BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012449
(463 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 321 bits (823), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 238/479 (49%), Positives = 291/479 (60%), Gaps = 88/479 (18%)
Query: 11 FQLGAVEFLRKPLSEDKLRNLWQHVVHKAFNAGGSALSDSLKPVKESVVSMLHLKLENGE 70
LGAVEFL+KPLS +KL+N+WQHVVHKAFN GGS +S SLKPVKESVVSMLHL+
Sbjct: 114 IALGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE----- 168
Query: 71 SKNEKSENTEYVLVPQQSDNEQSVPNDKYPAPSTPQLKQGGRLLDDIDCQDNTNFS---- 126
T+ + +K PAPSTPQLKQ RLLD DCQ+N NFS
Sbjct: 169 --------TDMTI------------EEKDPAPSTPQLKQDSRLLDG-DCQENINFSMENV 207
Query: 127 ---TEKESAE--QD-GESKFVETTCGNSIAEGTLQEDKP--QRPRETIVKEEHDPTNGSK 178
TEK++ E QD GESK V+TT L +DK + R KEE T
Sbjct: 208 NSSTEKDNMEDHQDIGESKSVDTT------NRKLDDDKVVVKEERGDSEKEEEGETGDLI 261
Query: 179 TE-CNMLPLPYEKDNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQA 237
+E + + + ++D K N K+SG++N GNK +RKK VDWTPELHKKFVQA
Sbjct: 262 SEKTDSVDIHKKEDETKPIN-------KSSGIKNVSGNKTSRKK--VDWTPELHKKFVQA 312
Query: 238 VEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKED-DRKWPHARDQML 296
VEQLGVDQAIPSRILELMKV LTRHNVASHLQK+R HR++ILPK+D + +W +R+
Sbjct: 313 VEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRENHR 372
Query: 297 ---RNY----YPHKPIMAFPPYHSNHLVPTGPVYPVWGAPSNHLAAVQMWAPPGYPPWQQ 349
RNY H+P+MA+P + + P G + P+W P + G PP
Sbjct: 373 PNQRNYNVFQQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSI---------GQPP--- 420
Query: 350 AESWNWK-PYPGMPADAWGCPVMPLPNGPY---SSFPQGASGYHNSGVDDNSYAMPQNSV 405
W+WK PYP + +AWGCPV P G Y S+ G Y N G + MP +
Sbjct: 421 --PWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGGFQYPN-GAETGFKIMPAS-- 475
Query: 406 DLHPAEEVIDKVVKEAISKPWLPLPLGLKPPSADSVLAELSRQGISTIPPR---INGSH 461
P EE++D+VVKEAISKPWLPLPLGLKPPSA+SVLAEL+RQGIS +P INGSH
Sbjct: 476 --QPDEEMLDQVVKEAISKPWLPLPLGLKPPSAESVLAELTRQGISAVPSSSCLINGSH 532
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 143/273 (52%), Gaps = 69/273 (25%)
Query: 219 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 278
+KK KVDWTPELH+KFVQAVEQLGVD+A+PSRILE+M V+ LTRHNVASHLQKYR HR+H
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 279 ILPKE-DDRKWPHARDQMLRNYYPH--------KPIMAFPPY----HSNHLVPTGPVYPV 325
+L +E + W R + P + +PP+ H H P V
Sbjct: 205 LLAREAEAASWNLRRHATVAVPGVGGGGKKPWTAPALGYPPHVAPMHHGHFRPLH----V 260
Query: 326 WGAPS------NHLAAVQM-------------WAPPGYPPWQQAESWNWKPYPGMPADAW 366
WG P+ N A+ W PG+PP+ W+ +P
Sbjct: 261 WGHPTWPKHKPNTPASAHRTYPMPAIAAAPASW--PGHPPY-----WHQQPL-------- 305
Query: 367 GCPVMPLPNGPYSSFPQG---ASGYHNS-GVDDNSYAMPQNSVDLHPAEEVIDKVVKEAI 422
+PQG AS H+S GV +D+HP+ E ID + + I
Sbjct: 306 --------------YPQGYGMASSNHSSIGVPTRQLGPTNPPIDIHPSNESIDAAIGDVI 351
Query: 423 SKPWLPLPLGLKPPSADSVLAELSRQGISTIPP 455
SKPWLPLPLGLKPPS D V+ EL RQG+S +PP
Sbjct: 352 SKPWLPLPLGLKPPSVDGVMTELQRQGVSNVPP 384
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/286 (37%), Positives = 153/286 (53%), Gaps = 40/286 (13%)
Query: 204 SKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRH 263
S AS N N ++K+KVDWTPELH++FV+AVEQLGVD+A+PSRILELM V LTRH
Sbjct: 136 SSASSKNNRISNNEGKRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRH 195
Query: 264 NVASHLQKYRMHRRHILPKE-DDRKWPHAR------------DQMLRNYYPHKPIMAFPP 310
NVASHLQKYR HR+H+L +E + W R + + P + FPP
Sbjct: 196 NVASHLQKYRSHRKHLLAREAEAANWTRKRHIYGVDTGANLNGRTKNGWLAPAPTLGFPP 255
Query: 311 YHSNHLVPTG-------PVYPVWGAPSNHLAAV-QMW----APPGY----PPWQQAESWN 354
+ P P++ VWG P+ + + +W PP PP+ ++S
Sbjct: 256 PPPVAVAPPPVHHHHFRPLH-VWGHPTVDQSIMPHVWPKHLPPPSTAMPNPPFWVSDSPY 314
Query: 355 WKPY-----PGMPADAWGCPVMPLPNGPYSSFPQGASGYHNSGVDDNSYAMPQNSVDLHP 409
W P P +P A P+ P++ P +H + + + VDLHP
Sbjct: 315 WHPMHNGTTPYLPTVATRFRAPPVAGIPHALPP-----HHTMYKPNLGFGGARPPVDLHP 369
Query: 410 AEEVIDKVVKEAISKPWLPLPLGLKPPSADSVLAELSRQGISTIPP 455
++E +D + + +++PWLPLPLGL PP+ D V+ EL R G+S +PP
Sbjct: 370 SKESVDAAIGDVLTRPWLPLPLGLNPPAVDGVMTELHRHGVSEVPP 415
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 138/274 (50%), Gaps = 46/274 (16%)
Query: 224 VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKE 283
VDWTPELH++FVQAVEQLG+D+A+PSRILE+M ++ LTRHN+ASHLQKYR HR+H++ +E
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHMIARE 242
Query: 284 DDRKWPHARDQMLRNYYPHKPIMAFPPYHSNHLVPT--------------------GPVY 323
+ R Q+ Y +A P + VPT P++
Sbjct: 243 AEAASWTQRRQI---YAAGGGAVAKRPESNAWTVPTIGFPPPPPPPPSPAPIQHFARPLH 299
Query: 324 PVWGAPSNHLAAVQMWAPPGYPP-----------WQQAESWNWKPY----PGMPADAWGC 368
VWG P+ + V +W P P ++ PY +P C
Sbjct: 300 -VWGHPTMDPSRVPVWPPRHLVPRGPAPPWVPPPPPSDPAFWHHPYMRGPAHVPTQGTPC 358
Query: 369 PVMPLPNGPYSSFPQGASGYHNS-------GVDDNSYAMPQNSVDLHPAEEVIDKVVKEA 421
MP+P + + P + + Q + + P+ E ID + +
Sbjct: 359 MAMPMPAARFPAPPVPGVVPCPMYRPLTPPALASKNQQDAQLQLQVQPSSESIDAAIGDV 418
Query: 422 ISKPWLPLPLGLKPPSADSVLAELSRQGISTIPP 455
+SKPWLPLPLGLKPPS DSV+ EL RQG++ +PP
Sbjct: 419 LSKPWLPLPLGLKPPSVDSVMGELQRQGVANVPP 452
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 62/69 (89%)
Query: 215 NKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRM 274
N ++K+KVDWTPELH++FVQAVEQLG+D+A+PSRILELM +E LTRHN+ASHLQKYR
Sbjct: 209 NSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRS 268
Query: 275 HRRHILPKE 283
HR+H++ +E
Sbjct: 269 HRKHLMARE 277
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 217 ANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 276
RKK +V W+ ELH+KFV AV+QLG+D+A+P +IL+LM +EGLTR NVASHLQKYR++
Sbjct: 190 GTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLYL 249
Query: 277 RHILPKEDDRKWPHARDQMLRNYYPHKPIMAFPPYHSNHLVPTGPVYPVWGAPSNHLAAV 336
+ I + P A +Y+ + + + +P+ + +HL +
Sbjct: 250 KKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTAARQIPSSGLL-----SRSHLTKL 304
Query: 337 QMWAPPGY 344
Q PP Y
Sbjct: 305 Q---PPMY 309
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 215 NKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRM 274
+ +N KK +V W+ ELH++FV AV QLGV++A+P +ILELM V GLTR NVASHLQKYR+
Sbjct: 231 DASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRI 290
Query: 275 HRRHI 279
+ R +
Sbjct: 291 YLRRL 295
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 20/25 (80%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVVHK 38
GAV++L KP+ + L+N+WQHVV K
Sbjct: 131 GAVDYLIKPVRMEALKNIWQHVVRK 155
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 220 KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 279
KK +V W+ ELH++FV AV QLGVD+A+P +ILE+M V GLTR NVASHLQKYR++ R +
Sbjct: 215 KKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRL 274
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVVHKAFN 41
GAV++L KP+ + L+N+WQHVV K N
Sbjct: 122 GAVDYLIKPVRIEALKNIWQHVVRKKRN 149
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%)
Query: 219 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 278
+KK +V WT ELHKKFV AV QLG ++A+P +IL+LM VE LTR NVASHLQK+R++ +
Sbjct: 193 QKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKR 252
Query: 279 I 279
I
Sbjct: 253 I 253
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVVHKAFN 41
GA ++L KP+ ++L+N+WQHVV F+
Sbjct: 111 GACDYLLKPVRIEELKNIWQHVVRSRFD 138
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 50/63 (79%)
Query: 217 ANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 276
N KK +V W+ ELH++FV AV +LG+D+A+P RILELM V GL+R NVASHLQK+R++
Sbjct: 196 GNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYL 255
Query: 277 RHI 279
+ +
Sbjct: 256 KRL 258
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVVHK 38
GA ++L KP+ ++L+N+WQHVV +
Sbjct: 106 GACDYLIKPIRPEELKNIWQHVVRR 130
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 219 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 278
+KK +V WT ELH KF+ AV+ LGV++A+P +IL+LM V+ LTR NVASHLQK+R+ +
Sbjct: 181 QKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKK 240
Query: 279 ILPKEDDRKWPHARDQMLRNYYPHKPIMAFPPYHSNHLVPTG 320
+ + A D K + F YH + +P G
Sbjct: 241 VSDDAIQQANRAAIDSHFMQMNSQKGLGGF--YHHHRGIPVG 280
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 19/23 (82%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVV 36
GA ++L KP+ ++L+N+WQHVV
Sbjct: 111 GACDYLLKPVRIEELKNIWQHVV 133
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 165 TIVKEEHDPTNGSKTECNMLPLPYEKDNLKGSNCVIENPSKASGLQNSCGNKAN------ 218
T+V E+ D + C+ ++ GS CV + S+ + + G ++
Sbjct: 159 TLVPEQADVLKTKRKNCSFKSDSRTVNSTNGS-CVSTDGSRKNRKRKPNGGPSDDGESMS 217
Query: 219 --RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 276
KK K+ WT LH F+QA+ +G+D+A+P +IL M V LTR NVASHLQKYR+
Sbjct: 218 QPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFL 277
Query: 277 RHI 279
R +
Sbjct: 278 RRV 280
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 157 DKPQRPRETIVKEEHDP--TNGSKTECNMLPLPYE-KDNLKGSNCVIENPSKASGLQNSC 213
+KP P + P T + TE ++ PL E +D++ N I +
Sbjct: 144 EKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIR--------- 194
Query: 214 GNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYR 273
+ K ++ WT +LH++F+ AV LG D+A+P +IL +MKV+ LTR VASHLQKYR
Sbjct: 195 ----DLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
Query: 274 MHRRHILP 281
M + +P
Sbjct: 251 MQLKKSIP 258
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVVHK 38
GA +FL KP+ ++L N+WQH+ K
Sbjct: 105 GAFDFLLKPVRIEELSNIWQHIFRK 129
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 157 DKPQRPRETIVKEEHDP--TNGSKTECNMLPLPYE-KDNLKGSNCVIENPSKASGLQNSC 213
+KP P + P T + TE ++ PL E +D++ N I +
Sbjct: 144 EKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIR--------- 194
Query: 214 GNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYR 273
+ K ++ WT +LH++F+ AV LG D+A+P +IL +MKV+ LTR VASHLQKYR
Sbjct: 195 ----DLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
Query: 274 MHRRHILP 281
M + +P
Sbjct: 251 MQLKKSIP 258
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVVHK 38
GA +FL KP+ ++L N+WQH+ K
Sbjct: 105 GAFDFLLKPVRIEELSNIWQHIFRK 129
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 19/114 (16%)
Query: 189 EKDNLKGSNCVIENPSKASGLQNSCGNKANR---KKMKVDWTPELHKKFVQAVEQLG-VD 244
E+DNL SN G +N+C +K + KK ++ WTPELH KF AVE++G ++
Sbjct: 184 EQDNLYESN--------EEGSKNTCDHKEEKSPTKKPRMQWTPELHHKFEVAVEKMGSLE 235
Query: 245 QAIPSRILELMK----VEGLTRHNVASHLQKYRM-HRRHILPKE--DDRKWPHA 291
+A P IL+ M+ V+GLTR+NVASHLQKYR ++ P+E +D W +A
Sbjct: 236 KAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKKTCTPQEPQEDFVWGNA 289
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 11 FQLGAVEFLRKPLSEDKLRNLWQHVVHKAFNAGG 44
+ GA +FL KP+S++ + LW+HV K + G
Sbjct: 130 IKYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSG 163
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 220 KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 279
KK K+ WT L F+QA++ +G D+ +P +IL +M V LTR NVASHLQKYR+ + +
Sbjct: 224 KKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
Query: 280 LPKE-----DDRKWPHARDQMLRNYYPHKPIMAF 308
+ + DR +D M R + +P + +
Sbjct: 284 VHQGRFSMLSDR----GKDSMFRQTHIKEPYVNY 313
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 158 KPQRPRETIVKEEHDPTNGSKTECNMLPLPYEKDNLKGSNCV---IENPSKASGLQNSCG 214
K R R ++V E + G K+ + K S+C+ + + +C
Sbjct: 159 KKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRACA 218
Query: 215 NKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQ 270
+ A KK +V W ELH+ F+ AV+ LG+++A+P +IL++MKV+ ++R NVASHLQ
Sbjct: 219 SSA--KKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 223 KVDWTPELHKKFVQAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 279
+V W+ ELH KFV AV Q+G D +A P +IL+LM V LTR NVASHLQKYR++ +
Sbjct: 195 RVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL 252
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 199 VIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKV 257
++ + + SG +S ++++M+ WTPELH+ FV+AV QLG ++A P +L+L+
Sbjct: 211 MVSSEDQLSGRNSSSSVATSKQRMR--WTPELHEAFVEAVNQLGGSERATPKAVLKLLNN 268
Query: 258 EGLTRHNVASHLQKYRMHR 276
GLT ++V SHLQKYR R
Sbjct: 269 PGLTIYHVKSHLQKYRTAR 287
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 54/75 (72%), Gaps = 5/75 (6%)
Query: 206 ASGLQNSCGNKANR-KKMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILEL---MKVEGL 260
+G+QN + + +K ++ WT ELH+KF++A+E +G +++A P ++E M++EG+
Sbjct: 199 GNGIQNMEKKQGKKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGI 258
Query: 261 TRHNVASHLQKYRMH 275
TR NVASHLQK+R++
Sbjct: 259 TRSNVASHLQKHRIN 273
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVVHK 38
GA +++ KP+ E+ + N+WQH+V K
Sbjct: 128 GACDYVVKPVKEEVMANIWQHIVRK 152
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 223 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYRM 274
++ WT ELH++FV AV QLG D+A P I+ +M V+GLT +++ SHLQK+R+
Sbjct: 36 RLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 223 KVDWTPELHKKFVQAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILP 281
++ WTPELH+ FV AV+ LG +A P +L++M V+GLT +V SHLQ YR R +L
Sbjct: 25 RLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLG 84
Query: 282 K 282
K
Sbjct: 85 K 85
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 216 KANRKKMKVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 273
K + + ++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 319 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 377
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 223 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 273
++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 215 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 266
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 223 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 273
++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 221 RMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 272
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 223 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 273
++ WT LH FV AV+ LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 166 RMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYR 217
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 223 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 273
++ WT LH FV AV+ LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 107 RMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 158
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 226 WTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI---LPK 282
W E H KF+ A+ LG + P ILE+M LT V SHLQKY+ I LP+
Sbjct: 227 WNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLTHRQVGSHLQKYKAQIDQISYTLPR 286
Query: 283 EDDR 286
+ R
Sbjct: 287 NESR 290
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHVVHKAFNAG 43
GA +FL KP+ +++LRNLWQHV K ++G
Sbjct: 140 GAADFLVKPIRKNELRNLWQHVWRKQLSSG 169
>sp|O39927|POLG_HCVEU Genome polyprotein OS=Hepatitis C virus genotype 6a (isolate EUHK2)
PE=1 SV=3
Length = 3018
Score = 38.1 bits (87), Expect = 0.13, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 252 LELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWPHARDQMLRNYYPHKPIMAFPPY 311
+EL++ L +H + SH+ + + + ++ + +P Y + I
Sbjct: 2228 MELLQANLLWKHEMGSHIPRVQSENK-VVVLDSFELYPLE--------YEEREISVSVEC 2278
Query: 312 HSNHLVPTGPVYPVWGAPSNHLAAVQMWAPPGYPP 346
H PV+PVW P N+ +Q W PGY P
Sbjct: 2279 HRQPRCKFPPVFPVWARPDNNPPFIQAWQMPGYEP 2313
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 20/22 (90%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHV 35
GAV+FL KP+ +++L+NLWQHV
Sbjct: 159 GAVDFLVKPIRKNELKNLWQHV 180
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 20/22 (90%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHV 35
GAV+FL KP+ +++L+NLWQHV
Sbjct: 159 GAVDFLVKPIRKNELKNLWQHV 180
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 20/22 (90%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHV 35
GAV+FL KP+ +++L+NLWQHV
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHV 199
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 20/22 (90%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHV 35
GAV+FL KP+ +++L+NLWQHV
Sbjct: 178 GAVDFLVKPIRKNELKNLWQHV 199
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 20/22 (90%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHV 35
GAV+FL KP+ +++L+NLWQHV
Sbjct: 161 GAVDFLVKPIRKNELKNLWQHV 182
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 36.6 bits (83), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHV 35
GA ++L KPL ++LRNLWQHV
Sbjct: 147 GAADYLVKPLRRNELRNLWQHV 168
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 11 FQLGAVEFLRKPLSEDKLRNLWQHV 35
+LGA E+L KPL ++L NLW HV
Sbjct: 122 LRLGAAEYLVKPLRMNELLNLWTHV 146
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHV 35
GAV+FL KP+ +++L+ LWQHV
Sbjct: 175 GAVDFLVKPIRKNELKILWQHV 196
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 19/22 (86%)
Query: 14 GAVEFLRKPLSEDKLRNLWQHV 35
GA ++L KP+ +++L+NLWQHV
Sbjct: 134 GAADYLIKPMRKNELKNLWQHV 155
>sp|P32057|WCAI_ECOLI Putative colanic acid biosynthesis glycosyl transferase WcaI
OS=Escherichia coli (strain K12) GN=wcaI PE=4 SV=1
Length = 407
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 326 WGAPSNHLAAVQMWAPPGYPPWQQAE---SWNWKPYPGMPADAWGCPV 370
W A H V + APP YP WQ E +W +K G A W CP+
Sbjct: 27 WLAAQGHEVRV-ITAPPYYPQWQVGENYSAWRYKREEG-AATVWRCPL 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,037,871
Number of Sequences: 539616
Number of extensions: 9259431
Number of successful extensions: 18864
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 18727
Number of HSP's gapped (non-prelim): 172
length of query: 463
length of database: 191,569,459
effective HSP length: 121
effective length of query: 342
effective length of database: 126,275,923
effective search space: 43186365666
effective search space used: 43186365666
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)