Query 012452
Match_columns 463
No_of_seqs 488 out of 2967
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 09:43:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012452.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012452hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2goy_A Adenosine phosphosulfat 100.0 1E-59 3.6E-64 462.0 18.9 239 82-325 25-265 (275)
2 2oq2_A Phosphoadenosine phosph 100.0 6.3E-56 2.1E-60 432.0 19.6 229 80-321 10-250 (261)
3 2o8v_A Phosphoadenosine phosph 100.0 1.2E-54 3.9E-59 421.0 17.6 226 82-323 16-246 (252)
4 3fwk_A FMN adenylyltransferase 100.0 3.1E-44 1E-48 351.0 13.9 180 87-296 32-237 (308)
5 1zun_A Sulfate adenylyltransfe 100.0 5E-41 1.7E-45 335.9 17.2 210 83-306 24-307 (325)
6 1sur_A PAPS reductase; assimil 100.0 1.2E-38 4E-43 301.5 18.2 195 83-290 16-215 (215)
7 2wsi_A FAD synthetase; transfe 100.0 1.3E-38 4.4E-43 316.2 14.5 185 99-310 37-251 (306)
8 3zzx_A Thioredoxin; oxidoreduc 99.8 1.2E-20 4.2E-25 157.7 13.1 103 353-463 2-105 (105)
9 3h79_A Thioredoxin-like protei 99.8 4.2E-20 1.4E-24 158.7 15.4 108 350-462 14-126 (127)
10 2av4_A Thioredoxin-like protei 99.8 2.3E-19 7.9E-24 158.8 11.6 106 352-462 22-137 (160)
11 3gnj_A Thioredoxin domain prot 99.8 8.1E-19 2.8E-23 146.1 14.1 105 351-462 4-108 (111)
12 2dj1_A Protein disulfide-isome 99.8 7.1E-19 2.4E-23 153.1 14.0 105 350-462 16-122 (140)
13 2dml_A Protein disulfide-isome 99.8 9.9E-19 3.4E-23 150.2 14.5 111 346-462 11-122 (130)
14 2qsi_A Putative hydrogenase ex 99.8 2.2E-19 7.4E-24 156.3 10.1 106 350-462 14-121 (137)
15 3tco_A Thioredoxin (TRXA-1); d 99.8 1.4E-18 4.7E-23 143.8 13.3 104 351-462 4-107 (109)
16 3hxs_A Thioredoxin, TRXP; elec 99.8 1.4E-18 4.8E-23 151.5 13.7 109 349-462 20-137 (141)
17 2qgv_A Hydrogenase-1 operon pr 99.8 1.9E-19 6.6E-24 157.2 7.4 103 352-462 18-123 (140)
18 2trx_A Thioredoxin; electron t 99.8 2.3E-18 7.8E-23 142.7 13.4 105 351-462 2-106 (108)
19 3ga4_A Dolichyl-diphosphooligo 99.8 1.9E-18 6.4E-23 157.4 13.8 112 346-461 13-150 (178)
20 1x5d_A Protein disulfide-isome 99.8 2.4E-18 8.3E-23 148.0 13.2 105 351-462 7-115 (133)
21 3die_A Thioredoxin, TRX; elect 99.8 3E-18 1E-22 141.2 13.2 103 351-462 3-105 (106)
22 2i4a_A Thioredoxin; acidophIle 99.8 4.5E-18 1.5E-22 140.4 14.0 105 351-462 2-106 (107)
23 1nsw_A Thioredoxin, TRX; therm 99.8 2.8E-18 9.5E-23 141.5 12.2 102 353-462 2-103 (105)
24 1x5e_A Thioredoxin domain cont 99.8 3.8E-18 1.3E-22 146.0 13.3 102 351-462 7-108 (126)
25 3uvt_A Thioredoxin domain-cont 99.8 4.7E-18 1.6E-22 141.2 13.1 104 351-462 5-110 (111)
26 1r26_A Thioredoxin; redox-acti 99.8 4.7E-18 1.6E-22 146.2 13.4 102 351-462 19-121 (125)
27 3qfa_C Thioredoxin; protein-pr 99.8 2.4E-18 8.3E-23 145.6 11.4 104 351-462 12-115 (116)
28 3hz4_A Thioredoxin; NYSGXRC, P 99.8 3.1E-18 1.1E-22 149.8 12.4 106 350-462 5-110 (140)
29 2yzu_A Thioredoxin; redox prot 99.8 5.1E-18 1.8E-22 140.2 13.0 103 352-462 2-104 (109)
30 3p2a_A Thioredoxin 2, putative 99.8 1.1E-17 3.6E-22 147.5 15.9 105 350-462 37-141 (148)
31 1w4v_A Thioredoxin, mitochondr 99.8 6.2E-18 2.1E-22 143.5 13.4 106 350-462 12-117 (119)
32 2voc_A Thioredoxin; electron t 99.8 3.6E-18 1.2E-22 143.3 11.8 102 352-462 2-103 (112)
33 2ppt_A Thioredoxin-2; thiredox 99.8 6E-18 2.1E-22 151.1 13.8 104 351-462 47-150 (155)
34 1dby_A Chloroplast thioredoxin 99.8 6.9E-18 2.4E-22 139.6 13.1 104 352-462 2-105 (107)
35 1t00_A Thioredoxin, TRX; redox 99.8 8E-18 2.7E-22 140.5 13.3 105 351-462 5-109 (112)
36 1thx_A Thioredoxin, thioredoxi 99.8 1.1E-17 3.8E-22 139.8 14.1 105 351-462 7-111 (115)
37 2l5l_A Thioredoxin; structural 99.8 9.5E-18 3.3E-22 145.9 14.0 106 351-462 9-124 (136)
38 3f3q_A Thioredoxin-1; His TAG, 99.8 8.5E-18 2.9E-22 140.5 13.2 101 352-462 8-108 (109)
39 2pu9_C TRX-F, thioredoxin F-ty 99.8 9.9E-18 3.4E-22 140.0 13.2 104 351-462 5-109 (111)
40 3d6i_A Monothiol glutaredoxin- 99.7 9.5E-18 3.3E-22 140.2 12.6 106 352-462 1-107 (112)
41 2e0q_A Thioredoxin; electron t 99.7 1E-17 3.5E-22 137.0 12.6 101 353-462 1-101 (104)
42 2o8v_B Thioredoxin 1; disulfid 99.7 6E-18 2.1E-22 146.0 11.7 105 351-462 22-126 (128)
43 3aps_A DNAJ homolog subfamily 99.7 6.5E-18 2.2E-22 143.4 11.6 106 351-462 3-111 (122)
44 1fb6_A Thioredoxin M; electron 99.7 1.3E-17 4.6E-22 137.0 12.9 103 353-462 2-104 (105)
45 1mek_A Protein disulfide isome 99.7 2.8E-18 9.7E-23 144.3 9.0 106 351-462 7-115 (120)
46 2dj3_A Protein disulfide-isome 99.7 1.5E-18 5.3E-23 149.6 7.5 108 351-462 7-116 (133)
47 4euy_A Uncharacterized protein 99.7 1.6E-18 5.6E-23 143.5 7.3 97 357-462 7-103 (105)
48 1ep7_A Thioredoxin CH1, H-type 99.7 1.2E-17 4.1E-22 139.3 12.6 105 352-462 3-109 (112)
49 1gh2_A Thioredoxin-like protei 99.7 1.9E-17 6.5E-22 137.3 13.6 102 353-462 3-105 (107)
50 3idv_A Protein disulfide-isome 99.7 1.4E-17 4.8E-22 157.9 13.5 105 350-462 14-120 (241)
51 3qou_A Protein YBBN; thioredox 99.7 1.2E-17 4.1E-22 163.2 12.9 107 350-462 6-112 (287)
52 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.8E-17 6.2E-22 140.1 12.1 105 351-462 12-116 (121)
53 1syr_A Thioredoxin; SGPP, stru 99.7 2.2E-17 7.6E-22 138.3 12.4 102 351-462 9-110 (112)
54 1faa_A Thioredoxin F; electron 99.7 2.9E-17 9.9E-22 139.9 13.0 105 351-463 18-123 (124)
55 1xwb_A Thioredoxin; dimerizati 99.7 3.6E-17 1.2E-21 134.7 12.8 103 353-462 2-105 (106)
56 2djj_A PDI, protein disulfide- 99.7 1.3E-17 4.5E-22 141.2 9.7 105 350-462 6-115 (121)
57 3m9j_A Thioredoxin; oxidoreduc 99.7 4.3E-17 1.5E-21 134.1 12.6 101 354-462 3-104 (105)
58 3evi_A Phosducin-like protein 99.7 2E-17 6.8E-22 141.1 10.6 103 352-462 4-112 (118)
59 3apq_A DNAJ homolog subfamily 99.7 5.7E-17 1.9E-21 151.6 14.6 104 351-462 97-200 (210)
60 2vim_A Thioredoxin, TRX; thior 99.7 6.4E-17 2.2E-21 132.7 13.1 102 353-462 1-103 (104)
61 3gix_A Thioredoxin-like protei 99.7 3E-17 1E-21 145.6 11.7 103 356-462 9-119 (149)
62 2xc2_A Thioredoxinn; oxidoredu 99.7 5.4E-17 1.9E-21 136.9 12.7 102 352-462 14-116 (117)
63 2vlu_A Thioredoxin, thioredoxi 99.7 7.4E-17 2.5E-21 136.8 13.1 105 351-462 13-118 (122)
64 3ed3_A Protein disulfide-isome 99.7 7.4E-17 2.5E-21 159.4 15.2 106 351-462 17-140 (298)
65 2dj0_A Thioredoxin-related tra 99.7 3.7E-18 1.3E-22 148.5 4.8 104 351-459 7-116 (137)
66 1xfl_A Thioredoxin H1; AT3G510 99.7 7.9E-17 2.7E-21 138.0 12.8 105 351-462 16-122 (124)
67 3us3_A Calsequestrin-1; calciu 99.7 6.4E-17 2.2E-21 164.4 14.3 106 349-462 11-122 (367)
68 3ul3_B Thioredoxin, thioredoxi 99.7 1.8E-17 6.3E-22 142.4 8.7 88 369-461 40-127 (128)
69 1v98_A Thioredoxin; oxidoreduc 99.7 6.7E-17 2.3E-21 141.0 12.2 104 351-462 33-136 (140)
70 2r2j_A Thioredoxin domain-cont 99.7 4.6E-17 1.6E-21 166.2 12.4 106 351-462 5-115 (382)
71 2oe3_A Thioredoxin-3; electron 99.7 7.3E-17 2.5E-21 136.2 11.4 101 352-462 13-114 (114)
72 2wz9_A Glutaredoxin-3; protein 99.7 8.7E-17 3E-21 142.8 12.5 104 351-462 12-116 (153)
73 1oaz_A Thioredoxin 1; immune s 99.7 1.5E-17 5.2E-22 142.5 7.1 105 351-462 3-121 (123)
74 3dxb_A Thioredoxin N-terminall 99.7 8E-17 2.7E-21 152.1 12.7 106 350-462 11-116 (222)
75 2l6c_A Thioredoxin; oxidoreduc 99.7 5.9E-17 2E-21 135.6 10.1 101 352-462 4-104 (110)
76 2b5e_A Protein disulfide-isome 99.7 1.7E-16 5.8E-21 167.6 16.1 106 351-462 14-120 (504)
77 1qgv_A Spliceosomal protein U5 99.7 1.2E-16 4.1E-21 140.5 12.2 102 357-462 10-119 (142)
78 2j23_A Thioredoxin; immune pro 99.7 5.8E-17 2E-21 138.0 9.7 104 351-462 15-119 (121)
79 1sji_A Calsequestrin 2, calseq 99.7 8E-17 2.7E-21 162.4 12.0 104 350-462 10-120 (350)
80 1zma_A Bacterocin transport ac 99.7 4.9E-17 1.7E-21 137.5 8.6 101 351-460 12-117 (118)
81 2l57_A Uncharacterized protein 99.7 7E-17 2.4E-21 138.0 9.6 106 352-462 5-115 (126)
82 1ti3_A Thioredoxin H, PTTRXH1; 99.7 1.2E-16 4E-21 133.3 10.7 105 351-462 4-110 (113)
83 2vm1_A Thioredoxin, thioredoxi 99.7 2.5E-16 8.6E-21 132.3 12.8 105 351-462 6-112 (118)
84 3cxg_A Putative thioredoxin; m 99.7 5.9E-17 2E-21 140.6 8.9 107 348-462 17-127 (133)
85 3emx_A Thioredoxin; structural 99.7 5.6E-17 1.9E-21 141.0 8.3 101 350-462 15-124 (135)
86 3d22_A TRXH4, thioredoxin H-ty 99.7 2.2E-16 7.6E-21 137.2 12.0 105 351-462 24-130 (139)
87 3q6o_A Sulfhydryl oxidase 1; p 99.7 5.2E-16 1.8E-20 148.4 15.4 106 351-462 12-125 (244)
88 2dbc_A PDCL2, unnamed protein 99.7 2.3E-16 7.8E-21 137.3 11.5 104 351-462 10-119 (135)
89 2f51_A Thioredoxin; electron t 99.7 4.1E-16 1.4E-20 132.3 12.8 103 351-462 3-111 (118)
90 3idv_A Protein disulfide-isome 99.7 3.5E-16 1.2E-20 148.2 12.6 103 352-462 131-235 (241)
91 3f8u_A Protein disulfide-isome 99.7 2.9E-16 9.9E-21 164.7 12.9 106 352-462 2-107 (481)
92 2es7_A Q8ZP25_salty, putative 99.7 8.6E-17 2.9E-21 141.7 6.5 102 352-462 18-123 (142)
93 3uem_A Protein disulfide-isome 99.6 8.4E-16 2.9E-20 155.1 14.0 107 349-462 247-355 (361)
94 2c0g_A ERP29 homolog, windbeut 99.6 1.8E-15 6E-20 145.3 13.6 101 351-462 16-130 (248)
95 3fk8_A Disulphide isomerase; A 99.6 1.4E-15 4.8E-20 131.1 10.9 100 359-462 16-131 (133)
96 1a8l_A Protein disulfide oxido 99.6 2.3E-15 7.8E-20 141.6 12.4 103 353-462 118-224 (226)
97 2yj7_A LPBCA thioredoxin; oxid 99.4 3.9E-17 1.3E-21 133.9 0.0 104 352-462 2-105 (106)
98 2qc7_A ERP31, ERP28, endoplasm 99.6 5.7E-15 2E-19 141.1 14.3 102 351-462 5-117 (240)
99 2kuc_A Putative disulphide-iso 99.6 1.4E-15 4.9E-20 130.3 8.9 107 352-462 7-119 (130)
100 1wou_A Thioredoxin -related pr 99.6 2E-15 7E-20 128.9 9.7 103 352-461 6-122 (123)
101 2fwh_A Thiol:disulfide interch 99.6 2.6E-15 9E-20 130.1 10.5 101 357-462 18-126 (134)
102 2trc_P Phosducin, MEKA, PP33; 99.6 1.1E-15 3.7E-20 144.2 7.7 105 351-462 99-211 (217)
103 3t58_A Sulfhydryl oxidase 1; o 99.6 9.4E-15 3.2E-19 154.7 14.6 111 347-462 7-125 (519)
104 2djk_A PDI, protein disulfide- 99.6 6.7E-15 2.3E-19 127.6 11.1 103 351-462 6-113 (133)
105 3f8u_A Protein disulfide-isome 99.6 9.4E-15 3.2E-19 153.2 14.3 107 350-462 351-459 (481)
106 3apo_A DNAJ homolog subfamily 99.6 5.1E-15 1.8E-19 164.3 11.8 104 351-462 116-219 (780)
107 1a0r_P Phosducin, MEKA, PP33; 99.6 3.8E-15 1.3E-19 142.7 9.3 106 351-462 112-224 (245)
108 3iv4_A Putative oxidoreductase 99.6 5E-15 1.7E-19 123.9 8.7 100 351-459 6-111 (112)
109 1wmj_A Thioredoxin H-type; str 99.6 4.3E-16 1.5E-20 133.3 1.7 105 351-462 14-120 (130)
110 1fo5_A Thioredoxin; disulfide 99.5 5.9E-15 2E-19 116.5 7.1 82 372-462 3-84 (85)
111 2b5e_A Protein disulfide-isome 99.5 2.5E-14 8.7E-19 150.9 13.9 106 350-462 357-465 (504)
112 3qcp_A QSOX from trypanosoma b 99.5 1.4E-15 4.8E-20 157.8 4.0 95 350-447 22-124 (470)
113 1nho_A Probable thioredoxin; b 99.5 6.5E-15 2.2E-19 116.3 6.7 81 373-462 3-83 (85)
114 3f9u_A Putative exported cytoc 99.5 9.8E-15 3.4E-19 131.7 8.7 106 352-462 27-164 (172)
115 2ywm_A Glutaredoxin-like prote 99.5 5.6E-14 1.9E-18 132.5 11.2 98 353-462 120-218 (229)
116 2ju5_A Thioredoxin disulfide i 99.5 1.3E-13 4.4E-18 122.5 10.7 88 370-462 46-150 (154)
117 3or5_A Thiol:disulfide interch 99.5 2.1E-13 7.2E-18 121.0 12.0 90 370-462 33-149 (165)
118 2lst_A Thioredoxin; structural 99.2 3.9E-15 1.3E-19 127.6 0.0 89 370-462 18-114 (130)
119 3raz_A Thioredoxin-related pro 99.5 2.7E-13 9.3E-18 119.1 11.7 91 370-462 23-138 (151)
120 2b5x_A YKUV protein, TRXY; thi 99.5 4.2E-13 1.4E-17 116.4 12.7 102 354-462 15-143 (148)
121 1lu4_A Soluble secreted antige 99.5 2.4E-13 8.3E-18 116.4 10.8 87 370-462 23-134 (136)
122 1z6n_A Hypothetical protein PA 99.5 6.2E-14 2.1E-18 126.7 7.1 82 353-440 38-122 (167)
123 3apo_A DNAJ homolog subfamily 99.5 4.1E-13 1.4E-17 149.0 15.1 109 351-462 543-654 (780)
124 3kp8_A Vkorc1/thioredoxin doma 99.4 4E-14 1.4E-18 118.1 4.7 75 370-460 11-91 (106)
125 1sen_A Thioredoxin-like protei 99.4 4.2E-14 1.4E-18 127.2 5.0 97 359-462 37-146 (164)
126 2hls_A Protein disulfide oxido 99.4 4.4E-13 1.5E-17 128.3 12.4 96 357-462 126-224 (243)
127 1zzo_A RV1677; thioredoxin fol 99.4 4E-13 1.4E-17 114.6 10.7 87 370-462 24-133 (136)
128 3dml_A Putative uncharacterize 99.4 8E-14 2.7E-18 117.9 5.5 87 370-462 17-108 (116)
129 2f9s_A Thiol-disulfide oxidore 99.4 4E-13 1.4E-17 117.8 10.2 91 370-462 25-136 (151)
130 1a8l_A Protein disulfide oxido 99.4 3.6E-13 1.2E-17 126.5 9.8 100 358-462 9-111 (226)
131 3erw_A Sporulation thiol-disul 99.4 5.2E-13 1.8E-17 115.4 9.9 88 370-460 33-145 (145)
132 2h30_A Thioredoxin, peptide me 99.4 2.5E-13 8.6E-18 120.6 8.1 105 352-462 22-154 (164)
133 3ph9_A Anterior gradient prote 99.4 7.4E-14 2.5E-18 124.1 4.4 67 370-440 43-113 (151)
134 1ilo_A Conserved hypothetical 99.4 4.9E-13 1.7E-17 103.6 8.6 74 374-459 2-76 (77)
135 3lor_A Thiol-disulfide isomera 99.4 1.1E-12 3.9E-17 115.8 12.1 90 370-462 29-153 (160)
136 3ira_A Conserved protein; meth 99.4 2.9E-13 9.8E-18 122.9 7.7 80 354-439 25-116 (173)
137 3hdc_A Thioredoxin family prot 99.4 1.3E-12 4.3E-17 115.8 11.8 91 370-462 40-150 (158)
138 3hcz_A Possible thiol-disulfid 99.4 4.8E-13 1.7E-17 116.2 8.6 89 370-461 30-143 (148)
139 2ywm_A Glutaredoxin-like prote 99.4 9.9E-13 3.4E-17 123.9 11.0 99 359-462 9-113 (229)
140 4evm_A Thioredoxin family prot 99.4 1E-12 3.5E-17 111.9 9.6 90 370-463 21-138 (138)
141 3fkf_A Thiol-disulfide oxidore 99.4 1.3E-12 4.6E-17 113.4 10.5 88 370-462 32-144 (148)
142 3eur_A Uncharacterized protein 99.4 8.9E-13 3E-17 114.6 9.3 86 370-461 30-142 (142)
143 2l5o_A Putative thioredoxin; s 99.4 1.6E-12 5.5E-17 113.9 10.5 90 370-462 27-139 (153)
144 3eyt_A Uncharacterized protein 99.4 2.1E-12 7.3E-17 113.9 11.3 90 370-462 27-150 (158)
145 2lja_A Putative thiol-disulfid 99.4 1.6E-12 5.6E-17 113.8 10.4 90 370-462 29-141 (152)
146 3ewl_A Uncharacterized conserv 99.4 1.2E-12 4.2E-17 113.3 9.4 87 370-462 26-139 (142)
147 2ywb_A GMP synthase [glutamine 99.4 1.8E-12 6.1E-17 136.8 11.7 177 102-285 199-383 (503)
148 3gl3_A Putative thiol:disulfid 99.4 3.2E-12 1.1E-16 111.9 10.9 91 370-462 27-140 (152)
149 2lrn_A Thiol:disulfide interch 99.4 2.1E-12 7.2E-17 113.5 9.6 88 370-462 28-139 (152)
150 3lwa_A Secreted thiol-disulfid 99.3 4.6E-12 1.6E-16 115.0 11.2 90 370-462 58-179 (183)
151 3ia1_A THIO-disulfide isomeras 99.3 4.6E-12 1.6E-16 111.2 9.9 85 372-462 31-142 (154)
152 3kcm_A Thioredoxin family prot 99.3 4.5E-12 1.6E-16 111.1 9.8 92 370-462 27-141 (154)
153 2lrt_A Uncharacterized protein 99.3 1E-11 3.6E-16 109.5 11.9 85 370-457 34-141 (152)
154 2b1k_A Thiol:disulfide interch 99.3 3.6E-12 1.2E-16 113.9 8.4 86 370-462 50-158 (168)
155 2dpl_A GMP synthetase, GMP syn 99.3 1E-11 3.6E-16 122.9 12.4 164 112-284 21-189 (308)
156 2fgx_A Putative thioredoxin; N 99.3 4.1E-12 1.4E-16 105.9 8.0 78 372-459 29-106 (107)
157 3fw2_A Thiol-disulfide oxidore 99.3 1.5E-11 5.2E-16 107.7 12.0 88 370-462 32-146 (150)
158 1kng_A Thiol:disulfide interch 99.3 5.5E-12 1.9E-16 110.7 8.7 88 370-462 41-150 (156)
159 1wy5_A TILS, hypothetical UPF0 99.3 3E-11 1E-15 120.2 15.0 148 112-277 25-190 (317)
160 4fo5_A Thioredoxin-like protei 99.3 6.4E-12 2.2E-16 109.2 8.4 88 370-462 31-143 (143)
161 1i5g_A Tryparedoxin II; electr 99.3 8.9E-12 3.1E-16 108.3 9.3 69 370-439 27-121 (144)
162 3ha9_A Uncharacterized thiored 99.3 2.1E-11 7.3E-16 108.4 11.3 87 370-462 36-162 (165)
163 1ttz_A Conserved hypothetical 99.3 7E-12 2.4E-16 100.7 6.9 73 375-462 3-75 (87)
164 3uem_A Protein disulfide-isome 99.3 2.3E-11 8E-16 122.4 12.0 106 351-462 117-228 (361)
165 1o8x_A Tryparedoxin, TRYX, TXN 99.2 2E-11 6.9E-16 106.4 9.7 69 370-439 27-121 (146)
166 2ywi_A Hypothetical conserved 99.2 2.2E-11 7.6E-16 111.5 10.2 90 370-462 44-172 (196)
167 1o73_A Tryparedoxin; electron 99.2 1.9E-11 6.6E-16 105.9 9.3 69 370-439 27-121 (144)
168 2hyx_A Protein DIPZ; thioredox 99.2 3.2E-11 1.1E-15 121.5 11.1 90 370-462 81-197 (352)
169 3kh7_A Thiol:disulfide interch 99.2 2.9E-11 9.8E-16 109.5 9.2 87 370-462 57-165 (176)
170 1jfu_A Thiol:disulfide interch 99.2 3E-11 1E-15 109.7 9.3 92 370-462 59-178 (186)
171 3s9f_A Tryparedoxin; thioredox 99.2 8.8E-11 3E-15 105.2 10.7 68 370-438 47-138 (165)
172 2cvb_A Probable thiol-disulfid 99.2 4.7E-11 1.6E-15 108.7 8.6 88 370-462 32-157 (188)
173 2dlx_A UBX domain-containing p 99.2 1.1E-10 3.8E-15 103.7 10.7 116 342-462 13-134 (153)
174 2ls5_A Uncharacterized protein 98.8 3.3E-12 1.1E-16 113.0 0.0 89 370-462 32-146 (159)
175 3u5r_E Uncharacterized protein 99.1 1.2E-10 4E-15 109.4 9.8 89 370-462 57-185 (218)
176 2lus_A Thioredoxion; CR-Trp16, 98.7 4.6E-12 1.6E-16 109.6 0.0 69 370-439 24-120 (143)
177 3drn_A Peroxiredoxin, bacterio 99.1 1.5E-10 5.1E-15 102.9 9.7 91 370-462 27-147 (161)
178 2hls_A Protein disulfide oxido 99.1 1.7E-10 5.8E-15 110.3 9.9 93 359-461 15-114 (243)
179 3bl5_A Queuosine biosynthesis 99.1 1.8E-10 6.2E-15 107.8 9.6 176 112-294 4-201 (219)
180 3kp9_A Vkorc1/thioredoxin doma 99.1 2.6E-11 8.8E-16 118.6 2.5 81 359-460 190-276 (291)
181 2v1m_A Glutathione peroxidase; 99.1 3E-10 1E-14 100.9 9.0 91 370-462 30-165 (169)
182 2vup_A Glutathione peroxidase- 99.1 4.2E-10 1.4E-14 103.0 10.0 92 370-462 47-183 (190)
183 3k32_A Uncharacterized protein 99.1 1.2E-10 4.1E-15 108.4 6.5 144 112-275 7-156 (203)
184 2p5q_A Glutathione peroxidase 99.1 3.1E-10 1.1E-14 100.9 8.6 91 370-462 31-166 (170)
185 3dwv_A Glutathione peroxidase- 99.0 5.2E-10 1.8E-14 102.2 9.6 92 370-462 45-181 (187)
186 2rli_A SCO2 protein homolog, m 99.0 7.4E-10 2.5E-14 98.7 10.3 91 370-462 25-162 (171)
187 1kor_A Argininosuccinate synth 99.0 3E-10 1E-14 116.1 8.4 148 113-277 2-166 (400)
188 2ggt_A SCO1 protein homolog, m 99.0 6.7E-10 2.3E-14 98.2 9.5 91 370-462 22-159 (164)
189 3cmi_A Peroxiredoxin HYR1; thi 99.0 4E-10 1.4E-14 101.1 7.8 91 370-462 31-166 (171)
190 1xvw_A Hypothetical protein RV 99.0 6.6E-10 2.3E-14 98.1 9.0 92 370-463 34-159 (160)
191 2p31_A CL683, glutathione pero 99.0 2.3E-10 7.9E-15 103.9 5.4 91 370-462 48-179 (181)
192 1hyu_A AHPF, alkyl hydroperoxi 99.0 1.3E-09 4.5E-14 115.5 11.8 96 354-461 102-197 (521)
193 2obi_A PHGPX, GPX-4, phospholi 99.0 6.2E-10 2.1E-14 101.1 7.7 91 370-462 46-182 (183)
194 1wjk_A C330018D20RIK protein; 99.0 7.2E-10 2.5E-14 91.1 7.3 79 370-462 14-94 (100)
195 2bmx_A Alkyl hydroperoxidase C 99.0 9.1E-10 3.1E-14 101.1 8.7 92 370-462 44-168 (195)
196 1ni5_A Putative cell cycle pro 99.0 2.3E-09 7.9E-14 111.0 11.9 156 104-277 7-177 (433)
197 3a2k_A TRNA(Ile)-lysidine synt 99.0 4E-09 1.4E-13 110.2 13.8 152 112-277 19-188 (464)
198 2k6v_A Putative cytochrome C o 99.0 5.6E-10 1.9E-14 99.5 6.1 90 370-462 34-171 (172)
199 3kij_A Probable glutathione pe 99.0 1.9E-09 6.4E-14 97.6 9.6 45 370-414 37-81 (180)
200 1we0_A Alkyl hydroperoxide red 99.0 7.7E-10 2.6E-14 100.8 7.0 92 370-462 30-155 (187)
201 2k8s_A Thioredoxin; dimer, str 99.0 1.2E-10 4.1E-15 91.3 1.4 61 374-439 3-64 (80)
202 1zof_A Alkyl hydroperoxide-red 99.0 6.3E-10 2.2E-14 102.4 6.5 92 370-462 32-159 (198)
203 2f8a_A Glutathione peroxidase 98.9 2.1E-09 7.1E-14 100.2 8.8 44 370-413 46-89 (208)
204 1qmv_A Human thioredoxin perox 98.9 2.5E-09 8.6E-14 98.3 9.1 92 370-462 33-161 (197)
205 2pg3_A Queuosine biosynthesis 98.9 5.8E-09 2E-13 98.7 11.9 181 112-294 3-204 (232)
206 1ego_A Glutaredoxin; electron 98.9 2.7E-09 9.3E-14 84.0 7.6 74 375-461 3-81 (85)
207 2e7p_A Glutaredoxin; thioredox 98.9 7.5E-10 2.6E-14 92.6 3.9 89 359-462 11-106 (116)
208 2gs3_A PHGPX, GPX-4, phospholi 98.9 2E-09 6.7E-14 98.0 7.0 91 370-462 48-184 (185)
209 1uul_A Tryparedoxin peroxidase 98.8 6.2E-09 2.1E-13 96.1 9.0 92 370-462 35-163 (202)
210 2hma_A Probable tRNA (5-methyl 98.8 1.1E-08 3.9E-13 103.7 11.7 159 112-275 10-193 (376)
211 3gkn_A Bacterioferritin comigr 98.8 1.4E-08 4.7E-13 89.9 10.5 92 370-462 34-160 (163)
212 1zye_A Thioredoxin-dependent p 98.8 6.9E-09 2.4E-13 97.4 8.8 92 370-462 55-183 (220)
213 2h01_A 2-Cys peroxiredoxin; th 98.8 4.7E-09 1.6E-13 96.0 7.4 92 370-462 30-157 (192)
214 2jsy_A Probable thiol peroxida 98.8 1.8E-08 6.3E-13 89.5 11.0 90 370-462 43-165 (167)
215 3ztl_A Thioredoxin peroxidase; 98.8 1.3E-08 4.4E-13 95.7 9.2 92 370-462 68-196 (222)
216 2i81_A 2-Cys peroxiredoxin; st 98.8 1.2E-08 4E-13 95.4 8.7 92 370-462 51-178 (213)
217 1xng_A NH(3)-dependent NAD(+) 98.8 2.6E-08 8.8E-13 96.5 11.3 155 101-275 14-175 (268)
218 4f9z_D Endoplasmic reticulum r 98.8 8.9E-08 3E-12 90.1 14.7 106 351-462 113-223 (227)
219 1xzo_A BSSCO, hypothetical pro 98.8 1.5E-08 5E-13 90.4 8.4 92 370-462 32-170 (174)
220 3p52_A NH(3)-dependent NAD(+) 98.8 2.1E-08 7.1E-13 96.1 9.5 156 100-274 14-175 (249)
221 3fiu_A NH(3)-dependent NAD(+) 98.7 5.8E-08 2E-12 93.0 11.5 157 101-274 18-184 (249)
222 2e18_A NH(3)-dependent NAD(+) 98.7 4.2E-08 1.4E-12 94.4 10.1 147 112-279 23-176 (257)
223 3tqi_A GMP synthase [glutamine 98.7 2.9E-08 9.8E-13 105.2 8.1 167 112-284 231-406 (527)
224 2der_A TRNA-specific 2-thiouri 98.7 3.5E-08 1.2E-12 100.2 8.4 160 111-275 17-201 (380)
225 2i3y_A Epididymal secretory gl 98.7 7.2E-08 2.5E-12 90.3 10.0 43 370-413 55-97 (215)
226 2b7k_A SCO1 protein; metalloch 98.7 7.8E-08 2.7E-12 88.6 9.9 89 370-460 40-175 (200)
227 1xvq_A Thiol peroxidase; thior 98.7 2.7E-08 9.1E-13 89.7 6.5 72 370-445 43-145 (175)
228 3gyk_A 27KDA outer membrane pr 98.6 7E-08 2.4E-12 86.6 9.1 82 370-462 21-171 (175)
229 1eej_A Thiol:disulfide interch 98.6 3.8E-08 1.3E-12 92.1 7.3 81 370-462 85-209 (216)
230 4g2e_A Peroxiredoxin; redox pr 98.6 2E-08 6.8E-13 89.0 4.3 92 370-462 29-156 (157)
231 3ixr_A Bacterioferritin comigr 98.6 9.3E-08 3.2E-12 86.5 8.8 107 352-462 35-176 (179)
232 2a4v_A Peroxiredoxin DOT5; yea 98.6 6.5E-08 2.2E-12 85.4 7.4 66 371-439 35-128 (159)
233 1t3b_A Thiol:disulfide interch 98.6 8.6E-08 2.9E-12 89.4 8.1 82 370-463 85-210 (211)
234 1gpm_A GMP synthetase, XMP ami 98.6 1.3E-07 4.6E-12 100.0 10.4 165 112-283 228-403 (525)
235 2c0d_A Thioredoxin peroxidase 98.6 1.2E-07 4.1E-12 89.1 8.3 92 370-462 55-182 (221)
236 1h75_A Glutaredoxin-like prote 98.5 1E-07 3.4E-12 74.2 5.7 71 375-461 3-75 (81)
237 2r37_A Glutathione peroxidase 98.5 3.3E-07 1.1E-11 85.2 10.1 43 370-413 37-79 (207)
238 3a2v_A Probable peroxiredoxin; 98.5 1.4E-07 4.7E-12 90.4 7.6 92 370-462 32-160 (249)
239 3hd5_A Thiol:disulfide interch 98.5 3E-07 1E-11 84.1 9.3 43 370-413 24-66 (195)
240 2pn8_A Peroxiredoxin-4; thiore 98.5 2.6E-07 9E-12 86.0 8.9 92 370-462 47-175 (211)
241 1r7h_A NRDH-redoxin; thioredox 98.5 2.3E-07 8E-12 70.7 7.1 69 375-460 3-74 (75)
242 2l4c_A Endoplasmic reticulum r 98.5 1.3E-06 4.4E-11 74.5 11.9 96 352-461 22-121 (124)
243 3me7_A Putative uncharacterize 98.5 3.5E-07 1.2E-11 82.0 8.8 92 370-462 27-160 (170)
244 1n8j_A AHPC, alkyl hydroperoxi 98.5 4.5E-07 1.5E-11 82.5 9.4 92 370-462 29-154 (186)
245 4gqc_A Thiol peroxidase, perox 98.4 9.5E-08 3.3E-12 85.4 4.1 98 361-462 26-158 (164)
246 1psq_A Probable thiol peroxida 98.4 8.5E-07 2.9E-11 78.6 9.5 90 370-462 41-163 (163)
247 3h93_A Thiol:disulfide interch 98.4 4.6E-07 1.6E-11 82.6 7.8 42 370-412 24-65 (192)
248 3qpm_A Peroxiredoxin; oxidored 98.4 7.9E-07 2.7E-11 84.5 9.5 92 370-462 76-204 (240)
249 2c5s_A THII, probable thiamine 98.4 7.5E-07 2.6E-11 91.5 9.5 144 113-274 189-344 (413)
250 1v58_A Thiol:disulfide interch 98.4 5.6E-07 1.9E-11 85.6 7.9 86 370-462 96-231 (241)
251 4f9z_D Endoplasmic reticulum r 98.3 1.5E-06 5.1E-11 81.6 8.9 96 352-461 10-109 (227)
252 3p7x_A Probable thiol peroxida 98.3 1.6E-06 5.6E-11 77.0 8.2 89 370-462 45-166 (166)
253 1k92_A Argininosuccinate synth 98.3 6.4E-07 2.2E-11 92.3 6.1 163 112-288 11-195 (455)
254 2nz2_A Argininosuccinate synth 98.3 8.2E-07 2.8E-11 90.9 6.6 147 112-276 6-173 (413)
255 1q98_A Thiol peroxidase, TPX; 98.3 1.1E-06 3.7E-11 78.1 6.5 73 370-445 42-146 (165)
256 3tjj_A Peroxiredoxin-4; thiore 98.2 1.2E-06 4.2E-11 84.0 7.0 92 370-462 90-218 (254)
257 1nm3_A Protein HI0572; hybrid, 98.2 2.9E-06 9.8E-11 80.3 8.8 90 370-461 32-164 (241)
258 4hde_A SCO1/SENC family lipopr 98.2 8.9E-06 3E-10 72.8 11.5 92 370-462 31-168 (170)
259 1prx_A HORF6; peroxiredoxin, h 98.2 7.5E-06 2.6E-10 76.9 11.4 89 373-462 34-167 (224)
260 1kte_A Thioltransferase; redox 98.2 9.1E-07 3.1E-11 72.4 4.5 69 359-439 3-77 (105)
261 3uma_A Hypothetical peroxiredo 98.2 3E-06 1E-10 77.2 8.3 91 370-461 55-183 (184)
262 2yzh_A Probable thiol peroxida 98.2 3.6E-06 1.2E-10 75.0 8.7 91 370-462 46-170 (171)
263 1tp9_A Peroxiredoxin, PRX D (t 98.2 2.8E-06 9.7E-11 75.3 7.4 69 370-439 34-138 (162)
264 3mng_A Peroxiredoxin-5, mitoch 98.2 3.1E-06 1.1E-10 76.3 7.7 92 370-462 42-173 (173)
265 3zrd_A Thiol peroxidase; oxido 98.1 2.7E-06 9.3E-11 78.4 6.6 68 370-440 77-176 (200)
266 2hze_A Glutaredoxin-1; thiored 98.1 1.8E-06 6.3E-11 72.1 4.6 58 372-439 18-84 (114)
267 1sji_A Calsequestrin 2, calseq 98.1 2.9E-05 1E-09 77.5 14.1 109 351-462 226-344 (350)
268 2v2g_A Peroxiredoxin 6; oxidor 98.1 8.5E-06 2.9E-10 77.1 9.3 90 372-462 30-163 (233)
269 3uow_A GMP synthetase; structu 98.1 1.3E-05 4.4E-10 85.3 11.5 164 112-281 256-432 (556)
270 1xcc_A 1-Cys peroxiredoxin; un 98.0 6.7E-06 2.3E-10 77.0 7.3 89 373-462 34-164 (220)
271 2klx_A Glutaredoxin; thioredox 98.0 6.7E-06 2.3E-10 65.1 6.2 55 374-439 7-64 (89)
272 2pwj_A Mitochondrial peroxired 98.0 4.6E-06 1.6E-10 74.8 5.1 43 372-414 45-89 (171)
273 2wfc_A Peroxiredoxin 5, PRDX5; 98.0 8.5E-06 2.9E-10 72.8 6.8 45 370-414 30-77 (167)
274 1un2_A DSBA, thiol-disulfide i 98.0 2.2E-06 7.5E-11 79.0 2.9 44 371-415 113-159 (197)
275 2znm_A Thiol:disulfide interch 98.0 2.2E-05 7.5E-10 71.3 9.5 42 370-412 21-62 (195)
276 2cq9_A GLRX2 protein, glutared 98.0 1E-05 3.4E-10 69.3 6.3 67 358-439 17-89 (130)
277 2yan_A Glutaredoxin-3; oxidore 97.9 1.8E-05 6.2E-10 64.9 7.3 65 359-439 8-81 (105)
278 2lqo_A Putative glutaredoxin R 97.9 2.2E-05 7.5E-10 63.2 7.4 73 374-462 5-82 (92)
279 3qmx_A Glutaredoxin A, glutare 97.9 1.8E-05 6E-10 64.5 6.9 60 370-439 13-76 (99)
280 3us3_A Calsequestrin-1; calciu 97.9 5.3E-05 1.8E-09 76.3 11.7 110 351-462 228-346 (367)
281 1vl2_A Argininosuccinate synth 97.9 2.3E-05 8E-10 79.8 9.1 148 109-276 12-182 (421)
282 3c1r_A Glutaredoxin-1; oxidize 97.9 7E-06 2.4E-10 69.1 4.4 69 359-439 16-91 (118)
283 2ht9_A Glutaredoxin-2; thiored 97.9 1.4E-05 4.7E-10 70.0 6.3 67 358-439 39-111 (146)
284 3bj5_A Protein disulfide-isome 97.9 0.00013 4.6E-09 63.7 12.2 106 351-462 14-125 (147)
285 2vxo_A GMP synthase [glutamine 97.9 4.2E-05 1.4E-09 83.2 10.8 170 112-283 241-442 (697)
286 3ic4_A Glutaredoxin (GRX-1); s 97.9 2.1E-05 7.3E-10 62.4 6.1 71 374-460 13-91 (92)
287 2rem_A Disulfide oxidoreductas 97.8 0.00012 4E-09 66.2 11.5 41 371-412 25-65 (193)
288 1z6m_A Conserved hypothetical 97.8 6.4E-05 2.2E-09 67.0 9.3 42 370-412 26-69 (175)
289 2h8l_A Protein disulfide-isome 97.8 0.00011 3.8E-09 69.8 11.4 97 351-461 6-110 (252)
290 3nzn_A Glutaredoxin; structura 97.8 5.7E-05 2E-09 61.6 7.9 76 371-460 20-102 (103)
291 3gv1_A Disulfide interchange p 97.8 2.3E-05 8E-10 68.6 5.8 80 370-462 13-137 (147)
292 2ec4_A FAS-associated factor 1 97.8 0.00019 6.6E-09 64.8 11.6 103 357-461 36-165 (178)
293 1fov_A Glutaredoxin 3, GRX3; a 97.8 4.8E-05 1.6E-09 58.7 6.5 69 375-461 3-74 (82)
294 4dvc_A Thiol:disulfide interch 97.7 8E-05 2.7E-09 66.5 8.7 41 370-411 20-60 (184)
295 3rhb_A ATGRXC5, glutaredoxin-C 97.7 3.2E-05 1.1E-09 64.1 5.4 66 359-439 10-82 (113)
296 3q4g_A NH(3)-dependent NAD(+) 97.7 4.8E-05 1.6E-09 73.7 7.4 159 100-274 28-211 (279)
297 2khp_A Glutaredoxin; thioredox 97.7 4.5E-05 1.5E-09 60.5 5.9 55 374-439 7-65 (92)
298 3n05_A NH(3)-dependent NAD(+) 97.7 5.9E-05 2E-09 80.9 8.4 153 101-272 315-473 (590)
299 3ec3_A Protein disulfide-isome 97.7 0.00015 5.3E-09 68.8 10.4 98 351-461 6-112 (250)
300 3dpi_A NAD+ synthetase; ssgcid 97.7 8.5E-05 2.9E-09 72.1 8.1 160 100-274 34-211 (285)
301 2r2j_A Thioredoxin domain-cont 97.7 0.00028 9.6E-09 71.3 12.3 104 351-462 219-327 (382)
302 1kqp_A NAD+ synthase, NH(3)-de 97.6 9.4E-05 3.2E-09 71.5 8.1 157 100-275 26-200 (271)
303 3msz_A Glutaredoxin 1; alpha-b 97.6 0.0002 6.8E-09 56.0 7.6 74 373-462 4-85 (89)
304 3keb_A Probable thiol peroxida 97.5 0.00026 8.9E-09 66.3 8.7 87 370-462 47-174 (224)
305 3hz8_A Thiol:disulfide interch 97.5 0.00013 4.4E-09 66.6 5.8 43 370-413 23-65 (193)
306 3sbc_A Peroxiredoxin TSA1; alp 97.5 0.00038 1.3E-08 64.8 9.0 93 370-463 51-180 (216)
307 3ctg_A Glutaredoxin-2; reduced 97.4 0.00012 4.2E-09 62.5 4.8 70 358-439 27-103 (129)
308 1wik_A Thioredoxin-like protei 97.4 0.00028 9.7E-09 58.1 6.6 66 359-439 6-79 (109)
309 4f82_A Thioredoxin reductase; 97.4 0.00042 1.4E-08 62.5 7.9 52 360-414 40-93 (176)
310 1wxi_A NH(3)-dependent NAD(+) 97.4 0.00078 2.7E-08 65.1 10.3 156 100-274 27-202 (275)
311 3h8q_A Thioredoxin reductase 3 97.4 0.0002 6.7E-09 59.6 5.3 66 359-439 8-79 (114)
312 3rjz_A N-type ATP pyrophosphat 97.3 0.00053 1.8E-08 64.7 7.7 123 113-270 6-137 (237)
313 2h8l_A Protein disulfide-isome 97.2 0.0014 4.8E-08 62.1 10.3 102 352-462 115-228 (252)
314 3l9v_A Putative thiol-disulfid 97.2 0.00019 6.4E-09 65.3 3.2 42 371-413 14-58 (189)
315 3ec3_A Protein disulfide-isome 97.1 0.005 1.7E-07 58.2 12.8 102 352-462 117-226 (250)
316 3tue_A Tryparedoxin peroxidase 97.1 0.0025 8.6E-08 59.4 10.4 93 370-463 55-184 (219)
317 4eo3_A Bacterioferritin comigr 96.9 0.0015 5E-08 64.6 7.1 88 370-462 23-137 (322)
318 3sdb_A Glutamine-dependent NAD 96.8 0.0059 2E-07 66.3 11.7 69 101-169 350-427 (680)
319 3feu_A Putative lipoprotein; a 96.7 0.00088 3E-08 60.6 3.8 39 371-412 22-60 (185)
320 3l4n_A Monothiol glutaredoxin- 96.7 0.0016 5.5E-08 55.4 4.7 72 359-439 5-79 (127)
321 2wci_A Glutaredoxin-4; redox-a 96.6 0.0023 7.8E-08 55.0 5.3 67 359-439 26-99 (135)
322 1vbk_A Hypothetical protein PH 96.5 0.0042 1.4E-07 60.9 7.4 118 113-273 181-307 (307)
323 3gha_A Disulfide bond formatio 96.4 0.013 4.6E-07 53.5 9.5 43 370-412 28-72 (202)
324 3ed3_A Protein disulfide-isome 96.3 0.018 6.1E-07 56.0 10.5 101 351-460 143-263 (298)
325 3ipz_A Monothiol glutaredoxin- 96.2 0.0075 2.6E-07 49.5 6.0 59 371-439 17-82 (109)
326 3f4s_A Alpha-DSBA1, putative u 96.2 0.034 1.1E-06 51.9 11.2 42 370-411 38-81 (226)
327 3ilv_A Glutamine-dependent NAD 96.1 0.012 4E-07 63.5 8.8 65 106-170 297-404 (634)
328 1aba_A Glutaredoxin; electron 96.1 0.01 3.5E-07 46.3 6.0 55 375-439 2-74 (87)
329 2wem_A Glutaredoxin-related pr 96.0 0.011 3.7E-07 49.5 6.3 67 359-439 11-85 (118)
330 3gx8_A Monothiol glutaredoxin- 96.0 0.022 7.4E-07 47.8 8.0 66 360-439 8-83 (121)
331 3q6o_A Sulfhydryl oxidase 1; p 96.0 0.052 1.8E-06 50.6 11.4 98 353-462 140-238 (244)
332 1nm3_A Protein HI0572; hybrid, 95.9 0.014 4.9E-07 54.5 7.4 58 372-439 169-228 (241)
333 2ct6_A SH3 domain-binding glut 95.9 0.015 5.3E-07 47.8 6.5 55 374-439 9-81 (111)
334 3l9s_A Thiol:disulfide interch 95.9 0.0062 2.1E-07 55.3 4.5 41 371-412 21-64 (191)
335 1t1v_A SH3BGRL3, SH3 domain-bi 95.8 0.014 4.9E-07 46.1 5.9 54 375-439 4-69 (93)
336 3zyw_A Glutaredoxin-3; metal b 95.8 0.015 5.1E-07 47.9 6.1 65 360-439 8-80 (111)
337 2axo_A Hypothetical protein AT 95.6 0.081 2.8E-06 50.6 11.4 79 372-461 43-140 (270)
338 1q15_A CARA; CMPR, (2S,5S)-5-c 95.1 0.024 8.2E-07 59.3 6.2 107 112-225 239-351 (503)
339 1xiy_A Peroxiredoxin, pfaop; a 94.6 0.055 1.9E-06 48.7 6.3 92 370-462 42-180 (182)
340 3c7m_A Thiol:disulfide interch 94.4 0.062 2.1E-06 47.9 6.4 41 371-412 17-58 (195)
341 3t58_A Sulfhydryl oxidase 1; o 94.3 0.15 5E-06 53.5 9.9 98 352-461 139-237 (519)
342 4f4h_A Glutamine dependent NAD 94.0 0.16 5.6E-06 53.8 9.5 66 104-169 292-361 (565)
343 1jgt_A Beta-lactam synthetase; 93.9 0.091 3.1E-06 55.1 7.2 107 112-225 242-354 (513)
344 1ct9_A Asparagine synthetase B 93.9 0.34 1.2E-05 51.1 11.7 107 112-225 227-354 (553)
345 1u6t_A SH3 domain-binding glut 92.9 0.19 6.4E-06 42.1 6.1 58 374-433 1-69 (121)
346 2wul_A Glutaredoxin related pr 92.5 0.19 6.6E-06 41.8 5.7 68 358-439 10-85 (118)
347 3kzq_A Putative uncharacterize 92.2 1.1 3.6E-05 40.5 11.0 34 373-407 3-36 (208)
348 2xhf_A Peroxiredoxin 5; oxidor 90.9 0.15 5.1E-06 45.3 3.5 45 370-414 41-87 (171)
349 2kok_A Arsenate reductase; bru 89.5 0.82 2.8E-05 37.8 6.8 33 375-414 7-39 (120)
350 2jad_A Yellow fluorescent prot 89.2 0.22 7.6E-06 49.5 3.5 60 375-439 263-327 (362)
351 3gn3_A Putative protein-disulf 89.1 0.55 1.9E-05 41.9 5.8 41 370-411 13-54 (182)
352 3bci_A Disulfide bond protein 88.9 0.75 2.6E-05 40.6 6.6 42 370-411 10-53 (186)
353 3gmf_A Protein-disulfide isome 86.5 1.4 4.6E-05 40.1 6.9 43 370-412 14-58 (205)
354 3tdg_A DSBG, putative uncharac 86.0 0.56 1.9E-05 44.8 4.0 30 370-399 146-175 (273)
355 2x8g_A Thioredoxin glutathione 85.4 0.7 2.4E-05 48.9 5.0 67 359-439 9-80 (598)
356 1t4y_A Adaptive-response senso 84.4 13 0.00043 30.0 10.6 81 374-459 13-94 (105)
357 2in3_A Hypothetical protein; D 83.0 1.3 4.5E-05 39.8 5.1 43 417-462 166-208 (216)
358 1z3e_A Regulatory protein SPX; 79.0 2 6.9E-05 36.0 4.5 34 375-415 3-36 (132)
359 3l78_A Regulatory protein SPX; 73.9 3.5 0.00012 34.0 4.5 34 375-415 2-35 (120)
360 2g2q_A Glutaredoxin-2; thiored 72.1 6 0.00021 32.5 5.2 36 372-412 2-37 (124)
361 3fz4_A Putative arsenate reduc 68.4 6.7 0.00023 32.3 5.0 35 374-415 4-38 (120)
362 1rw1_A Conserved hypothetical 67.3 4.1 0.00014 33.1 3.5 33 375-414 2-34 (114)
363 3feu_A Putative lipoprotein; a 65.9 5.2 0.00018 35.3 4.2 41 417-462 142-182 (185)
364 3bci_A Disulfide bond protein 64.1 6.5 0.00022 34.3 4.4 38 417-462 139-176 (186)
365 1hyu_A AHPF, alkyl hydroperoxi 58.7 30 0.001 35.6 9.0 77 370-461 17-93 (521)
366 3gkx_A Putative ARSC family re 58.6 7.1 0.00024 32.1 3.4 34 375-415 6-39 (120)
367 3c7m_A Thiol:disulfide interch 56.8 5.3 0.00018 34.9 2.5 41 417-462 152-192 (195)
368 3ktb_A Arsenical resistance op 54.7 26 0.00088 28.3 5.9 64 390-460 26-102 (106)
369 2in3_A Hypothetical protein; D 54.4 23 0.00077 31.4 6.4 39 372-411 7-45 (216)
370 3hz8_A Thiol:disulfide interch 54.1 14 0.00047 32.6 4.8 38 417-462 144-181 (193)
371 1s3c_A Arsenate reductase; ARS 51.9 8 0.00027 32.8 2.7 78 375-460 4-86 (141)
372 3gn3_A Putative protein-disulf 49.8 13 0.00044 32.8 3.8 37 417-459 144-181 (182)
373 3rdw_A Putative arsenate reduc 49.6 7.7 0.00026 31.9 2.1 34 375-415 7-40 (121)
374 1wwj_A Circadian clock protein 46.6 6.1 0.00021 31.9 1.0 60 372-433 7-66 (105)
375 3kgk_A Arsenical resistance op 46.1 25 0.00085 28.5 4.6 64 390-460 23-99 (110)
376 3l9v_A Putative thiol-disulfid 45.2 19 0.00065 31.5 4.2 20 417-439 135-154 (189)
377 3lyk_A Stringent starvation pr 43.7 72 0.0025 27.9 8.0 59 373-439 5-63 (216)
378 3gl5_A Putative DSBA oxidoredu 42.6 27 0.00091 32.0 5.0 39 417-462 173-211 (239)
379 3gmf_A Protein-disulfide isome 42.1 19 0.00067 32.2 3.8 34 422-462 162-195 (205)
380 2imf_A HCCA isomerase, 2-hydro 38.9 18 0.00062 32.0 3.0 38 417-462 157-194 (203)
381 3f0i_A Arsenate reductase; str 38.2 18 0.00061 29.6 2.6 33 375-414 6-38 (119)
382 2d8c_A Phosphatidylcholine:cer 37.7 14 0.00048 29.2 1.8 21 253-273 14-34 (97)
383 1un2_A DSBA, thiol-disulfide i 37.6 18 0.00063 32.1 2.9 20 417-439 40-59 (197)
384 4dej_A Glutathione S-transfera 37.2 86 0.003 27.9 7.5 61 371-439 9-70 (231)
385 3l9s_A Thiol:disulfide interch 37.0 24 0.00083 31.1 3.5 20 417-439 141-160 (191)
386 4f03_A Glutathione transferase 32.1 64 0.0022 28.8 5.7 30 380-414 19-48 (253)
387 2r4v_A XAP121, chloride intrac 31.5 1.4E+02 0.0047 26.8 7.9 67 379-461 26-92 (247)
388 2gle_A Neurabin-1; SAM domain, 31.4 12 0.00041 27.6 0.5 20 254-273 2-21 (74)
389 1k0m_A CLIC1, NCC27, chloride 30.6 1.7E+02 0.0058 26.1 8.4 46 382-433 23-68 (241)
390 3bs7_A Protein aveugle; sterIl 30.3 15 0.00052 27.4 0.9 18 254-271 1-18 (78)
391 1kw4_A Polyhomeotic; SAM domai 29.6 25 0.00085 27.2 2.0 20 254-273 12-32 (89)
392 1vb5_A Translation initiation 28.9 3.1E+02 0.011 25.5 10.1 67 100-170 97-167 (276)
393 2ahe_A Chloride intracellular 28.9 2.1E+02 0.0071 26.1 8.9 67 379-461 31-97 (267)
394 4hoj_A REGF protein; GST, glut 28.6 1E+02 0.0035 26.7 6.3 57 375-439 4-60 (210)
395 3lyp_A Stringent starvation pr 27.8 1.6E+02 0.0056 25.4 7.6 57 375-439 9-65 (215)
396 3bq7_A Diacylglycerol kinase d 27.1 30 0.001 26.0 2.1 22 253-274 4-25 (81)
397 3lxz_A Glutathione S-transfera 26.3 1.7E+02 0.0057 25.6 7.4 53 375-434 3-55 (229)
398 3fz5_A Possible 2-hydroxychrom 25.6 45 0.0016 29.4 3.3 37 417-461 163-199 (202)
399 3ir4_A Glutaredoxin 2; glutath 25.5 1E+02 0.0035 26.8 5.8 52 375-433 4-55 (218)
400 2imf_A HCCA isomerase, 2-hydro 25.4 86 0.003 27.3 5.2 36 374-410 2-37 (203)
401 2yci_X 5-methyltetrahydrofolat 25.0 1.7E+02 0.0058 27.3 7.4 68 98-165 86-162 (271)
402 1gwc_A Glutathione S-transfera 24.4 2.5E+02 0.0084 24.4 8.2 54 374-433 6-60 (230)
403 1r4w_A Glutathione S-transfera 23.6 78 0.0027 28.2 4.6 40 416-459 171-210 (226)
404 3rpp_A Glutathione S-transfera 23.5 65 0.0022 29.2 4.1 40 417-460 172-211 (234)
405 3rbt_A Glutathione transferase 22.6 2E+02 0.0068 25.6 7.3 55 374-434 26-80 (246)
406 1s3a_A NADH-ubiquinone oxidore 22.6 2.7E+02 0.0091 21.7 7.1 74 374-462 21-97 (102)
407 4glt_A Glutathione S-transfera 22.5 89 0.003 27.6 4.7 58 375-439 23-80 (225)
408 1yy7_A SSPA, stringent starvat 22.0 2.1E+02 0.0071 24.7 7.1 54 374-433 10-63 (213)
409 1v85_A Similar to ring finger 22.0 34 0.0012 26.4 1.5 22 252-273 13-34 (91)
410 3vln_A GSTO-1, glutathione S-t 21.3 1.8E+02 0.0061 25.6 6.6 54 374-433 23-76 (241)
411 2e8o_A SAM domain and HD domai 20.9 39 0.0013 26.7 1.7 22 253-274 24-45 (103)
412 3bs5_B Connector enhancer of k 20.8 47 0.0016 24.7 2.1 19 254-272 2-20 (80)
413 1f6y_A 5-methyltetrahydrofolat 20.6 2.3E+02 0.0079 26.2 7.3 68 98-165 77-153 (262)
414 1z9h_A Membrane-associated pro 20.3 1.4E+02 0.0049 27.5 5.9 55 372-434 12-66 (290)
No 1
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1e-59 Score=462.01 Aligned_cols=239 Identities=51% Similarity=1.024 Sum_probs=201.0
Q ss_pred CChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHH
Q 012452 82 EGEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEK 160 (463)
Q Consensus 82 ~~~~~~~~l~~~l~~~~a~eil~~~~~~~~~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~ 160 (463)
.+.++++.+|++++.++++++|++++++|+++++|+|| ||||++| ||+.+.+.++.|+|+|||.+||||++|++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~a~~~l~~a~~~~g~~i~Va~S-GkDS~vLL~Ll~~~~~~i~vv~iDtg~~~~et~~~v~~~~~ 103 (275)
T 2goy_A 25 SQPFDLPALASSLADKSPQDILKAAFEHFGDELWISFS-GAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVRE 103 (275)
T ss_dssp ---CCHHHHHHHHTTSCHHHHHHHHHHHHSTTEEEECC-SSTTHHHHHHHHHHCTTCCEEEECCSCCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhccCCHHHHHHHHHHHcCCCEEEEee-cHHHHHHHHHHHHhCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 44668999999999999999999999999878999999 9998766 999999999999999999999999999999999
Q ss_pred HhCCcEEEEcCChHHHHHHHHhcCCCCCCccchhhhhhchhhhHHHHHHccCceEEEeeeccCC-cccccCCCceecCCC
Q 012452 161 HFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQS-PGTRSEIPVVQVDPV 239 (463)
Q Consensus 161 ~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~Rr~ES-~~~Ra~~~~~~~d~~ 239 (463)
+||++++++.|+...+.......|.+.++..+..+||.++|++|++++++++++|++|+|++|+ . .|+.+++++.|..
T Consensus 104 ~~gi~l~v~~~~~~~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~r~l~~~~~~itG~r~dds~~-~R~~~~~~~~d~~ 182 (275)
T 2goy_A 104 HYGIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSPG-TRSQVAVLEIDGA 182 (275)
T ss_dssp HHTCCCEEECCCHHHHHHHHHHHCSCHHHHHCTHHHHHHHTHHHHHHHHHTCSEEECCCCGGGTTS-CSCCCCSEEECTT
T ss_pred HHCCeEEEEeCCccCHHHHHHHhCCCCccccCHHHHHHHHHHHHHHHHHHhcCchhcCchhhhhhh-hhhhCcccccccc
Confidence 9999999999986555666677787666666678999999999999999999999999999999 5 8999999988753
Q ss_pred CcCCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCCccchhccCCcccCcccCCccCCCCCCcccccccccCCCccccccc
Q 012452 240 FEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLH 319 (463)
Q Consensus 240 ~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~Ct~~~~~g~~~r~GRw~~~~~~~~ecg~~ 319 (463)
+. . ..+++++++||++|+.+|||.|+++++|||||||++||+||||++||+|+.+|+++|+|||||++..|+|||||
T Consensus 183 ~~-~--~~~g~~~i~PL~~wt~~dV~~Yi~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~R~gRw~w~~~~k~ecGlh 259 (275)
T 2goy_A 183 FS-T--PEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLH 259 (275)
T ss_dssp TC-C--SSSCCEEECTTTTCCHHHHHHHHHHTTCCCCGGGGGTCSSCCCGGGBCCCCTTCCGGGGBSTTC----------
T ss_pred cc-c--CCCCeEEEechHhCCHHHHHHHHHHhCCCCChHHHcCCCCCCCccCCCCCCCCCccccCccccCCCCCccCCCC
Confidence 32 0 12468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccc
Q 012452 320 KGNIKQ 325 (463)
Q Consensus 320 ~~~~~~ 325 (463)
.+++..
T Consensus 260 ~~~~~~ 265 (275)
T 2goy_A 260 AGNLIS 265 (275)
T ss_dssp ------
T ss_pred cCcchh
Confidence 987754
No 2
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-56 Score=431.97 Aligned_cols=229 Identities=26% Similarity=0.440 Sum_probs=198.7
Q ss_pred ccCChhhHHHHHHHhccC-CHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHcCC---CeEEEEEeCCCCcHHHHHH
Q 012452 80 KVEGEEDFEQFAKELENA-SPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGR---PFRVFSLDTGRLNPETYRF 154 (463)
Q Consensus 80 ~~~~~~~~~~l~~~l~~~-~a~eil~~~~~~~~~~i~vafSGGKDS~vl-~L~~~~~~---~i~vi~~DTg~~fpeT~~~ 154 (463)
+.-+.++++.||++|+.+ +|+++|+|+++.|+ +++|+|||||||++| ||+.+..+ +++|+|+|||.+||||++|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~v~va~SGGkDS~vLL~ll~~~~~~~~~i~vv~iDtg~~~~et~~~ 88 (261)
T 2oq2_A 10 IIVTQEQLDHWNEQLIKLETPQEIIAWSIVTFP-HLFQTTAFGLTGLVTIDMLSKLSEKYYMPELLFIDTLHHFPQTLTL 88 (261)
T ss_dssp CEEEHHHHHHHHHHHTTCCSHHHHHHHHHHHCS-SEEEECCCCHHHHHHHHHHHHHTTTSCCCEEEEECCSCBCHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcccCHHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhCccCCCeeEEEecCCCCCHHHHHH
Confidence 445577899999999999 99999999999997 599999999998766 99998876 8999999999999999999
Q ss_pred HHHHHHHhCC----cEEEEcCChH-HHHHHHHhcCCCCCCccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCccc
Q 012452 155 FDEVEKHFGI----RIEYMFPDAV-EVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGT 227 (463)
Q Consensus 155 ~~~~~~~~gl----~i~~~~p~~~-~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~ 227 (463)
+++++++||+ +++++.|+.. .+..+....|.. ++..+..+||.++|++|++++++ +.++|++|+|++||. +
T Consensus 89 v~~~~~~~gl~~~~~l~v~~~~~~~~~~~~~~~~G~~-~~~~~~~~cc~~~K~~pl~~~l~~~g~~~~~tG~R~dds~-~ 166 (261)
T 2oq2_A 89 KNEIEKKYYQPKNQTIHVYKPDGCESEADFASKYGDF-LWEKDDDKYDYLAKVEPAHRAYKELHISAVFTGRRKSQGS-A 166 (261)
T ss_dssp HHHHHHHHTGGGTCCCEEECSTTCSSHHHHHHHHCTT-HHHHCHHHHHHHHTHHHHHHHHHHTTCSEEECCCCGGGCG-G
T ss_pred HHHHHHHhCCCCCCCeEEEecCCccCHHHHHHHhCCC-ccccChHHHHHHHhHHHHHHHHHHcCCCEEEEeccccchH-H
Confidence 9999999999 9999998741 133444555643 34455689999999999999999 456999999999996 9
Q ss_pred ccCCCceecCCCCcCCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCCccchhccCCcccCcccCCccCCCCCCccccccc
Q 012452 228 RSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWW 307 (463)
Q Consensus 228 Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~Ct~~~~~g~~~r~GRw~ 307 (463)
|+.++.+++++. +++++++||++|+.+|||.|++.++|||||||++||+||||++||+++++|+++|+|||
T Consensus 167 R~~~~~~~~~~~--------~~~~ki~PL~~wt~~dV~~Yi~~~~lp~~pLy~~Gy~siGC~~ct~~~~~~~~eR~gRw- 237 (261)
T 2oq2_A 167 RSQLSIIEIDEL--------NGILKINPLINWTFEQVKQYIDANNVPYNELLDLGYRSIGDYHSTQPVKEGEDERAGRW- 237 (261)
T ss_dssp GGGCCSEEEETT--------TTEEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCBGGGCCCCCTTSCTTTTTC-
T ss_pred HccCCceeecCC--------CCeEEEechHhCCHHHHHHHHHHcCCCCCchhhCCCCCCCCcCCCCcCCCCCCcccccc-
Confidence 999999887742 46899999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCccccccccc
Q 012452 308 WEDAKAKECGLHKG 321 (463)
Q Consensus 308 ~~~~~~~ecg~~~~ 321 (463)
++..|+|||||..
T Consensus 238 -~~~~k~ecGlh~~ 250 (261)
T 2oq2_A 238 -KGKAKTECGIHEA 250 (261)
T ss_dssp ------CCCTTTCC
T ss_pred -CCCCCcccCCCCC
Confidence 7778999999963
No 3
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=100.00 E-value=1.2e-54 Score=421.04 Aligned_cols=226 Identities=27% Similarity=0.434 Sum_probs=186.0
Q ss_pred CChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHH
Q 012452 82 EGEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEK 160 (463)
Q Consensus 82 ~~~~~~~~l~~~l~~~~a~eil~~~~~~~~~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~ 160 (463)
++.++++.+|++|+.++|+++|+|++++|+++++|+|||||||++| ||+.+..+++.++|+|||.+||||++|++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~v~va~SGG~DS~vLL~ll~~~~~~v~vv~idtg~~~~et~~~~~~~~~ 95 (252)
T 2o8v_A 16 DRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTD 95 (252)
T ss_dssp HHHHHTHHHHHHHTTSCHHHHHHHHHTTSCSCEEEECCCSTTHHHHHHHHHHHSTTCEEEECCCSCBCHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHhcCCCHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHHHHHHHHH
Confidence 4566889999999999999999999999987899999999998766 999998899999999999999999999999999
Q ss_pred HhCCcEEEEcCChHHHHHHHHhcCCCCCCc--cchhhhhhchhhhHHHHHHccCc--eEEEeeeccCCcccccCCCceec
Q 012452 161 HFGIRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQV 236 (463)
Q Consensus 161 ~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~--~~~~~Cc~~~Kv~Pl~r~l~~~~--~~itG~Rr~ES~~~Ra~~~~~~~ 236 (463)
+||++++++.|+.. ........| ..+.. ....+||.++|++|++++++++. +|++|+|++|+. .|+.++.++.
T Consensus 96 ~~gi~~~v~~~~~~-~~~~~~~~g-~~~~~~~~~~~~cc~~~K~~pl~~~l~~~~~~~~~tG~r~dds~-~R~~l~~~~~ 172 (252)
T 2o8v_A 96 KLKLNLKVYRATES-AAWQEARYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAI 172 (252)
T ss_dssp HTTCEEEECCCSSC-HHHHHHHTC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTCSEEEECCCSTTTT-CCTTSCSEEE
T ss_pred HhCCceEEEcCCCC-HHHHHHHcC-CccccCCchHHHHHHHHHHHHHHHHHHhcCCcEEEEeccccccc-ccccCceeec
Confidence 99999999988864 334445566 33322 13478999999999999999765 699999999997 9999988753
Q ss_pred CCCCcCCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCCccchhccCCcccCcccCCccCCCCCCcccccccccCCCcccc
Q 012452 237 DPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKEC 316 (463)
Q Consensus 237 d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~Ct~~~~~g~~~r~GRw~~~~~~~~ec 316 (463)
. ++..+++||++|+.+|||.|+++++|||||||++||+||||++||+++.+|+|+|+||| .+ .|+||
T Consensus 173 ~----------~~~~~i~PL~~wt~~dV~~y~~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~r~gRw--~~-~k~ec 239 (252)
T 2o8v_A 173 Q----------RGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRF--FG-LKREC 239 (252)
T ss_dssp S----------SSSEEECGGGSCCHHHHHHHHHHTTCCCCTTTTTTCSSCCBCTTTCC-----------------CCSCC
T ss_pred C----------CCeEEEechhhCCHHHHHHHHHHcCCCCChHHhCCCCCCCCcCcCCcCCCCCCcccccc--CC-CCccC
Confidence 2 35789999999999999999999999999999999999999999999999999999998 55 89999
Q ss_pred cccccCc
Q 012452 317 GLHKGNI 323 (463)
Q Consensus 317 g~~~~~~ 323 (463)
|||..+.
T Consensus 240 glh~~~~ 246 (252)
T 2o8v_A 240 GLHEGLE 246 (252)
T ss_dssp CSCCC--
T ss_pred CCCCCcc
Confidence 9998654
No 4
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=100.00 E-value=3.1e-44 Score=351.00 Aligned_cols=180 Identities=17% Similarity=0.261 Sum_probs=153.3
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHcC---CcEEEEechhHHHHHH-HHHHHc----------------------CCCeEEE
Q 012452 87 FEQFAKELENASPLEIMDRALEKFG---NDIAIAFSGAEDVALI-EYAHLT----------------------GRPFRVF 140 (463)
Q Consensus 87 ~~~l~~~l~~~~a~eil~~~~~~~~---~~i~vafSGGKDS~vl-~L~~~~----------------------~~~i~vi 140 (463)
+..+..+++. +..++|++++++|+ ++++|+|||||||+|| ||+.++ .++++||
T Consensus 32 ~~~~q~qir~-S~~~iLrea~~~f~~~~~~ialSfSGGKDStVLLhL~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipvi 110 (308)
T 3fwk_A 32 IAQTQRAINT-TKSILINETFPKWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPTV 110 (308)
T ss_dssp HHHHHHHHHH-HHHHHHHHTTTTSCSSSSSEEEECCSSHHHHHHHHHHHHHHHHHHTCCE-----------------EEE
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHcccccCCEEEEecCChhHHHHHHHHHHHhhhhcccccccccccccccccCCCCccEE
Confidence 6667777765 34469999999998 5799999999998766 888764 1579999
Q ss_pred EEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCccchhhhhhchhhhHHHHHHccCceEEEeee
Q 012452 141 SLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQR 220 (463)
Q Consensus 141 ~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~R 220 (463)
|+|||++||||++|+++++++||++|+++.|+... .-..+||.++|++| ++++||+|+|
T Consensus 111 fiDTG~~FpET~ef~d~~~~~ygL~L~v~~p~~~~---------------~~~~~cc~~~K~~P------~~~AwitG~R 169 (308)
T 3fwk_A 111 FIDHDDTFKTLENFIEETSLRYSLSLYESDRDKCE---------------TMAEAFETFLQVFP------ETKAIVIGIR 169 (308)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHTTEEEEECCTTSCC---------------CHHHHHHHHHHHCT------TCCEEECCCC
T ss_pred EEeCCCCCHHHHHHHHHHHHHhCCcEEEeCCCCCH---------------HHHHHHHHHHHhCC------CCCEEEEEee
Confidence 99999999999999999999999999999887321 01358999999999 5889999999
Q ss_pred ccCCcccccCCCceecCCCCcCCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCCccchhccCCcccCcccCCccCC
Q 012452 221 KDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVL 296 (463)
Q Consensus 221 r~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~Ct~~~~ 296 (463)
|+| + +|+++++++.+.. ++++++|++||++||..|||.||+.++|||||||++||+||||++||+|..
T Consensus 170 R~e-~-~Ra~l~~~e~~d~------~w~~~iKVnPL~dWT~~DVW~YI~~~~LPynpLYd~GY~SIGC~~CT~pnp 237 (308)
T 3fwk_A 170 HTD-P-FGEHLKPIQKTDA------NWPDFYRLQPLLHWNLANIWSFLLYSNEPICELYRYGFTSLGNVEETLPNP 237 (308)
T ss_dssp TTS-T-TCTTCCSEEECCT------TSCSCEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCCTTTBCCCG
T ss_pred cCC-c-ccCCCCeeeccCC------CCCCeEEEechhhCCHHHHHHHHHHcCCCCCcHHhcCCCCCCCCccCCCCh
Confidence 996 5 8999999887532 356899999999999999999999999999999999999999999999863
No 5
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=100.00 E-value=5e-41 Score=335.90 Aligned_cols=210 Identities=25% Similarity=0.417 Sum_probs=142.0
Q ss_pred ChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHc----CCCeEEEEEeCCCCcHHHHHHHHH
Q 012452 83 GEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLT----GRPFRVFSLDTGRLNPETYRFFDE 157 (463)
Q Consensus 83 ~~~~~~~l~~~l~~~~a~eil~~~~~~~~~~i~vafSGGKDS~vl-~L~~~~----~~~i~vi~~DTg~~fpeT~~~~~~ 157 (463)
....++.+.. .++++|+++++.|+ +++|+|||||||++| ||+.+. +.+++++|+|||.+||||++|+++
T Consensus 24 ~~~~L~~le~-----~a~~ilr~~~~~~~-~ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vDtg~~~~et~~~v~~ 97 (325)
T 1zun_A 24 KLTHLKQLEA-----ESIHIIREVAAEFD-NPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQ 97 (325)
T ss_dssp CCCHHHHHHH-----HHHHHHHHHHHHCS-SEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHH
T ss_pred hHHHHHHHHH-----HHHHHHHHHHHhCC-CEEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEECCCCCHHHHHHHHH
Confidence 3345555433 48999999999997 599999999998766 888886 568999999999999999999999
Q ss_pred HHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCcccccCCCcee
Q 012452 158 VEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQ 235 (463)
Q Consensus 158 ~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~ 235 (463)
++++||++++++.++.. ...|.+.+ ..+.++||.++|++||+++++ ++++|++|+|+||+. +|+.+++++
T Consensus 98 ~~~~~gi~l~v~~~~~~------~~~G~~~~-~~~~~~cc~~~K~~pL~~~l~e~g~~~i~tG~R~Des~-~Ra~~~~~~ 169 (325)
T 1zun_A 98 MVEEMGLDLITHINPDG------VAQGINPF-THGSAKHTDIMKTEGLKQALDKHGFDAAFGGARRDEEK-SRAKERVYS 169 (325)
T ss_dssp HHHTTTCCEEEECC---------------------CCHHHHHHTHHHHHHHHHHHTCSEEECCCCTTSSG-GGGGCCSEE
T ss_pred HHHHcCCCEEEEeCchH------HhcCCCcc-ccChHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhh-hhhccccee
Confidence 99999999999987643 12343332 345678999999999999998 678999999999997 999988876
Q ss_pred -------cCCCCcC-----C---cCCCCCeEEEEeCccCcHHHHHHHHHhCCCCccchh-------------------cc
Q 012452 236 -------VDPVFEG-----L---EGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLH-------------------SQ 281 (463)
Q Consensus 236 -------~d~~~~~-----~---~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy-------------------~~ 281 (463)
+++.... . ....++.++++||++|+.+|||.|++.++||||||| ++
T Consensus 170 ~r~~~~~~d~~~~rp~l~~~~n~~~~~g~~~~i~PLl~wt~~dIw~Yi~~~~lp~~~LY~~~~r~~~~r~g~~~~~~~~~ 249 (325)
T 1zun_A 170 FRDSKHRWDPKNQRPELWNVYNGNVNKGESIRVFPLSNWTELDIWQYIYLEGIPIVPLYFAAERDVIEKNGTLIMIDDER 249 (325)
T ss_dssp EECTTCCBCGGGCCCCCSSCCCCCCCTTCEEEECTTTTCCHHHHHHHHHHHTCCCCSCCSCC------------------
T ss_pred ccccccccCccccCcchhhhccccccCCCeEEEEchhhCCHHHHHHHHHHhCCCcchhhhcccccccccCCceeccchhh
Confidence 3321100 0 001124789999999999999999999999999999 69
Q ss_pred C------------------CcccCcccCCccCCCCC---------------Ccccccc
Q 012452 282 G------------------YISIGCEPCTRPVLPGQ---------------HEREGRW 306 (463)
Q Consensus 282 G------------------y~siGC~~Ct~~~~~g~---------------~~r~GRw 306 (463)
| |+||||+|||.++.+|+ .||.|||
T Consensus 250 g~~~~~~~~~~~~~~~~~ry~siGc~~cT~~v~~~~~~~~~~~~~~~~~~~~er~~R~ 307 (325)
T 1zun_A 250 ILEHLTDEEKSRIVKKKVRFRTLGCYPLTGAVESEATSLTDIIQEMLLTRTSERQGRV 307 (325)
T ss_dssp ----------------------------------------------------------
T ss_pred cccccCCCccccccccccccCCcCCcccCCccCCCCccHHHHHHHHHhcCCCcccccc
Confidence 9 99999999999998774 4899997
No 6
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=100.00 E-value=1.2e-38 Score=301.50 Aligned_cols=195 Identities=24% Similarity=0.399 Sum_probs=169.4
Q ss_pred ChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHH
Q 012452 83 GEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKH 161 (463)
Q Consensus 83 ~~~~~~~l~~~l~~~~a~eil~~~~~~~~~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~ 161 (463)
+.++++.+|.+|+.++++++|+++++.|+++|+|+|||||||++| ||+.+...++.++|+|||.++|+|++|+++++++
T Consensus 16 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~v~Va~SGGkDS~vLL~ll~~~~~~v~~v~vd~g~~~~e~~~~v~~~~~~ 95 (215)
T 1sur_A 16 RILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDK 95 (215)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHCCSEEEEECCCCTTHHHHHHHHHHHSTTCEEEEEECSCBCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhccCCHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999988899999999999766 9999988899999999999999999999999999
Q ss_pred hCCcEEEEcCChHHHHHHHHhcCCCCCCc--cchhhhhhchhhhHHHHHHccCc--eEEEeeeccCCcccccCCCceecC
Q 012452 162 FGIRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVD 237 (463)
Q Consensus 162 ~gl~i~~~~p~~~~~~~~~~~~g~~~~~~--~~~~~Cc~~~Kv~Pl~r~l~~~~--~~itG~Rr~ES~~~Ra~~~~~~~d 237 (463)
||++++++.++.. +.......| ..+.. ....+||..+|+.|+.+++++.. +|++|+|++|+. .|+.++.++..
T Consensus 96 ~gi~~~v~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~i~~G~r~dd~~-~r~~~~~~~~~ 172 (215)
T 1sur_A 96 LKLNLKVYRATES-AAWQEARYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAIQ 172 (215)
T ss_dssp TTCEEEEEECSSC-HHHHHHHHC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTEEEEECCCCTTSSS-TTTTCCSEEEE
T ss_pred hCCcEEEEeCCCC-HHHHHHhcC-CCCCCCccHHHHHHHHHHHHHHHHHHHhcCCceEEEEeehhhhh-hhcCCCccccC
Confidence 9999999988754 333444455 22222 13468999999999999998765 799999999996 89988776532
Q ss_pred CCCcCCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCCccchhccCCcccCccc
Q 012452 238 PVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEP 290 (463)
Q Consensus 238 ~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~ 290 (463)
++..+++||++|+.+|||.|+++++|||||||++||+|+||+|
T Consensus 173 ----------~~~~~i~PLl~~t~~dI~~y~~~~~lp~~~lY~~Gy~siGC~p 215 (215)
T 1sur_A 173 ----------RGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTH 215 (215)
T ss_dssp ----------TTEEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSCCCBCC
T ss_pred ----------CCEEEEechHhCCHHHHHHHHHHhCCCCChHHhCCCCCCCCCC
Confidence 3577899999999999999999999999999999999999986
No 7
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-38 Score=316.25 Aligned_cols=185 Identities=16% Similarity=0.272 Sum_probs=147.2
Q ss_pred HHH-HHHHHHHHcC---CcEEEEechhHHHHHH-HHHHHc----------------------CCCeEEEEEeCCCCcHHH
Q 012452 99 PLE-IMDRALEKFG---NDIAIAFSGAEDVALI-EYAHLT----------------------GRPFRVFSLDTGRLNPET 151 (463)
Q Consensus 99 a~e-il~~~~~~~~---~~i~vafSGGKDS~vl-~L~~~~----------------------~~~i~vi~~DTg~~fpeT 151 (463)
.++ +|+++++.|+ ++++|+|||||||+|| ||+.++ ..+++++|+|||.+||||
T Consensus 37 ~~~~il~~~~~~~~~~~~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet 116 (306)
T 2wsi_A 37 TRKYLLSEIFVRWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTL 116 (306)
T ss_dssp HHHHHHHTTTTTSCSSSSSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHHHcccccCCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHH
Confidence 455 8888899987 5799999999999766 888764 467999999999999999
Q ss_pred HHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCccchhhhhhchhhhHHHHHHccCceEEEeeeccCCcccccCC
Q 012452 152 YRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEI 231 (463)
Q Consensus 152 ~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~Rr~ES~~~Ra~~ 231 (463)
++|+++++++||++++++.++... . ..++ ..+...+|+.| ..+++++|+|++|+. .|+..
T Consensus 117 ~~fv~~~~~~ygl~l~v~~~~~~~------~---~~l~----~~~~~~~k~~p------~~~aii~G~Rrdds~-~r~l~ 176 (306)
T 2wsi_A 117 ENFVLETSERYCLSLYESQRQSGA------S---VNMA----DAFRDFIKIYP------ETEAIVIGIRHTDPF-GEALK 176 (306)
T ss_dssp HHHHHHHHHHTTEEEEECCC--------------CCHH----HHHHHHHHHCT------TCCEEECCCCCCSSS-CCCCC
T ss_pred HHHHHHHHHHcCCCEEEEeCCccc------c---ccHH----HHHHHHHhhCC------CCcEEEEEEeccccc-ccccC
Confidence 999999999999999988776321 0 0111 11223345555 346899999999996 77665
Q ss_pred CceecCCCCcCCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCCccchhccCCcccCcccCCccCCC---CCCcccccccc
Q 012452 232 PVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLP---GQHEREGRWWW 308 (463)
Q Consensus 232 ~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~siGC~~Ct~~~~~---g~~~r~GRw~~ 308 (463)
.+...|. +++++++++||++|+++|||.|++.++|||||||++||+||||++||+|... +++.+.+||||
T Consensus 177 ~~~~~d~-------~~p~~~ri~PL~dWt~~DVw~Yi~~~~lpy~pLYd~GY~SiGc~~cT~pnp~l~~~~~~~~~~~~w 249 (306)
T 2wsi_A 177 PIQRTDS-------NWPDFMRLQPLLHWDLTNIWSFLLYSNEPICGLYGKGFTSIGGINNSLPNPHLRKDSNNPALHFEW 249 (306)
T ss_dssp SEEECCT-------TSCSCEEECTTTTCCHHHHHHHHHHHCCCBCHHHHTTCSSCCCTTTBCSCGGGBGGGCCCCCSCHH
T ss_pred ceeccCC-------CCCCcEEEeChHHCCHHHHHHHHHHcCCCCChhHhcCCCcCCcccCCCcCHHHhcccccccccccc
Confidence 5433332 4467899999999999999999999999999999999999999999998753 56678999999
Q ss_pred cC
Q 012452 309 ED 310 (463)
Q Consensus 309 ~~ 310 (463)
|-
T Consensus 250 e~ 251 (306)
T 2wsi_A 250 EI 251 (306)
T ss_dssp HH
T ss_pred cc
Confidence 74
No 8
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.84 E-value=1.2e-20 Score=157.66 Aligned_cols=103 Identities=19% Similarity=0.377 Sum_probs=88.9
Q ss_pred eeec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 353 LVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 353 V~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
|.++ +.++|++.+. ...++++||+|||+||++|+.+.|.|+++++.+++ +.|++||+|++ ++++ ++|+|.++||
T Consensus 2 V~~i~~~~~f~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~-~~l~-~~~~V~~~PT 76 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLN-EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDEC-EDIA-QDNQIACMPT 76 (105)
T ss_dssp CEECCSHHHHHHHHH-HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTC-HHHH-HHTTCCBSSE
T ss_pred eEEeCCHHHHHHHHH-hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccC-HHHH-HHcCCCeecE
Confidence 4555 4578999886 34578999999999999999999999999999876 99999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHhC
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 463 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l~ 463 (463)
+++|++|+. ...+.| .+.++|.+||++.|
T Consensus 77 ~~~~~~G~~-v~~~~G--~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 77 FLFMKNGQK-LDSLSG--ANYDKLLELVEKNK 105 (105)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHHC
T ss_pred EEEEECCEE-EEEEeC--cCHHHHHHHHHhcC
Confidence 999999884 334444 68999999999865
No 9
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.84 E-value=4.2e-20 Score=158.70 Aligned_cols=108 Identities=15% Similarity=0.361 Sum_probs=96.6
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC----CCeEEEEEEcCCCcHHHHHHcCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQKEYAKQKLQ 425 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~----~~v~f~~VD~d~~~~~l~~~~~~ 425 (463)
.+.|.+|++++|++.+. +.++++||+|||+||++|+.+.|.|+++++.+.. .++.|+.||++.+ ++++ ++|+
T Consensus 14 ~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~ 89 (127)
T 3h79_A 14 PSRVVELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKY-PDVI-ERMR 89 (127)
T ss_dssp CCCCEECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTC-HHHH-HHTT
T ss_pred CCceEECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcccc-HhHH-HhcC
Confidence 45799999999999885 3589999999999999999999999999998742 3699999999999 9999 9999
Q ss_pred CCCCCEEEEEeCCCcC-eeecCCCCCCHHHHHHHHHHh
Q 012452 426 LGSFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 I~~~PTi~~f~~g~~~-~~~y~gg~~~~~~L~~fI~~l 462 (463)
|.++||+++|++|+.. +..|.| .++.++|.+||+++
T Consensus 90 v~~~Pt~~~~~~g~~~~~~~~~G-~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 VSGFPTMRYYTRIDKQEPFEYSG-QRYLSLVDSFVFQN 126 (127)
T ss_dssp CCSSSEEEEECSSCSSSCEECCS-CCCHHHHHHHHHHH
T ss_pred CccCCEEEEEeCCCCCCceEecC-CccHHHHHHHHHhc
Confidence 9999999999988764 378887 69999999999875
No 10
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.80 E-value=2.3e-19 Score=158.82 Aligned_cols=106 Identities=11% Similarity=0.119 Sum_probs=90.0
Q ss_pred CeeecC-hhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 352 NLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 352 ~V~~lt-~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
.|..|+ .++|++.+. .+.+++|||.|||+||++|+.+.|.|+++++++.+ .+.|++||+|++ ++++ .+|+|.++|
T Consensus 22 mv~~l~t~~~f~~~v~-~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~-~v~f~kVDVDe~-~e~a-~~y~V~siP 97 (160)
T 2av4_A 22 MLQHLNSGWAVDQAIV-NEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN-FCVIYLVDITEV-PDFN-TMYELYDPV 97 (160)
T ss_dssp CCEECCSHHHHHHHHH-HCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TTTTCCSSE
T ss_pred hhhccCCHHHHHHHHH-hcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCCCCCC
Confidence 466775 588988774 23678999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcCe-e-------ecCCCCCC-HHHHHHHHHHh
Q 012452 431 TILFFPKHSSKP-I-------KYPSERRD-VDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~-~-------~y~gg~~~-~~~L~~fI~~l 462 (463)
|++||++|+... . +..| ... .++|.++|+++
T Consensus 98 T~~fFk~G~~v~vd~Gtgd~~k~vG-a~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 98 SVMFFYRNKHMMIDLGTGNNNKINW-PMNNKQEFIDIVETI 137 (160)
T ss_dssp EEEEEETTEEEEEECSSSCCSCBCS-CCCCHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecCCCCcCeEEe-ecCCHHHHHHHHHHH
Confidence 999999998421 1 4556 555 88999998864
No 11
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.80 E-value=8.1e-19 Score=146.06 Aligned_cols=105 Identities=19% Similarity=0.277 Sum_probs=94.3
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
..|.+++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 78 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIY--DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEEE-KTLF-QRFSLKGVP 78 (111)
T ss_dssp CCSEECCHHHHHHHHT--TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSSC
T ss_pred CcceecCHHHHHHHHH--hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCcC-hhHH-HhcCCCcCC
Confidence 4689999999999883 3689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 79 t~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 79 QILYFKDGEY-KGKMAG-DVEDDEVEQMIADV 108 (111)
T ss_dssp EEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEec-cCCHHHHHHHHHHH
Confidence 9999988874 445666 68999999999875
No 12
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=7.1e-19 Score=153.07 Aligned_cols=105 Identities=26% Similarity=0.534 Sum_probs=95.7
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCC--CeEEEEEEcCCCcHHHHHHcCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQLG 427 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~--~v~f~~VD~d~~~~~l~~~~~~I~ 427 (463)
...|..|+.++|++++. .++++||+||++||++|+.+.|.|+++++.+.+. ++.|+.||++.+ .+++ ++|+|.
T Consensus 16 ~~~v~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~ 90 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA-SMLA-SKFDVS 90 (140)
T ss_dssp ETTEEECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC-HHHH-HHTTCC
T ss_pred CCCCEEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc-HHHH-HHCCCC
Confidence 36799999999999886 7899999999999999999999999999999873 499999999999 9999 999999
Q ss_pred CCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++||+++|++|+ ...|.| .++.++|.+||+++
T Consensus 91 ~~Pt~~~~~~G~--~~~~~g-~~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 91 GYPTIKILKKGQ--AVDYDG-SRTQEEIVAKVREV 122 (140)
T ss_dssp SSSEEEEEETTE--EEECCS-CCCHHHHHHHHHHH
T ss_pred ccCeEEEEECCc--EEEcCC-CCCHHHHHHHHHHh
Confidence 999999998887 677877 79999999999875
No 13
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=9.9e-19 Score=150.18 Aligned_cols=111 Identities=26% Similarity=0.531 Sum_probs=97.5
Q ss_pred cccCC-CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcC
Q 012452 346 DIFNS-QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKL 424 (463)
Q Consensus 346 ~~~~~-~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~ 424 (463)
.++.. ..|..++.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ .+.|+.||++.+ .+++ ++|
T Consensus 11 ~l~~~~~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~ 85 (130)
T 2dml_A 11 GLYSSSDDVIELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD-VVKVGAVNADKH-QSLG-GQY 85 (130)
T ss_dssp CSSCTTSSSEECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHH
T ss_pred cccCCCCCcEECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC-ceEEEEEeCCCC-HHHH-HHc
Confidence 34443 5799999999999653 4688999999999999999999999999999987 699999999999 9999 999
Q ss_pred CCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|.++||+++|++|+.....+.| ..+.++|.+||.+.
T Consensus 86 ~v~~~Pt~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 86 GVQGFPTIKIFGANKNKPEDYQG-GRTGEAIVDAALSA 122 (130)
T ss_dssp TCCSSSEEEEESSCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCCeEEEeec-CCCHHHHHHHHHHH
Confidence 99999999999988865677777 78999999999753
No 14
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.79 E-value=2.2e-19 Score=156.32 Aligned_cols=106 Identities=9% Similarity=0.187 Sum_probs=91.9
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCC--hhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWC--QFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG 427 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC--~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~ 427 (463)
......+++++|++.+. +.++++||+|||+|| ++|+.+.|.+++++++|.+ ++.|++||+|++ ++++ .+|+|.
T Consensus 14 ~~g~~~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~-~v~~~KVdvDe~-~~la-~~ygV~ 88 (137)
T 2qsi_A 14 PNAPTLVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG-RLVAAEVAAEAE-RGLM-ARFGVA 88 (137)
T ss_dssp ---CEEECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT-TEEEEEECGGGH-HHHH-HHHTCC
T ss_pred hcCCcccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC-CcEEEEEECCCC-HHHH-HHcCCc
Confidence 34667899999999885 344599999999999 9999999999999999987 899999999999 9999 999999
Q ss_pred CCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++||+++|++|+ .+....|..+.++|.++|+++
T Consensus 89 siPTlilFkdG~--~v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 89 VCPSLAVVQPER--TLGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp SSSEEEEEECCE--EEEEEESCCCHHHHHHHHHHH
T ss_pred cCCEEEEEECCE--EEEEEeCCCCHHHHHHHHHHH
Confidence 999999999999 444444478999999999864
No 15
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.78 E-value=1.4e-18 Score=143.84 Aligned_cols=104 Identities=24% Similarity=0.400 Sum_probs=94.7
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|..++.++|++.+. .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 4 ~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~P 77 (109)
T 3tco_A 4 DVTLVLTEENFDEVIR---NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG-KAVFGRLNVDEN-QKIA-DKYSVLNIP 77 (109)
T ss_dssp CCCEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CeEEEecHHHHHHHHh---cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC-CceEEEEccccC-HHHH-HhcCcccCC
Confidence 5788999999999987 689999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|.+|+. ...+.| ..+.++|.++|+++
T Consensus 78 t~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 78 TTLIFVNGQL-VDSLVG-AVDEDTLESTVNKY 107 (109)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEcCCcE-EEeeec-cCCHHHHHHHHHHH
Confidence 9999988874 445666 68999999999875
No 16
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.78 E-value=1.4e-18 Score=151.53 Aligned_cols=109 Identities=24% Similarity=0.417 Sum_probs=94.0
Q ss_pred CCCCeeecChhhHHHHHhhcC---------CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHH
Q 012452 349 NSQNLVTLNRTGMENLARLDH---------RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEY 419 (463)
Q Consensus 349 ~~~~V~~lt~~~f~~~i~~~~---------~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l 419 (463)
....|..++.++|+..+...+ .++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ +++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~ 97 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG-KIYIYKVNVDKE-PEL 97 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC-ceEEEEEECCCC-HHH
Confidence 345899999999999876222 478999999999999999999999999999987 799999999999 999
Q ss_pred HHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 420 AKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 420 ~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+ ++|+|.++||+++|++++. ...+.| ..+.++|.+||+++
T Consensus 98 ~-~~~~v~~~Pt~~~~~~~g~-~~~~~G-~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 98 A-RDFGIQSIPTIWFVPMKGE-PQVNMG-ALSKEQLKGYIDKV 137 (141)
T ss_dssp H-HHTTCCSSSEEEEECSSSC-CEEEES-CCCHHHHHHHHHHT
T ss_pred H-HHcCCCCcCEEEEEeCCCC-EEEEeC-CCCHHHHHHHHHHH
Confidence 9 9999999999999965554 456766 68999999999875
No 17
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.78 E-value=1.9e-19 Score=157.22 Aligned_cols=103 Identities=11% Similarity=0.074 Sum_probs=93.3
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCC--ChhHHHhHHHHHHHHHHhcCCC-eEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKLAGNG-VKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~w--C~~C~~~~p~l~~la~~~~~~~-v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
.+..+++++|++.+. .++++||+|||+| |++|+.+.|.+++++++|.+ + +.|++||+|++ ++++ .+|+|.+
T Consensus 18 g~~~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g-~~v~~~KVdvDe~-~~lA-~~ygV~s 91 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD-YTWQVAIADLEQS-EAIG-DRFGAFR 91 (140)
T ss_dssp TCEECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT-SCCEEEECCHHHH-HHHH-HHHTCCS
T ss_pred CCccCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC-CeEEEEEEECCCC-HHHH-HHcCCcc
Confidence 678999999999886 7789999999999 99999999999999999988 7 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. +....|..+.++|.++|+++
T Consensus 92 IPTlilFk~G~~--v~~~~G~~~k~~l~~~i~~~ 123 (140)
T 2qgv_A 92 FPATLVFTGGNY--RGVLNGIHPWAELINLMRGL 123 (140)
T ss_dssp SSEEEEEETTEE--EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEECCEE--EEEEecCCCHHHHHHHHHHH
Confidence 999999999994 44444478999999999864
No 18
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.78 E-value=2.3e-18 Score=142.72 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=92.8
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|..++.++|++.+. +.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 76 (108)
T ss_dssp TTEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-TTHH-HHTTCCSSS
T ss_pred CcceecchhhHHHHHH--hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCcccC
Confidence 4789999999997653 4789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 77 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 106 (108)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCEE-EEEEec-CCCHHHHHHHHHHh
Confidence 9999988873 344555 68999999999875
No 19
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.78 E-value=1.9e-18 Score=157.44 Aligned_cols=112 Identities=15% Similarity=0.272 Sum_probs=94.9
Q ss_pred cccCCCCeeecChhhHHHHHhhcCCCCcEEEEEec-------CCChhHHHhHHHHHHHHHHhc-----CCCeEEEEEEcC
Q 012452 346 DIFNSQNLVTLNRTGMENLARLDHRQEPWLVVLYA-------PWCQFCQAMEGSYVELADKLA-----GNGVKVGKFRAD 413 (463)
Q Consensus 346 ~~~~~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA-------~wC~~C~~~~p~l~~la~~~~-----~~~v~f~~VD~d 413 (463)
.+..++.|++||+++|++++. ..++.++||+||| +||++|+.+.|.|++||+.+. + ++.|++||+|
T Consensus 13 ~l~~~~~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~-~v~f~kvD~d 90 (178)
T 3ga4_A 13 QLKDDTGVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQS-LNLFFTVDVN 90 (178)
T ss_dssp TTCCTTSEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEEETT
T ss_pred HhhccCCCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCC-CEEEEEEECc
Confidence 334456899999999999875 3356789999999 499999999999999999997 5 7999999999
Q ss_pred CCcHHHHHHcCCCCCCCEEEEEeCCCcCe-----------eecC---CCCCCHHHHHHHHHH
Q 012452 414 GDQKEYAKQKLQLGSFPTILFFPKHSSKP-----------IKYP---SERRDVDSLMAFVDA 461 (463)
Q Consensus 414 ~~~~~l~~~~~~I~~~PTi~~f~~g~~~~-----------~~y~---gg~~~~~~L~~fI~~ 461 (463)
++ ++++ ++|+|+++||+++|++|+... ..|. ++.++++.|.+||.+
T Consensus 91 ~~-~~la-~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~ 150 (178)
T 3ga4_A 91 EV-PQLV-KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAK 150 (178)
T ss_dssp TC-HHHH-HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHH
T ss_pred cC-HHHH-HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHH
Confidence 99 9999 999999999999999987533 4441 225899999999975
No 20
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.4e-18 Score=148.04 Aligned_cols=105 Identities=26% Similarity=0.566 Sum_probs=94.0
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhc----CCCeEEEEEEcCCCcHHHHHHcCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA----GNGVKVGKFRADGDQKEYAKQKLQL 426 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~----~~~v~f~~VD~d~~~~~l~~~~~~I 426 (463)
..|..++.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+. + ++.|+.||++.+ .+++ ++|+|
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v 81 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVL--DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKG-KVKLAAVDATVN-QVLA-SRYGI 81 (133)
T ss_dssp CSCEECCTTHHHHHTT--TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTT-SEEEEEEETTTC-CHHH-HHHTC
T ss_pred CcCEEcCHhhHHHHHh--cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCC-cEEEEEEECCCC-HHHH-HhCCC
Confidence 5799999999999763 367899999999999999999999999999997 4 699999999999 9999 99999
Q ss_pred CCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 427 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++||+++|++|+. ...+.| .++.++|.+||+++
T Consensus 82 ~~~Pt~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 82 RGFPTIKIFQKGES-PVDYDG-GRTRSDIVSRALDL 115 (133)
T ss_dssp CSSSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred CeeCeEEEEeCCCc-eEEecC-CCCHHHHHHHHHHH
Confidence 99999999999763 566776 78999999999864
No 21
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.77 E-value=3e-18 Score=141.21 Aligned_cols=103 Identities=20% Similarity=0.290 Sum_probs=93.2
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
..+.+++.++|++.+ .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 75 (106)
T 3die_A 3 MAIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEG-KADILKLDVDEN-PSTA-AKYEVMSIP 75 (106)
T ss_dssp CCCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred cceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEECCcC-HHHH-HhCCCcccC
Confidence 468899999999977 689999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 3die_A 76 TLIVFKDGQP-VDKVVG-FQPKENLAEVLDKH 105 (106)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEEeCCeE-EEEEeC-CCCHHHHHHHHHHh
Confidence 9999998874 445666 78999999999875
No 22
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.77 E-value=4.5e-18 Score=140.38 Aligned_cols=105 Identities=21% Similarity=0.344 Sum_probs=93.4
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|.+++.++|++.+. ..+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 2 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 76 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVL--KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDDN-PETP-NAYQVRSIP 76 (107)
T ss_dssp CCEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTTC-CHHH-HHTTCCSSS
T ss_pred CceeecchhhhhHHHH--hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCCC-HHHH-HhcCCCccC
Confidence 4789999999998663 4789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 77 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 77 TLMLVRDGKV-IDKKVG-ALPKSQLKAWVESA 106 (107)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHT
T ss_pred EEEEEeCCEE-EEEecC-CCCHHHHHHHHHhc
Confidence 9999988873 344555 68999999999876
No 23
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.77 E-value=2.8e-18 Score=141.48 Aligned_cols=102 Identities=24% Similarity=0.393 Sum_probs=90.8
Q ss_pred eeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012452 353 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 432 (463)
Q Consensus 353 V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi 432 (463)
|.++++++|++++. .+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||+
T Consensus 2 v~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 75 (105)
T 1nsw_A 2 TMTLTDANFQQAIQ---GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD-KVTVAKLNVDEN-PETT-SQFGIMSIPTL 75 (105)
T ss_dssp CEEECTTTHHHHHS---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceeccHHhHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CcEEEEEECcCC-HHHH-HHcCCccccEE
Confidence 67899999997765 789999999999999999999999999999987 699999999999 9999 99999999999
Q ss_pred EEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 433 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 433 ~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 76 ~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 76 ILFKGGRP-VKQLIG-YQPKEQLEAQLADV 103 (105)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHTTTT
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHHH
Confidence 99988763 344555 68899999998765
No 24
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3.8e-18 Score=145.95 Aligned_cols=102 Identities=19% Similarity=0.441 Sum_probs=91.5
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|.+++.++|+++++ +.+||+|||+||++|+.+.|.|+++++.+++.++.|+.||++++ .+++ ++|+|.++|
T Consensus 7 ~~v~~l~~~~f~~~~~-----~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~P 79 (126)
T 1x5e_A 7 GNVRVITDENWRELLE-----GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQ-PGLS-GRFIINALP 79 (126)
T ss_dssp CSEEECCTTTHHHHTS-----SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccEEecHHHHHHHhC-----CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCC-HHHH-HHcCCcccC
Confidence 4799999999998764 23999999999999999999999999999754699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+ ...+.| ..+.++|.+||+++
T Consensus 80 t~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 80 TIYHCKDGE--FRRYQG-PRTKKDFINFISDK 108 (126)
T ss_dssp EEEEEETTE--EEECCS-CCCHHHHHHHHHTC
T ss_pred EEEEEeCCe--EEEeec-CCCHHHHHHHHHHH
Confidence 999998887 577777 78999999999864
No 25
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.76 E-value=4.7e-18 Score=141.22 Aligned_cols=104 Identities=24% Similarity=0.513 Sum_probs=93.2
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~--~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
+.|..+++++|++.+. +++++|+||++||++|+.+.|.|+++++.+.. .++.|+.||++.+ ++++ ++|+|.+
T Consensus 5 ~~v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~v~~ 78 (111)
T 3uvt_A 5 STVLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAE-RNIC-SKYSVRG 78 (111)
T ss_dssp CCSEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecccc-HhHH-HhcCCCc
Confidence 4799999999999885 67999999999999999999999999998764 2699999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. ...+.| ..+.++|.+||++.
T Consensus 79 ~Pt~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 79 YPTLLLFRGGKK-VSEHSG-GRDLDSLHRFVLSQ 110 (111)
T ss_dssp SSEEEEEETTEE-EEEECS-CCSHHHHHHHHHHH
T ss_pred ccEEEEEeCCcE-EEeccC-CcCHHHHHHHHHhc
Confidence 999999988874 456666 68999999999864
No 26
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.76 E-value=4.7e-18 Score=146.18 Aligned_cols=102 Identities=18% Similarity=0.251 Sum_probs=90.4
Q ss_pred CCeeecCh-hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 351 QNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~lt~-~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
..|.+++. ++|++.+. .++++||+|||+||++|+.+.|.|+++++.++ ++.|+.||++.+ .+++ ++|+|.++
T Consensus 19 ~mv~~l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~-~~l~-~~~~v~~~ 91 (125)
T 1r26_A 19 PSVVDVYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNN-SEIV-SKCRVLQL 91 (125)
T ss_dssp SCCEEECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceEECCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCC-HHHH-HHcCCCcc
Confidence 45889998 99999885 88999999999999999999999999999995 499999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 92 Pt~~i~~~G~~-~~~~~G--~~~~~l~~~l~~~ 121 (125)
T 1r26_A 92 PTFIIARSGKM-LGHVIG--ANPGMLRQKLRDI 121 (125)
T ss_dssp SEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred cEEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 99999988873 334555 5889999999875
No 27
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.76 E-value=2.4e-18 Score=145.59 Aligned_cols=104 Identities=18% Similarity=0.281 Sum_probs=91.2
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
......+.++|++++. ...++++||+|||+||++|+.+.|.|+++++++++ +.|+.||++.+ ++++ ++|+|.++|
T Consensus 12 ~~~~~~t~~~f~~~l~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~-~~l~-~~~~v~~~P 86 (116)
T 3qfa_C 12 SVKQIESKTAFQEALD-AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SECEVKSMP 86 (116)
T ss_dssp CCBCCCCHHHHHHHHH-HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred cccCCCCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCcccc
Confidence 3566678999999886 23689999999999999999999999999999876 99999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 87 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 87 TFQFFKKGQK-VGEFSG-A-NKEKLEATINEL 115 (116)
T ss_dssp EEEEESSSSE-EEEEES-C-CHHHHHHHHHHH
T ss_pred EEEEEeCCeE-EEEEcC-C-CHHHHHHHHHHh
Confidence 9999988873 445555 5 999999999875
No 28
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.76 E-value=3.1e-18 Score=149.81 Aligned_cols=106 Identities=19% Similarity=0.332 Sum_probs=93.9
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
...|..++.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 5 ~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~ 79 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVE--DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS-SAVFGRINIATN-PWTA-EKYGVQGT 79 (140)
T ss_dssp TTTEEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTC-HHHH-HHHTCCEE
T ss_pred CcceEEcchHhHHHHHH--hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC-ceEEEEEECCcC-HhHH-HHCCCCcC
Confidence 35799999999995443 3689999999999999999999999999999988 799999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 80 PTFKFFCHGRP-VWEQVG-QIYPSILKNAVRDM 110 (140)
T ss_dssp SEEEEEETTEE-EEEEES-SCCHHHHHHHHHHH
T ss_pred CEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99999988874 445666 68999999999865
No 29
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.76 E-value=5.1e-18 Score=140.17 Aligned_cols=103 Identities=17% Similarity=0.326 Sum_probs=92.6
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
.|.+++.++|++++. .+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (109)
T 2yzu_A 2 KPIEVTDQNFDETLG---QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG-KLLVAKLDVDEN-PKTA-MRYRVMSIPT 75 (109)
T ss_dssp CCEECCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred cceEccHhHHHHHhc---CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-ceEEEEEECCCC-HhHH-HhCCCCcCCE
Confidence 578999999998776 789999999999999999999999999999987 699999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 76 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 76 VILFKDGQP-VEVLVG-AQPKRNYQAKIEKH 104 (109)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCcE-eeeEeC-CCCHHHHHHHHHHH
Confidence 999988773 345666 68999999999875
No 30
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.76 E-value=1.1e-17 Score=147.50 Aligned_cols=105 Identities=17% Similarity=0.401 Sum_probs=94.9
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
...+..++.++|++++. .++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 37 ~~~v~~l~~~~~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~-~~l~-~~~~v~~~ 110 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG-KVRFVKVNTEAE-PALS-TRFRIRSI 110 (148)
T ss_dssp CCCCEECCTTTHHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cCCceecCHHHHHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC-ceEEEEEECcCC-HHHH-HHCCCCcc
Confidence 34789999999999885 889999999999999999999999999999987 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 111 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 111 PTIMLYRNGKM-IDMLNG-AVPKAPFDNWLDEQ 141 (148)
T ss_dssp SEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE-EEEEeC-CCCHHHHHHHHHHH
Confidence 99999998874 445666 79999999999865
No 31
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.76 E-value=6.2e-18 Score=143.52 Aligned_cols=106 Identities=22% Similarity=0.375 Sum_probs=93.7
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
++.+..+++++|++.+. +.++++||+||++||++|+.+.|.|+++++++.+ ++.|+.||++.+ .+++ ++|+|.++
T Consensus 12 ~~~~~~~~~~~f~~~v~--~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~ 86 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVV--NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDDH-TDLA-IEYEVSAV 86 (119)
T ss_dssp CSEEECCSHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTTT-HHHH-HHTTCCSS
T ss_pred ceEEEecChhhHHHHHH--cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCCC-HHHH-HHcCCCcc
Confidence 45799999999998664 4688999999999999999999999999999987 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 87 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 87 PTVLAMKNGDV-VDKFVG-IKDEDQLEAFLKKL 117 (119)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred cEEEEEeCCcE-EEEEcC-CCCHHHHHHHHHHH
Confidence 99999987773 345555 68999999999875
No 32
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.76 E-value=3.6e-18 Score=143.31 Aligned_cols=102 Identities=20% Similarity=0.300 Sum_probs=91.6
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
.|++++.++|++.+ .+++++|+||++||++|+.+.|.|+++++++++ ++.|+.||++.+ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 74 (112)
T 2voc_A 2 AIVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDEN-QETA-GKYGVMSIPT 74 (112)
T ss_dssp CCEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTC-CSHH-HHTTCCSBSE
T ss_pred CeEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCC-HHHH-HHcCCCcccE
Confidence 47889999999977 689999999999999999999999999999987 799999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 75 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 75 LLVLKDGEV-VETSVG-FKPKEALQELVNKH 103 (112)
T ss_dssp EEEEETTEE-EEEEES-CCCHHHHHHHHHTT
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999987773 445666 79999999999865
No 33
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.76 E-value=6e-18 Score=151.06 Aligned_cols=104 Identities=23% Similarity=0.464 Sum_probs=93.5
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
..+.+++.++|++.+. .++++||+||++||++|+.+.|.|+++++++.+ ++.|++||++.+ ++++ ++|+|.++|
T Consensus 47 ~~~~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~-~v~~~~vd~~~~-~~l~-~~~~i~~~P 120 (155)
T 2ppt_A 47 GKVAGIDPAILARAER---DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG-QVRLAKIDTQAH-PAVA-GRHRIQGIP 120 (155)
T ss_dssp SSEEECCHHHHHHHTT---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTS-THHH-HHTTCCSSS
T ss_pred CCCccCCHHHHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC-CEEEEEEeCCcc-HHHH-HHcCCCcCC
Confidence 3688999999999874 789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 121 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 121 AFILFHKGRE-LARAAG-ARPASELVGFVRGK 150 (155)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCeE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999988874 344555 78999999999875
No 34
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.76 E-value=6.9e-18 Score=139.56 Aligned_cols=104 Identities=21% Similarity=0.338 Sum_probs=92.1
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
.|..+++++|++.+. +.+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (107)
T 1dby_A 2 EAGAVNDDTFKNVVL--ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD-KLKCVKLNTDES-PNVA-SEYGIRSIPT 76 (107)
T ss_dssp CCEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHHTCCSSCE
T ss_pred ccEeccHHHHHHHHh--cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC-ceEEEEEECCCC-HHHH-HHCCCCcCCE
Confidence 478899999998764 3689999999999999999999999999999987 699999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 77 IMVFKGGKK-CETIIG-AVPKATIVQTVEKY 105 (107)
T ss_dssp EEEESSSSE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 999987773 344555 68899999999875
No 35
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.75 E-value=8e-18 Score=140.50 Aligned_cols=105 Identities=17% Similarity=0.309 Sum_probs=92.4
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
..|..++.++|++.+. +.+++++|+||++||++|+.+.|.|+++++++++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~P 79 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVL--KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD-KIEIVKLNIDEN-PGTA-AKYGVMSIP 79 (112)
T ss_dssp CCCEEECTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred ceEEecchhhHHHHHh--hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC-CeEEEEEEcCCC-HHHH-HhCCCCccc
Confidence 4688999999987653 4689999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 80 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 80 TLNVYQGGEV-AKTIVG-AKPKAAIVRDLEDF 109 (112)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHTHHH
T ss_pred EEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999988873 345555 68899999999865
No 36
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.75 E-value=1.1e-17 Score=139.81 Aligned_cols=105 Identities=21% Similarity=0.348 Sum_probs=93.2
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|.+++.++|++.+. ..+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~~-~~~~-~~~~v~~~P 81 (115)
T 1thx_A 7 KGVITITDAEFESEVL--KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD-RLKVVKLEIDPN-PTTV-KKYKVEGVP 81 (115)
T ss_dssp CSEEECCGGGHHHHTT--TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT-TCEEEEEESTTC-HHHH-HHTTCCSSS
T ss_pred CceEEeeccchhhHhh--cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC-cEEEEEEEcCCC-HHHH-HHcCCCcee
Confidence 4699999999998763 4789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 82 t~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 82 ALRLVKGEQI-LDSTEG-VISKDKLLSFLDTH 111 (115)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEcCCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999987773 344566 68999999999875
No 37
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.75 E-value=9.5e-18 Score=145.88 Aligned_cols=106 Identities=22% Similarity=0.359 Sum_probs=93.0
Q ss_pred CCeeecChhhHHHHHhhc---------CCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH
Q 012452 351 QNLVTLNRTGMENLARLD---------HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK 421 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~---------~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~ 421 (463)
..|..++.++|.+.+... ..++++||+||++||++|+.+.|.|+++++++++ ++.|+.||++.+ .+++
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~- 85 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG-QIVIYKVDTEKE-QELA- 85 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CEEEEEEeCCCC-HHHH-
Confidence 478999999999977521 1468999999999999999999999999999987 699999999999 9999
Q ss_pred HcCCCCCCCEEEEE-eCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 422 QKLQLGSFPTILFF-PKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~~~PTi~~f-~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|+|.++||+++| ++|+ .+.+.| ..+.++|.+||+++
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~--~~~~~G-~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGK--PEMAQG-AMPKASFKKAIDEF 124 (136)
T ss_dssp HHTTCCSSCEEEEECSSSC--CEEEES-CCCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCCc--EEEEeC-CCCHHHHHHHHHHH
Confidence 99999999999999 6666 446776 68999999999875
No 38
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.75 E-value=8.5e-18 Score=140.49 Aligned_cols=101 Identities=17% Similarity=0.278 Sum_probs=88.9
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
.....+.++|++.+. +++++||+|||+||++|+.+.|.|+++++++++ +.|+.||++.+ .+++ ++|+|.++||
T Consensus 8 ~~~~~~~~~f~~~~~---~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~-~~l~-~~~~v~~~Pt 80 (109)
T 3f3q_A 8 VTQFKTASEFDSAIA---QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDEL-GDVA-QKNEVSAMPT 80 (109)
T ss_dssp CEECCSHHHHHHHTT---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ccCCCCHHHHHHHHh---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHcCCCccCE
Confidence 445567889999886 799999999999999999999999999999976 99999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| . +.++|.++|+++
T Consensus 81 ~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 81 LLLFKNGKE-VAKVVG-A-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEEECCEE-EEEEeC-C-CHHHHHHHHHhh
Confidence 999997773 445555 3 779999999876
No 39
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.75 E-value=9.9e-18 Score=139.98 Aligned_cols=104 Identities=19% Similarity=0.352 Sum_probs=90.3
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC-CCcHHHHHHcCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d-~~~~~l~~~~~~I~~~ 429 (463)
+.|..++.++|++.+. ...+++++|+||++||++|+.+.|.|+++++.+++ +.|+.||++ .+ .+++ ++|+|.++
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~-~~~~-~~~~v~~~ 79 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRVV 79 (111)
T ss_dssp TSEEEECTTTHHHHHT-TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSBS
T ss_pred CccEEechHHHHHHHH-hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcch-HHHH-HHcCCCee
Confidence 5799999999999885 23588999999999999999999999999999976 999999999 56 8999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 80 PTFKILKENSV-VGEVTG-A-KYDKLLEAIQAA 109 (111)
T ss_dssp SEEEEESSSSE-EEEEES-S-CHHHHHHHHHHH
T ss_pred eEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHh
Confidence 99999988873 334555 3 589999999876
No 40
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.75 E-value=9.5e-18 Score=140.17 Aligned_cols=106 Identities=11% Similarity=0.293 Sum_probs=86.7
Q ss_pred CeeecCh-hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 352 NLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 352 ~V~~lt~-~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+|.+++. ++|++++.....+++++|+||++||++|+.+.|.|+++++++...++.|+.||++.+ ++++ ++|+|.++|
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~~P 78 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADEN-SEIS-ELFEISAVP 78 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccC-HHHH-HHcCCCccc
Confidence 3677887 999998862134899999999999999999999999999996444699999999999 9999 899999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 79 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 79 YFIIIHKGTI-LKELSG-A-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEEETTEE-EEEECS-C-CHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEecC-C-CHHHHHHHHHHH
Confidence 9999988873 345555 3 566799998864
No 41
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.75 E-value=1e-17 Score=136.96 Aligned_cols=101 Identities=21% Similarity=0.392 Sum_probs=90.7
Q ss_pred eeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012452 353 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 432 (463)
Q Consensus 353 V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi 432 (463)
|.+++.++|++.+. .+++++|+||++||++|+.+.|.++++++.+++ +.|+.+|++.+ ++++ ++|+|.++||+
T Consensus 1 V~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 73 (104)
T 2e0q_A 1 VIHLDSKNFDSFLA---SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDEN-PDIA-ARYGVMSLPTV 73 (104)
T ss_dssp CEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSCEE
T ss_pred CeecCHHHHHHHHh---cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCC-HHHH-HhCCccccCEE
Confidence 56889999999886 789999999999999999999999999999977 99999999999 9999 99999999999
Q ss_pred EEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 433 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 433 ~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|++|+. ...+.| ..+.++|.+||+++
T Consensus 74 ~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 74 IFFKDGEP-VDEIIG-AVPREEIEIRIKNL 101 (104)
T ss_dssp EEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEECCeE-hhhccC-CCCHHHHHHHHHHH
Confidence 99988773 345566 68999999999875
No 42
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.75 E-value=6e-18 Score=145.96 Aligned_cols=105 Identities=22% Similarity=0.359 Sum_probs=92.7
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|.+++.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 22 ~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 96 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGIP 96 (128)
T ss_dssp CCSEEECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT-TEEEEEEETTTC-CTTS-GGGTCCSSS
T ss_pred cccEecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCccC
Confidence 4689999999997652 4789999999999999999999999999999987 699999999999 8999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 97 t~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 97 TLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 126 (128)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCEE-EEEEcC-CCCHHHHHHHHHHh
Confidence 9999987773 345565 68999999999875
No 43
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.75 E-value=6.5e-18 Score=143.40 Aligned_cols=106 Identities=22% Similarity=0.446 Sum_probs=91.3
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|..++.++|++.+. +.++++||+||++||++|+.+.|.|+++++.+.+ ++.|+.||++.+ .+++ ++|+|.++|
T Consensus 3 ~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~P 77 (122)
T 3aps_A 3 QASIDLTPQTFNEKVL--QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAY-PQTC-QKAGIKAYP 77 (122)
T ss_dssp CCSEECCHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred cchhcCCHHHHHHHHh--cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCC-HHHH-HHcCCCccc
Confidence 4689999999976442 3789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| +..+.++|.+||+++
T Consensus 78 t~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 78 SVKLYQYERA-KKSIWEEQINSRDAKTIAALIYGK 111 (122)
T ss_dssp EEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHH
T ss_pred eEEEEeCCCc-cceeeccccCcCCHHHHHHHHHHH
Confidence 9999987775 334444 237999999999864
No 44
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.74 E-value=1.3e-17 Score=137.00 Aligned_cols=103 Identities=22% Similarity=0.409 Sum_probs=91.2
Q ss_pred eeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012452 353 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 432 (463)
Q Consensus 353 V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi 432 (463)
|..++.++|++.+. ..+++++|+||++||++|+.+.|.++++++++++ ++.|+.+|++.+ ++++ ++|+|.++||+
T Consensus 2 v~~~~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVL--ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG-KIAVYKLNTDEA-PGIA-TQYNIRSIPTV 76 (105)
T ss_dssp CEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSSEE
T ss_pred ceechhhhHHHHHh--cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC-ceEEEEEcCcch-HHHH-HhCCCCcccEE
Confidence 67889999999764 3688999999999999999999999999999987 699999999999 9999 99999999999
Q ss_pred EEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 433 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 433 ~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 77 LFFKNGER-KESIIG-AVPKSTLTDSIEKY 104 (105)
T ss_dssp EEEETTEE-EEEEEE-CCCHHHHHHHHHHH
T ss_pred EEEeCCeE-EEEEec-CCCHHHHHHHHHhh
Confidence 99988873 344555 68999999999875
No 45
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.74 E-value=2.8e-18 Score=144.25 Aligned_cols=106 Identities=25% Similarity=0.590 Sum_probs=94.9
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~--~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
+.|.+++.++|++.+. .+++++|+||++||++|+.+.|.|+++++.+++ .++.|+.+|++.+ .+++ ++|+|.+
T Consensus 7 ~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~ 81 (120)
T 1mek_A 7 DHVLVLRKSNFAEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE-SDLA-QQYGVRG 81 (120)
T ss_dssp TTEEECCTTTHHHHHH---HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC-CSSH-HHHTCCS
T ss_pred CCcEEechhhHHHHHc---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC-HHHH-HHCCCCc
Confidence 5799999999999886 789999999999999999999999999999874 3699999999998 8999 8999999
Q ss_pred CCEEEEEeCCCcC-eeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~-~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+.. ...+.| ..+.++|.+||+++
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~g-~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 82 YPTIKFFRNGDTASPKEYTA-GREADDIVNWLKKR 115 (120)
T ss_dssp SSEEEEEESSCSSSCEECCC-CSSHHHHHHHHHTT
T ss_pred ccEEEEEeCCCcCCcccccC-ccCHHHHHHHHHhc
Confidence 9999999988752 367776 68999999999875
No 46
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=1.5e-18 Score=149.58 Aligned_cols=108 Identities=27% Similarity=0.577 Sum_probs=94.8
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
..|..|+.++|+..+. +.++++||+|||+||++|+.+.|.|+++++.+.+ .++.|+.||++.+ ..++ ++|+|.++
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~-~~~~v~~~ 82 (133)
T 2dj3_A 7 GPVKVVVGKTFDAIVM--DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN-DITN-DQYKVEGF 82 (133)
T ss_dssp CSSEECCTTTCCCCCT--CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS-CCCC-SSCCCSSS
T ss_pred CceEEEcCCCHHHHhc--cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC-HHHH-hhcCCCcC
Confidence 5799999999998764 3589999999999999999999999999999984 3699999999998 8888 89999999
Q ss_pred CEEEEEeCCCcC-eeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~-~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+.. .+.|.||.++.++|.+||+++
T Consensus 83 Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 83 PTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp SEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHH
T ss_pred CEEEEEeCCCcccceEecCCCcCHHHHHHHHHHh
Confidence 999999988753 456776578999999999875
No 47
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.74 E-value=1.6e-18 Score=143.55 Aligned_cols=97 Identities=13% Similarity=0.155 Sum_probs=74.5
Q ss_pred ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEe
Q 012452 357 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP 436 (463)
Q Consensus 357 t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~ 436 (463)
+.++|++.+. .+++++|+|||+||++|+.+.|.+++++++++ ++.|+.||++.+ ++++ ++|+|.++||+++|+
T Consensus 7 ~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~-~~l~-~~~~v~~~Pt~~~~~ 79 (105)
T 4euy_A 7 TIEELATYIE---EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDM-QEIA-GRYAVFTGPTVLLFY 79 (105)
T ss_dssp ---CCSSSTT---CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC-----------CCCCEEEEEE
T ss_pred CHHHHHHHHh---cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCC-HHHH-HhcCCCCCCEEEEEe
Confidence 3466766664 78999999999999999999999999999985 599999999999 9999 999999999999999
Q ss_pred CCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 437 KHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 437 ~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|+. ...+.| ..+.++|.++|+++
T Consensus 80 ~G~~-~~~~~g-~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 80 NGKE-ILRESR-FISLENLERTIQLF 103 (105)
T ss_dssp TTEE-EEEEES-SCCHHHHHHHHHTT
T ss_pred CCeE-EEEEeC-CcCHHHHHHHHHHh
Confidence 8873 344555 78999999999875
No 48
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.74 E-value=1.2e-17 Score=139.27 Aligned_cols=105 Identities=18% Similarity=0.318 Sum_probs=90.4
Q ss_pred Ceeec-ChhhHHHHHhh-cCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 352 NLVTL-NRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 352 ~V~~l-t~~~f~~~i~~-~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
.|..+ +.++|++.+.. ...+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ .+++ ++|+|.++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~ 79 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAV-AAVA-EAAGITAM 79 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTT-HHHH-HHHTCCBS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCch-HHHH-HHcCCCcc
Confidence 57777 57899998862 11188999999999999999999999999999986 799999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 80 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 80 PTFHVYKDGVK-ADDLVG-A-SQDKLKALVAKH 109 (112)
T ss_dssp SEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred cEEEEEECCeE-EEEEcC-C-CHHHHHHHHHHH
Confidence 99999988874 345556 5 899999999875
No 49
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.74 E-value=1.9e-17 Score=137.31 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=86.6
Q ss_pred eeec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 353 LVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 353 V~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
|.++ +.++|++.+. .+.+++++|+||++||++|+.+.|.|++++++++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 3 v~~i~~~~~~~~~~~-~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~-~~~~-~~~~v~~~Pt 77 (107)
T 1gh2_A 3 VKPVGSDPDFQPELS-GAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQC-QGTA-ATNNISATPT 77 (107)
T ss_dssp EEEECSGGGHHHHHH-HTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSSSE
T ss_pred eEEecCHHHHHHHHH-hCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccC-HHHH-HhcCCCcccE
Confidence 5556 5689999884 2368999999999999999999999999999994 599999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 78 FQFFRNKVR-IDQYQG--ADAVGLEEKIKQH 105 (107)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEECCeE-EEEEeC--CCHHHHHHHHHHh
Confidence 999988873 344555 4556799999874
No 50
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.74 E-value=1.4e-17 Score=157.92 Aligned_cols=105 Identities=24% Similarity=0.541 Sum_probs=96.0
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCC--CeEEEEEEcCCCcHHHHHHcCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN--GVKVGKFRADGDQKEYAKQKLQLG 427 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~--~v~f~~VD~d~~~~~l~~~~~~I~ 427 (463)
.+.|..|++++|++++. ++++++|+|||+||++|+.+.|.|+++++.+++. ++.|+.||++.+ .+++ ++|+|.
T Consensus 14 ~~~v~~l~~~~~~~~~~---~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~-~~l~-~~~~v~ 88 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSA-SVLA-SRFDVS 88 (241)
T ss_dssp ETTEEEECTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTTCC
T ss_pred CCCcEEecccCHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCC-HHHH-HhcCCC
Confidence 46899999999999886 7899999999999999999999999999999873 399999999999 9999 999999
Q ss_pred CCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++||+++|++|+ .+.|.| .++.++|.+||+++
T Consensus 89 ~~Pt~~~~~~g~--~~~~~g-~~~~~~l~~~i~~~ 120 (241)
T 3idv_A 89 GYPTIKILKKGQ--AVDYEG-SRTQEEIVAKVREV 120 (241)
T ss_dssp SSSEEEEEETTE--EEECCS-CSCHHHHHHHHHHH
T ss_pred cCCEEEEEcCCC--cccccC-cccHHHHHHHHhhc
Confidence 999999999887 567887 69999999999864
No 51
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.73 E-value=1.2e-17 Score=163.25 Aligned_cols=107 Identities=18% Similarity=0.372 Sum_probs=94.9
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
.+.|+++|.++|++++. .+.+++|||+|||+||++|+.+.|.|+++++++++ ++.|++||++.+ ++++ ++|+|.++
T Consensus 6 ~~~v~~~~~~~f~~~~~-~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~ 81 (287)
T 3qou_A 6 VENIVNINESNLQQVLE-QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG-QFILAKLDCDAE-QMIA-AQFGLRAI 81 (287)
T ss_dssp CTTEEECCTTTHHHHHT-TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS-SSEEEEEETTTC-HHHH-HTTTCCSS
T ss_pred CCccEECCHHHHHHHHH-hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC-CeEEEEEeCccC-HHHH-HHcCCCCC
Confidence 45799999999999775 33589999999999999999999999999999987 799999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| ..+.+.|.+||+.+
T Consensus 82 Pt~~~~~~G~~-~~~~~g-~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 82 PTVYLFQNGQP-VDGFQG-PQPEEAIRALLDXV 112 (287)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CeEEEEECCEE-EEEeeC-CCCHHHHHHHHHHH
Confidence 99999998873 345665 78999999999764
No 52
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.73 E-value=1.8e-17 Score=140.12 Aligned_cols=105 Identities=20% Similarity=0.371 Sum_probs=92.6
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
..|..++.++|.+.+. +.++++||+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 12 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~i~~~P 86 (121)
T 2i1u_A 12 SATIKVTDASFATDVL--SSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDTN-PETA-RNFQVVSIP 86 (121)
T ss_dssp CCSEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred ccceecCHHHHHHHHH--hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhcCCCcCC
Confidence 4789999999988653 3688999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 87 t~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 87 TLILFKDGQP-VKRIVG-AKGKAALLRELSDV 116 (121)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHTCSC
T ss_pred EEEEEECCEE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999998873 345666 68899999998764
No 53
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.73 E-value=2.2e-17 Score=138.29 Aligned_cols=102 Identities=18% Similarity=0.298 Sum_probs=91.2
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+....++.++|+++++ .++++||+||++||++|+.+.|.|+++++++++ +.|+.||++.+ ++++ ++|+|.++|
T Consensus 9 ~~~~~~~~~~f~~~~~---~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~-~~~~-~~~~v~~~P 81 (112)
T 1syr_A 9 MVKIVTSQAEFDSIIS---QNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEV-SEVT-EKENITSMP 81 (112)
T ss_dssp CCEEECSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred eEEEECCHHHHHHHHc---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCC-HHHH-HHcCCCccc
Confidence 4677889999999987 789999999999999999999999999999875 99999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| . +.++|.++|+++
T Consensus 82 t~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 82 TFKVYKNGSS-VDTLLG-A-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEEETTEE-EEEEES-C-CHHHHHHHHHTT
T ss_pred EEEEEECCcE-EEEEeC-C-CHHHHHHHHHHh
Confidence 9999998873 345555 5 999999999875
No 54
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.73 E-value=2.9e-17 Score=139.91 Aligned_cols=105 Identities=21% Similarity=0.400 Sum_probs=90.9
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC-CCcHHHHHHcCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d-~~~~~l~~~~~~I~~~ 429 (463)
..|..++.++|++.+. ...+++++|+||++||++|+.+.|.++++++++++ +.|+.||++ .+ .+++ ++|+|.++
T Consensus 18 ~~v~~l~~~~~~~~~~-~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~-~~~~-~~~~v~~~ 92 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQEN-KTLA-KELGIRVV 92 (124)
T ss_dssp TSEEEECTTTHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTT-HHHH-HHHCCSSS
T ss_pred CceEEecchhHHHHHH-hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcch-HHHH-HHcCCCee
Confidence 4789999999999876 34688999999999999999999999999999975 999999998 56 8999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHhC
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 463 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l~ 463 (463)
||+++|++|+. ...+.| . ..++|.++|++++
T Consensus 93 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 PTFKILKENSV-VGEVTG-A-KYDKLLEAIQAAR 123 (124)
T ss_dssp SEEEEEETTEE-EEEEES-S-CHHHHHHHHHHHT
T ss_pred eEEEEEeCCcE-EEEEcC-C-CHHHHHHHHHHhh
Confidence 99999998873 344555 3 4899999999864
No 55
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.73 E-value=3.6e-17 Score=134.68 Aligned_cols=103 Identities=18% Similarity=0.363 Sum_probs=89.5
Q ss_pred eeecCh-hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 353 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 353 V~~lt~-~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
|.++++ ++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 2 v~~l~~~~~~~~~l~-~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 77 (106)
T 1xwb_A 2 VYQVKDKADLDGQLT-KASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDEC-EDIA-MEYNISSMPT 77 (106)
T ss_dssp EEECCSHHHHHHHHH-HHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred ceecCCHHHHHHHHH-hcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccch-HHHH-HHcCCCcccE
Confidence 567877 88998875 23688999999999999999999999999999975 699999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 78 ~~~~~~G~~-~~~~~g--~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 78 FVFLKNGVK-VEEFAG--ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEETTEE-EEEEES--CCHHHHHHHHHHT
T ss_pred EEEEcCCcE-EEEEcC--CCHHHHHHHHHHh
Confidence 999998873 344554 6889999999875
No 56
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.72 E-value=1.3e-17 Score=141.15 Aligned_cols=105 Identities=25% Similarity=0.552 Sum_probs=90.7
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC----CCeEEEEEEcCCCcHHHHHHcCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQKEYAKQKLQ 425 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~----~~v~f~~VD~d~~~~~l~~~~~~ 425 (463)
+..|..|+.++|++.+. .+++++||+|||+||++|+.+.|.|+++++++++ .++.|+.||++.+ . ++ + +
T Consensus 6 ~~~v~~l~~~~f~~~v~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~-~~-~--~ 78 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVL--DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN-D-VP-D--E 78 (121)
T ss_dssp SCSSEECCTTTTTTSSS--CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS-C-CS-S--C
T ss_pred CCCeEEecccCHHHHhh--cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc-c-cc-c--c
Confidence 35789999999998752 3789999999999999999999999999999975 2699999999988 3 66 4 9
Q ss_pred CCCCCEEEEEeCCCcC-eeecCCCCCCHHHHHHHHHHh
Q 012452 426 LGSFPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 I~~~PTi~~f~~g~~~-~~~y~gg~~~~~~L~~fI~~l 462 (463)
|.++||+++|++|+.. ...+.| .++.++|.+||+++
T Consensus 79 v~~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 IQGFPTIKLYPAGAKGQPVTYSG-SRTVEDLIKFIAEN 115 (121)
T ss_dssp CSSSSEEEEECSSCTTSCCCCCC-CSCHHHHHHHHHHT
T ss_pred cCcCCeEEEEeCcCCCCceEecC-CCCHHHHHHHHHhc
Confidence 9999999999988653 566776 79999999999875
No 57
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.72 E-value=4.3e-17 Score=134.10 Aligned_cols=101 Identities=20% Similarity=0.358 Sum_probs=87.7
Q ss_pred eec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012452 354 VTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTI 432 (463)
Q Consensus 354 ~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi 432 (463)
.++ +.++|++.+. ...+++++|+||++||++|+.+.|.++++++++++ +.|+.||++.+ ++++ ++|+|.++||+
T Consensus 3 ~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~Pt~ 77 (105)
T 3m9j_A 3 KQIESKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDC-QDVA-SESEVKSMPTF 77 (105)
T ss_dssp EECCSHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTC-HHHH-HHTTCCBSSEE
T ss_pred EEcCCHHHHHHHHH-hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhh-HHHH-HHcCCCcCcEE
Confidence 344 5678888875 33689999999999999999999999999999976 99999999999 9999 99999999999
Q ss_pred EEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 433 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 433 ~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|++|+. ...+.| . +.++|.++|+++
T Consensus 78 ~~~~~g~~-~~~~~g-~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 78 QFFKKGQK-VGEFSG-A-NKEKLEATINEL 104 (105)
T ss_dssp EEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred EEEECCeE-EEEEeC-C-CHHHHHHHHHHh
Confidence 99988873 345555 5 999999999875
No 58
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.72 E-value=2e-17 Score=141.12 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=85.0
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
.|.+++.++|.+.+...+.+++++|+|||+||++|+.|.|.|++++++|.+ +.|++||+++. + ++|+|.++||
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~----~-~~~~v~~~PT 76 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSC----I-QHYHDNCLPT 76 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGT----S-TTCCGGGCSE
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHh----H-HHCCCCCCCE
Confidence 588899999999775222244999999999999999999999999999975 99999999976 4 7999999999
Q ss_pred EEEEeCCCcCeeecC------CCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYP------SERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~------gg~~~~~~L~~fI~~l 462 (463)
+++|++|+.. ..+. |...+.++|..+|.+.
T Consensus 77 ~~~fk~G~~v-~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 77 IFVYKNGQIE-AKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEEEETTEEE-EEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEEEECCEEE-EEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 9999999852 2222 2246899999998753
No 59
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.72 E-value=5.7e-17 Score=151.65 Aligned_cols=104 Identities=24% Similarity=0.558 Sum_probs=94.9
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
..|..++.++|+..+. .++++||+|||+||++|+.+.|.|+++++.+++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 97 ~~v~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 170 (210)
T 3apq_A 97 PEIITLERREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNSYP 170 (210)
T ss_dssp TTSEECCHHHHHHHHH---HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT-TBEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CceEEecHHHHHHHHc---cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC-ceEEEEEECCcc-HHHH-HHcCCCcCC
Confidence 5789999999999886 789999999999999999999999999999987 799999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 171 t~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 200 (210)
T 3apq_A 171 SLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 200 (210)
T ss_dssp EEEEECTTSC-CEECCS-CCCHHHHHHHHHHH
T ss_pred eEEEEECCCc-eeEecC-CCCHHHHHHHHHHh
Confidence 9999988874 566776 79999999999864
No 60
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.72 E-value=6.4e-17 Score=132.68 Aligned_cols=102 Identities=20% Similarity=0.394 Sum_probs=87.5
Q ss_pred eeecCh-hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 353 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 353 V~~lt~-~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
|.+++. ++|++.+. ...+++++|+||++||++|+.+.|.++++++.+++ +.|+.||++.+ ++++ ++|+|.++||
T Consensus 1 v~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~~Pt 75 (104)
T 2vim_A 1 MRVLATAADLEKLIN-ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPE--VEFAKVDVDQN-EEAA-AKYSVTAMPT 75 (104)
T ss_dssp CEECCSHHHHHHHHH-TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSSSE
T ss_pred CeecCCHHHHHHHHH-hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCC--CEEEEEeccCC-HHHH-HHcCCccccE
Confidence 345665 88998875 23688999999999999999999999999999864 99999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| .+.++|.++|+++
T Consensus 76 ~~~~~~g~~-~~~~~G--~~~~~l~~~l~~~ 103 (104)
T 2vim_A 76 FVFIKDGKE-VDRFSG--ANETKLRETITRH 103 (104)
T ss_dssp EEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred EEEEeCCcE-EEEEeC--CCHHHHHHHHHhh
Confidence 999998873 334444 5899999999876
No 61
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.72 E-value=3e-17 Score=145.58 Aligned_cols=103 Identities=9% Similarity=0.208 Sum_probs=87.4
Q ss_pred cChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEE
Q 012452 356 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFF 435 (463)
Q Consensus 356 lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f 435 (463)
.+.++|++.+. .+.++++||+|||+||++|+.+.|.|+++++++++ .+.|+.||++++ ++++ ++|+|.++||+++|
T Consensus 9 ~~~~~~~~~i~-~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~-~~~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~ 84 (149)
T 3gix_A 9 TSKKEVDQAIK-STAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK-MAAIYLVDVDQT-AVYT-QYFDISYIPSTVFF 84 (149)
T ss_dssp CSHHHHHHHHH-HCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT-TEEEEEEETTTC-CHHH-HHTTCCSSSEEEEE
T ss_pred CCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCcC-HHHH-HHcCCCccCeEEEE
Confidence 36788988874 23689999999999999999999999999999987 699999999999 9999 99999999999999
Q ss_pred eCCCcCe--------eecCCCCCCHHHHHHHHHHh
Q 012452 436 PKHSSKP--------IKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 436 ~~g~~~~--------~~y~gg~~~~~~L~~fI~~l 462 (463)
++|+... ..+.|...+.++|.++|+++
T Consensus 85 ~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 85 FNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp ETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred ECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 9998320 23333257889999999865
No 62
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.71 E-value=5.4e-17 Score=136.88 Aligned_cols=102 Identities=20% Similarity=0.394 Sum_probs=89.0
Q ss_pred CeeecCh-hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 352 NLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 352 ~V~~lt~-~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
.+.+++. ++|++.+. ...+++++|+||++||++|+.+.|.|+++++++ ++.|+.||++.+ ++++ ++|+|.++|
T Consensus 14 ~v~~l~~~~~~~~~l~-~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~-~~~~-~~~~v~~~P 87 (117)
T 2xc2_A 14 ELIELKQDGDLESLLE-QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKL-EETA-RKYNISAMP 87 (117)
T ss_dssp EEEECCSTTHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTS-HHHH-HHTTCCSSS
T ss_pred eeEEeCCHHHHHHHHH-hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCcc-HHHH-HHcCCCccc
Confidence 4888887 89999876 336899999999999999999999999999888 499999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| .+.++|.++|+++
T Consensus 88 t~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 88 TFIAIKNGEK-VGDVVG--ASIAKVEDMIKKF 116 (117)
T ss_dssp EEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred eEEEEeCCcE-EEEEeC--CCHHHHHHHHHHh
Confidence 9999988873 334555 5889999999875
No 63
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.71 E-value=7.4e-17 Score=136.83 Aligned_cols=105 Identities=18% Similarity=0.250 Sum_probs=90.6
Q ss_pred CCeeecChhhHHHHHhh-cCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 351 QNLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~-~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
+.+..++.++|++.+.. ...+++++|+||++||++|+.+.|.|+++++++++ +.|+.||++.+ ++++ ++|+|.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~-~~~~-~~~~v~~~ 88 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDEL-KPIA-EQFSVEAM 88 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCC-HHHH-HHcCCCcc
Confidence 35777899999998862 12588999999999999999999999999999976 99999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| .. .++|.+||+++
T Consensus 89 Pt~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 89 PTFLFMKEGDV-KDRVVG-AI-KEELTAKVGLH 118 (122)
T ss_dssp SEEEEEETTEE-EEEEES-SC-HHHHHHHHHHH
T ss_pred cEEEEEeCCEE-EEEEeC-cC-HHHHHHHHHHH
Confidence 99999988873 345666 45 99999999875
No 64
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.71 E-value=7.4e-17 Score=159.40 Aligned_cols=106 Identities=23% Similarity=0.485 Sum_probs=95.1
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d--~~~~~l~~~~~~I~~ 428 (463)
..|++|+.++|++++. +.++++||+|||+||++|+.+.|.|+++++.+.+ .+.|+.|||| .+ .++| ++|+|.+
T Consensus 17 ~~vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~-~~~~~~v~~d~~~~-~~l~-~~~~I~~ 91 (298)
T 3ed3_A 17 PHISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG-VVQVAAVNCDLNKN-KALC-AKYDVNG 91 (298)
T ss_dssp TTCEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTSTTT-HHHH-HHTTCCB
T ss_pred CCeEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC-CcEEEEEEccCccC-HHHH-HhCCCCc
Confidence 4799999999999884 4688999999999999999999999999999987 6999999998 55 8999 9999999
Q ss_pred CCEEEEEeCCCc----------------CeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSS----------------KPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~----------------~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. ....|.| .++.+.|.+||.+.
T Consensus 92 ~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G-~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 92 FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSG-ARTLAPIVDFSLSR 140 (298)
T ss_dssp SSEEEEEECCCC-------------CCCEEEECCS-CCSHHHHHHHHHTT
T ss_pred cceEEEEECCceeecccccccccccccccceeecC-CcCHHHHHHHHHHh
Confidence 999999999861 2578887 79999999999764
No 65
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=3.7e-18 Score=148.54 Aligned_cols=104 Identities=16% Similarity=0.424 Sum_probs=87.1
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCC---
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG--- 427 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~--- 427 (463)
..|..++.++|++.+. .+.++++||+|||+||++|+.+.|.|+++++++++.++.|+.||++.+ ++++ ++|+|.
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~-~~~~-~~~~v~~~~ 83 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRY-TDVS-TRYKVSTSP 83 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTC-HHHH-HHTTCCCCS
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccC-HHHH-HHccCcccC
Confidence 4689999999999885 445569999999999999999999999999999865799999999999 9999 999999
Q ss_pred ---CCCEEEEEeCCCcCeeecCCCCCCHHHHHHHH
Q 012452 428 ---SFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 459 (463)
Q Consensus 428 ---~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI 459 (463)
++||+++|++|+. ...+.| ..+.++|.+||
T Consensus 84 ~~~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l 116 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKE-AMRRPQ-IDKKGRAVSWT 116 (137)
T ss_dssp SSSCSSEEEEESSSSE-EEEESC-BCSSSCBCCCC
T ss_pred CcCCCCEEEEEECCEE-EEEecC-cCchHHHHHHH
Confidence 9999999988874 334554 55555554444
No 66
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.71 E-value=7.9e-17 Score=138.03 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=89.6
Q ss_pred CCeeec-ChhhHHHHHhhc-CCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~-~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
..|.++ +.++|++.+... ..++++||+||++||++|+.+.|.|+++++++++ +.|+.||++.+ .+++ ++|+|.+
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~--v~~~~vd~d~~-~~l~-~~~~v~~ 91 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPN--VLFLKVDTDEL-KSVA-SDWAIQA 91 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSS--EEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECccC-HHHH-HHcCCCc
Confidence 357777 678999887632 2588999999999999999999999999999874 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 92 ~Pt~~~~~~G~~-~~~~~G--~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 92 MPTFMFLKEGKI-LDKVVG--AKKDELQSTIAKH 122 (124)
T ss_dssp SSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred cCEEEEEECCEE-EEEEeC--CCHHHHHHHHHHh
Confidence 999999988873 334444 4899999999875
No 67
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.71 E-value=6.4e-17 Score=164.38 Aligned_cols=106 Identities=20% Similarity=0.244 Sum_probs=94.4
Q ss_pred CCCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhH------HHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHH
Q 012452 349 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAME------GSYVELADKLAGNGVKVGKFRADGDQKEYAKQ 422 (463)
Q Consensus 349 ~~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~------p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~ 422 (463)
..+.|+.|+.++|++++. .+++|||+||||||++|+... |.|+++++.+++.++.|++|||+.+ +++| +
T Consensus 11 ~~~~v~~lt~~~f~~~i~---~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~-~~l~-~ 85 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFK---KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD-AAVA-K 85 (367)
T ss_dssp CCCCCEECCTTTHHHHHH---HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT-HHHH-H
T ss_pred CCCccEECCHHHHHHHHh---hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc-HHHH-H
Confidence 346899999999999986 689999999999999974433 6899999999875699999999999 9999 9
Q ss_pred cCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 423 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|+|+++||+++|++|+ ++.|.| .++.+.|.+||++.
T Consensus 86 ~~~V~~~PTl~~f~~G~--~~~y~G-~~~~~~i~~~i~~~ 122 (367)
T 3us3_A 86 KLGLTEEDSIYVFKEDE--VIEYDG-EFSADTLVEFLLDV 122 (367)
T ss_dssp HHTCCSTTEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred HcCCCcCceEEEEECCc--EEEeCC-CCCHHHHHHHHHHh
Confidence 99999999999999987 678988 69999999999763
No 68
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.71 E-value=1.8e-17 Score=142.41 Aligned_cols=88 Identities=18% Similarity=0.360 Sum_probs=79.8
Q ss_pred CCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCC
Q 012452 369 HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSE 448 (463)
Q Consensus 369 ~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg 448 (463)
..+++++|+|||+||++|+.+.|.++++++++++ ++.|+.||++.+ ++++ ++|+|.++||+++|++|+. ...+.|
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G- 114 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDKN-ESLA-RKFSVKSLPTIILLKNKTM-LARKDH- 114 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGGC-HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HHcCCCCcCEEEEEECCEE-EEEecC-
Confidence 3789999999999999999999999999999986 799999999999 9999 9999999999999988773 445555
Q ss_pred CCCHHHHHHHHHH
Q 012452 449 RRDVDSLMAFVDA 461 (463)
Q Consensus 449 ~~~~~~L~~fI~~ 461 (463)
..+.++|.+||++
T Consensus 115 ~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 115 FVSSNDLIALIKK 127 (128)
T ss_dssp CCCHHHHHHHHTT
T ss_pred CCCHHHHHHHHHh
Confidence 7999999999975
No 69
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.70 E-value=6.7e-17 Score=140.98 Aligned_cols=104 Identities=23% Similarity=0.345 Sum_probs=77.9
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
..+.+++.++|+..+. +.++ +||+||++||++|+.+.|.|+++++++++ ++.|+.||++.+ .+++ ++|+|.++|
T Consensus 33 ~~v~~l~~~~~~~~~~--~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 106 (140)
T 1v98_A 33 PWVVEADEKGFAQEVA--GAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG-RLKVVKVNVDEH-PGLA-ARYGVRSVP 106 (140)
T ss_dssp ------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CccccCCHHHHHHHHH--cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC-ceEEEEEECCCC-HHHH-HHCCCCccC
Confidence 4688899999998775 2344 99999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 107 t~~~~~~G~~-~~~~~G-~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 107 TLVLFRRGAP-VATWVG-ASPRRVLEERLRPY 136 (140)
T ss_dssp EEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred EEEEEeCCcE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999988873 344555 68999999999875
No 70
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.70 E-value=4.6e-17 Score=166.18 Aligned_cols=106 Identities=22% Similarity=0.484 Sum_probs=92.2
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-----CCeEEEEEEcCCCcHHHHHHcCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-----NGVKVGKFRADGDQKEYAKQKLQ 425 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-----~~v~f~~VD~d~~~~~l~~~~~~ 425 (463)
+.|..|++++|++++. .+++|||+|||+||++|+.+.|.|+++++.+++ .++.|++|||+.+ .++| ++|+
T Consensus 5 ~~v~~l~~~~f~~~~~---~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~-~~l~-~~~~ 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILN---NADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQH-SDIA-QRYR 79 (382)
T ss_dssp ---CBCCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTC-HHHH-HHTT
T ss_pred CceEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCcc-HHHH-HhcC
Confidence 3688999999999886 689999999999999999999999999999942 2599999999999 9999 9999
Q ss_pred CCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 426 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|.++||+++|++|+.....|.| .++.+.|.+||++.
T Consensus 80 v~~~Pt~~~f~~G~~~~~~~~G-~~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 80 ISKYPTLKLFRNGMMMKREYRG-QRSVKALADYIRQQ 115 (382)
T ss_dssp CCEESEEEEEETTEEEEEECCS-CCSHHHHHHHHHHH
T ss_pred CCcCCEEEEEeCCcEeeeeecC-cchHHHHHHHHHHh
Confidence 9999999999998842225887 79999999999864
No 71
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.70 E-value=7.3e-17 Score=136.16 Aligned_cols=101 Identities=20% Similarity=0.338 Sum_probs=86.2
Q ss_pred CeeecC-hhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 352 NLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 352 ~V~~lt-~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
.+..++ .++|+++++ .++++||+||++||++|+.+.|.|+++++++++ +.|+.||++.+ ++++ ++|+|.++|
T Consensus 13 ~~~~~~~~~~~~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~-~~l~-~~~~v~~~P 85 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIK---QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDES-PDIA-KECEVTAMP 85 (114)
T ss_dssp GSCBCCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTC-HHHH-HHTTCCSBS
T ss_pred heeecCCHHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCC-HHHH-HHCCCCccc
Confidence 344454 466777776 789999999999999999999999999999976 99999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.| .. .++|.++|+++
T Consensus 86 t~~~~~~G~~-~~~~~G-~~-~~~l~~~l~~~ 114 (114)
T 2oe3_A 86 TFVLGKDGQL-IGKIIG-AN-PTALEKGIKDL 114 (114)
T ss_dssp EEEEEETTEE-EEEEES-SC-HHHHHHHHHTC
T ss_pred EEEEEeCCeE-EEEEeC-CC-HHHHHHHHHhC
Confidence 9999988873 345666 45 89999999864
No 72
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.70 E-value=8.7e-17 Score=142.80 Aligned_cols=104 Identities=26% Similarity=0.398 Sum_probs=88.7
Q ss_pred CCeeecC-hhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 351 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~lt-~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
..+..++ .++|++++. ...++++||+||++||++|+.+.|.|++++++++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 12 ~~v~~l~~~~~~~~~~~-~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~ 86 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLR-LKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGV-PEVS-EKYEISSV 86 (153)
T ss_dssp CCSEEECSHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTS-HHHH-HHTTCCSS
T ss_pred CCeEEcCCHHHHHHHHH-hcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCC-HHHH-HHcCCCCC
Confidence 4677786 689999886 2238999999999999999999999999999985 499999999999 9999 89999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 87 Pt~~~~~~G~~-~~~~~G--~~~~~l~~~i~~~ 116 (153)
T 2wz9_A 87 PTFLFFKNSQK-IDRLDG--AHAPELTKKVQRH 116 (153)
T ss_dssp SEEEEEETTEE-EEEEES--SCHHHHHHHHHHH
T ss_pred CEEEEEECCEE-EEEEeC--CCHHHHHHHHHHH
Confidence 99999997763 334444 5788999999875
No 73
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.70 E-value=1.5e-17 Score=142.49 Aligned_cols=105 Identities=23% Similarity=0.394 Sum_probs=86.8
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCCh--------------hHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ--------------FCQAMEGSYVELADKLAGNGVKVGKFRADGDQ 416 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~--------------~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~ 416 (463)
+.|.+++.++|++.+. +.+++++|+|||+||+ +|+.+.|.|+++++++++ ++.|++||++.+
T Consensus 3 ~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~-~~~~~~vd~d~~- 78 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN- 78 (123)
T ss_dssp CSCEECCSTTHHHHTT--SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSC-
T ss_pred CccEecChhhHHHHHH--hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC-CeEEEEEECCCC-
Confidence 4688999999987653 4789999999999999 999999999999999987 699999999999
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++++ ++|+|.++||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 79 ~~l~-~~~~v~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 79 PGTA-PKYGIRGIPTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 121 (123)
T ss_dssp TTTG-GGGTCCBSSEEEEEESSSE-EEEEES-CCCHHHHHHHHTTT
T ss_pred HHHH-HHcCCCccCEEEEEECCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999 9999999999999988873 345666 68999999999865
No 74
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.70 E-value=8e-17 Score=152.10 Aligned_cols=106 Identities=24% Similarity=0.397 Sum_probs=94.5
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
...+..+|.++|++.+. +.++++||+|||+||++|+.+.|.|+++++++++ ++.|+.||++.+ ++++ ++|+|.++
T Consensus 11 ~~~~~~lt~~~f~~~v~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~l~-~~~~v~~~ 85 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG-KLTVAKLNIDQN-PGTA-PKYGIRGI 85 (222)
T ss_dssp SCCCEECCTTTHHHHHT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTTC-TTTG-GGGTCCSB
T ss_pred CCCceeCCHHHHHHHHH--hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC-CcEEEEEECCCC-HHHH-HHcCCCcC
Confidence 35799999999998542 3789999999999999999999999999999987 699999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 86 Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 116 (222)
T 3dxb_A 86 PTLLLFKNGEV-AATKVG-ALSKGQLKEFLDAN 116 (222)
T ss_dssp SEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE-EEEecc-ccChHHHHHHHHhh
Confidence 99999998874 445666 78999999999875
No 75
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.69 E-value=5.9e-17 Score=135.59 Aligned_cols=101 Identities=15% Similarity=0.249 Sum_probs=86.8
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
.+..++.++| +.+. .+++++|+||++||++|+.+.|.|+++++.+.+ +.|+.||++.+ .+++ ++|+|.++||
T Consensus 4 ~~~~~~~~~f-~~~~---~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~-~~l~-~~~~v~~~Pt 75 (110)
T 2l6c_A 4 IRDITTEAGM-AHFE---GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQ--VAISSVDSEAR-PELM-KELGFERVPT 75 (110)
T ss_dssp CSBCGGGCSH-HHHT---TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTT--SCEEEEEGGGC-HHHH-HHTTCCSSCE
T ss_pred eeecCCHHHH-HHHH---cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCC--cEEEEEcCcCC-HHHH-HHcCCcccCE
Confidence 3456788899 5554 679999999999999999999999999988864 99999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| ..+.++|.++|++.
T Consensus 76 ~~~~~~G~~-v~~~~G-~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 76 LVFIRDGKV-AKVFSG-IMNPRELQALYASI 104 (110)
T ss_dssp EEEEESSSE-EEEEES-CCCHHHHHHHHHTC
T ss_pred EEEEECCEE-EEEEcC-CCCHHHHHHHHHHH
Confidence 999988874 345555 78999999999864
No 76
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.69 E-value=1.7e-16 Score=167.60 Aligned_cols=106 Identities=19% Similarity=0.503 Sum_probs=97.2
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|..|+.++|++++. .++++||+||||||++|+.+.|.|+++++.+++.++.|++|||+.+ +++| ++|+|.++|
T Consensus 14 ~~v~~l~~~~f~~~~~---~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~P 88 (504)
T 2b5e_A 14 SAVVKLATDSFNEYIQ---SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTEN-QDLC-MEHNIPGFP 88 (504)
T ss_dssp SSCEECCTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTC-HHHH-HHTTCCSSS
T ss_pred CCcEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HhcCCCcCC
Confidence 5799999999999886 7899999999999999999999999999999874599999999999 9999 999999999
Q ss_pred EEEEEeCCCcC-eeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~-~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+.. ...|.| .++.+.|.+||++.
T Consensus 89 t~~~~~~g~~~~~~~~~G-~~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 89 SLKIFKNSDVNNSIDYEG-PRTAEAIVQFMIKQ 120 (504)
T ss_dssp EEEEEETTCTTCEEECCS-CCSHHHHHHHHHHH
T ss_pred EEEEEeCCccccceeecC-CCCHHHHHHHHHHh
Confidence 99999998843 677887 79999999999864
No 77
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.69 E-value=1.2e-16 Score=140.53 Aligned_cols=102 Identities=13% Similarity=0.187 Sum_probs=84.1
Q ss_pred ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEe
Q 012452 357 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP 436 (463)
Q Consensus 357 t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~ 436 (463)
+.++|++.+. ...+++++|+|||+||++|+.+.|.|+++++++.+ ++.|+.||++++ ++++ ++|+|.++||+++|+
T Consensus 10 ~~~~~~~~v~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-~v~~~~vd~d~~-~~~~-~~~~i~~~Pt~~~~~ 85 (142)
T 1qgv_A 10 NGWQVDQAIL-SEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN-FAVIYLVDITEV-PDFN-KMYELYDPCTVMFFF 85 (142)
T ss_dssp SHHHHHHHHH-TCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TEEEEEEETTTC-CTTT-TSSCSCSSCEEEEEE
T ss_pred CHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CeEEEEEccccC-HHHH-HHcCCCCCCEEEEEE
Confidence 5688887664 12589999999999999999999999999999977 699999999999 8999 999999999999999
Q ss_pred CCCcCee--------ecCCCCCCHHHHHHHHHHh
Q 012452 437 KHSSKPI--------KYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 437 ~g~~~~~--------~y~gg~~~~~~L~~fI~~l 462 (463)
+|+.... ...|...+.++|.++|+++
T Consensus 86 ~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 86 RNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp TTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 9884322 2333222488999988764
No 78
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.69 E-value=5.8e-17 Score=137.99 Aligned_cols=104 Identities=18% Similarity=0.358 Sum_probs=90.1
Q ss_pred CCeeecCh-hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 351 QNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~lt~-~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
..+..++. ++|++++. .++++||+||++||++|+.+.|.|+++++.+++.++.|+.||++.+ ++++ ++|+|.++
T Consensus 15 ~~~~~i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~-~~~~-~~~~v~~~ 89 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ-SQIA-QEVGIRAM 89 (121)
T ss_dssp CCEEECCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTC-HHHH-HHHTCCSS
T ss_pred cceEEcCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCC-HHHH-HHcCCCcc
Confidence 46677755 88999874 7899999999999999999999999999988763499999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| . +.++|.+||+++
T Consensus 90 Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 90 PTFVFFKNGQK-IDTVVG-A-DPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTEE-EEEEES-S-CHHHHHHHHHHH
T ss_pred cEEEEEECCeE-EeeEcC-C-CHHHHHHHHHHh
Confidence 99999998873 345555 5 899999999876
No 79
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.69 E-value=8e-17 Score=162.40 Aligned_cols=104 Identities=13% Similarity=0.183 Sum_probs=94.9
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHH-------HHHHHHHhcCCCeEEEEEEcCCCcHHHHHH
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGS-------YVELADKLAGNGVKVGKFRADGDQKEYAKQ 422 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~-------l~~la~~~~~~~v~f~~VD~d~~~~~l~~~ 422 (463)
.+.|++|+.++|++.+. .+++|||+||||||+ |+.+.|. |+++++.+++.++.|++|||+.+ +++| +
T Consensus 10 ~~~v~~l~~~~f~~~i~---~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~-~~l~-~ 83 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLK---KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKE-AKLA-K 83 (350)
T ss_dssp CCCCEEECHHHHHHHHT---TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTT-HHHH-H
T ss_pred CCccEECCHHHHHHHHh---hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCC-HHHH-H
Confidence 35799999999999886 689999999999999 9999888 99999999865699999999999 9999 9
Q ss_pred cCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 423 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|+|.++||+++|++|+ ...|.| .++.+.|.+||++.
T Consensus 84 ~~~v~~~Pt~~~~~~g~--~~~~~G-~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 84 KLGFDEEGSLYVLKGDR--TIEFDG-EFAADVLVEFLLDL 120 (350)
T ss_dssp HHTCCSTTEEEEEETTE--EEEECS-CCCHHHHHHHHHTT
T ss_pred hcCCCccceEEEEECCc--EEEecC-CCCHHHHHHHHHHh
Confidence 99999999999999988 678988 69999999999864
No 80
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.69 E-value=4.9e-17 Score=137.51 Aligned_cols=101 Identities=8% Similarity=0.243 Sum_probs=83.3
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc-----HHHHHHcCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ-----KEYAKQKLQ 425 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~-----~~l~~~~~~ 425 (463)
..+..++.++|++.+. .+++++|+|||+||++|+.+.|.|+++++++.. .+.+ +|++... .+++ ++|+
T Consensus 12 ~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~-~v~~--~~~~~~~~~~~~~~~~-~~~~ 84 (118)
T 1zma_A 12 KDLEVTTVVRAQEALD---KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA-HIYF--INSEEPSQLNDLQAFR-SRYG 84 (118)
T ss_dssp TTSEECCHHHHHHHHH---TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC-CCEE--EETTCGGGHHHHHHHH-HHHT
T ss_pred hhhhcCCHHHHHHHHh---CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC-eEEE--EECCCcCcHHHHHHHH-HHcC
Confidence 4678889999999886 688999999999999999999999999998864 4444 5554321 5788 8999
Q ss_pred CCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHH
Q 012452 426 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 460 (463)
Q Consensus 426 I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~ 460 (463)
|.++||+++|++|+. ...+.| ..+.++|.+||+
T Consensus 85 i~~~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~ 117 (118)
T 1zma_A 85 IPTVPGFVHITDGQI-NVRCDS-SMSAQEIKDFAG 117 (118)
T ss_dssp CCSSCEEEEEETTEE-EEECCT-TCCHHHHHHHHT
T ss_pred CCCCCeEEEEECCEE-EEEecC-CCCHHHHHHHhh
Confidence 999999999998874 345555 789999999986
No 81
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.68 E-value=7e-17 Score=138.03 Aligned_cols=106 Identities=12% Similarity=0.227 Sum_probs=85.5
Q ss_pred CeeecChhhHH--HHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEE--cCCCcHHHHHHcCCCC
Q 012452 352 NLVTLNRTGME--NLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR--ADGDQKEYAKQKLQLG 427 (463)
Q Consensus 352 ~V~~lt~~~f~--~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD--~d~~~~~l~~~~~~I~ 427 (463)
.+..++.++|+ +.+.....++++||+||++||++|+.+.|.|+++++.+++ ++.|+.|| ++.+ .+++ ++|+|.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~-~~~~-~~~~v~ 81 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKN-IDLA-YKYDAN 81 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHH-HHHH-HHTTCC
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCch-HHHH-HHcCCc
Confidence 34445555554 0011234789999999999999999999999999999975 79999999 8888 8999 999999
Q ss_pred CCCEEEEEe-CCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~-~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++||+++|+ +|+. ...+.| ..+.++|.++|+++
T Consensus 82 ~~Pt~~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 82 IVPTTVFLDKEGNK-FYVHQG-LMRKNNIETILNSL 115 (126)
T ss_dssp SSSEEEEECTTCCE-EEEEES-CCCHHHHHHHHHHH
T ss_pred ceeEEEEECCCCCE-EEEecC-CCCHHHHHHHHHHH
Confidence 999999999 6653 445556 78999999999875
No 82
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.68 E-value=1.2e-16 Score=133.27 Aligned_cols=105 Identities=22% Similarity=0.300 Sum_probs=88.9
Q ss_pred CCeeec-ChhhHHHHHhhc-CCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~-~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
..+..+ +.++|++.+... ..+++++|+||++||++|+.+.|.|+++++.+++ +.|+.||++.+ ++++ ++|+|.+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--v~~~~v~~~~~-~~~~-~~~~v~~ 79 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPN--VTFLKVDVDEL-KAVA-EEWNVEA 79 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSS--EEEEEEETTTC-HHHH-HHHHCSS
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCC--cEEEEEEcccc-HHHH-HhCCCCc
Confidence 457777 678999988732 2488999999999999999999999999999874 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 80 ~Pt~~~~~~G~~-~~~~~g--~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 80 MPTFIFLKDGKL-VDKTVG--ADKDGLPTLVAKH 110 (113)
T ss_dssp TTEEEEEETTEE-EEEEEC--CCTTHHHHHHHHH
T ss_pred ccEEEEEeCCEE-EEEEec--CCHHHHHHHHHHh
Confidence 999999988873 233444 5788999999875
No 83
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.68 E-value=2.5e-16 Score=132.29 Aligned_cols=105 Identities=18% Similarity=0.300 Sum_probs=89.0
Q ss_pred CCeeec-ChhhHHHHHhhc-CCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~-~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
..+..+ +.++|++.+... ..+++++|+||++||++|+.+.|.|+++++.+++ +.|+.||++.+ ++++ ++|+|.+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~v~~~~~-~~~~-~~~~v~~ 81 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPG--AIFLKVDVDEL-KDVA-EAYNVEA 81 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTS-HHHH-HHTTCCS
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCC--cEEEEEEcccC-HHHH-HHcCCCc
Confidence 467777 578999988631 1378999999999999999999999999999874 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 82 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 82 MPTFLFIKDGEK-VDSVVG--GRKDDIHTKIVAL 112 (118)
T ss_dssp BSEEEEEETTEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CcEEEEEeCCeE-EEEecC--CCHHHHHHHHHHH
Confidence 999999988873 334444 5889999999864
No 84
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.68 E-value=5.9e-17 Score=140.64 Aligned_cols=107 Identities=9% Similarity=0.200 Sum_probs=88.8
Q ss_pred cCCCCeeecCh-hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCC
Q 012452 348 FNSQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL 426 (463)
Q Consensus 348 ~~~~~V~~lt~-~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I 426 (463)
.....+.+++. ++|++++. ...++++||+|||+||++|+.+.|.|+++++.+ ++.|+.||++.+ .+++ ++|+|
T Consensus 17 ~~~~~v~~l~~~~~~~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~-~~l~-~~~~v 90 (133)
T 3cxg_A 17 QGQSIYIELKNTGSLNQVFS-STQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIH-PKLN-DQHNI 90 (133)
T ss_dssp ETTEEEEECCCTTHHHHHHT-C-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTC-HHHH-HHTTC
T ss_pred cCCccEEEecChhHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccch-HHHH-HhcCC
Confidence 34457888875 88988876 334689999999999999999999999998877 489999999999 9999 89999
Q ss_pred CCCCEEEEEe--CCCcC-eeecCCCCCCHHHHHHHHHHh
Q 012452 427 GSFPTILFFP--KHSSK-PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~~PTi~~f~--~g~~~-~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++||+++|+ +|+.. ...+.| . +.++|.++|+++
T Consensus 91 ~~~Pt~~~~~~~~g~g~~~~~~~G-~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 91 KALPTFEFYFNLNNEWVLVHTVEG-A-NQNDIEKAFQKY 127 (133)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEES-C-CHHHHHHHHHHH
T ss_pred CCCCEEEEEEecCCCeEEEEEEcC-C-CHHHHHHHHHHH
Confidence 9999999996 77622 345555 4 899999999875
No 85
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.68 E-value=5.6e-17 Score=140.98 Aligned_cols=101 Identities=12% Similarity=0.185 Sum_probs=88.8
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc---------CCCcHHHH
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA---------DGDQKEYA 420 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~---------d~~~~~l~ 420 (463)
+..+..++.++|++.+. . +++|+|||+||++|+.+.|.|++++++++ +.|+.||+ +.+ ++++
T Consensus 15 ~~~v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~-~~l~ 85 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAA-RLEM 85 (135)
T ss_dssp TTEEEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHH-HHHH
T ss_pred cCceeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhh-HHHH
Confidence 35789999999999885 3 99999999999999999999999998884 89999999 666 8999
Q ss_pred HHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 421 KQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 421 ~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|+|.++||+++|++|+. ...+.| ..+.+.+.++|+++
T Consensus 86 -~~~~v~~~Pt~~~~~~G~~-v~~~~G-~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 86 -NKAGVEGTPTLVFYKEGRI-VDKLVG-ATPWSLKVEKAREI 124 (135)
T ss_dssp -HHHTCCSSSEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred -HHcCCceeCeEEEEcCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 8999999999999998873 345555 79999999999876
No 86
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.68 E-value=2.2e-16 Score=137.24 Aligned_cols=105 Identities=14% Similarity=0.240 Sum_probs=88.7
Q ss_pred CCeeec-ChhhHHHHHhhc-CCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~-~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
..+..+ +.++|++.+... ..++++||+||++||++|+.+.|.|+++++++++ +.|+.||++.+ .+++ ++|+|.+
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~--v~~~~v~~~~~-~~~~-~~~~v~~ 99 (139)
T 3d22_A 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPS--LMFLVIDVDEL-SDFS-ASWEIKA 99 (139)
T ss_dssp TTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTS-HHHH-HHTTCCE
T ss_pred CcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEeCccc-HHHH-HHcCCCc
Confidence 356666 478999887532 2588999999999999999999999999999854 99999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. ...+.| . +.++|.++|+++
T Consensus 100 ~Pt~~~~~~G~~-~~~~~G-~-~~~~l~~~l~~~ 130 (139)
T 3d22_A 100 TPTFFFLRDGQQ-VDKLVG-A-NKPELHKKITAI 130 (139)
T ss_dssp ESEEEEEETTEE-EEEEES-C-CHHHHHHHHHHH
T ss_pred ccEEEEEcCCeE-EEEEeC-C-CHHHHHHHHHHH
Confidence 999999988873 344555 4 889999999865
No 87
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.67 E-value=5.2e-16 Score=148.39 Aligned_cols=106 Identities=18% Similarity=0.427 Sum_probs=91.1
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC--CCeEEEEEEc--CCCcHHHHHHcCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRA--DGDQKEYAKQKLQL 426 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~--~~v~f~~VD~--d~~~~~l~~~~~~I 426 (463)
..|.+|+.++|++.+. +.+++++|+|||+||++|+.+.|.|+++++++++ .++.|+.||| +.+ .++| ++|+|
T Consensus 12 ~~v~~l~~~~f~~~i~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~-~~l~-~~~~v 87 (244)
T 3q6o_A 12 DPLTLLQADTVRGAVL--GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETN-SAVC-RDFNI 87 (244)
T ss_dssp SSSEEECTTTHHHHHS--SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTT-HHHH-HHTTC
T ss_pred CCceeCChhhHHHHHh--hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhh-HHHH-HHcCC
Confidence 5799999999999774 4679999999999999999999999999999985 4799999999 556 9999 99999
Q ss_pred CCCCEEEEEeCCCcC----eeecCCCCCCHHHHHHHHHHh
Q 012452 427 GSFPTILFFPKHSSK----PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~~PTi~~f~~g~~~----~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++||+++|++|+.. .+.+ +| .+.+.|.++|.++
T Consensus 88 ~~~Pt~~~~~~g~~~~~g~~~~~-~g-~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 88 PGFPTVRFFXAFTXNGSGAVFPV-AG-ADVQTLRERLIDA 125 (244)
T ss_dssp CSSSEEEEECTTCCSSSCEECCC-TT-CCHHHHHHHHHHH
T ss_pred CccCEEEEEeCCCcCCCCeeEec-CC-CCHHHHHHHHHHH
Confidence 999999999986542 2334 33 6999999998764
No 88
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=2.3e-16 Score=137.33 Aligned_cols=104 Identities=14% Similarity=0.137 Sum_probs=86.0
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
..|.+++.++|.+.+.....++++||+|||+||++|+.+.|.|+++++++.+ +.|+.||++.+ . ++|+|.++|
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~--v~~~~vd~~~~-~----~~~~i~~~P 82 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE--TKFVKAIVNSC-I----EHYHDNCLP 82 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS--EEEEEECCSSS-C----SSCCSSCCS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--cEEEEEEhhcC-c----ccCCCCCCC
Confidence 4688899999999876333457999999999999999999999999999865 99999999987 3 689999999
Q ss_pred EEEEEeCCCcCeeecCCC------CCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSE------RRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg------~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...+.|. ..+.++|.++|+++
T Consensus 83 t~~~~~~G~~-v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 83 TIFVYKNGQI-EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEEESSSSC-SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEECCEE-EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9999998875 3333331 13789999999864
No 89
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.67 E-value=4.1e-16 Score=132.27 Aligned_cols=103 Identities=20% Similarity=0.341 Sum_probs=85.8
Q ss_pred CCeeec--ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTL--NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~l--t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
+.|..+ +.++|++.+. +.++++||+||++||++|+.+.|.|+++++++ + ++.|+.||++.+ ++++ ++|+|.+
T Consensus 3 ~~v~~~~g~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~-~~~~-~~~~i~~ 76 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIK--EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKN-GNAA-DAYGVSS 76 (118)
T ss_dssp CCSEEECSCHHHHHHHHH--HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTC-HHHH-HHTTCCS
T ss_pred CcceEecCCHHHHHHHHH--hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCC-HHHH-HhcCCCC
Confidence 356777 5788885443 26899999999999999999999999999999 3 699999999999 9999 9999999
Q ss_pred CCEEEEEeC----CCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPK----HSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~----g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++ |+. ...+.| ...++|.+.|+++
T Consensus 77 ~Pt~~~~~~~~~~G~~-~~~~~G--~~~~~l~~~~~~~ 111 (118)
T 2f51_A 77 IPALFFVKKEGNEIKT-LDQFVG--ADVSRIKADIEKF 111 (118)
T ss_dssp SSEEEEEEEETTEEEE-EEEEES--CCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcceE-EEeecC--CCHHHHHHHHHHh
Confidence 999999987 552 344555 4567799998875
No 90
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.66 E-value=3.5e-16 Score=148.24 Aligned_cols=103 Identities=21% Similarity=0.524 Sum_probs=94.0
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~--~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
.+..++.++|++++. .+++++|+|||+||++|+.+.|.|+++++.+.+ .++.|+.||++.+ ++++ ++|+|.++
T Consensus 131 ~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~ 205 (241)
T 3idv_A 131 VTLVLTKENFDEVVN---DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAE-TDLA-KRFDVSGY 205 (241)
T ss_dssp SSEECCTTTHHHHHH---HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTC-HHHH-HHTTCCSS
T ss_pred cceeccHHHHHHhhc---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCC-HHHH-HHcCCccc
Confidence 578889999999887 678999999999999999999999999999976 2499999999999 9999 99999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
||+++|++|+ .+.|.| .++.++|.+||++.
T Consensus 206 Pt~~~~~~g~--~~~~~g-~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 206 PTLKIFRKGR--PYDYNG-PREKYGIVDYMIEQ 235 (241)
T ss_dssp SEEEEEETTE--EEECCS-CCSHHHHHHHHHHH
T ss_pred CEEEEEECCe--EEEecC-CCCHHHHHHHHHhh
Confidence 9999999987 677887 79999999999864
No 91
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.66 E-value=2.9e-16 Score=164.70 Aligned_cols=106 Identities=20% Similarity=0.395 Sum_probs=95.5
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
.|..|+.++|++.+...+.++++||+|||+||++|+.+.|.|+++++.+++ .+.|++|||+.+ +++| ++|+|.++||
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 78 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG-IVPLAKVDCTAN-TNTC-NKYGVSGYPT 78 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCCEEEEETTTC-HHHH-HHTTCCEESE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC-ceEEEEEECCCC-HHHH-HhcCCCCCCE
Confidence 688999999999986222349999999999999999999999999999988 599999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...|.| .++.+.|.+||++.
T Consensus 79 l~~~~~g~~-~~~~~G-~~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 79 LKIFRDGEE-AGAYDG-PRTADGIVSHLKKQ 107 (481)
T ss_dssp EEEEETTEE-EEECCS-CSSHHHHHHHHHHH
T ss_pred EEEEeCCce-eeeecC-ccCHHHHHHHHHhh
Confidence 999999864 677887 79999999999864
No 92
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.65 E-value=8.6e-17 Score=141.65 Aligned_cols=102 Identities=10% Similarity=0.135 Sum_probs=77.2
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCC--ChhHHHhHHHHHHHHHHhcCCCeE--EEEEEcCCCcHHHHHHcCCCC
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKLAGNGVK--VGKFRADGDQKEYAKQKLQLG 427 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~w--C~~C~~~~p~l~~la~~~~~~~v~--f~~VD~d~~~~~l~~~~~~I~ 427 (463)
.+..++.++|++++. ..+.++|+||++| |++|+.+.|.|++++++| + ++. |++||+|++ ++++ ++|+|.
T Consensus 18 ~~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d~~-~~la-~~~~V~ 90 (142)
T 2es7_A 18 GWQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLEQS-EAIG-DRFNVR 90 (142)
T ss_dssp TCEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHHHH-HHHH-HTTTCC
T ss_pred cCcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECCCC-HHHH-HhcCCC
Confidence 688999999999886 5667899999987 999999999999999999 5 688 999999998 9999 999999
Q ss_pred CCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++||+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 91 ~iPT~~~fk~G~~-v~~~~G-~~~~~~l~~~i~~~ 123 (142)
T 2es7_A 91 RFPATLVFTDGKL-RGALSG-IHPWAELLTLMRSI 123 (142)
T ss_dssp SSSEEEEESCC-----CEES-CCCHHHHHHHHHHH
T ss_pred cCCeEEEEeCCEE-EEEEeC-CCCHHHHHHHHHHH
Confidence 9999999988874 445555 68999999999864
No 93
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.65 E-value=8.4e-16 Score=155.15 Aligned_cols=107 Identities=23% Similarity=0.549 Sum_probs=94.1
Q ss_pred CCCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCC
Q 012452 349 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLG 427 (463)
Q Consensus 349 ~~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~~~~l~~~~~~I~ 427 (463)
....|..|+.++|++++. +.+++++|+||||||++|+.+.|.|+++++.+++ .++.|+.||++.+ . + ++|+|.
T Consensus 247 ~~~~v~~l~~~~f~~~~~--~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~-~--~-~~~~v~ 320 (361)
T 3uem_A 247 DKQPVKVLVGKNFEDVAF--DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN-E--V-EAVKVH 320 (361)
T ss_dssp TTSSSEEECTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC-B--C-SSCCCC
T ss_pred ccCCcEEeecCchhhhcc--cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc-c--h-hhcCCc
Confidence 445799999999999873 4689999999999999999999999999999987 3699999999998 4 6 799999
Q ss_pred CCCEEEEEeCC-CcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKH-SSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g-~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++||+++|++| +..+..|.| .++.++|.+||++.
T Consensus 321 ~~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 321 SFPTLKFFPASADRTVIDYNG-ERTLDGFKKFLESG 355 (361)
T ss_dssp SSSEEEEECSSSSCCCEECCS-CSSHHHHHHHHTTT
T ss_pred ccCeEEEEECCCCcceeEecC-CCCHHHHHHHHHhc
Confidence 99999999776 334788888 69999999999863
No 94
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.63 E-value=1.8e-15 Score=145.28 Aligned_cols=101 Identities=17% Similarity=0.325 Sum_probs=90.0
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEe--cCCChhHHHhHHHHHHHHHHhcC--CCeEEEEEEcCC-----CcHHHHH
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLY--APWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADG-----DQKEYAK 421 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~Fy--A~wC~~C~~~~p~l~~la~~~~~--~~v~f~~VD~d~-----~~~~l~~ 421 (463)
..|+.|++++|++++. .+++|||.|| ||||+ +.|.|+++++.+.+ .++.|++|||+. + +++|
T Consensus 16 ~~v~~Lt~~nF~~vi~---~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n-~~la- 86 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVE---RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELEN-KALG- 86 (248)
T ss_dssp TTCEECCTTTHHHHHT---TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTT-HHHH-
T ss_pred CCcEECCHHHHHHHHh---cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCccccccc-HHHH-
Confidence 4689999999999775 7889999999 99998 99999999999953 379999999998 7 9999
Q ss_pred HcCCCC--CCCEEEEEeCCC-cCeeec--CCCCCCHHHHHHHHHHh
Q 012452 422 QKLQLG--SFPTILFFPKHS-SKPIKY--PSERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~--~~PTi~~f~~g~-~~~~~y--~gg~~~~~~L~~fI~~l 462 (463)
++|+|. ++||+++|+ |+ ..+..| .| .++.++|.+||++.
T Consensus 87 ~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G-~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 87 DRYKVDDKNFPSIFLFK-GNADEYVQLPSHV-DVTLDNLKAFVSAN 130 (248)
T ss_dssp HHTTCCTTSCCEEEEES-SSSSSEEECCTTS-CCCHHHHHHHHHHH
T ss_pred HHhCCCcCCCCeEEEEe-CCcCcceeecccC-CCCHHHHHHHHHHh
Confidence 999999 999999999 87 346778 77 69999999999864
No 95
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.62 E-value=1.4e-15 Score=131.11 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=81.3
Q ss_pred hhHHHHHhh-cCCCCcEEEEEecCCChhHHHhHHHHH--HHHHHhcCCCeEEEEEEc---CCCcHHHHHHcCCC---CCC
Q 012452 359 TGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSYV--ELADKLAGNGVKVGKFRA---DGDQKEYAKQKLQL---GSF 429 (463)
Q Consensus 359 ~~f~~~i~~-~~~~k~vlV~FyA~wC~~C~~~~p~l~--~la~~~~~~~v~f~~VD~---d~~~~~l~~~~~~I---~~~ 429 (463)
+++++.+.. ...++++||+||++||++|+.+.|.|+ ++++.+++ ++.|+.||+ +.+ .+++ ++|+| .++
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~~~~~-~~l~-~~~~v~~~~~~ 92 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGNFDRN-LELS-QAYGDPIQDGI 92 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTTTTSS-HHHH-HHTTCGGGGCS
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCcccch-HHHH-HHhCCccCCcc
Confidence 344444432 136899999999999999999999999 99999976 699999999 888 9999 99999 999
Q ss_pred CEEEEE-eCCCcCeeecCCC------CCCHHHHHHHHHHh
Q 012452 430 PTILFF-PKHSSKPIKYPSE------RRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f-~~g~~~~~~y~gg------~~~~~~L~~fI~~l 462 (463)
||+++| ++|+. ...+.|+ ..+.++|.+||+++
T Consensus 93 Pt~~~~d~~G~~-~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 93 PAVVVVNSDGKV-RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp SEEEEECTTSCE-EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred ceEEEECCCCCE-EEEecCCcccccccCCHHHHHHHHHHh
Confidence 999999 56652 3344332 47899999999886
No 96
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.62 E-value=2.3e-15 Score=141.57 Aligned_cols=103 Identities=11% Similarity=0.141 Sum_probs=88.2
Q ss_pred eeecChhhHHHHHhhcCCCCcE-EEEEecCCChhHHHhHHHHHHHHHHhcC---CCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 353 LVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQAMEGSYVELADKLAG---NGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 353 V~~lt~~~f~~~i~~~~~~k~v-lV~FyA~wC~~C~~~~p~l~~la~~~~~---~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
+..+++++++.+.. .++++ +|+|||+||++|+.+.|.|+++++.+.+ .++.|+.||++.+ ++++ ++|+|.+
T Consensus 118 ~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~ 192 (226)
T 1a8l_A 118 ETNLMDETKQAIRN---IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY-PEWA-DQYNVMA 192 (226)
T ss_dssp CCCCCHHHHHHHTT---CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC-HHHH-HHTTCCS
T ss_pred CCCCCHHHHHHHHh---cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccC-HHHH-HhCCCcc
Confidence 34577888888754 55666 9999999999999999999999999971 2699999999999 9999 9999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. ...+.| ..+.++|.+||+++
T Consensus 193 ~Pt~~~~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 193 VPKIVIQVNGED-RVEFEG-AYPEKMFLEKLLSA 224 (226)
T ss_dssp SCEEEEEETTEE-EEEEES-CCCHHHHHHHHHHH
T ss_pred cCeEEEEeCCce-eEEEcC-CCCHHHHHHHHHHh
Confidence 999999998874 456666 78999999999875
No 97
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.41 E-value=3.9e-17 Score=133.93 Aligned_cols=104 Identities=25% Similarity=0.429 Sum_probs=89.9
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
.|.+++.++|++.+. +.+++++|+||++||++|+.+.|.++++++.+++ ++.|+.+|++.+ .+++ ++|+|.++||
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~-~~~~v~~~Pt 76 (106)
T 2yj7_A 2 SVIEVTDENFEQEVL--KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDEN-PNTA-AQYGIRSIPT 76 (106)
Confidence 367888999987653 4688999999999999999999999999999986 699999999998 8999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|++|+. ...+.| ..+.++|.++|+++
T Consensus 77 ~~~~~~g~~-~~~~~g-~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 77 LLLFKNGQV-VDRLVG-AQPKEALKERIDKH 105 (106)
Confidence 999977763 345555 68889999999864
No 98
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.61 E-value=5.7e-15 Score=141.13 Aligned_cols=102 Identities=17% Similarity=0.362 Sum_probs=90.8
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEec--CCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCC-----CcHHHHHH
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYA--PWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADG-----DQKEYAKQ 422 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA--~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~-----~~~~l~~~ 422 (463)
+.|+.|++++|++++. .+++|||.||| |||+ +.|.|+++++.+.+ .++.|++||+++ + +++| +
T Consensus 5 ~~v~~Lt~~nF~~~i~---~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~-~~l~-~ 75 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIP---KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLN-MELS-E 75 (240)
T ss_dssp TTCEECCTTHHHHHGG---GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCS-HHHH-H
T ss_pred CCceECCHHHHHHHHc---CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhh-HHHH-H
Confidence 5789999999999875 67899999999 9999 99999999999974 479999999554 6 9999 9
Q ss_pred cCCCC--CCCEEEEEeCCC-cCeeecCCCCCCHHHHHHHHHHh
Q 012452 423 KLQLG--SFPTILFFPKHS-SKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~--~~PTi~~f~~g~-~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|+|. ++||+++|++|+ ..+..|.| .++.+.|.+||++.
T Consensus 76 ~~~V~~~~~PTl~~f~~G~~~~~~~y~G-~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 76 KYKLDKESYPVFYLFRDGDFENPVPYTG-AVKVGAIQRWLKGQ 117 (240)
T ss_dssp HTTCCGGGCSEEEEEETTCSSCCEECCS-CSCHHHHHHHHHHT
T ss_pred HcCCCCCCCCEEEEEeCCCcCcceeecC-CCCHHHHHHHHHHh
Confidence 99999 999999999998 45778887 79999999999864
No 99
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=1.4e-15 Score=130.27 Aligned_cols=107 Identities=15% Similarity=0.249 Sum_probs=85.7
Q ss_pred CeeecChhhHHHHHhhc-CCCCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcCC-CcHHHHHHcCCC
Q 012452 352 NLVTLNRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADG-DQKEYAKQKLQL 426 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~-~~~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d~-~~~~l~~~~~~I 426 (463)
..+.++..+|++.+... ..++++||+||++||++|+.+.|.+ +.+++.+.. ++.++.||++. .+.+++ ++|+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~-~~~~v 84 (130)
T 2kuc_A 7 DGIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEKGEGVELR-KKYGV 84 (130)
T ss_dssp CCCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSSTTHHHHH-HHTTC
T ss_pred CCCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCCcchHHHH-HHcCC
Confidence 34556777888776432 2578999999999999999999999 778777765 68999999984 227899 99999
Q ss_pred CCCCEEEEEe-CCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 427 GSFPTILFFP-KHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~~PTi~~f~-~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++||+++|+ +|+. ...+.| ..+.++|.++|+++
T Consensus 85 ~~~Pt~~~~d~~G~~-~~~~~G-~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 85 HAYPTLLFINSSGEV-VYRLVG-AEDAPELLKKVKLG 119 (130)
T ss_dssp CSSCEEEEECTTSCE-EEEEES-CCCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcE-EEEecC-CCCHHHHHHHHHHH
Confidence 9999999995 5652 445666 68999999999875
No 100
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.60 E-value=2e-15 Score=128.89 Aligned_cols=103 Identities=12% Similarity=0.242 Sum_probs=86.9
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecC-------CChhHHHhHHHHHHHHHHhcCCCeEEEEEEc-------CCCcH
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAP-------WCQFCQAMEGSYVELADKLAGNGVKVGKFRA-------DGDQK 417 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~-------wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~-------d~~~~ 417 (463)
.+...+.++|++.+. ...+++++|+|||+ ||++|+.+.|.|+++++++++ ++.|+.||+ +.+ .
T Consensus 6 ~v~~~~~~~~~~~~~-~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~~~~~~~d~~-~ 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVE-QHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVGEKPYWKDPN-N 82 (123)
T ss_dssp EEEEESHHHHHHHHH-TTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECCCHHHHHCTT-C
T ss_pred eEEeccHHHHHHHHH-HhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECCCchhhhchh-H
Confidence 356678899999886 22489999999999 999999999999999999976 799999999 677 8
Q ss_pred HHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHH
Q 012452 418 EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 418 ~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~ 461 (463)
+++ ++|+|.++||+++|+++.. ...+.+ .+.+.|.+||++
T Consensus 83 ~~~-~~~~i~~~Pt~~~~~~~~~-~~g~~~--~~~~~l~~~i~~ 122 (123)
T 1wou_A 83 DFR-KNLKVTAVPTLLKYGTPQK-LVESEC--LQANLVEMLFSE 122 (123)
T ss_dssp HHH-HHHCCCSSSEEEETTSSCE-EEGGGG--GCHHHHHHHHHC
T ss_pred HHH-HHCCCCeeCEEEEEcCCce-Eecccc--CCHHHHHHHHhc
Confidence 999 8999999999999988653 344443 678899999874
No 101
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.60 E-value=2.6e-15 Score=130.08 Aligned_cols=101 Identities=20% Similarity=0.363 Sum_probs=82.9
Q ss_pred ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcCCC---cHHHHHHcCCCCCCC
Q 012452 357 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGD---QKEYAKQKLQLGSFP 430 (463)
Q Consensus 357 t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d~~---~~~l~~~~~~I~~~P 430 (463)
+.++++..+.. ..++++||+|||+||++|+.+.|.+ .++++.+++ +.|+.||++.+ +.+++ ++|+|.++|
T Consensus 18 ~~~~~~~~l~~-~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~~~l~-~~~~v~~~P 93 (134)
T 2fwh_A 18 TVDELNQALVE-AKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALL-KHLNVLGLP 93 (134)
T ss_dssp SHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHH-HHTTCCSSS
T ss_pred CHHHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchHHHHH-HHcCCCCCC
Confidence 55777777652 2489999999999999999999999 999999875 99999999542 17899 899999999
Q ss_pred EEEEE-eCCCcCe-eecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFF-PKHSSKP-IKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f-~~g~~~~-~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++| ++|+... ..+.| ..+.++|.++|+++
T Consensus 94 t~~~~d~~G~~v~~~~~~G-~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTG-FMDAETFSAHLRDR 126 (134)
T ss_dssp EEEEECTTSCBCGGGCBCS-CCCHHHHHHHHHHC
T ss_pred EEEEECCCCCEeeeeeeee-ccCHHHHHHHHHhc
Confidence 99999 5666311 35666 78999999999875
No 102
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.59 E-value=1.1e-15 Score=144.20 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=88.7
Q ss_pred CCeeec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 351 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
..|.++ +.++|.+.+.....+++|||+|||+||++|+.+.|.|.+++++|.+ +.|++||++ + ++++ .+|+|.++
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~--v~f~~vd~~-~-~~l~-~~~~i~~~ 173 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPM--VKFCKIRAS-N-TGAG-DRFSSDVL 173 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTT--SEEEEEEHH-H-HTCS-TTSCGGGC
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCC--eEEEEEECC-c-HHHH-HHCCCCCC
Confidence 368888 8899999886444468999999999999999999999999999964 999999999 6 8899 89999999
Q ss_pred CEEEEEeCCCcCeeecCCCCCC-------HHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPSERRD-------VDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~gg~~~-------~~~L~~fI~~l 462 (463)
||+++|++|+. ...+.| ..+ .++|.+||.++
T Consensus 174 PTl~~~~~G~~-v~~~~G-~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 174 PTLLVYKGGEL-ISNFIS-VAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SEEEEEETTEE-EEEETT-GGGGSCSSCCHHHHHHHHHTT
T ss_pred CEEEEEECCEE-EEEEeC-CcccCcccCCHHHHHHHHHHc
Confidence 99999998874 334444 333 58999999864
No 103
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.58 E-value=9.4e-15 Score=154.65 Aligned_cols=111 Identities=17% Similarity=0.381 Sum_probs=93.6
Q ss_pred ccCC-CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC--CCeEEEEEEcCC--CcHHHHH
Q 012452 347 IFNS-QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADG--DQKEYAK 421 (463)
Q Consensus 347 ~~~~-~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~--~~v~f~~VD~d~--~~~~l~~ 421 (463)
++.. ..|.+++.++|+..+. +.++++||+|||+||++|+.+.|.|+++++++++ .++.|+.|||+. + .+++
T Consensus 7 Ly~~~~~V~~Lt~~~f~~~v~--~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~-~~l~- 82 (519)
T 3t58_A 7 LYSSSDPLTLLDADSVRPTVL--GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETN-SAVC- 82 (519)
T ss_dssp SCCTTSSSEEECTTTHHHHHS--SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGG-HHHH-
T ss_pred cCCCCCCcEECChHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcccc-HHHH-
Confidence 4433 5799999999999774 4679999999999999999999999999999976 369999999964 5 8999
Q ss_pred HcCCCCCCCEEEEEeCCCc---CeeecCCCCCCHHHHHHHHHHh
Q 012452 422 QKLQLGSFPTILFFPKHSS---KPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~~~PTi~~f~~g~~---~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|+|.++||+++|++|+. ....+.| .++.+.|.++|+++
T Consensus 83 ~~~~V~~~PTl~~f~~g~~~G~~~~~~~g-~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 83 REFNIAGFPTVRFFQAFTKNGSGATLPGA-GANVQTLRMRLIDA 125 (519)
T ss_dssp HHTTCCSBSEEEEECTTCCSCCCEEECCS-SCCHHHHHHHHHHH
T ss_pred HHcCCcccCEEEEEcCcccCCCceeEecC-CCCHHHHHHHHHHH
Confidence 9999999999999996543 2345555 58999999999764
No 104
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.58 E-value=6.7e-15 Score=127.64 Aligned_cols=103 Identities=14% Similarity=0.222 Sum_probs=90.0
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC--
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS-- 428 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~-- 428 (463)
+.|.++|.++|++++. .+.+++|+|||+ |++|+.+.|.|+++|++|++ ++.|+++|+|++ ++++ ++|+|.+
T Consensus 6 plv~~~t~~~f~~~~~---~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g-k~~f~~vd~d~~-~~~a-~~~gi~~~~ 78 (133)
T 2djk_A 6 PLIGEIGPETYSDYMS---AGIPLAYIFAET-AEERKELSDKLKPIAEAQRG-VINFGTIDAKAF-GAHA-GNLNLKTDK 78 (133)
T ss_dssp CCSEECCHHHHHHHHH---TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT-TSEEEEECTTTT-GGGT-TTTTCCSSS
T ss_pred CceeccChHHHHHHhc---CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC-eEEEEEEchHHh-HHHH-HHcCCCccc
Confidence 3488999999998875 778999999999 89999999999999999988 799999999999 8899 9999999
Q ss_pred CCEEEEEeC--CCcCeeecC-CCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPK--HSSKPIKYP-SERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~--g~~~~~~y~-gg~~~~~~L~~fI~~l 462 (463)
+||+++|++ |+ .+.+. .|..+.++|.+||+++
T Consensus 79 iPtl~i~~~~~g~--~~~~~~~g~~~~~~l~~fi~~~ 113 (133)
T 2djk_A 79 FPAFAIQEVAKNQ--KFPFDQEKEITFEAIKAFVDDF 113 (133)
T ss_dssp SSEEEEECTTTCC--BCCCCSSSCCCHHHHHHHHHHH
T ss_pred CCEEEEEecCcCc--ccCCCCccccCHHHHHHHHHHH
Confidence 999999987 54 33443 1378999999999865
No 105
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.58 E-value=9.4e-15 Score=153.18 Aligned_cols=107 Identities=23% Similarity=0.583 Sum_probs=95.9
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCC-CeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-GVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~-~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
...|..++.++|++++. +.++++||+|||+||++|+.+.|.|+++++.+++. ++.|++||++.+ +++ .+|+|.+
T Consensus 351 ~~~v~~~~~~~~~~~~~--~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~--~~~-~~~~v~~ 425 (481)
T 3f8u_A 351 DGPVKVVVAENFDEIVN--NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN--DVP-SPYEVRG 425 (481)
T ss_dssp CSSSEEECTTTHHHHHT--CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS--CCC-TTCCCCS
T ss_pred CCCeEEecccCHHHHhh--cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch--hhH-hhCCCcc
Confidence 35788999999999875 45899999999999999999999999999999873 799999999988 788 8999999
Q ss_pred CCEEEEEeCCCcC-eeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSK-PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~-~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+.. +..|.| .++.++|.+||++.
T Consensus 426 ~Pt~~~~~~~~~~~~~~~~G-~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 426 FPTIYFSPANKKLNPKKYEG-GRELSDFISYLQRE 459 (481)
T ss_dssp SSEEEEECTTCTTSCEECCS-CCSHHHHHHHHHHH
T ss_pred cCEEEEEeCCCeEeeeEeCC-CCCHHHHHHHHHHh
Confidence 9999999998864 688887 69999999999864
No 106
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.57 E-value=5.1e-15 Score=164.31 Aligned_cols=104 Identities=22% Similarity=0.485 Sum_probs=88.6
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|..|+.++|++.+. .++++||+|||+||++|+.+.|.|+++++.+.+ .+.|++|||+.+ +++| ++|+|.++|
T Consensus 116 ~~v~~l~~~~f~~~i~---~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 189 (780)
T 3apo_A 116 PEIITLERREFDAAVN---SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDG-LLRIGAVNCGDD-RMLC-RMKGVNSYP 189 (780)
T ss_dssp TTEEECCHHHHHHHHT---SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTC-SSCC---------C
T ss_pred cceeeechHhHHhhhc---CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcC-ceEEEEEeCCCc-HHHH-HHcCCceee
Confidence 5799999999999985 789999999999999999999999999999987 699999999999 9999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|++|+. ...|.| .++.+.|.+||.+.
T Consensus 190 t~~~~~~g~~-~~~~~G-~~~~~~l~~~l~~~ 219 (780)
T 3apo_A 190 SLFIFRSGMA-AVKYNG-DRSKESLVAFAMQH 219 (780)
T ss_dssp EEEEECTTSC-CEECCS-CSCHHHHHHHHHTT
T ss_pred eEEEEeCCcE-eeEecC-CCCHHHHHHHHHHh
Confidence 9999999885 577887 79999999999764
No 107
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.57 E-value=3.8e-15 Score=142.73 Aligned_cols=106 Identities=17% Similarity=0.230 Sum_probs=87.7
Q ss_pred CCeeec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 351 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
..|..+ +.++|.+.+.....+++|||+|||+||++|+.+.|.|.+|+++|.+ +.|++||++. .+++ .+|+|.++
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~--~~l~-~~~~I~~~ 186 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASN--TGAG-DRFSSDVL 186 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHH--HCCT-TSSCTTTC
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCc--HHHH-HHCCCCCC
Confidence 368888 7899999886333588999999999999999999999999999976 9999999986 4678 89999999
Q ss_pred CEEEEEeCCCcCeeecCC------CCCCHHHHHHHHHHh
Q 012452 430 PTILFFPKHSSKPIKYPS------ERRDVDSLMAFVDAL 462 (463)
Q Consensus 430 PTi~~f~~g~~~~~~y~g------g~~~~~~L~~fI~~l 462 (463)
||+++|++|+.. ..+.| ..++.+.|..||.+.
T Consensus 187 PTll~~~~G~~v-~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 187 PTLLVYKGGELL-SNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SEEEEEETTEEE-EEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CEEEEEECCEEE-EEEeCCcccccccccHHHHHHHHHHc
Confidence 999999988742 22222 235788999999764
No 108
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.57 E-value=5e-15 Score=123.93 Aligned_cols=100 Identities=11% Similarity=0.106 Sum_probs=83.1
Q ss_pred CCeeec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHcCC
Q 012452 351 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQ 425 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~----l~~~~~~ 425 (463)
.....+ +.++|+++++ .+++++|+|+|+||++|+.+.|.|+++++. . ++.|++||++++ ++ ++ .+|+
T Consensus 6 ~~~~~i~s~e~f~~ii~---~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdVde~-r~~Sn~IA-~~~~ 77 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIE---ENKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIVQQE-RDLSDYIA-KKTN 77 (112)
T ss_dssp GCEEECCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEGGGG-HHHHHHHH-HHHT
T ss_pred cceeecCCHHHHHHHHh---cCCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEeecC-chhhHHHH-HHhC
Confidence 456666 5688999887 589999999999999999999999999985 3 599999999998 76 78 9999
Q ss_pred CCC-CCEEEEEeCCCcCeeecCCCCCCHHHHHHHH
Q 012452 426 LGS-FPTILFFPKHSSKPIKYPSERRDVDSLMAFV 459 (463)
Q Consensus 426 I~~-~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI 459 (463)
|++ .||+++|++|+..--.-.+ ..+.+.|.+.+
T Consensus 78 V~h~sPq~il~k~G~~v~~~SH~-~I~~~~l~~~~ 111 (112)
T 3iv4_A 78 VKHESPQAFYFVNGEMVWNRDHG-DINVSSLAQAE 111 (112)
T ss_dssp CCCCSSEEEEEETTEEEEEEEGG-GCSHHHHHHHT
T ss_pred CccCCCeEEEEECCEEEEEeecc-ccCHHHHHHhh
Confidence 995 9999999999953222333 68888888765
No 109
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.56 E-value=4.3e-16 Score=133.26 Aligned_cols=105 Identities=21% Similarity=0.313 Sum_probs=88.1
Q ss_pred CCeeec-ChhhHHHHHhhc-CCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~-~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
..+..+ +.++|++.+... ..++++||+||++||++|+.+.|.|+++++.+++ +.|+.||++.+ .+++ ++|+|.+
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--v~~~~v~~~~~-~~~~-~~~~v~~ 89 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPG--AVFLKVDVDEL-KEVA-EKYNVEA 89 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTT--BCCEECCTTTS-GGGH-HHHTCCS
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC--CEEEEEeccch-HHHH-HHcCCCc
Confidence 467777 458899887632 2588999999999999999999999999999874 99999999999 9999 8999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++|++|+. ...+.| .+.++|.++|+++
T Consensus 90 ~Pt~~~~~~g~~-~~~~~g--~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 90 MPTFLFIKDGAE-ADKVVG--ARKDDLQNTIVKH 120 (130)
T ss_dssp SCCCCBCTTTTC-CBCCCT--TCTTTHHHHHHHH
T ss_pred cceEEEEeCCeE-EEEEeC--CCHHHHHHHHHHH
Confidence 999999988873 333444 4778899998865
No 110
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.55 E-value=5.9e-15 Score=116.52 Aligned_cols=82 Identities=16% Similarity=0.293 Sum_probs=73.6
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCC
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 451 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~ 451 (463)
.+++|+||++||++|+.+.|.++++++++++ ++.|+.+|++++ ++++ ++|+|.++||+++ +|+ . .+.| ..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVMEN-PQKA-MEYGIMAVPTIVI--NGD--V-EFIG-APT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSSS-CCTT-TSTTTCCSSEEEE--TTE--E-ECCS-SSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCCC-HHHH-HHCCCcccCEEEE--CCE--E-eeec-CCC
Confidence 4689999999999999999999999999986 799999999998 8999 8999999999998 665 3 6666 678
Q ss_pred HHHHHHHHHHh
Q 012452 452 VDSLMAFVDAL 462 (463)
Q Consensus 452 ~~~L~~fI~~l 462 (463)
.++|.++|+++
T Consensus 74 ~~~l~~~l~~~ 84 (85)
T 1fo5_A 74 KEALVEAIKKR 84 (85)
T ss_dssp SHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 111
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.55 E-value=2.5e-14 Score=150.90 Aligned_cols=106 Identities=25% Similarity=0.582 Sum_probs=91.7
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhc-C-CCeEEEEEEcCCCcHHHHHHcCCCC
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA-G-NGVKVGKFRADGDQKEYAKQKLQLG 427 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~-~-~~v~f~~VD~d~~~~~l~~~~~~I~ 427 (463)
...|..|++++|+.++. +.++++||+||||||++|+.+.|.|+++++.++ + .++.++++|++.+ +.. . |+|.
T Consensus 357 ~~~v~~l~~~~f~~~v~--~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~--~~~-~-~~v~ 430 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVN--DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEN--DVR-G-VVIE 430 (504)
T ss_dssp SCSEEEECTTTHHHHHH--CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGC--CCS-S-CCCS
T ss_pred cccceecccccHHHhhc--cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcc--ccc-c-CCce
Confidence 45799999999999874 468999999999999999999999999999987 2 3699999999987 344 4 9999
Q ss_pred CCCEEEEEeCCCc-CeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSS-KPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~-~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++||+++|++|+. ....|.| .++.++|.+||++.
T Consensus 431 ~~Pt~~~~~~G~~~~~~~~~G-~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 431 GYPTIVLYPGGKKSESVVYQG-SRSLDSLFDFIKEN 465 (504)
T ss_dssp SSSEEEEECCTTSCCCCBCCS-CCCHHHHHHHHHHH
T ss_pred ecCeEEEEeCCceecceEecC-CCCHHHHHHHHHhc
Confidence 9999999988864 2567877 69999999999864
No 112
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.54 E-value=1.4e-15 Score=157.78 Aligned_cols=95 Identities=17% Similarity=0.371 Sum_probs=81.2
Q ss_pred CCCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCC-------CeEEEEEEcCCCcHHHHHH
Q 012452 350 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-------GVKVGKFRADGDQKEYAKQ 422 (463)
Q Consensus 350 ~~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~-------~v~f~~VD~d~~~~~l~~~ 422 (463)
...|++|+.++|++++. .+.+++|||+|||+||++|+.+.|.|+++++.+.+. .+.|++||++.+ ++++ +
T Consensus 22 ~~~V~~Lt~~~F~~~l~-~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~-~~la-~ 98 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHR-VAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE-VDLC-R 98 (470)
T ss_dssp CTTEEECSCSCGGGTCT-TGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC-HHHH-H
T ss_pred CCCcEECCHHHHHHHHH-hCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC-HHHH-H
Confidence 46899999999998875 234589999999999999999999999999999741 499999999999 9999 9
Q ss_pred cCCCCCCCEEEEEeCCCc-CeeecCC
Q 012452 423 KLQLGSFPTILFFPKHSS-KPIKYPS 447 (463)
Q Consensus 423 ~~~I~~~PTi~~f~~g~~-~~~~y~g 447 (463)
+|+|.++||+++|++|+. ....|.|
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G 124 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECG 124 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCC
T ss_pred HcCCCccCeEEEEECCCceEEEEeeC
Confidence 999999999999976553 3455655
No 113
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.54 E-value=6.5e-15 Score=116.26 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=72.7
Q ss_pred cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCH
Q 012452 373 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 452 (463)
Q Consensus 373 ~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~ 452 (463)
..+|+||++||++|+.+.|.++++++++++ ++.|+.+|++++ ++++ ++|+|.++||+++ +|+ . .+.| ..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~-~~~~-~~~~v~~~Pt~~~--~G~--~-~~~G-~~~~ 73 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMVD-REKA-IEYGLMAVPAIAI--NGV--V-RFVG-APSR 73 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTTC-GGGG-GGTCSSCSSEEEE--TTT--E-EEEC-SSCC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCCC-HHHH-HhCCceeeCEEEE--CCE--E-EEcc-CCCH
Confidence 468999999999999999999999999986 799999999999 8999 8999999999998 676 3 5666 5788
Q ss_pred HHHHHHHHHh
Q 012452 453 DSLMAFVDAL 462 (463)
Q Consensus 453 ~~L~~fI~~l 462 (463)
++|.++|+++
T Consensus 74 ~~l~~~l~~~ 83 (85)
T 1nho_A 74 EELFEAINDE 83 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 114
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.54 E-value=9.8e-15 Score=131.66 Aligned_cols=106 Identities=11% Similarity=0.131 Sum_probs=80.0
Q ss_pred CeeecChhhHHHHHhh-cCCCCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcCCCcHHH--------
Q 012452 352 NLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQKEY-------- 419 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~-~~~~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d~~~~~l-------- 419 (463)
....++..+|++.+.. ..+++++||+|||+||++|+.|.+.+ .++.+.+++ ++.|+.||++.+ .++
T Consensus 27 ~~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~-~~~~~~~~~~~ 104 (172)
T 3f9u_A 27 NEVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNK-TPLTEPVKIME 104 (172)
T ss_dssp -CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCC-CEEEEEEEEEE
T ss_pred cccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcc-cccchhhhhhh
Confidence 3455566777776643 23689999999999999999986655 667766665 699999999877 433
Q ss_pred ------------------HHHcCCCCCCCEEEEEe-CCCcCeeecCCCCCC-HHHHHHHHHHh
Q 012452 420 ------------------AKQKLQLGSFPTILFFP-KHSSKPIKYPSERRD-VDSLMAFVDAL 462 (463)
Q Consensus 420 ------------------~~~~~~I~~~PTi~~f~-~g~~~~~~y~gg~~~-~~~L~~fI~~l 462 (463)
+ ++|+|.++||+++|+ +|+ ....+.| ..+ .++|.++|+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~Pt~~lid~~G~-~~~~~~G-~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 105 NGTERTLRTVGDKWSYLQR-VKFGANAQPFYVLIDNEGN-PLNKSYA-YDEDISKYINFLQTG 164 (172)
T ss_dssp TTEEEEEEEHHHHHHHHHH-HHHSCCCSSEEEEECTTSC-BSSCCBC-SCCCHHHHHHHHHHH
T ss_pred cchhhhhhhhhhhhhHHHH-HHcCCCCcceEEEECCCCC-EEeeccC-CCCCHHHHHHHHHHH
Confidence 6 789999999999995 555 3444455 566 99999998764
No 115
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.51 E-value=5.6e-14 Score=132.51 Aligned_cols=98 Identities=14% Similarity=0.258 Sum_probs=84.7
Q ss_pred eeecChhhHHHHHhhcCCCCcE-EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 353 LVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 353 V~~lt~~~f~~~i~~~~~~k~v-lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
+..+++++|+.++. .++++ ||+||++||++|+.+.|.|++++..+. ++.|+.||++.+ ++++ ++|+|.++||
T Consensus 120 ~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~~-~~l~-~~~~v~~~Pt 192 (229)
T 2ywm_A 120 KPQLSEKTLELLQV---VDIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASEN-QDLA-EQFQVVGVPK 192 (229)
T ss_dssp CCSCCHHHHHHHTT---CCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGGC-HHHH-HHTTCCSSSE
T ss_pred ccCCCHHHHHHHHh---cCCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCCC-HHHH-HHcCCcccCE
Confidence 56688899998764 45555 889999999999999999999999984 599999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++ +|+ ...+.| .++.++|.+||+++
T Consensus 193 ~~~--~G~--~~~~~G-~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 193 IVI--NKG--VAEFVG-AQPENAFLGYIMAV 218 (229)
T ss_dssp EEE--GGG--TEEEES-CCCHHHHHHHHHHH
T ss_pred EEE--CCE--EEEeeC-CCCHHHHHHHHHHH
Confidence 998 666 455777 79999999999764
No 116
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.48 E-value=1.3e-13 Score=122.50 Aligned_cols=88 Identities=13% Similarity=0.297 Sum_probs=73.0
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcCCCc----------HHHHHHcCCCCCCCEEEEE
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ----------KEYAKQKLQLGSFPTILFF 435 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d~~~----------~~l~~~~~~I~~~PTi~~f 435 (463)
.++++||+|| |+||++|+.+.|.+ .++.+.+.. ++.++.||++... .+++ ++|+|.++||+++|
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~-~~~~v~~~Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELK-AQYKVTGFPELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHH-HHTTCCSSSEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHH-HHcCCCCCCEEEEE
Confidence 5899999999 99999999999999 788776644 6999999998751 4888 89999999999999
Q ss_pred e-CCCcCeeecCCCCC--CHHHHHHHHHHh
Q 012452 436 P-KHSSKPIKYPSERR--DVDSLMAFVDAL 462 (463)
Q Consensus 436 ~-~g~~~~~~y~gg~~--~~~~L~~fI~~l 462 (463)
+ +|+ ....+ | .. +.++|.++|+++
T Consensus 124 d~~G~-~~~~~-G-~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 124 DAEGK-QLARM-G-FEPGGGAAYVSKVKSA 150 (154)
T ss_dssp CTTCC-EEEEE-C-CCTTCHHHHHHHHHHH
T ss_pred cCCCC-EEEEe-c-CCCCCHHHHHHHHHHH
Confidence 4 555 34444 5 56 899999999875
No 117
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.48 E-value=2.1e-13 Score=121.03 Aligned_cols=90 Identities=13% Similarity=0.269 Sum_probs=76.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcC-------------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKL------------------------- 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~------------------------- 424 (463)
.++++||+||++||++|+.+.|.+.++++++++.++.|+.|+++.+ .+.+ ++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ-LPNV-KNYMKTQGIIYPVMMATPELIRAFNGYI 110 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC-HHHH-HHHHHHHTCCSCEEECCHHHHHHHHTTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC-HHHH-HHHHHHcCCCCceEecCHHHHHHHhhhh
Confidence 5789999999999999999999999999999886799999999987 6665 555
Q ss_pred --CCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 --QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 --~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|.++|+++++++++.+...+.| ..+.++|.++|+++
T Consensus 111 ~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 111 DGGITGIPTSFVIDASGNVSGVIVG-PRSKADFDRIVKMA 149 (165)
T ss_dssp TTCSCSSSEEEEECTTSBEEEEECS-CCCHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 89999999999655543455666 68999999999875
No 118
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.20 E-value=3.9e-15 Score=127.63 Aligned_cols=89 Identities=16% Similarity=0.246 Sum_probs=74.2
Q ss_pred CCCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCCCCEEEEEe--CCCcC-
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILFFP--KHSSK- 441 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d--~~~~~l~~~~~~I~~~PTi~~f~--~g~~~- 441 (463)
.++++||+|||+||++|+.+.|.+ +++++.+++ ++.|+.||++ .+ .+++ ++|+|.++||+++|+ +|+..
T Consensus 18 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 18 HGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDTPEG-QELA-RRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 688999999999999999999999 899988876 7999999995 44 7899 899999999999994 45521
Q ss_pred eeecCCCCCCHHHHHHHHHHh
Q 012452 442 PIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 442 ~~~y~gg~~~~~~L~~fI~~l 462 (463)
...+.| ..+.++|.++|+++
T Consensus 95 ~~~~~G-~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 95 VGRLFG-SRPRAEFLKELRQV 114 (130)
Confidence 234555 68888999998765
No 119
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.47 E-value=2.7e-13 Score=119.14 Aligned_cols=91 Identities=14% Similarity=0.229 Sum_probs=77.2
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC-----------------------cHHHHHHcCC-
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD-----------------------QKEYAKQKLQ- 425 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~-----------------------~~~l~~~~~~- 425 (463)
+++++||+||++||++|+.+.|.|.++++++++.++.|+.|++|.. ..+++ +.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFM-KTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHH-HTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHH-HHhCC
Confidence 5799999999999999999999999999999766899999999732 14577 7899
Q ss_pred -CCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 426 -LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 -I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+.++|+++++++++.+...+.| ..+.++|.++|+++
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 138 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITG-EVNEKSLTDAVKLA 138 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCS-CCCHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 9999999999665544556666 68999999999876
No 120
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.47 E-value=4.2e-13 Score=116.44 Aligned_cols=102 Identities=16% Similarity=0.195 Sum_probs=81.9
Q ss_pred eecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC--------------------
Q 012452 354 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-------------------- 413 (463)
Q Consensus 354 ~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d-------------------- 413 (463)
..++++.+..... .++++||+||++||++|+.+.|.+.++++++.+ .+.|+.|+++
T Consensus 15 ~~~~g~~~~~~~~---~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 90 (148)
T 2b5x_A 15 AWLNGEVTREQLI---GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-QLNVVAVHMPRSEDDLDPGKIKETAAEHDI 90 (148)
T ss_dssp EEESCCCCHHHHT---TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEECCCSTTTSSHHHHHHHHHHTTC
T ss_pred ccccCcccchhhc---CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-CcEEEEEEcCCCccccCHHHHHHHHHHcCC
Confidence 4556666554433 679999999999999999999999999999988 4999999964
Q ss_pred -------CCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 414 -------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 414 -------~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+ .+++ +.|+|.++||+++++.++.....+.| ..+.++|.++|+++
T Consensus 91 ~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 91 TQPIFVDSD-HALT-DAFENEYVPAYYVFDKTGQLRHFQAG-GSGMKMLEKRVNRV 143 (148)
T ss_dssp CSCEEECSS-CHHH-HHTCCCCSSEEEEECTTCBEEEEEES-CSTTHHHHHHHHHH
T ss_pred CcceEECCc-hhHH-HHhCCCCCCEEEEECCCCcEEEEecC-CCCHHHHHHHHHHH
Confidence 34 6788 89999999999999544443445555 67889999999875
No 121
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.46 E-value=2.4e-13 Score=116.36 Aligned_cols=87 Identities=21% Similarity=0.366 Sum_probs=75.5
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC----------------------CcHHHHHHcCCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------DQKEYAKQKLQLG 427 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~----------------------~~~~l~~~~~~I~ 427 (463)
.+++++|+||++||++|+.+.|.+.+++++++ ++.|+.|+++. + .+++ +.|+|.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i~ 98 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDAD-GVIW-ARYNVP 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTT-SHHH-HHTTCC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCc-hhHH-HhcCCC
Confidence 57899999999999999999999999999997 59999999987 4 6788 899999
Q ss_pred CCCEEEEEeCCCcCeeecC---CCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYP---SERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~---gg~~~~~~L~~fI~~l 462 (463)
++|+++++++++... .+. | ..+.++|.++|+++
T Consensus 99 ~~P~~~lid~~G~i~-~~~~~~g-~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 99 WQPAFVFYRADGTST-FVNNPTA-AMSQDELSGRVAAL 134 (136)
T ss_dssp SSSEEEEECTTSCEE-EECCSSS-CCCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCcEE-EEEcCCC-ccCHHHHHHHHHHH
Confidence 999999996444323 566 5 68999999999875
No 122
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.46 E-value=6.2e-14 Score=126.69 Aligned_cols=82 Identities=15% Similarity=0.143 Sum_probs=68.3
Q ss_pred eeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCC---CCCC
Q 012452 353 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQ---LGSF 429 (463)
Q Consensus 353 V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~---I~~~ 429 (463)
...++++.+..+.. ..+++++|+|||+||++|+.+.|.++++++.+++ +.|+.||.|.+ ++++ .+|. |.++
T Consensus 38 ~~~~~~~~~~~l~~--~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~--v~~~~v~~d~~-~~~~-~~~~~~~v~~i 111 (167)
T 1z6n_A 38 SNGLPSALTERLQR--IERRYRLLVAGEMWCPDCQINLAALDFAQRLQPN--IELAIISKGRA-EDDL-RQRLALERIAI 111 (167)
T ss_dssp HHCCCHHHHHHHHT--CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTT--EEEEEECHHHH-HHHT-TTTTTCSSCCS
T ss_pred ccCCCHHHHHHHHH--hCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCC--cEEEEEECCCC-HHHH-HHHHHcCCCCc
Confidence 34456666655432 2468999999999999999999999999998754 99999999988 8888 8887 9999
Q ss_pred CEEEEEeCCCc
Q 012452 430 PTILFFPKHSS 440 (463)
Q Consensus 430 PTi~~f~~g~~ 440 (463)
||+++|++|+.
T Consensus 112 Pt~i~~~~~G~ 122 (167)
T 1z6n_A 112 PLVLVLDEEFN 122 (167)
T ss_dssp SEEEEECTTCC
T ss_pred CeEEEECCCCC
Confidence 99999998754
No 123
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.46 E-value=4.1e-13 Score=149.01 Aligned_cols=109 Identities=24% Similarity=0.480 Sum_probs=96.7
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
+.|..|+.++|++++...+.++.++|.||||||++|+.+.|.|+++|+.+++ ++.|+.+||+.+ ..+| ++|+|.++|
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~-~v~~~~vd~~~~-~~l~-~~~~v~~~P 619 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG-LINVGSVDCGQY-HSFC-TQENVQRYP 619 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TSEEEEEETTTT-HHHH-HHTTCCSSS
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC-CeEEEEEECcch-HHHH-HHcCCCCCC
Confidence 6799999999999886333467899999999999999999999999999998 799999999999 9999 899999999
Q ss_pred EEEEEeCCCc---CeeecCCCCCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSS---KPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~---~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|+++|+.|.. .++.|.|..++.++|.+||++.
T Consensus 620 ti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~ 654 (780)
T 3apo_A 620 EIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGF 654 (780)
T ss_dssp EEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTT
T ss_pred eEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhh
Confidence 9999988764 3677877468999999999864
No 124
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.45 E-value=4e-14 Score=118.14 Aligned_cols=75 Identities=16% Similarity=0.289 Sum_probs=62.0
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC------CCcHHHHHHcCCCCCCCEEEEEeCCCcCee
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------GDQKEYAKQKLQLGSFPTILFFPKHSSKPI 443 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d------~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~ 443 (463)
.+++++|+|||+||++|+.+.|.|+++++.++ .||++ .+ ++++ ++|+|.++||+++ +|+
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~~~~-~~l~-~~~~V~~~PT~~i--~G~---- 75 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTWII--NGR---- 75 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTTSCC-CHHH-HHTTCCSSSEEEE--TTE----
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEecccccchh-HHHH-HHcCCeEeCEEEE--CCE----
Confidence 35778999999999999999999999986663 45555 45 8999 9999999999877 664
Q ss_pred ecCCCCCCHHHHHHHHH
Q 012452 444 KYPSERRDVDSLMAFVD 460 (463)
Q Consensus 444 ~y~gg~~~~~~L~~fI~ 460 (463)
.|.| .++.++|.+|+.
T Consensus 76 ~~~G-~~~~~~l~~~~~ 91 (106)
T 3kp8_A 76 TYTG-VRSLEALAVASG 91 (106)
T ss_dssp EEES-CCCHHHHHHHHT
T ss_pred EecC-CCCHHHHHHHhC
Confidence 2666 799999999874
No 125
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.45 E-value=4.2e-14 Score=127.20 Aligned_cols=97 Identities=18% Similarity=0.342 Sum_probs=74.3
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-HHHHcCCC--CCCCEEEEE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-YAKQKLQL--GSFPTILFF 435 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~-l~~~~~~I--~~~PTi~~f 435 (463)
++|+.... .++++||+|||+||++|+.+.|.|+++++.+.. ++.|+.||++.+ .+ ++ ..|++ .++||+++|
T Consensus 37 ~~~~~~~~---~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~-~~~~~-~~~~~~~~~~Pt~~~~ 110 (164)
T 1sen_A 37 DGKKEAAA---SGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDE-EEPKD-EDFSPDGGYIPRILFL 110 (164)
T ss_dssp HHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGG-GSCSC-GGGCTTCSCSSEEEEE
T ss_pred HHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCC-chHHH-HHhcccCCcCCeEEEE
Confidence 55665554 789999999999999999999999998776654 467888888877 55 67 78888 669999999
Q ss_pred -eCCCcCeeecCCC---------CCCHHHHHHHHHHh
Q 012452 436 -PKHSSKPIKYPSE---------RRDVDSLMAFVDAL 462 (463)
Q Consensus 436 -~~g~~~~~~y~gg---------~~~~~~L~~fI~~l 462 (463)
++|+. ...+.|. ..+.++|.++|+++
T Consensus 111 d~~G~~-~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 111 DPSGKV-HPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp CTTSCB-CTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred CCCCCE-EEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 56663 2233331 26888999888764
No 126
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.44 E-value=4.4e-13 Score=128.34 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=78.7
Q ss_pred ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhc--C-CCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012452 357 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLA--G-NGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 433 (463)
Q Consensus 357 t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~--~-~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~ 433 (463)
+++.++.+.. ..++.+|++||||||++|+.+.|.|++++..+. + .++.++.||++.+ ++++ ++|+|.++||++
T Consensus 126 ~~~~~~~~~~--~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~-~~~~-~~~~V~~vPt~~ 201 (243)
T 2hls_A 126 EDATKEALKS--LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYEN-PDIA-DKYGVMSVPSIA 201 (243)
T ss_dssp CHHHHHHHHH--CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTC-HHHH-HHTTCCSSSEEE
T ss_pred CHHHHHHHHH--cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccC-HHHH-HHcCCeeeCeEE
Confidence 3445555433 246678999999999999999999999999983 1 3699999999999 9999 899999999998
Q ss_pred EEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 434 FFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 434 ~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+ +|+ . .|.| .++.++|.++|++.
T Consensus 202 i--~G~--~-~~~G-~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 202 I--NGY--L-VFVG-VPYEEDFLDYVKSA 224 (243)
T ss_dssp E--TTE--E-EEES-CCCHHHHHHHHHHH
T ss_pred E--CCE--E-EEeC-CCCHHHHHHHHHHH
Confidence 8 665 3 3776 68999999999864
No 127
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.44 E-value=4e-13 Score=114.65 Aligned_cols=87 Identities=22% Similarity=0.279 Sum_probs=74.6
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------CcHHHHHHcCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----------------------DQKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-----------------------~~~~l~~~~~~I 426 (463)
.+++++|+||++||++|+.+.|.+.+++++++ ++.|+.|+++. + .+++ +.|+|
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i 99 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTD-GSVW-ANFGV 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTT-CHHH-HHTTC
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCC-cHHH-HHcCC
Confidence 57899999999999999999999999999997 59999999854 3 6788 89999
Q ss_pred CCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 427 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++|++++|++++. .+.+.| ..+.++|.++|+++
T Consensus 100 ~~~P~~~~id~~g~-i~~~~g-~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 100 TQQPAYAFVDPHGN-VDVVRG-RMSQDELTRRVTAL 133 (136)
T ss_dssp CSSSEEEEECTTCC-EEEEES-CCCHHHHHHHHHHH
T ss_pred CCCceEEEECCCCC-EEEEec-CCCHHHHHHHHHHH
Confidence 99999999964443 336666 68999999999875
No 128
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.43 E-value=8e-14 Score=117.89 Aligned_cols=87 Identities=11% Similarity=0.198 Sum_probs=67.1
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC----CCeEEEEEEcCCCc-HHHHHHcCCCCCCCEEEEEeCCCcCeee
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG----NGVKVGKFRADGDQ-KEYAKQKLQLGSFPTILFFPKHSSKPIK 444 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~----~~v~f~~VD~d~~~-~~l~~~~~~I~~~PTi~~f~~g~~~~~~ 444 (463)
+...+||+|||+||++|+.|.+.+.. .+.. ..+.+++||++.+. .+++ .+|+|.++|||+||++|+. ...
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~---~~~~~a~~~~~~l~~vdv~~~~~~~la-~~~~V~g~PT~i~f~~G~e-v~R 91 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAP---QYPLTDEGRAAPVQRLQMRDPLPPGLE-LARPVTFTPTFVLMAGDVE-SGR 91 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTT---TGGGSHHHHHSCEEEEETTSCCCTTCB-CSSCCCSSSEEEEEETTEE-EEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHh---hHHHhhhcccceEEEEECCCCCchhHH-HHCCCCCCCEEEEEECCEE-Eee
Confidence 45789999999999999999875433 2322 12778999998862 4788 8999999999999998874 344
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 012452 445 YPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 445 y~gg~~~~~~L~~fI~~l 462 (463)
..| ....+.|.++|+.+
T Consensus 92 i~G-~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 92 LEG-YPGEDFFWPMLARL 108 (116)
T ss_dssp EEC-CCCHHHHHHHHHHH
T ss_pred ecC-CCCHHHHHHHHHHH
Confidence 455 79999999999864
No 129
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.43 E-value=4e-13 Score=117.79 Aligned_cols=91 Identities=8% Similarity=0.249 Sum_probs=76.9
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------cHHHHHHcCCCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLGS 428 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------~~~l~~~~~~I~~ 428 (463)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++.. +..++ +.|+|.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVL-DAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHH-HHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHH-HhcCCCC
Confidence 5789999999999999999999999999999875799999999763 14788 8999999
Q ss_pred CCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 429 FPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+||+++++.++.....+.| ..+.++|.++|+++
T Consensus 104 ~P~~~lid~~G~i~~~~~G-~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTG-TMTESMIHDYMNLI 136 (151)
T ss_dssp SCEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred CCeEEEECCCCcEEEEEeC-CCCHHHHHHHHHHH
Confidence 9999999554443445555 68999999999876
No 130
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.42 E-value=3.6e-13 Score=126.48 Aligned_cols=100 Identities=15% Similarity=0.234 Sum_probs=80.8
Q ss_pred hhhHHHHHhhcCCCCcEEEEEecC-CChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC--CcHHHHHHcCCCCCCCEEEE
Q 012452 358 RTGMENLARLDHRQEPWLVVLYAP-WCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQKEYAKQKLQLGSFPTILF 434 (463)
Q Consensus 358 ~~~f~~~i~~~~~~k~vlV~FyA~-wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~--~~~~l~~~~~~I~~~PTi~~ 434 (463)
.+++++++.....+..++|+||++ ||++|+.+.|.|+++++. .+ ++.|+.||++. + ++++ ++|+|.++||+++
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~~~~~-~~~~-~~~~v~~~Pt~~~ 84 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFDTPEG-KELA-KRYRIDRAPATTI 84 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETTSHHH-HHHH-HHTTCCSSSEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCCCccc-HHHH-HHcCCCcCceEEE
Confidence 355666652123456778999999 999999999999999865 34 69999999998 7 9999 9999999999999
Q ss_pred EeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 435 FPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 435 f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|++|+.....|.| ..+.+++.+|+..+
T Consensus 85 ~~~g~~~~~~~~G-~~~~~~l~~~l~~~ 111 (226)
T 1a8l_A 85 TQDGKDFGVRYFG-LPAGHEFAAFLEDI 111 (226)
T ss_dssp EETTBCCSEEEES-CCCTTHHHHHHHHH
T ss_pred EcCCceeeEEEec-cCcHHHHHHHHHHH
Confidence 9988754467776 57778888888753
No 131
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.42 E-value=5.2e-13 Score=115.43 Aligned_cols=88 Identities=11% Similarity=0.272 Sum_probs=75.1
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-------------------------CcHHHHHHcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------------------------DQKEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-------------------------~~~~l~~~~~ 424 (463)
.++++||+||++||++|+.+.|.+.++++++++.++.|+.|+++. + ..++ +.|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~ 110 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSK-GELM-KEY 110 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSS-SHHH-HHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCc-hhHH-Hhc
Confidence 678999999999999999999999999999985579999999964 4 6888 899
Q ss_pred CCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHH
Q 012452 425 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 460 (463)
Q Consensus 425 ~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~ 460 (463)
+|.++|++++++.++.....+.| ..+.++|.++|+
T Consensus 111 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~ 145 (145)
T 3erw_A 111 HIITIPTSFLLNEKGEIEKTKIG-PMTAEQLKEWTE 145 (145)
T ss_dssp TCCEESEEEEECTTCCEEEEEES-CCCHHHHHHHHC
T ss_pred CcCccCeEEEEcCCCcEEEEEcC-CcCHHHHHHhhC
Confidence 99999999999554443455666 689999998874
No 132
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.42 E-value=2.5e-13 Score=120.55 Aligned_cols=105 Identities=14% Similarity=0.260 Sum_probs=81.6
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC------------------
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------ 413 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d------------------ 413 (463)
.+..++++.+.... ..++++||+||++||++|+.+.|.|.+++++|++.++.|+.|+++
T Consensus 22 ~l~~~~g~~~~~~~---~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~ 98 (164)
T 2h30_A 22 TMKTADNRPASVYL---KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGL 98 (164)
T ss_dssp TCEETTSSBGGGGC---CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTS
T ss_pred ccCCCCCCEeeHHH---hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhC
Confidence 46666666655432 267899999999999999999999999999986556777776643
Q ss_pred ----------CCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 414 ----------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 414 ----------~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+ .+++ ++|+|.++||+++++.++.....+.| ..+.++|.++|+++
T Consensus 99 ~~~~~~~~~d~~-~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 99 NYPKLPVVTDNG-GTIA-QNLNISVYPSWALIGKDGDVQRIVKG-SINEAQALALIRNP 154 (164)
T ss_dssp CCTTSCEEECTT-CHHH-HHTTCCSSSEEEEECTTSCEEEEEES-CCCHHHHHHHHHCT
T ss_pred CCCcceEEEcCc-hHHH-HHcCCCccceEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 33 6788 89999999999999544433445555 68999999999875
No 133
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.41 E-value=7.4e-14 Score=124.06 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=51.4
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHH---HHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEe-CCCc
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELA---DKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFP-KHSS 440 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la---~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~-~g~~ 440 (463)
.+++|||+|||+||++|+.|.|.+.+.. +... ..|+.||+|.+..+++ .+|+|.++||++||+ +|+.
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---~~fv~V~vD~e~~~~~-~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---NKFIMLNLMHETTDKN-LSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---HTCEEEEESSCCSCGG-GCTTCCCSSEEEEECTTSCB
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---cCeEEEEecCCchhhH-hhcCCCCCCEEEEECCCCCE
Confidence 6899999999999999999999998643 2222 2355556543324667 799999999999998 6663
No 134
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.41 E-value=4.9e-13 Score=103.59 Aligned_cols=74 Identities=15% Similarity=0.252 Sum_probs=63.9
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCC-CH
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERR-DV 452 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~-~~ 452 (463)
..|.|||+||++|+.+.|.++++++++.+ ++.++.|| + .+++ ++|+|.++||+++ +|+ .+.. | .. +.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v~---~-~~~~-~~~~v~~~Pt~~~--~G~--~~~~-G-~~~~~ 69 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKIK---E-MDQI-LEAGLTALPGLAV--DGE--LKIM-G-RVASK 69 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEEC---S-HHHH-HHHTCSSSSCEEE--TTE--EEEC-S-SCCCH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEec---C-HHHH-HHCCCCcCCEEEE--CCE--EEEc-C-CCCCH
Confidence 46899999999999999999999999986 69999998 5 8899 8999999999998 666 4444 5 66 89
Q ss_pred HHHHHHH
Q 012452 453 DSLMAFV 459 (463)
Q Consensus 453 ~~L~~fI 459 (463)
++|.++|
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998875
No 135
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.41 E-value=1.1e-12 Score=115.76 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=75.2
Q ss_pred CCCcEEEEEecCCChhHHH-hHHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCcHH--
Q 012452 370 RQEPWLVVLYAPWCQFCQA-MEGSYVELADKLAGNGVKVGKFRAD----------------------------GDQKE-- 418 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~-~~p~l~~la~~~~~~~v~f~~VD~d----------------------------~~~~~-- 418 (463)
.++++||+||++||++|+. +.|.+.+++++|++.++.|+.|+++ .. ..
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMP-REGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCc-cccc
Confidence 5799999999999999999 6999999999998767999999863 22 33
Q ss_pred ----HHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 419 ----YAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 419 ----l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++ +.|+|.++|+++++++.+.....+.| ..+.+.|.++|+++
T Consensus 108 ~~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 153 (160)
T 3lor_A 108 RIPSTM-KKYRLEGTPSIILADRKGRIRQVQFG-QVDDFVLGLLLGSL 153 (160)
T ss_dssp SSCHHH-HHTTCCSSSEEEEECTTSBEEEEEES-CCCHHHHHHHHHHH
T ss_pred hhhhHH-HhcccCccceEEEECCCCcEEEEecC-cCCHHHHHHHHHHH
Confidence 88 89999999999999755544455556 68899999999875
No 136
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.41 E-value=2.9e-13 Score=122.86 Aligned_cols=80 Identities=13% Similarity=0.273 Sum_probs=67.7
Q ss_pred eecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHH-H--HHHHHHhcCCCeEEEEEEcCCCcHHHHHHcC------
Q 012452 354 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGS-Y--VELADKLAGNGVKVGKFRADGDQKEYAKQKL------ 424 (463)
Q Consensus 354 ~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~-l--~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~------ 424 (463)
....++.|+.... ++++|||+|||+||++|+.|.|. | .++++.+++ ++.+++||.++. +++. +.|
T Consensus 25 ~~~~~ea~~~A~~---~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~de~-~~l~-~~y~~~~q~ 98 (173)
T 3ira_A 25 YPWGEEAFEKARK---ENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDREER-PDID-NIYMTVCQI 98 (173)
T ss_dssp BCSSHHHHHHHHH---HTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETTTC-HHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHH---hCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCccc-CcHH-HHHHHHHHH
Confidence 3445678887766 79999999999999999999993 4 577887766 699999999998 9988 777
Q ss_pred --CCCCCCEEEEEe-CCC
Q 012452 425 --QLGSFPTILFFP-KHS 439 (463)
Q Consensus 425 --~I~~~PTi~~f~-~g~ 439 (463)
+|.++||++||+ +|+
T Consensus 99 ~~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 99 ILGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HHSCCCSSEEEEECTTSC
T ss_pred HcCCCCCcceeeECCCCC
Confidence 899999999997 555
No 137
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.41 E-value=1.3e-12 Score=115.84 Aligned_cols=91 Identities=15% Similarity=0.333 Sum_probs=75.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-------------------CcHHHHHHcCCCCCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------------------DQKEYAKQKLQLGSFP 430 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-------------------~~~~l~~~~~~I~~~P 430 (463)
.++++||+||++||++|+.+.|.+.++++++++.++.|+.|+++. + .+++ +.|+|.++|
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDAT-GQVQ-QRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTT-SHHH-HHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECch-HHHH-HHhCCCCcc
Confidence 578999999999999999999999999999986679999999987 4 6888 899999999
Q ss_pred EEEEEeCCCcCeeecCCC-CCCHHHHHHHHHHh
Q 012452 431 TILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 462 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg-~~~~~~L~~fI~~l 462 (463)
++++++.++.+...+.|. ..+.+++.+.+++.
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhh
Confidence 999886555544555553 45677788777654
No 138
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.40 E-value=4.8e-13 Score=116.19 Aligned_cols=89 Identities=12% Similarity=0.206 Sum_probs=73.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-------------------------HHHHcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-------------------------YAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~-------------------------l~~~~~ 424 (463)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++.+ .+ ++ +.|
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~ 107 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK-DEEWLKFIRSKKIGGWLNVRDSKNHTDFK-ITY 107 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS-SHHHHHHHHHHTCTTSEEEECTTCCCCHH-HHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC-HHHHHHHHHHcCCCCceEEeccccchhHH-Hhc
Confidence 5789999999999999999999999999999876699999999977 55 88 899
Q ss_pred CCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHH
Q 012452 425 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 425 ~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~ 461 (463)
+|.++|++++++.++.....+.| ..+.+++.+.+.+
T Consensus 108 ~i~~~P~~~lid~~G~i~~~~~g-~~~~~~~l~~l~~ 143 (148)
T 3hcz_A 108 DIYATPVLYVLDKNKVIIAKRIG-YENLDDFLVQYEK 143 (148)
T ss_dssp CCCSSCEEEEECTTCBEEEESCC-GGGHHHHHHHHHH
T ss_pred CcCCCCEEEEECCCCcEEEecCC-HHHHHHHHHHHHH
Confidence 99999999999655544455555 5666666666544
No 139
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.40 E-value=9.9e-13 Score=123.90 Aligned_cols=99 Identities=19% Similarity=0.310 Sum_probs=79.6
Q ss_pred hhHHHHHhhcCCCCcEEEEEe-----cCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCCCCCEE
Q 012452 359 TGMENLARLDHRQEPWLVVLY-----APWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPTI 432 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~Fy-----A~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi 432 (463)
+.+.+++. .+..++++|.|| +|||++|+.+.|.|.++++.+.+ .++.|++|||+.+ +++| ++|+|+++||+
T Consensus 9 ~~l~~~~~-~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~-~~l~-~~~~v~~~Ptl 85 (229)
T 2ywm_A 9 MQLKELAQ-KEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTH-KEET-EKYGVDRVPTI 85 (229)
T ss_dssp HHHHHHHH-HHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTC-HHHH-HHTTCCBSSEE
T ss_pred HHHHHHHH-HhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCccc-HHHH-HHcCCCcCcEE
Confidence 44555551 124567776666 89999999999999999988832 3799999999999 9999 99999999999
Q ss_pred EEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 433 LFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 433 ~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|++|. ....|.| .++.++|..|+..+
T Consensus 86 ~~~~~~~-~~~~~~G-~~~~~~l~~~~~~~ 113 (229)
T 2ywm_A 86 VIEGDKD-YGIRYIG-LPAGLEFTTLINGI 113 (229)
T ss_dssp EEESSSC-CCEEEES-CCCTTHHHHHHHHH
T ss_pred EEECCCc-ccceecC-CccHHHHHHHHHHH
Confidence 9998554 3678887 68888899988753
No 140
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.39 E-value=1e-12 Score=111.92 Aligned_cols=90 Identities=19% Similarity=0.312 Sum_probs=74.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc----------------------------CCCcHHHHH
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA----------------------------DGDQKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~----------------------------d~~~~~l~~ 421 (463)
.++++||+||++||++|+.+.|.+.++++++++ ++.++.|++ +.+ ..++
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~- 97 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPS-GKLL- 97 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTT-CHHH-
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcc-hHHH-
Confidence 578999999999999999999999999999765 799999954 223 5788
Q ss_pred HcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHhC
Q 012452 422 QKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 463 (463)
Q Consensus 422 ~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l~ 463 (463)
+.|+|.++|++++++.++.....+.| ..+.++|.++|+++.
T Consensus 98 ~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l~ 138 (138)
T 4evm_A 98 ETYGVRSYPTQAFIDKEGKLVKTHPG-FMEKDAILQTLKELA 138 (138)
T ss_dssp HHTTCCSSSEEEEECTTCCEEEEEES-CCCHHHHHHHHHHCC
T ss_pred HHcCcccCCeEEEECCCCcEEEeecC-CCcHHHHHHHHHhhC
Confidence 89999999999999544443455555 689999999999864
No 141
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.39 E-value=1.3e-12 Score=113.36 Aligned_cols=88 Identities=17% Similarity=0.265 Sum_probs=73.0
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHh-cCCCeEEEEEEcCCC------------------------cHHHHHHcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL-AGNGVKVGKFRADGD------------------------QKEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~-~~~~v~f~~VD~d~~------------------------~~~l~~~~~ 424 (463)
.++++||+||++||++|+.+.|.+.++++++ .+.++.|+.|+++.. +..++ +.|
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETA-KQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-HHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHH-Hhc
Confidence 5789999999999999999999999999999 665699999999874 13788 899
Q ss_pred CCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|.++|++++++.++. +.+.. .+.++|.++|+++
T Consensus 111 ~v~~~P~~~lid~~G~--i~~~~--~~~~~l~~~l~~l 144 (148)
T 3fkf_A 111 AILTLPTNILLSPTGK--ILARD--IQGEALTGKLKEL 144 (148)
T ss_dssp TCCSSSEEEEECTTSB--EEEES--CCHHHHHHHHHHH
T ss_pred CCCCcCEEEEECCCCe--EEEec--CCHHHHHHHHHHH
Confidence 9999999999965543 22222 2788899988875
No 142
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.39 E-value=8.9e-13 Score=114.59 Aligned_cols=86 Identities=16% Similarity=0.286 Sum_probs=71.5
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHH---HHHHhcCCCeEEEEEEcCCCcHH------------------------HHHH
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVE---LADKLAGNGVKVGKFRADGDQKE------------------------YAKQ 422 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~---la~~~~~~~v~f~~VD~d~~~~~------------------------l~~~ 422 (463)
.++++||+|||+||++|+.+.|.+.+ +.+++++.++.|+.|+.|.+ .+ +. +
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 107 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEE-LDEWKKHRNDFAKEWTNGYDKELVIKNK-N 107 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSC-HHHHHHHGGGSCTTSEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCC-HHHHHHHHHhcccccccccCccchhhhh-h
Confidence 47999999999999999999999999 99999776899999999876 33 35 7
Q ss_pred cCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHH
Q 012452 423 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 423 ~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~ 461 (463)
.|+|.++||++++++.+. +.+.+ .+.++|.+||++
T Consensus 108 ~~~v~~~P~~~lid~~G~--i~~~~--~~~~~l~~~l~e 142 (142)
T 3eur_A 108 LYDLRAIPTLYLLDKNKT--VLLKD--ATLQKVEQYLAE 142 (142)
T ss_dssp CSCCTTCSEEEEECTTCB--EEEEE--ECHHHHHHHHHC
T ss_pred hcCCCcCCeEEEECCCCc--EEecC--CCHHHHHHHHhC
Confidence 899999999999976664 33332 357899999874
No 143
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.38 E-value=1.6e-12 Score=113.93 Aligned_cols=90 Identities=19% Similarity=0.276 Sum_probs=75.3
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc-----------------------CCCcHHHHHHcCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA-----------------------DGDQKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~-----------------------d~~~~~l~~~~~~I 426 (463)
.++++||+||++||++|+.+.|.+.++++++++.++.|+.|+. +.+ ..++ +.|+|
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~i 104 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDAD-KAVG-QAFGT 104 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSS-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCch-HHHH-HHcCC
Confidence 5789999999999999999999999999999876688888774 334 6788 89999
Q ss_pred CCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 427 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++|++++++.++.....+.| ..+.++|.++|+++
T Consensus 105 ~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 105 QVYPTSVLIGKKGEILKTYVG-EPDFGKLYQEIDTA 139 (153)
T ss_dssp CSSSEEEEECSSSCCCEEEES-SCCHHHHHHHHHHH
T ss_pred CccCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 999999999544443455666 68999999999875
No 144
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.38 E-value=2.1e-12 Score=113.88 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=75.1
Q ss_pred CCCcEEEEEecCCChhHHHh-HHHHHHHHHHhcCCCeEEEEEEcC----------------------------CCcH---
Q 012452 370 RQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRAD----------------------------GDQK--- 417 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~-~p~l~~la~~~~~~~v~f~~VD~d----------------------------~~~~--- 417 (463)
.++++||+||++||++|+.+ .|.+.+++++|++.++.|+.|+++ .. .
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQP-GDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECC-CSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCc-cchh
Confidence 57999999999999999996 999999999998667999999864 22 2
Q ss_pred --HHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 418 --EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 418 --~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++ +.|+|.++|+++++++++.....+.| ..+.++|.++|+++
T Consensus 106 ~~~~~-~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 106 MPRTM-AAYQMRGTPSLLLIDKAGDLRAHHFG-DVSELLLGAEIATL 150 (158)
T ss_dssp SCHHH-HHTTCCSSSEEEEECTTSEEEEEEES-CCCHHHHHHHHHHH
T ss_pred hHHHH-HHcCCCCCCEEEEECCCCCEEEEEeC-CCCHHHHHHHHHHH
Confidence 578 89999999999999655544455555 68899999999875
No 145
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.38 E-value=1.6e-12 Score=113.75 Aligned_cols=90 Identities=16% Similarity=0.327 Sum_probs=76.1
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcH-----------------------HHHHHcCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK-----------------------EYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~-----------------------~l~~~~~~I 426 (463)
.++++||+||++||++|+.+.|.+.++.+++.+.++.|+.|+++.+ . +++ +.|+|
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v 106 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKN-KKAWENMVTKDQLKGIQLHMGTDRTFM-DAYLI 106 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSC-HHHHHHHHHHHTCCSEEEECSSCTHHH-HHTTC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCc-HHHHHHHHHhcCCCCceeecCcchhHH-HHcCc
Confidence 5789999999999999999999999999999876799999999876 4 688 89999
Q ss_pred CCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 427 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++|++++++..+.....+.| ..+.++|.++|+++
T Consensus 107 ~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 107 NGIPRFILLDRDGKIISANMT-RPSDPKTAEKFNEL 141 (152)
T ss_dssp CSSCCEEEECTTSCEEESSCC-CTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCeEEEccCC-CCCHHHHHHHHHHH
Confidence 999999999844332334444 68889999999875
No 146
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.37 E-value=1.2e-12 Score=113.32 Aligned_cols=87 Identities=16% Similarity=0.381 Sum_probs=71.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHH---HHHHhcCCCeEEEEEEcCCCcHHH------------------------HHH
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVE---LADKLAGNGVKVGKFRADGDQKEY------------------------AKQ 422 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~---la~~~~~~~v~f~~VD~d~~~~~l------------------------~~~ 422 (463)
.++++||+||++||++|+.+.|.+.+ +.+++++.++.|+.|++|.+ .+. . +
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 103 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDEN-REEWATKAVYMPQGWIVGWNKAGDIRTR-Q 103 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSC-HHHHHHHHTTSCTTCEEEECTTCHHHHT-T
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCC-HHHHHHHHHHcCCCcceeeCCccchhhH-H
Confidence 57999999999999999999999998 89998766799999999876 433 2 3
Q ss_pred cCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 423 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.|+|.++|+++++++.+. +.+ + ..+.++|.++|+++
T Consensus 104 ~~~v~~~P~~~lid~~G~--i~~-~-~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKR--VIL-K-DTSMEQLIDYLATQ 139 (142)
T ss_dssp CSCCCSSSEEEEECTTCB--EEE-C-SCCHHHHHHHHHC-
T ss_pred HcCCCCCCeEEEECCCCC--EEe-c-CCCHHHHHHHHHHH
Confidence 899999999999965553 333 2 47899999999875
No 147
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.36 E-value=1.8e-12 Score=136.85 Aligned_cols=177 Identities=12% Similarity=0.108 Sum_probs=115.3
Q ss_pred HHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHH
Q 012452 102 IMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQAL 179 (463)
Q Consensus 102 il~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~ 179 (463)
.++++.+..+ ++++|++|||+||+++ +|+.+.+.++.++|+|+|...++..+.++++++++|++++++..+.. +...
T Consensus 199 ~i~~ir~~~~~~kvvvalSGGvDSsvla~ll~~~g~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~~~~-f~~~ 277 (503)
T 2ywb_A 199 LLREVRERAGKDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKER-FLKA 277 (503)
T ss_dssp HHHHHHHHHTTSEEEEEECSSHHHHHHHHHHHHHTCEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEECHHH-HHHH
T ss_pred HHHhhhhhccCccEEEEecCCcchHHHHHHHHHcCCeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEECcHH-HHHh
Confidence 3444444444 5799999999998766 88888888899999999988888999999999999999988865432 2221
Q ss_pred HHhcCCCCCCccchhhhhhchhhhHHHHHHc---cCceEEEeeeccC-CcccccC--CCceecCCCCcCCcCCCCCeEEE
Q 012452 180 VRSKGLFSFYEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQ-SPGTRSE--IPVVQVDPVFEGLEGGVGSLVKW 253 (463)
Q Consensus 180 ~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~---~~~~~itG~Rr~E-S~~~Ra~--~~~~~~d~~~~~~~~~~~~~~k~ 253 (463)
..|.. .+......| ...+...+.+..+ +.+.+++|+..++ +. +|.. ...+.......+.. ...+...+
T Consensus 278 --l~g~~-~pe~~r~~~-~~~~~~~l~~~A~~~~g~~~la~G~~~~D~~E-t~~~g~~~~iks~~~l~~l~-~~~~~~ii 351 (503)
T 2ywb_A 278 --LKGVE-DPEEKRKII-GREFVAAFSQVARERGPFRFLAQGTLYPDVIE-SAGGHGAAKIKSHHNVGGLP-EDLEFELL 351 (503)
T ss_dssp --HTTCC-CHHHHHHHH-HHHHHHHHHHHHHHHCCCSEEECCCCHHHHHC------------------CCC-SSCCCEEE
T ss_pred --hcCCC-ChHHHhhhh-hHHHHHHHHHHHHhcCCCCEEEECCcCccchh-hccCCccccccccccccccc-ccccCceE
Confidence 22321 121122233 3345667777555 5679999995432 21 2220 00000000000000 01235689
Q ss_pred EeCccCcHHHHHHHHHhCCCCccchhccCCcc
Q 012452 254 NPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 285 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy~s 285 (463)
+||.+|+.+||+.|.+++|+|++.++++.|..
T Consensus 352 ~PL~~l~K~EVr~~a~~~glp~~i~~~~P~~~ 383 (503)
T 2ywb_A 352 EPFRLLFKDEVRELALLLGLPDTLRLRHPFPG 383 (503)
T ss_dssp CTTTTCCHHHHHHHHHHTTCCHHHHSCCCCCT
T ss_pred ehhhcCCHHHHHHHHHHcCCChhheecCCCCC
Confidence 99999999999999999999999999987764
No 148
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.35 E-value=3.2e-12 Score=111.87 Aligned_cols=91 Identities=14% Similarity=0.223 Sum_probs=75.5
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcH----------------------HHHHHcCCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK----------------------EYAKQKLQLG 427 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~----------------------~l~~~~~~I~ 427 (463)
.++++||+||++||++|+.+.|.|.++++++++.++.|+.|+++.+ . +++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 104 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK-TGDAMKFLAQVPAEFTVAFDPKGQTP-RLYGVK 104 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS-HHHHHHHHHHSCCCSEEEECTTCHHH-HHTTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC-HHHHHHHHHHcCCCCceeECCcchhH-HHcCCC
Confidence 5789999999999999999999999999999886699999999876 4 677 789999
Q ss_pred CCCEEEEEeCCCcCeeecCCC-CCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~gg-~~~~~~L~~fI~~l 462 (463)
++|++++++.++.+...+.|. ..+.++|.++|+++
T Consensus 105 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 105 GMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp SSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHH
Confidence 999999996555434445442 34678999999876
No 149
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.35 E-value=2.1e-12 Score=113.51 Aligned_cols=88 Identities=16% Similarity=0.247 Sum_probs=71.0
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHcCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKLQ 425 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~------------------------~~~l~~~~~~ 425 (463)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|+++.. +.+++ +.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVL-ESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHH-HHhC
Confidence 5789999999999999999999999999999876799999999973 26788 8999
Q ss_pred CCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 426 LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
|.++||+++++.++.....+. +.++|.++|+++
T Consensus 107 v~~~P~~~lid~~G~i~~~~~----~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVAKEL----RGDDLYNTVEKF 139 (152)
T ss_dssp CCSSCEEEEECTTSEEEEECC----CTTHHHHHHHHH
T ss_pred CCcCCeEEEECCCCeEEEeeC----CHHHHHHHHHHH
Confidence 999999999965443233332 335677777654
No 150
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.34 E-value=4.6e-12 Score=114.95 Aligned_cols=90 Identities=13% Similarity=0.299 Sum_probs=73.3
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCe------EEEEEEcCC-CcHHHHHHcC------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGV------KVGKFRADG-DQKEYAKQKL------------------ 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v------~f~~VD~d~-~~~~l~~~~~------------------ 424 (463)
+++++||+||++||++|+.+.|.|.+++++|++.++ .|+.|+++. + .+.. ++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~-~~~~-~~~~~~~~~~~~~~~d~~~~~ 135 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYS-RDIA-QDFVTDNGLDYPSIYDPPFMT 135 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCC-HHHH-HHHHHHTTCCSCEEECTTCGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCC-HHHH-HHHHHHcCCCccEEECCcchH
Confidence 578999999999999999999999999999987558 999999998 5 5555 444
Q ss_pred -------CCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 -------QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 -------~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|.++|+++++.+.+.+...+.| ..+.++|.++|+++
T Consensus 136 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 136 AASLGGVPASVIPTTIVLDKQHRPAAVFLR-EVTSKDVLDVALPL 179 (183)
T ss_dssp GGGTTTCCTTCCSEEEEECTTSCEEEEECS-CCCHHHHHHHHHHH
T ss_pred HHHhccCCCCCCCeEEEECCCCcEEEEEcC-CCCHHHHHHHHHHH
Confidence 68999988888655443455666 68999999999875
No 151
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.32 E-value=4.6e-12 Score=111.23 Aligned_cols=85 Identities=19% Similarity=0.350 Sum_probs=72.8
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc---------------------------CCCcHHHHHHcC
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA---------------------------DGDQKEYAKQKL 424 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~---------------------------d~~~~~l~~~~~ 424 (463)
+++||+||++||++|+.+.|.+.++++++ + +.|+.|++ +.. ..++ +.|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~--v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~-~~~ 105 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-G--VPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP-HEVA-ARF 105 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C--CCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH-HHHH-TTS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-C--CeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch-HHHH-HHh
Confidence 89999999999999999999999999999 4 88999998 234 7788 899
Q ss_pred CCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|.++|++++++..+.....+.| ..+.++|.++|+++
T Consensus 106 ~v~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 106 KVLGQPWTFVVDREGKVVALFAG-RAGREALLDALLLA 142 (154)
T ss_dssp SBCSSCEEEEECTTSEEEEEEES-BCCHHHHHHHHHHT
T ss_pred CCCcccEEEEECCCCCEEEEEcC-CCCHHHHHHHHHhc
Confidence 99999999999655543455555 68999999999876
No 152
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.32 E-value=4.5e-12 Score=111.13 Aligned_cols=92 Identities=18% Similarity=0.306 Sum_probs=75.1
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc----------------------HHHHHHcCCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----------------------KEYAKQKLQLG 427 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~----------------------~~l~~~~~~I~ 427 (463)
.++++||+||++||++|+.+.|.+.++.+++.+.++.|+.|+++.+. ..++ +.|+|.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVG-KLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHH-HHhCCC
Confidence 57899999999999999999999999999998767999999998741 2377 789999
Q ss_pred CCCEEEEEeCCCcCeeecCCC-CCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~gg-~~~~~~L~~fI~~l 462 (463)
++|+++++..++.....+.|. ..+.++|.++|+++
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 106 GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC
T ss_pred CCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHH
Confidence 999888886555434455552 24778999999876
No 153
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.32 E-value=1e-11 Score=109.51 Aligned_cols=85 Identities=16% Similarity=0.282 Sum_probs=70.5
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH-----------------------HHHHcCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE-----------------------YAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~-----------------------l~~~~~~I 426 (463)
.++++||+||++||++|+.+.|.+.+++++|++.++.|+.|++|.. .+ +. +.|+|
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~v 111 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGD-EHFWKTSADNLPWVCVRDANGAYSSYI-SLYNV 111 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCC-HHHHHHHHTTCSSEEEECSSGGGCHHH-HHHTC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCC-HHHHHHHHhCCCceEEECCCCcchHHH-HHcCc
Confidence 4689999999999999999999999999999876799999999987 43 77 88999
Q ss_pred CCCCEEEEEeCCCcCeeecCCCCCCHHHHHH
Q 012452 427 GSFPTILFFPKHSSKPIKYPSERRDVDSLMA 457 (463)
Q Consensus 427 ~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~ 457 (463)
.++|++++++..+.+...+.| ..+.++...
T Consensus 112 ~~~P~~~lid~~G~i~~~~~g-~~~~e~~~~ 141 (152)
T 2lrt_A 112 TNLPSVFLVNRNNELSARGEN-IKDLDEAIK 141 (152)
T ss_dssp CSCSEEEEEETTTEEEEETTT-CSCHHHHHH
T ss_pred ccCceEEEECCCCeEEEecCC-HHHHHHHHH
Confidence 999999999755544455555 577666544
No 154
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.31 E-value=3.6e-12 Score=113.86 Aligned_cols=86 Identities=19% Similarity=0.336 Sum_probs=68.2
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc-----------------------CCCcHHHHHHcCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA-----------------------DGDQKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~-----------------------d~~~~~l~~~~~~I 426 (463)
.++++||+||++||++|+.+.|.+++++++ ++.|+.|++ |.+ ..++ +.|+|
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 123 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGD-GMLG-LDLGV 123 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETT-CHHH-HHHTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcc-hHHH-HHcCc
Confidence 689999999999999999999999999876 478888884 444 6788 89999
Q ss_pred CCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 427 GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++|+++++..++.....+.| ..+.+.|.++|+++
T Consensus 124 ~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 124 YGAPETFLIDGNGIIRYRHAG-DLNPRVWEEEIKPL 158 (168)
T ss_dssp CSSSEEEEECTTSBEEEEEES-CCCHHHHHHTTHHH
T ss_pred cccCEEEEECCCCeEEEEEeC-CCCHHHHHHHHHHH
Confidence 999977777644433445555 68888888887754
No 155
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=99.30 E-value=1e-11 Score=122.93 Aligned_cols=164 Identities=18% Similarity=0.241 Sum_probs=100.1
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcHHHHHHHHH-HHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDE-VEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 188 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~-~~~i~vi~~DTg~~fpeT~~~~~~-~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 188 (463)
++++|++|||+||+++ +|+.+. +.++.++|+|+|....+..+.+.+ +++++|++++++..+.. +... ..+.. .
T Consensus 21 ~kvlvalSGGvDSsvla~ll~~~~g~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-f~~~--l~~~~-~ 96 (308)
T 2dpl_A 21 SKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVDAQDR-FFSA--LKGVT-D 96 (308)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCCCTTHHHHHHHHHTTTTCCEEEEEECHHH-HHHH--TTTCC-C
T ss_pred CCEEEEEeChHHHHHHHHHHHHhhCCCEEEEEEcCCCCChHHHHHHHHHHHHHcCCcEEEEECCHH-HHHh--hhCCC-C
Confidence 6799999999998766 888776 778999999999865444445555 66789999988865421 2221 12221 1
Q ss_pred CccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEEEeCccCcHHHHHH
Q 012452 189 YEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWN 266 (463)
Q Consensus 189 ~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~ 266 (463)
+......||..+ ...+.+..+ +.+.+++|...++-..++..+..... ..+.. ...+...++||.+|+.+||+.
T Consensus 97 pe~~~~~~~~~~-~~~l~~~A~~~g~~~la~Gh~~dD~~Et~~~iks~~~---~~~l~-~~~~~~virPL~~l~K~EI~~ 171 (308)
T 2dpl_A 97 PEEKRKIIGRVF-IEVFEEVAKKIGAEYLIQGTIAPDWIESQGKIKSHHN---VGGLP-EKLNLKLIEPLRDLYKDEVRE 171 (308)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHTCSEEECCCCCC-------------------------CCCEEECTTTTCCHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHcCcCEEEECCCCccchhhccchhhhhc---cccCC-ccCCCeEEEEcccCCHHHHHH
Confidence 222223454433 344444443 56799999988754223322221100 00000 012466899999999999999
Q ss_pred HHHhCCCCccchhccCCc
Q 012452 267 FLRTMDVPINSLHSQGYI 284 (463)
Q Consensus 267 yi~~~~lp~npLy~~Gy~ 284 (463)
|.+++|+|++..+.+.|.
T Consensus 172 ~a~~~glp~~i~~~~P~~ 189 (308)
T 2dpl_A 172 LAKFLGLPEKIYNRMPFP 189 (308)
T ss_dssp HHHHTTCCHHHHTCCCCC
T ss_pred HHHHhCCCceeeecCCCC
Confidence 999999999877765543
No 156
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.30 E-value=4.1e-12 Score=105.94 Aligned_cols=78 Identities=19% Similarity=0.253 Sum_probs=68.5
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCC
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 451 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~ 451 (463)
...|++||++||++|+.+.|.++++++++ ++.|..||++++ +++. .+|++. +|++++|.+|+ .+ ..| ..+
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~---~i~~~~vDId~d-~~l~-~~ygv~-VP~l~~~~dG~--~v-~~g-~~~ 98 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS---WFELEVINIDGN-EHLT-RLYNDR-VPVLFAVNEDK--EL-CHY-FLD 98 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS---CCCCEEEETTTC-HHHH-HHSTTS-CSEEEETTTTE--EE-ECS-SCC
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc---CCeEEEEECCCC-HHHH-HHhCCC-CceEEEEECCE--EE-Eec-CCC
Confidence 36799999999999999999999999887 389999999998 9999 899997 99999999887 34 334 588
Q ss_pred HHHHHHHH
Q 012452 452 VDSLMAFV 459 (463)
Q Consensus 452 ~~~L~~fI 459 (463)
.++|.+||
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 89999887
No 157
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.30 E-value=1.5e-11 Score=107.69 Aligned_cols=88 Identities=15% Similarity=0.230 Sum_probs=72.0
Q ss_pred CCCcEEEEEecCCChh--HHHhHHHHHHHHHHh-cCCCeEEEEEEcCCCc------------------------HHHHHH
Q 012452 370 RQEPWLVVLYAPWCQF--CQAMEGSYVELADKL-AGNGVKVGKFRADGDQ------------------------KEYAKQ 422 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~--C~~~~p~l~~la~~~-~~~~v~f~~VD~d~~~------------------------~~l~~~ 422 (463)
.++++||+||++||++ |+.+.|.+.++.++| ++.++.|+.|++|... .+++ +
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVA-K 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHH-H
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHH-H
Confidence 5789999999999999 999999999999999 6667999999998761 2688 8
Q ss_pred cCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 423 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.|+|.++|+++++++.+.....+ .+.++|.+.|+++
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~~~----~~~~~l~~~l~~l 146 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKILAKN----LRGEELKKKIENI 146 (150)
T ss_dssp HTTCCSSSEEEEECTTSBEEEES----CCHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEEEEcc----CCHHHHHHHHHHH
Confidence 99999999999996555322222 2677888887764
No 158
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.29 E-value=5.5e-12 Score=110.70 Aligned_cols=88 Identities=14% Similarity=0.188 Sum_probs=69.4
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 427 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------~~~l~~~~~~I~ 427 (463)
.++++||+||++||++|+.+.|.+.+++++ + ++.|+.|+++.+ +..++ +.|+|.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRAS-IEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHH-HHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHH-HhcCcC
Confidence 478999999999999999999999998876 3 589999887532 14678 889999
Q ss_pred CCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|+++++..++.....+.| ..+.++|.++|+++
T Consensus 117 ~~P~~~~id~~G~i~~~~~g-~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 117 GVPETFVVGREGTIVYKLVG-PITPDNLRSVLLPQ 150 (156)
T ss_dssp SSCEEEEECTTSBEEEEEES-CCCHHHHHHTHHHH
T ss_pred ccCeEEEEcCCCCEEEEEeC-CCCHHHHHHHHHHH
Confidence 99988888544433444555 67888888888764
No 159
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=99.29 E-value=3e-11 Score=120.17 Aligned_cols=148 Identities=17% Similarity=0.148 Sum_probs=108.0
Q ss_pred CcEEEEechhHHHHHH-HHHHHc----CCC-eEEEEEeCCCC--cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhc
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLT----GRP-FRVFSLDTGRL--NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSK 183 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~----~~~-i~vi~~DTg~~--fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~ 183 (463)
++++|++|||+||++| +++.+. +.+ +.++|+|+|.. .++..++++++++++|++++++..+... +....
T Consensus 25 ~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~~v~~~~~~~---~~~~~ 101 (317)
T 1wy5_A 25 RRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRA---FAKEN 101 (317)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHH---HHHHT
T ss_pred CEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEEechh---hhccC
Confidence 5799999999999766 887764 567 88999999974 5789999999999999999888766432 22223
Q ss_pred CCCCCCccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCccc------ccCCC-cee-cCCCCcCCcCCCCCeEEE
Q 012452 184 GLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGT------RSEIP-VVQ-VDPVFEGLEGGVGSLVKW 253 (463)
Q Consensus 184 g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~------Ra~~~-~~~-~d~~~~~~~~~~~~~~k~ 253 (463)
+ .+...||...+...+.+..+ +.+.+++|...++...+ |..-. -+. ..+. ....+
T Consensus 102 ~------~~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~dD~~Et~l~~l~rg~g~~gl~~~~~~---------~~~ii 166 (317)
T 1wy5_A 102 R------MSLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDLLETSLLFFTRGTGLDGLIGFLPK---------EEVIR 166 (317)
T ss_dssp T------CCHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHHHHHHHHHHHHHHCCCHHHHHCSCSE---------ETTEE
T ss_pred C------CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeCchhHHHHHHHHHHHhCCCcccccCCCCC---------CCeEE
Confidence 3 13467888888888888776 56789999998874311 11100 000 0000 01468
Q ss_pred EeCccCcHHHHHHHHHhCCCCccc
Q 012452 254 NPVANVKGNDIWNFLRTMDVPINS 277 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~~lp~np 277 (463)
+||++|+.+||+.|.+++|+|+..
T Consensus 167 rPLl~~~k~eI~~~~~~~gl~~~~ 190 (317)
T 1wy5_A 167 RPLYYVKRSEIEEYAKFKGLRWVE 190 (317)
T ss_dssp CTTTTCCHHHHHHHHHHTTCCCCC
T ss_pred CCCccCCHHHHHHHHHHcCCCeeE
Confidence 999999999999999999999864
No 160
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.28 E-value=6.4e-12 Score=109.21 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=70.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc-------------------------HHHHHHcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ-------------------------KEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~-------------------------~~l~~~~~ 424 (463)
+++++||+||++||++|+.+.|.+.++.++|++.++.|+.|++|.+. ..++ +.|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELY-KKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHH-HHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHH-HHc
Confidence 57899999999999999999999999999998767999999988541 2467 789
Q ss_pred CCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 QLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+|.++|+++++++.+. .+.. . ...++|.++|+++
T Consensus 110 ~v~~~P~~~lid~~G~-i~~~-~--~~~~~l~~~l~~i 143 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGV-IIAA-N--VTPEKLTEILKAI 143 (143)
T ss_dssp TGGGCCCEEEECTTSB-EEEE-S--CCHHHHHHHHTC-
T ss_pred CCCCCCcEEEECCCCE-EEEc-c--CCHHHHHHHHHhC
Confidence 9999999999975543 3322 2 3578888888764
No 161
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.28 E-value=8.9e-12 Score=108.32 Aligned_cols=69 Identities=14% Similarity=0.221 Sum_probs=60.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHcCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 425 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~-----------------------~~~l~~~~~~ 425 (463)
.++++||+||++||++|+.+.|.|.++++++++ .++.|+.|++|.. +.+++ +.|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLT-TGFD 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHH-HHcC
Confidence 578999999999999999999999999999984 4799999999864 14688 8999
Q ss_pred CCCCCEEEEEe--CCC
Q 012452 426 LGSFPTILFFP--KHS 439 (463)
Q Consensus 426 I~~~PTi~~f~--~g~ 439 (463)
|.++||+++++ +|+
T Consensus 106 v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 106 VKSIPTLVGVEADSGN 121 (144)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCc
Confidence 99999999997 555
No 162
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.27 E-value=2.1e-11 Score=108.40 Aligned_cols=87 Identities=16% Similarity=0.272 Sum_probs=73.5
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC------------------CCc---------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------GDQ--------------- 416 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d------------------~~~--------------- 416 (463)
.++++||+||++||++|+.+.|.+.++.++++ ++.|+.|+++ .+.
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSW 113 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTS
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCe
Confidence 57999999999999999999999999999998 5999999998 330
Q ss_pred ------HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCC-CHHHHHHHHHHh
Q 012452 417 ------KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERR-DVDSLMAFVDAL 462 (463)
Q Consensus 417 ------~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~-~~~~L~~fI~~l 462 (463)
.+++ +.|+|.++||++++++++. .+. .| .. +.++|.++|+++
T Consensus 114 ~~~~d~~~~~-~~~~v~~~P~~~lid~~G~-i~~-~g-~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 114 IMVMDDGSLV-EKFNVRSIDYIVIMDKSSN-VLY-AG-TTPSLGELESVIKSV 162 (165)
T ss_dssp EEEECCSHHH-HHTTCCSSSEEEEEETTCC-EEE-EE-ESCCHHHHHHHHHHC
T ss_pred eEEeChHHHH-HHhCCCCceEEEEEcCCCc-EEE-eC-CCCCHHHHHHHHHHH
Confidence 1678 8999999999999965553 333 44 67 899999999876
No 163
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.26 E-value=7e-12 Score=100.68 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=61.9
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHH
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDS 454 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~ 454 (463)
|++||++||++|+.+.|.|++++..+ +.+||++++ ++++ ++|+++ +||+++ .+|+ .+. | ..+.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~-~~l~-~~~g~~-vPtl~~-~~G~--~v~--g-~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDD-AALE-SAYGLR-VPVLRD-PMGR--ELD--W-PFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTC-HHHH-HHHTTT-CSEEEC-TTCC--EEE--S-CCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCC-HHHH-HHhCCC-cCeEEE-ECCE--EEe--C-CCCHHH
Confidence 78899999999999999999875332 689999999 9999 899998 999998 7777 443 4 689999
Q ss_pred HHHHHHHh
Q 012452 455 LMAFVDAL 462 (463)
Q Consensus 455 L~~fI~~l 462 (463)
|.++|+++
T Consensus 68 L~~~l~~~ 75 (87)
T 1ttz_A 68 LRAWLDAA 75 (87)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 99999764
No 164
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.25 E-value=2.3e-11 Score=122.42 Aligned_cols=106 Identities=9% Similarity=0.167 Sum_probs=90.3
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d--~~~~~l~~~~~~I~~ 428 (463)
+.|.+++.+++..+.. ...++++|+||++||++|+.+.|.|+++|+++++ ++.|+.||++ .+ ..++ ++|+|.+
T Consensus 117 p~v~~~~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~-~i~f~~vd~~~~~~-~~~~-~~fgi~~ 191 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFIFIDSDHTDN-QRIL-EFFGLKK 191 (361)
T ss_dssp CSEEECSTTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT-TCEEEEECTTSGGG-HHHH-HHTTCCT
T ss_pred CcceecCcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccC-ceEEEEecCChHHH-HHHH-HHcCCCc
Confidence 4689999999998875 3456789999999999999999999999999998 7999999999 56 8999 9999988
Q ss_pred --CCEEEEEeCCCcCeeecC--CCCCCHHHHHHHHHHh
Q 012452 429 --FPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 462 (463)
Q Consensus 429 --~PTi~~f~~g~~~~~~y~--gg~~~~~~L~~fI~~l 462 (463)
+|++++|..++. ...|. ++..+.++|.+|++.+
T Consensus 192 ~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l~~fi~~~ 228 (361)
T 3uem_A 192 EECPAVRLITLEEE-MTKYKPESEELTAERITEFCHRF 228 (361)
T ss_dssp TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHH
T ss_pred cCCccEEEEEcCCc-ccccCCCccccCHHHHHHHHHHH
Confidence 999999998653 34554 4479999999999864
No 165
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.25 E-value=2e-11 Score=106.44 Aligned_cols=69 Identities=16% Similarity=0.288 Sum_probs=60.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHcCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 425 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~-----------------------~~~l~~~~~~ 425 (463)
.++++||+||++||++|+.+.|.|.++++++++ .++.|+.|++|.. +.+++ ++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLS-KHFN 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHH-HHTT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHH-HHhC
Confidence 578999999999999999999999999999983 4799999999864 14688 8999
Q ss_pred CCCCCEEEEEe--CCC
Q 012452 426 LGSFPTILFFP--KHS 439 (463)
Q Consensus 426 I~~~PTi~~f~--~g~ 439 (463)
|.++||+++++ +|+
T Consensus 106 v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 VESIPTLIGVDADSGD 121 (146)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCe
Confidence 99999999998 555
No 166
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.24 E-value=2.2e-11 Score=111.46 Aligned_cols=90 Identities=18% Similarity=0.297 Sum_probs=73.1
Q ss_pred CCC-cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCcHHH
Q 012452 370 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEY 419 (463)
Q Consensus 370 ~~k-~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d-----------------------------~~~~~l 419 (463)
.++ ++||+||++||++|+.+.|.+.++.+++.+.++.|+.|+++ .+ .++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~ 122 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDET-QEV 122 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-CHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCc-hHH
Confidence 455 59999999999999999999999999998756999999984 23 578
Q ss_pred HHHcCCCCCCCEEEEEeCCCcCeee---------cCCCCCCHHHHHHHHHHh
Q 012452 420 AKQKLQLGSFPTILFFPKHSSKPIK---------YPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 420 ~~~~~~I~~~PTi~~f~~g~~~~~~---------y~gg~~~~~~L~~fI~~l 462 (463)
+ +.|+|.++|+++++++++..... +.| ..+.++|.+.|+++
T Consensus 123 ~-~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g-~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 123 A-KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGI-PVTGESIRAALDAL 172 (196)
T ss_dssp H-HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCC-CCCCHHHHHHHHHH
T ss_pred H-HHhCCCCCCeEEEEcCCCeEEEccccCcccccccC-ccCHHHHHHHHHHH
Confidence 8 89999999999999655543333 233 57889999998865
No 167
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.24 E-value=1.9e-11 Score=105.94 Aligned_cols=69 Identities=17% Similarity=0.318 Sum_probs=60.5
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCC-----------------------cHHHHHHcCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGD-----------------------QKEYAKQKLQ 425 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~-----------------------~~~l~~~~~~ 425 (463)
.++++||+||++||++|+.+.|.+.++++++++ .++.|+.|++|.+ +.+++ +.|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELG-KTFG 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHH-HHcC
Confidence 578999999999999999999999999999983 4799999999874 14678 8999
Q ss_pred CCCCCEEEEEe--CCC
Q 012452 426 LGSFPTILFFP--KHS 439 (463)
Q Consensus 426 I~~~PTi~~f~--~g~ 439 (463)
|.++||+++++ +|+
T Consensus 106 v~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 106 VESIPTLITINADTGA 121 (144)
T ss_dssp CCSSSEEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCe
Confidence 99999999998 555
No 168
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.22 E-value=3.2e-11 Score=121.51 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=75.9
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC---------------------------CcHHHHHH
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG---------------------------DQKEYAKQ 422 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~---------------------------~~~~l~~~ 422 (463)
.++++||+||++||++|+.+.|.|.+++++|++.++.|+.|+++. + ..++ +
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~-~~l~-~ 158 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNN-YATW-T 158 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTT-SHHH-H
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCc-HHHH-H
Confidence 578999999999999999999999999999987679999998753 2 4788 8
Q ss_pred cCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 423 KLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.|+|.++|+++++++++.+...+.| ..+.++|.++|+++
T Consensus 159 ~ygV~~~Pt~~lID~~G~Iv~~~~G-~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDATGTVRHIKFG-EGDYNVTETLVRQL 197 (352)
T ss_dssp HTTCCEESEEEEECTTSBEEEEEES-BCCHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 9999999999999655544455555 68899999998865
No 169
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.21 E-value=2.9e-11 Score=109.50 Aligned_cols=87 Identities=20% Similarity=0.303 Sum_probs=69.2
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQLG 427 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------~~~l~~~~~~I~ 427 (463)
.++++||+||++||++|+.+.|.|.+++++ ++.|+.|+++.. +..++ +.|+|.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLG-LDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHH-HHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHH-HHcCCC
Confidence 578999999999999999999999999876 488888886332 15677 789999
Q ss_pred CCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++|++++++..+.+...+.| ..+.++|.++|+++
T Consensus 132 ~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRHKIVG-VVDQKVWREQLAPL 165 (176)
T ss_dssp SSCEEEEECTTCBEEEEEES-CCCHHHHHHHTHHH
T ss_pred CCCeEEEECCCCeEEEEEcC-CCCHHHHHHHHHHH
Confidence 99998888665544455556 67888888877654
No 170
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.21 E-value=3e-11 Score=109.70 Aligned_cols=92 Identities=22% Similarity=0.383 Sum_probs=72.6
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHcCCCC------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLG------------------ 427 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~----~~l~~~~~~I~------------------ 427 (463)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|++|..+ .+++ +++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~ 137 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFL-KEANLTRLGYFNDQKAKVFQDLKA 137 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHH-HHTTCCTTCCEECTTCHHHHHHHT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHH-HHcCCCCCceEECCcchHHHHhcc
Confidence 57899999999999999999999999999998557999999998641 4556 667764
Q ss_pred -----CCCEEEEEeCCCcCeeecCCC-CCCHHHHHHHHHHh
Q 012452 428 -----SFPTILFFPKHSSKPIKYPSE-RRDVDSLMAFVDAL 462 (463)
Q Consensus 428 -----~~PTi~~f~~g~~~~~~y~gg-~~~~~~L~~fI~~l 462 (463)
++|++++++.++++...+.|. ..+.++|.++|+++
T Consensus 138 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 138 IGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp TTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHH
Confidence 899999996555444455552 12478899998875
No 171
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.18 E-value=8.8e-11 Score=105.20 Aligned_cols=68 Identities=18% Similarity=0.347 Sum_probs=60.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCCc-----------------------HHHHHHcCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQ-----------------------KEYAKQKLQ 425 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~~-----------------------~~l~~~~~~ 425 (463)
+++++||+|||+||++|+.+.|.|.+++++|++ .++.|+.|++|... .+++ +.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALT-KKYS 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHH-HHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHH-HHcC
Confidence 578999999999999999999999999999986 57999999988761 4677 8999
Q ss_pred CCCCCEEEEEeCC
Q 012452 426 LGSFPTILFFPKH 438 (463)
Q Consensus 426 I~~~PTi~~f~~g 438 (463)
|.++||++++++.
T Consensus 126 v~~~Pt~~lid~~ 138 (165)
T 3s9f_A 126 VESIPTLIGLNAD 138 (165)
T ss_dssp CCSSSEEEEEETT
T ss_pred CCCCCEEEEEeCC
Confidence 9999999999853
No 172
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.17 E-value=4.7e-11 Score=108.71 Aligned_cols=88 Identities=20% Similarity=0.308 Sum_probs=70.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCcHHHH
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEYA 420 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d-----------------------------~~~~~l~ 420 (463)
.++++||+||++||++|+.+.|.+.++.+++.+. +.|+.|+++ .+ .+++
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDET-QEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSS-SHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCc-chHH
Confidence 5799999999999999999999999999999985 999999984 23 5788
Q ss_pred HHcCCCCCCCEEEEEeCCCcCeeecCCC---------CCCHHHHHHHHHHh
Q 012452 421 KQKLQLGSFPTILFFPKHSSKPIKYPSE---------RRDVDSLMAFVDAL 462 (463)
Q Consensus 421 ~~~~~I~~~PTi~~f~~g~~~~~~y~gg---------~~~~~~L~~fI~~l 462 (463)
+.|+|.++|+++++++.+. .+.. |. ..+.++|.+.|+++
T Consensus 110 -~~~~v~~~P~~~lid~~G~-i~~~-g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 110 -KAYRALRTPEVFLFDERRL-LRYH-GRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp -HHTTCCEESEEEEECTTCB-EEEE-ECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred -HHcCCCCCCeEEEECCCCc-EEEE-EecCCccccccccCHHHHHHHHHHH
Confidence 8999999999999965543 2222 21 23677888888765
No 173
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.17 E-value=1.1e-10 Score=103.71 Aligned_cols=116 Identities=16% Similarity=0.269 Sum_probs=81.9
Q ss_pred cccccccCCCCeeecChhhHHHHHhh-cCCCCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcCCCc-
Q 012452 342 EAVADIFNSQNLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ- 416 (463)
Q Consensus 342 ~~~~~~~~~~~V~~lt~~~f~~~i~~-~~~~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d~~~- 416 (463)
.....+|.....+. ...+|++.+.. ...+|++||+||++||..|+.|.... .++++.++. ++.++++|.+..+
T Consensus 13 ~~l~~lf~~p~~~~-~~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~-~fv~v~~d~~~~~~ 90 (153)
T 2dlx_A 13 TTLADLFRPPIDLM-HKGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE-HFIFWQVYHDSEEG 90 (153)
T ss_dssp CCCCCTTSCCTTTS-CCSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH-TEEEEEEESSSHHH
T ss_pred hHHHHhhCCchhhh-cccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc-CeEEEEEecCCHhH
Confidence 34445554432222 23466666543 23589999999999999999998765 567777755 6999999997631
Q ss_pred HHHHHHcCCCCCCCEEEEEeCC-CcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKH-SSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g-~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
..+. ++|++.++|+++|+... +...... +| .+.+++.++|+++
T Consensus 91 ~~l~-~~y~v~~~P~~~fld~~~G~~l~~~-~g-~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 91 QRYI-QFYKLGDFPYVSILDPRTGQKLVEW-HQ-LDVSSFLDQVTGF 134 (153)
T ss_dssp HHHH-HHHTCCSSSEEEEECTTTCCCCEEE-SS-CCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCCCCEEEEEeCCCCcEeeec-CC-CCHHHHHHHHHHH
Confidence 4677 89999999999999753 3223334 44 8999998888754
No 174
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.77 E-value=3.3e-12 Score=112.97 Aligned_cols=89 Identities=10% Similarity=0.119 Sum_probs=66.6
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHH-HHHHhc-CCCeEEEEEEcCCCcHHHHHHcCC----------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVE-LADKLA-GNGVKVGKFRADGDQKEYAKQKLQ---------------------- 425 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~-la~~~~-~~~v~f~~VD~d~~~~~l~~~~~~---------------------- 425 (463)
.++++||+||++||++|+.+.|.+.+ +.+++. +.++.|+.|+++.+ .+.. ++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~-~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEP-LEKV-LAFAKSTGVTYPLGLDPGADIFAKYA 109 (159)
Confidence 57899999999999999999999998 988887 45799999998876 4433 3333
Q ss_pred --CCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 426 --LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 --I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+.++|++++++..++....+.| .+.+++.++|+++
T Consensus 110 ~~~~~~P~~~lid~~G~i~~~~~g--~~~~~l~~~l~~l 146 (159)
T 2ls5_A 110 LRDAGITRNVLIDREGKIVKLTRL--YNEEEFASLVQQI 146 (159)
Confidence 5779999999544332333333 5666777777765
No 175
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.14 E-value=1.2e-10 Score=109.36 Aligned_cols=89 Identities=19% Similarity=0.367 Sum_probs=71.9
Q ss_pred CCC-cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC-----------------------------CCcHHH
Q 012452 370 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----------------------------GDQKEY 419 (463)
Q Consensus 370 ~~k-~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d-----------------------------~~~~~l 419 (463)
.++ ++||+||++||++|+.+.|.|.+++++|++.++.|+.|+++ .+ .++
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~-~~~ 135 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDAS-QSV 135 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTT-CHH
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCc-cHH
Confidence 456 59999999999999999999999999998867999999994 23 578
Q ss_pred HHHcCCCCCCCEEEEEeCCCcCeeecCC----------CCCCHHHHHHHHHHh
Q 012452 420 AKQKLQLGSFPTILFFPKHSSKPIKYPS----------ERRDVDSLMAFVDAL 462 (463)
Q Consensus 420 ~~~~~~I~~~PTi~~f~~g~~~~~~y~g----------g~~~~~~L~~fI~~l 462 (463)
+ +.|+|.++|++++++..+. +.|.| +..+.++|.+.|+++
T Consensus 136 ~-~~~~v~~~P~~~liD~~G~--i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 136 A-KAYGAACTPDFFLYDRERR--LVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp H-HHHTCCEESEEEEECTTCB--EEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred H-HHcCCCCCCeEEEECCCCc--EEEeccccccccccccccCHHHHHHHHHHH
Confidence 8 8999999999999965553 22322 134578888888765
No 176
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.74 E-value=4.6e-12 Score=109.56 Aligned_cols=69 Identities=12% Similarity=0.292 Sum_probs=58.2
Q ss_pred CCC-cEEEEEecCCChhHHHhHHHHHHHHHHhcC--CCeEEEEEEcCCCc------------------------HHHHHH
Q 012452 370 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAG--NGVKVGKFRADGDQ------------------------KEYAKQ 422 (463)
Q Consensus 370 ~~k-~vlV~FyA~wC~~C~~~~p~l~~la~~~~~--~~v~f~~VD~d~~~------------------------~~l~~~ 422 (463)
.++ ++||+||++||++|+.+.|.+.+++++++. .++.++.|+++... .+++ +
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 102 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVT-A 102 (143)
Confidence 466 999999999999999999999999999942 36888888887541 2678 8
Q ss_pred cCCCCCCCEEEEEe-CCC
Q 012452 423 KLQLGSFPTILFFP-KHS 439 (463)
Q Consensus 423 ~~~I~~~PTi~~f~-~g~ 439 (463)
.|+|.++||+++++ +|+
T Consensus 103 ~~~v~~~P~~~lid~~G~ 120 (143)
T 2lus_A 103 KYGITGIPALVIVKKDGT 120 (143)
Confidence 99999999999997 555
No 177
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.13 E-value=1.5e-10 Score=102.94 Aligned_cols=91 Identities=13% Similarity=0.075 Sum_probs=71.5
Q ss_pred CCCc-EEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC---------------------CCcHHHHHHcCCC
Q 012452 370 RQEP-WLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD---------------------GDQKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~-vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d---------------------~~~~~l~~~~~~I 426 (463)
.++. +||+|| ++||++|+.+.|.|.++.++|++.++.|+.|++| .+ .+++ +.|+|
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~v 104 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPD-KKIR-ELYGA 104 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTT-SHHH-HHTTC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCc-HHHH-HHcCC
Confidence 4666 999999 9999999999999999999998767999999987 33 6788 89999
Q ss_pred CC----CCEEEEEeCCCcCeeecCCC---CCCHHHHHHHHHHh
Q 012452 427 GS----FPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~----~PTi~~f~~g~~~~~~y~gg---~~~~~~L~~fI~~l 462 (463)
.+ +|+++++++.+.+...+.|. ..+.+++.+.|+++
T Consensus 105 ~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 105 KGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp CCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred CCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 99 99999997555434444441 23456666666655
No 178
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.11 E-value=1.7e-10 Score=110.29 Aligned_cols=93 Identities=14% Similarity=0.324 Sum_probs=76.6
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCC--ChhHHHhHHHHHHHHHHh---cCCC--eEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPW--CQFCQAMEGSYVELADKL---AGNG--VKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~w--C~~C~~~~p~l~~la~~~---~~~~--v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
+++.+++. +-+++++|.||++| |++|+.+.+.++++++.+ ++ + +.|+++|++.+ ++++ ++|+|.++||
T Consensus 15 ~ql~~~~~--~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~-~~~v~~~~vd~d~~-~~~~-~~~gv~~~Pt 89 (243)
T 2hls_A 15 RELRETLA--EMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNG-GKLLKLNVYYRESD-SDKF-SEFKVERVPT 89 (243)
T ss_dssp HHHHHHHT--TCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETT-EESEEEEEEETTTT-HHHH-HHTTCCSSSE
T ss_pred HHHHHHHH--hCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCC-CceeEEEEecCCcC-HHHH-HhcCCCcCCE
Confidence 45666554 34689999999999 999999999999999885 22 2 99999999999 9999 9999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHH
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~ 461 (463)
+++| +| ...|.| ..+.+++..|+..
T Consensus 90 ~~i~-~g---~~~~~G-~~~~~~l~~fv~~ 114 (243)
T 2hls_A 90 VAFL-GG---EVRWTG-IPAGEEIRALVEV 114 (243)
T ss_dssp EEET-TT---TEEEES-CCCTTHHHHHHHH
T ss_pred EEEE-CC---ceeEcC-CCcHHHHHHHHHH
Confidence 9999 55 467766 4566778777765
No 179
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=99.11 E-value=1.8e-10 Score=107.78 Aligned_cols=176 Identities=13% Similarity=0.135 Sum_probs=102.7
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCCh-HHH------HHHHHhc
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDA-VEV------QALVRSK 183 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~-~~~------~~~~~~~ 183 (463)
++++|++|||+||+++ +++.+.+.++..+++|+|....+..++++++++++|++++++.... ..+ ...+..
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~~~~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~~~~~~~~~~~l~~~~~~~- 82 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDMSLLNQLAPNALTRNDIEI- 82 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEECGGGGGGSTGGGC-------
T ss_pred CCEEEEccCcHHHHHHHHHHHHcCCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeChHHhhhcccccccccccc-
Confidence 4699999999998766 8888877788899999996555678999999999999988775432 110 000100
Q ss_pred CCCCCCccchhhh--hhchhh-hHHHHHHc--cCceEEEeeeccCCcccccCCC----ceecCCCCcCCcCCCCCeEEEE
Q 012452 184 GLFSFYEDGHQEC--CRVRKV-RPLRRALK--GLRAWITGQRKDQSPGTRSEIP----VVQVDPVFEGLEGGVGSLVKWN 254 (463)
Q Consensus 184 g~~~~~~~~~~~C--c~~~Kv-~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~----~~~~d~~~~~~~~~~~~~~k~~ 254 (463)
+.........| |+..+. .-+.++.+ +.+++++|...+|..+.|...+ .+..-... . ...++..++
T Consensus 83 --~~~~~~~~~~~~~~r~~~~~~~~~~~a~~~g~~~i~tG~~~dd~~~~~~~~~~~~~~l~~~~~~-~---~~~~~~ii~ 156 (219)
T 3bl5_A 83 --EVKDGELPSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNL-A---MEKPFVIHT 156 (219)
T ss_dssp ----------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC----CCGGGSHHHHHHHHHHHHH-H---HTSCCEEEC
T ss_pred --cccccCCCCceeechHHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCHHHHHHHHHHHHh-c---cCCCeEEEe
Confidence 00000011122 333333 23333333 5679999999888531111100 01000000 0 002456789
Q ss_pred eCccCcHHHHHHHHHhCCCC---ccchhcc--CCcccCcccCCcc
Q 012452 255 PVANVKGNDIWNFLRTMDVP---INSLHSQ--GYISIGCEPCTRP 294 (463)
Q Consensus 255 PI~dWt~~DVw~yi~~~~lp---~npLy~~--Gy~siGC~~Ct~~ 294 (463)
||++|+..||+.|.+++++| ++.-+.+ |..+.+|-.|+.-
T Consensus 157 PL~~~~K~ei~~~a~~~glp~~~~~~t~sc~~~~~~~~CG~C~~C 201 (219)
T 3bl5_A 157 PLMWLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECPAC 201 (219)
T ss_dssp TTTTCCHHHHHHHHHHTTCHHHHHHHCCCSTTSCCSSCCSCSHHH
T ss_pred ccccCCHHHHHHHHHHcCCCccchhheeeccCCCCCCCCCCCHHH
Confidence 99999999999999999993 3444443 2223778888653
No 180
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.08 E-value=2.6e-11 Score=118.61 Aligned_cols=81 Identities=17% Similarity=0.314 Sum_probs=62.0
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC------CCcHHHHHHcCCCCCCCEE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------GDQKEYAKQKLQLGSFPTI 432 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d------~~~~~l~~~~~~I~~~PTi 432 (463)
..+.+.+. +..+|+||||||+||++++|.|++++++++ ++|++ ++ ++++ ++|+|+++||+
T Consensus 190 ~~la~~l~-----~~~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------~Vd~d~~d~~~~~-~~la-~~~gI~~vPT~ 255 (291)
T 3kp9_A 190 VGLAAHLR-----QIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQ-AQEC-TEAGITSYPTW 255 (291)
T ss_dssp HHHHHHHH-----HTTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCSSCSSSCC-CHHH-HTTTCCSTTEE
T ss_pred HHHHHHhC-----CCCEEEEECCCCHHHHHHHHHHHHHHHHcC-------EEEEeecCchhhH-HHHH-HHcCCcccCeE
Confidence 34555543 334799999999999999999999986652 34444 24 8999 99999999996
Q ss_pred EEEeCCCcCeeecCCCCCCHHHHHHHHH
Q 012452 433 LFFPKHSSKPIKYPSERRDVDSLMAFVD 460 (463)
Q Consensus 433 ~~f~~g~~~~~~y~gg~~~~~~L~~fI~ 460 (463)
++ +|+ .+.| .++.++|.+|++
T Consensus 256 ~i--~G~----~~~G-~~~~~~L~~~l~ 276 (291)
T 3kp9_A 256 II--NGR----TYTG-VRSLEALAVASG 276 (291)
T ss_dssp EE--TTE----EEES-CCCHHHHHHHTC
T ss_pred EE--CCE----EecC-CCCHHHHHHHHC
Confidence 54 665 2666 799999999874
No 181
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.07 E-value=3e-10 Score=100.93 Aligned_cols=91 Identities=15% Similarity=0.192 Sum_probs=67.4
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC------Cc----HHH-HHHcC--------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG------DQ----KEY-AKQKL-------------- 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~------~~----~~l-~~~~~-------------- 424 (463)
.++++||+||++||++|+.+.|.+.++.++|++.++.|+.|++|. .. .++ . +++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVT-EKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHH-HHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHH-HhcCCCCceEEEEeecC
Confidence 578999999999999999999999999999987679999999863 10 112 1 111
Q ss_pred ---------------C-----CCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 ---------------Q-----LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ---------------~-----I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+ |..+|+++++.+.+.....+.| ..+.++|.+.|+++
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSP-TTAPYDIEGDIMEL 165 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCC-CCCHHHHHHHHHHH
Confidence 3 3445888888655544455665 57778888888765
No 182
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.07 E-value=4.2e-10 Score=102.99 Aligned_cols=92 Identities=16% Similarity=0.240 Sum_probs=69.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHH-H-----------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYA-K----------------- 421 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-------~~---~~l~-~----------------- 421 (463)
.++++||+||++||++|+.+.|.|.++.++|++.++.|+.|++|. .. .+++ +
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 578999999999999999999999999999987679999999873 10 1122 0
Q ss_pred -----------HcCCCCCCC------EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 422 -----------QKLQLGSFP------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 -----------~~~~I~~~P------Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
..|++.++| +++++.+.+.+...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 183 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSP-GASVKDIEKKLIPL 183 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECT-TCCHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECC-CCCHHHHHHHHHHH
Confidence 124778899 77777544443445555 67889999888765
No 183
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.07 E-value=1.2e-10 Score=108.37 Aligned_cols=144 Identities=15% Similarity=0.196 Sum_probs=98.9
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHH---HHhcCCCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQAL---VRSKGLFS 187 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~---~~~~g~~~ 187 (463)
.+++|++|||+||+++ +++.+.+.++.++++|+|... ..++++++++++|++++++..+....... ....+.
T Consensus 7 ~kv~v~~SGG~DS~~ll~ll~~~g~~v~~~~v~~~~~~--~~~~~~~~a~~lgi~~~~~~~~~~~~~~~~~~~~~~~~-- 82 (203)
T 3k32_A 7 MDVHVLFSGGKDSSLSAVILKKLGYNPHLITINFGVIP--SYKLAEETAKILGFKHKVITLDRKIVEKAADMIIEHKY-- 82 (203)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTTEEEEEEEEECSSSC--TTHHHHHHHHHHTCEEEEEECCTHHHHHHHHHHHHHSS--
T ss_pred CeEEEEEECcHHHHHHHHHHHHcCCCeEEEEEeCCCch--HHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCC--
Confidence 3599999999998766 888887778899999999765 56899999999999998876654322111 122222
Q ss_pred CCccchhhhhhchhhhHHHHHHccCceEEEeeeccCCcc--cccCCCceecCCCCcCCcCCCCCeEEEEeCccCcHHHHH
Q 012452 188 FYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPG--TRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIW 265 (463)
Q Consensus 188 ~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~Rr~ES~~--~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw 265 (463)
....|.. .+..-+.+..++.+.++||...|+-.. .|..+..+. .. .+...++||+.|+.+||+
T Consensus 83 ----~~~~c~~-~~~~~l~~~A~g~~~i~tGh~~dD~~et~~~~gl~~~~--~~--------~~~~iirPLl~~~k~eI~ 147 (203)
T 3k32_A 83 ----PGPAIQY-VHKTVLEILADEYSILADGTRRDDRVPKLSYSEIQSLE--MR--------KNIQYITPLMGFGYKTLR 147 (203)
T ss_dssp ----SHHHHHH-HHHHHHHHHTTTCSEEECCCCTTCCSSCCCHHHHHHHH--HH--------HTCEEECGGGGCCHHHHH
T ss_pred ----CccHHHH-HHHHHHHHHhcCCCEEEECCCcccchhhcchhhccCcc--cc--------cCCeEEeccCCCCHHHHH
Confidence 1234544 344566665568889999999998641 111111110 00 134568899999999999
Q ss_pred HHHHhCCCCc
Q 012452 266 NFLRTMDVPI 275 (463)
Q Consensus 266 ~yi~~~~lp~ 275 (463)
.|.+++ +++
T Consensus 148 ~~a~~~-l~~ 156 (203)
T 3k32_A 148 HLASEF-FIL 156 (203)
T ss_dssp HHHHHH-EEE
T ss_pred HHHHHh-CCc
Confidence 999998 544
No 184
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.06 E-value=3.1e-10 Score=100.93 Aligned_cols=91 Identities=14% Similarity=0.221 Sum_probs=69.3
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHH-cC--------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQ-KL-------------- 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-------~~---~~l~~~-~~-------------- 424 (463)
.++++||+||++||++|+.+.|.+.++.+++++.++.|+.|++|. .. .+++ + ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFV-CTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHH-HHhcCCCceeEeeeccCC
Confidence 579999999999999999999999999999987679999999863 21 2334 3 33
Q ss_pred ---------------CC--CCCC---EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 ---------------QL--GSFP---TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ---------------~I--~~~P---Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++ .++| ++++++..+.+...+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYP-TTSPLSLERDIKQL 166 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCC-CCCHHHHHHHHHHH
Confidence 34 5678 78888554443445555 67888898888875
No 185
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.05 E-value=5.2e-10 Score=102.15 Aligned_cols=92 Identities=16% Similarity=0.247 Sum_probs=68.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-------CcHHHHH--H-c----------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQKEYAK--Q-K---------------- 423 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-------~~~~l~~--~-~---------------- 423 (463)
+++++||+||++||++|+.+.|.|.++.++|++.++.|+.|++|. ...++.+ + +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 579999999999999999999999999999988679999998872 1122220 1 1
Q ss_pred ----------------CCCCCCC---EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 424 ----------------LQLGSFP---TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 424 ----------------~~I~~~P---Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++..+| +++++++.+.+...+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g-~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSP-GASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECT-TCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECC-CCCHHHHHHHHHHH
Confidence 1234566 88888655543455555 68899999999875
No 186
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.04 E-value=7.4e-10 Score=98.73 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=71.7
Q ss_pred CCCcEEEEEecCCChh-HHHhHHHHHHHHHHhcC----CCeEEEEEEcCCC--c-------------------------H
Q 012452 370 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG----NGVKVGKFRADGD--Q-------------------------K 417 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~-C~~~~p~l~~la~~~~~----~~v~f~~VD~d~~--~-------------------------~ 417 (463)
.++++||+||++||++ |+.+.|.+.++.++++. .++.|+.|++|.+ + .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999952 3799999998842 0 1
Q ss_pred HHHHHcCCCCCCC---------------EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 418 EYAKQKLQLGSFP---------------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 418 ~l~~~~~~I~~~P---------------Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++ +.|+|..+| +++++++.+.+...+.| ..+.++|.+.|+++
T Consensus 105 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 162 (171)
T 2rli_A 105 QAS-HSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGR-SRSAEQISDSVRRH 162 (171)
T ss_dssp HHH-HHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEES-SCCHHHHHHHHHHH
T ss_pred HHH-HHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECC-CCCHHHHHHHHHHH
Confidence 477 789998888 77777554443444555 68899998888765
No 187
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=99.03 E-value=3e-10 Score=116.09 Aligned_cols=148 Identities=17% Similarity=0.251 Sum_probs=95.1
Q ss_pred cEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHH-----HHHHhcC
Q 012452 113 DIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQ-----ALVRSKG 184 (463)
Q Consensus 113 ~i~vafSGGKDS~vl-~L~~~~-~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl-~i~~~~p~~~~~~-----~~~~~~g 184 (463)
+++|++|||+||+++ +++.+. +.++..+++|+|. ++.+++++++++++|+ +++++.... .+. ..+....
T Consensus 2 kVvva~SGG~DSsvll~ll~~~~g~~V~av~vd~g~--~~e~e~a~~~A~~lGi~~~~vvd~~~-ef~~~~~~~~i~~~~ 78 (400)
T 1kor_A 2 KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQ--GEEVEEAREKALRTGASKAIALDLKE-EFVRDFVFPMMRAGA 78 (400)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSC--SSCHHHHHHHHHHHTCSEEEEEECHH-HHHHHTHHHHHHTTC
T ss_pred cEEEEEeChHHHHHHHHHHHHhhCCcEEEEEEeCCC--HHHHHHHHHHHHHhCCCeEEEEeCcH-HHHHHhhHHHHHcCC
Confidence 589999999998765 888776 8889999999997 6779999999999999 677764332 121 1222221
Q ss_pred CCC-CCc---cchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEEEeCcc
Q 012452 185 LFS-FYE---DGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVAN 258 (463)
Q Consensus 185 ~~~-~~~---~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~d 258 (463)
.+. -+. ...+.|.. ..+.++.+ +.+++++|.+.+.....|......... +.+-.+.||.+
T Consensus 79 ~~e~~y~~g~~~~R~~~~----~~L~~~A~~~G~~~IatG~~~d~nDq~~f~~g~~~l~----------p~l~ii~PL~~ 144 (400)
T 1kor_A 79 VYEGYYLLGTSIARPLIA----KHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALK----------PDIKVIAPWRE 144 (400)
T ss_dssp CBTTTBCCTTTTHHHHHH----HHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGGT
T ss_pred ccccccccCCccchHHHH----HHHHHHHHHcCCCEEEECCCCCcccHHHHHHHHHhcC----------CCCEEEEeecc
Confidence 100 011 11223332 33444444 667999999985110122211111111 13445999999
Q ss_pred C---cHHHHHHHHHhCCCCccc
Q 012452 259 V---KGNDIWNFLRTMDVPINS 277 (463)
Q Consensus 259 W---t~~DVw~yi~~~~lp~np 277 (463)
| +.+|||.|++++|||+..
T Consensus 145 ~~~~tK~eI~~ya~~~gip~~~ 166 (400)
T 1kor_A 145 WSFQGRKEMIAYAEAHGIPVPV 166 (400)
T ss_dssp CCCCSHHHHHHHHHHTTCCCC-
T ss_pred cccCCHHHHHHHHHHcCCCccc
Confidence 9 999999999999999974
No 188
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.03 E-value=6.7e-10 Score=98.16 Aligned_cols=91 Identities=9% Similarity=0.104 Sum_probs=71.8
Q ss_pred CCCcEEEEEecCCChh-HHHhHHHHHHHHHHhcC----CCeEEEEEEcCCCc---------------------------H
Q 012452 370 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG----NGVKVGKFRADGDQ---------------------------K 417 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~-C~~~~p~l~~la~~~~~----~~v~f~~VD~d~~~---------------------------~ 417 (463)
.++++||+||++||++ |+.+.|.+.++.+++++ .++.|+.|++|... .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999999864 37999999987530 1
Q ss_pred HHHHHcCCCCCCC---------------EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 418 EYAKQKLQLGSFP---------------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 418 ~l~~~~~~I~~~P---------------Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.++ +.|+|..+| +++++...+.....+.| ..+.++|.+.|+++
T Consensus 102 ~~~-~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVA-RAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQ-NKRKGEIAASIATH 159 (164)
T ss_dssp HHH-HTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEET-TCCHHHHHHHHHHH
T ss_pred HHH-HhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence 377 789999999 77777554443444544 68889888888765
No 189
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.02 E-value=4e-10 Score=101.07 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=67.1
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHH-H-----------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYA-K----------------- 421 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-------~~---~~l~-~----------------- 421 (463)
.++++||+|||+||++|+ +.|.|.++.+++++.++.|+.|++|. .. .+++ +
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 578999999999999999 99999999999987679999998741 10 1111 0
Q ss_pred -----------HcCCCCCCC------EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 422 -----------QKLQLGSFP------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 -----------~~~~I~~~P------Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+.|++.++| +++++++.+.+...+.| ..+.++|.+.|+++
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSS-LTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECT-TSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCC-CCCHHHHHHHHHHH
Confidence 246788999 77777544443455555 67888888888765
No 190
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.02 E-value=6.6e-10 Score=98.14 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=72.0
Q ss_pred CCC-cEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------CcHHHHHHcC
Q 012452 370 RQE-PWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----------------------DQKEYAKQKL 424 (463)
Q Consensus 370 ~~k-~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-----------------------~~~~l~~~~~ 424 (463)
.++ ++||+|| ++||++|+.+.|.+.++++++++.++.|+.|++|. + ..++ +.|
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~-~~~ 111 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPH-GAVS-QAY 111 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTT-THHH-HHT
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcC-hHHH-HHc
Confidence 355 8999998 99999999999999999999986679999999874 4 6788 899
Q ss_pred CCC----CCC--EEEEEeCCCcCeeecCCC---CCCHHHHHHHHHHhC
Q 012452 425 QLG----SFP--TILFFPKHSSKPIKYPSE---RRDVDSLMAFVDALR 463 (463)
Q Consensus 425 ~I~----~~P--Ti~~f~~g~~~~~~y~gg---~~~~~~L~~fI~~l~ 463 (463)
++. ++| +++++++.+.+...+.|. ..+.+++.+.|++++
T Consensus 112 ~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 112 GVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAALT 159 (160)
T ss_dssp TCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHHTC
T ss_pred CCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 998 999 777775544433344442 236788888888764
No 191
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.00 E-value=2.3e-10 Score=103.87 Aligned_cols=91 Identities=16% Similarity=0.163 Sum_probs=68.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHHc-C--------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQK-L-------------- 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-------~~---~~l~~~~-~-------------- 424 (463)
+++++||+||++||++|+.+.|.|.+++++|++.++.|+.|++|. .. .+++ ++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFA-RRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHH-HhhcCCCceeEeecccCC
Confidence 578999999999999999999999999999987679999999874 20 2233 22 1
Q ss_pred ---------CCCCCC-------EEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 ---------QLGSFP-------TILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ---------~I~~~P-------Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+..+| +++++.+.+.+...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 179 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDP-TVSVEEVRPQITAL 179 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECT-TSCHHHHHHHHHTT
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCC-CCCHHHHHHHHHHH
Confidence 244578 66667544443445665 68899999999875
No 192
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.00 E-value=1.3e-09 Score=115.48 Aligned_cols=96 Identities=11% Similarity=0.121 Sum_probs=79.7
Q ss_pred eecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012452 354 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 433 (463)
Q Consensus 354 ~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~ 433 (463)
..++++.++.+.. ..++..++.||++||++|+.+.|.+++++..+. ++.+.++|.+.+ ++++ ++|+|.++||++
T Consensus 102 ~~~~~~~~~~i~~--~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~~-~~~~-~~~~i~svPt~~ 175 (521)
T 1hyu_A 102 SKEAQSLLEQIRD--IDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGTF-QNEI-TERNVMGVPAVF 175 (521)
T ss_dssp CCSCHHHHHHHHH--CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTTC-HHHH-HHTTCCSSSEEE
T ss_pred CCCCHHHHHHHHh--cCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechhh-HHHH-HHhCCCccCEEE
Confidence 4567777777653 245678999999999999999999999999876 499999999999 9999 999999999997
Q ss_pred EEeCCCcCeeecCCCCCCHHHHHHHHHH
Q 012452 434 FFPKHSSKPIKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 434 ~f~~g~~~~~~y~gg~~~~~~L~~fI~~ 461 (463)
+ +|+ .+.. | ..+.++|.+++++
T Consensus 176 i--~g~--~~~~-G-~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 176 V--NGK--EFGQ-G-RMTLTEIVAKVDT 197 (521)
T ss_dssp E--TTE--EEEE-S-CCCHHHHHHHHCC
T ss_pred E--CCE--EEec-C-CCCHHHHHHHHhh
Confidence 7 666 3433 4 7899999999764
No 193
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.99 E-value=6.2e-10 Score=101.05 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=68.2
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-------Cc---HHHHHHcC---------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-------DQ---KEYAKQKL--------------- 424 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-------~~---~~l~~~~~--------------- 424 (463)
.++++||+||++||++|+.+.|.|.++.++|++.++.|+.|++|. .. .+++ +++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHH-HTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHH-HHcCCCceEEeeeccCCc
Confidence 578999999999999999999999999999987679999999863 10 1222 222
Q ss_pred ----------------C-----CCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 425 ----------------Q-----LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ----------------~-----I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+ |..+|+++++++.+.+...+.| ..+.++|.+.|+++
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECT-TSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCC-CCCHHHHHHHHHHh
Confidence 2 3335999888655544455666 67888898888765
No 194
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.99 E-value=7.2e-10 Score=91.07 Aligned_cols=79 Identities=11% Similarity=0.185 Sum_probs=64.1
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPS 447 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d--~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~g 447 (463)
.+.+.|++|+++||++|+.+.+.|++++ . ++.|..+|++ .+ +++. ++|+ .++|++ |.+|+ .+. .+
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~----~-~i~~~~vdi~~~~~-~el~-~~~g-~~vP~l--~~~g~--~~~-~~ 80 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYK----D-RFILQEVDITLPEN-STWY-ERYK-FDIPVF--HLNGQ--FLM-MH 80 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTS----S-SSEEEEEETTSSTT-HHHH-HHSS-SSCSEE--EESSS--EEE-ES
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhh----h-CCeEEEEECCCcch-HHHH-HHHC-CCCCEE--EECCE--EEE-ec
Confidence 4567899999999999999999998764 2 4899999998 67 8899 8999 999986 45676 333 33
Q ss_pred CCCCHHHHHHHHHHh
Q 012452 448 ERRDVDSLMAFVDAL 462 (463)
Q Consensus 448 g~~~~~~L~~fI~~l 462 (463)
..+.+.|.++|+++
T Consensus 81 -g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 81 -RVNTSKLEKQLRKL 94 (100)
T ss_dssp -SCCHHHHHHHHHSS
T ss_pred -CCCHHHHHHHHHHH
Confidence 37899999999864
No 195
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.98 E-value=9.1e-10 Score=101.14 Aligned_cols=92 Identities=14% Similarity=0.254 Sum_probs=73.9
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHcC
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~------------------------~~~l~~~~~ 424 (463)
.++++||+|| ++||++|+.+.|.+.++.++|++.++.|+.|++|.. +.+++ +.|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELS-QAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHH-HHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHH-HHh
Confidence 4789999999 999999999999999999999876799999998741 14677 789
Q ss_pred CCC-----CCCEEEEEeCCCcCeeecCCC---CCCHHHHHHHHHHh
Q 012452 425 QLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~-----~~PTi~~f~~g~~~~~~y~gg---~~~~~~L~~fI~~l 462 (463)
+|. .+|+++++++.+.+...+.|. ..+.++|.+.|+++
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 999 999999997555433334331 24789999999876
No 196
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=98.97 E-value=2.3e-09 Score=110.97 Aligned_cols=156 Identities=16% Similarity=0.183 Sum_probs=104.8
Q ss_pred HHHHHHcCCcEEEEechhHHHHHH-HHHHH-----cCCCeEEEEEeCCCC--cHHHHHHHHHHHHHhCCcEEEEcCChHH
Q 012452 104 DRALEKFGNDIAIAFSGAEDVALI-EYAHL-----TGRPFRVFSLDTGRL--NPETYRFFDEVEKHFGIRIEYMFPDAVE 175 (463)
Q Consensus 104 ~~~~~~~~~~i~vafSGGKDS~vl-~L~~~-----~~~~i~vi~~DTg~~--fpeT~~~~~~~~~~~gl~i~~~~p~~~~ 175 (463)
...+.. +++++|++|||+||++| +++.+ .+.++.++|+|.|.. ..+-.++++++++++|++++++.-+..
T Consensus 7 ~~~l~~-~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~~~~~- 84 (433)
T 1ni5_A 7 NRQLLT-SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLA- 84 (433)
T ss_dssp HHHHTT-CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCCC-
T ss_pred HHhcCC-CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEecCC-
Confidence 334433 45699999999999766 77776 345688999999964 346788999999999999988754321
Q ss_pred HHHHHHhcCCCCCCccchhhhhhchhhhHHHHHHccCceEEEeeeccCCccc------ccC-CCceecCCCCcCCcCCCC
Q 012452 176 VQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGT------RSE-IPVVQVDPVFEGLEGGVG 248 (463)
Q Consensus 176 ~~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~~~~~~itG~Rr~ES~~~------Ra~-~~~~~~d~~~~~~~~~~~ 248 (463)
..| .+....|...+-.-+.+..++.+.+++|...++...+ |.. ..-+..-+... ..+
T Consensus 85 ------~~~------~~~e~~aR~~Ry~~l~~~a~~~~~i~tgH~~dD~aEt~L~~l~RG~g~~gL~gm~~~~----~~~ 148 (433)
T 1ni5_A 85 ------QEG------LGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVS----EFA 148 (433)
T ss_dssp ------CSS------STTTTHHHHHHHHHHHHTCCTTEEEECCCCHHHHHHHHHHHHTTTCCTTGGGCCCSEE----EET
T ss_pred ------CCC------CCHHHHHHHHHHHHHHHHHhhCCeEEeeccchHHHHHHHHHHHcCCCcccccCCCCcc----ccC
Confidence 111 1233456666666666666677799999988874311 211 00000000000 002
Q ss_pred CeEEEEeCccCcHHHHHHHHHhCCCCccc
Q 012452 249 SLVKWNPVANVKGNDIWNFLRTMDVPINS 277 (463)
Q Consensus 249 ~~~k~~PI~dWt~~DVw~yi~~~~lp~np 277 (463)
+...++||++|+.+||..|.+.+++|+..
T Consensus 149 ~~~iiRPLl~~~k~eI~~y~~~~gl~~~~ 177 (433)
T 1ni5_A 149 GTRLIRPLLARTRGELVQWARQYDLRWIE 177 (433)
T ss_dssp TEEEECGGGSCCHHHHHHHHHHTTCCCBC
T ss_pred CceEEccCccCCHHHHHHHHHHcCCCeEE
Confidence 35678999999999999999999999843
No 197
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=98.97 E-value=4e-09 Score=110.15 Aligned_cols=152 Identities=18% Similarity=0.124 Sum_probs=103.6
Q ss_pred CcEEEEechhHHHHHH-HHHHH----cCCCeEEEEEeCCCC---cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhc
Q 012452 112 NDIAIAFSGAEDVALI-EYAHL----TGRPFRVFSLDTGRL---NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSK 183 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~----~~~~i~vi~~DTg~~---fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~ 183 (463)
++++|++|||+||++| +++.+ .+.++.++|+|.|.. -.+..++++++++++|++++++.-+... +....
T Consensus 19 ~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~~~~~~---~~~~~ 95 (464)
T 3a2k_A 19 AAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPA---FQRSA 95 (464)
T ss_dssp SBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEECCCHH---HHTTT
T ss_pred CEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEEechhh---hhhcc
Confidence 5799999999999766 77766 466789999999975 2467899999999999999887655432 11122
Q ss_pred CCCCCCccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCccc------ccCCC-cee-cCCCCcCCcCCCCCeEEE
Q 012452 184 GLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGT------RSEIP-VVQ-VDPVFEGLEGGVGSLVKW 253 (463)
Q Consensus 184 g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~------Ra~~~-~~~-~d~~~~~~~~~~~~~~k~ 253 (463)
+. +....|+..+-.-+.++.+ +.+.++||...++...+ |..-. -+. ..+.. ..++...+
T Consensus 96 ~~------~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~dD~aEt~L~~l~rG~g~~gL~gm~~~~-----~~~~~~ii 164 (464)
T 3a2k_A 96 GL------GAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQVETILMRLVRGSTSKGYAGIPVKR-----PFHGGYLI 164 (464)
T ss_dssp TC------CSHHHHHHHHHHHHHHHHHTTTCCEEECCCCHHHHHHHHHHHHHHCCCSSSTTCSCSEE-----ECSSSEEE
T ss_pred CC------CHHHHHHHHHHHHHHHHHHHcCcCEEEEeCChHHHHHHHHHHHHcCCCcccccCCCccc-----cCCCCEEE
Confidence 21 2344566666667777666 45689999988874311 21110 000 00000 00123568
Q ss_pred EeCccCcHHHHHHHHHhCCCCccc
Q 012452 254 NPVANVKGNDIWNFLRTMDVPINS 277 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~~lp~np 277 (463)
+||++|+.+||..|.+.+++|+..
T Consensus 165 RPLl~~~k~eI~~ya~~~gl~~~~ 188 (464)
T 3a2k_A 165 RPFLAVSRAEIEAYCRQMGLSPRC 188 (464)
T ss_dssp CGGGGSCHHHHHHHHHHTCCSSCS
T ss_pred CCCccCcHHHHHHHHHHcCCCeEE
Confidence 999999999999999999999854
No 198
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.96 E-value=5.6e-10 Score=99.47 Aligned_cols=90 Identities=19% Similarity=0.215 Sum_probs=70.6
Q ss_pred CCCcEEEEEecCCChh-HHHhHHHHHHHHHHhcCC---CeEEEEEEcCCC--c-------------------------HH
Q 012452 370 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAGN---GVKVGKFRADGD--Q-------------------------KE 418 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~-C~~~~p~l~~la~~~~~~---~v~f~~VD~d~~--~-------------------------~~ 418 (463)
.++++||+||++||++ |+.+.|.+.++.+++++. ++.|+.|++|.+ + ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5789999999999997 999999999999998742 699999998843 1 13
Q ss_pred HHHHcCC---------------CCCCCEEEEEeCCCcCeeecCCCCC--CHHHHHHHHHHh
Q 012452 419 YAKQKLQ---------------LGSFPTILFFPKHSSKPIKYPSERR--DVDSLMAFVDAL 462 (463)
Q Consensus 419 l~~~~~~---------------I~~~PTi~~f~~g~~~~~~y~gg~~--~~~~L~~fI~~l 462 (463)
++ +.|+ |.++|++++++ .+.+...+.| .. +.++|.+.|+++
T Consensus 114 ~~-~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g-~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AA-QTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSP-DKAEATDRVVADLQAL 171 (172)
T ss_dssp HH-HHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECH-HHHTCHHHHHHHHHHC
T ss_pred HH-HhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECC-CCCCCHHHHHHHHHHh
Confidence 44 4444 46889999999 5443455555 56 889999999876
No 199
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.96 E-value=1.9e-09 Score=97.64 Aligned_cols=45 Identities=22% Similarity=0.172 Sum_probs=41.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 414 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~ 414 (463)
+++++||+||++||++|+.+.|.+.++.++|++.++.|+.|+++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 578999999999999999999999999999988679999998864
No 200
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.96 E-value=7.7e-10 Score=100.79 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=73.2
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHcC
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~------------------------~~~l~~~~~ 424 (463)
.++++||+|| ++||++|+.+.|.|.+++++|++.++.|+.|++|.. +.+++ +.|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTIS-RQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHH-HHh
Confidence 4689999999 999999999999999999999865699999998741 15678 889
Q ss_pred CCC------CCCEEEEEeCCCcCeeecCCC---CCCHHHHHHHHHHh
Q 012452 425 QLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~------~~PTi~~f~~g~~~~~~y~gg---~~~~~~L~~fI~~l 462 (463)
++. ++|++++++..+.+...+.|. ..+.++|.+.|+++
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 998 999999996554433334332 23788898888875
No 201
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.96 E-value=1.2e-10 Score=91.32 Aligned_cols=61 Identities=18% Similarity=0.285 Sum_probs=48.0
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC-CCcHHHHHHcCCCCCCCEEEEEeCCC
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-GDQKEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d-~~~~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
-+++||++||++|+.+.+.++++++++.. .+.++.||.+ .+ .+++ ++|++.++||+++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~~~-~~~~-~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY-TVEIVHLGTDKAR-IAEA-EKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE-EEEEEETTTCSST-HHHH-HHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC-eEEEEEecCChhh-HHHH-HHcCCCcCCEEEE--CCE
Confidence 37789999999999999999998766533 3555555554 34 7888 8999999999977 665
No 202
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.96 E-value=6.3e-10 Score=102.37 Aligned_cols=92 Identities=13% Similarity=0.239 Sum_probs=73.6
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| ++||++|+.+.|.+.++.++|.+.++.|+.|++|.. +.+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~- 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS- 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH-
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH-
Confidence 4789999999 999999999999999999999765799999998741 15788
Q ss_pred HcCCCC-----CCCEEEEEeCCCcCeeecCCC---CCCHHHHHHHHHHh
Q 012452 422 QKLQLG-----SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~-----~~PTi~~f~~g~~~~~~y~gg---~~~~~~L~~fI~~l 462 (463)
+.|+|. ++|+++++++++.+...+.|. ..+.++|.+.|+++
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 899999 999999997555433334331 13688999988876
No 203
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.93 E-value=2.1e-09 Score=100.24 Aligned_cols=44 Identities=20% Similarity=0.117 Sum_probs=41.1
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 413 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d 413 (463)
+++++||+|||+||++|+.+.|.|+++.++|++.++.|+.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 57899999999999999999999999999998767999999986
No 204
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.92 E-value=2.5e-09 Score=98.33 Aligned_cols=92 Identities=11% Similarity=0.178 Sum_probs=73.3
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| ++||++|+.+.|.|.+++++|++.++.|+.|++|.. +.+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS- 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH-
Confidence 4689999999 999999999999999999999876799999998741 14678
Q ss_pred HcCCCC------CCCEEEEEeCCCcCeeecCCC---CCCHHHHHHHHHHh
Q 012452 422 QKLQLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~------~~PTi~~f~~g~~~~~~y~gg---~~~~~~L~~fI~~l 462 (463)
+.|++. .+|+++++++.+.+...+.|. .++.+++.+.|+++
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 889998 799999996555433332221 35789999998876
No 205
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=98.92 E-value=5.8e-09 Score=98.73 Aligned_cols=181 Identities=13% Similarity=0.112 Sum_probs=104.4
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCc-EEEEcCCh-HHHH-HHHHhcC--C
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDA-VEVQ-ALVRSKG--L 185 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~-i~~~~p~~-~~~~-~~~~~~g--~ 185 (463)
++++|++|||+||+++ +++.+...++..+++|.|....+-.++++++++++|++ ++++.-+. ..+. ..+.... .
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~~~~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~~~~l~~~~~~~l~~~~~~v 82 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDSIPV 82 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEECTHHHHTSHHHHHHTTCCC
T ss_pred CCEEEEecCcHHHHHHHHHHHHcCCCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEeChhHHHHhhhhcccccccc
Confidence 3689999999998766 78877777788999999976667789999999999998 87775441 2111 1111111 1
Q ss_pred CC--CCcc-chhhhhhchhh--hHH-HHHHc--cCceEEEeeeccCCcccccCCCce--ecCCCCcCCcCCCCCeEEEEe
Q 012452 186 FS--FYED-GHQECCRVRKV--RPL-RRALK--GLRAWITGQRKDQSPGTRSEIPVV--QVDPVFEGLEGGVGSLVKWNP 255 (463)
Q Consensus 186 ~~--~~~~-~~~~Cc~~~Kv--~Pl-~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~--~~d~~~~~~~~~~~~~~k~~P 255 (463)
+. .... ....|...++. .-+ ..+.. +.+.+++|...+|..+-+...+.+ ..+.... .+...+...++|
T Consensus 83 ~~~~~~~~~~~~~~~~~R~~~~~~la~~~A~~~g~~~I~~G~~~~D~~~~~~~r~~~~~~~~~~~~--~~~~~~~~i~~P 160 (232)
T 2pg3_A 83 PDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIV--LGIARDIRFETP 160 (232)
T ss_dssp CC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHH--HHHTSCCEEECT
T ss_pred cccccccCCCCCCeEechHHHHHHHHHHHHHHcCcCEEEEccCccccCCCCCCCHHHHHHHHHHHH--HhCCCCeEEEEe
Confidence 10 0011 11223222222 111 22222 667899999988753111110000 0000000 000023556899
Q ss_pred CccCcHHHHHHHHHhCCC-Cc--cchhccCC--cccCcccCCcc
Q 012452 256 VANVKGNDIWNFLRTMDV-PI--NSLHSQGY--ISIGCEPCTRP 294 (463)
Q Consensus 256 I~dWt~~DVw~yi~~~~l-p~--npLy~~Gy--~siGC~~Ct~~ 294 (463)
|.+|+..||+.|.+++++ |+ ..-+.+.- ...+|-.|+..
T Consensus 161 L~~~~K~ei~~~a~~~gl~~~~~~~t~sC~~~~~~~~CG~C~~C 204 (232)
T 2pg3_A 161 LMWLNKAETWALADYYQQLDTVRYHTLTCYNGIKGDGCGQCAAC 204 (232)
T ss_dssp TTTCCHHHHHHHHHHTTCHHHHHHHCCCCTTSCCTTTTSCSHHH
T ss_pred cCCCCHHHHHHHHHHcCCCcccccccCCCcCCCCCCcCCcCHhH
Confidence 999999999999999999 64 33333311 12677777654
No 206
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.91 E-value=2.7e-09 Score=83.96 Aligned_cols=74 Identities=16% Similarity=0.300 Sum_probs=58.9
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcCC--CCCCCEEEEEeCCCcCeeecCCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQ--LGSFPTILFFPKHSSKPIKYPSER 449 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~---~~l~~~~~~--I~~~PTi~~f~~g~~~~~~y~gg~ 449 (463)
++.|+++||++|+.+.+.|++++.++.+ +.+..+|++.+. .++. ++++ +.++|++ |.+|+ .+. |
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~--i~~~~vdi~~~~~~~~~l~-~~~~~~~~~vP~i--~~~g~--~i~--~-- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD--FQYQYVDIRAEGITKEDLQ-QKAGKPVETVPQI--FVDQQ--HIG--G-- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS--CEEEEECHHHHTCCSHHHH-HHTCCCSCCSCEE--EETTE--EEE--S--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC--ceEEEEecccChHHHHHHH-HHhCCCCceeCeE--EECCE--EEE--C--
Confidence 6789999999999999999999988765 999999997651 3788 8898 9999998 34665 332 2
Q ss_pred CCHHHHHHHHHH
Q 012452 450 RDVDSLMAFVDA 461 (463)
Q Consensus 450 ~~~~~L~~fI~~ 461 (463)
.++|.+++++
T Consensus 72 --~~~l~~~~~~ 81 (85)
T 1ego_A 72 --YTDFAAWVKE 81 (85)
T ss_dssp --SHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 2678888765
No 207
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.89 E-value=7.5e-10 Score=92.59 Aligned_cols=89 Identities=16% Similarity=0.279 Sum_probs=58.4
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHcCCCCCCCEEEE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLGSFPTILF 434 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~----~~l~~~~~~I~~~PTi~~ 434 (463)
+.+++++. ++++++ ||++||++|+.+.|.|+++.. .+.++.||.+.+. .+++ ++|++.++||+
T Consensus 11 ~~~~~~~~----~~~vv~-f~a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~~~~~~~~~~l~-~~~~v~~~Pt~-- 77 (116)
T 2e7p_A 11 KKAKELAS----SAPVVV-FSKTYCGYCNRVKQLLTQVGA-----SYKVVELDELSDGSQLQSALA-HWTGRGTVPNV-- 77 (116)
T ss_dssp HHHHHHHT----SSSEEE-EECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGSTTHHHHHHHHH-HHHSCCSSCEE--
T ss_pred HHHHHHHc----CCCEEE-EECCCChhHHHHHHHHHHcCC-----CeEEEEccCCCChHHHHHHHH-HHhCCCCcCEE--
Confidence 34455443 456666 999999999999999988742 3455555555431 3578 89999999999
Q ss_pred EeCCCcCeeecCCCCC---CHHHHHHHHHHh
Q 012452 435 FPKHSSKPIKYPSERR---DVDSLMAFVDAL 462 (463)
Q Consensus 435 f~~g~~~~~~y~gg~~---~~~~L~~fI~~l 462 (463)
|.+|+. ...+.+ .. +.+.|.++|+++
T Consensus 78 ~~~g~~-v~~~~~-~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 78 FIGGKQ-IGGCDT-VVEKHQRNELLPLLQDA 106 (116)
T ss_dssp EETTEE-EECHHH-HHHHHHTTCHHHHHHHT
T ss_pred EECCEE-ECChHH-HHHHHhCChHHHHHHHc
Confidence 456662 222222 22 445677887754
No 208
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.89 E-value=2e-09 Score=98.04 Aligned_cols=91 Identities=15% Similarity=0.106 Sum_probs=67.9
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC----C--c----HHHHHHcCCC-------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----D--Q----KEYAKQKLQL------------- 426 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~----~--~----~~l~~~~~~I------------- 426 (463)
+++++||+||++||++|+...|.+.++.+++++.++.|+.|++|. . + .+++ +++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHH-HHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHH-HHcCCCCeeeeeeccCCh
Confidence 578999999999999999999999999999987679999999863 1 0 2233 33322
Q ss_pred -----------------------CCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 427 -----------------------GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 -----------------------~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
..+|+++++++.+.+...+.| ..+.++|.+.|+++
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g-~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGP-MEEPLVIEKDLPHY 184 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECT-TSCGGGGGGGHHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCC-CCCHHHHHHHHHHh
Confidence 225888888655544455665 67788888888765
No 209
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.85 E-value=6.2e-09 Score=96.13 Aligned_cols=92 Identities=13% Similarity=0.216 Sum_probs=73.1
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| ++||++|+.+.|.|.+++++|++.++.|+.|++|.. +.+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~- 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM- 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH-
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH-
Confidence 4689999999 999999999999999999999876799999998741 14677
Q ss_pred HcCCCC------CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 422 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~------~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
+.|++. .+|+++++++.+.+...+.| ..++.++|.+.|+++
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 789998 99999999655543333222 135789999988876
No 210
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=98.85 E-value=1.1e-08 Score=103.71 Aligned_cols=159 Identities=11% Similarity=0.069 Sum_probs=104.7
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCC--------cHHHHHHHHHHHHHhCCcEEEEcCChHHHHH----
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRL--------NPETYRFFDEVEKHFGIRIEYMFPDAVEVQA---- 178 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~--------fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~---- 178 (463)
.+++|++|||+||+++ +|+.+.+.++..+|+|++.. .++..+.++++++++|++++++..... +++
T Consensus 10 ~kVlVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~~~~-~~~~v~~ 88 (376)
T 2hma_A 10 TRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNFEKE-YWDRVFE 88 (376)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEECHHH-HHHHTHH
T ss_pred CeEEEEEeCHHHHHHHHHHHHHcCCcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEeChHH-HHHHHHH
Confidence 5799999999998766 88888888899999999854 357789999999999999988764422 221
Q ss_pred -HHHh--cCCCCCCccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCcccccCCCce-e-cCCC----CcCCcCCC
Q 012452 179 -LVRS--KGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVV-Q-VDPV----FEGLEGGV 247 (463)
Q Consensus 179 -~~~~--~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~-~-~d~~----~~~~~~~~ 247 (463)
++.. .|.. + .....|....|...+.+... +.+.++||...++.. .+.....+ . .++. +.-..-..
T Consensus 89 ~~l~~y~~G~t--p-npc~~C~r~ik~~~l~~~A~~~G~d~IatGH~a~d~~-~~~~~~~l~rg~d~~kdqsyfL~~l~~ 164 (376)
T 2hma_A 89 YFLAEYRAGRT--P-NPDVMCNKEIKFKAFLDYAITLGADYVATGHYARVAR-DEDGTVHMLRGVDNGKDQTYFLSQLSQ 164 (376)
T ss_dssp HHHHHHHTTCC--C-CHHHHHHHHTTTTHHHHHHHTTTCSEEECCCSEEEEE-CSSSCEEEEECSSTTTCCGGGGTTCCH
T ss_pred HHHHHHhcCCC--C-ChHHHHHHHHHHHHHHHHHHhCCCCEEEECcchhhhh-CCCchhhhhhccccccccchhccCCCh
Confidence 1222 2221 1 12235666778888887776 456899999777631 01111101 1 1110 00000000
Q ss_pred -CCeEEEEeCccCcHHHHHHHHHhCCCCc
Q 012452 248 -GSLVKWNPVANVKGNDIWNFLRTMDVPI 275 (463)
Q Consensus 248 -~~~~k~~PI~dWt~~DVw~yi~~~~lp~ 275 (463)
.....+.||.+++..||..|.+++++|+
T Consensus 165 ~~l~~~i~PL~~~~K~eVr~~A~~~gl~~ 193 (376)
T 2hma_A 165 EQLQKTMFPLGHLEKPEVRRLAEEAGLST 193 (376)
T ss_dssp HHHTTEECTTTTCCHHHHHHHHHHTTCTT
T ss_pred hhcCcEEecCcCCCHHHHHHHHHHcCCCc
Confidence 0134689999999999999999999985
No 211
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.83 E-value=1.4e-08 Score=89.91 Aligned_cols=92 Identities=9% Similarity=0.081 Sum_probs=71.0
Q ss_pred CCCcEEEEEec-CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHcCCCCC
Q 012452 370 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGS 428 (463)
Q Consensus 370 ~~k~vlV~FyA-~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--------------------~~~l~~~~~~I~~ 428 (463)
.++++||+||+ +||++|....|.+.++.++|++.++.++.|.+|.. +.++. +.|++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~v~~ 112 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALC-RAFDVIK 112 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHH-HHTTCEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHH-HHhCCcc
Confidence 46799999998 99999999999999999999876799999988732 14567 7888877
Q ss_pred ------------CCEEEEEeCCCcCeeecCCC--CCCHHHHHHHHHHh
Q 012452 429 ------------FPTILFFPKHSSKPIKYPSE--RRDVDSLMAFVDAL 462 (463)
Q Consensus 429 ------------~PTi~~f~~g~~~~~~y~gg--~~~~~~L~~fI~~l 462 (463)
+|+++++++.+.+...+.+. ....+++.+.|+++
T Consensus 113 ~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 113 EKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 99999997655443344331 24467788888776
No 212
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.83 E-value=6.9e-09 Score=97.43 Aligned_cols=92 Identities=11% Similarity=0.186 Sum_probs=72.8
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| ++||++|+.+.|.|.+++++|.+.++.|+.|++|.. +.+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~- 133 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQIS- 133 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHH-
Confidence 4689999999 999999999999999999999765799999988641 14678
Q ss_pred HcCCCC------CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 422 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~------~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
+.|++. .+|+++++++.+.+...+.+ ..++.++|.+.|+++
T Consensus 134 ~~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 134 RDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 889998 99999999655543222222 136789999988876
No 213
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.83 E-value=4.7e-09 Score=95.98 Aligned_cols=92 Identities=16% Similarity=0.226 Sum_probs=72.3
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| ++||++|+.+.|.|.+++++|++.++.|+.|++|.. +.+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA- 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH-
Confidence 4689999999 999999999999999999999755799999988731 14678
Q ss_pred HcCCCC-----CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 422 QKLQLG-----SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~-----~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
+.|++. .+|++++++..+.+...+.| ..++.++|.+.|+++
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 889999 89999999655543333323 134688888888765
No 214
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.83 E-value=1.8e-08 Score=89.55 Aligned_cols=90 Identities=14% Similarity=0.184 Sum_probs=69.3
Q ss_pred CCCcEEEEEecCC-ChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012452 370 RQEPWLVVLYAPW-CQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~FyA~w-C~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------~~~l~~~~~~I 426 (463)
.++++||+||++| |++|+.+.|.+.++.+++ . ++.|+.|+.|.. +.++. +.|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G-DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG-EAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S-SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH-HHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C-CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH-HHhCC
Confidence 4789999999999 999999999999999999 4 699999988731 14677 78998
Q ss_pred CC------CCEEEEEeCCCcCeeecCC----CCCCHHHHHHHHHHh
Q 012452 427 GS------FPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~------~PTi~~f~~g~~~~~~y~g----g~~~~~~L~~fI~~l 462 (463)
.. +|+++++++.+.+...+.| ...+.+++.+.|+++
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 76 4999999755544444432 123568888888775
No 215
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.79 E-value=1.3e-08 Score=95.67 Aligned_cols=92 Identities=13% Similarity=0.231 Sum_probs=72.3
Q ss_pred CCCcEEEEEec-CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~FyA-~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+||+ +||++|+...|.|.++.++|++.++.|+.|++|.. +..+.
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~- 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS- 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH-
Confidence 57899999997 99999999999999999999876799999998742 13567
Q ss_pred HcCCCC------CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 422 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~------~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
+.|+|. .+|++++++..+.+...+.+ .....+++.+.|+++
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 789998 89999999765543333322 124678888888765
No 216
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.78 E-value=1.2e-08 Score=95.39 Aligned_cols=92 Identities=14% Similarity=0.195 Sum_probs=72.5
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| ++||++|+.+.|.|.+++++|++.++.|+.|++|.. +.+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS- 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH-
Confidence 4689999999 999999999999999999999755799999987641 14678
Q ss_pred HcCCCC-----CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 422 QKLQLG-----SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~-----~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
+.|+|. .+|+++++++.+.+...+.+ ..++.++|.+.|+++
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 889998 89999999755543333322 135789999988875
No 217
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=98.78 E-value=2.6e-08 Score=96.50 Aligned_cols=155 Identities=12% Similarity=0.113 Sum_probs=97.9
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHcC-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHH
Q 012452 101 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTG-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQ 177 (463)
Q Consensus 101 eil~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~~-~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~ 177 (463)
+.|+..+...+ .+++|++|||+||+++ +|+.+.. .++..+++|++...+++.++++++++++|++++++.-.. .+.
T Consensus 14 ~~l~~~v~~~~~~~vvv~lSGGiDSsv~~~l~~~~~~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~i~~-~~~ 92 (268)
T 1xng_A 14 DFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAP-YDA 92 (268)
T ss_dssp HHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHH-HHH
T ss_pred HHHHHHHHHhCCCCEEEEccCcHHHHHHHHHHHHhCCCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEeChH-HHH
Confidence 34444444433 5699999999998766 7777764 678999999998889999999999999999987764322 122
Q ss_pred HHHHhcCCCCCCccchhhhh--hchhhhHHHHHHc--cCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEE
Q 012452 178 ALVRSKGLFSFYEDGHQECC--RVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 253 (463)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~Cc--~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~ 253 (463)
.+...... ..+...|. ...+...+.+... +..++.||. ++|.. +. ... .+ + .+...+
T Consensus 93 ~~~~~~~~----~~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tg~-~~E~~--~G-y~t-----~~-----g-d~~~~i 153 (268)
T 1xng_A 93 IFSSHFKD----ASLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSN-KSERM--LG-YGT-----LF-----G-DLACAI 153 (268)
T ss_dssp HHHHHCTT----CCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCC-HHHHH--HT-CSC-----TT-----T-TTCCSE
T ss_pred HHHHHhhh----cCCchHHHHHHHHHHHHHHHHHHHCCCEEEECCc-HHHHh--cC-ccc-----cc-----C-CCCeeE
Confidence 33322211 01222332 2233344444443 344555554 45542 11 110 11 0 123468
Q ss_pred EeCccCcHHHHHHHHHhCCCCc
Q 012452 254 NPVANVKGNDIWNFLRTMDVPI 275 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~~lp~ 275 (463)
+||.+|+..||+.|.+..|+|.
T Consensus 154 ~PL~~l~K~ev~~la~~~gip~ 175 (268)
T 1xng_A 154 NPIGELFKTEVYELARRLNIPK 175 (268)
T ss_dssp ETTTTSCHHHHHHHHHHTTCCH
T ss_pred EecCCCCHHHHHHHHHHcCCcH
Confidence 9999999999999999999984
No 218
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.78 E-value=8.9e-08 Score=90.09 Aligned_cols=106 Identities=11% Similarity=0.146 Sum_probs=86.8
Q ss_pred CCeeecChhhHHHHHhhcCCC-CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC--CcHHHHHHcCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQ-EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG--DQKEYAKQKLQLG 427 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~-k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~--~~~~l~~~~~~I~ 427 (463)
+.|.+++.+++..+.. .+ ..+++.|+.+||..|..+.+.|.++|+++++ ++.|+.+|++. + ..++ +.|++.
T Consensus 113 plv~e~t~~n~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~-~i~F~~vd~~~~~~-~~~l-~~fgl~ 186 (227)
T 4f9z_D 113 HMVTEYNPVTVIGLFN---SVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQG-KILFILVDSGMKEN-GKVI-SFFKLK 186 (227)
T ss_dssp CSEEECCHHHHHHHHH---SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTT-TCEEEEEETTSGGG-HHHH-HHTTCC
T ss_pred CceeecCcccHHHHhc---cCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhC-CEEEEEeCCccHhH-HHHH-HHcCCC
Confidence 4689999999999876 44 4455667789999999999999999999998 79999999974 4 6788 899998
Q ss_pred --CCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 --SFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 --~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+|++.++..+......+..+..+.++|.+|++.+
T Consensus 187 ~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 187 ESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp GGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 89999999855432344443468999999999875
No 219
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.77 E-value=1.5e-08 Score=90.44 Aligned_cols=92 Identities=17% Similarity=0.305 Sum_probs=67.5
Q ss_pred CCCcEEEEEecCCCh-hHHHhHHHHHHHHHHhcCC--CeEEEEEEcCCC--cH-------------------------HH
Q 012452 370 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAGN--GVKVGKFRADGD--QK-------------------------EY 419 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~-~C~~~~p~l~~la~~~~~~--~v~f~~VD~d~~--~~-------------------------~l 419 (463)
.++++||+||++||+ +|+...|.+.++.+++++. ++.|+.|++|.. +. ++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 578999999999999 9999999999999999763 499999998731 01 11
Q ss_pred HHHc----------------CCCCCCCEEEEEeCCCcCeeecCCCC-CCHHHHHHHHHHh
Q 012452 420 AKQK----------------LQLGSFPTILFFPKHSSKPIKYPSER-RDVDSLMAFVDAL 462 (463)
Q Consensus 420 ~~~~----------------~~I~~~PTi~~f~~g~~~~~~y~gg~-~~~~~L~~fI~~l 462 (463)
. +. |++..+|+++++++.+.+...+.|.. .+.++|.+.|+++
T Consensus 112 ~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 I-EEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp H-HHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHH
T ss_pred H-HHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHH
Confidence 1 11 24567899888866654444455522 2588999999876
No 220
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=98.75 E-value=2.1e-08 Score=96.10 Aligned_cols=156 Identities=10% Similarity=0.122 Sum_probs=97.7
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 012452 100 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 176 (463)
Q Consensus 100 ~eil~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~-~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~ 176 (463)
...|+..+.+.+ .+++|++|||.||+++ +|+.+. +.++..+++|.+...++..+.++++++++|++++++.-. ..+
T Consensus 14 ~~~l~d~v~~~g~~~vvv~lSGGiDSsv~a~l~~~~~g~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~i~-~~~ 92 (249)
T 3p52_A 14 CDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCKRALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIEIQ-SIL 92 (249)
T ss_dssp HHHHHHHHHTSSCSEEEEECCSSHHHHHHHHHHHHHHTTSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECCCH-HHH
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEECc-HHH
Confidence 344555566654 5799999999999776 777775 888999999999877888999999999999998765322 222
Q ss_pred HHHHHhcCCCCCCccchhhh--hhchhhhHHHHHHccCceEEEe-eeccCCcccccCCCceecCCCCcCCcCCCCCeEEE
Q 012452 177 QALVRSKGLFSFYEDGHQEC--CRVRKVRPLRRALKGLRAWITG-QRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 253 (463)
Q Consensus 177 ~~~~~~~g~~~~~~~~~~~C--c~~~Kv~Pl~r~l~~~~~~itG-~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~ 253 (463)
..+... .+ ...+...| |...+..-+........+.+.| -.++|.. ..... .+ + .+..-+
T Consensus 93 ~~~~~~--~~--~~~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tgn~se~~---~g~~t-----~~-----g-d~~~~i 154 (249)
T 3p52_A 93 DAFIKQ--SE--NTTLVSLGNFAARIRMSLLYDYSALKNSLVIGTSNKSELL---LGYGT-----IY-----G-DLACAF 154 (249)
T ss_dssp HHHHTT--CS--CCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHH---HTCSC-----TT-----T-TTCCSE
T ss_pred HHHHHh--cc--ccCCccHhHHHHHHHHHHHHHHHHHCCCeEEeCCCHHHHH---ccchh-----hh-----c-cccCcc
Confidence 232221 11 11222334 3444444455544444433333 2233321 11100 01 0 112348
Q ss_pred EeCccCcHHHHHHHHHhCCCC
Q 012452 254 NPVANVKGNDIWNFLRTMDVP 274 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~~lp 274 (463)
+||.+++..||+.+.+..|+|
T Consensus 155 ~PL~~l~K~eV~~la~~~gip 175 (249)
T 3p52_A 155 NPIGSLYKSEIYALAKYLNLH 175 (249)
T ss_dssp ETTTTSCHHHHHHHHHHTTCC
T ss_pred ccccCCcHHHHHHHHHHcCCc
Confidence 999999999999999999987
No 221
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=98.72 E-value=5.8e-08 Score=93.00 Aligned_cols=157 Identities=15% Similarity=0.086 Sum_probs=94.9
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHH
Q 012452 101 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQA 178 (463)
Q Consensus 101 eil~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~ 178 (463)
+.|+..+...+ .+++|++|||.||+++ +|+.+...+...++++++...++..++++++++++|++++++.-. ..+..
T Consensus 18 ~~l~~~v~~~~~~~vvv~lSGGiDSsv~a~l~~~~~~~~~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~~~-~~~~~ 96 (249)
T 3fiu_A 18 NWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVKTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTISIQ-PAYEA 96 (249)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSHHHHHHHHHHHHTTSCEEEEECCCTTSCHHHHHHHHHHHHHHTCEEEECCCH-HHHHH
T ss_pred HHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHHHhCCCCEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEECh-HHHHH
Confidence 34444444444 5699999999998776 788877666558999998778899999999999999988776322 22333
Q ss_pred HHHhcCCCCCC-ccchhhhh-----hchhhhHHHHHHcc--CceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCe
Q 012452 179 LVRSKGLFSFY-EDGHQECC-----RVRKVRPLRRALKG--LRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSL 250 (463)
Q Consensus 179 ~~~~~g~~~~~-~~~~~~Cc-----~~~Kv~Pl~r~l~~--~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~ 250 (463)
....-. +.+. ......|| ...+..-+...-.. ..++.|| .++|. +.......-| +.
T Consensus 97 ~~~~~~-~~~~~~~~~~~~~~~Ni~~r~R~~~l~~~A~~~g~~vl~TG-n~sE~---~~G~~t~~gd-----------~~ 160 (249)
T 3fiu_A 97 FLASTQ-SFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTD-NACEW---YMGYFTKFGD-----------GA 160 (249)
T ss_dssp HHHHTG-GGC------CHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCC-CHHHH---HHTCSCTTTT-----------TC
T ss_pred HHHHHH-hhccCCCCcChhHHHHHHHHHHHHHHHHHHHHcCCEEEECC-CHHHH---hcCchhccCC-----------CC
Confidence 332110 0000 01122334 22233333333333 3345556 45553 2221111111 22
Q ss_pred EEEEeCccCcHHHHHHHHHhCCCC
Q 012452 251 VKWNPVANVKGNDIWNFLRTMDVP 274 (463)
Q Consensus 251 ~k~~PI~dWt~~DVw~yi~~~~lp 274 (463)
--++||.+++..||+.+.+..|+|
T Consensus 161 ~~i~PL~~l~K~eVr~lA~~lglp 184 (249)
T 3fiu_A 161 ADILPLVNLKKSQVFELGKYLDVP 184 (249)
T ss_dssp CSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred cceeecccCcHHHHHHHHHHcCCc
Confidence 358999999999999999999986
No 222
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=98.71 E-value=4.2e-08 Score=94.36 Aligned_cols=147 Identities=16% Similarity=0.165 Sum_probs=92.1
Q ss_pred CcEEEEechhHHHHHH-HHHHHcC--CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTG--RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 188 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~--~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 188 (463)
.+++|++|||+||+++ +|+.+.. .++..+++|+|.. ++.++++++++++|++++++.-.. .+..+.......
T Consensus 23 ~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~--~~~~~a~~~a~~lgi~~~~i~i~~-~~~~~~~~l~~~-- 97 (257)
T 2e18_A 23 NGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFEN--KDVEDAKLVAEKLGIGYKVINIKP-IVDSFVENLELN-- 97 (257)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCS--THHHHHHHHHHHHTCEEEECCCHH-HHHHHHHHHCSC--
T ss_pred CcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCc--hHHHHHHHHHHHhCCCEEEEEChH-HHHHHHHHhccc--
Confidence 5699999999998766 7777753 5789999999954 789999999999999887764332 122232222110
Q ss_pred Cccchhhhh--hchhhhHHHHHHc--cCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEEEeCccCcHHHH
Q 012452 189 YEDGHQECC--RVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDI 264 (463)
Q Consensus 189 ~~~~~~~Cc--~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~DV 264 (463)
..+...|. ...+..-+.+... +..++.||... |.. +.-.. .+ + .+...++||.+|+..||
T Consensus 98 -~~~~~~~n~~ar~r~~~l~~~A~~~g~~vl~tg~~~-e~~--~Gy~t------~~-----g-~~~~~i~Pl~~l~K~ev 161 (257)
T 2e18_A 98 -LDRKGLGNIMSRTRMIMLYAHANSLGRIVLGTSNRS-EFL--TGYFT------KW-----G-DGASDYAPIINLYKTEV 161 (257)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCHH-HHH--HTCSC------TT-----S-TTCSSBCTTTTSCHHHH
T ss_pred -cccchhHHHHHHHHHHHHHHHHHHcCCEEEEcCchh-HHh--cCCee------cc-----C-CCccCEeecCCCcHHHH
Confidence 11122231 1233334444443 44566667643 321 11100 01 0 12345899999999999
Q ss_pred HHHHHhCCCCccchh
Q 012452 265 WNFLRTMDVPINSLH 279 (463)
Q Consensus 265 w~yi~~~~lp~npLy 279 (463)
+.|.+.+|+|++-+.
T Consensus 162 ~~la~~~gip~~i~~ 176 (257)
T 2e18_A 162 WEIAKRIGVPERIVK 176 (257)
T ss_dssp HHHHHHHTCCHHHHH
T ss_pred HHHHHHcCCCHHHhC
Confidence 999999999975444
No 223
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=98.67 E-value=2.9e-08 Score=105.21 Aligned_cols=167 Identities=15% Similarity=0.195 Sum_probs=97.7
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcH-HHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNP-ETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 188 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~-~~~i~vi~~DTg~~fp-eT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 188 (463)
++++|++|||+||+++ +|+++. +.++..+|+|+|.... |..+.++.+++++|++++++.-... +.. ...|.. -
T Consensus 231 ~kvlvalSGGvDSsvla~ll~~~~G~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-~~~--~l~g~~-~ 306 (527)
T 3tqi_A 231 EQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLVDTGLLRLNEVDEVLNVFQKHLGAKVICVDAKDR-FMK--ALKGIS-D 306 (527)
T ss_dssp SCEEEECTTTHHHHHHHHHHHHHHGGGEEEEEECCSCSCTTHHHHHHHHHTTSSCCEEEEECCHHH-HHS--SSSSCC-C
T ss_pred CeEEEEEecCcCHHHHHHHHHHHhCCeEEEEEeccCCCChhHHHHHHHHHHHHcCCcEEEEeChHH-HHH--hhcCCC-C
Confidence 5799999999998776 788775 8889999999998654 5555556699999999988743211 111 112211 1
Q ss_pred CccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCcccc---cC-CCceecCCCCcCCcCCCCCeEEEEeCccCcHH
Q 012452 189 YEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTR---SE-IPVVQVDPVFEGLEGGVGSLVKWNPVANVKGN 262 (463)
Q Consensus 189 ~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~R---a~-~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~ 262 (463)
+......|+. ....-+.+..+ +.+.+++|...++-..++ .. ...+.......+.. ...+.-.+.||.+++.+
T Consensus 307 ~~~~r~~~~~-~~~~~~~~~A~~~g~~~la~Gh~~dD~~Et~~~~~g~~~~ik~~~~l~gl~-~~~~~~iirPL~~l~K~ 384 (527)
T 3tqi_A 307 PEEKRKIAGE-QFIRVFEEQAKKLNVKWLGQGTIYPDVIESAKTKTGKGHIIKTHHNVGGLP-LNMELKLIEPLRELFKD 384 (527)
T ss_dssp HHHHHHHHHH-HHHHHHHHTTTTTTCCEEECCCCHHHHHCC---------------------------CEECTTTTCCHH
T ss_pred hhhhhhhhHH-HHHHHHHHHHHHcCCCEEEccccCCccccccccCCChhheeeeecccccCc-ccccCccccchhcCCHH
Confidence 1112223332 22344444444 456899999655532111 00 00000000000000 01123468999999999
Q ss_pred HHHHHHHhCCCCccchhccCCc
Q 012452 263 DIWNFLRTMDVPINSLHSQGYI 284 (463)
Q Consensus 263 DVw~yi~~~~lp~npLy~~Gy~ 284 (463)
||.+|.+++|+|+.-.+.+-|+
T Consensus 385 EIr~~a~~lGlp~~~v~~~P~p 406 (527)
T 3tqi_A 385 EVRKLGLELGLPADLIYRHPFP 406 (527)
T ss_dssp HHHHHHHHHTCCHHHHTCCCCC
T ss_pred HHHHHHHHcCCChhhhccCCCC
Confidence 9999999999999777776544
No 224
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=98.66 E-value=3.5e-08 Score=100.19 Aligned_cols=160 Identities=12% Similarity=0.090 Sum_probs=101.9
Q ss_pred CCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCC--------cHHHHHHHHHHHHHhCCcEEEEcCChHHHHH---
Q 012452 111 GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRL--------NPETYRFFDEVEKHFGIRIEYMFPDAVEVQA--- 178 (463)
Q Consensus 111 ~~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~--------fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~--- 178 (463)
+.+++|++|||+||+++ +|+.+.+.++..+|+|++.+ ..+..+.++++++++|++++++.-.. .+++
T Consensus 17 ~~kVvVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~~~-~f~~~v~ 95 (380)
T 2der_A 17 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAA-EYWDNVF 95 (380)
T ss_dssp CCEEEEECCSCSTTHHHHHHHHTTCCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECHH-HHHHHTH
T ss_pred CCEEEEEEEChHHHHHHHHHHHHcCCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeCcH-HHHHHHH
Confidence 35799999999998666 88888888899999998754 24678999999999999998875432 2221
Q ss_pred --HHHh--cCCCCCCccchhhhhhchhhhHHHHHHc---cCceEEEeeeccCCcc-cccCCCceecCC----CCcCCcCC
Q 012452 179 --LVRS--KGLFSFYEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSPG-TRSEIPVVQVDP----VFEGLEGG 246 (463)
Q Consensus 179 --~~~~--~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~---~~~~~itG~Rr~ES~~-~Ra~~~~~~~d~----~~~~~~~~ 246 (463)
.+.+ .|.. + +..-.|....|...+.+... +.+.++||...++... .|..+.. ..+. .|.-..-.
T Consensus 96 ~~~~~ey~~G~t--p-npc~~Cnr~ik~~~l~~~A~~~~Gad~IatGH~a~d~~~~~~~~l~r-g~~~~kdqsy~L~~l~ 171 (380)
T 2der_A 96 ELFLAEYKAGRT--P-NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLR-GLDSNKDQSYFLYTLS 171 (380)
T ss_dssp HHHHHHHHTTCC--C-CHHHHHHHHTTTTHHHHHHHHTTCCSEEECCCSCEEEEETTEEEEEC-CSSTTTCCGGGGSSCC
T ss_pred HHHHHHHHcCCC--C-ChhHHHHHHHHHHHHHHHHHhhcCCCEEEEccccccccccchHHHhc-ccccccccceeecCCC
Confidence 1222 2221 1 12234555567777776654 4568999987765310 1111100 0111 00000000
Q ss_pred C-CCeEEEEeCccCcHHHHHHHHHhCCCCc
Q 012452 247 V-GSLVKWNPVANVKGNDIWNFLRTMDVPI 275 (463)
Q Consensus 247 ~-~~~~k~~PI~dWt~~DVw~yi~~~~lp~ 275 (463)
. .....+.||.+++..||..|.+++++|+
T Consensus 172 ~~~l~~~i~PL~~~~K~eVr~~A~~~Gl~~ 201 (380)
T 2der_A 172 HEQIAQSLFPVGELEKPQVRKIAEDLGLVT 201 (380)
T ss_dssp HHHHHHEECCGGGSCHHHHHHHHHHTTCC-
T ss_pred hhhcceeEccCCCCCHHHHHHHHHHcCCCC
Confidence 0 0135799999999999999999999985
No 225
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.66 E-value=7.2e-08 Score=90.29 Aligned_cols=43 Identities=21% Similarity=0.246 Sum_probs=39.8
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 413 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d 413 (463)
++++|||+|||+||++|+ ..|.|+++.++|++.++.|+.|.++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 589999999999999998 8999999999998767999999876
No 226
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.66 E-value=7.8e-08 Score=88.65 Aligned_cols=89 Identities=10% Similarity=-0.013 Sum_probs=60.2
Q ss_pred CCCcEEEEEecCCChh-HHHhHHHHHHHHHHhcC---CCeEEEEEEcCCC---------------------------cHH
Q 012452 370 RQEPWLVVLYAPWCQF-CQAMEGSYVELADKLAG---NGVKVGKFRADGD---------------------------QKE 418 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~-C~~~~p~l~~la~~~~~---~~v~f~~VD~d~~---------------------------~~~ 418 (463)
.++++||+||++||++ |+.+.|.|.++.+++.. .++.|+.|++|.. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 5789999999999997 99999999998887752 3699999988731 024
Q ss_pred HHHHcCCCC-CCC---------------EEEEEeCCCcCeeecCCCCCCHHHHHHHHH
Q 012452 419 YAKQKLQLG-SFP---------------TILFFPKHSSKPIKYPSERRDVDSLMAFVD 460 (463)
Q Consensus 419 l~~~~~~I~-~~P---------------Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~ 460 (463)
++ +.|+|. ..| ++++++..+.+...+.| ..+.+.+.+.|.
T Consensus 120 ~~-~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g-~~~~~~~~~~i~ 175 (200)
T 2b7k_A 120 AC-KKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGR-NYDEKTGVDKIV 175 (200)
T ss_dssp HH-HHTTC--------------CTTTCCCEEEECTTSCEEEEECT-TCCTTHHHHHHH
T ss_pred HH-HHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCC-CCCHHHHHHHHH
Confidence 66 678886 444 66777555443444544 455555544444
No 227
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.65 E-value=2.7e-08 Score=89.68 Aligned_cols=72 Identities=13% Similarity=0.171 Sum_probs=57.1
Q ss_pred CCCcEEEEEecCC-ChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------cHHHHHHcCCCC
Q 012452 370 RQEPWLVVLYAPW-CQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------QKEYAKQKLQLG 427 (463)
Q Consensus 370 ~~k~vlV~FyA~w-C~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------~~~l~~~~~~I~ 427 (463)
.++++||+||++| |++|+...|.|.++.++ . ++.|+.|+.|.. +.++. +.|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFG-EDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHH-HHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHH-HHhCCc
Confidence 4789999999999 99999999999999988 3 599999988721 14577 789998
Q ss_pred CC---------CEEEEEeCCCcCeeec
Q 012452 428 SF---------PTILFFPKHSSKPIKY 445 (463)
Q Consensus 428 ~~---------PTi~~f~~g~~~~~~y 445 (463)
.. |+++++++.+.+...+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAYTE 145 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEEEE
T ss_pred ccccccCCcccceEEEECCCCeEEEEE
Confidence 77 8888887555443334
No 228
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.65 E-value=7e-08 Score=86.60 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=64.2
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 413 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d------------------------------------ 413 (463)
..+++|+.|+.+|||+|+.+.|.++++.+++.+ +.|...++.
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 467899999999999999999999999988755 666665532
Q ss_pred ---------------------------------CCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHH
Q 012452 414 ---------------------------------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 460 (463)
Q Consensus 414 ---------------------------------~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~ 460 (463)
.+ .+++ ++++|.++||+++ +|+ .+.| ..+.+.|.+.|+
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~-~~~a-~~~gv~gtPt~~i--~g~----~~~G-~~~~~~l~~~i~ 169 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQS-MALA-QKLGFNGTPSFVV--EDA----LVPG-FVEQSQLQDAVD 169 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHH-HHHH-HHHTCCSSSEEEE--TTE----EECS-CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHH-HHHH-HHcCCccCCEEEE--CCE----EeeC-CCCHHHHHHHHH
Confidence 12 3456 6889999999987 453 3445 689999999998
Q ss_pred Hh
Q 012452 461 AL 462 (463)
Q Consensus 461 ~l 462 (463)
++
T Consensus 170 ~~ 171 (175)
T 3gyk_A 170 RA 171 (175)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 229
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.64 E-value=3.8e-08 Score=92.05 Aligned_cols=81 Identities=12% Similarity=0.299 Sum_probs=61.0
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 413 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d------------------------------------ 413 (463)
.++++|+.||++|||+|+.+.|.++++.+. ++.|..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 160 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAP 160 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCCh
Confidence 467899999999999999999999998752 3666544321
Q ss_pred --------CCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 414 --------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 414 --------~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+ .+++ ++|+|.++||+ +|.+|. .+.| ..+.++|.++|+++
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gtPt~-v~~dG~----~~~G-~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 161 ASCDVDIADH-YALG-VQLGVSGTPAV-VLSNGT----LVPG-YQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCSCCHHHH-HHHH-HHHTCCSSSEE-ECTTSC----EEES-CCCHHHHHHHHHHH
T ss_pred hHHHHHHHHH-HHHH-HHcCCCccCEE-EEcCCe----EecC-CCCHHHHHHHHHHh
Confidence 12 5677 78999999999 555664 2334 67889999998764
No 230
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.61 E-value=2e-08 Score=89.04 Aligned_cols=92 Identities=16% Similarity=0.287 Sum_probs=63.4
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHcCCCC-
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLG- 427 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--------------------~~~l~~~~~~I~- 427 (463)
++++++|+|| ++||++|....|.+.++.+++++.++.++.|+.|.. +.+++ +.|+|.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~-~~ygv~~ 107 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVV-KKYNVAW 107 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHH-HHTTCEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHH-HHcCCcc
Confidence 5789999999 999999999999999999999877899999987642 13566 677763
Q ss_pred ----------CCCEEEEEeCCCcCeeec----CCCCCCHHHHHHHHHHh
Q 012452 428 ----------SFPTILFFPKHSSKPIKY----PSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ----------~~PTi~~f~~g~~~~~~y----~gg~~~~~~L~~fI~~l 462 (463)
..|+++++++.+.+...+ ..+..+.++|.+.|++|
T Consensus 108 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 108 EFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 467888886555432221 12356889999999987
No 231
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.61 E-value=9.3e-08 Score=86.51 Aligned_cols=107 Identities=7% Similarity=-0.044 Sum_probs=75.2
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------- 415 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--------------- 415 (463)
.+..++++.+.-.-- .++++||+|| +.||++|....|.|.++.++|++.++.|+.|.+|..
T Consensus 35 ~l~~~~G~~v~l~d~---~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~ 111 (179)
T 3ixr_A 35 PLMLSGSTCKTLSDY---TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFP 111 (179)
T ss_dssp CEEEGGGEEECGGGG---TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSC
T ss_pred eEECCCCCEEeHHHH---CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceE
Confidence 455555544322111 5778999998 999999999999999999999887899999987642
Q ss_pred -----cHHHHHHcCCCCC------------CCEEEEEeCCCcCeeecCC--CCCCHHHHHHHHHHh
Q 012452 416 -----QKEYAKQKLQLGS------------FPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 462 (463)
Q Consensus 416 -----~~~l~~~~~~I~~------------~PTi~~f~~g~~~~~~y~g--g~~~~~~L~~fI~~l 462 (463)
+.+++ +.|++.. .|++++++..+.+...+.+ ...+.+++.+.|+++
T Consensus 112 ~l~D~~~~~~-~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 112 LVSDSDAILC-KAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp EEECTTCHHH-HHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred EEECCchHHH-HHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 14567 7788753 6889999755543333332 134567788877765
No 232
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.60 E-value=6.5e-08 Score=85.38 Aligned_cols=66 Identities=14% Similarity=0.148 Sum_probs=52.9
Q ss_pred CCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHcCCCCCC
Q 012452 371 QEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQLGSF 429 (463)
Q Consensus 371 ~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--------------------~~~l~~~~~~I~~~ 429 (463)
++++||+|| ++||++|....|.|.++.+++++.+ .|+.|.+|.. +.+++ +.|++...
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~ 112 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFI-GLLGAKKT 112 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHH-HHHTCBSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHH-HHhCCccc
Confidence 347889987 9999999999999999999998766 8888877531 14677 78999999
Q ss_pred C-------EEEEEeCCC
Q 012452 430 P-------TILFFPKHS 439 (463)
Q Consensus 430 P-------Ti~~f~~g~ 439 (463)
| ++++ ++|+
T Consensus 113 p~~g~~~~~~li-~~G~ 128 (159)
T 2a4v_A 113 PLSGSIRSHFIF-VDGK 128 (159)
T ss_dssp SSSCBCCEEEEE-ETTE
T ss_pred ccCCccceEEEE-cCCE
Confidence 8 5555 7776
No 233
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.59 E-value=8.6e-08 Score=89.39 Aligned_cols=82 Identities=13% Similarity=0.225 Sum_probs=62.3
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC------------------------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD------------------------------------ 413 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d------------------------------------ 413 (463)
.++.+|+.|+++|||+|+.+.|.++++.+. ++.|..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~ 160 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKE 160 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCCh
Confidence 467899999999999999999999997652 3555544321
Q ss_pred --------CCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHhC
Q 012452 414 --------GDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDALR 463 (463)
Q Consensus 414 --------~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l~ 463 (463)
.+ .+++ ++++|+++||+++ .+|+ .+.| ..+.++|.++|++.+
T Consensus 161 ~~~~~~v~~~-~~l~-~~~gV~gTPt~vi-~nG~----~~~G-~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 161 VKTPNIVKKH-YELG-IQFGVRGTPSIVT-STGE----LIGG-YLKPADLLRALEETA 210 (211)
T ss_dssp CCCSSHHHHH-HHHH-HHHTCCSSCEEEC-TTSC----CCCS-CCCHHHHHHHHHHCC
T ss_pred HHHHHHHHHH-HHHH-HHcCCCcCCEEEE-eCCE----EecC-CCCHHHHHHHHHhcc
Confidence 12 4567 7899999999987 6665 2345 689999999998753
No 234
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.58 E-value=1.3e-07 Score=100.05 Aligned_cols=165 Identities=15% Similarity=0.171 Sum_probs=97.0
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCCcHHHHHHH-HHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFF-DEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 188 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~-~~~i~vi~~DTg~~fpeT~~~~-~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~~~ 188 (463)
+++++++|||+||+++ +|+.+. +.++..+|+|+|.......+.+ +.+++++|++++++.-.. .+...+ .|.. -
T Consensus 228 ~~vvvalSGGvDSsv~a~ll~~a~G~~v~av~v~~g~~~~~e~~~~~~~la~~lgi~~~~v~~~~-~f~~~l--~~~~-~ 303 (525)
T 1gpm_A 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAED-RFLSAL--AGEN-D 303 (525)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEECHH-HHHHHH--TTCC-C
T ss_pred cceEEEecCCCCHHHHHHHHHHHhCCCEEEEEEeCCCCCchHHHHHHHHHHHHhCCcEEEEeccH-HHHHhh--cCCC-C
Confidence 5799999999998766 777775 7789999999997654445555 447888999998875432 222211 2321 1
Q ss_pred CccchhhhhhchhhhHHHHHHc---cCceEEEeeeccCCccc-c----cCCCceecCCCCcCCcCCCCCeEEEEeCccCc
Q 012452 189 YEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSPGT-R----SEIPVVQVDPVFEGLEGGVGSLVKWNPVANVK 260 (463)
Q Consensus 189 ~~~~~~~Cc~~~Kv~Pl~r~l~---~~~~~itG~Rr~ES~~~-R----a~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt 260 (463)
++.....|+.. ...-+.+..+ +.+.+++|+-.++-..+ + ..-...... ...+.. .......+.||.+++
T Consensus 304 pe~~~~~~~~~-~~~~l~~~A~~~~g~~~l~~Gt~~~D~~E~~~~~~~~s~~iks~~-~l~gl~-~~~~~~~i~PL~~l~ 380 (525)
T 1gpm_A 304 PEAKRKIIGRV-FVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHH-NVGGLP-KEMKMGLVEPLKELF 380 (525)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHSSSEEEEECCCCHHHHHHTTC------------------------CCEEECTTTTCC
T ss_pred hHHhhhhhhHH-HHHHHHHHHHhcCCCCEEEeCCCCcchhhhcCccccccccccccc-cccccc-cccCCcEEehhhcCC
Confidence 11112233332 3344555554 44688999843321101 1 100000000 000000 001245689999999
Q ss_pred HHHHHHHHHhCCCCccchhccCC
Q 012452 261 GNDIWNFLRTMDVPINSLHSQGY 283 (463)
Q Consensus 261 ~~DVw~yi~~~~lp~npLy~~Gy 283 (463)
.+||++|.++.|+|+..++++-|
T Consensus 381 K~EVr~la~~lglp~~i~~~~P~ 403 (525)
T 1gpm_A 381 KDEVRKIGLELGLPYDMLYRHPF 403 (525)
T ss_dssp HHHHHHHHHHTTCCHHHHTSCCC
T ss_pred HHHHHHHHHHcCCCHHhcccCCC
Confidence 99999999999999887777654
No 235
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.56 E-value=1.2e-07 Score=89.15 Aligned_cols=92 Identities=11% Similarity=0.206 Sum_probs=70.0
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| ++||++|+...|.|.++.++|++.++.|+.|.+|.. +..++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS- 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH-
Confidence 4689999999 999999999999999999999755799999987642 02455
Q ss_pred HcCCC-----CCCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 422 QKLQL-----GSFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I-----~~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
+.|++ ..+|+++++++.+.+...+.+ ...+.++|.+.|+++
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 67777 368999999765543333222 136788999988876
No 236
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.53 E-value=1e-07 Score=74.24 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=53.1
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH--HcCCCCCCCEEEEEeCCCcCeeecCCCCCCH
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK--QKLQLGSFPTILFFPKHSSKPIKYPSERRDV 452 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~--~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~ 452 (463)
++.|+++||++|+.+.+.|+++ ++.|..+|++.+ +++.. .++++.++|+++ .+|+ .+ .| .+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~~~-~~~~~~~~~~g~~~vP~~~--~~g~--~~--~g--~~~ 66 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------GFDFEMINVDRV-PEAAEALRAQGFRQLPVVI--AGDL--SW--SG--FRP 66 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHHHHHHHTTCCSSCEEE--ETTE--EE--ES--CCH
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHHHhCCCccCEEE--ECCE--EE--ec--CCH
Confidence 6789999999999999998863 477889999987 65541 258999999983 4554 22 22 567
Q ss_pred HHHHHHHHH
Q 012452 453 DSLMAFVDA 461 (463)
Q Consensus 453 ~~L~~fI~~ 461 (463)
++|.++|++
T Consensus 67 ~~l~~~l~~ 75 (81)
T 1h75_A 67 DMINRLHPA 75 (81)
T ss_dssp HHHGGGSCC
T ss_pred HHHHHHHhc
Confidence 788877654
No 237
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.52 E-value=3.3e-07 Score=85.21 Aligned_cols=43 Identities=19% Similarity=0.122 Sum_probs=39.3
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 413 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d 413 (463)
+++++||+|||+||++| ...|.|.++.++|++.++.|+.|.++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 57899999999999999 68899999999998767999999876
No 238
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.52 E-value=1.4e-07 Score=90.38 Aligned_cols=92 Identities=18% Similarity=0.154 Sum_probs=70.1
Q ss_pred CCC-cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------------cHHHHHH
Q 012452 370 RQE-PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------------QKEYAKQ 422 (463)
Q Consensus 370 ~~k-~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--------------------------~~~l~~~ 422 (463)
.++ .+|++||++||++|..+.+.|.+++++|++.++.|+.|++|.. +.+++ +
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia-~ 110 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA-R 110 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH-H
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH-H
Confidence 355 4566889999999999999999999999866799999998642 14577 7
Q ss_pred cCCCC-------CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 423 KLQLG-------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~-------~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
.|+|. .+|++++++..+.+...+.+ ..++.++|.+.|+++
T Consensus 111 ~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 111 RLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 88887 89999999755543222222 126899999999876
No 239
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.51 E-value=3e-07 Score=84.07 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=39.5
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 413 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d 413 (463)
.++++||.||++||++|+.+.|.++++.+++.+ ++.|..++++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 578899999999999999999999999999987 7999998875
No 240
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.50 E-value=2.6e-07 Score=86.02 Aligned_cols=92 Identities=11% Similarity=0.170 Sum_probs=70.4
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| ++||++|....|.|.++.++|++.++.|+.|.+|.. +.+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~- 125 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 125 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH-
Confidence 4689999999 999999999999999999999866799999987532 02456
Q ss_pred HcCCCC------CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 422 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~------~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
+.|++. .+|+++++++.+.+...+.+ ..++.+++.+.|+++
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 677874 69999999765543333322 125788999888875
No 241
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.50 E-value=2.3e-07 Score=70.74 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=54.0
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHH---cCCCCCCCEEEEEeCCCcCeeecCCCCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQ---KLQLGSFPTILFFPKHSSKPIKYPSERRD 451 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~---~~~I~~~PTi~~f~~g~~~~~~y~gg~~~ 451 (463)
++.|+++||++|+.+.+.++++ ++.|..+|++.+ +++. + ++++.++|++++ +|+ . ..| .+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~~~-~~~~-~~~~~~~~~~vP~l~~--~g~--~--~~g--~~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDISLD-DEAR-DYVMALGYVQAPVVEV--DGE--H--WSG--FR 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTC-HHHH-HHHHHTTCBCCCEEEE--TTE--E--EES--CC
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECCCC-HHHH-HHHHHcCCCccCEEEE--CCe--E--EcC--CC
Confidence 6789999999999999998864 377888999987 6655 4 799999999973 554 2 223 57
Q ss_pred HHHHHHHHH
Q 012452 452 VDSLMAFVD 460 (463)
Q Consensus 452 ~~~L~~fI~ 460 (463)
.++|.++|+
T Consensus 66 ~~~l~~~l~ 74 (75)
T 1r7h_A 66 PERIKQLQA 74 (75)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888888875
No 242
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.48 E-value=1.3e-06 Score=74.50 Aligned_cols=96 Identities=16% Similarity=0.159 Sum_probs=79.4
Q ss_pred Ceeec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 352 NLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 352 ~V~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
.+..| +.+++++++. .+++++|-|+++||++| .+.|.++|+.+ + .+.|+..+ + .+++ ++|++. .|
T Consensus 22 ~~~~i~s~~e~e~fi~---~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t~---~-~~v~-~~~~v~-~~ 87 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIA---ATEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIST---D-SEVL-THYNIT-GN 87 (124)
T ss_dssp CCEECCSHHHHHHHHH---TSSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEEC---C-HHHH-HHTTCC-SS
T ss_pred cceEcCCHHHHHHHHh---cCCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEEC---h-HHHH-HHcCCC-CC
Confidence 44445 4578888886 78899999999999999 56899999999 4 59998774 3 6888 899998 89
Q ss_pred EEEEEeCCCcCeeecCC---CCCCHHHHHHHHHH
Q 012452 431 TILFFPKHSSKPIKYPS---ERRDVDSLMAFVDA 461 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~ 461 (463)
++++|++.......|.| +..+.+.|.+||+.
T Consensus 88 ~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 88 TICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 121 (124)
T ss_dssp CEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHH
T ss_pred eEEEEEcCCCCceeecCcccCCCCHHHHHHHHHH
Confidence 99999987655778875 46899999999985
No 243
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.48 E-value=3.5e-07 Score=82.00 Aligned_cols=92 Identities=11% Similarity=0.112 Sum_probs=68.4
Q ss_pred CCCcEEEEEecCCCh-hHHHhHHHHHHHHHHhcC--CCeEEEEEEcCC-Cc-----------------------------
Q 012452 370 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAG--NGVKVGKFRADG-DQ----------------------------- 416 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~-~C~~~~p~l~~la~~~~~--~~v~f~~VD~d~-~~----------------------------- 416 (463)
.++++||+||++||+ .|....+.+.++.+++.. .++.++.|.+|. +.
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 478999999999997 699999999999999963 468888888762 10
Q ss_pred HHHHHHcCC---------CCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQ---------LGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~---------I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+++ +.|+ +...|++++++..+.+...+.|...+.++|.+.|+++
T Consensus 107 ~~~~-~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLL-DAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHH-HHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHH-HHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 2344 4444 3456888888765554444566467899999998875
No 244
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.47 E-value=4.5e-07 Score=82.54 Aligned_cols=92 Identities=12% Similarity=0.095 Sum_probs=68.8
Q ss_pred CCCcEEEEEec-CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------cHHHHHHcC
Q 012452 370 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------QKEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~FyA-~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~------------------------~~~l~~~~~ 424 (463)
.++++||+||+ +||++|....|.|.++.++|++.++.|+.|.+|.. +.+++ +.|
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~-~~y 107 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALT-RNF 107 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHH-HHT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHH-HHh
Confidence 46899999995 99999999999999999999766799999987632 02455 567
Q ss_pred CCC------CCCEEEEEeCCCcCeeecCCC---CCCHHHHHHHHHHh
Q 012452 425 QLG------SFPTILFFPKHSSKPIKYPSE---RRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~------~~PTi~~f~~g~~~~~~y~gg---~~~~~~L~~fI~~l 462 (463)
++. .+|++++++..+.+...+.+. .++.++|.+.|+++
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 775 369999997655433333331 24688899888875
No 245
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.44 E-value=9.5e-08 Score=85.39 Aligned_cols=98 Identities=12% Similarity=0.279 Sum_probs=71.6
Q ss_pred HHHHHhhcCCCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHH
Q 012452 361 MENLARLDHRQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEY 419 (463)
Q Consensus 361 f~~~i~~~~~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--------------------~~~l 419 (463)
+.++.. ++++++|+|| ++||++|....|.|.++.++|++.++.++.|+.|.. +.++
T Consensus 26 Lsd~~~---~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v 102 (164)
T 4gqc_A 26 LYEVLK---RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREV 102 (164)
T ss_dssp HHHHHH---TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHH
T ss_pred HHHHhc---CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHH
Confidence 445544 6889999998 999999999999999999999877899999987642 1456
Q ss_pred HHHcCCCC----------CCCEEEEEeCCCcCeeec----CCCCCCHHHHHHHHHHh
Q 012452 420 AKQKLQLG----------SFPTILFFPKHSSKPIKY----PSERRDVDSLMAFVDAL 462 (463)
Q Consensus 420 ~~~~~~I~----------~~PTi~~f~~g~~~~~~y----~gg~~~~~~L~~fI~~l 462 (463)
+ +.|+|. ..|+++++++.+.+...+ ..+..+.+++.+.|++|
T Consensus 103 ~-~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 103 I-KLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp H-HHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred H-HHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 6 677773 368888886555432222 12245788888888765
No 246
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.41 E-value=8.5e-07 Score=78.59 Aligned_cols=90 Identities=10% Similarity=0.077 Sum_probs=65.9
Q ss_pred CCCcEEEEEec-CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012452 370 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~FyA-~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------~~~l~~~~~~I 426 (463)
.++++||+||+ +||++|....|.|.++.+++ . ++.|+.|+.|.. +..++ +.|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~-~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D-NTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFG-RDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHH-HHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHH-HHhCC
Confidence 57899999995 99999999999999999888 4 688888876532 13455 56777
Q ss_pred C----C--CCEEEEEeCCCcCeeecCC----CCCCHHHHHHHHHHh
Q 012452 427 G----S--FPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~----~--~PTi~~f~~g~~~~~~y~g----g~~~~~~L~~fI~~l 462 (463)
. + .|+++++++.+.+...+.| ...+.+++.+.|++|
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~l 163 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKAL 163 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHHC
T ss_pred ccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHhC
Confidence 5 3 3999999765544333322 234568888888764
No 247
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.41 E-value=4.6e-07 Score=82.59 Aligned_cols=42 Identities=26% Similarity=0.343 Sum_probs=37.6
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 412 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~ 412 (463)
.++++|+.|+++|||+|+.+.|.+.++.+++.+ ++.|..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEeh
Confidence 468899999999999999999999999999987 788876665
No 248
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.40 E-value=7.9e-07 Score=84.54 Aligned_cols=92 Identities=11% Similarity=0.186 Sum_probs=71.1
Q ss_pred CCCcEEEEEec-CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~FyA-~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+||+ +||++|....|.|.++.++|++.++.|+.|.+|.. +.+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~- 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS- 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH-
Confidence 47899999999 99999999999999999999876799999987642 13566
Q ss_pred HcCCCC------CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 422 QKLQLG------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~------~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
+.|++. .+|++++++..+.+...+.+ ..++.+++.+.|+++
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 678887 68999999765543222111 136788999888876
No 249
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=98.38 E-value=7.5e-07 Score=91.51 Aligned_cols=144 Identities=11% Similarity=0.128 Sum_probs=92.2
Q ss_pred cEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCC-CCcHHHHHHHHHHHHHh-----CCcEEEEcCChHHHHHHHHhcCC
Q 012452 113 DIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTG-RLNPETYRFFDEVEKHF-----GIRIEYMFPDAVEVQALVRSKGL 185 (463)
Q Consensus 113 ~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg-~~fpeT~~~~~~~~~~~-----gl~i~~~~p~~~~~~~~~~~~g~ 185 (463)
+++|++|||+||+++ +++.+.+.++..+|+|++ +.-++..+.+.++++.+ |++++++.-... ... +... .
T Consensus 189 kvlvalSGGvDS~vll~ll~~~G~~v~av~v~~~~~~~~~~~~~v~~~a~~l~~~~ggi~~~vv~~~~~-~~~-i~~~-~ 265 (413)
T 2c5s_A 189 KVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEV-QKT-INKE-I 265 (413)
T ss_dssp EEEEECCSSSHHHHHHHHHHHBTEEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHH-HHH-HHHH-S
T ss_pred eEEEEeCCCChHHHHHHHHHHcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEECcHH-HHH-HHhc-C
Confidence 589999999999766 888888878889999986 34467778888888888 898877743221 111 1211 1
Q ss_pred CCCCccchhhh--hhchhhhHHHHHHc--cCceEEEeeeccCCcc-cccCCCceecCCCCcCCcCCCCCeEEEEeCccCc
Q 012452 186 FSFYEDGHQEC--CRVRKVRPLRRALK--GLRAWITGQRKDQSPG-TRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVK 260 (463)
Q Consensus 186 ~~~~~~~~~~C--c~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~-~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt 260 (463)
+. ...| |......-+.+..+ +.+.+++|...+|-.. .+.++.. .+.. .+...+.||+.++
T Consensus 266 ---~~--~~~c~~~Rr~~~~~~~~~A~~~g~~~I~tG~~~dD~ae~~l~~l~~--~~~~--------~~~~virPL~~l~ 330 (413)
T 2c5s_A 266 ---PS--SYSMTVMRRMMMRITERIAEERNALAITTGESLGQVASQTLDSMHT--INEV--------TNYPVIRPLITMD 330 (413)
T ss_dssp ---CG--GGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTTSCCHHHHHH--HGGG--------CCSCEECTTTTCC
T ss_pred ---Cc--ccHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHhc--cccc--------CCCEEEeccCCCC
Confidence 11 1133 22222333333333 5568999998877531 1111110 1110 1345689999999
Q ss_pred HHHHHHHHHhCCCC
Q 012452 261 GNDIWNFLRTMDVP 274 (463)
Q Consensus 261 ~~DVw~yi~~~~lp 274 (463)
.+||.+|.++.|++
T Consensus 331 K~eI~~~a~~~Gl~ 344 (413)
T 2c5s_A 331 KLEIIKIAEEIGTY 344 (413)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999999983
No 250
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.38 E-value=5.6e-07 Score=85.61 Aligned_cols=86 Identities=16% Similarity=0.285 Sum_probs=63.5
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-----------------------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG----------------------------------- 414 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~----------------------------------- 414 (463)
..+.+|+.|+.+|||+|+.+.+.+.++.+. + +|.|..+++.-
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 356789999999999999999999887664 3 57777665410
Q ss_pred --------------CcHHHHHHcCCCCCCCEEEEEeC-CCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 415 --------------DQKEYAKQKLQLGSFPTILFFPK-HSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 415 --------------~~~~l~~~~~~I~~~PTi~~f~~-g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+.+++ ++++|.++||+++... |+ .....| ..+.++|.++|+++
T Consensus 173 ~~~~~~~~~~~~v~~~~~l~-~~~gv~gtPt~vi~~~~G~--~~~~~G-~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 173 VPANVSTEQMKVLSDNEKLM-DDLGANVTPAIYYMSKENT--LQQAVG-LPDQKTLNIIMGNK 231 (241)
T ss_dssp CCSSCCHHHHHHHHHHHHHH-HHHTCCSSCEEEEEETTTE--EEEEES-SCCHHHHHHHTTC-
T ss_pred ccccCCHHHHHHHHHHHHHH-HHcCCCCCCEEEEECCCCC--EEEecC-CCCHHHHHHHHHHH
Confidence 013456 7889999999999874 43 334455 68999999988764
No 251
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.31 E-value=1.5e-06 Score=81.63 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=79.3
Q ss_pred Ceeec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 352 NLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 352 ~V~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
.+++| +.+++++++. .++.+||-||++| |..+.+.|.++|+.+. .+.|+... + .+++ ++|+|.+ |
T Consensus 10 ~~~~l~s~~~~~~~l~---~~~v~vVgff~~~---~~~~~~~f~~~A~~l~--~~~F~~t~---~-~~v~-~~~~v~~-p 75 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIA---ATEVAVIGFFQDL---EIPAVPILHSMVQKFP--GVSFGIST---D-SEVL-THYNITG-N 75 (227)
T ss_dssp CCEECCSHHHHHHHHH---TSSEEEEEECSCS---CSTHHHHHHHHTTTCT--TSEEEEEC---C-HHHH-HHTTCCS-S
T ss_pred CCeeeCCHHHHHHHHh---cCCeEEEEEecCC---CchhHHHHHHHHHhCC--CceEEEEC---C-HHHH-HHcCCCC-C
Confidence 45566 6689999887 7899999999998 5678899999999994 58888743 4 7899 8999997 9
Q ss_pred EEEEEeCCCcCeeecCC---CCCCHHHHHHHHHH
Q 012452 431 TILFFPKHSSKPIKYPS---ERRDVDSLMAFVDA 461 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~ 461 (463)
+|++|++.......|.| |.++.+.|.+||+.
T Consensus 76 ~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~ 109 (227)
T 4f9z_D 76 TICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 109 (227)
T ss_dssp EEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHH
T ss_pred eEEEEEecCcccccccccccCCCCHHHHHHHHHH
Confidence 99999986544678875 36899999999975
No 252
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.28 E-value=1.6e-06 Score=76.96 Aligned_cols=89 Identities=12% Similarity=0.094 Sum_probs=64.4
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------~~~l~~~~~~I 426 (463)
.+++++|+|| +.||++|....|.|.++.++ . ++.++.|..|.. +.++. +.|++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 120 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFG-ENYGV 120 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHH-HHHTC
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHH-HHhCC
Confidence 4789999999 78999999999999998877 3 588888876532 13555 66777
Q ss_pred CC------CCEEEEEeCCCcCeee-c---CCCCCCHHHHHHHHHHh
Q 012452 427 GS------FPTILFFPKHSSKPIK-Y---PSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~------~PTi~~f~~g~~~~~~-y---~gg~~~~~~L~~fI~~l 462 (463)
.. .|++++++..+.+... + .....+.+++.+.|+++
T Consensus 121 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~l 166 (166)
T 3p7x_A 121 VMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI 166 (166)
T ss_dssp EETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHTC
T ss_pred ccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhcC
Confidence 64 8999999765543222 1 12245778888888764
No 253
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=98.28 E-value=6.4e-07 Score=92.33 Aligned_cols=163 Identities=15% Similarity=0.170 Sum_probs=95.5
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHHH----HHHhcCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQA----LVRSKGL 185 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl-~i~~~~p~~~~~~~----~~~~~g~ 185 (463)
++++|+||||.||+++ +++.+.+.++..+++|.|..-.+-.++++++++++|+ +++++.-. ..+.. .+.....
T Consensus 11 ~KVvVA~SGGlDSSvll~~L~e~G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~~-eef~~~v~p~i~~na~ 89 (455)
T 1k92_A 11 QRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCR-KQLVAEGIAAIQCGAF 89 (455)
T ss_dssp SEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECH-HHHHHHHHHHHHHTCC
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeCh-HHHHHHhHHHHHcCCc
Confidence 5699999999998765 8888778889999999996423456889999999999 77776432 22221 1222111
Q ss_pred CCCCc-cch--hhhhhch----hhhHHHHHHc--cCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEEEeC
Q 012452 186 FSFYE-DGH--QECCRVR----KVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPV 256 (463)
Q Consensus 186 ~~~~~-~~~--~~Cc~~~----Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI 256 (463)
|. .+. ..|+... ...-+.++.+ +.+.+++|.........|......... +++-.+.|+
T Consensus 90 ---y~~eg~rcY~l~t~~aRp~i~~~l~e~A~e~Gad~IAtGht~kgnDq~rf~~~~~al~----------p~l~viaPl 156 (455)
T 1k92_A 90 ---HNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTN----------AELQIYKPW 156 (455)
T ss_dssp ---CCEETTEECCCHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGG
T ss_pred ---ccccCceecccCCcchHHHHHHHHHHHHHHcCCCEEEECCcCCCCCHHHHHHHHHhcC----------CCCEEECee
Confidence 10 010 0111100 0111222222 567899998521000122211111111 245568899
Q ss_pred cc-------CcHHHHHHHHHhCCCCccchhccCCcccCc
Q 012452 257 AN-------VKGNDIWNFLRTMDVPINSLHSQGYISIGC 288 (463)
Q Consensus 257 ~d-------Wt~~DVw~yi~~~~lp~npLy~~Gy~siGC 288 (463)
.+ ++.+||..|.+++|||+.---++-|++--|
T Consensus 157 r~~~ll~~~lsK~EI~~yA~~~GIp~~~t~~~pyS~d~n 195 (455)
T 1k92_A 157 LDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSN 195 (455)
T ss_dssp GCHHHHHHSSSHHHHHHHHHHTTCCCCCCCCCSSEEEEE
T ss_pred ccccccccCCCHHHHHHHHHHcCCCcccCCCCCCccCCc
Confidence 88 699999999999999986433344444333
No 254
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=98.27 E-value=8.2e-07 Score=90.94 Aligned_cols=147 Identities=16% Similarity=0.228 Sum_probs=89.8
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCc-EEEEcCChHHHH-----HHHHhcC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDAVEVQ-----ALVRSKG 184 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~-i~~~~p~~~~~~-----~~~~~~g 184 (463)
.+++|++|||+||+++ +++.+.+.++..+++|.|.. +-.++++++++++|++ ++++.-. ..+. ..+....
T Consensus 6 ~kVvvalSGGlDSsvll~lL~e~G~eV~av~vd~g~~--~e~e~a~~~A~~lGi~~~~vvd~~-~ef~~~~~~~~i~~~a 82 (413)
T 2nz2_A 6 GSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQK--EDFEEARKKALKLGAKKVFIEDVS-REFVEEFIWPAIQSSA 82 (413)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHTTEEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECH-HHHHHHTHHHHHHTTC
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEECCcH--HHHHHHHHHHHHhCCCEEEEEeCh-HHHHHHHHHHHHHhCc
Confidence 4699999999998765 88877777788999999964 4478999999999997 6665332 1121 1112221
Q ss_pred CCCCCccchhhhhhchhh-----hHHHHHHc--cCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEEEeCc
Q 012452 185 LFSFYEDGHQECCRVRKV-----RPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVA 257 (463)
Q Consensus 185 ~~~~~~~~~~~Cc~~~Kv-----~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~ 257 (463)
. ++ ..+-|....- .-+.+..+ +.+++++|.........|..+...... +++-.+.|+.
T Consensus 83 ~---~e--~~y~~g~~~aRp~i~~~l~~~A~~~Ga~~IatGh~~~~nDq~rf~lg~~~l~----------p~l~ii~Pl~ 147 (413)
T 2nz2_A 83 L---YE--DRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLA----------PQIKVIAPWR 147 (413)
T ss_dssp C---BT--TTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGG
T ss_pred c---cc--cccccccccchHHHHHHHHHHHHHcCCCEEEECCcCcccchHHHHHHHHhcC----------CCCceecccc
Confidence 1 11 0011111111 11222222 667999999863221123211100011 2456789999
Q ss_pred ------cC-cHHHHHHHHHhCCCCcc
Q 012452 258 ------NV-KGNDIWNFLRTMDVPIN 276 (463)
Q Consensus 258 ------dW-t~~DVw~yi~~~~lp~n 276 (463)
+| +.+||..|.+++|||+.
T Consensus 148 d~~~ll~~~sK~EI~~yA~~~Gip~~ 173 (413)
T 2nz2_A 148 MPEFYNRFKGRNDLMEYAKQHGIPIP 173 (413)
T ss_dssp CHHHHTTCC-CHHHHHHHHHTTCCCC
T ss_pred chhhhccCCCHHHHHHHHHHcCCCee
Confidence 89 99999999999999985
No 255
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.26 E-value=1.1e-06 Score=78.13 Aligned_cols=73 Identities=11% Similarity=0.099 Sum_probs=55.7
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------~~~l~~~~~~I 426 (463)
.++++||+|| +.||++|....|.|.++.+++ . ++.|+.|..|.. +..++ +.|++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~-~~~gv 118 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S-NTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALH-SQLGV 118 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHH-HHTTC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHH-HHhCc
Confidence 4789999999 899999999999999999999 4 688888876521 14566 67877
Q ss_pred CC---------CCEEEEEeCCCcCeeec
Q 012452 427 GS---------FPTILFFPKHSSKPIKY 445 (463)
Q Consensus 427 ~~---------~PTi~~f~~g~~~~~~y 445 (463)
.. .|+++++++.+.+...+
T Consensus 119 ~~~~~~~~g~~~p~~~liD~~G~i~~~~ 146 (165)
T 1q98_A 119 DIQTGPLAGLTSRAVIVLDEQNNVLHSQ 146 (165)
T ss_dssp EECSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred eecccccCCccceeEEEEcCCCEEEEEE
Confidence 53 49999997655433333
No 256
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.25 E-value=1.2e-06 Score=84.01 Aligned_cols=92 Identities=11% Similarity=0.169 Sum_probs=70.2
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++++||+|| +.||++|....|.|.++.++|++.++.|+.|.+|.. +.+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va- 168 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS- 168 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHH-
Confidence 4789999999 999999999999999999999876799999987642 13456
Q ss_pred HcCCCC------CCCEEEEEeCCCcCeeecC---CCCCCHHHHHHHHHHh
Q 012452 422 QKLQLG------SFPTILFFPKHSSKPIKYP---SERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~------~~PTi~~f~~g~~~~~~y~---gg~~~~~~L~~fI~~l 462 (463)
+.|++. .+|++++++..+.+...+. ...++.+++.+.|+++
T Consensus 169 ~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 169 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHhh
Confidence 667774 5799999976554322221 1246788999888876
No 257
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.22 E-value=2.9e-06 Score=80.27 Aligned_cols=90 Identities=13% Similarity=0.248 Sum_probs=65.3
Q ss_pred CCCcEEEEEe-cCCChhHH-HhHHHHHHHHHHhcCCCe-EEEEEEcCCC---------------------cHHHHHHcCC
Q 012452 370 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGV-KVGKFRADGD---------------------QKEYAKQKLQ 425 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~-~~~p~l~~la~~~~~~~v-~f~~VD~d~~---------------------~~~l~~~~~~ 425 (463)
.++++||+|| ++||++|. ...|.|.++++++++.++ .|+.|+.|.. +.+++ +.|+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~g 110 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFT-EGMG 110 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHH-HHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHH-HHhC
Confidence 4789999999 99999999 999999999999976679 8999987642 13466 6778
Q ss_pred CC-----------CCCEEEEEeCCCcCeeecCCC--C------CCHHHHHHHHHH
Q 012452 426 LG-----------SFPTILFFPKHSSKPIKYPSE--R------RDVDSLMAFVDA 461 (463)
Q Consensus 426 I~-----------~~PTi~~f~~g~~~~~~y~gg--~------~~~~~L~~fI~~ 461 (463)
+. ..|+.+++++|+. ...+.+. . .+.+++.+.|+.
T Consensus 111 v~~~~~~~g~~~~~~p~t~li~~G~i-~~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 111 MLVGKEDLGFGKRSWRYSMLVKNGVV-EKMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp CEEECTTTTCCEEECCEEEEEETTEE-EEEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred ceeecccccCcccceeEEEEEECCEE-EEEEEeccCCCccceecCHHHHHHHhhh
Confidence 75 3587777766653 2222221 1 467888777653
No 258
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.21 E-value=8.9e-06 Score=72.82 Aligned_cols=92 Identities=16% Similarity=0.303 Sum_probs=62.7
Q ss_pred CCCcEEEEEecCCCh-hHHHhHHHHHHHHHHhcC--CCeEEEEEEcCCC--cH----HHHHHcCC---------------
Q 012452 370 RQEPWLVVLYAPWCQ-FCQAMEGSYVELADKLAG--NGVKVGKFRADGD--QK----EYAKQKLQ--------------- 425 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~-~C~~~~p~l~~la~~~~~--~~v~f~~VD~d~~--~~----~l~~~~~~--------------- 425 (463)
+++++||+||++||+ .|....+.+.++.+.++. .++.++.|.+|.. .+ +++ ++|+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~-~~~~~~~~~~~~ltg~~~~ 109 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFI-QKFTEDTSNWNLLTGYSLE 109 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHH-TTTCSCCTTEEEEBCSCHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHH-HHcCCCCCCceecCcccHH
Confidence 689999999999997 799999999998888753 3688888877632 11 122 2222
Q ss_pred ---------------------CCCCCEEEEEeCCCcCeeecCC-CCCCHHHHHHHHHHh
Q 012452 426 ---------------------LGSFPTILFFPKHSSKPIKYPS-ERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 ---------------------I~~~PTi~~f~~g~~~~~~y~g-g~~~~~~L~~fI~~l 462 (463)
+...|++++++..+.....|.| ...+.++|.+-|+.|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~L 168 (170)
T 4hde_A 110 DITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRL 168 (170)
T ss_dssp HHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHH
Confidence 2234788888665543444544 235678888877765
No 259
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.21 E-value=7.5e-06 Score=76.91 Aligned_cols=89 Identities=19% Similarity=0.221 Sum_probs=66.6
Q ss_pred cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC------------------------------cHHHHHH
Q 012452 373 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD------------------------------QKEYAKQ 422 (463)
Q Consensus 373 ~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~------------------------------~~~l~~~ 422 (463)
.+|++|+++||++|....+.|.+++++|++.++.++.|.+|.. +.+++ +
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va-~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELA-I 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHH-H
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHH-H
Confidence 5666778999999999999999999999876899999987642 13455 6
Q ss_pred cCCCC------------CCCEEEEEeCCCcCeeecCC---CCCCHHHHHHHHHHh
Q 012452 423 KLQLG------------SFPTILFFPKHSSKPIKYPS---ERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~------------~~PTi~~f~~g~~~~~~y~g---g~~~~~~L~~fI~~l 462 (463)
.|++. .+|++++++..+.+...+.+ ..++.++|.+.|++|
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 67763 37999999766653332221 136899999999876
No 260
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.21 E-value=9.1e-07 Score=72.36 Aligned_cols=69 Identities=14% Similarity=0.166 Sum_probs=47.6
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHcCCCCCCCEE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPTI 432 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~------~~l~~~~~~I~~~PTi 432 (463)
+.+++++. .. .++.|+++||++|+.+.+.|+++...+++ |..+|++.+. ..+. +.+++.++|++
T Consensus 3 ~~~~~~i~---~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~~----~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~i 72 (105)
T 1kte_A 3 AFVNSKIQ---PG--KVVVFIKPTCPFCRKTQELLSQLPFKEGL----LEFVDITATSDTNEIQDYLQ-QLTGARTVPRV 72 (105)
T ss_dssp HHHHHHCC---TT--CEEEEECSSCHHHHHHHHHHHHSCBCTTS----EEEEEGGGSTTHHHHHHHHH-HHHSCCCSCEE
T ss_pred hHHHhhcc---cC--CEEEEEcCCCHhHHHHHHHHHHcCCCCCc----cEEEEccCCCCHHHHHHHHH-HHhCCCCcCeE
Confidence 34555553 22 36779999999999999999886544322 5556666541 2466 78999999997
Q ss_pred EEEeCCC
Q 012452 433 LFFPKHS 439 (463)
Q Consensus 433 ~~f~~g~ 439 (463)
+ .+|+
T Consensus 73 ~--~~g~ 77 (105)
T 1kte_A 73 F--IGKE 77 (105)
T ss_dssp E--ETTE
T ss_pred E--ECCE
Confidence 3 4665
No 261
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.20 E-value=3e-06 Score=77.21 Aligned_cols=91 Identities=11% Similarity=0.204 Sum_probs=60.8
Q ss_pred CCCc-EEEEEecCCChhHHH-hHHHHHHHHHHhcCCCeE-EEEEEcCCC----------------------cHHHHHHcC
Q 012452 370 RQEP-WLVVLYAPWCQFCQA-MEGSYVELADKLAGNGVK-VGKFRADGD----------------------QKEYAKQKL 424 (463)
Q Consensus 370 ~~k~-vlV~FyA~wC~~C~~-~~p~l~~la~~~~~~~v~-f~~VD~d~~----------------------~~~l~~~~~ 424 (463)
++++ +|++||++||++|+. ..|.|.+++++|++.++. ++.|+.|.. +.+++ +.|
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 133 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFT-KAI 133 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHH-HHT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHH-HHc
Confidence 3554 555566999999999 799999999999876788 999987642 13466 677
Q ss_pred CCC-----------CCCEEEEEeCCCcCeeecC--CCCCCHHHHHHHHHH
Q 012452 425 QLG-----------SFPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDA 461 (463)
Q Consensus 425 ~I~-----------~~PTi~~f~~g~~~~~~y~--gg~~~~~~L~~fI~~ 461 (463)
++. ..|+.+++++|+....... .+..+..++.+.|++
T Consensus 134 Gv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 134 GMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp TCEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred CCceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 775 3577777786653222211 123445555555554
No 262
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.20 E-value=3.6e-06 Score=75.00 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=64.5
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc--HHHHH------------------HcCCCC-
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--KEYAK------------------QKLQLG- 427 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~--~~l~~------------------~~~~I~- 427 (463)
.++++||+|| ++||++|....|.+.++.+++ . ++.|+.|.+|... .++++ +.|++.
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 123 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-E-GVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDMEKYGVLI 123 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T-TEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGGGGGTCBB
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C-CceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcHHHhCCEe
Confidence 4789999999 899999999999999999988 4 7999999876431 11220 233432
Q ss_pred --------CCCEEEEEeCCCcCeeecCC----CCCCHHHHHHHHHHh
Q 012452 428 --------SFPTILFFPKHSSKPIKYPS----ERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 --------~~PTi~~f~~g~~~~~~y~g----g~~~~~~L~~fI~~l 462 (463)
..|+++++++.+.+...+.+ ...+.++|.+.|++|
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred cccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 15899999755544333322 245678899888875
No 263
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.18 E-value=2.8e-06 Score=75.26 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=54.3
Q ss_pred CCCcEEEEEe-cCCChhHH-HhHHHHHHHHHHhcCCCeE-EEEEEcCCC----------------------cHHHHHHcC
Q 012452 370 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKLAGNGVK-VGKFRADGD----------------------QKEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~-~~~p~l~~la~~~~~~~v~-f~~VD~d~~----------------------~~~l~~~~~ 424 (463)
+++++||+|| ++||++|. ...|.|.++.+++++.++. ++.|..|.. +.+++ +.|
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~ 112 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYT-HAL 112 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHH-HHc
Confidence 4789999999 89999999 8999999999999755688 888876531 13566 677
Q ss_pred CCC-----------CCCEEEEEeCCC
Q 012452 425 QLG-----------SFPTILFFPKHS 439 (463)
Q Consensus 425 ~I~-----------~~PTi~~f~~g~ 439 (463)
++. ..|+++++++|+
T Consensus 113 gv~~~~~~~g~~~~~~p~~~vid~G~ 138 (162)
T 1tp9_A 113 GLELDLQEKGLGTRSRRFALLVDDLK 138 (162)
T ss_dssp TCEEEETTTTSEEEECCEEEEEETTE
T ss_pred CcccccccCCCCccceeEEEEEECCE
Confidence 775 279988888444
No 264
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.18 E-value=3.1e-06 Score=76.30 Aligned_cols=92 Identities=12% Similarity=0.132 Sum_probs=60.9
Q ss_pred CCCcEEEEE-ecCCChhHH-HhHHHHHHHHHHhcCCCeEEEE-EEcCCC----------------------cHHHHHHcC
Q 012452 370 RQEPWLVVL-YAPWCQFCQ-AMEGSYVELADKLAGNGVKVGK-FRADGD----------------------QKEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~F-yA~wC~~C~-~~~p~l~~la~~~~~~~v~f~~-VD~d~~----------------------~~~l~~~~~ 424 (463)
.+++++|+| |++||++|. ...|.|.+++++|++.++.++. |..|.. +.+++ +.|
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va-~~y 120 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFG-KET 120 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHH-HHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHH-HHh
Confidence 456555555 599999999 5899999999999876787775 766531 13566 677
Q ss_pred CCC-------------CCCEEEEEeCCCcCeeecC--CCCCCHHHHHHHHHHh
Q 012452 425 QLG-------------SFPTILFFPKHSSKPIKYP--SERRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~-------------~~PTi~~f~~g~~~~~~y~--gg~~~~~~L~~fI~~l 462 (463)
++. ..|+.+++++|........ +..++..+..+.|+.|
T Consensus 121 Gv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~~l 173 (173)
T 3mng_A 121 DLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 173 (173)
T ss_dssp TCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHHHC
T ss_pred CCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHHhC
Confidence 775 3599999985543211111 1136666666666653
No 265
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.14 E-value=2.7e-06 Score=78.40 Aligned_cols=68 Identities=12% Similarity=0.169 Sum_probs=53.8
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHHHcCCC
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAKQKLQL 426 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------~~~l~~~~~~I 426 (463)
.+++++|+|| +.||++|....|.|.++.++| . ++.|+.|.+|.. +.++. +.|++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~-~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~-~~ygv 153 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E-NTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFK-QAYGV 153 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T-TEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHH-HHTTC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C-CCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHH-HHhCc
Confidence 5789999999 789999999999999999999 3 699998886532 13556 67777
Q ss_pred C---------CCCEEEEEeCCCc
Q 012452 427 G---------SFPTILFFPKHSS 440 (463)
Q Consensus 427 ~---------~~PTi~~f~~g~~ 440 (463)
. ..|++++++..+.
T Consensus 154 ~~~~~~~~g~~~p~~~lID~~G~ 176 (200)
T 3zrd_A 154 AITEGPLAGLTARAVVVLDGQDN 176 (200)
T ss_dssp EECSSTTTTSBCCEEEEECTTSB
T ss_pred eeecccCCCccccEEEEECCCCe
Confidence 5 3699999976554
No 266
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.12 E-value=1.8e-06 Score=72.07 Aligned_cols=58 Identities=14% Similarity=0.214 Sum_probs=44.7
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeE---EEEEEcCCCc------HHHHHHcCCCCCCCEEEEEeCCC
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVK---VGKFRADGDQ------KEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~---f~~VD~d~~~------~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
...++.|+++||++|+.+.+.|+++. +. |..+|++.+. .++. +.+++.++|++++ +|+
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~-------~~~~~~~~vdi~~~~~~~~~~~~l~-~~~g~~~vP~v~i--~g~ 84 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFS-------FKRGAYEIVDIKEFKPENELRDYFE-QITGGKTVPRIFF--GKT 84 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSC-------BCTTSEEEEEGGGSSSHHHHHHHHH-HHHSCCSSCEEEE--TTE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcC-------CCcCceEEEEccCCCChHHHHHHHH-HHhCCCCcCEEEE--CCE
Confidence 34577899999999999999887643 44 7888888761 2677 7899999999743 565
No 267
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.11 E-value=2.9e-05 Score=77.50 Aligned_cols=109 Identities=9% Similarity=0.044 Sum_probs=84.5
Q ss_pred CCeeecChhhHHHHHhhcCC-CCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHH---HcCC
Q 012452 351 QNLVTLNRTGMENLARLDHR-QEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAK---QKLQ 425 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~-~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~~~~l~~---~~~~ 425 (463)
+.|.+++.+++..+.. +. ++..++.|+.+||+.|..+.+.|+++|+++.+ .++.|+.+|++.. +.++. +.|+
T Consensus 226 p~v~elt~~~~~~~~~--~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~-~~~~~~~~~~~g 302 (350)
T 1sji_A 226 PTLRRLRPEDMFETWE--DDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDF-PLLVAYWEKTFK 302 (350)
T ss_dssp CSEEECCTTTHHHHHH--SCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGC-HHHHHHHHHHCC
T ss_pred cchhhcChhhHHHHhc--CCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhh-HHHHHHHHhhcC
Confidence 4699999999998765 12 24456669999999999999999999999973 5699999999988 66551 4688
Q ss_pred CC-CCCEEEEEeCCCcCeee--cCC--CCCCHHHHHHHHHHh
Q 012452 426 LG-SFPTILFFPKHSSKPIK--YPS--ERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 I~-~~PTi~~f~~g~~~~~~--y~g--g~~~~~~L~~fI~~l 462 (463)
+. .+|+++++...+..... +.+ +..+.++|.+||+.+
T Consensus 303 i~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 303 IDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp SCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred CCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 87 58999999763321233 221 368999999999875
No 268
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.10 E-value=8.5e-06 Score=77.07 Aligned_cols=90 Identities=16% Similarity=0.262 Sum_probs=67.5
Q ss_pred CcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------------cHHHHHH
Q 012452 372 EPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----------------------------QKEYAKQ 422 (463)
Q Consensus 372 k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------------~~~l~~~ 422 (463)
+.+||+|| ++||++|....+.|.++.++|+..++.++.|.+|.. +.+++ +
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va-~ 108 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELA-V 108 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHH-H
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHH-H
Confidence 48889998 999999999999999999999766799999887642 02455 5
Q ss_pred cCCCC------------CCCEEEEEeCCCcCeeec--C-CCCCCHHHHHHHHHHh
Q 012452 423 KLQLG------------SFPTILFFPKHSSKPIKY--P-SERRDVDSLMAFVDAL 462 (463)
Q Consensus 423 ~~~I~------------~~PTi~~f~~g~~~~~~y--~-gg~~~~~~L~~fI~~l 462 (463)
.|++. .+|++++++..+.+...+ . ...++.++|.+.|++|
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 67764 579999997665432222 1 1136899999999876
No 269
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=98.09 E-value=1.3e-05 Score=85.29 Aligned_cols=164 Identities=14% Similarity=0.186 Sum_probs=95.4
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-CCCeEEEEEeCCCC-cHHHHHHHHHHHHHh-CCcEEEEcCChHHHHHHHHhcCCCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRL-NPETYRFFDEVEKHF-GIRIEYMFPDAVEVQALVRSKGLFS 187 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~-~~~i~vi~~DTg~~-fpeT~~~~~~~~~~~-gl~i~~~~p~~~~~~~~~~~~g~~~ 187 (463)
+++++++|||.||+++ .|+++. +.++..+|+|+|.. ..|..+.++.+++++ |++++++.-.. .+... ..|..
T Consensus 256 ~~vvvalSGGvDSsv~a~ll~~~~G~~v~~v~vd~g~~~~~e~~~~~~~~~~~l~gi~~~~vd~~~-~f~~~--l~g~~- 331 (556)
T 3uow_A 256 HYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFPDMNITKIDASE-NFLSN--LQGVT- 331 (556)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHHHHCTTSEEEEEECHH-HHHHH--TTTCC-
T ss_pred ceEEEEcccCCCHHHHHHHHHHHhCCeEEEEEEecCCCChHHHHHHHHHHHHhcCCCCeEEeccHH-HHHHh--hcCCC-
Confidence 5799999999998766 777664 77899999999975 447777778899999 99998874332 12221 22321
Q ss_pred CCccchhhhhhchhhhHHHHHHcc---C---ceEEEeeeccCCcccccC---CCceecCCCCcCCcCCCCCeEEEEeCcc
Q 012452 188 FYEDGHQECCRVRKVRPLRRALKG---L---RAWITGQRKDQSPGTRSE---IPVVQVDPVFEGLEGGVGSLVKWNPVAN 258 (463)
Q Consensus 188 ~~~~~~~~Cc~~~Kv~Pl~r~l~~---~---~~~itG~Rr~ES~~~Ra~---~~~~~~d~~~~~~~~~~~~~~k~~PI~d 258 (463)
-++.....|+. ..+.-+.+..+. . +.+.+|+-.++-...+.. ...+.......+.. ....+..+.||.+
T Consensus 332 ~pe~kr~iig~-~f~~vf~~~A~~~~~~~~~~~la~Gt~y~D~ies~~~~g~~~~iks~~n~~gl~-~~~~~~li~PL~~ 409 (556)
T 3uow_A 332 DPEQKRKIIGK-LFIEEFEKAVNNIDIDINKTFLLQGTLYPDIIESKCSKNLSDTIKTHHNVGGLP-KNLKFKLFEPFKY 409 (556)
T ss_dssp CHHHHHHHHHH-HHHHHHHHHHHTTCCCGGGEEEECCCCHHHHHHHSCC--------------------CCCEEECTTTT
T ss_pred ChHHHHHHHHH-HHHHHHHHHHHHcCCcccccccccCccChHHHhhcccccccceecccccccccc-cccccceEeeccc
Confidence 11111222222 223333443332 2 467778643332111110 00000000000000 0013457899999
Q ss_pred CcHHHHHHHHHhCCCCccchhcc
Q 012452 259 VKGNDIWNFLRTMDVPINSLHSQ 281 (463)
Q Consensus 259 Wt~~DVw~yi~~~~lp~npLy~~ 281 (463)
++.+||..|-++.|||+.-.+.+
T Consensus 410 l~K~EVr~la~~lGlp~~~~~r~ 432 (556)
T 3uow_A 410 LFKDDVKTLSRELNLPEEITNRH 432 (556)
T ss_dssp CCHHHHHHHHHTTTCCHHHHHCC
T ss_pred CcHHHHHHHHHHcCCCHHHhCCC
Confidence 99999999999999998777766
No 270
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.04 E-value=6.7e-06 Score=77.03 Aligned_cols=89 Identities=13% Similarity=0.265 Sum_probs=66.0
Q ss_pred cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHHHcCC
Q 012452 373 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAKQKLQ 425 (463)
Q Consensus 373 ~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~~~~~ 425 (463)
.+|++||++||++|....+.|.++.++|++.++.++.|.+|.. +.+++ +.|+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va-~~yg 112 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELA-NKLK 112 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHH-HHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHH-HHhC
Confidence 5555568999999999999999999999876899999987642 13456 6677
Q ss_pred CC------------CCCEEEEEeCCCcCeeec--C-CCCCCHHHHHHHHHHh
Q 012452 426 LG------------SFPTILFFPKHSSKPIKY--P-SERRDVDSLMAFVDAL 462 (463)
Q Consensus 426 I~------------~~PTi~~f~~g~~~~~~y--~-gg~~~~~~L~~fI~~l 462 (463)
+. .+|++++++..+.+...+ . ...++.++|.+.|++|
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 73 479999997665532222 1 1137899999999876
No 271
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.04 E-value=6.7e-06 Score=65.12 Aligned_cols=55 Identities=22% Similarity=0.373 Sum_probs=43.6
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC--CCcHHHHHHcC-CCCCCCEEEEEeCCC
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD--GDQKEYAKQKL-QLGSFPTILFFPKHS 439 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d--~~~~~l~~~~~-~I~~~PTi~~f~~g~ 439 (463)
-++.|+++||++|+.+.+.|++. ++.|..+|++ .. .++. +.+ ++.++|+++ .+|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~-------~i~~~~vdv~~~~~-~~l~-~~~~~~~~vP~l~--~~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK-------GVKYTDIDASTSLR-QEMV-QRANGRNTFPQIF--IGDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH-------TCCEEEECSCHHHH-HHHH-HHHHSSCCSCEEE--ETTE
T ss_pred eEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCHHHH-HHHH-HHhCCCCCcCEEE--ECCE
Confidence 47789999999999999988875 3667788887 33 5677 778 999999984 3554
No 272
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.00 E-value=4.6e-06 Score=74.81 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=37.4
Q ss_pred CcEEEEEecCCChhHHHh-HHHHHHHHHHhcCCCeE-EEEEEcCC
Q 012452 372 EPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVK-VGKFRADG 414 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~-~p~l~~la~~~~~~~v~-f~~VD~d~ 414 (463)
+.+|++||++||++|+.. .|.|.++.+++++.++. |+.|+.+.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~ 89 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAIND 89 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSC
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 577888999999999998 99999999999765788 88888764
No 273
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.00 E-value=8.5e-06 Score=72.84 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=38.6
Q ss_pred CCCcEEEEEe-cCCChhHHH-hHHHHHHHHHHhcCCCe-EEEEEEcCC
Q 012452 370 RQEPWLVVLY-APWCQFCQA-MEGSYVELADKLAGNGV-KVGKFRADG 414 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~-~~p~l~~la~~~~~~~v-~f~~VD~d~ 414 (463)
+++++||+|| ++||++|.. ..|.|.++.+++++.++ .++.|+.|.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 4677888886 999999999 99999999999976679 999998753
No 274
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.99 E-value=2.2e-06 Score=79.02 Aligned_cols=44 Identities=23% Similarity=0.464 Sum_probs=40.8
Q ss_pred CCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcCCC
Q 012452 371 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGD 415 (463)
Q Consensus 371 ~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d~~ 415 (463)
++++||.||+.||+||+.+.|.| +++++.+++ ++.|.+++++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~~~ 159 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVNFM 159 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECSSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccCcC
Confidence 57899999999999999999999 999999987 799999999876
No 275
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.99 E-value=2.2e-05 Score=71.33 Aligned_cols=42 Identities=10% Similarity=0.267 Sum_probs=36.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 412 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~ 412 (463)
.++++|+.||.+|||+|..+.|.+.++.+++++ ++.|..+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEecc
Confidence 467899999999999999999999999999876 677776664
No 276
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.96 E-value=1e-05 Score=69.33 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=47.4
Q ss_pred hhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--cH----HHHHHcCCCCCCCE
Q 012452 358 RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPT 431 (463)
Q Consensus 358 ~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--~~----~l~~~~~~I~~~PT 431 (463)
.+.+++++. .+ .+ +.|+++||++|+.+.+.|+++. +.|..+|++.+ ++ ++. +.+++.++|+
T Consensus 17 ~~~~~~~i~---~~-~v-vvf~~~~Cp~C~~~~~~L~~~~-------i~~~~vdid~~~~~~~~~~~l~-~~~g~~~vP~ 83 (130)
T 2cq9_A 17 VNQIQETIS---DN-CV-VIFSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPR 83 (130)
T ss_dssp HHHHHHHHH---HS-SE-EEEECSSCSHHHHHHHHHHHHT-------CCCEEEETTTSTTHHHHHHHHH-HHHSSCCSSE
T ss_pred HHHHHHHHc---CC-cE-EEEEcCCChHHHHHHHHHHHcC-------CCcEEEECcCCcCcHHHHHHHH-HHhCCCCcCE
Confidence 455666664 33 34 4499999999999999998762 45566777654 12 366 7899999999
Q ss_pred EEEEeCCC
Q 012452 432 ILFFPKHS 439 (463)
Q Consensus 432 i~~f~~g~ 439 (463)
++ .+|+
T Consensus 84 l~--i~G~ 89 (130)
T 2cq9_A 84 IF--VNGT 89 (130)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 84 3665
No 277
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.94 E-value=1.8e-05 Score=64.88 Aligned_cols=65 Identities=15% Similarity=0.264 Sum_probs=47.5
Q ss_pred hhHHHHHhhcCCCCcEEEEEec-----CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHH----HHHcCCCCCC
Q 012452 359 TGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEY----AKQKLQLGSF 429 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA-----~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l----~~~~~~I~~~ 429 (463)
+.+++++. .+ .++| |++ +||++|+.+.+.|.++ ++.|..+|++.+ +++ . ..+++.++
T Consensus 8 ~~~~~~i~---~~-~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~~~-~~~~~~l~-~~~g~~~v 73 (105)
T 2yan_A 8 ERLKVLTN---KA-SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLK-AYSNWPTY 73 (105)
T ss_dssp HHHHHHHT---SS-SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGGGC-HHHHHHHH-HHHTCCSS
T ss_pred HHHHHHhc---cC-CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECCCC-HHHHHHHH-HHHCCCCC
Confidence 44555553 33 4554 776 9999999999999876 377889999987 553 4 45789999
Q ss_pred CEEEEEeCCC
Q 012452 430 PTILFFPKHS 439 (463)
Q Consensus 430 PTi~~f~~g~ 439 (463)
|+++ .+|+
T Consensus 74 P~v~--i~g~ 81 (105)
T 2yan_A 74 PQLY--VKGE 81 (105)
T ss_dssp CEEE--ETTE
T ss_pred CeEE--ECCE
Confidence 9983 4665
No 278
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.93 E-value=2.2e-05 Score=63.16 Aligned_cols=73 Identities=15% Similarity=0.316 Sum_probs=53.8
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHc-----CCCCCCCEEEEEeCCCcCeeecCCC
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQK-----LQLGSFPTILFFPKHSSKPIKYPSE 448 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~-----~~I~~~PTi~~f~~g~~~~~~y~gg 448 (463)
-|+.|..+|||+|+..+..|++. ++.|-.+|++.+ ++.. +. .+.+++|+|+ +.+|. ...
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-------gi~y~~idi~~d-~~~~-~~~~~~~~G~~tVP~I~-i~Dg~--~l~---- 68 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-------RIAYDEVDIEHN-RAAA-EFVGSVNGGNRTVPTVK-FADGS--TLT---- 68 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-------TCCCEEEETTTC-HHHH-HHHHHHSSSSSCSCEEE-ETTSC--EEE----
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-------CCceEEEEcCCC-HHHH-HHHHHHcCCCCEeCEEE-EeCCE--EEe----
Confidence 46779999999999988877652 588999999988 5543 22 2678899975 56665 221
Q ss_pred CCCHHHHHHHHHHh
Q 012452 449 RRDVDSLMAFVDAL 462 (463)
Q Consensus 449 ~~~~~~L~~fI~~l 462 (463)
..+.++|.++|.++
T Consensus 69 ~~~~~el~~~L~el 82 (92)
T 2lqo_A 69 NPSADEVKAKLVKI 82 (92)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 25778898888765
No 279
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.93 E-value=1.8e-05 Score=64.53 Aligned_cols=60 Identities=22% Similarity=0.340 Sum_probs=45.6
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---HcC-CCCCCCEEEEEeCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKL-QLGSFPTILFFPKHS 439 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~---~~~-~I~~~PTi~~f~~g~ 439 (463)
....-++.|+++||++|+..++.|+++ ++.|..+|++.+ ++... +.. +..++|++ |.+|+
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~-------~i~y~~idI~~~-~~~~~~l~~~~~g~~~vP~i--fi~g~ 76 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRK-------GVEFQEYCIDGD-NEAREAMAARANGKRSLPQI--FIDDQ 76 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHH-------TCCCEEEECTTC-HHHHHHHHHHTTTCCCSCEE--EETTE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHC-------CCCCEEEEcCCC-HHHHHHHHHHhCCCCCCCEE--EECCE
Confidence 455667789999999999999999875 367788899887 55440 333 88999988 44665
No 280
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.92 E-value=5.3e-05 Score=76.31 Aligned_cols=110 Identities=11% Similarity=0.064 Sum_probs=85.0
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCC-CeEEEEEEcCCCcHHHH---HHcCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGN-GVKVGKFRADGDQKEYA---KQKLQL 426 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~-~v~f~~VD~d~~~~~l~---~~~~~I 426 (463)
+.|.+++.+++..+.. ....++.+|.|+.++|+.|..+.+.|+++|+++++. ++.|+.+|++.. .... .+.|++
T Consensus 228 p~v~elt~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~-~~~l~~~~~~fgl 305 (367)
T 3us3_A 228 STLRKLKPESMYETWE-DDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF-PLLVPYWEKTFDI 305 (367)
T ss_dssp CSEEECCGGGHHHHHH-SCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC-TTTHHHHHHHHTC
T ss_pred cceeecChhhHHHHHh-hccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc-hhHHHHHHHhcCC
Confidence 4689999999887764 112456778899999999999999999999999984 699999999987 4332 145888
Q ss_pred C-CCCEEEEEeCCCcC--eeecCC--CCCCHHHHHHHHHHh
Q 012452 427 G-SFPTILFFPKHSSK--PIKYPS--ERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~-~~PTi~~f~~g~~~--~~~y~g--g~~~~~~L~~fI~~l 462 (463)
. .+|+++++...+.. ...+.+ +..+.++|.+|++.+
T Consensus 306 ~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 306 DLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp CTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred CCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 7 89999999865431 233343 368999999999875
No 281
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=97.92 E-value=2.3e-05 Score=79.85 Aligned_cols=148 Identities=16% Similarity=0.239 Sum_probs=88.4
Q ss_pred HcCCcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHHHH-----HH
Q 012452 109 KFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQAL-----VR 181 (463)
Q Consensus 109 ~~~~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl-~i~~~~p~~~~~~~~-----~~ 181 (463)
+...+++|+||||-||+++ .++.+.+.++..+++|.|.. +=++.++++++++|+ +++++.-. ..+... +.
T Consensus 12 ~~~~KVVVA~SGGlDSSv~a~~Lke~G~eViavt~d~Gq~--~Ele~A~~vA~~lGi~~~~VvDl~-eef~~~v~~p~i~ 88 (421)
T 1vl2_A 12 HMKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK--DDFVAIKEKALKTGASKVYVEDLR-REFVTDYIFTALL 88 (421)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECH-HHHHHHTHHHHHT
T ss_pred cccCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEEEcCCH--HHHHHHHHHHHHcCCceEEEEecH-HHHHHhhhhHHHh
Confidence 4456799999999998655 77877888899999999963 346789999999999 77766332 223211 11
Q ss_pred hcCCCCCCcc----c---hhhhhhchhhhHHHHHHc--cCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEE
Q 012452 182 SKGLFSFYED----G---HQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVK 252 (463)
Q Consensus 182 ~~g~~~~~~~----~---~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k 252 (463)
.+. +++. . .+-|+ . .-+.++.+ |.+.+++|.-.......|........+ +.+--
T Consensus 89 ~na---~yeg~Y~~g~~l~Rp~i-~---~~l~~~A~~~Gad~IA~G~~~kgnDq~rf~~~~~al~----------p~~~I 151 (421)
T 1vl2_A 89 GNA---MYEGRYLLGTAIARPLI-A---KRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALN----------PNLKV 151 (421)
T ss_dssp TTC---CBTTTBCCHHHHHHHHH-H---HHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTSEE
T ss_pred cCC---cccCceeCCCcccHHHH-H---HHHHHHHHHcCCCEEEECCeeCCCChHHHHHHHHhcC----------CCCeE
Confidence 111 1111 0 12222 1 11222222 677999998752111012111111112 23446
Q ss_pred EEeCcc-------CcHHHHHHHHHhCCCCcc
Q 012452 253 WNPVAN-------VKGNDIWNFLRTMDVPIN 276 (463)
Q Consensus 253 ~~PI~d-------Wt~~DVw~yi~~~~lp~n 276 (463)
+.|+.+ ++.+||.+|.+++|||+.
T Consensus 152 iaPl~d~~~l~~~lsK~Eir~~A~e~Glp~~ 182 (421)
T 1vl2_A 152 ISPWKDPEFLAKFKGRTDLINYAMEKGIPIK 182 (421)
T ss_dssp ECGGGCHHHHHHTC--CHHHHHHHHHTCCCC
T ss_pred EcccCchhhccccCCHHHHHHHHHHcCCCcc
Confidence 789999 599999999999999985
No 282
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.92 E-value=7e-06 Score=69.11 Aligned_cols=69 Identities=14% Similarity=0.246 Sum_probs=49.0
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHh-HHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHcCCCCCCCE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFPT 431 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~-~p~l~~la~~~~~~~v~f~~VD~d~~~------~~l~~~~~~I~~~PT 431 (463)
+.+++++. .. .++.|+++||++|+.+ .+.|+++.. ..+.|..+|++.+. .++. +.+++.++|+
T Consensus 16 ~~~~~~i~---~~--~Vvvf~~~~Cp~C~~alk~~L~~~~~----~~i~~~~vdid~~~~~~~~~~~l~-~~~g~~tvP~ 85 (118)
T 3c1r_A 16 KHVKDLIA---EN--EIFVASKTYCPYCHAALNTLFEKLKV----PRSKVLVLQLNDMKEGADIQAALY-EINGQRTVPN 85 (118)
T ss_dssp HHHHHHHH---HS--SEEEEECSSCHHHHHHHHHHHTTSCC----CGGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHc---cC--cEEEEEcCCCcCHHHHHHHHHHHcCC----CCCCeEEEECccCCChHHHHHHHH-HHhCCCCcCE
Confidence 45566554 22 3666999999999998 877765431 13788888988762 2466 7899999998
Q ss_pred EEEEeCCC
Q 012452 432 ILFFPKHS 439 (463)
Q Consensus 432 i~~f~~g~ 439 (463)
+ |.+|+
T Consensus 86 v--fi~g~ 91 (118)
T 3c1r_A 86 I--YINGK 91 (118)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 7 45666
No 283
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.91 E-value=1.4e-05 Score=70.04 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=47.3
Q ss_pred hhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--cH----HHHHHcCCCCCCCE
Q 012452 358 RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPT 431 (463)
Q Consensus 358 ~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--~~----~l~~~~~~I~~~PT 431 (463)
.+.+++++. .+ .+ +.|+++||++|+.+.+.|+++. +.|..+|++.+ ++ ++. +.+++.++|+
T Consensus 39 ~~~~~~~i~---~~-~V-vvf~~~~Cp~C~~~k~~L~~~~-------i~~~~vdId~~~~~~~~~~~L~-~~~g~~tvP~ 105 (146)
T 2ht9_A 39 VNQIQETIS---DN-CV-VIFSKTSCSYCTMAKKLFHDMN-------VNYKVVELDLLEYGNQFQDALY-KMTGERTVPR 105 (146)
T ss_dssp HHHHHHHHH---HC-SE-EEEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCTTHHHHHHHHH-HHHSCCCSCE
T ss_pred HHHHHHHhc---CC-CE-EEEECCCChhHHHHHHHHHHcC-------CCeEEEECccCcCCHHHHHHHH-HHhCCCCcCe
Confidence 356677665 33 34 4499999999999999998762 44556666643 12 366 7899999999
Q ss_pred EEEEeCCC
Q 012452 432 ILFFPKHS 439 (463)
Q Consensus 432 i~~f~~g~ 439 (463)
++ .+|+
T Consensus 106 if--i~G~ 111 (146)
T 2ht9_A 106 IF--VNGT 111 (146)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 84 4665
No 284
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.88 E-value=0.00013 Score=63.73 Aligned_cols=106 Identities=8% Similarity=0.130 Sum_probs=78.1
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEec-CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc--CCCcHHHHHHcCCCC
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYA-PWCQFCQAMEGSYVELADKLAGNGVKVGKFRA--DGDQKEYAKQKLQLG 427 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA-~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~--d~~~~~l~~~~~~I~ 427 (463)
+.|.++|.++...+.. ..-++.++++. ..-..-..+.+.+.++|+++++ ++.|+.+|. +.+ ..+. +.|++.
T Consensus 14 PLV~e~t~en~~~~~~---~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg-ki~Fv~vd~~~~~~-~~~l-~~fGl~ 87 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIFG---GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG-KILFAFIDSDHTDN-QRIL-EFFGLK 87 (147)
T ss_dssp -CEEECCTTTHHHHHS---SSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT-TCEEEEECTTCGGG-HHHH-HHTTCC
T ss_pred CeeEEeccccHHHHhc---CCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC-ceEEEEEecchHhH-HHHH-HHcCCC
Confidence 4699999999988864 55555444343 3333466788999999999998 899999998 555 5677 899998
Q ss_pred C--CCEEEEEeC-CCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 428 S--FPTILFFPK-HSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~--~PTi~~f~~-g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
. +|++.++.. +...-+.+..+..+.+.|.+|++.+
T Consensus 88 ~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~ 125 (147)
T 3bj5_A 88 KEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRF 125 (147)
T ss_dssp GGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHH
T ss_pred cccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHH
Confidence 5 999999975 3311233333478999999999875
No 285
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=97.88 E-value=4.2e-05 Score=83.24 Aligned_cols=170 Identities=9% Similarity=0.116 Sum_probs=94.1
Q ss_pred CcEEEEechhHHHHHH-HHHHHc-C-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCC--
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLF-- 186 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~-~-~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~~-- 186 (463)
+++++++|||.||+++ +|+.+. + .++..+|+|.|..-....+.++++++++|++++++.-.. .+..........
T Consensus 241 ~~vvv~lSGGvDSsVla~Ll~~alG~~~V~aV~vd~g~~~~~e~e~a~~~a~~lGI~~~vvdi~~-~f~~~~~~l~~~~~ 319 (697)
T 2vxo_A 241 SKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAH-SFYNGTTTLPISDE 319 (697)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHSCGGGEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEECHH-HHHTCCCBCC----
T ss_pred cceEEEccCchHHHHHHHHHHHhcCCceEEEEEeccccCCcchHHHHHHHHHHhCCcEEEecchH-HHHhhhhhhccccc
Confidence 5799999999998776 777775 5 679999999997655567889999999999988774321 121100000000
Q ss_pred -CCCc-----cchhhhhhchhhhH----HHHH----Hc--cCc----eEEEeeeccCCccccc------CCCceecCCCC
Q 012452 187 -SFYE-----DGHQECCRVRKVRP----LRRA----LK--GLR----AWITGQRKDQSPGTRS------EIPVVQVDPVF 240 (463)
Q Consensus 187 -~~~~-----~~~~~Cc~~~Kv~P----l~r~----l~--~~~----~~itG~Rr~ES~~~Ra------~~~~~~~d~~~ 240 (463)
.-|. .....|-...|..- +.+. .+ +.+ .+.+|..+++-. ... ....+......
T Consensus 320 ~~~Y~~g~~~~l~~v~~~~~kR~iig~~~~~v~~~~A~~~g~~~~~~~LatG~~~~D~i-Es~~~~l~~g~~~iks~~nv 398 (697)
T 2vxo_A 320 DRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLI-ESASLVASGKAELIKTHHND 398 (697)
T ss_dssp ------CBCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTCCCTTSEEEECCCSSCCSB-CCHHHHHHSCCCGGGSCCSS
T ss_pred ccchhcccCcCcccccCHHHHHhHHHHHHHHHHHHHHHHcCCCcccEEEEEeccChhhh-hhhhhhhhcCcccccccccc
Confidence 0000 01111222222221 1111 12 333 678898776532 110 00000000000
Q ss_pred cCC-cCCCCCeEEEEeCccCcHHHHHHHHHhCCCCccchhccCC
Q 012452 241 EGL-EGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGY 283 (463)
Q Consensus 241 ~~~-~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~npLy~~Gy 283 (463)
.+. .....+...+.||.+++.+||.+|.++.|+|+.-.+.+=+
T Consensus 399 ~g~~~~~~~~~~~i~PL~~L~K~EVr~la~~lGlP~~i~~r~Ps 442 (697)
T 2vxo_A 399 TELIRKLREEGKVIEPLKDFHKDEVRILGRELGLPEELVSRHPF 442 (697)
T ss_dssp CHHHHHHHHTTCEECGGGGSCHHHHHHHHHHTTCCHHHHTCCCC
T ss_pred chhhHHhccCCEEEEecccCCHHHHHHHHHHcCCCcceeeCCCC
Confidence 000 0000112468999999999999999999999865655533
No 286
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.86 E-value=2.1e-05 Score=62.43 Aligned_cols=71 Identities=10% Similarity=0.072 Sum_probs=51.1
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC----c----HHHHHHcCCCCCCCEEEEEeCCCcCeeec
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD----Q----KEYAKQKLQLGSFPTILFFPKHSSKPIKY 445 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~----~----~~l~~~~~~I~~~PTi~~f~~g~~~~~~y 445 (463)
-++.|+++||++|+...+.|+++. +.+-.+|++.. . .++. +.+++.++|++++ +|+ .+
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g-------i~~~~~~v~~~~~~~~~~~~~~l~-~~~g~~~vP~l~~--~g~--~i-- 78 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG-------VDFEVIWIDKLEGEERKKVIEKVH-SISGSYSVPVVVK--GDK--HV-- 78 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT-------CCCEEEEGGGCCHHHHHHHHHHHH-HHHSSSCSCEEEE--TTE--EE--
T ss_pred eEEEEECCCChHHHHHHHHHHHcC-------CCcEEEEeeeCCccchHHHHHHHH-HhcCCCCcCEEEE--CCE--EE--
Confidence 366799999999999998888752 44555666631 1 3555 6788999999986 554 22
Q ss_pred CCCCCCHHHHHHHHH
Q 012452 446 PSERRDVDSLMAFVD 460 (463)
Q Consensus 446 ~gg~~~~~~L~~fI~ 460 (463)
+| .+.+.|.++|+
T Consensus 79 -~G-~~~~~l~~~l~ 91 (92)
T 3ic4_A 79 -LG-YNEEKLKELIR 91 (92)
T ss_dssp -ES-CCHHHHHHHHH
T ss_pred -eC-CCHHHHHHHhc
Confidence 22 58899999886
No 287
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.84 E-value=0.00012 Score=66.24 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=35.6
Q ss_pred CCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc
Q 012452 371 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 412 (463)
Q Consensus 371 ~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~ 412 (463)
.+.+|+.|+.+|||+|..+.+.+.++.+++.+ ++.|..+.+
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 56789999999999999999999999998876 687776654
No 288
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.82 E-value=6.4e-05 Score=67.03 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=35.0
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHh--cCCCeEEEEEEc
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL--AGNGVKVGKFRA 412 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~--~~~~v~f~~VD~ 412 (463)
..+..|+.|+..+||+|+.+.+.+.++.++| .+ ++.|...+.
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 69 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLF 69 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeC
Confidence 4577899999999999999999999998888 55 677766554
No 289
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.81 E-value=0.00011 Score=69.83 Aligned_cols=97 Identities=10% Similarity=0.234 Sum_probs=77.5
Q ss_pred CCeeecC-hhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCC
Q 012452 351 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSF 429 (463)
Q Consensus 351 ~~V~~lt-~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~ 429 (463)
+.|.+|+ .+++++++. .++.++|-|+++| |....+.|.++|+.+.+ .+.|+.+. + .+++ ++|++..
T Consensus 6 P~v~~l~s~~~~~~~l~---~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~-~~~F~~~~---~-~~v~-~~~~~~~- 72 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFIS---DKDASIVGFFDDS---FSEAHSEFLKAASNLRD-NYRFAHTN---V-ESLV-NEYDDNG- 72 (252)
T ss_dssp CCEEECCSHHHHHHHHT---SSSCEEEEEESCT---TSHHHHHHHHHHHHTTT-TSCEEEEC---C-HHHH-HHHCSSS-
T ss_pred CCceeecCHHHHHHHhh---cCCeEEEEEECCC---CChHHHHHHHHHHhccc-CcEEEEEC---h-HHHH-HHhCCCC-
Confidence 4678884 577788776 6788999999998 45667799999999977 68888773 4 6788 8999997
Q ss_pred CEEEEEeCCC------cCeeec-CCCCCCHHHHHHHHHH
Q 012452 430 PTILFFPKHS------SKPIKY-PSERRDVDSLMAFVDA 461 (463)
Q Consensus 430 PTi~~f~~g~------~~~~~y-~gg~~~~~~L~~fI~~ 461 (463)
|++++|+.+. .....| .| ..+.++|.+||+.
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y~~g-~~~~~~l~~fi~~ 110 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAYTEQ-KMTSGKIKKFIQE 110 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEECCCS-SCCHHHHHHHHHH
T ss_pred CcEEEEcchhhcccccccccccCCC-CcCHHHHHHHHHh
Confidence 9999998641 236788 77 5899999999986
No 290
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.80 E-value=5.7e-05 Score=61.63 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=50.4
Q ss_pred CCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc----HHHH---HHcCCCCCCCEEEEEeCCCcCee
Q 012452 371 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ----KEYA---KQKLQLGSFPTILFFPKHSSKPI 443 (463)
Q Consensus 371 ~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~----~~l~---~~~~~I~~~PTi~~f~~g~~~~~ 443 (463)
++.-++.|+++||++|+..++.|+++ ++.+-.+|++..+ .++. ++.+++.++|++++ +|+. .
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~-------~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~-~- 88 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDL-------GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEK-A- 88 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHH-------TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTE-E-
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHc-------CCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCE-E-
Confidence 34557779999999999999999875 2555666666421 2232 02368999999875 3321 2
Q ss_pred ecCCCCCCHHHHHHHHH
Q 012452 444 KYPSERRDVDSLMAFVD 460 (463)
Q Consensus 444 ~y~gg~~~~~~L~~fI~ 460 (463)
.| ..+.+.|.++|+
T Consensus 89 --ig-g~~~~~l~~~L~ 102 (103)
T 3nzn_A 89 --IV-GFKEKEIRESLG 102 (103)
T ss_dssp --EE-SCCHHHHHHHTT
T ss_pred --EE-cCCHHHHHHHhC
Confidence 23 267888888763
No 291
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.79 E-value=2.3e-05 Score=68.65 Aligned_cols=80 Identities=19% Similarity=0.358 Sum_probs=59.2
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC-----C-----------------------------
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG-----D----------------------------- 415 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~-----~----------------------------- 415 (463)
..+.+|+.|+.++||+|+++.+.++++ + ++.+..++.-- +
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~-~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----T-DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----C-SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----C-ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 567899999999999999999998764 2 46665543210 0
Q ss_pred -----------cHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 416 -----------QKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 416 -----------~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+.+++ ++++|+++||+++ .+|+ . ..| ..+.+.|.++|++.
T Consensus 87 ~~~~~~~~v~~~~~la-~~~gI~gtPt~vi-~nG~--~--i~G-~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 87 GGSICDNPVAETTSLG-EQFGFNGTPTLVF-PNGR--T--QSG-YSPMPQLEEIIRKN 137 (147)
T ss_dssp TCCCCSCSHHHHHHHH-HHTTCCSSCEEEC-TTSC--E--EES-CCCTTHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHH-HHhCCCccCEEEE-ECCE--E--eeC-CCCHHHHHHHHHHH
Confidence 14567 7899999999997 5665 2 334 67889999999875
No 292
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.77 E-value=0.00019 Score=64.82 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=74.4
Q ss_pred ChhhHHHHHhhc-----CCCCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcCCCc------------
Q 012452 357 NRTGMENLARLD-----HRQEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRADGDQ------------ 416 (463)
Q Consensus 357 t~~~f~~~i~~~-----~~~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d~~~------------ 416 (463)
-..+|++.++.. ++.|.++|+++++||..|..|.... +++.+.++. ++.+...|++..+
T Consensus 36 ~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~-nfV~w~~dv~~~e~~~~~~~~~~~~ 114 (178)
T 2ec4_A 36 FIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ-NFITWAWDLTKDSNRARFLTMCNRH 114 (178)
T ss_dssp CCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH-TEEEEEEECCSHHHHHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc-CEEEEEEeCCCchhhhhhhhhhhhh
Confidence 356777776654 4689999999999999999998654 467777766 7999999998761
Q ss_pred --HHHHH--HcCCCCCCCEEEEEeCCCc--Ce-eecCCCCCCHHHHHHHHHH
Q 012452 417 --KEYAK--QKLQLGSFPTILFFPKHSS--KP-IKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 417 --~~l~~--~~~~I~~~PTi~~f~~g~~--~~-~~y~gg~~~~~~L~~fI~~ 461 (463)
..++. +.|++.++|++.++..... .. ....| ..++++|.+.|.+
T Consensus 115 ~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G-~~~~~~ll~~L~~ 165 (178)
T 2ec4_A 115 FGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQG-NTTVDELMMRLMA 165 (178)
T ss_dssp TCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECS-CCCHHHHHHHHHH
T ss_pred hHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeC-CCCHHHHHHHHHH
Confidence 12330 2389999999999954321 23 34455 7899988877754
No 293
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.76 E-value=4.8e-05 Score=58.69 Aligned_cols=69 Identities=19% Similarity=0.345 Sum_probs=49.1
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRD 451 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~---~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~ 451 (463)
++.|+++||++|+.+.+.+++. ++.|..+|++.+. .++. +.+++.++|+++ .+|+ .+ + .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~~i~~~~~~~~~~~-~~~~~~~vP~l~--~~g~--~i---~---g 64 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-------GVSFQELPIDGNAAKREEMI-KRSGRTTVPQIF--IDAQ--HI---G---G 64 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCCEEEECTTCSHHHHHHH-HHHSSCCSCEEE--ETTE--EE---E---S
T ss_pred EEEEECCCChhHHHHHHHHHHC-------CCCcEEEECCCCHHHHHHHH-HHhCCCCcCEEE--ECCE--EE---e---C
Confidence 6779999999999999988864 3667788887651 2345 678999999984 4565 22 2 2
Q ss_pred HHHHHHHHHH
Q 012452 452 VDSLMAFVDA 461 (463)
Q Consensus 452 ~~~L~~fI~~ 461 (463)
.++|.+++++
T Consensus 65 ~~~i~~~~~~ 74 (82)
T 1fov_A 65 YDDLYALDAR 74 (82)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 3567776653
No 294
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.74 E-value=8e-05 Score=66.53 Aligned_cols=41 Identities=22% Similarity=0.478 Sum_probs=34.6
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEE
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 411 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD 411 (463)
.++++||.|+.-.||+|+.+.+.+.++.+++.+ ++.|..+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~-~~~~~~~~ 60 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE-GAKFQKNH 60 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TCEEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC-ceEEEEEe
Confidence 467899999999999999999999999999877 55655543
No 295
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.73 E-value=3.2e-05 Score=64.14 Aligned_cols=66 Identities=15% Similarity=0.356 Sum_probs=44.9
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---cHH----HHHHcCCCCCCCE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---QKE----YAKQKLQLGSFPT 431 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---~~~----l~~~~~~I~~~PT 431 (463)
+.+++++. .++ ++.|+++||++|+...+.|+++ ++.+-.+|++.. +.+ +. +.+++.++|+
T Consensus 10 ~~~~~~i~---~~~--v~vy~~~~Cp~C~~~~~~L~~~-------~i~~~~~di~~~~~~~~~~~~~l~-~~~g~~tvP~ 76 (113)
T 3rhb_A 10 ESIRKTVT---ENT--VVIYSKTWCSYCTEVKTLFKRL-------GVQPLVVELDQLGPQGPQLQKVLE-RLTGQHTVPN 76 (113)
T ss_dssp HHHHHHHH---HSS--EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHHHH-HHHSCCSSCE
T ss_pred HHHHHHHh---cCC--EEEEECCCChhHHHHHHHHHHc-------CCCCeEEEeecCCCChHHHHHHHH-HHhCCCCcCE
Confidence 34555554 333 6679999999999999999864 355666777652 122 44 4568999999
Q ss_pred EEEEeCCC
Q 012452 432 ILFFPKHS 439 (463)
Q Consensus 432 i~~f~~g~ 439 (463)
+ |.+|+
T Consensus 77 i--fi~g~ 82 (113)
T 3rhb_A 77 V--FVCGK 82 (113)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 8 45665
No 296
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=97.73 E-value=4.8e-05 Score=73.71 Aligned_cols=159 Identities=12% Similarity=0.129 Sum_probs=87.8
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc-----------CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-c
Q 012452 100 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-----------GRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-R 165 (463)
Q Consensus 100 ~eil~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~-----------~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl-~ 165 (463)
.+.|+..+++.+ .+++|++|||.||+++ .|+.++ +..+..++++.+. ++..+.++++++.+|+ +
T Consensus 28 v~~L~d~l~~~g~~~vvvglSGGvDSal~a~l~~~A~~~Lg~~~~~~~~~v~av~~p~~~--~~~~~~A~~~a~~lgi~~ 105 (279)
T 3q4g_A 28 VAFIKRKLTEARYKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGE--QKDEDEAQLALSFIRPTH 105 (279)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEECCSSS--CSCHHHHHHHHHHHCCSE
T ss_pred HHHHHHHHHHcCCCCEEEEccCCHHHHHHHHHHHHHHHHhCcccccCCceEEEEEecCCC--hHHHHHHHHHHHHhCCCe
Confidence 345555666655 5699999999999877 554443 3356677777553 3457889999999999 6
Q ss_pred EEEEc--CChHHHHH----HHHhcCCC--CCCccchhhhh--hchhhhHHHHHHccCceEEEee-eccCCcccccCCCce
Q 012452 166 IEYMF--PDAVEVQA----LVRSKGLF--SFYEDGHQECC--RVRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPVV 234 (463)
Q Consensus 166 i~~~~--p~~~~~~~----~~~~~g~~--~~~~~~~~~Cc--~~~Kv~Pl~r~l~~~~~~itG~-Rr~ES~~~Ra~~~~~ 234 (463)
.+++. +....+.. .+...+.. .....+...|. ...+..-|-..-......+.|+ .++|.. -..
T Consensus 106 ~~~i~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~NiqaR~R~~~Ly~~A~~~g~lVlgTgn~sE~~---~Gy--- 179 (279)
T 3q4g_A 106 SVSVNIKAGVDGLHAASHHALANTGLIPSDPAKVDFIKGNVKARARMVAQYEIAGYVGGLVLGTDHSAENI---TGF--- 179 (279)
T ss_dssp EEECCCHHHHHHHHHHHHHHHHHHTCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCCCHHHHH---HTC---
T ss_pred EEEEECHHHHHHHHHHHHHHhhhhcccccCCCcccchhhhHHHHHHHHHHHHHHHHCCCEEecCccHHhhh---ccc---
Confidence 65542 22222211 22222211 00111222232 2223333333333334566664 334431 111
Q ss_pred ecCCCCcCCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCC
Q 012452 235 QVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 274 (463)
Q Consensus 235 ~~d~~~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp 274 (463)
-..| |. +---++||.+.+..||+...+..|+|
T Consensus 180 --~Tky-----GD-~~~di~Pl~dl~Kt~Vr~LA~~lgiP 211 (279)
T 3q4g_A 180 --YTKF-----GD-GACDLAPLFGLNKRQVRLLAKTLGAP 211 (279)
T ss_dssp --SCTT-----TT-TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred --hhhc-----CC-cccceeecCCCcHHHHHHHHHHhCCc
Confidence 1111 11 12348999999999999999999875
No 297
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.72 E-value=4.5e-05 Score=60.54 Aligned_cols=55 Identities=18% Similarity=0.403 Sum_probs=42.5
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHcCCCCCCCEEEEEeCCC
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~----l~~~~~~I~~~PTi~~f~~g~ 439 (463)
-++.|+++||++|+.+.+.+++. ++.|..+|++.+ ++ +. +.+++.++|++ |.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~~~-~~~~~~l~-~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-------GAEFNEIDASAT-PELRAEMQ-ERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEESTTS-HHHHHHHH-HHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHH-HHhCCCCcCEE--EECCE
Confidence 47789999999999999888764 377888899876 43 44 47889999976 34665
No 298
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.70 E-value=5.9e-05 Score=80.87 Aligned_cols=153 Identities=18% Similarity=0.177 Sum_probs=92.1
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc-C-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 012452 101 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 176 (463)
Q Consensus 101 eil~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~-~-~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~ 176 (463)
..|+..+++.+ .+++|++|||.||+++ .|+.+. + .++..++++++...+++++.++++++++|++++++.-. ..+
T Consensus 315 ~~l~~~~~~~g~~~vvvglSGGvDSsv~a~la~~alG~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~i~-~~~ 393 (590)
T 3n05_A 315 VGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVSIE-PMF 393 (590)
T ss_dssp HHHHHHHHTTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSSCCHHHHHHHHHHHHHHTCEEEECCSH-HHH
T ss_pred HHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHHHHhCcccEEEEEECCCCCCHHHHHHHHHHHHHcCCcEEEEECh-HHH
Confidence 34555555554 5699999999998776 677664 6 67899999999888999999999999999998776322 223
Q ss_pred HHHHHhcCCCCCCccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEEE
Q 012452 177 QALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWN 254 (463)
Q Consensus 177 ~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~ 254 (463)
...........+...+ .....+..-+...-. +..++.|| .++|.. . .......| ..--++
T Consensus 394 ~~~~~~l~~~~~~~~n---~~ar~r~~~l~~~A~~~g~~vl~TG-n~se~~-~--Gy~t~~gd-----------~~~~~~ 455 (590)
T 3n05_A 394 DAYMASLGLTGLAEEN---LQSRLRGTTLMAISNQEGHIVLAPG-NKSELA-V--GYSTLYGD-----------SVGAYG 455 (590)
T ss_dssp HHHHHHHCCCTHHHHH---HHHHHHHHHHHHHHHHHTCEEBCCC-CHHHHH-H--TCCCSSCT-----------TSCSBC
T ss_pred HHHHHHhcccchhhhH---HHHHHHHHHHHHHHHhcCCEEEeCC-CHHHHh-c--CchhhcCC-----------Ccccee
Confidence 3333222211000000 001111222222222 44566677 455532 1 11110011 122378
Q ss_pred eCccCcHHHHHHHHHhCC
Q 012452 255 PVANVKGNDIWNFLRTMD 272 (463)
Q Consensus 255 PI~dWt~~DVw~yi~~~~ 272 (463)
||.+++..+|+...+..|
T Consensus 456 Pl~~l~K~eVr~la~~lg 473 (590)
T 3n05_A 456 PIKDVYKTSIFRLAEWRN 473 (590)
T ss_dssp TTTTSCHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhC
Confidence 999999999999998876
No 299
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.70 E-value=0.00015 Score=68.83 Aligned_cols=98 Identities=8% Similarity=0.086 Sum_probs=77.9
Q ss_pred CCeeecCh-hhHHHHHhhcCC-CCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCC
Q 012452 351 QNLVTLNR-TGMENLARLDHR-QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGS 428 (463)
Q Consensus 351 ~~V~~lt~-~~f~~~i~~~~~-~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~ 428 (463)
+.|.+|+. +++++++. . ++.++|-|++++| ....+.|.++|+.+.+ .+.|+... + .+++ ++|++..
T Consensus 6 P~v~~l~s~~~~~~~~~---~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~-~~~F~~t~---~-~~v~-~~~~v~~ 73 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLK---DGDDVVILGVFQGVG---DPGYLQYQDAANTLRE-DYKFHHTF---S-TEIA-KFLKVSL 73 (250)
T ss_dssp CSSEECCCHHHHHHHHH---HCSSCEEEEECSCTT---CHHHHHHHHHHHHHTT-TCCEEEEC---C-HHHH-HHHTCCS
T ss_pred CCceecCCHHHHHHHHh---cCCCeEEEEEEcCCC---chHHHHHHHHHHhhhc-CcEEEEEC---c-HHHH-HHcCCCC
Confidence 45777754 78888876 6 7899999999985 5778899999999977 68888763 4 7888 8899987
Q ss_pred CCEEEEEeCC------CcCeeecCC-CCCCHHHHHHHHHH
Q 012452 429 FPTILFFPKH------SSKPIKYPS-ERRDVDSLMAFVDA 461 (463)
Q Consensus 429 ~PTi~~f~~g------~~~~~~y~g-g~~~~~~L~~fI~~ 461 (463)
|+|++|+.+ ......|.| +..+.++|.+||+.
T Consensus 74 -p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~ 112 (250)
T 3ec3_A 74 -GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVK 112 (250)
T ss_dssp -SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHH
T ss_pred -CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHH
Confidence 999999853 122577875 47899999999985
No 300
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=97.67 E-value=8.5e-05 Score=72.10 Aligned_cols=160 Identities=13% Similarity=0.101 Sum_probs=85.3
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc-------CCCeEEEEEeCCCCcHHHHHHHHHHHHHhC-CcEEEE
Q 012452 100 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-------GRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYM 169 (463)
Q Consensus 100 ~eil~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~-------~~~i~vi~~DTg~~fpeT~~~~~~~~~~~g-l~i~~~ 169 (463)
+..|+..+.+.+ .+++|++|||.||+++ .|+.++ +.+..++.+-.-+..+...+-++.+++.+| ++.+++
T Consensus 34 v~~L~d~l~~~g~~~vvvglSGGiDSal~a~La~~A~daLG~~~~~~~viav~~p~~~~~~~~dA~~~a~~lg~i~~~~i 113 (285)
T 3dpi_A 34 IGFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRADETLTV 113 (285)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSCC---CHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEccCChhHHHHHHHHHHHHHHhcccCcccEEEEEEcCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 455666666665 5699999999999877 555442 222233333333334566778889999998 676665
Q ss_pred c--CChHHHHHHHHhcCCCCCCc---cchhhhh--hchhhhHHHHHHccCceEEEee-eccCCcccccCCCceecCCCCc
Q 012452 170 F--PDAVEVQALVRSKGLFSFYE---DGHQECC--RVRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPVVQVDPVFE 241 (463)
Q Consensus 170 ~--p~~~~~~~~~~~~g~~~~~~---~~~~~Cc--~~~Kv~Pl~r~l~~~~~~itG~-Rr~ES~~~Ra~~~~~~~d~~~~ 241 (463)
. +....+...+...|.. +.. .+...|. ...+..-+...-......+.|+ .++|.. ...-..+
T Consensus 114 ~i~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~NiqaR~Rm~~L~~~A~~~g~lVlgTgn~sE~~--------~Gy~T~~- 183 (285)
T 3dpi_A 114 DVKPAADAMLAALAAGGLA-YLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAESV--------MGFFTKF- 183 (285)
T ss_dssp CCHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHH--------HHHHHCC-
T ss_pred EChHHHHHHHHHHHhcCcc-ccccCCCchhhhhHHHHHHHHHHHHHHHHCCCEEEeCccHHhhh--------CCccccc-
Confidence 2 2222233333333432 111 1122332 2223333333333445566665 223311 0000001
Q ss_pred CCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCC
Q 012452 242 GLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 274 (463)
Q Consensus 242 ~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp 274 (463)
| .+..-++||.+.+..||+...+..|+|
T Consensus 184 ----G-D~~~~~~Pl~~l~K~eV~~la~~lg~p 211 (285)
T 3dpi_A 184 ----G-DGGADVLPLAGLTKRRVRALARMLGAD 211 (285)
T ss_dssp ----C-CCCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred ----C-CCceeEeeecCCcHHHHHHHHHHcCCC
Confidence 0 012248999999999999999998875
No 301
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.66 E-value=0.00028 Score=71.25 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=81.5
Q ss_pred CCeeecChhhHHHHHhhcCCCCcEEEEEecCCC-hhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCC--
Q 012452 351 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWC-QFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLG-- 427 (463)
Q Consensus 351 ~~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC-~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~-- 427 (463)
+.|.+++.+++..+.. .+.+++|.|+.++| ..|+.+...+.+++.++++ ++.|+.+|++.. ..++ +.|++.
T Consensus 219 p~v~elt~~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~~~~-~~~~-~~~gl~~~ 292 (382)
T 2r2j_A 219 PLVREITFENGEELTE---EGLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADCDKF-RHPL-LHIQKTPA 292 (382)
T ss_dssp CSSEECCHHHHHHHHT---TCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEETTTT-HHHH-HHTTCCGG
T ss_pred CceEecChhhHHHHhc---CCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEchHHh-HHHH-HHcCCCcc
Confidence 4788999999998765 78899999999998 4466666777777767776 899999999998 8888 899997
Q ss_pred CCCEEEEEeCCCcCeeecCC--CCCCHHHHHHHHHHh
Q 012452 428 SFPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 462 (463)
Q Consensus 428 ~~PTi~~f~~g~~~~~~y~g--g~~~~~~L~~fI~~l 462 (463)
.+|.+.++..++ ...|.. +..+.+.|.+||+.+
T Consensus 293 ~~P~i~i~~~~~--~y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 293 DCPVIAIDSFRH--MYVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp GCSEEEEECSSC--EEECCCSGGGGSTTHHHHHHHHH
T ss_pred CCCEEEEEcchh--cCCCCccccccCHHHHHHHHHHH
Confidence 689998886544 344432 134678999999875
No 302
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=97.65 E-value=9.4e-05 Score=71.46 Aligned_cols=157 Identities=11% Similarity=0.051 Sum_probs=84.8
Q ss_pred HHHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHcC---------CCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEE
Q 012452 100 LEIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTG---------RPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIE 167 (463)
Q Consensus 100 ~eil~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~~---------~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl-~i~ 167 (463)
.+.|+..+.+.+ .+++|++|||-||+++ .|+.+.. .++..++++.+.. ...+.++++++++|+ +.+
T Consensus 26 ~~~L~d~v~~~g~~~vvvgLSGGvDSsv~a~La~~a~~~lg~~~~~~~v~av~~~~~~~--~d~~~A~~va~~lgi~~~~ 103 (271)
T 1kqp_A 26 VNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQ--QDEDDAQLALKFIKPDKSW 103 (271)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSC--TTHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEeCCCCC--CCHHHHHHHHHhcCCCeEE
Confidence 345555555544 5699999999998766 6666543 3566677776543 347889999999998 665
Q ss_pred EEcCC--hHHHHHHHHh-cCCCCCCccchhhhhh--chhhhHHHHHHccCc-eEEEeeeccCCcccccCCCceecCCCCc
Q 012452 168 YMFPD--AVEVQALVRS-KGLFSFYEDGHQECCR--VRKVRPLRRALKGLR-AWITGQRKDQSPGTRSEIPVVQVDPVFE 241 (463)
Q Consensus 168 ~~~p~--~~~~~~~~~~-~g~~~~~~~~~~~Cc~--~~Kv~Pl~r~l~~~~-~~itG~Rr~ES~~~Ra~~~~~~~d~~~~ 241 (463)
++.-. ...+...+.. .|.+ ..+...|.. ..+...+...-.... .++.+-..+|.. .......-|
T Consensus 104 ~i~i~~~~~~~~~~l~~~~~~~---~~~~~~~N~~aR~r~~~l~~~A~~~g~lvl~tgn~~E~~---~Gy~t~~gd---- 173 (271)
T 1kqp_A 104 KFDIKSTVSAFSDQYQQETGDQ---LTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAV---TGFFTKYGD---- 173 (271)
T ss_dssp ECCCHHHHHHHHHHHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHHT---TTCSCTTTT----
T ss_pred EeccHHHHHHHHHHHhhhcCCC---CcchhhhhHHHHHHHHHHHHHHHHCCCEEEECccHHHhc---cCCcccccc----
Confidence 54221 1222222221 1321 112222221 112222222222222 333332334431 111110001
Q ss_pred CCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCCc
Q 012452 242 GLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPI 275 (463)
Q Consensus 242 ~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp~ 275 (463)
+.--++||.+++..||+...++.|+|.
T Consensus 174 -------~~~~~~Pl~~l~K~eVr~la~~lglp~ 200 (271)
T 1kqp_A 174 -------GGADLLPLTGLTKRQGRTLLKELGAPE 200 (271)
T ss_dssp -------TCCSBCTTTTCCHHHHHHHHHHTTCCT
T ss_pred -------ccccccccccCCHHHHHHHHHHcCCCH
Confidence 122388999999999999999999973
No 303
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.57 E-value=0.0002 Score=55.98 Aligned_cols=74 Identities=12% Similarity=0.133 Sum_probs=48.5
Q ss_pred cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcCCC-----CCCCEEEEEeCCCcCeee
Q 012452 373 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQL-----GSFPTILFFPKHSSKPIK 444 (463)
Q Consensus 373 ~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~---~~l~~~~~~I-----~~~PTi~~f~~g~~~~~~ 444 (463)
..++.|+++||++|+.....|+++. - .+.+..||.+.+. .++. +.++. .++|++++ +|+ .+
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i-~~~~~~vd~~~~~~~~~el~-~~~g~~~~~~~~vP~i~i--~g~--~i- 72 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----I-AFDETIIDDYAQRSKFYDEM-NQSGKVIFPISTVPQIFI--DDE--HI- 72 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----C-CCEEEECCSHHHHHHHHHHH-HTTTCCSSCCCSSCEEEE--TTE--EE-
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----C-CceEEEeecCCChhHHHHHH-HHhCCCCCCCCccCEEEE--CCE--EE-
Confidence 3477899999999999988886642 1 3455555554331 3466 67777 89999954 555 22
Q ss_pred cCCCCCCHHHHHHHHHHh
Q 012452 445 YPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 445 y~gg~~~~~~L~~fI~~l 462 (463)
| ..++|.++++++
T Consensus 73 --~---g~~~i~~~~~~~ 85 (89)
T 3msz_A 73 --G---GFTELKANADKI 85 (89)
T ss_dssp --E---SHHHHHHTHHHH
T ss_pred --e---ChHHHHHHHHHH
Confidence 2 256677766653
No 304
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.51 E-value=0.00026 Score=66.32 Aligned_cols=87 Identities=10% Similarity=0.120 Sum_probs=62.2
Q ss_pred CCCcEEEEEecCC-ChhHH-----HhHHHHHHHHHHhcCCCeEEEEEEcCCC----------------------cHHHHH
Q 012452 370 RQEPWLVVLYAPW-CQFCQ-----AMEGSYVELADKLAGNGVKVGKFRADGD----------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~FyA~w-C~~C~-----~~~p~l~~la~~~~~~~v~f~~VD~d~~----------------------~~~l~~ 421 (463)
.++++||+||+.| |++|. ...+.|.++ +. ++.|+.|..|.. +.+++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~--gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~va- 120 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP--HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFH- 120 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT--TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHH-
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC--CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHH-
Confidence 4789999999988 99999 777877776 53 588888876531 14677
Q ss_pred HcCCCCC---------CCEEEEEeCCCcCeee-c---CCCCCCHHHHHHHHHHh
Q 012452 422 QKLQLGS---------FPTILFFPKHSSKPIK-Y---PSERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~~---------~PTi~~f~~g~~~~~~-y---~gg~~~~~~L~~fI~~l 462 (463)
+.|+|.. .|++++++..+.+... . ..+..+.+++.+.|+++
T Consensus 121 k~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l 174 (224)
T 3keb_A 121 KRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEG 174 (224)
T ss_dssp HHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHh
Confidence 7888864 7999999755533221 1 12256789998888765
No 305
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.45 E-value=0.00013 Score=66.61 Aligned_cols=43 Identities=9% Similarity=0.205 Sum_probs=39.1
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRAD 413 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d 413 (463)
.++++||.|+++|||+|+.+.|.+.++.+++.+ ++.|..++++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 468899999999999999999999999999987 7999888864
No 306
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.45 E-value=0.00038 Score=64.80 Aligned_cols=93 Identities=13% Similarity=0.183 Sum_probs=70.8
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++.+|++|| +.||+.|....+.|.+..++|+..++.++.|.+|.. +.+++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpllsD~~~~va- 129 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLADTNHSLS- 129 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHHHHHhCCccCcccceEeCCCCHHH-
Confidence 4788999999 999999999999999999999877899999987641 14677
Q ss_pred HcCCCC------CCCEEEEEeCCCcC-ee-ecC-CCCCCHHHHHHHHHHhC
Q 012452 422 QKLQLG------SFPTILFFPKHSSK-PI-KYP-SERRDVDSLMAFVDALR 463 (463)
Q Consensus 422 ~~~~I~------~~PTi~~f~~g~~~-~~-~y~-gg~~~~~~L~~fI~~l~ 463 (463)
+.|+|- .++.+++++..+.+ .+ .+. .-.++.+++.+.|++|+
T Consensus 130 k~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~AlQ 180 (216)
T 3sbc_A 130 RDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAFQ 180 (216)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHhh
Confidence 788873 35777778666543 11 121 12489999999998874
No 307
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.41 E-value=0.00012 Score=62.47 Aligned_cols=70 Identities=16% Similarity=0.282 Sum_probs=47.0
Q ss_pred hhhHHHHHhhcCCCCcEEEEEecCCChhHHHh-HHHHHHHHHHhcCCCeEEEEEEcCCCc------HHHHHHcCCCCCCC
Q 012452 358 RTGMENLARLDHRQEPWLVVLYAPWCQFCQAM-EGSYVELADKLAGNGVKVGKFRADGDQ------KEYAKQKLQLGSFP 430 (463)
Q Consensus 358 ~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~-~p~l~~la~~~~~~~v~f~~VD~d~~~------~~l~~~~~~I~~~P 430 (463)
.+.+++++. ..+ ++.|+++|||+|+.. .+.|+++... .+.+..+|++.+. .++. +.+++.++|
T Consensus 27 ~~~v~~~i~---~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----~i~~~~vdvd~~~~~~~~~~~L~-~~~g~~tVP 96 (129)
T 3ctg_A 27 VAHVKDLIG---QKE--VFVAAKTYCPYCKATLSTLFQELNVP----KSKALVLELDEMSNGSEIQDALE-EISGQKTVP 96 (129)
T ss_dssp HHHHHHHHH---HSS--EEEEECTTCHHHHHHHHHHHTTSCCC----GGGEEEEEGGGSTTHHHHHHHHH-HHHSCCSSC
T ss_pred HHHHHHHHc---CCC--EEEEECCCCCchHHHHHHHHHhcCcc----CCCcEEEEccccCCHHHHHHHHH-HHhCCCCCC
Confidence 355666664 333 677999999999998 7777654311 1556666665441 3466 778999999
Q ss_pred EEEEEeCCC
Q 012452 431 TILFFPKHS 439 (463)
Q Consensus 431 Ti~~f~~g~ 439 (463)
++ |.+|+
T Consensus 97 ~v--fi~g~ 103 (129)
T 3ctg_A 97 NV--YINGK 103 (129)
T ss_dssp EE--EETTE
T ss_pred EE--EECCE
Confidence 96 45665
No 308
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.39 E-value=0.00028 Score=58.12 Aligned_cols=66 Identities=15% Similarity=0.332 Sum_probs=47.3
Q ss_pred hhHHHHHhhcCCCCcEEEEEec-----CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---HcCCCCCCC
Q 012452 359 TGMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFP 430 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA-----~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~---~~~~I~~~P 430 (463)
+.+++++. .+ .++ .|+. +||++|+.....|+++ ++.|..+|++.+ +++.. +.++..++|
T Consensus 6 ~~~~~~i~---~~-~vv-vy~~g~~~~~~Cp~C~~ak~~L~~~-------~i~~~~vdi~~~-~~~~~~l~~~~g~~~vP 72 (109)
T 1wik_A 6 SGLKVLTN---KA-SVM-LFMKGNKQEAKCGFSKQILEILNST-------GVEYETFDILED-EEVRQGLKTFSNWPTYP 72 (109)
T ss_dssp CCHHHHHT---TS-SEE-EEESSTTTCCCSSTHHHHHHHHHHT-------CSCEEEEESSSC-HHHHHHHHHHHSCCSSC
T ss_pred HHHHHHhc---cC-CEE-EEEecCCCCCCCchHHHHHHHHHHc-------CCCeEEEECCCC-HHHHHHHHHHhCCCCCC
Confidence 45777774 33 344 4666 9999999999888764 478999999987 54330 456788999
Q ss_pred EEEEEeCCC
Q 012452 431 TILFFPKHS 439 (463)
Q Consensus 431 Ti~~f~~g~ 439 (463)
++ |.+|+
T Consensus 73 ~i--fi~g~ 79 (109)
T 1wik_A 73 QL--YVRGD 79 (109)
T ss_dssp EE--ECSSS
T ss_pred EE--EECCE
Confidence 85 55666
No 309
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.36 E-value=0.00042 Score=62.47 Aligned_cols=52 Identities=17% Similarity=0.279 Sum_probs=39.8
Q ss_pred hHHHHHhhcCCCCcEEEEEecCCChhHHH-hHHHHHHHHHHhcCCCe-EEEEEEcCC
Q 012452 360 GMENLARLDHRQEPWLVVLYAPWCQFCQA-MEGSYVELADKLAGNGV-KVGKFRADG 414 (463)
Q Consensus 360 ~f~~~i~~~~~~k~vlV~FyA~wC~~C~~-~~p~l~~la~~~~~~~v-~f~~VD~d~ 414 (463)
++.++++ .++.||+.|++.||+.|.. ..|.|.+..++|+..++ .++.|.+|.
T Consensus 40 sLsd~~~---Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~ 93 (176)
T 4f82_A 40 SVRDQVA---GKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVND 93 (176)
T ss_dssp EHHHHHT---TCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred eHHHHhC---CCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 4555543 3335566777999999999 99999999999986678 888887653
No 310
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=97.36 E-value=0.00078 Score=65.10 Aligned_cols=156 Identities=11% Similarity=0.167 Sum_probs=84.8
Q ss_pred HHHHHHHHHHcC--CcEEEEechhHHHHHH-HHHHHcC-----------CCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-
Q 012452 100 LEIMDRALEKFG--NDIAIAFSGAEDVALI-EYAHLTG-----------RPFRVFSLDTGRLNPETYRFFDEVEKHFGI- 164 (463)
Q Consensus 100 ~eil~~~~~~~~--~~i~vafSGGKDS~vl-~L~~~~~-----------~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl- 164 (463)
.+.|+..+.+.+ .+++|++|||-||+++ .|+.++. .++..++++.+. ++..+.++++++++|+
T Consensus 27 ~~~L~~~l~~~g~~~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~--~~~~~dA~~va~~lgi~ 104 (275)
T 1wxi_A 27 VDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGV--QADEQDCQDAIAFIQPD 104 (275)
T ss_dssp HHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSS--CTTHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHcCCCCCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCC--ccCHHHHHHHHHHcCCC
Confidence 445555666544 4699999999999776 6666542 256677877653 3367889999999998
Q ss_pred cEEEEc--CChHHHHHHHHhcCCCCCCccchhhhhh--chhhhHHHHHHccCceEEEee-eccCCcccccCCCceecCCC
Q 012452 165 RIEYMF--PDAVEVQALVRSKGLFSFYEDGHQECCR--VRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPVVQVDPV 239 (463)
Q Consensus 165 ~i~~~~--p~~~~~~~~~~~~g~~~~~~~~~~~Cc~--~~Kv~Pl~r~l~~~~~~itG~-Rr~ES~~~Ra~~~~~~~d~~ 239 (463)
+.+++. +....+...+...|.+ ..+...|.. ..+...+...-......+.|+ ..+|.. ..... .
T Consensus 105 ~~~~i~i~~~~~~~~~~l~~~g~~---~~~~~~~N~~aR~r~~~l~~~A~~~g~lvlgTgn~~E~~---~Gy~t-----~ 173 (275)
T 1wxi_A 105 RVLTVNIKGAVLASEQALREAGIE---LSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAI---TGFFT-----K 173 (275)
T ss_dssp EEEECCCHHHHHHHHHHHHHHTCC---CCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHT---TTCSC-----T
T ss_pred eEEEEecHHHHHHHHHHHHhcCCC---CCCchhhhhhhhHHHHHHHHHHHHCCCEEEECccHHHHc---cCccc-----c
Confidence 665542 1112222222222331 112112221 112222222222333333333 223321 11100 0
Q ss_pred CcCCcCCCCCeEEEEeCccCcHHHHHHHHHhCCCC
Q 012452 240 FEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 274 (463)
Q Consensus 240 ~~~~~~~~~~~~k~~PI~dWt~~DVw~yi~~~~lp 274 (463)
+ + .+.--++||.+++..||+...+..|+|
T Consensus 174 ~-----g-d~~~~~~PL~~l~K~eVr~la~~lglp 202 (275)
T 1wxi_A 174 Y-----G-DGGTDINPLYRLNKRQGKQLLAALACP 202 (275)
T ss_dssp T-----T-TTCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred c-----C-CCccceeeccCCCHHHHHHHHHHhCCc
Confidence 1 0 012238999999999999999999987
No 311
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.35 E-value=0.0002 Score=59.62 Aligned_cols=66 Identities=15% Similarity=0.316 Sum_probs=45.6
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--cH----HHHHHcCCCCCCCEE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QK----EYAKQKLQLGSFPTI 432 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--~~----~l~~~~~~I~~~PTi 432 (463)
+.+++++. .++ ++.|+++|||+|+...+.|+++ ++.+-.+|++.. .. .+. +..+..++|++
T Consensus 8 ~~~~~~i~---~~~--v~vy~~~~Cp~C~~ak~~L~~~-------~i~~~~~dvd~~~~~~~~~~~l~-~~~g~~tvP~v 74 (114)
T 3h8q_A 8 RHLVGLIE---RSR--VVIFSKSYCPHSTRVKELFSSL-------GVECNVLELDQVDDGARVQEVLS-EITNQKTVPNI 74 (114)
T ss_dssp HHHHHHHH---HCS--EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTSTTHHHHHHHHH-HHHSCCSSCEE
T ss_pred HHHHHHhc---cCC--EEEEEcCCCCcHHHHHHHHHHc-------CCCcEEEEecCCCChHHHHHHHH-HHhCCCccCEE
Confidence 45666664 333 4449999999999999888874 356677777752 11 244 56688999998
Q ss_pred EEEeCCC
Q 012452 433 LFFPKHS 439 (463)
Q Consensus 433 ~~f~~g~ 439 (463)
++ +|+
T Consensus 75 fi--~g~ 79 (114)
T 3h8q_A 75 FV--NKV 79 (114)
T ss_dssp EE--TTE
T ss_pred EE--CCE
Confidence 65 555
No 312
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=97.27 E-value=0.00053 Score=64.69 Aligned_cols=123 Identities=18% Similarity=0.251 Sum_probs=76.1
Q ss_pred cEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCc-----H-HHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCC
Q 012452 113 DIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLN-----P-ETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGL 185 (463)
Q Consensus 113 ~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~f-----p-eT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~~~~g~ 185 (463)
++++++||||||++. +++.+.+.++..++...+... . .-.+.++.+++.+|+++.++.-...
T Consensus 6 Kvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~----------- 74 (237)
T 3rjz_A 6 DVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGE----------- 74 (237)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------------
T ss_pred EEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCC-----------
Confidence 589999999998765 777777777765554443221 1 1146788899999999987642211
Q ss_pred CCCCccchhhhhhchhhhHHHHHHcc--CceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEEEeCccCcHHH
Q 012452 186 FSFYEDGHQECCRVRKVRPLRRALKG--LRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGND 263 (463)
Q Consensus 186 ~~~~~~~~~~Cc~~~Kv~Pl~r~l~~--~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~D 263 (463)
....++.|.++++. .+++++|--..+. .|......... -|+.-+.||.....++
T Consensus 75 ------------~~~e~e~l~~~l~~~~i~~vv~Gdi~s~y--qr~r~e~vc~~----------~gl~~~~PLW~~d~~~ 130 (237)
T 3rjz_A 75 ------------KEKEVEDLKRVLSGLKIQGIVAGALASKY--QRKRIEKVAKE----------LGLEVYTPAWGRDAKE 130 (237)
T ss_dssp ---------------CHHHHHHHHTTSCCSEEECC---CCS--HHHHHHHHHHH----------TTCEEECSSSSCCHHH
T ss_pred ------------chHHHHHHHHHHHhcCCcEEEECCcchHH--HHHHHHHHHHH----------cCCEEEccccCCCHHH
Confidence 01124667777774 5688899887775 45544322211 1567889999998887
Q ss_pred HHHHHHh
Q 012452 264 IWNFLRT 270 (463)
Q Consensus 264 Vw~yi~~ 270 (463)
+..-+..
T Consensus 131 Ll~e~i~ 137 (237)
T 3rjz_A 131 YMRELLN 137 (237)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655444
No 313
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.23 E-value=0.0014 Score=62.11 Aligned_cols=102 Identities=10% Similarity=0.101 Sum_probs=75.7
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCCh---h-HHHhHHHHHHHHHHhcC--CCeEEEEEEcCCCcHHHHHHcCC
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ---F-CQAMEGSYVELADKLAG--NGVKVGKFRADGDQKEYAKQKLQ 425 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~---~-C~~~~p~l~~la~~~~~--~~v~f~~VD~d~~~~~l~~~~~~ 425 (463)
.|.++|.+++..+. +.+++|.|+..-+. . ...+...+.++|+++++ ..+.|+.+|++.. ..+. +.|+
T Consensus 115 lv~e~t~~n~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~-~~~~-~~fg 187 (252)
T 2h8l_A 115 ICPHMTEDNKDLIQ-----GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF-SHEL-SDFG 187 (252)
T ss_dssp SSCEECTTTHHHHS-----SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT-HHHH-GGGT
T ss_pred CeeecccccHhhhc-----CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHH-HHHH-HHcC
Confidence 68899999988852 35666777754332 1 22477888899999986 2399999999988 7788 8999
Q ss_pred C----CCCCEEEEEeCCCcCeeecCCCCCCHHH--HHHHHHHh
Q 012452 426 L----GSFPTILFFPKHSSKPIKYPSERRDVDS--LMAFVDAL 462 (463)
Q Consensus 426 I----~~~PTi~~f~~g~~~~~~y~gg~~~~~~--L~~fI~~l 462 (463)
+ ..+|.+.++...+. .+.+.+ ..+.+. |.+|++.+
T Consensus 188 l~~~~~~~P~v~i~~~~~~-ky~~~~-~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 188 LESTAGEIPVVAIRTAKGE-KFVMQE-EFSRDGKALERFLQDY 228 (252)
T ss_dssp CCCCSCSSCEEEEECTTSC-EEECCS-CCCTTSHHHHHHHHHH
T ss_pred CCCccCCCCEEEEEeCcCc-EecCCc-ccCcchHHHHHHHHHH
Confidence 9 36999999964332 344554 677788 99999875
No 314
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.15 E-value=0.00019 Score=65.27 Aligned_cols=42 Identities=19% Similarity=0.456 Sum_probs=36.1
Q ss_pred CCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEcC
Q 012452 371 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRAD 413 (463)
Q Consensus 371 ~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~d 413 (463)
.+++||.||+.|||+|+.+.|.+ .++.+.+.+ ++.|..+++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 47899999999999999999987 688888876 6888888764
No 315
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.11 E-value=0.005 Score=58.24 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=76.3
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecC-CC---h-hHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCC
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAP-WC---Q-FCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL 426 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~-wC---~-~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I 426 (463)
.|.++|.+++..+. .+++.++.|+.. .+ . ....+...+.++|++++ ++.|+.+|.+.. .... +.|++
T Consensus 117 lv~e~t~~n~~~~~----~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--ki~F~~~d~~~~-~~~l-~~fgl 188 (250)
T 3ec3_A 117 LVGHRKTSNDAKRY----SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--EYTFAIADEEDY-ATEV-KDLGL 188 (250)
T ss_dssp TEEEECTTTHHHHS----CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--TSEEEEEETTTT-HHHH-HHTTC
T ss_pred ceeecCccchhhhh----ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--ceeEEEEcHHHH-HHHH-HHcCC
Confidence 68899999988755 367777777753 32 3 34557889999999998 599999999988 7778 79999
Q ss_pred CC--C-CEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 427 GS--F-PTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 ~~--~-PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.. + |.++++..... .+.+..+..+.++|.+|++.+
T Consensus 189 ~~~~~~p~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 189 SESGGDVNAAILDESGK-KFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp SSCSCSCEEEEECTTSC-EEECCCCSCCHHHHHHHHHHH
T ss_pred CccCCCcEEEEEcCCCc-eecCCcccCCHHHHHHHHHHH
Confidence 64 4 47777754332 445553468999999999875
No 316
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.10 E-value=0.0025 Score=59.35 Aligned_cols=93 Identities=12% Similarity=0.224 Sum_probs=69.2
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC---------------------------cHHHHH
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD---------------------------QKEYAK 421 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~---------------------------~~~l~~ 421 (463)
.++.+||+|| +.||+.|......|.++..+|+..++.++.|.+|.. +.+++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD~~~~va- 133 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIA- 133 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH-
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccCcccHHH-
Confidence 4688999999 999999999999999999999887899999987641 14678
Q ss_pred HcCCCC----CC--CEEEEEeCCCcC-eee-cC-CCCCCHHHHHHHHHHhC
Q 012452 422 QKLQLG----SF--PTILFFPKHSSK-PIK-YP-SERRDVDSLMAFVDALR 463 (463)
Q Consensus 422 ~~~~I~----~~--PTi~~f~~g~~~-~~~-y~-gg~~~~~~L~~fI~~l~ 463 (463)
+.|+|- ++ -.+++++..+.+ .+. +. .-.++.+++.+.|++|+
T Consensus 134 ~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aLQ 184 (219)
T 3tue_A 134 RSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQ 184 (219)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCeeEEEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHhh
Confidence 788873 23 356666555533 221 22 22489999999998874
No 317
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.88 E-value=0.0015 Score=64.61 Aligned_cols=88 Identities=6% Similarity=0.009 Sum_probs=61.7
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--------------------cHHHHHHcCCC--
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--------------------QKEYAKQKLQL-- 426 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--------------------~~~l~~~~~~I-- 426 (463)
.+++|||+|| +.||+.|....+.|.+ ....++.++.|+.|.. +.+++ +.|+|
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~-~~ygv~~ 97 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILH-EFFNVLE 97 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHH-HHTTCEE
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHH-HhcCCCC
Confidence 5789999999 6799999988777754 1223688888876532 15678 88998
Q ss_pred --CCCCEEEEEeCCCcCeeecCC--CCCCHHHHHHHHHHh
Q 012452 427 --GSFPTILFFPKHSSKPIKYPS--ERRDVDSLMAFVDAL 462 (463)
Q Consensus 427 --~~~PTi~~f~~g~~~~~~y~g--g~~~~~~L~~fI~~l 462 (463)
..+|+.++++..+.+...|.+ -....+++.++|+++
T Consensus 98 ~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 98 NGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp TTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 357888888766654323322 135678888888876
No 318
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=96.80 E-value=0.0059 Score=66.32 Aligned_cols=69 Identities=16% Similarity=0.184 Sum_probs=47.0
Q ss_pred HHHHHHHHHcC-CcEEEEechhHHHHHH-HHHHHc----C---CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEE
Q 012452 101 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT----G---RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYM 169 (463)
Q Consensus 101 eil~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~----~---~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~ 169 (463)
..|+..+++.+ .+++|++|||.||+++ .|+.++ + .++..++++....-+++++.++++++++|++++++
T Consensus 350 ~~l~~~l~~~g~~~vvvglSGGvDSsvaa~l~~~a~~~lg~~~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i 427 (680)
T 3sdb_A 350 SGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEI 427 (680)
T ss_dssp HHHHHHHHHTTSCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC--------CHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEecCCccHHHHHHHHHHHHHHhCCCCceEEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 44666666766 5799999999999864 444432 3 46888899987777899999999999999997765
No 319
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.73 E-value=0.00088 Score=60.58 Aligned_cols=39 Identities=21% Similarity=0.403 Sum_probs=34.0
Q ss_pred CCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc
Q 012452 371 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 412 (463)
Q Consensus 371 ~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~ 412 (463)
++++||.|++.|||||+.+.|.+.++.+++ + +.|..+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v~~~~~p~ 60 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--TDIGKMHI 60 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--SCCEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--CeEEEEec
Confidence 678999999999999999999999999998 4 66666654
No 320
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.0016 Score=55.39 Aligned_cols=72 Identities=13% Similarity=0.214 Sum_probs=42.9
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcH---HHHHHcCCCCCCCEEEEE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQK---EYAKQKLQLGSFPTILFF 435 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~---~l~~~~~~I~~~PTi~~f 435 (463)
++|++++. .++ ++.|..+|||+|+..+..|.+.. .+ +..+.++.||.+.+.. +..++..+..++|+++
T Consensus 5 ~~~~~ii~---~~~--Vvvysk~~Cp~C~~ak~lL~~~~-~~-~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~If-- 75 (127)
T 3l4n_A 5 KEYSLILD---LSP--IIIFSKSTCSYSKGMKELLENEY-QF-IPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLL-- 75 (127)
T ss_dssp HHHHHHHT---SCS--EEEEECTTCHHHHHHHHHHHHHE-EE-ESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE--
T ss_pred HHHHHHHc---cCC--EEEEEcCCCccHHHHHHHHHHhc-cc-CCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEE--
Confidence 56777775 333 67799999999999998887631 01 1123444444433311 2221335788999985
Q ss_pred eCCC
Q 012452 436 PKHS 439 (463)
Q Consensus 436 ~~g~ 439 (463)
-+|+
T Consensus 76 I~G~ 79 (127)
T 3l4n_A 76 VNGV 79 (127)
T ss_dssp ETTE
T ss_pred ECCE
Confidence 3554
No 321
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.60 E-value=0.0023 Score=55.03 Aligned_cols=67 Identities=12% Similarity=0.236 Sum_probs=45.4
Q ss_pred hhHHHHHhhcCCCCcEEEEEec----CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---HcCCCCCCCE
Q 012452 359 TGMENLARLDHRQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFPT 431 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA----~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~---~~~~I~~~PT 431 (463)
+.+++++. ...|+|+.++ +||++|++....|.++ ++.|..+|++.+ +++.. +..+..++|.
T Consensus 26 ~~v~~~i~----~~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~~d-~~~~~~L~~~~G~~tvP~ 93 (135)
T 2wci_A 26 EKIQRQIA----ENPILLYMKGSPKLPSCGFSAQAVQALAAC-------GERFAYVDILQN-PDIRAELPKYANWPTFPQ 93 (135)
T ss_dssp HHHHHHHH----HCSEEEEESBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGGGC-HHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHhc----cCCEEEEEEecCCCCCCccHHHHHHHHHHc-------CCceEEEECCCC-HHHHHHHHHHHCCCCcCE
Confidence 45566654 3356665554 9999999998888654 477888999877 54430 3347788998
Q ss_pred EEEEeCCC
Q 012452 432 ILFFPKHS 439 (463)
Q Consensus 432 i~~f~~g~ 439 (463)
++ -+|+
T Consensus 94 Vf--I~G~ 99 (135)
T 2wci_A 94 LW--VDGE 99 (135)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 64 4565
No 322
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=96.53 E-value=0.0042 Score=60.93 Aligned_cols=118 Identities=8% Similarity=0.005 Sum_probs=76.2
Q ss_pred cEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHh-------CCcEEEEcCChHHHHHHHHhcC
Q 012452 113 DIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-------GIRIEYMFPDAVEVQALVRSKG 184 (463)
Q Consensus 113 ~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~-------gl~i~~~~p~~~~~~~~~~~~g 184 (463)
++++++|| .||+++ +++.+.+.++..+|++++. ...+.++++++++ +++++++.+ +....
T Consensus 181 kvlvllSG-vDS~vaa~ll~~~G~~v~~v~~~~~~---~~~~~a~~~a~~l~~~~~~~~i~~~vv~~----~~~~~---- 248 (307)
T 1vbk_A 181 RMIGILHD-ELSALAIFLMMKRGVEVIPVYIGKDD---KNLEKVRSLWNLLKRYSYGSKGFLVVAES----FDRVL---- 248 (307)
T ss_dssp EEEEECSS-HHHHHHHHHHHHBTCEEEEEEESCSS---HHHHHHHHHHHHHHTTCTTSCCCCEEESS----HHHHH----
T ss_pred cEEEEEeC-CcHHHHHHHHHhCCCeEEEEEEEECH---HHHHHHHHHHHHHhhhccCCCCcEEEeCC----CHHHH----
Confidence 58999999 998766 8888899999999999542 4567778888887 666666521 11110
Q ss_pred CCCCCccchhhhhhchhhhHHHHHH-ccCceEEEeeeccCCcccccCCCceecCCCCcCCcCCCCCeEEEEeCccCcHHH
Q 012452 185 LFSFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGND 263 (463)
Q Consensus 185 ~~~~~~~~~~~Cc~~~Kv~Pl~r~l-~~~~~~itG~Rr~ES~~~Ra~~~~~~~d~~~~~~~~~~~~~~k~~PI~dWt~~D 263 (463)
.-+. .+.+.++||....|-. -+.+.....+.. ....-+.||.+++..|
T Consensus 249 ---------------------~~A~~~ga~~I~tG~~~~~~~--~qt~~l~~~~~~--------~~~~vl~PL~~~~K~e 297 (307)
T 1vbk_A 249 ---------------------KLIRDFGVKGVIKGLRPNDLN--SEVSEITEDFKM--------FPVPVYYPLIALPEEY 297 (307)
T ss_dssp ---------------------HHHHHHTCCEEECCCCGGGCC--TTCHHHHHHHHH--------CSSCEECHHHHSCHHH
T ss_pred ---------------------HHHHHcCCCEEEECcccchhc--cccHHHhhhccC--------cCCeEEEccCCCCHHH
Confidence 1111 2667899998755421 011111011110 1233588999999999
Q ss_pred HHHHHHhCCC
Q 012452 264 IWNFLRTMDV 273 (463)
Q Consensus 264 Vw~yi~~~~l 273 (463)
|.++-++.|+
T Consensus 298 I~~~a~~iGl 307 (307)
T 1vbk_A 298 IKSVKERLGL 307 (307)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 9999988764
No 323
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=96.39 E-value=0.013 Score=53.50 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=33.9
Q ss_pred CCCcEEEEEecCCChhHHHhHHHH-HHHHHHhcC-CCeEEEEEEc
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFRA 412 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l-~~la~~~~~-~~v~f~~VD~ 412 (463)
..+..||.|+...||+|+.+.+.+ ..+.++|.+ .++.|...+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 467889999999999999999986 577777743 3688877653
No 324
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.018 Score=55.98 Aligned_cols=101 Identities=11% Similarity=0.163 Sum_probs=70.5
Q ss_pred CCeeec-ChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH-HcCC---
Q 012452 351 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK-QKLQ--- 425 (463)
Q Consensus 351 ~~V~~l-t~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~-~~~~--- 425 (463)
..+..+ +.+++++++. ..+++.+|.| ..- ....+.|..+|..+.+ .+.|+.++-++. ..+.. ++|+
T Consensus 143 ~~v~~i~~~~~l~~~l~--~~~~~~vi~f-s~~----~~~~~~f~~~A~~~~~-~~~F~~v~~~~~-a~~~~~~~~~~~~ 213 (298)
T 3ed3_A 143 SYVKKFVRIDTLGSLLR--KSPKLSVVLF-SKQ----DKISPVYKSIALDWLG-KFDFYSISNKKL-KQLTDMNPTYEKT 213 (298)
T ss_dssp CCEEECSCGGGHHHHHT--SCSSEEEEEE-ESS----SSCCHHHHHHHHHTBT-TEEEEEEEGGGC-CCCCTTCTTSTTC
T ss_pred cccEEcCCHHHHHHHHh--cCCceEEEEE-cCC----CcchHHHHHHHHHhhc-CcEEEEEcchHh-hhhhhhhhhcccC
Confidence 356667 4577888876 2246666666 332 2345789999999988 899999985533 11000 0111
Q ss_pred --C-------------CCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHH
Q 012452 426 --L-------------GSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 460 (463)
Q Consensus 426 --I-------------~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~ 460 (463)
| ...|++++|+.....++.|.|+..+.++|.+||.
T Consensus 214 p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~ 263 (298)
T 3ed3_A 214 PEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLR 263 (298)
T ss_dssp HHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHH
T ss_pred cchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHH
Confidence 2 6799999998766568999976789999999997
No 325
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.19 E-value=0.0075 Score=49.51 Aligned_cols=59 Identities=15% Similarity=0.244 Sum_probs=39.4
Q ss_pred CCcEEEEEec----CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHH---HHcCCCCCCCEEEEEeCCC
Q 012452 371 QEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYA---KQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 371 ~k~vlV~FyA----~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~---~~~~~I~~~PTi~~f~~g~ 439 (463)
...|+|+-.. |||++|+.....|.+. ++.|-.+|++.+ +++. .+..+...+|.++ -+|+
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~-------gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~if--i~g~ 82 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNL-------NVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLY--IGGE 82 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEE--ETTE
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHHc-------CCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEE--ECCE
Confidence 4455553333 5999999998888764 477888888876 4433 0334778999764 4554
No 326
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.18 E-value=0.034 Score=51.86 Aligned_cols=42 Identities=7% Similarity=0.139 Sum_probs=32.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHH-HHHHHHHhcC-CCeEEEEEE
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGS-YVELADKLAG-NGVKVGKFR 411 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~-l~~la~~~~~-~~v~f~~VD 411 (463)
..+..|+.|+...||+|+.+.+. +.++.++|.+ .++.|+..+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 35678999999999999999996 4788888842 367776654
No 327
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=96.13 E-value=0.012 Score=63.49 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=48.7
Q ss_pred HHHHcC-CcEEEEechhHHHHHH-HHH--------HHcCCC---------------------------------eEEEEE
Q 012452 106 ALEKFG-NDIAIAFSGAEDVALI-EYA--------HLTGRP---------------------------------FRVFSL 142 (463)
Q Consensus 106 ~~~~~~-~~i~vafSGGKDS~vl-~L~--------~~~~~~---------------------------------i~vi~~ 142 (463)
.+++.+ .+++|++|||-||+++ .|+ ...+.+ +..+|.
T Consensus 297 ~~~~~g~~~vvlglSGGvDSsv~A~Lv~~~~~~a~~alG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~m 376 (634)
T 3ilv_A 297 YMRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQ 376 (634)
T ss_dssp HHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHHHHHHHHHHEEEEEE
T ss_pred HHHHhCCCeEEEEccCCHHHHHHHHHHHHHHHHHHHHhCchhhhhhhhcccccccccccccccccchhHhhhheeeeeec
Confidence 344545 5699999999999765 331 223443 667888
Q ss_pred eCCCCcHHHHHHHHHHHHHhCCcEEEEc
Q 012452 143 DTGRLNPETYRFFDEVEKHFGIRIEYMF 170 (463)
Q Consensus 143 DTg~~fpeT~~~~~~~~~~~gl~i~~~~ 170 (463)
.+...-.++++-++++++.+|++.+++.
T Consensus 377 ~~~~ss~~~~~dA~~la~~LGi~~~~Id 404 (634)
T 3ilv_A 377 STRNSGDETYTSAKTLAESIGATFYNWS 404 (634)
T ss_dssp ECTTCCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEEc
Confidence 8777778999999999999999887653
No 328
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=96.07 E-value=0.01 Score=46.27 Aligned_cols=55 Identities=18% Similarity=0.152 Sum_probs=39.9
Q ss_pred EEEEecC----CChhHHHhHHHHHHHHHHhcCCCeEEEEEEcC-----CCcHH----HHHHcCCCC-----CCCEEEEEe
Q 012452 375 LVVLYAP----WCQFCQAMEGSYVELADKLAGNGVKVGKFRAD-----GDQKE----YAKQKLQLG-----SFPTILFFP 436 (463)
Q Consensus 375 lV~FyA~----wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d-----~~~~~----l~~~~~~I~-----~~PTi~~f~ 436 (463)
++.|+.+ ||++|++.+..|++. ++.+-.+|++ .+ ++ +. +..+.. ++|++++ .
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-------gi~y~~idI~~~~~~~~-~~~~~~l~-~~~g~~~~~~~tvP~v~i-~ 71 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-------KQPFEFINIMPEKGVFD-DEKIAELL-TKLGRDTQIGLTMPQVFA-P 71 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-------TCCEEEEESCSBTTBCC-HHHHHHHH-HHHTCSCCTTCCSCEEEC-T
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-------CCCEEEEEeeccccccC-HHHHHHHH-HHhCCCCCCCCccCEEEE-E
Confidence 5678899 999999988887763 4777788887 44 33 44 566777 8998753 3
Q ss_pred CCC
Q 012452 437 KHS 439 (463)
Q Consensus 437 ~g~ 439 (463)
+|+
T Consensus 72 ~g~ 74 (87)
T 1aba_A 72 DGS 74 (87)
T ss_dssp TSC
T ss_pred CCE
Confidence 555
No 329
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.05 E-value=0.011 Score=49.50 Aligned_cols=67 Identities=18% Similarity=0.314 Sum_probs=43.5
Q ss_pred hhHHHHHhhcCCCCcEEEEEec----CCChhHHHhHHHHHHHHHHhcCCCeE-EEEEEcCCCcHHHHH---HcCCCCCCC
Q 012452 359 TGMENLARLDHRQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVK-VGKFRADGDQKEYAK---QKLQLGSFP 430 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA----~wC~~C~~~~p~l~~la~~~~~~~v~-f~~VD~d~~~~~l~~---~~~~I~~~P 430 (463)
+.+++++. ..+|+|+-.. |||++|+..+..|+++ ++. |-.+|++.+ +++.. +..+...+|
T Consensus 11 ~~v~~~i~----~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~vdV~~d-~~~~~~l~~~tg~~tvP 78 (118)
T 2wem_A 11 EQLDALVK----KDKVVVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTIP 78 (118)
T ss_dssp HHHHHHHH----HSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCCCEEEESSSC-HHHHHHHHHHHTCCSSC
T ss_pred HHHHHHhc----cCCEEEEEecCCCCCccHHHHHHHHHHHHc-------CCCCCEEEEcCCC-HHHHHHHHHHhCCCCcC
Confidence 45566664 3445553333 5999999998888764 463 788888876 54430 233678899
Q ss_pred EEEEEeCCC
Q 012452 431 TILFFPKHS 439 (463)
Q Consensus 431 Ti~~f~~g~ 439 (463)
.++ -+|+
T Consensus 79 ~vf--I~g~ 85 (118)
T 2wem_A 79 QVY--LNGE 85 (118)
T ss_dssp EEE--ETTE
T ss_pred eEE--ECCE
Confidence 984 4555
No 330
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.022 Score=47.76 Aligned_cols=66 Identities=20% Similarity=0.356 Sum_probs=42.8
Q ss_pred hHHHHHhhcCCCCcEEEEEec----CCChhHHHhHHHHHHHHHHhcCCCeE---EEEEEcCCCcHHHH---HHcCCCCCC
Q 012452 360 GMENLARLDHRQEPWLVVLYA----PWCQFCQAMEGSYVELADKLAGNGVK---VGKFRADGDQKEYA---KQKLQLGSF 429 (463)
Q Consensus 360 ~f~~~i~~~~~~k~vlV~FyA----~wC~~C~~~~p~l~~la~~~~~~~v~---f~~VD~d~~~~~l~---~~~~~I~~~ 429 (463)
-++++++ ..+|+|+-.. |||++|+.....|.+. ++. |..+|++.+ .++. ++..+...+
T Consensus 8 ~v~~~i~----~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~-------gv~~~~~~~~dv~~~-~~~~~~l~~~sg~~tv 75 (121)
T 3gx8_A 8 AIEDAIE----SAPVVLFMKGTPEFPKCGFSRATIGLLGNQ-------GVDPAKFAAYNVLED-PELREGIKEFSEWPTI 75 (121)
T ss_dssp HHHHHHH----SCSEEEEESBCSSSBCTTHHHHHHHHHHHH-------TBCGGGEEEEECTTC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHhc----cCCEEEEEeccCCCCCCccHHHHHHHHHHc-------CCCcceEEEEEecCC-HHHHHHHHHHhCCCCC
Confidence 4555554 3445554443 5999999999888875 355 778888876 5443 033467889
Q ss_pred CEEEEEeCCC
Q 012452 430 PTILFFPKHS 439 (463)
Q Consensus 430 PTi~~f~~g~ 439 (463)
|.++ -+|+
T Consensus 76 P~vf--I~g~ 83 (121)
T 3gx8_A 76 PQLY--VNKE 83 (121)
T ss_dssp CEEE--ETTE
T ss_pred CeEE--ECCE
Confidence 9984 4555
No 331
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.96 E-value=0.052 Score=50.64 Aligned_cols=98 Identities=15% Similarity=0.220 Sum_probs=66.9
Q ss_pred eeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCCCCCE
Q 012452 353 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFPT 431 (463)
Q Consensus 353 V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~~~~l~~~~~~I~~~PT 431 (463)
+..++.++++.++. .+..+++.+.|....|..+ .+++..+.. ..+.+..++ +.+ .+++ ++|+|+++||
T Consensus 140 l~~~~~~~l~~~~~-~~~~~~~al~f~~~~~~~~-------~~~~~d~~~~~~i~v~~~~-~~~-~~l~-~~f~v~~~Ps 208 (244)
T 3q6o_A 140 LEPAXLEEIDGFFA-RNNEEYLALIFEXGGSYLA-------REVALDLSQHKGVAVRRVL-NTE-ANVV-RKFGVTDFPS 208 (244)
T ss_dssp CSCCCHHHHHTHHH-HCCCSEEEEEEECTTCCHH-------HHHHHHTTTCTTEEEEEEE-TTC-HHHH-HHHTCCCSSE
T ss_pred cccccHHHHHHHhh-cCCCceEEEEEEECCcchH-------HHHHHHhccCCceEEEEEe-Cch-HHHH-HHcCCCCCCe
Confidence 33456677887775 3466778888887765433 334444543 357777666 444 7999 8999999999
Q ss_pred EEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 432 ILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 432 i~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
+++|..+++ ...+.....+-+.+..++++|
T Consensus 209 lvl~~~~g~-~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 209 CYLLFRNGS-VSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp EEEEETTSC-EEECCCSSSSHHHHHHHHHTC
T ss_pred EEEEeCCCC-eEeeccccccHHHHHHHHHhC
Confidence 999876654 566665456677788888765
No 332
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=95.94 E-value=0.014 Score=54.49 Aligned_cols=58 Identities=12% Similarity=0.224 Sum_probs=43.0
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc--HHHHHHcCCCCCCCEEEEEeCCC
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ--KEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~--~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
...++.|..+||++|++.+..|++. ++.+-.+|++.+. .++. +.++..++|+++ .+|+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-------~i~~~~~~i~~~~~~~~l~-~~~g~~~vP~~~--~~g~ 228 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-------GLSFEEIILGHDATIVSVR-AVSGRTTVPQVF--IGGK 228 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-------TCCCEEEETTTTCCHHHHH-HHTCCSSSCEEE--ETTE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-------CCceEEEECCCchHHHHHH-HHhCCCCcCEEE--ECCE
Confidence 4567778999999999998888764 3566677776541 3466 778999999985 3554
No 333
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.89 E-value=0.015 Score=47.78 Aligned_cols=55 Identities=13% Similarity=0.077 Sum_probs=38.4
Q ss_pred EEEEEecCCChhHH------HhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHcC--------CCCCCCEEEEE
Q 012452 374 WLVVLYAPWCQFCQ------AMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKL--------QLGSFPTILFF 435 (463)
Q Consensus 374 vlV~FyA~wC~~C~------~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~----l~~~~~--------~I~~~PTi~~f 435 (463)
-|+.|+.++|++|+ +.+..|++ .++.|..+|++.+ ++ +. +.+ +...+|.|+
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~-------~gi~y~~vdI~~~-~~~~~~l~-~~~~~~~~~~~g~~tvP~vf-- 77 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA-------NKIEFEEVDITMS-EEQRQWMY-KNVPPEKKPTQGNPLPPQIF-- 77 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH-------TTCCEEEEETTTC-HHHHHHHH-HSCCTTTCCSSSSCCSCEEE--
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH-------cCCCEEEEECCCC-HHHHHHHH-HHhcccccccCCCCCCCEEE--
Confidence 46778999999999 55555543 2588899999887 44 33 444 666789874
Q ss_pred eCCC
Q 012452 436 PKHS 439 (463)
Q Consensus 436 ~~g~ 439 (463)
-+|+
T Consensus 78 i~g~ 81 (111)
T 2ct6_A 78 NGDR 81 (111)
T ss_dssp ETTE
T ss_pred ECCE
Confidence 4554
No 334
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=95.88 E-value=0.0062 Score=55.25 Aligned_cols=41 Identities=24% Similarity=0.552 Sum_probs=34.8
Q ss_pred CCcEEEEEecCCChhHHHhHHHH---HHHHHHhcCCCeEEEEEEc
Q 012452 371 QEPWLVVLYAPWCQFCQAMEGSY---VELADKLAGNGVKVGKFRA 412 (463)
Q Consensus 371 ~k~vlV~FyA~wC~~C~~~~p~l---~~la~~~~~~~v~f~~VD~ 412 (463)
+++.||.|+..|||+|+.+.|.+ .++.+.+.+ ++.|..++.
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~-~v~~~~~~~ 64 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE-GTKMTKYHV 64 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT-TCCEEEEEC
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCC-CcEEEEEec
Confidence 47899999999999999999987 699999986 566666654
No 335
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=95.82 E-value=0.014 Score=46.14 Aligned_cols=54 Identities=9% Similarity=-0.009 Sum_probs=38.2
Q ss_pred EEEEecCCChhH------HHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHH----HHHHcCC--CCCCCEEEEEeCCC
Q 012452 375 LVVLYAPWCQFC------QAMEGSYVELADKLAGNGVKVGKFRADGDQKE----YAKQKLQ--LGSFPTILFFPKHS 439 (463)
Q Consensus 375 lV~FyA~wC~~C------~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~----l~~~~~~--I~~~PTi~~f~~g~ 439 (463)
++.|+.++|++| +.....|++ .++.|-.+|++.+ ++ +. +.++ ...+|.++ -+|+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~-------~~i~~~~~di~~~-~~~~~~l~-~~~g~~~~~vP~if--i~g~ 69 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG-------KRIQYQLVDISQD-NALRDEMR-TLAGNPKATPPQIV--NGNH 69 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH-------TTCCCEEEETTSC-HHHHHHHH-HHTTCTTCCSCEEE--ETTE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH-------CCCceEEEECCCC-HHHHHHHH-HHhCCCCCCCCEEE--ECCE
Confidence 567899999999 666655553 2578889999876 43 33 4667 67999874 4554
No 336
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=95.81 E-value=0.015 Score=47.95 Aligned_cols=65 Identities=15% Similarity=0.348 Sum_probs=43.5
Q ss_pred hHHHHHhhcCCCCcEEEEEec-----CCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHH---HcCCCCCCCE
Q 012452 360 GMENLARLDHRQEPWLVVLYA-----PWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAK---QKLQLGSFPT 431 (463)
Q Consensus 360 ~f~~~i~~~~~~k~vlV~FyA-----~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~---~~~~I~~~PT 431 (463)
.++++++ ..+|+ .|.. +||++|+.....|.+. ++.|-.+|++.+ +++.. +..+...+|.
T Consensus 8 ~v~~~i~----~~~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~-------gi~y~~~di~~d-~~~~~~l~~~~g~~tvP~ 74 (111)
T 3zyw_A 8 RLKKLTH----AAPCM-LFMKGTPQEPRCGFSKQMVEILHKH-------NIQFSSFDIFSD-EEVRQGLKAYSSWPTYPQ 74 (111)
T ss_dssp HHHHHHT----SSSEE-EEESBCSSSBSSHHHHHHHHHHHHT-------TCCCEEEEGGGC-HHHHHHHHHHHTCCSSCE
T ss_pred HHHHHHh----cCCEE-EEEecCCCCCcchhHHHHHHHHHHc-------CCCeEEEECcCC-HHHHHHHHHHHCCCCCCE
Confidence 3455553 44444 4667 9999999998888753 467788898877 55430 2336788999
Q ss_pred EEEEeCCC
Q 012452 432 ILFFPKHS 439 (463)
Q Consensus 432 i~~f~~g~ 439 (463)
++ -+|+
T Consensus 75 if--i~g~ 80 (111)
T 3zyw_A 75 LY--VSGE 80 (111)
T ss_dssp EE--ETTE
T ss_pred EE--ECCE
Confidence 85 3554
No 337
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=95.65 E-value=0.081 Score=50.57 Aligned_cols=79 Identities=15% Similarity=0.188 Sum_probs=53.5
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc-----------------HHHHHHcCCCCCC--CEE
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ-----------------KEYAKQKLQLGSF--PTI 432 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~-----------------~~l~~~~~~I~~~--PTi 432 (463)
...|..|..++|++|...+..|.+++.++ ++....++++..+ ..+. ++++..++ |.+
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~-~~~G~~tVyTPqI 118 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYM-RALGRNGVYTPQA 118 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHH-HHTTCSCCCSSEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEEEecccccccchhhhhhhHHHHHHH-HHhCCCcccCCEE
Confidence 35778899999999999999999998764 3543444433220 2356 78899988 997
Q ss_pred EEEeCCCcCeeecCCCCCCHHHHHHHHHH
Q 012452 433 LFFPKHSSKPIKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 433 ~~f~~g~~~~~~y~gg~~~~~~L~~fI~~ 461 (463)
++ +|+ ....| .+.+.|.+.|.+
T Consensus 119 ~I--ng~---~~v~G--~d~~~l~~~l~~ 140 (270)
T 2axo_A 119 IL--NGR---DHVKG--ADVRGIYDRLDA 140 (270)
T ss_dssp EE--TTT---EEEET--TCHHHHHHHHHH
T ss_pred EE--CCE---EeecC--CCHHHHHHHHHH
Confidence 65 555 12223 456777777653
No 338
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=95.11 E-value=0.024 Score=59.33 Aligned_cols=107 Identities=20% Similarity=0.274 Sum_probs=63.7
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHH----HhcCCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALV----RSKGLF 186 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~~~~----~~~g~~ 186 (463)
.++.+.+|||-||+++ .++.+...++..+++... ..+| .++++++++++|++.+.+......+...+ .....+
T Consensus 239 ~~v~v~LSGGlDSs~vaala~~~~~~~~~~t~~~~-~~~E-~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~~~~~~~~ 316 (503)
T 1q15_A 239 DTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTE-LSNE-FEFSQQVADALGTHHQMKILSETEVINGIIESIYYNEIF 316 (503)
T ss_dssp SEEEEECCSSHHHHHHHHHHTTTCSEEEEEEEEET-TBCC-HHHHHHHHHHHTCEEEEEEECHHHHHHHHHHHHHHHCCC
T ss_pred CcEEEECCCCHHHHHHHHHHHHhCCCcEEEEEeCC-CccH-HHHHHHHHHHhCCceEEEECCHHHHHHHHHHHHHHhcCC
Confidence 4689999999998766 667666666777766553 2334 57899999999999887765554332221 111111
Q ss_pred CCCccchhhhhhchhhhHHHHHH-ccCceEEEeeeccCCc
Q 012452 187 SFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSP 225 (463)
Q Consensus 187 ~~~~~~~~~Cc~~~Kv~Pl~r~l-~~~~~~itG~Rr~ES~ 225 (463)
. ....+.. ....-+.+.. .+.+++++|.-.||-.
T Consensus 317 ~----p~~~~~~-~~~~~l~~~a~~~~~VvltG~GaDElf 351 (503)
T 1q15_A 317 D----GLSAEIQ-SGLFNVYRQAQGQVSCMLTGYGSDLLF 351 (503)
T ss_dssp C----HHHHHHH-HHHHHHHHHHBTTBSEEECCTTHHHHH
T ss_pred C----cccchhH-HHHHHHHHHHHCCCCEEEeCCChhhhc
Confidence 0 0111111 1112222222 3567999999888864
No 339
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=94.58 E-value=0.055 Score=48.72 Aligned_cols=92 Identities=10% Similarity=0.168 Sum_probs=61.9
Q ss_pred CCCcEEEEEe-cCCChhHH-HhHHHHHHHHHHh-cCCCeE-EEEEEcCCC---------------------cHHHHHHcC
Q 012452 370 RQEPWLVVLY-APWCQFCQ-AMEGSYVELADKL-AGNGVK-VGKFRADGD---------------------QKEYAKQKL 424 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~-~~~p~l~~la~~~-~~~~v~-f~~VD~d~~---------------------~~~l~~~~~ 424 (463)
.++.+||+|| ..||+.|. ...+.|.+...++ +..++. ++.|.+|.. +.+++ +.|
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~~~~f~lLsD~~~~~a-~~y 120 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMDIKKIKYISDGNSSFT-DSM 120 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTSHHH-HHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcCCCCceEEEeCchHHH-HHh
Confidence 3567777777 78999999 8899999999999 665673 777765431 15677 788
Q ss_pred CCC-----------CCCEEEEEeCCCcCeeecCC--C---------CCCHHHHHHHHHHh
Q 012452 425 QLG-----------SFPTILFFPKHSSKPIKYPS--E---------RRDVDSLMAFVDAL 462 (463)
Q Consensus 425 ~I~-----------~~PTi~~f~~g~~~~~~y~g--g---------~~~~~~L~~fI~~l 462 (463)
++. ...+.+++++|....+.... + ..+++++.++|++.
T Consensus 121 Gv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v~~~~~~~~~~~~~~~~~~~~vL~~L~~~ 180 (182)
T 1xiy_A 121 NMLVDKSNFFMGMRPWRFVAIVENNILVKMFQEKDKQHNIQTDPYDISTVNNVKEFLKNN 180 (182)
T ss_dssp TCEEECGGGTCCEEECCEEEEEETTEEEEEEECSSCCTTCSSCCCSTTSHHHHHHHHHCC
T ss_pred CCceeccccCCCCceEEEEEEEcCCEEEEEEEeCCcccccccCcccCCCHHHHHHHHHhc
Confidence 863 24566777765532222111 1 36788888888753
No 340
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=94.42 E-value=0.062 Score=47.89 Aligned_cols=41 Identities=17% Similarity=0.359 Sum_probs=34.7
Q ss_pred CCcEEEEEecCCChhHHHhHHHH-HHHHHHhcCCCeEEEEEEc
Q 012452 371 QEPWLVVLYAPWCQFCQAMEGSY-VELADKLAGNGVKVGKFRA 412 (463)
Q Consensus 371 ~k~vlV~FyA~wC~~C~~~~p~l-~~la~~~~~~~v~f~~VD~ 412 (463)
.++++|.||..+||+|..+.+.+ .++.+++.+ .+.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~-~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD-IVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT-TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC-ceEEEEEec
Confidence 46788999999999999999999 999998876 577766654
No 341
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=94.33 E-value=0.15 Score=53.55 Aligned_cols=98 Identities=11% Similarity=0.159 Sum_probs=63.8
Q ss_pred CeeecChhhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcC-CCeEEEEEEcCCCcHHHHHHcCCCCCCC
Q 012452 352 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAG-NGVKVGKFRADGDQKEYAKQKLQLGSFP 430 (463)
Q Consensus 352 ~V~~lt~~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~-~~v~f~~VD~d~~~~~l~~~~~~I~~~P 430 (463)
.+..++.++++.++. .+..++++|.|.... .....+++..+.. .++.|..++ +.+ .+++ ++|+|+.+|
T Consensus 139 ~l~~it~~~l~~~l~-~~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~-~~~-~~l~-~kfgV~~~P 207 (519)
T 3t58_A 139 PLEPAKLNDIDGFFT-RNKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVL-NTE-SDLV-NKFGVTDFP 207 (519)
T ss_dssp CCSBCCHHHHTTGGG-SCCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEE-TTC-HHHH-HHHTCCCSS
T ss_pred ccCcCCHHHHHHHhc-cCCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEec-Cch-HHHH-HHcCCCCCC
Confidence 344566778877775 345677888888664 2245666666664 357776554 445 7999 999999999
Q ss_pred EEEEEeCCCcCeeecCCCCCCHHHHHHHHHH
Q 012452 431 TILFFPKHSSKPIKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 431 Ti~~f~~g~~~~~~y~gg~~~~~~L~~fI~~ 461 (463)
++++|..+++ ...+....-.-..+..++++
T Consensus 208 slvl~~~nGk-~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 208 SCYLLLRNGS-VSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp EEEEEETTSC-EEECCCSSCSHHHHHHHHTT
T ss_pred eEEEEeCCCc-eeecccccccHHHHHHHHHH
Confidence 9999987764 33333322233445566554
No 342
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=93.97 E-value=0.16 Score=53.77 Aligned_cols=66 Identities=18% Similarity=0.210 Sum_probs=51.1
Q ss_pred HHHHHHcC-CcEEEEechhHHHHHH-HHHHHc--CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEE
Q 012452 104 DRALEKFG-NDIAIAFSGAEDVALI-EYAHLT--GRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYM 169 (463)
Q Consensus 104 ~~~~~~~~-~~i~vafSGGKDS~vl-~L~~~~--~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~ 169 (463)
+.-+.+.+ .+++|+.|||-||+++ -|+..+ ...|..+++-+-..-.+|++-...+++.+|+....+
T Consensus 292 ~dy~~k~g~~~~vlglSGGiDSal~~~la~~alg~~~v~~v~mp~~~ts~~t~~~a~~la~~lg~~~~~i 361 (565)
T 4f4h_A 292 RDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMARRVGVRYDEI 361 (565)
T ss_dssp HHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCTTCCHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHcCCCcEEEecCCCccHHHHHHHHHHHhCCccEEEEeccccccccchHHHHHHHHHHhCCceeee
Confidence 33444444 5699999999999876 455443 335778888888889999999999999999988765
No 343
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=93.87 E-value=0.091 Score=55.07 Aligned_cols=107 Identities=21% Similarity=0.170 Sum_probs=64.2
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHH----HHHHhcCCC
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQ----ALVRSKGLF 186 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~~----~~~~~~g~~ 186 (463)
.++.+.+|||-||+++ .|+.+...++..+++.... .+| .++++++++++|++.+.+.....++. ..+.....+
T Consensus 242 ~~vgv~LSGGlDSS~vaala~~~~~~v~tfti~~~~-~~E-~~~A~~vA~~lg~~h~~i~i~~~~~~~~l~~~~~~~~~~ 319 (513)
T 1jgt_A 242 DTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTDT-SNE-FREARAVVDHLRTRHREITIPTTELLAQLPYAVWASESV 319 (513)
T ss_dssp CCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECSS-CCC-HHHHHHHHHHHTCEEEEEECCHHHHHTTHHHHHHHHCCC
T ss_pred CcEEEECCCcHHHHHHHHHHHHhCCCceEEEcCCCC-CCH-HHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHHHhCCC
Confidence 4689999999998766 6777665667777776542 334 57899999999999888765544322 122111111
Q ss_pred CCCccchhhhhhchhhhHHHHHH-ccCceEEEeeeccCCc
Q 012452 187 SFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSP 225 (463)
Q Consensus 187 ~~~~~~~~~Cc~~~Kv~Pl~r~l-~~~~~~itG~Rr~ES~ 225 (463)
. ....|. .....-+.+.. .+.+++++|.-.||-.
T Consensus 320 ~----p~~~~~-~~~~~~l~~~a~~g~~VvltG~GaDElf 354 (513)
T 1jgt_A 320 D----PDIIEY-LLPLTALYRALDGPERRILTGYGADIPL 354 (513)
T ss_dssp C----HHHHHH-HHHHHHHHHHCCSSCCEEECCTTTHHHH
T ss_pred C----cccchh-HHHHHHHHHHHHcCCCEEEeCCChhhcc
Confidence 0 000111 11112222322 3567999999888864
No 344
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=93.85 E-value=0.34 Score=51.12 Aligned_cols=107 Identities=16% Similarity=0.258 Sum_probs=62.8
Q ss_pred CcEEEEechhHHHHHH-HHHHHcCC--------------CeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 012452 112 NDIAIAFSGAEDVALI-EYAHLTGR--------------PFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 176 (463)
Q Consensus 112 ~~i~vafSGGKDS~vl-~L~~~~~~--------------~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~p~~~~~ 176 (463)
.++.+.+|||-||+++ .++.+... .+..+++.... .+| .++++++++++|++.+.+.....++
T Consensus 227 vpvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~~-~~E-~~~A~~vA~~lg~~h~~i~~~~~~~ 304 (553)
T 1ct9_A 227 VPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPG-SPD-LKAAQEVANHLGTVHHEIHFTVQEG 304 (553)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTT-CHH-HHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCCC-CcH-HHHHHHHHHHhCCCCEEEECCHHHH
Confidence 4699999999998766 67766433 26666665432 355 5789999999999988776554332
Q ss_pred ----HHHHHhcCCCCCCccchhhhhhchhhhHHHHHHc--cCceEEEeeeccCCc
Q 012452 177 ----QALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSP 225 (463)
Q Consensus 177 ----~~~~~~~g~~~~~~~~~~~Cc~~~Kv~Pl~r~l~--~~~~~itG~Rr~ES~ 225 (463)
...+..... +......| . ....-+.+.++ +.+++++|.-.||-.
T Consensus 305 ~~~l~~~i~~~~~---~~~~~~~~-~-~~~~~l~~~a~~~g~~vvLsG~GaDElf 354 (553)
T 1ct9_A 305 LDAIRDVIYHIET---YDVTTIRA-S-TPMYLMSRKIKAMGIKMVLSGEGSDEVF 354 (553)
T ss_dssp HHHHHHHHHHHCC---CCHHHHHH-H-HHHHHHHHHHHHTTCCEEECCTTHHHHH
T ss_pred HHHHHHHHHHhcC---CCcccchH-H-HHHHHHHHHHHHcCCeEEEECCCchhcc
Confidence 222222221 11101111 1 11223334333 567999999888854
No 345
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=92.89 E-value=0.19 Score=42.10 Aligned_cols=58 Identities=12% Similarity=0.047 Sum_probs=35.6
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcC--------CCCCCCEEE
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKL--------QLGSFPTIL 433 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~---~~l~~~~~--------~I~~~PTi~ 433 (463)
||+.|.++.|++|+-... =..+..-+..++|.|-.+|++.+. .++. ++. +...+|.|+
T Consensus 1 ~V~vYtt~~c~~c~~kk~-c~~aK~lL~~kgV~feEidI~~d~~~r~eM~-~~~~~~~~~~~G~~tvPQIF 69 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKK-QQDVLGFLEANKIGFEEKDIAANEENRKWMR-ENVPENSRPATGYPLPPQIF 69 (121)
T ss_dssp CEEEEECTTCSCHHHHHH-HHHHHHHHHHTTCCEEEEECTTCHHHHHHHH-HHSCGGGSCSSSSCCSCEEE
T ss_pred CEEEEecCCCCCccchHH-HHHHHHHHHHCCCceEEEECCCCHHHHHHHH-HhccccccccCCCcCCCEEE
Confidence 477788999999942221 111222233346999999998761 2344 456 667788664
No 346
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=92.52 E-value=0.19 Score=41.82 Aligned_cols=68 Identities=18% Similarity=0.293 Sum_probs=43.1
Q ss_pred hhhHHHHHhhcCCCCcEEEEEe----cCCChhHHHhHHHHHHHHHHhcCCCe-EEEEEEcCCCcHHHHH---HcCCCCCC
Q 012452 358 RTGMENLARLDHRQEPWLVVLY----APWCQFCQAMEGSYVELADKLAGNGV-KVGKFRADGDQKEYAK---QKLQLGSF 429 (463)
Q Consensus 358 ~~~f~~~i~~~~~~k~vlV~Fy----A~wC~~C~~~~p~l~~la~~~~~~~v-~f~~VD~d~~~~~l~~---~~~~I~~~ 429 (463)
.+.++++++ ..+|+|+-- +|.|++|++....|... ++ .|..+|++.+ +++.. +.-+-..+
T Consensus 10 ~e~i~~~i~----~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~-------gv~~~~~~~v~~~-~~~r~~l~~~sg~~Tv 77 (118)
T 2wul_A 10 AEQLDALVK----KDKVVVFLKGTPEQPQCGFSNAVVQILRLH-------GVRDYAAYNVLDD-PELRQGIKDYSNWPTI 77 (118)
T ss_dssp HHHHHHHHH----HSSEEEEESBCSSSBSSHHHHHHHHHHHHT-------TCCSCEEEETTSC-HHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHh----cCCEEEEEcCCCCCCCCHHHHHHHHHHHHh-------CCcCeEeecccCC-HHHHHHHHHhccCCCC
Confidence 456777775 344555332 36899999988777543 34 3778888877 55431 33356778
Q ss_pred CEEEEEeCCC
Q 012452 430 PTILFFPKHS 439 (463)
Q Consensus 430 PTi~~f~~g~ 439 (463)
|.|+ -+|+
T Consensus 78 PqIF--I~g~ 85 (118)
T 2wul_A 78 PQVY--LNGE 85 (118)
T ss_dssp CEEE--ETTE
T ss_pred CeEe--ECCE
Confidence 8874 5555
No 347
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=92.19 E-value=1.1 Score=40.51 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=28.2
Q ss_pred cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEE
Q 012452 373 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKV 407 (463)
Q Consensus 373 ~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f 407 (463)
..|.+|+.+-||+|-...+.++++.+.+.+ ++.|
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~-~v~v 36 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPG-VIQF 36 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCT-TSEE
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCC-CceE
Confidence 357788899999999999999999999864 3444
No 348
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=90.86 E-value=0.15 Score=45.33 Aligned_cols=45 Identities=13% Similarity=0.194 Sum_probs=35.9
Q ss_pred CCCcEEEEEe-cCCChhHHHhHHHHHHHHHHhcCCCeE-EEEEEcCC
Q 012452 370 RQEPWLVVLY-APWCQFCQAMEGSYVELADKLAGNGVK-VGKFRADG 414 (463)
Q Consensus 370 ~~k~vlV~Fy-A~wC~~C~~~~p~l~~la~~~~~~~v~-f~~VD~d~ 414 (463)
.++.+||+|| ..||+.|....+.|.+...+++..++. ++.|.+|.
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~ 87 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVND 87 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 3567788787 679999999999999999998765674 77776653
No 349
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=89.46 E-value=0.82 Score=37.77 Aligned_cols=33 Identities=6% Similarity=-0.012 Sum_probs=25.1
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 414 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~ 414 (463)
++.|+.|+|+.|++....|++. ++.|-.+|+..
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~ 39 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-------GIDYTFHDYKK 39 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-------TCCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCcEEEEeeeC
Confidence 6678899999999988887763 36666677754
No 350
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=89.17 E-value=0.22 Score=49.52 Aligned_cols=60 Identities=13% Similarity=0.150 Sum_probs=35.0
Q ss_pred EEEEecCCChhHHHhHH-HHHHHHHHhcCCCeEEEEEEcCCCc----HHHHHHcCCCCCCCEEEEEeCCC
Q 012452 375 LVVLYAPWCQFCQAMEG-SYVELADKLAGNGVKVGKFRADGDQ----KEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p-~l~~la~~~~~~~v~f~~VD~d~~~----~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
|+.|..+||++|++... .|+++.-.|. .+.++.+|-...+ ..+. +..+...+|.|+ -+|+
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~~gV~y~--eidVlEld~~~~~~e~~~~L~-~~tG~~TVPqVF--I~Gk 327 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEKLKVPRS--KVLVLQLNDMKEGADIQAALY-EINGQRTVPNIY--INGK 327 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTTCCCTT--TEEEEEGGGSTTHHHHHHHHH-HHHCCCSSCEEE--ETTE
T ss_pred EEEEEcCCCcchHHHHHHHHHHcCCCcc--eEEEEEeccccCCHHHHHHHH-HHHCCCCcCEEE--ECCE
Confidence 55588999999998765 4554332222 2444444322221 2333 456888999875 4555
No 351
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=89.13 E-value=0.55 Score=41.90 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=32.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHh-cCCCeEEEEEE
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKL-AGNGVKVGKFR 411 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~-~~~~v~f~~VD 411 (463)
..+.+||.|....||+|+.+.+.+.++.+++ .+ +|.|+.-+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g-~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGED-NVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTT-TEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-CEEEEEEE
Confidence 4567888899999999999999998877776 44 67777655
No 352
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=88.91 E-value=0.75 Score=40.57 Aligned_cols=42 Identities=17% Similarity=0.329 Sum_probs=32.3
Q ss_pred CCCcEEEEEecCCChhHHHhHHHH-HHHHHHhcC-CCeEEEEEE
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSY-VELADKLAG-NGVKVGKFR 411 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l-~~la~~~~~-~~v~f~~VD 411 (463)
..+..|+.|+...||+|..+.+.+ ..|.++|.+ .++.|...+
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 456789999999999999999998 578788853 256666544
No 353
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=86.50 E-value=1.4 Score=40.10 Aligned_cols=43 Identities=12% Similarity=0.012 Sum_probs=32.0
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHH-HHHhc-CCCeEEEEEEc
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVEL-ADKLA-GNGVKVGKFRA 412 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~l-a~~~~-~~~v~f~~VD~ 412 (463)
..+.+||.|....||+|+.+.+.+..+ .++|- +.+|.|+..+.
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 356789999999999999999877654 44772 23687776653
No 354
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=85.96 E-value=0.56 Score=44.80 Aligned_cols=30 Identities=17% Similarity=0.366 Sum_probs=25.7
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHH
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADK 399 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~ 399 (463)
.++.+|+.|+-+.||+|+++.+.+.+..+.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 467899999999999999999999865544
No 355
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=85.37 E-value=0.7 Score=48.90 Aligned_cols=67 Identities=10% Similarity=0.245 Sum_probs=43.2
Q ss_pred hhHHHHHhhcCCCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC--cHHHH---HHcCCCCCCCEEE
Q 012452 359 TGMENLARLDHRQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD--QKEYA---KQKLQLGSFPTIL 433 (463)
Q Consensus 359 ~~f~~~i~~~~~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~--~~~l~---~~~~~I~~~PTi~ 433 (463)
+.+++++. .. -++.|..+|||+|+..+..|.+. ++.+-.+|++.. +.++. ++..+...+|.+
T Consensus 9 ~~v~~~i~---~~--~v~vy~~~~Cp~C~~~k~~L~~~-------~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v- 75 (598)
T 2x8g_A 9 QWLRKTVD---SA--AVILFSKTTCPYCKKVKDVLAEA-------KIKHATIELDQLSNGSAIQKCLASFSKIETVPQM- 75 (598)
T ss_dssp HHHHHHHH---HC--SEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEE-
T ss_pred HHHHHHhc---cC--CEEEEECCCChhHHHHHHHHHHC-------CCCcEEEEcccCcchHHHHHHHHHHhCCceeCEE-
Confidence 56667665 22 36679999999999998888754 345556666542 12222 134577899987
Q ss_pred EEeCCC
Q 012452 434 FFPKHS 439 (463)
Q Consensus 434 ~f~~g~ 439 (463)
|-+|+
T Consensus 76 -~i~g~ 80 (598)
T 2x8g_A 76 -FVRGK 80 (598)
T ss_dssp -EETTE
T ss_pred -EECCE
Confidence 44555
No 356
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=84.35 E-value=13 Score=29.96 Aligned_cols=81 Identities=10% Similarity=0.066 Sum_probs=63.1
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhc-CCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCH
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLA-GNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDV 452 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~-~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~ 452 (463)
....|.|..-+.++.....+.++.+.+. +..+.+=-||+.++ ++++ +.++|-.+||++=....- .-...| .--.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~~~y~LeVIDv~eq-PeLA-E~~~IvATPTLIK~~P~P--~rriiG-d~i~ 87 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEATVPISLQVINVADQ-PQLV-EYYRLVVTPALVKIGPGS--RQVLSG-IDLT 87 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCSSCEEEEEEETTTC-HHHH-HHTTCCSSSEEEEEESSS--CEEEES-SCHH
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccCCceEEEEeecccC-HHHH-hHcCeeeccHhhccCCCC--ceEEeC-hHHH
Confidence 4447888888999998888888877766 55789999999999 9999 999999999998765543 234444 4556
Q ss_pred HHHHHHH
Q 012452 453 DSLMAFV 459 (463)
Q Consensus 453 ~~L~~fI 459 (463)
++|..|.
T Consensus 88 ~ql~~ww 94 (105)
T 1t4y_A 88 DQLANQL 94 (105)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777765
No 357
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=83.04 E-value=1.3 Score=39.83 Aligned_cols=43 Identities=12% Similarity=0.242 Sum_probs=33.5
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+.+ .+++|.++||++++.+|+. ...+.| ..+.+.|.++|+++
T Consensus 166 ~~~a-~~~gv~g~Pt~~i~~~G~~-~~~~~G-~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 166 FQRV-AQWGISGFPALVVESGTDR-YLITTG-YRPIEALRQLLDTW 208 (216)
T ss_dssp HHHH-HHTTCCSSSEEEEEETTEE-EEEESS-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCcccceEEEEECCEE-EEeccC-CCCHHHHHHHHHHH
Confidence 5667 7899999999999888872 224555 68899999998764
No 358
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=79.03 E-value=2 Score=35.98 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=26.5
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 415 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~ 415 (463)
++.|+.++|+.|++....|++. ++.+-.+|++.+
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCceEEEEccCC
Confidence 5678899999999988877752 467777788654
No 359
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=73.94 E-value=3.5 Score=33.96 Aligned_cols=34 Identities=12% Similarity=0.231 Sum_probs=26.3
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 415 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~ 415 (463)
+..|+.|+|++|++....|++. ++.|-.+|+.++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 35 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH-------DVVFQEHNIMTS 35 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEETTTS
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-------CCCeEEEecccC
Confidence 5678899999999988777642 477788888654
No 360
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=72.07 E-value=6 Score=32.46 Aligned_cols=36 Identities=17% Similarity=0.439 Sum_probs=28.9
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEc
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRA 412 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~ 412 (463)
|.++|.|.-|.|+-|......+.+ +.+ ...+..||+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~----led-eY~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEE----LKS-EYDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHT----TTT-TEEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHH----hhc-cccEEEEEe
Confidence 568999999999999988777744 444 578888886
No 361
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=68.39 E-value=6.7 Score=32.26 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=26.8
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 415 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~ 415 (463)
.+..|+.|+|+.|++....|++- ++.|-.+|+.++
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 38 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDDL-------AWDYDAIDIKKN 38 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHHH-------TCCEEEEETTTS
T ss_pred eEEEEeCCCChHHHHHHHHHHHc-------CCceEEEEeccC
Confidence 35668899999999988777642 477778888665
No 362
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=67.34 E-value=4.1 Score=33.10 Aligned_cols=33 Identities=12% Similarity=-0.031 Sum_probs=25.1
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 414 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~ 414 (463)
++.|+.|+|+.|++....|++. ++.|-.+|+.+
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~-------gi~~~~~di~~ 34 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH-------KVAYDFHDYKA 34 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-------TCCEEEEEHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC-------CCceEEEeecC
Confidence 4578899999999988777652 46777777754
No 363
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=65.95 E-value=5.2 Score=35.28 Aligned_cols=41 Identities=17% Similarity=0.217 Sum_probs=30.6
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
...+ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+.+
T Consensus 142 ~~~a-~~~gv~GtPtfvv--ng~~-~v~~~G-a~~~e~~~~~i~~l 182 (185)
T 3feu_A 142 KMLS-EKSGISSVPTFVV--NGKY-NVLIGG-HDDPKQIADTIRYL 182 (185)
T ss_dssp HHHH-HHHTCCSSSEEEE--TTTE-EECGGG-CSSHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EEecCC-CCCHHHHHHHHHHH
Confidence 4567 7899999999986 5652 234455 68899998888765
No 364
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=64.13 E-value=6.5 Score=34.29 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=29.0
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
..++ ++++|.++||+++ +|+ . +.| ..+.+.|.++|+.+
T Consensus 139 ~~~a-~~~gv~GtPt~vv--nG~--~--~~G-~~~~~~l~~~i~~~ 176 (186)
T 3bci_A 139 KKIA-KDNHIKTTPTAFI--NGE--K--VED-PYDYESYEKLLKDK 176 (186)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE--E--CSC-TTCHHHHHHHHHC-
T ss_pred HHHH-HHcCCCCCCeEEE--CCE--E--cCC-CCCHHHHHHHHHHH
Confidence 4567 7899999999987 554 2 345 68899999998764
No 365
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=58.72 E-value=30 Score=35.63 Aligned_cols=77 Identities=12% Similarity=0.057 Sum_probs=53.0
Q ss_pred CCCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCC
Q 012452 370 RQEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSER 449 (463)
Q Consensus 370 ~~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~ 449 (463)
-.++|.+.++..-|..|.++...++++++. .+ ++.+.. + +.. . ...|++.+..+|+...+.|.| -
T Consensus 17 ~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~-~i~~~~-~-~~~-------~---~~~p~~~~~~~~~~~~i~f~g-~ 81 (521)
T 1hyu_A 17 LTKPVELIATLDDSAKSAEIKELLAEIAEL-SD-KVTFKE-D-NTL-------P---VRKPSFLITNPGSQQGPRFAG-S 81 (521)
T ss_dssp CCSCEEEEEECCSSHHHHHHHHHHHHHHTT-CT-TEEEEE-C-TTS-------S---SCSSEEEEECTTCCCSCEEES-C
T ss_pred CCCCEEEEEEeCCCcchHHHHHHHHHHHHh-CC-ceEEEE-c-CCc-------c---cCCCEEEEecCCCcceEEEec-c
Confidence 467888888888899999999999998754 44 466532 2 111 1 468999999877655677766 3
Q ss_pred CCHHHHHHHHHH
Q 012452 450 RDVDSLMAFVDA 461 (463)
Q Consensus 450 ~~~~~L~~fI~~ 461 (463)
..-.++..||..
T Consensus 82 p~g~e~~s~~~~ 93 (521)
T 1hyu_A 82 PLGHEFTSLVLA 93 (521)
T ss_dssp CCGGGHHHHHHH
T ss_pred CcchhHHHHHHH
Confidence 444556666654
No 366
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=58.62 E-value=7.1 Score=32.10 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=26.0
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 415 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~ 415 (463)
+..|+.|+|+.|++....|++- ++.|-.+|+.++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-------gi~~~~~di~~~ 39 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN-------NIEYTNRLIVDD 39 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETTTT
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCceEEEecccC
Confidence 5678899999999988777642 477777887655
No 367
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=56.82 E-value=5.3 Score=34.88 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=29.0
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+.+ ++++|.++||+++ +|+. .+...| ..+.+.|.+.|+.+
T Consensus 152 ~~~a-~~~gv~gtPt~~i--ng~~-~~~~~g-~~~~~~l~~~i~~~ 192 (195)
T 3c7m_A 152 KASY-DVAKIQGVPAYVV--NGKY-LIYTKS-IKSIDAMADLIREL 192 (195)
T ss_dssp GGHH-HHHHHHCSSEEEE--TTTE-EECGGG-CCCHHHHHHHHHHH
T ss_pred HHHH-HHcCCCccCEEEE--CCEE-EeccCC-CCCHHHHHHHHHHH
Confidence 4566 7889999999765 6652 222223 67899999998865
No 368
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=54.70 E-value=26 Score=28.26 Aligned_cols=64 Identities=14% Similarity=0.233 Sum_probs=44.7
Q ss_pred HHHHHHHHHH---hcCCCeEEEEEEcCCCcH----------HHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHH
Q 012452 390 EGSYVELADK---LAGNGVKVGKFRADGDQK----------EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLM 456 (463)
Q Consensus 390 ~p~l~~la~~---~~~~~v~f~~VD~d~~~~----------~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~ 456 (463)
.|.+-+++.. ++..++.+.+.|...+ + ++. +++++..+|.++ -+|+ +...|...+.++|.
T Consensus 26 d~eL~~~~~~~~~lk~~Gi~V~RyNL~~~-P~~F~~N~~V~~~L-~~~G~~~LP~~~--VDGe---vv~~G~yPt~eEl~ 98 (106)
T 3ktb_A 26 NPELMRIAVVIESLKKQGIIVTRHNLRDE-PQVYVSNKTVNDFL-QKHGADALPITL--VDGE---IAVSQTYPTTKQMS 98 (106)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCEEEETTTC-TTHHHHSHHHHHHH-HTTCGGGCSEEE--ETTE---EEECSSCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCEEEEEccccC-hHHHhcCHHHHHHH-HHcCcccCCEEE--ECCE---EEEeccCCCHHHHH
Confidence 4444444433 3334799999999887 4 566 689999999886 4666 44445468899999
Q ss_pred HHHH
Q 012452 457 AFVD 460 (463)
Q Consensus 457 ~fI~ 460 (463)
+|+.
T Consensus 99 ~~lg 102 (106)
T 3ktb_A 99 EWTG 102 (106)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9873
No 369
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=54.40 E-value=23 Score=31.37 Aligned_cols=39 Identities=15% Similarity=0.333 Sum_probs=29.3
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEE
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFR 411 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD 411 (463)
...|..|+...||+|....+.+.++.+.... ++.|....
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~-~v~v~~~~ 45 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQEYSA-FLTVKIMP 45 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHhcCCC-CeEEEEee
Confidence 3567888899999999999999999884332 46665544
No 370
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=54.14 E-value=14 Score=32.63 Aligned_cols=38 Identities=24% Similarity=0.292 Sum_probs=27.2
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
...+ ++++|.++||+++ +|+ .+. |+. +.+.|.+.|+.+
T Consensus 144 ~~~a-~~~gv~gtPt~vv--ng~--~~~--~~~-~~e~l~~~i~~l 181 (193)
T 3hz8_A 144 QELT-ETFQIDGVPTVIV--GGK--YKV--EFA-DWESGMNTIDLL 181 (193)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT--EEE--CCS-SHHHHHHHHHHH
T ss_pred HHHH-HHhCCCcCCEEEE--CCE--EEe--cCC-CHHHHHHHHHHH
Confidence 4567 7899999999986 565 222 223 888888887754
No 371
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=51.89 E-value=8 Score=32.81 Aligned_cols=78 Identities=9% Similarity=0.032 Sum_probs=42.8
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCc---HHHHHHcCCCCCCCEEEEEeCCCcCeee--cCCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQ---KEYAKQKLQLGSFPTILFFPKHSSKPIK--YPSER 449 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~---~~l~~~~~~I~~~PTi~~f~~g~~~~~~--y~gg~ 449 (463)
+..|+.|+|+.|++....|++- ++.|-.+|+..+. .++. .-++-.++|.--++......... .....
T Consensus 4 itiY~~p~C~~crkak~~L~~~-------gi~~~~idi~~~~~~~~eL~-~~~~~~g~p~~~l~n~~~~~yk~l~l~~~~ 75 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS-------GTEPTIILYLENPPSRDELV-KLIADMGISVRALLRKNVEPYEQLGLAEDK 75 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-------TCCCEEECTTTSCCCHHHHH-HHHHHHTSCHHHHBCSSSHHHHHTTTTSSC
T ss_pred EEEEECCCChHHHHHHHHHHHc-------CCCEEEEECCCCCccHHHHH-HHhcccCCCHHHhccCCchhHHhcCCcccc
Confidence 4567899999999988777651 4777778886641 2222 22333455644445444321110 11112
Q ss_pred CCHHHHHHHHH
Q 012452 450 RDVDSLMAFVD 460 (463)
Q Consensus 450 ~~~~~L~~fI~ 460 (463)
.+.+++.+.+.
T Consensus 76 ls~~~~~~lm~ 86 (141)
T 1s3c_A 76 FTDDQLIDFML 86 (141)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 56666666554
No 372
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=49.77 E-value=13 Score=32.75 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=26.8
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeee-cCCCCCCHHHHHHHH
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIK-YPSERRDVDSLMAFV 459 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~-y~gg~~~~~~L~~fI 459 (463)
.+.+ ++++|.++||+++ +|+ .+. ..| ..+.+++.++|
T Consensus 144 ~~~a-~~~GV~gtPtf~i--ng~--~~~~~s~-~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYA-RQNGIHVSPTFMI--NGL--VQPGMSS-GDPVSKWVSDI 181 (182)
T ss_dssp HHHH-HHHTCCSSSEEEE--TTE--ECTTCCT-TSCHHHHHHHH
T ss_pred HHHH-HHCCCCccCEEEE--CCE--EccCCCC-CCCHHHHHHHh
Confidence 3556 7889999999986 565 332 334 68888888876
No 373
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=49.56 E-value=7.7 Score=31.92 Aligned_cols=34 Identities=9% Similarity=0.090 Sum_probs=25.7
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGD 415 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~ 415 (463)
+..|+.|+|+.|++....|++ .++.|-.+|+.++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~-------~gi~~~~~di~~~ 40 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ-------QGITPQVVLYLET 40 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT-------TTCCCEEECTTTS
T ss_pred EEEEECCCCHHHHHHHHHHHH-------cCCCcEEEeeccC
Confidence 566889999999998766653 2577778888765
No 374
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=46.59 E-value=6.1 Score=31.85 Aligned_cols=60 Identities=8% Similarity=-0.070 Sum_probs=48.0
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 433 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~ 433 (463)
..++..|-|-.-+-++.....+.++.+.+-+..+.+=-||+.++ ++++ +.++|-.+||++
T Consensus 7 ~~~L~LyVaG~tp~S~~ai~nL~~i~e~~l~~~y~LeVIDv~~~-PelA-e~~~IvAtPTLi 66 (105)
T 1wwj_A 7 TYVLKLYVAGNTPNSVRALKMLKNILEQEFQGVYALKVIDVLKN-PQLA-EEDKILATPTLA 66 (105)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTSEEEEEEETTTC-CSCC-TTCEEECHHHHG
T ss_pred ceEEEEEEeCCCchHHHHHHHHHHHHHHhcCCCeEEEEEEcccC-HhHH-hHCCeEEechhh
Confidence 34555555558888988888888876665554899999999999 9999 899999999986
No 375
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=46.10 E-value=25 Score=28.54 Aligned_cols=64 Identities=13% Similarity=0.269 Sum_probs=43.4
Q ss_pred HHHHHHHHHH---hcCCCeEEEEEEcCCCcH----------HHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHH
Q 012452 390 EGSYVELADK---LAGNGVKVGKFRADGDQK----------EYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLM 456 (463)
Q Consensus 390 ~p~l~~la~~---~~~~~v~f~~VD~d~~~~----------~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~ 456 (463)
.|.+-+++.. ++.+++.+.+.|...+ + ++. +++++..+|.++ -+|+ +...|...+.++|.
T Consensus 23 d~~L~~~~~~~~~lk~~Gi~V~RyNL~~~-P~aF~~N~~V~~~L-~~~G~~~LP~~~--VDGe---vv~~G~yPt~eEl~ 95 (110)
T 3kgk_A 23 DQALVDFSTDVQWLKQSGVQIERFNLAQQ-PMSFVQNEKVKAFI-EASGAEGLPLLL--LDGE---TVMAGRYPKRAELA 95 (110)
T ss_dssp -CHHHHHHHHHHHHHHHTCCEEEEETTTC-TTHHHHSHHHHHHH-HHHCGGGCCEEE--ETTE---EEEESSCCCHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCeEEEEccccC-hHHHhcCHHHHHHH-HHcCcccCCEEE--ECCE---EEEeccCCCHHHHH
Confidence 3444444333 3334699999999887 4 556 678999999886 4666 33344467899999
Q ss_pred HHHH
Q 012452 457 AFVD 460 (463)
Q Consensus 457 ~fI~ 460 (463)
+|+.
T Consensus 96 ~~lg 99 (110)
T 3kgk_A 96 RWFG 99 (110)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9874
No 376
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=45.18 E-value=19 Score=31.55 Aligned_cols=20 Identities=5% Similarity=0.225 Sum_probs=16.2
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCC
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
...+ ++++|.++||+++ +|+
T Consensus 135 ~~~a-~~~gv~GtPt~~v--ng~ 154 (189)
T 3l9v_A 135 ERLF-KEYGVRGTPSVYV--RGR 154 (189)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHhCCCccCEEEE--CCE
Confidence 4566 7899999999986 565
No 377
>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}
Probab=43.74 E-value=72 Score=27.87 Aligned_cols=59 Identities=10% Similarity=0.149 Sum_probs=39.4
Q ss_pred cEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCC
Q 012452 373 PWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 373 ~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
+.+..||.++|+.|....=.++.. +-.+.+..||.....+++. ...-...+|++. .+|.
T Consensus 5 ~~~~Ly~~~~sp~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~--~~g~ 63 (216)
T 3lyk_A 5 SVMTLFSNKDDIYCHQVKIVLAEK-----GVLYENAEVDLQALPEDLM-ELNPYGTVPTLV--DRDL 63 (216)
T ss_dssp -CEEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE--ETTE
T ss_pred ceEEEEeCCCChhHHHHHHHHHHc-----CCCcEEEeCCcccCcHHHH-hhCCCCCcCeEE--ECCe
Confidence 457788999999999866554433 3246667777654435666 566677899997 4443
No 378
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=42.62 E-value=27 Score=32.04 Aligned_cols=39 Identities=8% Similarity=0.134 Sum_probs=28.7
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+.+ .+++|.++||+++ +|+ ..+.| ..+.+.|.+.|+++
T Consensus 173 ~~~a-~~~Gv~GvPtfvv--~g~---~~v~G-a~~~e~~~~~i~~~ 211 (239)
T 3gl5_A 173 EREA-AQLGATGVPFFVL--DRA---YGVSG-AQPAEVFTQALTQA 211 (239)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT---EEEES-SCCHHHHHHHHHHH
T ss_pred HHHH-HHCCCCeeCeEEE--CCc---EeecC-CCCHHHHHHHHHHH
Confidence 4456 6899999999986 554 23345 68899998888764
No 379
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=42.08 E-value=19 Score=32.23 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=26.8
Q ss_pred HcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 422 QKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 422 ~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
++++|.++||+++ +|+ .+.| ..+.+.|.+.|+++
T Consensus 162 ~~~GV~GtPtfvv--ng~----~~~G-~~~~e~l~~~i~~~ 195 (205)
T 3gmf_A 162 NQYNVSGTPSFMI--DGI----LLAG-THDWASLRPQILAR 195 (205)
T ss_dssp HHHCCCSSSEEEE--TTE----ECTT-CCSHHHHHHHHHHH
T ss_pred HHcCCccCCEEEE--CCE----EEeC-CCCHHHHHHHHHHH
Confidence 4789999999987 554 2455 78999999999864
No 380
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=38.89 E-value=18 Score=31.96 Aligned_cols=38 Identities=13% Similarity=0.108 Sum_probs=28.4
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHHh
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDAL 462 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~l 462 (463)
.+.+ .+++|.++||+++ +|+ .+.| ....+.|.+.|++.
T Consensus 157 ~~~a-~~~Gv~G~Ptfvi--~g~----~~~G-~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 157 THAA-IERKVFGVPTMFL--GDE----MWWG-NDRLFMLESAMGRL 194 (203)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHHH
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEEC-CCCHHHHHHHHhcc
Confidence 4566 7899999999987 453 3445 67888888888764
No 381
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=38.19 E-value=18 Score=29.56 Aligned_cols=33 Identities=12% Similarity=0.156 Sum_probs=24.1
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 414 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~ 414 (463)
+..|+.|+|+.|++....+++ . ++.|-.+|+.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~-----~--gi~~~~~di~~ 38 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN-----Q--GIAPQVIKYLE 38 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH-----T--TCCCEEECHHH
T ss_pred EEEEECCCChHHHHHHHHHHH-----c--CCceEEEEecc
Confidence 566789999999998877764 1 46666677643
No 382
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=37.72 E-value=14 Score=29.23 Aligned_cols=21 Identities=10% Similarity=0.077 Sum_probs=18.5
Q ss_pred EEeCccCcHHHHHHHHHhCCC
Q 012452 253 WNPVANVKGNDIWNFLRTMDV 273 (463)
Q Consensus 253 ~~PI~dWt~~DVw~yi~~~~l 273 (463)
-.|+..|+.+||..|++..++
T Consensus 14 ~~~v~~Ws~edV~~WL~~~Gl 34 (97)
T 2d8c_A 14 MKEVVYWSPKKVADWLLENAM 34 (97)
T ss_dssp CSCCSSCCTTHHHHHHHHTTC
T ss_pred CCchhhCCHHHHHHHHHHcCC
Confidence 358899999999999999875
No 383
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=37.61 E-value=18 Score=32.13 Aligned_cols=20 Identities=20% Similarity=0.388 Sum_probs=15.7
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCC
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
...+ +.++|.++||+++ +|+
T Consensus 40 ~~~a-~~~gi~gvP~fvi--ngk 59 (197)
T 1un2_A 40 EKAA-ADVQLRGVPAMFV--NGK 59 (197)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHcCCCcCCEEEE--cce
Confidence 4566 7899999999976 555
No 384
>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}
Probab=37.23 E-value=86 Score=27.93 Aligned_cols=61 Identities=11% Similarity=0.103 Sum_probs=41.0
Q ss_pred CCcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCC-CCCCEEEEEeCCC
Q 012452 371 QEPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL-GSFPTILFFPKHS 439 (463)
Q Consensus 371 ~k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I-~~~PTi~~f~~g~ 439 (463)
.+..+..||.+.|+.|....-.++.. +-.+.+..||.....+++. +..-. ..+|++. .+|.
T Consensus 9 ~~~~~~Ly~~~~sp~~~~vr~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~nP~~g~vPvL~--~~g~ 70 (231)
T 4dej_A 9 KRSVMTLYSGKDDLKSHQVRLVLAEK-----GVGVEITYVTDESTPEDLL-QLNPYPEAKPTLV--DREL 70 (231)
T ss_dssp CCSSCEEEECSSCHHHHHHHHHHHHH-----TCBCEEEECCSSCCCHHHH-HHCCSSSCCSEEE--ETTE
T ss_pred CCceEEEEcCCCChHHHHHHHHHHHc-----CCCcEEEEcCcccCCHHHH-HhCCCCCCCCEEE--ECCE
Confidence 45567788999999999876555543 3235666677654435666 55666 7899997 4443
No 385
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=36.96 E-value=24 Score=31.05 Aligned_cols=20 Identities=25% Similarity=0.424 Sum_probs=16.2
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCC
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
...+ ++++|.++||+++ +|+
T Consensus 141 ~~~a-~~~gv~gtPtfvv--nG~ 160 (191)
T 3l9s_A 141 EKAA-ADLQLQGVPAMFV--NGK 160 (191)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTT
T ss_pred HHHH-HHhCCcccCEEEE--CCE
Confidence 4566 7899999999986 566
No 386
>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*
Probab=32.10 E-value=64 Score=28.77 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=19.3
Q ss_pred cCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCC
Q 012452 380 APWCQFCQAMEGSYVELADKLAGNGVKVGKFRADG 414 (463)
Q Consensus 380 A~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~ 414 (463)
.+|||+|.+..=.|. +++-.+....||..+
T Consensus 19 ~~~SP~~~kvr~~L~-----~kgi~y~~~~v~~~~ 48 (253)
T 4f03_A 19 SPWSPNTWKIRYALN-----YKGLKYKTEWVEYPD 48 (253)
T ss_dssp CCCCHHHHHHHHHHH-----HHTCCEEEEECCGGG
T ss_pred CCcChhHHHHHHHHH-----HcCCCCEEEEEcccc
Confidence 789999999764444 444235556666543
No 387
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=31.48 E-value=1.4e+02 Score=26.84 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=35.5
Q ss_pred ecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHH
Q 012452 379 YAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 458 (463)
Q Consensus 379 yA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~f 458 (463)
+.++|++|+...-.+++. +-.+.+..+|.....+++. +..-...+|++. .+|. .- .+...|..+
T Consensus 26 ~~~~sp~~~rv~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~nP~g~vP~L~--~~g~---~l-----~ES~aI~~Y 89 (247)
T 2r4v_A 26 SIGNCPFCQRLFMILWLK-----GVKFNVTTVDMTRKPEELK-DLAPGTNPPFLV--YNKE---LK-----TDFIKIEEF 89 (247)
T ss_dssp SBCSCHHHHHHHHHHHHH-----TCCCEEEEECCC-----------CCSSSCEEE--ETTE---EE-----CCHHHHHHH
T ss_pred cCCCChhHHHHHHHHHHc-----CCCcEEEEcCcccchHHHH-HhCCCCCCCEEE--ECCE---ec-----cCHHHHHHH
Confidence 688999999876555542 3235566666543313444 344467899887 4443 11 234566666
Q ss_pred HHH
Q 012452 459 VDA 461 (463)
Q Consensus 459 I~~ 461 (463)
|.+
T Consensus 90 L~~ 92 (247)
T 2r4v_A 90 LEQ 92 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 388
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=31.42 E-value=12 Score=27.64 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=18.2
Q ss_pred EeCccCcHHHHHHHHHhCCC
Q 012452 254 NPVANVKGNDIWNFLRTMDV 273 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~~l 273 (463)
.|+.+|+.+||-.|+...++
T Consensus 2 ~~v~~Ws~~~V~~WL~~~gl 21 (74)
T 2gle_A 2 HMVHEWSVQQVSHWLVGLSL 21 (74)
T ss_dssp CCGGGCCSGGGHHHHHHTTT
T ss_pred CCcccCCHHHHHHHHHHCCC
Confidence 38899999999999999986
No 389
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=30.60 E-value=1.7e+02 Score=26.12 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=30.7
Q ss_pred CChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012452 382 WCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 433 (463)
Q Consensus 382 wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~ 433 (463)
.|++|+...-.+.. .+-.+....||.....+++. +..-...+|++.
T Consensus 23 ~sp~~~rv~~~L~~-----~gi~ye~~~v~~~~~~~~~~-~~nP~g~VPvL~ 68 (241)
T 1k0m_A 23 NCPFSQRLFMVLWL-----KGVTFNVTTVDTKRRTETVQ-KLCPGGELPFLL 68 (241)
T ss_dssp SCHHHHHHHHHHHH-----HTCCCEEEEECTTSCCHHHH-HHCTTCCSSEEE
T ss_pred CCHHHHHHHHHHHH-----cCCccEEEEcCCcccHHHHH-HhCCCCCCCEEE
Confidence 89999987655554 23245667777654325666 556678899986
No 390
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=30.33 E-value=15 Score=27.38 Aligned_cols=18 Identities=17% Similarity=0.170 Sum_probs=16.4
Q ss_pred EeCccCcHHHHHHHHHhC
Q 012452 254 NPVANVKGNDIWNFLRTM 271 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~ 271 (463)
.|+..||.+||-.|+...
T Consensus 1 k~v~~Wt~~~V~~WL~~~ 18 (78)
T 3bs7_A 1 KAVYLWTVSDVLKWYRRH 18 (78)
T ss_dssp CCGGGCCHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHH
Confidence 388999999999999996
No 391
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=29.59 E-value=25 Score=27.22 Aligned_cols=20 Identities=25% Similarity=0.564 Sum_probs=17.4
Q ss_pred EeCccCcHHHHHHHHHhC-CC
Q 012452 254 NPVANVKGNDIWNFLRTM-DV 273 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~-~l 273 (463)
.|+..|+.+||..|+... |+
T Consensus 12 ~~v~~Ws~edV~~wL~~l~gl 32 (89)
T 1kw4_A 12 PPISSWSVDDVSNFIRELPGC 32 (89)
T ss_dssp CCGGGCCHHHHHHHHHTSTTC
T ss_pred CCchhCCHHHHHHHHHHCcCh
Confidence 388999999999999987 43
No 392
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=28.90 E-value=3.1e+02 Score=25.49 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=42.8
Q ss_pred HHHHHHHHHHcCC-cEEEEechhHHHHHHHHHH---HcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEc
Q 012452 100 LEIMDRALEKFGN-DIAIAFSGAEDVALIEYAH---LTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMF 170 (463)
Q Consensus 100 ~eil~~~~~~~~~-~i~vafSGGKDS~vl~L~~---~~~~~i~vi~~DTg~~fpeT~~~~~~~~~~~gl~i~~~~ 170 (463)
..|-+.+.+...+ ..+++++.+ ++++.+++ +.++++.|+..+|-..++. ...+.++.+ .|+++.++.
T Consensus 97 ~~Ia~~a~~~I~~g~~IlT~~~s--~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG-~~~a~~L~~-~gI~vtli~ 167 (276)
T 1vb5_A 97 RELASIGAQLIDDGDVIITHSFS--STVLEIIRTAKERKKRFKVILTESSPDYEG-LHLARELEF-SGIEFEVIT 167 (276)
T ss_dssp HHHHHHHHHHCCTTEEEECCSCC--HHHHHHHHHHHHTTCCEEEEEECCTTTTHH-HHHHHHHHH-TTCCEEEEC
T ss_pred HHHHHHHHHHccCCCEEEEeCCC--hHHHHHHHHHHHcCCeEEEEEeCCCcchhh-HHHHHHHHH-CCCCEEEEc
Confidence 3444555666653 355556543 35554443 3477899887787776665 777777776 699988773
No 393
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=28.89 E-value=2.1e+02 Score=26.09 Aligned_cols=67 Identities=16% Similarity=0.132 Sum_probs=41.0
Q ss_pred ecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHH
Q 012452 379 YAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAF 458 (463)
Q Consensus 379 yA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~f 458 (463)
+.++|++|+...-.+++ .+-.+.+..+|.....+++. +..-...+|++. .+|. +- .+...|..+
T Consensus 31 ~~~~~p~~~rv~~~L~~-----~gi~ye~~~v~~~~~~~~~~-~~nP~gkVPvL~--~~g~---~l-----~ES~aI~~Y 94 (267)
T 2ahe_A 31 SIGNCPFSQRLFMILWL-----KGVVFSVTTVDLKRKPADLQ-NLAPGTHPPFIT--FNSE---VK-----TDVNKIEEF 94 (267)
T ss_dssp SBCSCHHHHHHHHHHHH-----HTCCCEEEEECTTSCCHHHH-HHSTTCCSCEEE--ETTE---EE-----CCHHHHHHH
T ss_pred CCCCCchHHHHHHHHHH-----cCCCCEEEEeCcccChHHHH-HhCCCCCCCEEE--ECCE---Ee-----cCHHHHHHH
Confidence 57899999986655554 23235666777654325565 555677899987 3443 11 234567777
Q ss_pred HHH
Q 012452 459 VDA 461 (463)
Q Consensus 459 I~~ 461 (463)
|.+
T Consensus 95 L~~ 97 (267)
T 2ahe_A 95 LEE 97 (267)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 394
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=28.65 E-value=1e+02 Score=26.71 Aligned_cols=57 Identities=11% Similarity=0.184 Sum_probs=36.8
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
+-.|+.+.||+|++..=.+++ .+-.+.+..||......++. +..-...+|++. .+|.
T Consensus 4 m~LY~~~~sP~~~rvr~~L~e-----~gi~~e~~~v~~~~~~~~~~-~~nP~g~vPvL~--~~~~ 60 (210)
T 4hoj_A 4 MTLYSGITCPFSHRCRFVLYE-----KGMDFEIKDIDIYNKPEDLA-VMNPYNQVPVLV--ERDL 60 (210)
T ss_dssp CEEEECTTCHHHHHHHHHHHH-----HTCCCEEEECCTTSCCHHHH-HHCTTCCSCEEE--ETTE
T ss_pred EEEecCCCChHHHHHHHHHHH-----cCCCCEEEEeCCCCCCHHHH-HHCCCCCCcEEE--ECCE
Confidence 345778999999986644443 23245667777665424555 555677899986 4443
No 395
>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A
Probab=27.75 E-value=1.6e+02 Score=25.36 Aligned_cols=57 Identities=16% Similarity=0.222 Sum_probs=35.0
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
+..||.+.|+.|....=.++.. +-.+....||.....+++. +..-...+|++. .+|.
T Consensus 9 ~~Ly~~~~s~~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~--~~g~ 65 (215)
T 3lyp_A 9 LACYSDPADHYSHRVRIVLAEK-----GVSAEIISVEAGRQPPKLI-EVNPYGSLPTLV--DRDL 65 (215)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECC---CCHHHH-HHCTTCCSSEEE--CC-C
T ss_pred eEEEeCCCCchHHHHHHHHHHC-----CCCcEEEecCcccccHHHH-HHCCCCCcCeEE--ECCE
Confidence 5668889999999876555443 3235556666554325666 566678899986 4443
No 396
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=27.06 E-value=30 Score=25.99 Aligned_cols=22 Identities=14% Similarity=0.179 Sum_probs=19.0
Q ss_pred EEeCccCcHHHHHHHHHhCCCC
Q 012452 253 WNPVANVKGNDIWNFLRTMDVP 274 (463)
Q Consensus 253 ~~PI~dWt~~DVw~yi~~~~lp 274 (463)
-.|+..|+.+||-.++...|++
T Consensus 4 ~~~v~~Ws~~~V~~WL~~lgl~ 25 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHLSLC 25 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHTTCG
T ss_pred CCChhhCCHHHHHHHHHHCCCH
Confidence 3589999999999999999864
No 397
>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*
Probab=26.28 E-value=1.7e+02 Score=25.56 Aligned_cols=53 Identities=11% Similarity=0.091 Sum_probs=34.5
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEE
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 434 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~ 434 (463)
+..+|.++|++|....-.++. .+-.+....|+-+.. +++. .......+|++..
T Consensus 3 ~~Ly~~~~sp~~~~v~~~L~~-----~gi~ye~~~v~~~~~-~~~~-~~~P~g~vP~L~~ 55 (229)
T 3lxz_A 3 LKLYGFSVSNYYNMVKLALLE-----KGLTFEEVTFYGGQA-PQAL-EVSPRGKVPVLET 55 (229)
T ss_dssp EEEEECTTCHHHHHHHHHHHH-----TTCCEEEEECCCCSC-HHHH-TTSTTSCSCEEEE
T ss_pred EEEEeCCCCchHHHHHHHHHH-----cCCCCEEEecCCCCC-HHHH-hhCCCCCcCeEEe
Confidence 567889999999886654443 332345555544444 6666 5666778999863
No 398
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=25.59 E-value=45 Score=29.35 Aligned_cols=37 Identities=11% Similarity=0.124 Sum_probs=27.7
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHHH
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVDA 461 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~~ 461 (463)
.+.+ .+++|.++||+++ +|+ .+.| ....+.|.++|..
T Consensus 163 ~~~a-~~~Gv~GvPtfvv--~g~----~~~G-~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 163 GEDA-VARGIFGSPFFLV--DDE----PFWG-WDRMEMMAEWIRT 199 (202)
T ss_dssp HHHH-HHTTCCSSSEEEE--TTE----EEES-GGGHHHHHHHHHT
T ss_pred HHHH-HHCCCCcCCEEEE--CCE----EEec-CCCHHHHHHHHhc
Confidence 4556 6889999999987 443 3455 6788888888864
No 399
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=25.55 E-value=1e+02 Score=26.85 Aligned_cols=52 Identities=12% Similarity=0.211 Sum_probs=34.9
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 433 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~ 433 (463)
+..|+.+.|++|....-.+++. +-.+....||.... .... +......+|++.
T Consensus 4 ~~Ly~~~~sp~~~~v~~~l~~~-----gi~~~~~~v~~~~~-~~~~-~~~p~~~vP~l~ 55 (218)
T 3ir4_A 4 MKLYIYDHCPFCVKARMIFGLK-----NIPVELNVLQNDDE-ATPT-RMIGQKMVPILQ 55 (218)
T ss_dssp CEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTCC-HHHH-HHHSSSCSCEEE
T ss_pred EEEEcCCCCchHHHHHHHHHHc-----CCceEEEECCCcch-hhhh-hcCCCceeeeEE
Confidence 4568889999999876555433 32456677777655 4444 455667899986
No 400
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=25.42 E-value=86 Score=27.33 Aligned_cols=36 Identities=8% Similarity=0.088 Sum_probs=27.9
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEE
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKF 410 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~V 410 (463)
.|.+|+-.-||+|-...+.++++.+.+.- .|.+--+
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~~-~v~~~p~ 37 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYGL-TIRYNAI 37 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCC-EEEEEEC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence 36778889999999999999999999853 3444333
No 401
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=24.99 E-value=1.7e+02 Score=27.34 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHc-CCcEEEEechhHH--HHHHHHHHHcCCCeEEEEEeC-CC--CcHHHHHHHHHHHH---HhCCc
Q 012452 98 SPLEIMDRALEKF-GNDIAIAFSGAED--VALIEYAHLTGRPFRVFSLDT-GR--LNPETYRFFDEVEK---HFGIR 165 (463)
Q Consensus 98 ~a~eil~~~~~~~-~~~i~vafSGGKD--S~vl~L~~~~~~~i~vi~~DT-g~--~fpeT~~~~~~~~~---~~gl~ 165 (463)
+--+.++.+++.+ |..++-+.||++| -.++.++.+.+.++-+++.|. |. ...+..+++++..+ ++|++
T Consensus 86 ~~~~v~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~ 162 (271)
T 2yci_X 86 TNPDAIEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIP 162 (271)
T ss_dssp SCHHHHHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 4567888888887 4557778999988 667888999888888888763 32 23455666555433 45876
No 402
>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5
Probab=24.43 E-value=2.5e+02 Score=24.40 Aligned_cols=54 Identities=11% Similarity=-0.038 Sum_probs=33.4
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCC-CCCCEEE
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQL-GSFPTIL 433 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I-~~~PTi~ 433 (463)
-+..|+.++|+.|+...-.++.. +-.+....+|.....+++. +..-. ..+|++.
T Consensus 6 ~~~Ly~~~~sp~~~~v~~~L~~~-----gi~~e~~~v~~~~~~~~~~-~~nP~~g~vP~L~ 60 (230)
T 1gwc_A 6 DLKLLGAWPSPFVTRVKLALALK-----GLSYEDVEEDLYKKSELLL-KSNPVHKKIPVLI 60 (230)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHH-----TCCCEEEECCTTSCCHHHH-HHSTTTCCSCEEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHc-----CCCCeEEecccccCCHHHH-hhCCCCCccCEEE
Confidence 35678889999998866555432 3235566666543324554 33333 5799986
No 403
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=23.59 E-value=78 Score=28.25 Aligned_cols=40 Identities=13% Similarity=0.023 Sum_probs=0.0
Q ss_pred cHHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHH
Q 012452 416 QKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFV 459 (463)
Q Consensus 416 ~~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI 459 (463)
+.+.+ .+++|.++||+++=.+|. ...+.| ....+.|.++|
T Consensus 171 ~~~~a-~~~gv~G~Ptfvv~~~g~--~~~~~G-~~~~~~l~~~l 210 (226)
T 1r4w_A 171 TTGAA-CKYGAFGLPTTVAHVDGK--TYMLFG-SDRMELLAYLL 210 (226)
T ss_dssp HHHHH-HHTTCCSSCEEEEEETTE--EEEEES-TTCHHHHHHHH
T ss_pred HHHHH-HHCCCCCCCEEEEeCCCC--cCceeC-CCcHHHHHHHh
No 404
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=23.53 E-value=65 Score=29.20 Aligned_cols=40 Identities=10% Similarity=0.031 Sum_probs=28.8
Q ss_pred HHHHHHcCCCCCCCEEEEEeCCCcCeeecCCCCCCHHHHHHHHH
Q 012452 417 KEYAKQKLQLGSFPTILFFPKHSSKPIKYPSERRDVDSLMAFVD 460 (463)
Q Consensus 417 ~~l~~~~~~I~~~PTi~~f~~g~~~~~~y~gg~~~~~~L~~fI~ 460 (463)
.+.+ .+++|.++||+++=.+|+ ...+.| ....+.|.++|.
T Consensus 172 ~~~a-~~~Gv~GvPtfvv~~~g~--~~~f~G-~drl~~l~~~L~ 211 (234)
T 3rpp_A 172 TEAA-CRYGAFGLPITVAHVDGQ--THMLFG-SDRMELLAHLLG 211 (234)
T ss_dssp HHHH-HHTTCSSSCEEEEEETTE--EEEEES-SSCHHHHHHHHT
T ss_pred HHHH-HHcCCCCCCEEEEeCCCC--cCceeC-ccCHHHHHHHhc
Confidence 4556 678999999998723564 345666 677888888875
No 405
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}
Probab=22.58 E-value=2e+02 Score=25.58 Aligned_cols=55 Identities=7% Similarity=-0.096 Sum_probs=37.3
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEE
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 434 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~ 434 (463)
.+..||.++|+.|....=.++. .+-.+.+..||......++. +..-...+|++..
T Consensus 26 ~~~Ly~~~~sp~~~~v~~~L~~-----~gi~ye~~~v~~~~~~~~~~-~~nP~g~vP~L~~ 80 (246)
T 3rbt_A 26 KLRLYHVDMNPYGHRVLLVLEA-----KRIKYEVYRLDPLRLPEWFR-AKNPRLKIPVLEI 80 (246)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH-----TTBCEEEEECCSSSCCHHHH-HHCTTCBSCEEEE
T ss_pred ceEEEecCCCccHHHHHHHHHH-----cCCCceEEEeCcccCCHHHH-HhCCCCCCCEEEe
Confidence 4677889999999886655543 33245666677665424466 6666788999864
No 406
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=22.57 E-value=2.7e+02 Score=21.67 Aligned_cols=74 Identities=5% Similarity=-0.061 Sum_probs=47.8
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhc--CCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEE-eCCCcCeeecCCCCC
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLA--GNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFF-PKHSSKPIKYPSERR 450 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~--~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f-~~g~~~~~~y~gg~~ 450 (463)
-|...|-+|.+.++.+...++.-...++ +.++.|.. ... -..-|.+..+ .+|.+..+...+ .
T Consensus 21 ~l~~~yc~~~~sS~G~R~Fl~~~l~~~k~~NP~v~i~v---~~~----------~~~~P~i~a~Y~~G~ek~i~l~n--~ 85 (102)
T 1s3a_A 21 EIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILI---REC----------SDVQPKLWARYAFGQETNVPLNN--F 85 (102)
T ss_dssp EEEEECCSSSCCCHHHHHHHHHTHHHHHHHSTTCCEEE---ECC----------CSSSCEEEEEESSCCEEEEECTT--C
T ss_pred EEEEEEcCCCCCchhHHHHHHHhhHHHHHHCCCceEEE---EEC----------CCCCCEEEEEECCCCEEEEECCC--C
Confidence 5677888999888887776654333332 23466653 122 0357877765 566655566654 8
Q ss_pred CHHHHHHHHHHh
Q 012452 451 DVDSLMAFVDAL 462 (463)
Q Consensus 451 ~~~~L~~fI~~l 462 (463)
+.++|.+.|+.+
T Consensus 86 s~~eI~~~l~~l 97 (102)
T 1s3a_A 86 SADQVTRALENV 97 (102)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999999876
No 407
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=22.53 E-value=89 Score=27.65 Aligned_cols=58 Identities=16% Similarity=0.228 Sum_probs=35.6
Q ss_pred EEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEEEeCCC
Q 012452 375 LVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHS 439 (463)
Q Consensus 375 lV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~f~~g~ 439 (463)
+=.||++.||+|++..=.+.+. +-.+.+..||..+.+.++. +..-...+|++. ..+|.
T Consensus 23 MKLy~~~~SP~~~rVr~~L~e~-----gi~~e~~~v~~~~~~~~~~-~~nP~gkVPvL~-~~dG~ 80 (225)
T 4glt_A 23 MKLLYSNTSPYARKVRVVAAEK-----RIDVDMVLVVLADPECPVA-DHNPLGKIPVLI-LPDGE 80 (225)
T ss_dssp CEEEECSSCHHHHHHHHHHHHH-----TCCCEEEECCTTCSSSCGG-GTCTTCCSCEEE-CTTSC
T ss_pred ceEecCCCCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCCHHHH-HhCCCCCCCEEE-eCCCC
Confidence 3468899999999876555443 3245667777654423444 333356799875 24454
No 408
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}
Probab=22.01 E-value=2.1e+02 Score=24.67 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=35.2
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 433 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~ 433 (463)
.+..||.+.|+.|....-.+++ .+-.+.+..+|.+...+++. +..-...+|++.
T Consensus 10 ~~~Ly~~~~s~~~~~v~~~L~~-----~gi~~e~~~v~~~~~~~~~~-~~~P~g~vP~L~ 63 (213)
T 1yy7_A 10 VMTLFSGPTDIFSHQVRIVLAE-----KGVSVEIEQVEADNLPQDLI-DLNPYRTVPTLV 63 (213)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH-----HTCCEEEEECCTTSCCHHHH-HHCTTCCSSEEE
T ss_pred ceEEEcCCCChhHHHHHHHHHH-----cCCCCeEEeCCcccCcHHHH-HHCCCCCCCEEE
Confidence 4677888999999886654443 33235556666544325665 555667899987
No 409
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=21.97 E-value=34 Score=26.39 Aligned_cols=22 Identities=9% Similarity=0.140 Sum_probs=19.2
Q ss_pred EEEeCccCcHHHHHHHHHhCCC
Q 012452 252 KWNPVANVKGNDIWNFLRTMDV 273 (463)
Q Consensus 252 k~~PI~dWt~~DVw~yi~~~~l 273 (463)
.-.|+..|+.+||-.++...++
T Consensus 13 ~~~~v~~Wt~~dV~~WL~~~gl 34 (91)
T 1v85_A 13 VHKAVDKWTTEEVVLWLEQLGP 34 (91)
T ss_dssp HHSCGGGCCHHHHHHHHHHHCG
T ss_pred CCCCcccCCHHHHHHHHHHcCC
Confidence 3458899999999999999887
No 410
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=21.28 E-value=1.8e+02 Score=25.63 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=36.8
Q ss_pred EEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEE
Q 012452 374 WLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTIL 433 (463)
Q Consensus 374 vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~ 433 (463)
.+..|+.++|+.|....=.+++. +-.+.+..||......++. +..-...+|++.
T Consensus 23 ~~~Ly~~~~sp~~~~v~~~L~~~-----gi~ye~~~v~~~~~~~~~~-~~~P~g~vP~L~ 76 (241)
T 3vln_A 23 SIRIYSMRFSPFAERTRLVLKAK-----GIRHEVININLKNKPEWFF-KKNPFGLVPVLE 76 (241)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHH-----TCCEEEEEBCTTSCCTTHH-HHCTTCCSCEEE
T ss_pred eEEEEcCCCCcHHHHHHHHHHHc-----CCCCeEEecCcccCCHHHH-HhCCCCCCCEEE
Confidence 46778899999999876665543 3245666677655423455 556677899986
No 411
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.86 E-value=39 Score=26.75 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=19.7
Q ss_pred EEeCccCcHHHHHHHHHhCCCC
Q 012452 253 WNPVANVKGNDIWNFLRTMDVP 274 (463)
Q Consensus 253 ~~PI~dWt~~DVw~yi~~~~lp 274 (463)
-.++..|+.+||-.||...|+.
T Consensus 24 ~~~v~~Ws~~~V~~WL~~lgl~ 45 (103)
T 2e8o_A 24 HPDYKTWGPEQVCSFLRRGGFE 45 (103)
T ss_dssp CSCGGGCHHHHHHHHHHHHTCC
T ss_pred ccChhhCCHHHHHHHHHHcCCC
Confidence 4588999999999999999875
No 412
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=20.83 E-value=47 Score=24.67 Aligned_cols=19 Identities=16% Similarity=0.522 Sum_probs=16.6
Q ss_pred EeCccCcHHHHHHHHHhCC
Q 012452 254 NPVANVKGNDIWNFLRTMD 272 (463)
Q Consensus 254 ~PI~dWt~~DVw~yi~~~~ 272 (463)
.|+..|+.+||-.|+...+
T Consensus 2 ~~v~~Ws~~~V~~WL~~l~ 20 (80)
T 3bs5_B 2 EPVSKWSPSQVVDWMKGLD 20 (80)
T ss_dssp CCGGGCCHHHHHHHHHTSC
T ss_pred CccccCCHHHHHHHHHHHh
Confidence 4899999999999999663
No 413
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.58 E-value=2.3e+02 Score=26.22 Aligned_cols=68 Identities=15% Similarity=0.262 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHc-CCcEEEEechhHHH--HHHHHHHHcCCCeEEEEEeC-CC--CcHHHHHHHHHH---HHHhCCc
Q 012452 98 SPLEIMDRALEKF-GNDIAIAFSGAEDV--ALIEYAHLTGRPFRVFSLDT-GR--LNPETYRFFDEV---EKHFGIR 165 (463)
Q Consensus 98 ~a~eil~~~~~~~-~~~i~vafSGGKDS--~vl~L~~~~~~~i~vi~~DT-g~--~fpeT~~~~~~~---~~~~gl~ 165 (463)
+--+.++.+++.+ |..++-+.||+.|. .++.++.+.+.++-+++.|. |. ...+..+++++. +.+.|++
T Consensus 77 ~~~~v~~aAl~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 77 TNIKAIEAGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp SCHHHHHHHHHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHhhCCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 3457788888886 55577788998886 68889999988887777752 32 233444444443 3456875
No 414
>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*
Probab=20.32 E-value=1.4e+02 Score=27.47 Aligned_cols=55 Identities=13% Similarity=0.074 Sum_probs=31.6
Q ss_pred CcEEEEEecCCChhHHHhHHHHHHHHHHhcCCCeEEEEEEcCCCcHHHHHHcCCCCCCCEEEE
Q 012452 372 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILF 434 (463)
Q Consensus 372 k~vlV~FyA~wC~~C~~~~p~l~~la~~~~~~~v~f~~VD~d~~~~~l~~~~~~I~~~PTi~~ 434 (463)
...+..|+.++|+.|+...-.+++. +-.+....||.... .++ +......+|++..
T Consensus 12 ~~~~~Ly~~~~sp~~~~v~~~L~~~-----gi~~~~~~v~~~~~-~~~--~~~p~~~vP~l~~ 66 (290)
T 1z9h_A 12 RLQLTLYQYKTCPFCSKVRAFLDFH-----ALPYQVVEVNPVLR-AEI--KFSSYRKVPILVA 66 (290)
T ss_dssp -CEEEEEECTTCHHHHHHHHHHHHT-----TCCEEEEECCTTTC-GGG--TTCSCCSSCEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHc-----CCCeEEEECChhhH-HHH--HHcCCCCCCEEEE
Confidence 3456778889999998876555542 31234444442222 232 2345578998864
Done!