 284
Query: 413 FLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
F + Q ++R A ++ T + +PW + + + V D S E+ K
Sbjct: 285 FRGISNQPFPDLRCAALKVFTAIADQPWAQKLMFNSPGFVEYVMDRSVERDK 336
>gi|345329776|ref|XP_003431420.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5
[Ornithorhynchus anatinus]
Length = 431
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 158/376 (42%), Gaps = 29/376 (7%)
Query: 97 KRLACKTVTCLLEDSDLEASCAL-QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAG 155
K +TV L + +E S A+ ++L + E+ ++ C+ + VA A + ++ +++
Sbjct: 22 KHRTGRTVRDQLVERIVENSDAVSEILNNPELLKQVIYCIGDEKLAVAKAVIKSLSRISL 81
Query: 156 FPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTL 215
G++ +F ++ DL N V + S + R RV LIVK+ SVS + L+T
Sbjct: 82 TQAGMECLF--ESNLLDDLKN-VMKTSDIVRYRVYELIVKISSVSAESLNYCTNTGLVTQ 138
Query: 216 LEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSATE---TILR 272
L ++ + D L + +E++ LA H ++L++ ++ + ++I + ++ +
Sbjct: 139 LIRELTGE-DVLVRATCIEMVTSLAHTPHGRQYLAQEGIIDKISNIIVGADSDPFSSFYL 197
Query: 273 SRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSS 332
+ G L D + ++ + QD A++ +G +GS+
Sbjct: 198 PGFVKFFGNLAIVDSPQQICERYPV-----FLEKVFEMAEGQDPTMIGVAVDTIGILGSN 252
Query: 333 IQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAE 390
++G +L +R + R GH + A K R D + + + +
Sbjct: 253 VEGKQVLQKT---GSR--FEHLLTRIGHQAKNAPTE------LKIRCLDAVSTLFHLPPD 301
Query: 391 ESLRHLIYEVASRSSKLT--PSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSK 447
+ L+ S S LT P LF + Q E+ A ++ T + +PW + S
Sbjct: 302 QQTEDLLRMTESWFSSLTREPLELFRGISTQPFPELHCAALKVFTAIANQPWAQKLMFSS 361
Query: 448 QEIINTVTDASTEQQK 463
+ + D S E K
Sbjct: 362 PGFVEYIVDRSVEHDK 377
>gi|148676681|gb|EDL08628.1| proteasome (prosome, macropain) 26S subunit, non-ATPase, 5, isoform
CRA_b [Mus musculus]
Length = 439
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 128/283 (45%), Gaps = 20/283 (7%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + L + +Q GLT SVK L + ++E+S+ ++
Sbjct: 71 VSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSE----AVTEI 126
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL N V +
Sbjct: 127 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKN-VMKT 183
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAE 241
+ + R RV LI+ + SVS + + L+T L + ++ + D L + +E++ LA
Sbjct: 184 NDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGE-DVLVRATCIEMVTSLAY 242
Query: 242 IQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDESSA- 297
H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 243 THHGRQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPVF 302
Query: 298 -KTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLL 339
+ V D SQD A++ +G +GSS++G +L
Sbjct: 303 LEKVFEMAD-------SQDPTMIGVAVDTVGILGSSVEGKQVL 338
>gi|26347233|dbj|BAC37265.1| unnamed protein product [Mus musculus]
Length = 504
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 172/411 (41%), Gaps = 34/411 (8%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + L + +Q GLT SVK L + ++E+S+ ++
Sbjct: 65 VSILERLLQAVEPIHLARNLRLDLQRGLTHPDDSVKTLTLSQIGRIVENSE----AVTEI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ ++ +F ++ DL N V +
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAVLEALF--ESNLLDDLKN-VMKT 177
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAE 241
+ + R RV LI+ + SVS + + L+T L + ++ + D L + +E++ LA
Sbjct: 178 NDVVRYRVYELIIDISSVSSESLNYCTTSGLVTQLLKELTGE-DVLVRATCIEMVTSLAY 236
Query: 242 IQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDESSAK 298
H ++L++ ++ + ++I + ++ + G L D +
Sbjct: 237 THHGRQYLAQEGVIDQISNIIVGADSDPFSGFYLPGFVKFFGNLAVMDSPQQICERYPV- 295
Query: 299 TVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQ 358
++ SQD A++ +G +GSS++G +L R ++ + +
Sbjct: 296 ----FLEKVFEMADSQDPTMIGVAVDTVGILGSSVEGKQVLQKTGTRFERVLMRVGYQAK 351
Query: 359 GHGKQLA-----ALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLF 413
+L A+ L ++ + +++D + + S+ SR S LF
Sbjct: 352 NASTELKIRCLDAVSSLLYLSPEQQTDDFLGMTESWFSSM--------SRDSL----ELF 399
Query: 414 LSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ Q E+ A ++ T + +PW + + + V D S E K
Sbjct: 400 RGISNQPFPELHCAALKVFTAIADQPWAQRLMFNSPGFVEFVMDRSVEHDK 450
>gi|332025116|gb|EGI65296.1| 26S proteasome non-ATPase regulatory subunit 5 [Acromyrmex
echinatior]
Length = 505
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 155/372 (41%), Gaps = 42/372 (11%)
Query: 80 HYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGN 139
Y+ V +T + SV+ L + + + L QLL D + +++ + + +
Sbjct: 88 RYLIEVSALITNPNASVRLLVLREFS----RTALHPQKIFQLLSDTTLLISIINRISDND 143
Query: 140 EEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGR-----VRVLSLIV 194
VA +M +KK+ PNG+ I++ G L+ + L + RV +IV
Sbjct: 144 LNVAECAMSIVKKIGENPNGLHILYK---------GELLRTFARLLQNDTISFRVYEVIV 194
Query: 195 KLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTL 254
+ S+ V ++ L L + + D L L+ LE+L +LA + +L + +
Sbjct: 195 DIAKTSQEALEVSAQSGFLNSL-INILENEDILLQLNALEILTQLAVFEEGLSYLEQQEV 253
Query: 255 LQLLC---SLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFL 311
L L S + + +L + G + + +F+ +ISA+ +
Sbjct: 254 LSKLVQKISQVNENPLSNLLIPGLMKFFGNVARHWPNELFV---RYPVIISAL---FDVI 307
Query: 312 QSQDSDECESALEALGQIGSSIQGATLL--LLCLPPAARHVIDAAFDRQGHGKQLAALHG 369
S D + AL+ LG + +SI+G L L P+A I R ++ L+
Sbjct: 308 DSGDQNILGPALDTLGYVSASIEGKYALQALGEAMPSALKKIAEMVQRMPTALRIRGLNN 367
Query: 370 LANIAGKTRSE-DKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA-AEIRLAG 427
LA I R E D IL SL L ++ P G+ +++ +Q A+IR AG
Sbjct: 368 LALILEVKRVEQDNRIL------SLTKLWFDSLCDD----PLGMIVAICRQPFADIRQAG 417
Query: 428 YRMITGLVARPW 439
++ + ++ W
Sbjct: 418 LEVLAVISSQVW 429
>gi|402896527|ref|XP_003911348.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5, partial
[Papio anubis]
Length = 406
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 173/405 (42%), Gaps = 34/405 (8%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + + + +Q GL SVK L + ++E+SD ++
Sbjct: 7 VSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEI 62
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
L + E+ ++ C+ N VA A++ ++ +++ G++ +F ++ DL + V +
Sbjct: 63 LNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLEALF--ESNLLDDLKS-VMKT 119
Query: 182 SSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAE 241
+ + R RV LIV++ SVS + + L+T L ++ + D L + +E++ LA
Sbjct: 120 NDIVRYRVYELIVEISSVSPESLNYCTTSGLVTQLLRELTGE-DVLVRATCIEMVTSLAY 178
Query: 242 IQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFIDESSAK 298
H ++L++ ++ + ++I + ++ + + G L D +
Sbjct: 179 THHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPI- 237
Query: 299 TVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQ 358
++ +SQD A++ +G +GS+++G +L R ++ R
Sbjct: 238 ----FVEKVFEMTESQDPTMTGVAVDTVGILGSNVEGKQVLQKTGTRFERLLM-----RI 288
Query: 359 GHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGLFL 414
GH + A + K R D I +L E+ L+ S S L+ P LF
Sbjct: 289 GHQSKNAP------VELKIRCLDAISSLLYLPPEQQTDDLLRMTESWFSALSRDPLELFR 342
Query: 415 SVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDAS 458
+ Q E+ A ++ TG + L EL ++ NTV S
Sbjct: 343 GISSQPFPELHCAALKVFTG--RKHLHLEELVGASQVKNTVESQS 385
>gi|50369289|gb|AAH76043.1| Zgc:110116 protein, partial [Danio rerio]
Length = 494
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 63 VCLE---RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCAL 119
VC+E R+ + L +Y +Q GL SVK L + + A
Sbjct: 53 VCVEILSRVLQALEPVQLAQNYRKALQSGLNHPDDSVKVLTLTQIGRVAG----HAEGVT 108
Query: 120 QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPAD--NKAATDLGNL 177
Q+L + EI ++ C+ VA ++ A+ KL+ G+D +F +D NK
Sbjct: 109 QMLNNVEILHDVIQCISVERIAVAKEAIAALSKLSNTKAGLDALFRSDLLNKLKD----- 163
Query: 178 VAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLY 237
V S + R RV LIV++ +VS + L++ + E ++ +D L + +E++
Sbjct: 164 VMLTSDIIRYRVYELIVEVSTVSPVSLGYCANSGLISQMLEELT-GDDVLVRATAIEMVT 222
Query: 238 ELAEIQHSAEFLSRTTLLQLLCSLIGNSATETI 270
LA+ QH ++L++ ++ + ++I + ++T
Sbjct: 223 NLAQSQHGRQYLAQQGIMDKISNMIIAAESDTF 255
>gi|210147423|ref|NP_001017573.2| proteasome 26S non-ATPase subunit 5 [Danio rerio]
Length = 505
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 63 VCLE---RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCAL 119
VC+E R+ + L +Y +Q GL SVK L + + A
Sbjct: 64 VCVEILSRVLQALEPVQLAQNYRKALQSGLNHPDDSVKVLTLTQIGRVAG----HAEGVT 119
Query: 120 QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPAD--NKAATDLGNL 177
Q+L + EI ++ C+ VA ++ A+ KL+ G+D +F +D NK
Sbjct: 120 QMLNNVEILHDVIQCISVERIAVAKEAIAALSKLSNTKAGLDALFRSDLLNKLKD----- 174
Query: 178 VAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLY 237
V S + R RV LIV++ +VS + L++ + E ++ +D L + +E++
Sbjct: 175 VMLTSDIIRYRVYELIVEVSTVSPVSLGYCANSGLISQMLEELT-GDDVLVRATAIEMVT 233
Query: 238 ELAEIQHSAEFLSRTTLLQLLCSLIGNSATETI 270
LA+ QH ++L++ ++ + ++I + ++T
Sbjct: 234 NLAQSQHGRQYLAQQGIMDKISNMIIAAESDTF 266
>gi|307174927|gb|EFN65167.1| 26S proteasome non-ATPase regulatory subunit 5 [Camponotus
floridanus]
Length = 503
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 141/336 (41%), Gaps = 44/336 (13%)
Query: 119 LQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLV 178
QLL D + +++ + + + VA +++ +KK+ PNG+ I++ G L+
Sbjct: 121 FQLLADTTLLISIINRIGDNDLTVAECAINIVKKVGKNPNGLHILYK---------GELL 171
Query: 179 AQCSSLGR-----VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSIL 233
+ L + R+ +IV + SR V ++ L L V + D L L+ L
Sbjct: 172 RTFARLLQNDTISFRIYEVIVDIAKTSREALEVSAQSGFLNSL-INVLENEDILLQLNAL 230
Query: 234 ELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAI----MISGRLLSKDDSH 289
E+L ELA + +L + +L L I A E L + I G + +
Sbjct: 231 EILTELAIFEEGLSYLEQQEVLNKLVQKIA-QANENPLSNLLIPGLMKFFGNVARHWPNE 289
Query: 290 MFIDESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLL---CLPPA 346
+F S +ISA+ + S D + SAL+ LG + +S++G L +P A
Sbjct: 290 LF---SKYPVIISAL---FEVIDSGDQNILGSALDTLGFVSASVEGKYALQALGDAMPGA 343
Query: 347 ARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSK 406
+ + D Q L + GL N+A +IL EE ++
Sbjct: 344 LKKIADIV---QRMPTTL-RIRGLNNLA--------LILEVKKEEQDNRILSLTKQWFDS 391
Query: 407 L--TPSGLFLSVLQQA-AEIRLAGYRMITGLVARPW 439
L P + +S+ +Q A+IR AG ++ + ++ W
Sbjct: 392 LCDDPLDMIVSICRQPFADIRQAGLEVLGVISSQVW 427
>gi|62531331|gb|AAH92738.1| Zgc:110116 [Danio rerio]
gi|182889512|gb|AAI65276.1| Zgc:110116 protein [Danio rerio]
Length = 291
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 63 VCLE---RIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCAL 119
VC+E R+ + L +Y +Q GL SVK L + + ++
Sbjct: 63 VCVEILSRVLQALEPVQLAQNYRTALQSGLNHPDDSVKVLTLTQIGRVAGHTE----GVT 118
Query: 120 QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPAD--NKAATDLGNL 177
Q+L + EI ++ C+ VA ++ A+ KL+ G+D +F +D NK
Sbjct: 119 QMLNNVEILHDVIQCISVERIAVAKEAIAALSKLSNTKAGLDALFRSDLLNKLKD----- 173
Query: 178 VAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLY 237
V S + R RV LIV++ +VS + L++ + E ++ +D L + +E++
Sbjct: 174 VMLTSDIIRYRVYELIVEVSTVSPVSLGYCANSGLISQMLEELT-GDDVLVRATAIEMVT 232
Query: 238 ELAEIQHSAEFLSRTTLLQLLCSL 261
LA+ QH ++L++ ++ + S+
Sbjct: 233 NLAQSQHGRQYLAQQGIMDKISSV 256
>gi|260828947|ref|XP_002609424.1| hypothetical protein BRAFLDRAFT_114978 [Branchiostoma floridae]
gi|229294780|gb|EEN65434.1| hypothetical protein BRAFLDRAFT_114978 [Branchiostoma floridae]
Length = 503
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 134/340 (39%), Gaps = 49/340 (14%)
Query: 142 VATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNL------VAQCSSLGRVRVLSLIVK 195
VAT + + I +L G+ ++F GNL V + S + R RV ++V
Sbjct: 141 VATMAGNVITRLGACEAGLRVLF---------TGNLLEELQRVMKESDVIRYRVYEVLVN 191
Query: 196 LFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTL- 254
L ++S + LLT L G D L ++ +++L LA+ H +L + +
Sbjct: 192 LQAISPLALQYCSDSGLLTQLT-GELSGGDVLVQVNCIDMLSSLAQSTHGLNWLEQQGVV 250
Query: 255 --LQLLCSLIGNSATETILRSRAIMISGRLLS-KDDSHMFIDESSAKTVISAIDGRLGFL 311
L+ + + + + I G + S + D M + K V ++D R
Sbjct: 251 GKLETMLTAADSDPMSSFYIPGVIKFFGTMASIRPDETMEHHGAFMKIVFESLDSR---- 306
Query: 312 QSQDSDECESALEALGQIGSSIQGATLL-------LLCLPPAARHVIDAAFDRQGHGKQL 364
D + A+E +G +GS G L CL R V++ + + +G L
Sbjct: 307 ---DPTMVKIAVETVGMVGSRPDGKMALEKQGNAWTDCLKQFGRIVLNPPTEMRMYG--L 361
Query: 365 AALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQAAE-I 423
L L ++ +ED++ + E + P +S++QQ + +
Sbjct: 362 TTLASLFSLQVTDHTEDQLSM------------LEGWFNTFSPKPMDTLMSIVQQPFQNL 409
Query: 424 RLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
AG ++ L +PW + + + + D STE+ K
Sbjct: 410 HCAGLAVLQALGNQPWAQRAMANFPGFVEYLVDRSTEKDK 449
>gi|395505599|ref|XP_003757127.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5
[Sarcophilus harrisii]
Length = 504
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 155/391 (39%), Gaps = 46/391 (11%)
Query: 88 GLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVATASM 147
GL+ +V L V ++E+S+ ++L E+ ++ C+ +A ++
Sbjct: 91 GLSHPDDAVVILTLSQVGRIVENSE----AVTEILNSPELLKEIIYCIGAEKLSIAKTAI 146
Query: 148 DAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVASVI 207
++ +++ G++ +F ++ DL N V Q S + R RV LIV++ SVS
Sbjct: 147 KSLSRISLTQAGLESLF--ESSLLDDLKN-VMQTSDIIRYRVYELIVEIASVSPESLKYC 203
Query: 208 FKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSAT 267
+ L+T L ++ +D L + +E++ LA H ++LS+ ++ + ++I + +
Sbjct: 204 TNSGLVTQLIRELT-GDDVLVRATCIEMVTSLAYSHHGRQYLSQEGIIDQISNIIVGADS 262
Query: 268 E---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECESALE 324
+ + + G L D + I+ + QD A++
Sbjct: 263 DPFSSFYLPGFVKFFGNLAIVDSPQQICERYPI-----FIEKVFEMAEGQDPTMIGVAVD 317
Query: 325 ALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSEDKII 384
LG +GS+++G +L Q G + L K S + I
Sbjct: 318 TLGILGSNVEGKQVL------------------QKTGSRFEHLLKRIGHQAKNASTELKI 359
Query: 385 LNADAEESLRHLIYEVAS----RSSKLTPSGLFLSVL--------QQAAEIRLAGYRMIT 432
DA SL HL ++ + R ++ S L L Q E+ A ++ T
Sbjct: 360 RCLDAISSLLHLPHDQQTDDLLRMTEFWFSSLTREPLEHFRGISTQPFPELHCAALKVFT 419
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ +PW + + + V D S E K
Sbjct: 420 AIANQPWAQRLMFNSPGFVEYVVDRSVEHDK 450
>gi|241082092|ref|XP_002409012.1| 26S proteasome regulatory complex, subunit PSMD5, putative [Ixodes
scapularis]
gi|215492598|gb|EEC02239.1| 26S proteasome regulatory complex, subunit PSMD5, putative [Ixodes
scapularis]
Length = 319
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 26/261 (9%)
Query: 210 ANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSATET 269
+L LL+E + + D L L+ LELL ELA H ++L + +L L S ET
Sbjct: 24 GHLDKLLQE--TNRGDVLVRLNALELLTELASKSHGLDYLEKKGILAKLSS-------ET 74
Query: 270 ILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFL----QSQDSDECESALEA 325
I ++ + S + ++S + ++ LGF+ Q DS A+E
Sbjct: 75 INVAKDPLGSLLGPGLLKFFGSMGQTSPQRLLVDYPQVLGFIFECVQDGDSASQAVAVET 134
Query: 326 LGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQL--AALHGLANIAGKTRSEDKI 383
+G IGSS+QG L +++ + + QG +L +L LANI K
Sbjct: 135 IGVIGSSVQGKRALRSHGDKMKQYLKTLSQNIQGGRSELRVRSLDALANILHIEGDSCKD 194
Query: 384 ILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLM 442
I+ L Y+ + P+ L L V +Q ++R + ++ + PW
Sbjct: 195 IIR------LTEQWYDAFGEA----PTRLLLGVCKQPFPDLRCSALGVVCEVAHSPWGQA 244
Query: 443 ELCSKQEIINTVTDASTEQQK 463
L S + + D STE K
Sbjct: 245 ALASHPGFLEYLLDRSTESDK 265
>gi|256618076|ref|ZP_05474922.1| cytolysin B transporter [Enterococcus faecalis ATCC 4200]
gi|256597603|gb|EEU16779.1| cytolysin B transporter [Enterococcus faecalis ATCC 4200]
Length = 709
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 88/156 (56%), Gaps = 16/156 (10%)
Query: 197 FSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQ 256
F V+RS S+I+KANL+T++++ +SK +T+E +I++ L+ + + + S+ T++
Sbjct: 251 FFVNRSSGSMIYKANLITMVQQMLSK--NTIE--NIIDYLFMIVYFIYLTNYSSKLTIIT 306
Query: 257 LL-CSLI-GNSATETILRSRAIMISGRLLSKDD--SHMFIDESSAKTVISAIDGRLGFLQ 312
++ C LI NS T + + + I+GR++ ++++ S I ++ G+
Sbjct: 307 IIFCLLILINSLTYSKINYK---INGRVIEYQSEIQSLYVEIFSGMETIKSL-GKEKVFF 362
Query: 313 SQDSDECESALEALGQIGSS---IQG-ATLLLLCLP 344
++ S+ ++L++L Q G + + G +T LL LP
Sbjct: 363 TRWSNIFSNSLKSLSQQGKAAAWLSGISTTLLFTLP 398
>gi|422700385|ref|ZP_16758232.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX1342]
gi|315171143|gb|EFU15160.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX1342]
Length = 709
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 88/156 (56%), Gaps = 16/156 (10%)
Query: 197 FSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQ 256
F V+RS S+I+KANL+T++++ +SK +T+E +I++ L+ + + + S+ T++
Sbjct: 251 FFVNRSSGSMIYKANLITMVQQMLSK--NTIE--NIIDYLFMIVYFIYLTNYSSKLTIIT 306
Query: 257 LL-CSLI-GNSATETILRSRAIMISGRLLSKDD--SHMFIDESSAKTVISAIDGRLGFLQ 312
++ C LI NS T + + + I+GR++ ++++ S I ++ G+
Sbjct: 307 IIFCLLILINSLTYSKINYK---INGRVIEYQSEIQSLYVEIFSGMETIKSL-GKEKVFF 362
Query: 313 SQDSDECESALEALGQIGSS---IQG-ATLLLLCLP 344
++ S+ ++L++L Q G + + G +T LL LP
Sbjct: 363 TRWSNIFSNSLKSLSQQGKAAAWLSGISTTLLFTLP 398
>gi|61098300|ref|NP_001012815.1| 26S proteasome non-ATPase regulatory subunit 5 [Gallus gallus]
gi|60098827|emb|CAH65244.1| hypothetical protein RCJMB04_11e7 [Gallus gallus]
Length = 504
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 174/412 (42%), Gaps = 36/412 (8%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + +I + ++ GL SVK L+ V ++E+SD ++
Sbjct: 65 VAVLERLLQALDPLYVIQNLREELRKGLFHPDDSVKILSISQVGRIVENSD----AVREI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVATA--SMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA 179
L E+ +++C+ G E++A A ++ ++ ++A +G++ +F + +DL N++
Sbjct: 121 LNSPELLRQIINCI--GGEKIAVAKEAIKSLSRIAQTQDGLEALFVSS--LLSDLKNVMG 176
Query: 180 QCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYEL 239
+ + R RV LIV++ SVS + + L++ L G +D L + +E++ L
Sbjct: 177 -TNDVVRYRVYELIVEISSVSADSLNYCANSGLISDLI-GELTGDDVLVRATCIEMVTSL 234
Query: 240 AEIQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSHMFIDESS 296
A H ++L++ ++ + ++I + ++ I G L D +
Sbjct: 235 AHSPHGRQYLAQQGIIDKISNIIIGAESDPFSGFYLPGFIKFFGNLAVVDSPQQICERYP 294
Query: 297 AKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFD 356
++ +S D A++ LG +GSS++G +L AR +
Sbjct: 295 V-----FMEKVFEMAESHDPTMNGVAVDTLGILGSSVEGKQVL-----QKARGRFQNLLN 344
Query: 357 RQGHGKQLAALHGLANIAGKTRSEDKI--ILNADAEESLRHLIYEVASRSSKLT--PSGL 412
+ GH + A + R D + +L E+ L+ S S L+ P L
Sbjct: 345 KIGHQAKNAPTE------LRLRCLDAVSSLLYLPPEQQTEDLLRMTESWFSSLSSQPLEL 398
Query: 413 FLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
F S+ Q ++ R+ T + + W + + + + D S E K
Sbjct: 399 FRSISTQPFPDLHCGALRVFTAIANQAWAQKLMLNSPGFVEYIVDRSVEPDK 450
>gi|126294022|ref|XP_001364758.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5
[Monodelphis domestica]
Length = 504
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 156/391 (39%), Gaps = 46/391 (11%)
Query: 88 GLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLINGNEEVATASM 147
GL+ +V L V ++E+S+ ++L E+ ++ C+ +A A++
Sbjct: 91 GLSHPDDAVVILTLAQVGRIVENSE----AVTEILNSPELLKDIIYCIGGEKLSIAKAAI 146
Query: 148 DAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVSRSVASVI 207
++ ++A G++ +F + DL N V + S + R RV LIV++ SVS
Sbjct: 147 KSLSRIALTQAGLESLF--GSSLLDDLKN-VMKTSDIVRYRVYELIVEISSVSPESLKYC 203
Query: 208 FKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSAT 267
+ L+T L ++ +D L + +E++ LA H ++L++ ++ + ++I +
Sbjct: 204 TDSGLVTQLIRELT-GDDVLVRATCIEMVTSLAHTHHGRQYLAQEGIIDQISNIIVGADL 262
Query: 268 E---TILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSDECESALE 324
+ + + G L D + ++ + QD A++
Sbjct: 263 DPFSSFYLPGFVKFFGNLAIVDSPQQICERYPI-----FVEKVFEMAEGQDPTMIGVAVD 317
Query: 325 ALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQLAALHGLANIAGKTRSEDKII 384
LG +GS+++G +L Q G + L K S + I
Sbjct: 318 TLGILGSNVEGKQVL------------------QKTGSRFEHLLKRIGHQAKNASTELKI 359
Query: 385 LNADAEESLRHLIYEVASRS---------SKLT--PSGLFLSVLQQA-AEIRLAGYRMIT 432
DA SL HL ++ + S LT P F + Q +E+ A ++ T
Sbjct: 360 RCLDAISSLLHLPHDQQTEDLLRMTECWFSSLTRDPLEHFRGISTQPFSELHCAALKVFT 419
Query: 433 GLVARPWCLMELCSKQEIINTVTDASTEQQK 463
+ +PW + + + V D S E+ K
Sbjct: 420 AIANQPWAQKLMLNSPGFVEYVMDRSVERDK 450
>gi|295114472|emb|CBL33109.1| ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal
double-glycine peptidase domain [Enterococcus sp. 7L76]
Length = 709
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 87/156 (55%), Gaps = 16/156 (10%)
Query: 197 FSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQ 256
F V+RS S+I+KANL+T++++ +SK +T+E +I++ L+ + + + S T++
Sbjct: 251 FFVNRSSGSMIYKANLITMVQQMLSK--NTIE--NIIDYLFMIVYFIYLTNYSSELTIIT 306
Query: 257 LL-CSLI-GNSATETILRSRAIMISGRLLSKDD--SHMFIDESSAKTVISAIDGRLGFLQ 312
++ C LI NS T + + + I+GR++ ++++ S I ++ G+
Sbjct: 307 IIFCLLILINSLTYSKINYK---INGRVIEYQSEIQSLYVEIFSGMETIKSL-GKEKVFF 362
Query: 313 SQDSDECESALEALGQIGSS---IQG-ATLLLLCLP 344
++ S+ ++L++L Q G + + G +T LL LP
Sbjct: 363 TRWSNIFSNSLKSLSQQGKAAAWLSGISTTLLFTLP 398
>gi|422720910|ref|ZP_16777517.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0017]
gi|315031859|gb|EFT43791.1| ABC transporter, ATP-binding protein [Enterococcus faecalis TX0017]
Length = 575
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 87/156 (55%), Gaps = 16/156 (10%)
Query: 197 FSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQ 256
F V+RS S+I+KANL+T++++ +SK +T+E +I++ L+ + + + S+ T++
Sbjct: 117 FFVNRSSGSMIYKANLITMVQQMLSK--NTIE--NIIDYLFMIVYFIYLTNYSSKLTIIT 172
Query: 257 LL-CSLI-GNSATETILRSRAIMISGRLL--SKDDSHMFIDESSAKTVISAIDGRLGFLQ 312
++ C LI NS T + + + I+GR++ + ++++ S I ++ G+
Sbjct: 173 IIFCLLILINSLTYSKINYK---INGRVIEYQSEIQSLYVEIFSGMETIKSL-GKEKVFF 228
Query: 313 SQDSDECESALEALGQIGSSIQG----ATLLLLCLP 344
++ S+ ++L++L Q G + +T LL LP
Sbjct: 229 TRWSNIFSNSLKSLSQQGKAAAWLCGISTTLLFTLP 264
>gi|395740894|ref|XP_003777486.1| PREDICTED: LOW QUALITY PROTEIN: 26S proteasome non-ATPase
regulatory subunit 5 [Pongo abelii]
Length = 512
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 175/415 (42%), Gaps = 35/415 (8%)
Query: 62 VVCLERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQL 121
V LER+ + + + +Q GL SVK L + ++E+SD ++
Sbjct: 65 VSILERLLQAMEPVHMARNLRVDLQRGLIHPDDSVKILTLSQIGRIVENSD----AVTEI 120
Query: 122 LIDYEIYPLLLDCLINGNEEVA------TASMDAIKKLAGFPNGIDIIFPADNKAATDLG 175
L + E+ ++ C+ N VA T ++ ++ +++ G++ +F ++ DL
Sbjct: 121 LNNAELLKQIVYCIGGENLSVAKSGESTTIAIKSLSRISLTQAGLEALF--ESNLLDDLK 178
Query: 176 NLVAQCSSLGRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILEL 235
+ V + + + R++V LIV++ SVS + + L+T L ++ + D L + +E+
Sbjct: 179 S-VMKTNDIVRLQVFQLIVEISSVSPESLNYCTTSGLVTQLLRELTGE-DVLVRATCIEM 236
Query: 236 LYELAEIQHSAEFLSRTTLLQLLCSLIGNSATE---TILRSRAIMISGRLLSKDDSHMFI 292
+ LA H ++L++ ++ + ++I + ++ + + G D
Sbjct: 237 VTSLAYTYHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNWPVMDSPQQIC 296
Query: 293 DESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAARHVID 352
+ ++ ++SQD A++ +G +GS+++G +L R ++
Sbjct: 297 ERYPI-----FVEKVFEMIESQDPHYLVVAVDTVGILGSNVEGKQVLQKTGTRFERLLM- 350
Query: 353 AAFDRQGHGKQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLT--PS 410
R GH + A + + G S +L E+ L+ S S L+ P
Sbjct: 351 ----RIGHQSKNAPVELKIRMFGCISS----LLYLPPEQQTDDLLRMTESWFSSLSRDPL 402
Query: 411 GLFLSVLQQA-AEIRLAGYRMITGLVARPWCL-MELCSKQEIINTVTDASTEQQK 463
LF + Q E+ A ++ T + +PW + S + + N D S E K
Sbjct: 403 ELFRGLSSQPFPELHCAALKVFTAIANQPWAQKLMFNSPRFLXNMWVDRSVEHDK 457
>gi|156545726|ref|XP_001605001.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
[Nasonia vitripennis]
Length = 504
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 155/357 (43%), Gaps = 39/357 (10%)
Query: 120 QLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA 179
QLL ++ L+ D L + VA +MD +KK+ +G+ +I+ + L+A
Sbjct: 122 QLLTKVDLLNLVTDTLADEELSVAKRAMDVLKKIGQNTDGLKLIYSG--VLLRSIAKLLA 179
Query: 180 QCSSLGRVRVLSLIVKLFSVSRSV--ASVI--FKANLLTLLEEGVSKKNDTLETLSILEL 235
S + + RV ++V + S+ ASV F +L+++L+ +D L L+ LE
Sbjct: 180 -TSDIVKFRVYEVVVDIAKNSKECLEASVRSGFLQSLISMLD-----SDDILLQLNALET 233
Query: 236 LYELAEIQHSAEFLSRTTLLQLLCSLIGNSATETILRSRAI----MISGRLLSKDDSHMF 291
L ELA Q ++L + +LQ L I A ET L + I G + + +F
Sbjct: 234 LRELALSQEGLDYLEQQEVLQQLSEKIAK-AHETPLSNLLIPGLMKFFGYVAQLCPNEIF 292
Query: 292 IDESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLL--LLCLPPAARH 349
S VIS++ ++S D AL+ LG + S+++G L L P+A
Sbjct: 293 ---SRYPVVISSL---FEVIESDDQTILAIALDTLGYVSSTVKGKYALQELGNAMPSALK 346
Query: 350 VIDAAFDRQGHGKQLAALHGLANI--AGKTRSEDKIILNADAEESLRHLIYEVASRSSKL 407
I + +L L+ L I K+ +++I+ SL ++
Sbjct: 347 KIAEIIQKMPTELRLRGLNSLTRILYVEKSEQDNRIV-------SLTKSWFDALCEE--- 396
Query: 408 TPSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
P L +S+ +Q A+IR A ++ + ++ W + + ++ + D + E K
Sbjct: 397 -PLKLIVSLCKQPFADIRQASLDVLVVVASQEWGQEYISTHPGLVEFLLDRNVESFK 452
>gi|56789608|gb|AAH88711.1| LOC496243 protein, partial [Xenopus laevis]
Length = 502
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 184/457 (40%), Gaps = 72/457 (15%)
Query: 40 PLSVILNTLQTKPDVPGLE-------------DTLVVC---LERIFKTKYGASLIPHYMP 83
P+S++ K VPGL + + VC LER + + +Y
Sbjct: 31 PMSIL------KEKVPGLRLGGIFSLLNVNDREQITVCVGILERFLQALEPVDIARNYKE 84
Query: 84 FVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCL--INGNE- 140
+Q GL SVK LA V ++E C++ L + LL + I G++
Sbjct: 85 ELQRGLYHPDDSVKTLAITQVGRIVE-------CSVALTEIFNNLELLKQIILSIGGDKL 137
Query: 141 EVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKLFSVS 200
VA ++ ++ K+A +G++++F + A +L ++A S + R R+ L+V++ SVS
Sbjct: 138 SVAKEAIKSLSKIAQTTSGLNVLFSTNLLA--ELKKVMA-ISDIVRYRIYELVVEISSVS 194
Query: 201 RSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQHSAEFLSRTTLLQLLCS 260
+ +++ L + ++ +D L ++ E++ LA H ++L++ ++ + +
Sbjct: 195 AESLEYCVNSGIVSQLLDELT-GDDVLIRVTCTEMVTSLATPLHGRQYLAQQGIIDKISN 253
Query: 261 LIGNSATET---ILRSRAIMISGRLLSKDDSHMFIDESSAKTVISAIDGRLGFLQSQDSD 317
+I + ++ + G L + D ++ A ++ + G L D
Sbjct: 254 MILGADSDPFSGFYLPGLVKFFGNLAAMDSPQQICEQYPA--FLNKVYDMAGGL---DIT 308
Query: 318 ECESALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGHGKQ----------LAAL 367
A++ LG +GS+++G +L H I R GH + L A+
Sbjct: 309 MLGVAVDTLGILGSNVEGKQVLQKT--GGQFHTI---LKRIGHHAKNSPTEIRVRCLDAI 363
Query: 368 HGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFLSVLQQA-AEIRLA 426
L I +ED + + + HL+ P F S+ Q E+
Sbjct: 364 SSLLYIPEDCHTEDLLAMAT----TWFHLL--------SAQPMDFFRSIASQPFPELHCG 411
Query: 427 GYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
++ T + +PW + I + D + + K
Sbjct: 412 ALKVFTAVANQPWAQKLMIESPGFIEYIVDRTVDPNK 448
>gi|291229558|ref|XP_002734738.1| PREDICTED: proteasome 26S non-ATPase subunit 5-like [Saccoglossus
kowalevskii]
Length = 507
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 173/424 (40%), Gaps = 66/424 (15%)
Query: 65 LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLED---SDLEASCALQL 121
L+R+F S+I Y + G+ ++S +K L CLL+ + E L
Sbjct: 71 LKRLFAASDPCSVITQYKDEIYSGIKSESVQMKEL------CLLQVYRCASTEKGRQELL 124
Query: 122 LIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQC 181
+I L + CL + V + +K L G++ +F GNL+ +
Sbjct: 125 QSSLDILYLCVQCLADKEISVGKEAGRVLKCLGESQAGLEFLFQ---------GNLLDKM 175
Query: 182 SSLG------RVRVLSLIVKLFSVSRSVASVIFKAN---LLTLLEEGVSKKNDTLETLSI 232
SL R RV + V +F S ++++ +N + L+ E +++D L ++
Sbjct: 176 KSLMKIDDVIRYRVYEVAVDIFLTSPQ--AIVYGSNSGIITQLISE--LERDDILIQMNC 231
Query: 233 LELLYELAEIQHSAEFLSRTTLLQLLCSLIGNSATETI---LRSRAIMISGRLLSKDDSH 289
+E+L +A QH ++L + ++ + S++ + ++ + L I G + + S
Sbjct: 232 IEMLSTIASCQHGLQYLDQQGIVGKVESIMVAAESDPLVGFLMPGLIKFFGSIARYEPSE 291
Query: 290 MFIDES-SAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPPAAR 348
+F +TV + L S D + A++ +G +GS++ G L L +
Sbjct: 292 VFEKHPLFVRTVFT-------LLTSSDLTQKGVAIDTVGIVGSTVAGK----LVLHKQGK 340
Query: 349 HVID-----AAFDRQGHG----KQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYE 399
++ID + +Q + L ++ L ++ ++ED + L E
Sbjct: 341 NMIDCMRVMGSLVQQPPTEMRIRTLESIAALLHVKKAEQTEDILSLT-------ERWFLE 393
Query: 400 VASRSSKLTPSGLFLSVLQQAAEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDAST 459
++S+ +F Q EIR + ++ + +PW ++ + D ST
Sbjct: 394 ISSKPM----DTMFGLCNQPFGEIRGGAFLVLQSIGNQPWGQRQMNDYPGFTEYILDRST 449
Query: 460 EQQK 463
E +K
Sbjct: 450 ESEK 453
>gi|307211394|gb|EFN87521.1| 26S proteasome non-ATPase regulatory subunit 5 [Harpegnathos
saltator]
Length = 507
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 147/357 (41%), Gaps = 38/357 (10%)
Query: 119 LQLLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLV 178
QLL D + +++ + + + VA +M+ +KK+ PNG+ I++ G L+
Sbjct: 125 FQLLEDTNVLICIVNRIGDNDLTVAECAMNIVKKIGADPNGLHILYK---------GELL 175
Query: 179 AQCSSLGR-----VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSIL 233
+ L + RV +IV + SR+ + + LL L + V D L L+ L
Sbjct: 176 RTFAKLLQKDTINFRVYEVIVDIAKTSRAALEISAQLGLLDRLID-VLDDEDVLLQLNAL 234
Query: 234 ELLYELAEIQHSAEFLSRTTLLQLLCSLIGN---SATETILRSRAIMISGRLLSKDDSHM 290
E+L +LA + +L + +L L I S+ +L + G + + +
Sbjct: 235 EILTQLAIFEEGLSYLEQREVLSKLVQKIAQANESSLSNLLIPGLMKFFGNVARHWPNEL 294
Query: 291 FIDESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLL--LLCLPPAAR 348
F S +ISA+ + D AL+ LG + S++G L L A
Sbjct: 295 F---SMYPVIISAL---FEVIDGGDQTLLGPALDTLGFVSVSVEGKYALQALGDAMVGAL 348
Query: 349 HVIDAAFDRQGHGKQLAALHGLANIAGKTRSE-DKIILNADAEESLRHLIYEVASRSSKL 407
I + ++ L+ L I R+E D IL SL L ++ S
Sbjct: 349 KTIGEVVQKMPTALRIRGLNNLTLILDVKRAEQDNRIL------SLTKLWFDSLCDDS-- 400
Query: 408 TPSGLFLSVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
G+ +++ +Q A+IR AG ++ + ++ W + + ++ + D S E K
Sbjct: 401 --LGMIVAICRQPFADIRQAGLEVLAVISSQVWGQEYISTYPGLVEFLLDRSVETFK 455
>gi|302787883|ref|XP_002975711.1| hypothetical protein SELMODRAFT_415694 [Selaginella moellendorffii]
gi|300156712|gb|EFJ23340.1| hypothetical protein SELMODRAFT_415694 [Selaginella moellendorffii]
Length = 474
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 79/203 (38%), Gaps = 54/203 (26%)
Query: 17 ASDFAYHPGVQNDAAAKKFLDRFPLSVILNTLQTKPDVPGLEDTLVVCLERIFKTKYGAS 76
A D + P +++ FL ++P V+ L T P L ++ + +G S
Sbjct: 165 AIDPVHLPRALPESSVSDFLSKYPFPVLSRVLFTA-GTPALVRAMLS------RRSFGHS 217
Query: 77 LIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLIDYEIYPLLLDCLI 136
++ +P+ GL A S V+RLAC ++ C Q + D E
Sbjct: 218 MLIKILPYANAGLNAASPQVRRLACSMFR-----MAIQVLCKQQQICDKE---------- 262
Query: 137 NGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSLGRVRVLSLIVKL 196
++ + DAI+KLA G PA ++R LSL ++
Sbjct: 263 ------SSVAKDAIEKLAKSSAG-----PA-------------------QIRALSLAARI 292
Query: 197 FSVSRSVASVIFKANLLTLLEEG 219
F + S A+ ++ L LL EG
Sbjct: 293 FGL--SAAAPFLQSLLRHLLAEG 313
>gi|410903616|ref|XP_003965289.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 5-like
isoform 2 [Takifugu rubripes]
Length = 461
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 163/410 (39%), Gaps = 81/410 (19%)
Query: 65 LERIFKTKYGASLIPHYMPFVQVGLTADSHSVKRLACKTVTCLLEDSDLEASCALQLLID 124
LERI L+ Y +Q GLT + +VK LA + +LE D A ++L +
Sbjct: 68 LERILIALSPVCLVQKYRAELQAGLTHPNDTVKILALTQIGRILEHPD----AATEVLNN 123
Query: 125 YEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVAQCSSL 184
+++ ++ C+ E++A A LV + SS+
Sbjct: 124 HDVLQAVIQCI--REEKIAVAK-----------------------------QLVVEISSV 152
Query: 185 GRVRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILELLYELAEIQH 244
+ + A+ F + LL G +D L + +E++ LA+ QH
Sbjct: 153 SPISL-----------GYCANSSFISQLL-----GELTGDDVLVRATAIEMVTTLAQSQH 196
Query: 245 SAEFLSRTTLLQLLCSLIGNSATETILRSRAIMISGRLLSKDDSHMFIDESSAKT--VIS 302
++L++ ++ + ++I + T++ ++ I G L K ++ I +S +
Sbjct: 197 GRQYLAQQGIMDKISNMIRGAETDSF---SSLYIPG--LVKFFGNLAIMDSPQQVCETYP 251
Query: 303 AIDGRLGFLQSQDSDECES--ALEALGQIGSSIQGATLLLLCLPPAARHVIDAAFDRQGH 360
A ++ F + D D + AL+ LG +GS+I+G +L R V+
Sbjct: 252 AFQNKV-FEMALDPDPVMNGVALDTLGLLGSTIEGKQVLQKT-GEQFRTVLRRMSQLASS 309
Query: 361 G------KQLAALHGLANIAGKTRSEDKIILNADAEESLRHLIYEVASRSSKLTPSGLFL 414
G + L A+ L + + ++ED + L ES HL+ + P +
Sbjct: 310 GATELRVRSLDAISQLLTLQPEQQTEDLLALT----ESWFHLLSK--------QPMDMIR 357
Query: 415 SVLQQA-AEIRLAGYRMITGLVARPWCLMELCSKQEIINTVTDASTEQQK 463
++ Q E+ R+ T + +PW + S + V D ST Q K
Sbjct: 358 NISTQPFPELHCGALRIFTAIATQPWGQRLMVSTPSFMEFVLDRSTGQTK 407
>gi|325181222|emb|CCA15636.1| general transcription factor IIH subunit putative [Albugo laibachii
Nc14]
Length = 1033
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 159/370 (42%), Gaps = 53/370 (14%)
Query: 121 LLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA- 179
LL D EI + D + + N E+AT + + + +LA + +++ ++ DL A
Sbjct: 638 LLADKEIMHAICDLIASENGEIATKASNVVVELAA-GDALEV-----HETLVDLLLRNAL 691
Query: 180 QCSSLGR----VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILEL 235
+C + G+ +R L I L S + V + +L G + +D+L L+I+E+
Sbjct: 692 ECDTTGKSVELMRYLETIAHLCSTEKMSQYVASSGAMKYIL--GYLESSDSLLILNIMEV 749
Query: 236 LYELAEIQHSAEFLSRTTLLQLLCSLIGNS--ATETI-----LRSRAIMISGRLLSKDD- 287
L +L + + +F+S + L+ L ++ + TET+ + ++ ++ + + D
Sbjct: 750 LPKLCQTKAGLQFISDSDTLRKLLAMADDPLFGTETLRFIGEMSTKVAELNVKGWNWGDP 809
Query: 288 --SHMFIDESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPP 345
+ F D+ K QD DE + + L + +
Sbjct: 810 VLTQAFFDKVKDKI--------------QDPDEIQQIAAMDAIAAFAASSHKELQVLI-- 853
Query: 346 AARHVIDAAFDRQGHGKQL----AALHGLANIAG---KTRSEDKIILNADAE-ESLRHLI 397
+H I + + + ++ + LHGL + + + E + IL DAE +L I
Sbjct: 854 --QHEIYSEYLQLASSLKMPLKVSCLHGLKKVLAEPTRLKREGRDILEKDAEIWALNQTI 911
Query: 398 YEVASRSSKLTPSGLFL-SVLQQA-AEIRLAGYRMITGLVAR--PWCLMELCSKQEIINT 453
Y+ R+S+ + +L S L+Q E+R+A Y ++ + A+ W + + S
Sbjct: 912 YQAIGRASRSNSTTEYLMSFLKQPFEELRIAVYGLLQAVAAQNAEWGIQTILSYGGFFEY 971
Query: 454 VTDASTEQQK 463
+ D +TE K
Sbjct: 972 ILDRNTEPTK 981
>gi|325181848|emb|CCA16303.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 522
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 159/370 (42%), Gaps = 53/370 (14%)
Query: 121 LLIDYEIYPLLLDCLINGNEEVATASMDAIKKLAGFPNGIDIIFPADNKAATDLGNLVA- 179
LL D EI + D + + N E+AT + + + +LA + +++ ++ DL A
Sbjct: 127 LLADKEIMHAICDLIASENGEIATKASNVVVELAA-GDALEV-----HETLVDLLLRNAL 180
Query: 180 QCSSLGR----VRVLSLIVKLFSVSRSVASVIFKANLLTLLEEGVSKKNDTLETLSILEL 235
+C + G+ +R L I L S + V + +L G + +D+L L+I+E+
Sbjct: 181 ECDTTGKSVELMRYLETIAHLCSTEKMSQYVASSGAMKYIL--GYLESSDSLLILNIMEV 238
Query: 236 LYELAEIQHSAEFLSRTTLLQLLCSLIGNS--ATETI-----LRSRAIMISGRLLSKDD- 287
L +L + + +F+S + L+ L ++ + TET+ + ++ ++ + + D
Sbjct: 239 LPKLCQTKAGLQFISDSDTLRKLLAMADDPLFGTETLRFIGEMSTKVAELNVKGWNWGDP 298
Query: 288 --SHMFIDESSAKTVISAIDGRLGFLQSQDSDECESALEALGQIGSSIQGATLLLLCLPP 345
+ F D+ K QD DE + + L + +
Sbjct: 299 VLTQAFFDKVKDKI--------------QDPDEIQQIAAMDAIAAFAASSHKELQVLI-- 342
Query: 346 AARHVIDAAFDRQGHGKQL----AALHGLANIAG---KTRSEDKIILNADAE-ESLRHLI 397
+H I + + + ++ + LHGL + + + E + IL DAE +L I
Sbjct: 343 --QHEIYSEYLQLASSLKMPLKVSCLHGLKKVLAEPTRLKREGRDILEKDAEIWALNQTI 400
Query: 398 YEVASRSSKLTPSGLFL-SVLQQA-AEIRLAGYRMITGLVAR--PWCLMELCSKQEIINT 453
Y+ R+S+ + +L S L+Q E+R+A Y ++ + A+ W + + S
Sbjct: 401 YQAIGRASRSNSTTEYLMSFLKQPFEELRIAVYGLLQAVAAQNAEWGIQTILSYGGFFEY 460
Query: 454 VTDASTEQQK 463
+ D +TE K
Sbjct: 461 ILDRNTEPTK 470
>gi|159485804|ref|XP_001700934.1| hypothetical protein CHLREDRAFT_167657 [Chlamydomonas reinhardtii]
gi|158281433|gb|EDP07188.1| predicted protein [Chlamydomonas reinhardtii]
Length = 475
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 390 EESLRHLIYEVASRSSKLT-----------PSGLFLSVLQQA-AEIRLAGYRMITGLVAR 437
EE+LR +YE S P + L++L Q E+RLA YR + L R
Sbjct: 336 EETLRRCVYEACGGPSAAAGPSPAAAPLKRPGEVVLALLAQPFVELRLAAYRCVAALALR 395
Query: 438 PWCLMELCSKQEIINTVTDASTE 460
W +EL + ++ + DA +E
Sbjct: 396 SWFAVELLTSPDLAARLMDAGSE 418
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,150,420,271
Number of Sequences: 23463169
Number of extensions: 226003015
Number of successful extensions: 590777
Number of sequences better than 100.0: 144
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 590546
Number of HSP's gapped (non-prelim): 194
length of query: 463
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 317
effective length of database: 8,933,572,693
effective search space: 2831942543681
effective search space used: 2831942543681
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)