Query 012453
Match_columns 463
No_of_seqs 329 out of 2165
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 02:48:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012453.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012453hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd08985 GH43_6 Glycosyl hydrol 100.0 7.1E-57 1.5E-61 445.2 31.9 264 145-427 1-265 (265)
2 cd09003 GH43_AXH_1 Glycosyl hy 100.0 1.8E-42 4E-47 349.9 28.7 263 148-429 10-304 (311)
3 cd08988 GH43_ABN Glycosyl hydr 100.0 1.4E-41 3.1E-46 338.2 29.7 252 148-427 1-279 (279)
4 cd09004 GH43_bXyl Glycosyl hyd 100.0 2.2E-41 4.8E-46 335.2 29.1 254 147-433 8-270 (275)
5 cd08981 GH43_2 Glycosyl hydrol 100.0 4E-41 8.8E-46 337.1 29.9 254 145-429 4-285 (291)
6 cd08990 GH43_AXH_like Glycosyl 100.0 2.8E-40 6.1E-45 327.3 29.0 254 149-433 2-270 (274)
7 cd08989 GH43_XYL Glycosyl hydr 100.0 6.6E-40 1.4E-44 324.7 29.1 254 147-428 8-269 (269)
8 cd09002 GH43_XYL_3 Glycosyl hy 100.0 3.8E-39 8.2E-44 321.1 29.1 248 142-429 7-274 (280)
9 PF04616 Glyco_hydro_43: Glyco 100.0 3.3E-39 7.2E-44 319.3 28.3 256 147-429 10-282 (286)
10 cd09000 GH43_XYL_1 Glycosyl hy 100.0 6.8E-39 1.5E-43 319.8 29.4 258 147-429 8-282 (288)
11 cd09001 GH43_XYL_2 Glycosyl hy 100.0 5.3E-39 1.1E-43 318.2 27.6 245 143-429 4-263 (269)
12 cd08999 GH43_ABN_2 Glycosyl hy 100.0 2.8E-38 6E-43 313.7 31.3 254 147-428 8-282 (287)
13 cd08991 GH43_bXyl_2 Glycosyl h 100.0 3.8E-38 8.3E-43 314.5 31.6 255 149-429 2-285 (294)
14 cd08998 GH43_ABN_1 Glycosyl hy 100.0 2E-37 4.3E-42 309.1 31.1 256 147-429 1-282 (288)
15 cd08986 GH43_7 Glycosyl hydrol 100.0 5E-37 1.1E-41 304.2 25.3 233 148-407 3-254 (269)
16 cd08982 GH43_3 Glycosyl hydrol 100.0 2.9E-36 6.4E-41 302.6 29.1 233 147-429 3-260 (295)
17 cd08978 GH_F Glycosyl hydrolas 100.0 6.7E-36 1.4E-40 292.2 29.3 255 148-427 1-271 (271)
18 cd08980 GH43_1 Glycosyl hydrol 100.0 5.7E-34 1.2E-38 284.2 29.3 253 149-429 2-281 (288)
19 cd08984 GH43_5 Glycosyl hydrol 100.0 1.5E-29 3.2E-34 253.6 26.8 260 147-433 11-288 (294)
20 cd08772 GH43_62_32_68 Glycosyl 100.0 3.5E-29 7.5E-34 245.7 28.3 237 148-409 1-263 (286)
21 COG3507 XynB Beta-xylosidase [ 100.0 2.5E-27 5.4E-32 247.9 24.2 214 143-376 23-256 (549)
22 cd08983 GH43_4 Glycosyl hydrol 99.9 9.5E-26 2.1E-30 224.5 24.6 218 147-398 18-247 (276)
23 cd08987 GH62 Glycosyl hydrolas 99.9 2.5E-24 5.5E-29 211.5 23.1 199 148-378 25-242 (303)
24 cd08992 GH43_like_1 Glycosyl h 99.9 2E-20 4.4E-25 190.6 25.8 201 144-378 34-250 (349)
25 cd08995 GH32_Aec43_like Glycos 99.9 5.5E-20 1.2E-24 182.6 24.8 202 149-371 2-222 (280)
26 cd08997 GH68 Glycosyl hydrolas 99.9 1.6E-19 3.5E-24 184.2 25.7 215 184-412 39-322 (349)
27 COG3940 Predicted beta-xylosid 99.8 1.2E-18 2.5E-23 163.1 24.2 271 147-450 13-321 (324)
28 cd08994 GH43_like_2 Glycosyl h 99.8 1.1E-18 2.4E-23 174.2 25.6 213 147-373 13-253 (291)
29 cd08979 GH_J Glycosyl hydrolas 99.7 6.9E-16 1.5E-20 151.4 21.5 193 159-369 14-229 (276)
30 cd08996 GH32_B_Fructosidase Gl 99.7 5.7E-15 1.2E-19 147.8 22.4 177 150-347 7-201 (298)
31 cd08990 GH43_AXH_like Glycosyl 99.6 8.2E-15 1.8E-19 145.3 18.3 206 54-299 32-248 (274)
32 cd08999 GH43_ABN_2 Glycosyl hy 99.6 1.7E-14 3.6E-19 143.3 19.8 215 55-299 32-263 (287)
33 cd08994 GH43_like_2 Glycosyl h 99.6 2.8E-14 6.2E-19 142.4 20.2 182 220-409 10-225 (291)
34 cd08993 GH43_DUF377 Glycosyl h 99.6 1.6E-13 3.4E-18 135.8 22.2 216 149-389 2-236 (268)
35 cd08986 GH43_7 Glycosyl hydrol 99.6 5.1E-14 1.1E-18 139.7 16.0 208 55-299 38-257 (269)
36 cd09004 GH43_bXyl Glycosyl hyd 99.6 1.3E-13 2.9E-18 136.6 18.7 198 55-298 36-247 (275)
37 cd08772 GH43_62_32_68 Glycosyl 99.5 1.1E-12 2.4E-17 128.7 17.9 215 55-298 27-263 (286)
38 cd08991 GH43_bXyl_2 Glycosyl h 99.5 2.6E-12 5.7E-17 128.4 19.9 216 55-298 25-265 (294)
39 cd08988 GH43_ABN Glycosyl hydr 99.5 3.3E-12 7.1E-17 127.4 19.5 204 55-298 21-262 (279)
40 cd09003 GH43_AXH_1 Glycosyl hy 99.5 2.5E-12 5.3E-17 130.4 18.4 208 54-298 47-279 (311)
41 cd08995 GH32_Aec43_like Glycos 99.5 4.2E-12 9.2E-17 126.1 19.4 204 55-293 32-245 (280)
42 cd08981 GH43_2 Glycosyl hydrol 99.5 6.5E-12 1.4E-16 126.2 20.3 227 55-311 38-284 (291)
43 TIGR01322 scrB_fam sucrose-6-p 99.4 5.6E-12 1.2E-16 133.8 20.5 169 158-346 36-224 (445)
44 cd09000 GH43_XYL_1 Glycosyl hy 99.4 6.5E-12 1.4E-16 125.5 17.8 211 55-298 33-258 (288)
45 smart00640 Glyco_32 Glycosyl h 99.4 1E-11 2.2E-16 131.6 20.2 177 151-347 14-215 (437)
46 PF04616 Glyco_hydro_43: Glyco 99.4 1.5E-12 3.2E-17 128.9 12.7 213 55-298 35-260 (286)
47 PF02435 Glyco_hydro_68: Levan 99.4 1.1E-11 2.3E-16 128.6 19.0 236 184-429 94-411 (428)
48 cd08989 GH43_XYL Glycosyl hydr 99.4 1.2E-11 2.6E-16 122.7 18.7 201 55-298 33-250 (269)
49 cd08998 GH43_ABN_1 Glycosyl hy 99.4 3.1E-11 6.7E-16 120.6 20.4 209 55-298 22-263 (288)
50 cd08978 GH_F Glycosyl hydrolas 99.4 3E-11 6.4E-16 118.1 19.7 212 55-299 26-254 (271)
51 cd09002 GH43_XYL_3 Glycosyl hy 99.4 9.4E-12 2E-16 124.3 16.3 200 55-298 40-254 (280)
52 cd09001 GH43_XYL_2 Glycosyl hy 99.3 2.2E-11 4.7E-16 120.9 16.0 200 55-296 36-244 (269)
53 cd08982 GH43_3 Glycosyl hydrol 99.3 8E-11 1.7E-15 118.6 17.9 198 57-298 25-240 (295)
54 PF00251 Glyco_hydro_32N: Glyc 99.3 3.9E-10 8.4E-15 114.2 21.9 201 149-370 12-237 (308)
55 cd08985 GH43_6 Glycosyl hydrol 99.3 2E-10 4.4E-15 113.8 17.5 208 53-299 30-248 (265)
56 cd08992 GH43_like_1 Glycosyl h 99.2 5.7E-10 1.2E-14 114.4 16.8 179 52-297 78-269 (349)
57 cd08980 GH43_1 Glycosyl hydrol 99.2 2E-09 4.4E-14 107.5 18.7 213 55-298 23-260 (288)
58 cd08984 GH43_5 Glycosyl hydrol 99.1 2.7E-09 6E-14 107.1 17.5 192 54-298 48-256 (294)
59 cd08996 GH32_B_Fructosidase Gl 99.1 4.2E-09 9E-14 105.5 16.8 205 55-294 34-256 (298)
60 cd08979 GH_J Glycosyl hydrolas 99.0 1.3E-08 2.8E-13 99.8 17.3 159 54-245 34-210 (276)
61 cd08983 GH43_4 Glycosyl hydrol 99.0 6.5E-08 1.4E-12 96.6 20.4 176 222-411 17-208 (276)
62 cd08997 GH68 Glycosyl hydrolas 98.9 3.6E-08 7.8E-13 101.2 16.8 194 55-269 43-286 (349)
63 TIGR01322 scrB_fam sucrose-6-p 98.8 1.6E-07 3.5E-12 99.9 18.6 208 55-294 57-285 (445)
64 PF00251 Glyco_hydro_32N: Glyc 98.8 4.5E-08 9.8E-13 99.1 12.8 223 34-294 22-267 (308)
65 PF03664 Glyco_hydro_62: Glyco 98.8 6.7E-07 1.5E-11 86.1 19.4 195 148-376 26-239 (271)
66 smart00640 Glyco_32 Glycosyl h 98.8 1.4E-07 3.1E-12 100.0 16.6 203 55-294 40-270 (437)
67 COG3507 XynB Beta-xylosidase [ 98.7 6.2E-07 1.3E-11 95.4 16.3 209 55-296 55-286 (549)
68 COG1621 SacC Beta-fructosidase 98.6 2E-06 4.2E-11 91.7 18.4 175 150-345 45-235 (486)
69 cd08993 GH43_DUF377 Glycosyl h 98.6 2.6E-06 5.6E-11 84.3 17.2 137 226-371 3-155 (268)
70 PF04041 DUF377: Domain of unk 98.5 1.5E-05 3.2E-10 81.2 21.2 205 187-408 61-291 (312)
71 cd08987 GH62 Glycosyl hydrolas 97.9 0.00053 1.2E-08 68.6 16.9 165 63-268 55-230 (303)
72 COG1621 SacC Beta-fructosidase 97.9 0.00056 1.2E-08 73.3 17.4 205 55-297 72-300 (486)
73 KOG0228 Beta-fructofuranosidas 97.2 0.0041 8.9E-08 66.0 12.8 160 158-335 69-247 (571)
74 PF04041 DUF377: Domain of unk 97.1 0.011 2.3E-07 60.4 14.5 189 220-429 29-241 (312)
75 PF02435 Glyco_hydro_68: Levan 96.8 0.0057 1.2E-07 64.3 9.8 187 62-269 109-350 (428)
76 COG2152 Predicted glycosylase 96.3 0.17 3.6E-06 51.1 15.7 179 186-378 61-259 (314)
77 KOG0228 Beta-fructofuranosidas 96.3 0.025 5.5E-07 60.2 10.4 140 54-234 89-251 (571)
78 PF13088 BNR_2: BNR repeat-lik 95.6 2.6 5.6E-05 41.2 21.0 196 148-370 49-249 (275)
79 COG3940 Predicted beta-xylosid 95.4 0.97 2.1E-05 43.6 15.6 180 88-298 67-278 (324)
80 COG2152 Predicted glycosylase 94.6 5.7 0.00012 40.4 19.4 117 222-344 30-161 (314)
81 PF13088 BNR_2: BNR repeat-lik 94.3 2.6 5.7E-05 41.1 16.6 172 185-369 15-198 (275)
82 PF13810 DUF4185: Domain of un 87.4 37 0.00081 34.8 24.7 168 233-411 103-307 (316)
83 PF03664 Glyco_hydro_62: Glyco 80.7 63 0.0014 32.1 15.7 171 224-414 26-211 (271)
84 PF13810 DUF4185: Domain of un 68.2 7.8 0.00017 39.7 4.9 68 226-299 234-307 (316)
85 KOG3545 Olfactomedin and relat 55.5 1.3E+02 0.0027 29.9 10.4 70 275-349 121-191 (249)
86 smart00284 OLF Olfactomedin-li 54.5 35 0.00076 34.0 6.5 67 275-346 127-194 (255)
87 PF02191 OLF: Olfactomedin-lik 40.8 1.1E+02 0.0023 30.4 7.5 68 276-348 123-191 (250)
88 cd00260 Sialidase Sialidases o 29.5 5.9E+02 0.013 25.5 20.2 170 186-370 46-238 (351)
89 cd00260 Sialidase Sialidases o 24.0 7.4E+02 0.016 24.8 22.9 175 187-371 113-303 (351)
No 1
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=100.00 E-value=7.1e-57 Score=445.18 Aligned_cols=264 Identities=57% Similarity=1.032 Sum_probs=231.6
Q ss_pred EEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeee
Q 012453 145 IQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLE 224 (463)
Q Consensus 145 i~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iW 224 (463)
|++||++|++. +++||||+|++.... ..+.+|+||+|+||+||+.++.||+..+. ....+..+.+|
T Consensus 1 i~ah~~~i~~~--~~~yY~ygs~~~~~~----------~~~~gi~~~sS~DLvnW~~~g~vl~~~~~--~~~~~~~~~~w 66 (265)
T cd08985 1 IQAHGGGILKV--GGTYYWYGENKGGGD----------TAFGGVSCYSSTDLVNWTFEGLALTPEED--SADLGPGRIIE 66 (265)
T ss_pred CccccCceEEE--CCEEEEEEEecCCCC----------cccccEEEEECCCCccceECceecccccc--ccccccCcEEE
Confidence 67999999986 589999999865321 23689999999999999999999987642 11233567899
Q ss_pred eceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEecCCCcEE
Q 012453 225 RPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDNSELH 304 (463)
Q Consensus 225 AP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~n~~i~ 304 (463)
||+|+|++++|+|||||++.+.++...+||||+|++|+|||++.+...+.+..+|||+||+|+||++||+|+++.+..++
T Consensus 67 aP~v~y~~~~g~Y~m~~~~~~~~~~~~~igvA~Sd~p~Gpf~~~~~~~~~~~~~~Dp~vf~DdDG~~Yl~~~~~~~~~i~ 146 (265)
T cd08985 67 RPKVIYNAKTGKYVMWMHIDSSDYSDARVGVATSDTPTGPYTYLGSFRPLGYQSRDFGLFVDDDGTAYLLYSDRDNSDLY 146 (265)
T ss_pred CCeEEEeCCCCEEEEEEEeCCCCCcceeEEEEEeCCCCCCCEECCccCCCCCCccCCceEEcCCCCEEEEEecCCCCceE
Confidence 99999998999999999998655667899999999999999998766667788999999999999999999987677899
Q ss_pred EEEcCCCCCCccccEEEeecCceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEEEeCCCCCCceeCCCccccCCccccee
Q 012453 305 IGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSGCTGWAPNEALVHAAESIMGPWEDMGNPCIGGNKVFRLT 384 (463)
Q Consensus 305 ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~~g~Pv~~~~~~~~~~ 384 (463)
++||++|++++.++...+..+..+|||+|||++|+|||+||++++|.++...+++|++|+|||+..+++..++ .+
T Consensus 147 i~~L~~d~~~~~~~~~~~~~~~~~EaP~i~K~~g~YYL~~S~~t~~~~~~~~y~~s~s~~GP~~~~~~~~~~~-----~~ 221 (265)
T cd08985 147 IYRLTDDYLSVTGEVTTVFVGAGREAPAIFKRNGKYYLLTSGLTGWNPNDARYATATSILGPWTDLGNPGPGG-----ST 221 (265)
T ss_pred EEEeCCCcccccceEEEccCCCccccceEEEECCEEEEEEccCCCccCCceEEEEecCCCCCccccCcCCCCC-----Cc
Confidence 9999999999999887777778999999999999999999999899888777789999999999999885443 58
Q ss_pred ccCCCceEEEcccC-CcccEEEEEeEeCCCCCCCCeeEEEEEEE
Q 012453 385 TFFAQSTYVIPLAG-LPGLYIFMADRWNPADLRESRYIWLPLIV 427 (463)
Q Consensus 385 t~~sq~~~V~~~~G-~~~~yi~~~d~w~~~~~~~~R~v~lPi~~ 427 (463)
||.+|+++|++++| ++++||||||||++.++.++|||||||+|
T Consensus 222 t~~sq~~~v~~~~g~~~~~~~~~~drw~~~~~~~s~yvwlp~~~ 265 (265)
T cd08985 222 TYGSQTTFVLPVPGSKQTTYIYMGDRWNPSDLGDSRYVWLPLTF 265 (265)
T ss_pred EECCCcceEEEeCCCCCCEEEEEEcccCCCCCCCCEEEEEEeeC
Confidence 99999999999998 45799999999999999999999999985
No 2
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=100.00 E-value=1.8e-42 Score=349.92 Aligned_cols=263 Identities=20% Similarity=0.226 Sum_probs=190.9
Q ss_pred eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceeccc-CCcccccccCCCCeeeec
Q 012453 148 HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAA-EETNETHDLYKLNVLERP 226 (463)
Q Consensus 148 hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~-~~~~~~~~~~~~~~iWAP 226 (463)
+||.|++. +|+||+|+|......-....++.....+++|.||+|+||+||+.++.||+. ....| ...+|||
T Consensus 10 aDP~~~~~--~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w------~~~~WAP 81 (311)
T cd09003 10 ADPTAVVY--NGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKW------AGNSWAP 81 (311)
T ss_pred CCCCeEEE--CCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCc------ccccCCC
Confidence 57888875 589999999753110000001122345789999999999999999999973 22233 2368999
Q ss_pred eEEEEccC----CEEEEEEEEeCCCCCcceEEEEEeCCCCCCceec-cc-cC----C---CCCCccCceEEEcCCCcEEE
Q 012453 227 KVIYNDRT----GKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYL-YS-KR----P---HGFDSRDMTIFKDDDGVAYL 293 (463)
Q Consensus 227 ~vi~n~~~----GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~-~~-~~----p---~g~~siDp~vF~DdDG~~YL 293 (463)
+|++ ++ |+|||||++. ..+|+||+|++|+|||++. +. .. + ....+|||++|+|+||+.||
T Consensus 82 ~v~~--~~~~~~gkyylyy~~~-----~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~~Yl 154 (311)
T cd09003 82 SIAV--KKINGKGKFYLYFANG-----GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQGYL 154 (311)
T ss_pred ceEE--eccCCCCEEEEEEecC-----CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCCEEE
Confidence 9998 55 9999999863 3579999999999999985 22 11 1 12347999999999999999
Q ss_pred EEEecCC-------CcEEEEEcCCCCCCccccEEEeecCceeeeeEEEEECCEEEEEEeCCC-----CCCCCcEEEE-Ee
Q 012453 294 VYSSEDN-------SELHIGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSGCT-----GWAPNEALVH-AA 360 (463)
Q Consensus 294 ~yg~~~n-------~~i~ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vfK~~G~YYL~yS~~t-----g~~~n~~v~~-~S 360 (463)
+|++... +.++++||++|++++.++...+..+..+|||+|+|++|+|||+||+.. +...+|.+.+ +|
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~g~~~~i~~~~~~Egp~~~K~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s 234 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISVDGSAVTIDAPYFFEASGLHKINGTYYYSYCTNFGGRDPGKPPPGRIAYMTS 234 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceeccCCceEccCCCceEeeeEEEECCEEEEEEeCCCCccCCCCCCceeEEEEEc
Confidence 9986332 479999999999999998877776678999999999999999999642 2355788765 89
Q ss_pred CCCCCCceeCCCccccCCcccceeccCCCceEEEcccCCcccEEEEEeEeCCCC----CCCCeeEE-EEEEEcC
Q 012453 361 ESIMGPWEDMGNPCIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPAD----LRESRYIW-LPLIVRG 429 (463)
Q Consensus 361 ~s~~GPw~~~g~Pv~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~----~~~~R~v~-lPi~~~~ 429 (463)
++|+|||++.+. ++...... ....+.+|++|++.+| +||++||.+-.+.. ....|+++ .||.|++
T Consensus 235 ~~~~GP~~~~g~-il~~~~~~-~~~~g~gH~s~~~~~g--~~y~vyH~~~~~~~~~~~~~~~R~~~i~~~~~~~ 304 (311)
T cd09003 235 KNPMGPFTYKGI-ILKNPGAF-FGNGGNNHHSIFEFKG--KWYIAYHARTLAKALGGATAGYRSPHIDELTYNE 304 (311)
T ss_pred CCCCCCcccCCE-eccCCccc-cCCccCCCccEEEeCC--eEEEEEeCCcCCccccCCCCceEEEEEEEEEECC
Confidence 999999998764 33321100 1123445556777666 89999986544321 24468765 6899986
No 3
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=100.00 E-value=1.4e-41 Score=338.18 Aligned_cols=252 Identities=19% Similarity=0.243 Sum_probs=187.8
Q ss_pred eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCccccc--ccCCCCeeee
Q 012453 148 HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETH--DLYKLNVLER 225 (463)
Q Consensus 148 hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~--~~~~~~~iWA 225 (463)
|||+|++. +++||+|+|+ .++.|++|+||+||+.++.+|+..+ .|.. .....+.+||
T Consensus 1 ~DP~vi~~--~~~YY~~~T~------------------~g~~v~~S~DL~~W~~~g~~~~~~~-~~~~~~~~~~~~~~WA 59 (279)
T cd08988 1 HDPVIIKE--GDTWYVFGTG------------------PGITILSSKDLVNWTYSGSAFATEP-TWKKRVPPSFDGHLWA 59 (279)
T ss_pred CCCEEEEE--CCEEEEEEec------------------CCEEEEECCCcCCccccCccccCCC-ccccccCCCCCCCEec
Confidence 68999987 4799999984 2589999999999999999987543 2321 1123467999
Q ss_pred ceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceecc----cc-----CCCCCCccCceEEEcCCCcEEEEEE
Q 012453 226 PKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLY----SK-----RPHGFDSRDMTIFKDDDGVAYLVYS 296 (463)
Q Consensus 226 P~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~----~~-----~p~g~~siDp~vF~DdDG~~YL~yg 296 (463)
|+|++ .+|+|||||++...+....+||||+|++|+|||++.+ .. .+.+...|||++|+|+||+.||+|+
T Consensus 60 P~v~~--~~G~yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~~~~~~iDp~~f~DdDG~~Yl~~g 137 (279)
T cd08988 60 PDIYQ--HNGKFYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDASDNYNAIDPAIIFDQHGQPWLSFG 137 (279)
T ss_pred ceEEE--ECCEEEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccccCceEecCCCCCCCccCCceEEcCCCCEEEEec
Confidence 99998 6899999999875544567999999999999998754 11 1224568999999999999999999
Q ss_pred ecCCCcEEEEEcCCCCCCc--cccEEEeecC----ceeeeeEEEEECCEEEEEEeCCC---CCCCCcEEEE-EeCCCCCC
Q 012453 297 SEDNSELHIGPLTSDYLDV--SNVVRRILVG----QHREAPALFKHLGTYYMVTSGCT---GWAPNEALVH-AAESIMGP 366 (463)
Q Consensus 297 ~~~n~~i~ia~Ls~D~~~~--~g~~~~i~~~----~~~EgP~vfK~~G~YYL~yS~~t---g~~~n~~v~~-~S~s~~GP 366 (463)
++. +.|.++||++|++++ .++...+..+ ..+|||+|+|+||+||||+|.+. +...+|.+.+ +|++|+||
T Consensus 138 ~~~-~gi~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~g~YYl~~S~g~~~~~~~~~y~v~~arS~~~~GP 216 (279)
T cd08988 138 SFW-GGIKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRGDYYYLFVSFGLCCRGGDSTYKIAVGRSKNITGP 216 (279)
T ss_pred ccC-CCEEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcCCeEEEEEEcCcccCCCCCCeEEEEEEeCCCCCC
Confidence 753 479999999999886 3555555432 57999999999999999999632 3456677764 89999999
Q ss_pred ceeC-CCccccCCcc--c--ceeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCeeEE-EEEEE
Q 012453 367 WEDM-GNPCIGGNKV--F--RLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESRYIW-LPLIV 427 (463)
Q Consensus 367 w~~~-g~Pv~~~~~~--~--~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R~v~-lPi~~ 427 (463)
|+.. ++|++..... + ...-.+.+|++|+..+| ++||+||..-.. ....|.++ .||.|
T Consensus 217 y~~~~~~p~~~~~~~~~~~~~~~~~g~GH~~v~~~~g--~~~~~yH~~~~~--~~~~r~~~i~~l~~ 279 (279)
T cd08988 217 YLDKTGRSMLQGGGTILDKGNDRWVGPGHNSAYTDDG--KDYLVLHAYDAA--DNGEPKLKILPLHW 279 (279)
T ss_pred CCCCCCCCcccCCceEEEcCCCcEEcCCCCEEEeCCC--CEEEEEEEeeCC--CCCCcEEEEEeccC
Confidence 9996 7888753210 0 01223445667777665 688888764432 45667765 46654
No 4
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=100.00 E-value=2.2e-41 Score=335.16 Aligned_cols=254 Identities=26% Similarity=0.347 Sum_probs=198.9
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeec
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP 226 (463)
.+||.|++. +|+||+|+|..... ..+.++.+++|+||++|+.++.+|+..+..| ..+.+|||
T Consensus 8 ~~DP~i~~~--~g~yY~~~t~~~~~-----------~~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~-----~~~~~wAP 69 (275)
T cd09004 8 YADPEIRIF--GGTYYIYPTSDGAG-----------GEQTPFDVFSSKDLVNWTKEGIILDMADVSW-----ANRAAWAP 69 (275)
T ss_pred CCCCCeEEE--CCEEEEEEeccCCC-----------CCeeEEEEEECCCCCCceECcccccccCCcc-----cCCCcCCC
Confidence 368999986 48999999864210 0135799999999999999999987643333 35679999
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCcee-ccccC----CCCCCccCceEEEcCCCcEEEEEEecCCC
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDY-LYSKR----PHGFDSRDMTIFKDDDGVAYLVYSSEDNS 301 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~-~~~~~----p~g~~siDp~vF~DdDG~~YL~yg~~~n~ 301 (463)
+|++ .+|+|||||++. .+|+||+|++|+|||++ .+... ..+...|||+||+|+||+.||+|+++ +
T Consensus 70 ~v~~--~~g~yy~yys~~------~~i~va~s~~p~gp~~~~~~~p~~~~~~~~~~~iDp~vf~d~dG~~yl~~~~~--~ 139 (275)
T cd09004 70 SVIE--RNGKYYFYFSAN------GGIGVAVADSPLGPFKDALGKPLIDKFTFGAQPIDPDVFIDDDGQAYLYWGGW--G 139 (275)
T ss_pred eEEE--ECCEEEEEEEcC------CcEEEEEeCCCCCCCCCCCCCccccCCcCCCCccCCCeEECCCCCEEEEEcCc--C
Confidence 9998 679999999974 57999999999999998 33211 12567999999999999999999864 4
Q ss_pred cEEEEEcCCCCCCccccEEEe--ecCceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEE-EeCCCCCCceeCCCccccCC
Q 012453 302 ELHIGPLTSDYLDVSNVVRRI--LVGQHREAPALFKHLGTYYMVTSGCTGWAPNEALVH-AAESIMGPWEDMGNPCIGGN 378 (463)
Q Consensus 302 ~i~ia~Ls~D~~~~~g~~~~i--~~~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~-~S~s~~GPw~~~g~Pv~~~~ 378 (463)
.+.+++|++|+++++++...+ .....+|||+|+|++|+|||+||.+....++|.+.+ +|++|+|||++.+++++...
T Consensus 140 ~~~i~~l~~d~~~~~~~~~~~~~~~~~~~EgP~i~k~~G~yyl~ys~~~~~~~~Y~~~ya~s~~~~GP~~~~~~~~~~~~ 219 (275)
T cd09004 140 HCNVAKLNEDMISFDGERDGSEITPKNYFEGPFMFKRNGIYYLMWSEGGWTDPDYHVAYAMADSPLGPFERPGNIILQQD 219 (275)
T ss_pred CEEEEEECCCcccccCcceeeeccCCCceecceEEEECCEEEEEEECCCCCCCCceEEEEEcCCCCCCcccCCcEeeeCC
Confidence 688999999999988876553 335689999999999999999997654556788775 79999999999876665432
Q ss_pred cccceeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCeeEE-EEEEEcCCCCC
Q 012453 379 KVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESRYIW-LPLIVRGPADR 433 (463)
Q Consensus 379 ~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R~v~-lPi~~~~~~~~ 433 (463)
. ...++.+|++|++.++..+||++||.+..+......|.++ .||.|++ |+
T Consensus 220 ~---~~~~g~gH~~~~~~~~~~~~~~~yh~~~~~~~~~~~R~~~i~~~~~~~--dG 270 (275)
T cd09004 220 P---GIATGPGHHSVVNVPGTDEWYIVYHRRPLPETDGNHRQTCIDRMEFNE--DG 270 (275)
T ss_pred C---CCcccCCCCEEEEeCCCCeEEEEEeCCCCCCCCCceeeEEEEEEEECC--CC
Confidence 1 3456677778887764347999999877654566788866 5999987 55
No 5
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=100.00 E-value=4e-41 Score=337.15 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=195.3
Q ss_pred EEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeee
Q 012453 145 IQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLE 224 (463)
Q Consensus 145 i~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iW 224 (463)
++.|||.|++++.+|+||+|+|..... + ....+++.||+|+||+||+.++.+++..+..| ....+|
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~-----~----~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~-----~~~~~W 69 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNI-----W----GGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFW-----ADDNFW 69 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccc-----c----ccCCCcEEEEECCChhcccccceeeccCCCcC-----cccccc
Confidence 457999999987789999999975311 0 02346899999999999999999997654333 345799
Q ss_pred eceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccc--cCCCCCCccCceEEEcCCCcEEEEEEec----
Q 012453 225 RPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYS--KRPHGFDSRDMTIFKDDDGVAYLVYSSE---- 298 (463)
Q Consensus 225 AP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~--~~p~g~~siDp~vF~DdDG~~YL~yg~~---- 298 (463)
||+|++ .+|+|||||++...+....+|+||+|++|+|||++.+. ..+.+...|||++|+|+||+.||+|+..
T Consensus 70 AP~v~~--~~G~yyly~s~~~~~~~~~~~~va~s~~p~GP~~~~~~~~~~~~~~~~iDp~~f~DdDG~~Yl~~~~~~~~~ 147 (291)
T cd08981 70 APEVHE--YKGRYYMFATFHNPGGERRGTAILVSDSPEGPFVPHSDGPVTPEDWMCLDGTLYVDEDGKPWMVFCHEWVQV 147 (291)
T ss_pred CCeeee--eCCEEEEEEEeccCCCceeeEEEEECCCCCCCCEeCCCCccCCCCCceEcCceEEcCCCCEEEEEEeccccc
Confidence 999997 89999999998754333467999999999999998652 2234467899999999999999999752
Q ss_pred CCCcEEEEEcCCCCCCccccEEEeec------------------CceeeeeEEEEE-CCEEEEEEeCCCCCCCCcEEEE-
Q 012453 299 DNSELHIGPLTSDYLDVSNVVRRILV------------------GQHREAPALFKH-LGTYYMVTSGCTGWAPNEALVH- 358 (463)
Q Consensus 299 ~n~~i~ia~Ls~D~~~~~g~~~~i~~------------------~~~~EgP~vfK~-~G~YYL~yS~~tg~~~n~~v~~- 358 (463)
.++.|+++||++|++++.|+++.++. ...+|||+|+|+ +|+|||+||.++ .++|.+.+
T Consensus 148 ~~~~i~~~eL~~d~~~~~ge~~~i~~~~~~~w~~~~~~~~~~~~~~~~EgP~i~k~~~G~YYl~yS~~~--~~~Y~~~~~ 225 (291)
T cd08981 148 YDGTIEAVRLSPDLSRAIGEPVLLFRASEAPWVREFGLIGRGSGGYVTDGPFLYRTKSGRLLMLWSSFS--DGGYAQGVA 225 (291)
T ss_pred CCCCEEEEEeCCCccccCCceEEEecCCcCCcccccccccccCCCeEeeCCEEEEeCCCcEEEEEEecC--CCCEEEEEE
Confidence 24679999999999998888876542 126799999995 899999999643 55677765
Q ss_pred EeCC--CCCCceeCCCccccCCcccceeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCeeEEEEEEEcC
Q 012453 359 AAES--IMGPWEDMGNPCIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESRYIWLPLIVRG 429 (463)
Q Consensus 359 ~S~s--~~GPw~~~g~Pv~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R~v~lPi~~~~ 429 (463)
+|++ |+|||++.++|++.. ..+|+ ++|...+| +||++||.. . ....+|.+++||.+++
T Consensus 226 rs~s~~~~GPy~~~~~pi~~~-------~~GH~-s~v~~~~G--~~~~vyH~~-~--~~~~~~~~~~~~~~~~ 285 (291)
T cd08981 226 RSESGTLLGPWVQEPEPLISD-------DGGHG-MLFRTFDG--RLMLSLHTP-N--KHPDERPIFIEVDEDG 285 (291)
T ss_pred EcCCCCccCCcEECCCcccCC-------CCCCC-eeEEcCCC--CEEEEEECC-C--CCCCeeeEEEEEeecC
Confidence 6776 999999998887643 12332 34546666 588888755 3 3456778999999986
No 6
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=100.00 E-value=2.8e-40 Score=327.31 Aligned_cols=254 Identities=23% Similarity=0.317 Sum_probs=192.8
Q ss_pred CCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceE
Q 012453 149 GGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKV 228 (463)
Q Consensus 149 d~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~v 228 (463)
||.|++. +|+||+|+|+..... .+ ..+.+.++.|++|+||+||+.++.+|+..+.+ .+..+.+|||+|
T Consensus 2 DP~~~~~--~~~yy~~~t~~~~~~-----~~-~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~----~~~~~~~wAP~i 69 (274)
T cd08990 2 DPAAHVF--NGRVYIYTSHDEAGG-----GG-DDFCMNDYHVFSSPDLVNWTDHGVILSVTDFP----AWAKGQAWAPDV 69 (274)
T ss_pred CCCcEEE--CCEEEEEeCCCCCCC-----CC-CccccceEEEEECCCCCCcEECcccccCCCCC----ccccCCcCcCeE
Confidence 5777875 599999999764211 00 01346789999999999999999999865433 123567999999
Q ss_pred EEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccC-----CCCCCccCceEEEcCCCcEEEEEEecCCCcE
Q 012453 229 IYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKR-----PHGFDSRDMTIFKDDDGVAYLVYSSEDNSEL 303 (463)
Q Consensus 229 i~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~-----p~g~~siDp~vF~DdDG~~YL~yg~~~n~~i 303 (463)
++ .+|+|||||++... ....+|+||+|++|+|||++.+... +.+...|||++|+|+||+.||+|++. ..+
T Consensus 70 ~~--~~g~yy~yy~~~~~-~~~~~igva~s~~p~Gpw~~~~~~~~~~~~~~~~~~iDp~vf~d~dG~~yl~~~~~--~~~ 144 (274)
T cd08990 70 VE--KNGKYYLYFPARDK-DGGFAIGVAVSDSPAGPFKDAGGPILITTPSGGWYSIDPAVFIDDDGQAYLYWGGG--LGL 144 (274)
T ss_pred EE--ECCEEEEEEEeecC-CCceEEEEEEeCCCCCCCCCCCCccccccCCCCCCccCCcEEECCCCCEEEEECCc--CCE
Confidence 98 79999999998754 2457899999999999999876432 13567899999999999999999864 479
Q ss_pred EEEEcCCCCCCccccEEEee--------cCceeeeeEEEEECCEEEEEEeCCCCCCCCcEEE-EEeCCCCCCceeCCCcc
Q 012453 304 HIGPLTSDYLDVSNVVRRIL--------VGQHREAPALFKHLGTYYMVTSGCTGWAPNEALV-HAAESIMGPWEDMGNPC 374 (463)
Q Consensus 304 ~ia~Ls~D~~~~~g~~~~i~--------~~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~-~~S~s~~GPw~~~g~Pv 374 (463)
.+++|++|+++++++.+.+. ....+|||.|+|++|+|||+||.+. .+.+. ++|++|+|||+..+.++
T Consensus 145 ~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~G~YYl~yS~~~----~~~~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 145 RVAKLKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRNGTYYLSYSTGD----PEEIAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred EEEEeCccccccCCCcEEEEeccccCCCCCCcccceeEEEECCEEEEEEECCC----CcEEEEEEcCCCCCCcccCcEEe
Confidence 99999999999988876664 2357999999999999999999753 34555 48999999999887655
Q ss_pred ccCCcccceeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCee-EEEEEEEcCCCCC
Q 012453 375 IGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESRY-IWLPLIVRGPADR 433 (463)
Q Consensus 375 ~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R~-v~lPi~~~~~~~~ 433 (463)
... ...+..|+++++.+| +|||+||..-...+....|. ...||.|++ |+
T Consensus 221 ~~~------~~~g~gh~~~~~~~g--~~y~~yh~~~~~~~~~~~R~~~~~~~~w~~--dG 270 (274)
T cd08990 221 DPP------VNGGTNHGSIVEFKG--QWYLFYHRATLSGGGDFRRSVCIDELEYNA--DG 270 (274)
T ss_pred cCC------CCCCCCCCeEEEECC--eEEEEEECCcCCCCCCcceeEEEEEEEECC--CC
Confidence 421 123344556777666 78998875444433455676 457999975 55
No 7
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=100.00 E-value=6.6e-40 Score=324.69 Aligned_cols=254 Identities=19% Similarity=0.206 Sum_probs=182.4
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeec
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP 226 (463)
.+||.|++. +++||+++|... .++++.|++|+||+||+.++.++...+..+.......+.+|||
T Consensus 8 ~~DP~ii~~--~~~yY~~~t~~~--------------~~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP 71 (269)
T cd08989 8 NPDPSIIRA--GDDYYMASSTFE--------------WFPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAP 71 (269)
T ss_pred CCCCcEEEE--CCeEEEEECccc--------------cCCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcc
Confidence 369999986 589999987522 2467999999999999999998875432111011124569999
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEecCCCcEEEE
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDNSELHIG 306 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~n~~i~ia 306 (463)
+|++ .+|||||||++... ....+|+||+|++|+|||++... .....|||++|+|+||+.||+|+++ +.|+++
T Consensus 72 ~v~~--~~G~yy~yy~~~~~-~~~~~i~va~sd~~~Gpw~~~~~---~~~~~IDp~~f~D~dG~~Yl~~~~~--~~i~l~ 143 (269)
T cd08989 72 CLSY--YDGKFWLIYTAVKV-WKDCHNYLFTAEDITGPWSRPIF---LNYGGFDPSLFHDDDGKKYLINMGW--SGIRLQ 143 (269)
T ss_pred eEEE--ECCEEEEEEecccc-CCCceEEEEEECCCCCCCcCCEE---CCCCcccCceEEcCCCCEEEEecCC--CcEEEE
Confidence 9998 79999999998643 24578999999999999997432 1236899999999999999999865 579999
Q ss_pred EcCCCCCCccccEE--Eeec---CceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEEEeCCCCCCceeC-CCccccCCcc
Q 012453 307 PLTSDYLDVSNVVR--RILV---GQHREAPALFKHLGTYYMVTSGCTGWAPNEALVHAAESIMGPWEDM-GNPCIGGNKV 380 (463)
Q Consensus 307 ~Ls~D~~~~~g~~~--~i~~---~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~~-g~Pv~~~~~~ 380 (463)
||++|...+.++.. .+.. ....|||+|+|++|+||||||.......+...+++|++|+|||+++ +||++.....
T Consensus 144 ~l~~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~G~YYl~~S~~~~~~~~~~~~~rs~~~~GP~~~~~~~pl~~~~~~ 223 (269)
T cd08989 144 EYSPAEKKLIGKPLNKVIIKGTDDGLTEGPHLYKINGKYYLTTAEGGTGYIHEETIARSDKIHGPYEGRPDNPLVLWDTP 223 (269)
T ss_pred EEChhhCCCCCCceeEEEecCCCCCccccceEEEECCEEEEEEeeCCCCCCeeEEEEEECCCCCCCCcCCCCcceeecCC
Confidence 99999887776554 2322 3479999999999999999996433333333445899999999998 5686432110
Q ss_pred cceeccCCCceEEEcc-cCCcccEEEEEeEeCCCCCCCCee-EEEEEEEc
Q 012453 381 FRLTTFFAQSTYVIPL-AGLPGLYIFMADRWNPADLRESRY-IWLPLIVR 428 (463)
Q Consensus 381 ~~~~t~~sq~~~V~~~-~G~~~~yi~~~d~w~~~~~~~~R~-v~lPi~~~ 428 (463)
.....+.+|++|++. +| +||++||. +........|. ...||+|.
T Consensus 224 -~~~~~g~GH~s~v~~~~G--~~~~~~h~-~~~~~~~~gR~~~l~~i~W~ 269 (269)
T cd08989 224 -GNPLQKCGHASLVETPDG--KWYLAHLT-GRPGFCPLGRETALQPIEWE 269 (269)
T ss_pred -CCCcccCCCcCeEECcCC--CEEEEEEe-eCCCCCccCcceEEEEEEeC
Confidence 011234445555554 55 58887775 33333344576 56889884
No 8
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=100.00 E-value=3.8e-39 Score=321.15 Aligned_cols=248 Identities=22% Similarity=0.260 Sum_probs=183.3
Q ss_pred CCeEEe---eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccC
Q 012453 142 GAPIQA---HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLY 218 (463)
Q Consensus 142 Gnpi~a---hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~ 218 (463)
.|||+. .||.|+++ +++|||++|... ...+|.||+|+||+||+.++.+++..
T Consensus 7 ~nPv~~~~~~DP~i~~~--~~~yY~~~t~~~--------------~~~gi~i~~S~DL~~W~~~g~~~~~~--------- 61 (280)
T cd09002 7 RNPILAGDYPDPSILRD--GEDYYMTHSSFK--------------YTPGLVIWHSRDLVNWTPVGPALPEY--------- 61 (280)
T ss_pred eCCccCCCCCCCEEEEE--CCEEEEEEcchh--------------cCCCEEEEECCCcCCceEccccccCC---------
Confidence 466643 58999986 589999887421 23579999999999999999887642
Q ss_pred CCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEec
Q 012453 219 KLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 219 ~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~ 298 (463)
.+.+|||++++ .+|||||||++...+ ...+|+||+|++|+|||++..... ....|||+||+|+||+.||+|+
T Consensus 62 -~~~~WAP~i~~--~~gkyy~yys~~~~~-~~~~~~va~ad~p~Gpw~~~~~~~--~~~~IDp~vf~DddG~~Yl~~~-- 133 (280)
T cd09002 62 -EGDVWAPDLCK--YDGRYYIYFPAIPEG-GNWTNMVIWADSPEGPWSKPIDLK--IGGCIDPGHVVDEDGNRYLFLS-- 133 (280)
T ss_pred -CCCEEcCeeEE--ECCEEEEEEEeecCC-CCceEEEEEECCCCCCCcCCEecC--CCCccCCceEEcCCCCEEEEEC--
Confidence 24589999997 899999999987643 357899999999999999754221 1236999999999999999996
Q ss_pred CCCcEEEEEcCCCCCCccccEEEeec-----------CceeeeeEEEEECCEEEEEEeCCCCCCC--CcEEE-EEeCCCC
Q 012453 299 DNSELHIGPLTSDYLDVSNVVRRILV-----------GQHREAPALFKHLGTYYMVTSGCTGWAP--NEALV-HAAESIM 364 (463)
Q Consensus 299 ~n~~i~ia~Ls~D~~~~~g~~~~i~~-----------~~~~EgP~vfK~~G~YYL~yS~~tg~~~--n~~v~-~~S~s~~ 364 (463)
.+.+++|++|+++++++...+.. +..+|||+|+|+||+||||||.+.++.+ .+.+. ++|++|+
T Consensus 134 ---~~~~~~l~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~g~YYl~yS~g~~~~~~~~~~v~~ars~s~~ 210 (280)
T cd09002 134 ---GGDRVRLTADGLSTDGKLEHVYDGWRYPEDWVVEGFALEGPKLKKRNGYYYLTTAVGGTAGPPTGHMVVAARSKSVH 210 (280)
T ss_pred ---CeeEEEECccccEecCcCEEEecCcccccccccCCcccccceEEEECCEEEEEEccCCCCCCCCCEEEEEEECCCCC
Confidence 35688999999999887665542 2358999999999999999995433333 24454 5899999
Q ss_pred CCceeC-CCccccCCcccceeccCCCceEEEcc-cCCcccEEEEEeEeCCCCCCCCeeE-EEEEEEcC
Q 012453 365 GPWEDM-GNPCIGGNKVFRLTTFFAQSTYVIPL-AGLPGLYIFMADRWNPADLRESRYI-WLPLIVRG 429 (463)
Q Consensus 365 GPw~~~-g~Pv~~~~~~~~~~t~~sq~~~V~~~-~G~~~~yi~~~d~w~~~~~~~~R~v-~lPi~~~~ 429 (463)
|||++. ++|++..... ...-.+.+|++|+.. +| +||++||.. ........|.+ ..||+|++
T Consensus 211 GP~~~~~~~pi~~~~~~-~~~~~g~GH~~i~~~~~g--~~~~vyH~~-~~~~~~~gR~~~l~~l~w~~ 274 (280)
T cd09002 211 GPWENSPYNPLVRTQSP-QEPWWSKGHATLVDGPDG--QWWMVYHAY-EKGYLTLGRQTLLEPIEWTE 274 (280)
T ss_pred CCCccCCCCcEEecCCC-CCCceeCCCCcEEECCCC--CEEEEEEee-cCCCCCCCcEEEEEEEEECC
Confidence 999998 6888864210 011124455667765 44 688888753 22222335775 57999975
No 9
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=100.00 E-value=3.3e-39 Score=319.32 Aligned_cols=256 Identities=27% Similarity=0.360 Sum_probs=192.6
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeec
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP 226 (463)
.+||.|++. +++||+|+|+... ..+|.|++|+||+||+.++.+|......+. ......|||
T Consensus 10 ~~DP~i~~~--~~~yY~~~t~~~~--------------~~~i~v~~S~DL~~W~~~g~~~~~~~~~~~---~~~~~~WAP 70 (286)
T PF04616_consen 10 YADPSIVRF--GDGYYLYGTTDPE--------------GPGIPVWSSKDLVNWTDAGNVLPPPPDWDW---ANNGNIWAP 70 (286)
T ss_dssp ECSEEEEEE--TTEEEEEEEEBTC--------------ESBEEEEEESSSSSEEEEEECESSTTTTST---TTSETTEEE
T ss_pred CCCCEEEEE--CCEEEEEEEcCCC--------------CCeEEEEECCCCcccccceeeecccccccc---cccccccCC
Confidence 368999986 4779999987531 267999999999999999998876543321 112223999
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEecCC----Cc
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDN----SE 302 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~n----~~ 302 (463)
+|++ .+|+|||||+.... ....+|+||+|++|+|||++.+.....+..+|||+||+|+||+.||+|+++.+ +.
T Consensus 71 ~i~~--~~g~yy~y~~~~~~-~~~~~~~va~a~~~~Gp~~~~~~~~~~~~~~iD~~vf~d~dG~~Yl~~~~~~~~~~~~~ 147 (286)
T PF04616_consen 71 EIHY--INGKYYMYYSDSGG-DAGSGIGVATADSPDGPWTDPGKIPIPGGNSIDPSVFVDDDGKYYLYYGSWDNGDPGGG 147 (286)
T ss_dssp EEEE--ETTEEEEEEEEEST-STTEEEEEEEESSTTS-EEEEEEEEEESSSSSSEEEEEETTSEEEEEEEESTTTSSEEE
T ss_pred eEEE--cCCeEEEEEEccCC-CCCcceeEEEeCCcccccccccceeeccccccCceEEEecCCCcEEeCcccCCCcccee
Confidence 9997 79999999993322 24578999999999999998765432367899999999999999999999754 36
Q ss_pred EEEEEcCCCCCCccccE-EEeec------CceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEE-EeCCCCCCceeC-CCc
Q 012453 303 LHIGPLTSDYLDVSNVV-RRILV------GQHREAPALFKHLGTYYMVTSGCTGWAPNEALVH-AAESIMGPWEDM-GNP 373 (463)
Q Consensus 303 i~ia~Ls~D~~~~~g~~-~~i~~------~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~-~S~s~~GPw~~~-g~P 373 (463)
|.+++|++|++.+.++. ..+.. ...+|||+|+|++|+|||+||++....+ |.+.+ +|++|+|||+.. +++
T Consensus 148 i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~g~yYl~~s~~~~~~~-y~v~~~~s~~~~gp~~~~~~~~ 226 (286)
T PF04616_consen 148 IYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHGGKYYLFYSAGGTGSP-YQVGYARSDSPLGPWEWKKGNP 226 (286)
T ss_dssp EEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEETTEEEEEEEESGSSTT-TEEEEEEESSTTSGGEETTTCB
T ss_pred EEeecccCccccccCcccccccccccccCCccccceEEEEcCCCEEEEEeccCCCCC-ceEEEeeccCCCCceeeccCCe
Confidence 99999999999988877 44433 2489999999999999999996554444 76664 899999999987 556
Q ss_pred cccC-CcccceeccCCCceEEEcc-cCCcccEEEEEeEeC-CCCCCCCee-EEEEEEEcC
Q 012453 374 CIGG-NKVFRLTTFFAQSTYVIPL-AGLPGLYIFMADRWN-PADLRESRY-IWLPLIVRG 429 (463)
Q Consensus 374 v~~~-~~~~~~~t~~sq~~~V~~~-~G~~~~yi~~~d~w~-~~~~~~~R~-v~lPi~~~~ 429 (463)
++.. ... ....+.+|++|+.. +| +||++||.+-. .......|+ .+.||.|++
T Consensus 227 ~~~~~~~~--~~~~g~gH~~~~~~~~g--~~~~~yh~~~~~~~~~~~~R~~~i~~v~~~~ 282 (286)
T PF04616_consen 227 ILFSRDGE--NGVYGPGHGSVFKDPDG--RWYIVYHARNPGGGGTGGGRSTRIQPVTWDA 282 (286)
T ss_dssp CEGTTBTT--SSCEEEEEEEEEEETTS--EEEEEEEEEETSTSTGTTCEEEEEEEEEEET
T ss_pred EEEeeccC--CccccCccCCEEECCCC--CEEEEEeeccCCCCCCCCCcEEEEEEEEECC
Confidence 5442 111 23455556667665 44 48888887665 233455676 558999996
No 10
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=100.00 E-value=6.8e-39 Score=319.78 Aligned_cols=258 Identities=19% Similarity=0.238 Sum_probs=188.7
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeec
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP 226 (463)
..||.|++. +|+||++.|... ...+|.|++|+||++|+.+|.+|+.............+.+|||
T Consensus 8 ~~DP~i~~~--~~~yy~~~t~~~--------------~~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP 71 (288)
T cd09000 8 YPDPSICRV--GDDYYLVTSSFE--------------YFPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAP 71 (288)
T ss_pred CCCCCEEEE--CCEEEEEECCcc--------------cCCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcc
Confidence 458899986 489999976321 1257999999999999999999875432111111245679999
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEecC-------
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSED------- 299 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~------- 299 (463)
+|++ .+|+|||||++.... ...+++||+|++|+|||++.... ....|||++|+|+||+.||+|+++.
T Consensus 72 ~v~~--~~g~yy~yy~~~~~~-~~~~~~v~~s~~p~gpw~~~~~~---~~~~iDp~vf~d~dG~~Y~~~~~~~~~~~~~~ 145 (288)
T cd09000 72 TIRY--HDGTFYLITTNVDGM-KDGGNFIVTADDPAGPWSDPVWL---DSGGIDPSLFFDDDGKVYLVGNGWDERRGYNG 145 (288)
T ss_pred eEEE--ECCEEEEEEEecCCC-CCCceEEEEeCCCCCCCcCCEec---CCCccCCceeEcCCCCEEEEecccCCccccCC
Confidence 9998 699999999987543 34689999999999999964321 2278999999999999999999753
Q ss_pred CCcEEEEEcCCCCCCccccEEEeecC---ceeeeeEEEEECCEEEEEEeCCCCCCCCcEEE-EEeCCCCCCceeC-CCcc
Q 012453 300 NSELHIGPLTSDYLDVSNVVRRILVG---QHREAPALFKHLGTYYMVTSGCTGWAPNEALV-HAAESIMGPWEDM-GNPC 374 (463)
Q Consensus 300 n~~i~ia~Ls~D~~~~~g~~~~i~~~---~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~-~~S~s~~GPw~~~-g~Pv 374 (463)
.+.|++++|++|+.++.+++..+..+ .+.|||+|+|++|+||||||.+.. ..++.+. ++|++|+|||+++ ++|+
T Consensus 146 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~g~YYl~ys~~~~-~~~~~v~~~~s~~~~Gp~~~~~~~~i 224 (288)
T cd09000 146 HGGIWLQEIDLETGKLLGEPKVIWNGTGGRWPEGPHLYKRDGWYYLLIAEGGT-GYGHSVTVARSRSITGPYEPAPNNPI 224 (288)
T ss_pred CCcEEEEEEccccCCCCCCcEEEEeCCCCCCcccCeEEEECCEEEEEEecCCC-CCCeEEEEEEeCCCCCCCccCCCCce
Confidence 25799999999988888877666543 589999999999999999996431 2345555 4899999999986 6787
Q ss_pred ccCCcccceeccCCCceEEEcc-cCCcccEEEEEeEeCCC---CCCCCee-EEEEEEEcC
Q 012453 375 IGGNKVFRLTTFFAQSTYVIPL-AGLPGLYIFMADRWNPA---DLRESRY-IWLPLIVRG 429 (463)
Q Consensus 375 ~~~~~~~~~~t~~sq~~~V~~~-~G~~~~yi~~~d~w~~~---~~~~~R~-v~lPi~~~~ 429 (463)
+.........-.+.+|++|++. +| +||++||.+-... .....|. ...+|.|++
T Consensus 225 l~~~~~~~~~~~g~gH~~~~~~~dG--~~~~~yH~~~~~~~~~~~~~~R~~~i~~~~~~~ 282 (288)
T cd09000 225 LTNRDLPDSPIQATGHADLVQTPDG--EWWAVFLATRPYGGKGFCPLGRETFLAPVTWEE 282 (288)
T ss_pred EEcCCCCCCcceeCCccceEECCCC--CEEEEEEEEcCCCCCccCcCccccEEEEEEECC
Confidence 7643100112234555567665 44 6888888643222 2244676 458999985
No 11
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=100.00 E-value=5.3e-39 Score=318.23 Aligned_cols=245 Identities=19% Similarity=0.261 Sum_probs=177.8
Q ss_pred CeEE---eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcc-----cc
Q 012453 143 APIQ---AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETN-----ET 214 (463)
Q Consensus 143 npi~---ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~-----~~ 214 (463)
|||. .+||.|++. +++||+|+|+.. .+++|.|++|+||+||+.++.+++..+.. +.
T Consensus 4 NPv~~~~~~DP~v~~~--~~~yY~~~t~~~--------------~~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~ 67 (269)
T cd09001 4 NPIIYADYPDPDVIRV--GDDYYMVSTTMH--------------YSPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLEN 67 (269)
T ss_pred CCccCCCCCCCeEEEE--CCEEEEEECCcc--------------cCCCCEEEEcccccCCeEcccccccccccccccccc
Confidence 5553 379999986 589999998531 13679999999999999999988654321 11
Q ss_pred cccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEE
Q 012453 215 HDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLV 294 (463)
Q Consensus 215 ~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~ 294 (463)
........+|||+|++ .+|||||||++. ..+++||+|++|+|||++.+... .+|||++|+|+||+.||+
T Consensus 68 ~~~~~~~~~WAP~v~~--~~gkyy~yys~~-----~~~~~v~~a~~p~Gpw~~~~~~~----~~iDp~~f~D~dG~~Yl~ 136 (269)
T cd09001 68 GGNAYGKGQWAPSLRY--HNGTFYVFFCTN-----TGGTYIYTADDPEGPWTKTALDG----GYHDPSLLFDDDGTAYLV 136 (269)
T ss_pred cCCCCCCCEECCceEE--ECCEEEEEEEec-----CCCeEEEEcCCCCCCCcCCCcCC----CcccCceEEcCCCCEEEE
Confidence 0111245699999998 699999999985 24689999999999999875321 689999999999999999
Q ss_pred EEecCCCcEEEEEcCCCCCCccccEEEeec-----CceeeeeEEEEECCEEEEEEeCCCCCCCCcEE-EEEeCCCCCCce
Q 012453 295 YSSEDNSELHIGPLTSDYLDVSNVVRRILV-----GQHREAPALFKHLGTYYMVTSGCTGWAPNEAL-VHAAESIMGPWE 368 (463)
Q Consensus 295 yg~~~n~~i~ia~Ls~D~~~~~g~~~~i~~-----~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v-~~~S~s~~GPw~ 368 (463)
|++. .|+++||++|++++.++...+.. ...+|||+|+|++|+||||||+.. ...+.+ +++|++|+|||+
T Consensus 137 ~~~~---~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~G~YYl~~S~~~--~~~~~~~~~~s~~~~GP~~ 211 (269)
T cd09001 137 YGGG---TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKINGYYYIFNIAWG--GGGRTQTCLRSKSLTGPYE 211 (269)
T ss_pred eCCC---cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEECCEEEEEEecCC--CCCceEEEEEeCCCCCCcC
Confidence 9853 79999999999998766555543 258999999999999999999754 223444 458999999999
Q ss_pred eCCCccccCCcccceeccCCCceEEEcc-cCCcccEEEEEeEeCCCCCCCCeeEEEEEEEcC
Q 012453 369 DMGNPCIGGNKVFRLTTFFAQSTYVIPL-AGLPGLYIFMADRWNPADLRESRYIWLPLIVRG 429 (463)
Q Consensus 369 ~~g~Pv~~~~~~~~~~t~~sq~~~V~~~-~G~~~~yi~~~d~w~~~~~~~~R~v~lPi~~~~ 429 (463)
... ++.... ....+.+|+++++. +| +||+++|+.. . ...++....||.|++
T Consensus 212 ~~~--~~~~~~---~~~~~~gh~~~~~~~~G--~~~~~~~~~~-~--~~gR~~~~~~~~w~d 263 (269)
T cd09001 212 SKV--VLEDGS---TGGNGPHQGGIVDTPDG--EWYFMLFQDR-G--AVGRIPHLAPVTWED 263 (269)
T ss_pred Ccc--eecCCC---CCCCCCCCEEEEECCCC--CEEEEEcCCC-C--CCCCEEEEEEEEEEC
Confidence 864 332111 11233344456655 45 5666665422 1 122334668999973
No 12
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=100.00 E-value=2.8e-38 Score=313.74 Aligned_cols=254 Identities=23% Similarity=0.281 Sum_probs=191.3
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeec
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP 226 (463)
.+||+|++. +|+||||+|... ..++.+++|+||++|+.++.+|+..+. | ...+.+|||
T Consensus 8 ~~DP~i~~~--~g~yy~~~t~~~---------------~~~i~~~~S~Dl~~W~~~g~~l~~~~~-~----~~~~~~waP 65 (287)
T cd08999 8 FPDPSVIRV--DGTYYAYATNGN---------------GPNVPIATSTDLVNWTYLGDAFPKLPR-W----WTGGDFWAP 65 (287)
T ss_pred CCCCeEEEE--CCEEEEEEeCCC---------------CCcEEEEECCCCCCcEECCcccCCCCC-c----ccCCCccCc
Confidence 479999986 599999999632 146999999999999999998876542 1 235679999
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccC----CCCCCccCceEEEcCCCcEEEEEEecCC--
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKR----PHGFDSRDMTIFKDDDGVAYLVYSSEDN-- 300 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~----p~g~~siDp~vF~DdDG~~YL~yg~~~n-- 300 (463)
+|++ .+|+|||||++........+|++|+|++|+|||+..+... ..+...|||+||+|+||++||+|++..+
T Consensus 66 ~v~~--~~g~y~~~y~~~~~~~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~~Yl~~~~~~~~~ 143 (287)
T cd08999 66 DVSY--VNGKYVLYYSARDKGSGGQCIGVATADSPLGPFTDHGKPPLCCPEGEGGAIDPSFFTDTDGKRYLVWKSDGNSI 143 (287)
T ss_pred eEEE--ECCEEEEEEEeecCCCCCEEEEEEECCCCCCCCccCCcceEecCCCCCCccCCCeEECCCCCEEEEEeccCCCC
Confidence 9998 6799999999876533467899999999999999865422 2346789999999999999999997532
Q ss_pred ---CcEEEEEcCCCCCCccccEEEee------cCceeeeeEEEEECCEEEEEEeCCCCCCC--CcEEEE-EeCCCCCCce
Q 012453 301 ---SELHIGPLTSDYLDVSNVVRRIL------VGQHREAPALFKHLGTYYMVTSGCTGWAP--NEALVH-AAESIMGPWE 368 (463)
Q Consensus 301 ---~~i~ia~Ls~D~~~~~g~~~~i~------~~~~~EgP~vfK~~G~YYL~yS~~tg~~~--n~~v~~-~S~s~~GPw~ 368 (463)
..++++||++|++.+.++...++ .+..+|||.|+|++|+|||+||....+.. +|.+.+ +|++|+|||+
T Consensus 144 ~~~~~i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~g~yyl~~S~~~~~~~~~~y~i~~~~s~~~~Gpw~ 223 (287)
T cd08999 144 GKPTPIYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRGGYYYLFYSAGGCCSGASTYAVGVARSKSLLGPYV 223 (287)
T ss_pred CCCceEEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEECCEEEEEEEcCCccCCCCCEEEEEEEeCCCcCCcC
Confidence 23889999999998888766553 23579999999999999999997543333 677764 8999999999
Q ss_pred eC-CCccccCCcccceeccCCCceEEEcc-cCCcccEEEEEeEeCCCCCCCCeeE-EEEEEEc
Q 012453 369 DM-GNPCIGGNKVFRLTTFFAQSTYVIPL-AGLPGLYIFMADRWNPADLRESRYI-WLPLIVR 428 (463)
Q Consensus 369 ~~-g~Pv~~~~~~~~~~t~~sq~~~V~~~-~G~~~~yi~~~d~w~~~~~~~~R~v-~lPi~~~ 428 (463)
++ ++|+...+.. ....+.+|++++.. +| +||++||.+..++.....|++ ..||.|+
T Consensus 224 ~~~~~~~~~~~~~--~~~~g~gh~~~~~~~~g--~~~~~yh~~~~~~~~~~~R~~~i~~~~~~ 282 (287)
T cd08999 224 KAPGPPLLTSSGN--GRWVGPGHNTVVTDDDG--RDWLLYHAWDKADSGFTGRQMYLDRLEWE 282 (287)
T ss_pred CCCCCcceeccCC--CeEEcCCCCeEEECCCC--CEEEEEEEEcCCCCCCCCceEEEEEEEeE
Confidence 98 4556541111 12234444445544 45 689999877665434456664 4799994
No 13
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=100.00 E-value=3.8e-38 Score=314.50 Aligned_cols=255 Identities=27% Similarity=0.356 Sum_probs=194.8
Q ss_pred CCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceE
Q 012453 149 GGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKV 228 (463)
Q Consensus 149 d~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~v 228 (463)
||+|++++ |+||||+|.... ..+|.+++|+||++|+.++.++...+..| ....+|||+|
T Consensus 2 DP~v~~~~--g~yyl~~t~~~~--------------~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~-----~~~~~waP~v 60 (294)
T cd08991 2 DPFVLRYN--GKYYAYGTGGAD--------------GRGFAVYSSPDLVDWKLHGGALLALDDDW-----GRRGFWAPEV 60 (294)
T ss_pred CCeEEEEC--CEEEEEEeCCCC--------------CCeeEEEECCCCCCceECCccccCCCCCc-----cCCcEEccEE
Confidence 68899874 899999986431 24699999999999999999887654333 3567999999
Q ss_pred EEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceecccc-CCCCCCccCceEEEcCCCcEEEEEEecCC----CcE
Q 012453 229 IYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSK-RPHGFDSRDMTIFKDDDGVAYLVYSSEDN----SEL 303 (463)
Q Consensus 229 i~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~-~p~g~~siDp~vF~DdDG~~YL~yg~~~n----~~i 303 (463)
++ .+|+|||||++...+....+|+||+|++|+|||++.+.. ...+...|||++|+|+||++||+|+...+ ..|
T Consensus 61 ~~--~~g~yyl~ys~~~~~~~~~~i~~a~s~~p~gp~~~~~~~~~~~~~~~iD~~vf~d~dG~~yl~~~~~~~~~~~~~i 138 (294)
T cd08991 61 YY--YNGKFYMYYSANDRDEKTEHIGVAVSDSPLGPFRDIKKPPIDFEPKSIDAHPFIDDDGKPYLYYSRNNYGNRVSDI 138 (294)
T ss_pred EE--ECCEEEEEEEeccCCCCcceEEEEEeCCCCCCCCcCCCCcccCCCcccCCceEECCCCCEEEEEEecCCCCcccce
Confidence 98 789999999987654456899999999999999986532 22345789999999999999999987543 358
Q ss_pred EEEEcCCCCCCccccEEEee---------------------cCceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEE-EeC
Q 012453 304 HIGPLTSDYLDVSNVVRRIL---------------------VGQHREAPALFKHLGTYYMVTSGCTGWAPNEALVH-AAE 361 (463)
Q Consensus 304 ~ia~Ls~D~~~~~g~~~~i~---------------------~~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~-~S~ 361 (463)
.+++|+.|++++.++...+. .....|||+|+|++|+|||+||++.++..+|.+.+ +|+
T Consensus 139 ~~~~l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~g~yyl~ys~~~~~~~~y~~~~a~s~ 218 (294)
T cd08991 139 YGTELVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHNGRYYLTYSANHYENEDYGVGYATAD 218 (294)
T ss_pred EEEEEccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEECCEEEEEEECCCCCCCCceEEEEEcC
Confidence 99999999988765543211 12479999999999999999997655566777765 799
Q ss_pred CCCCCceeC-CCccccCCcccceeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCeeEE-EEEEEcC
Q 012453 362 SIMGPWEDM-GNPCIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESRYIW-LPLIVRG 429 (463)
Q Consensus 362 s~~GPw~~~-g~Pv~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R~v~-lPi~~~~ 429 (463)
+|+|||++. ++||+..+.. ....+.+|++|++.++...+|++||.+....+. ..|+++ .||.|++
T Consensus 219 ~~~gp~~~~~~~pl~~~~~~--~~~~g~gh~~~~~~~~g~~~~~~yh~~~~~~~~-~~R~~~~~~~~~~~ 285 (294)
T cd08991 219 SPLGPWTKYSNNPILRRNGD--KGVEGTGHNSVVKSPDGGELYIVYHAHNATDEV-EPRTMRIDPLYFKD 285 (294)
T ss_pred CCCCCcEecCCCceEeeCCC--CceEeCCCCceEECCCCCEEEEEEeeecCCCCC-CCceEEEEEEEEcC
Confidence 999999997 7898875421 123456666677665312678888876655333 567755 8999986
No 14
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=100.00 E-value=2e-37 Score=309.09 Aligned_cols=256 Identities=21% Similarity=0.222 Sum_probs=186.9
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccc--cccCCCCeee
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNET--HDLYKLNVLE 224 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~--~~~~~~~~iW 224 (463)
+|||.|++.+ ++||+|+|.. +|.|++|+||++|+.++.+|...+. |. .+....+.+|
T Consensus 1 ~~DP~v~~~~--~~yyl~~t~~------------------~i~i~~S~Dl~~W~~~g~~~~~~~~-~~~~~~~~~~~~~w 59 (288)
T cd08998 1 VHDPSIIKEG--DTYYLFSTGN------------------GIAIAKSKDLGNWTYVGSVFPTGPP-WWSSIDPGGSGNLW 59 (288)
T ss_pred CCCCeEEEEC--CEEEEEEcCC------------------CeEEEECCCCCCcEECCccccCCCc-cccccccCCCCCcc
Confidence 3789999874 7999999842 5899999999999999998875432 10 1122456799
Q ss_pred eceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCC-CCCceeccccCC-----CCCCccCceEEEcCCCcEEEEEEec
Q 012453 225 RPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYP-TGPFDYLYSKRP-----HGFDSRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 225 AP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP-~GPf~~~~~~~p-----~g~~siDp~vF~DdDG~~YL~yg~~ 298 (463)
||+|++ .+|+|||||++........+|+||+|++| +|||++.+.... .+...|||++|+|+||+.||+|++.
T Consensus 60 AP~v~~--~~g~yyl~ys~~~~~~~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~~~~~ 137 (288)
T cd08998 60 APDVIY--LNGKYYLYYSVSTFGSNRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLSFGSF 137 (288)
T ss_pred CCeEEE--ECCEEEEEEEEEeCCCCceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEEeeec
Confidence 999998 69999999998754445678999999999 999998653211 2346899999999999999999975
Q ss_pred CCCcEEEEEcCCCCCCccc---cEEEeec----CceeeeeEEEEECCEEEEEEeCCCCC---CCCcEEEE-EeCCCCCCc
Q 012453 299 DNSELHIGPLTSDYLDVSN---VVRRILV----GQHREAPALFKHLGTYYMVTSGCTGW---APNEALVH-AAESIMGPW 367 (463)
Q Consensus 299 ~n~~i~ia~Ls~D~~~~~g---~~~~i~~----~~~~EgP~vfK~~G~YYL~yS~~tg~---~~n~~v~~-~S~s~~GPw 367 (463)
. +.|.+++|++|...... ..+.+.. ....|||+|+|++|+||||||.+... ..+|.+.+ +|++|+|||
T Consensus 138 ~-~~i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~g~YYl~~S~~~~~~~~~~~y~v~~~~s~~~~GP~ 216 (288)
T cd08998 138 W-GGIFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRGGYYYLFVSYGGCCAGEDSTYNIRVGRSKSITGPY 216 (288)
T ss_pred c-CCEEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeCCEEEEEEEcchhcCCCCCceEEEEEEcCCCCCCc
Confidence 3 57999999998433322 2344443 34799999999999999999964322 45677754 899999999
Q ss_pred eeC-CCccccCCcc---c--ceeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCee-EEEEEEEcC
Q 012453 368 EDM-GNPCIGGNKV---F--RLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESRY-IWLPLIVRG 429 (463)
Q Consensus 368 ~~~-g~Pv~~~~~~---~--~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R~-v~lPi~~~~ 429 (463)
+.. ++|++..... + ...-.+.+|++++..++ .+||++||.+..+. ...|. .+.||.|++
T Consensus 217 ~~~~g~~~~~~~~~~~~~~~~~~~~g~GH~~~~~~~~-g~~~~~yH~~~~~~--~~~r~~~i~~l~w~~ 282 (288)
T cd08998 217 VDRNGNDMLNGGGTLYLLSSNGGYVGPGHNSVFTDDD-GKDYLVYHYYDAND--GGDHELRIRQLFWNE 282 (288)
T ss_pred CCCCCCchhhCCCcceeeccCCeEEcCCCCEEEECCC-CCEEEEEEEEeCCC--CCccEEEEEEEEECC
Confidence 975 7887653210 0 01223444555665443 26899998776552 33465 558999975
No 15
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=100.00 E-value=5e-37 Score=304.18 Aligned_cols=233 Identities=20% Similarity=0.306 Sum_probs=171.0
Q ss_pred eCCceEEECCCCEEEEEEEecCCC-CcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCccc-----c-cccCCC
Q 012453 148 HGGGILYDERSRTYFWYGEYKDGP-TYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNE-----T-HDLYKL 220 (463)
Q Consensus 148 hd~~I~~~~~~g~YYlygT~~~g~-~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~-----~-~~~~~~ 220 (463)
|||.|++++ +|+|||++|..... .+...+ ....+|.||+|+||+||+.++.+++..+... . ...+..
T Consensus 3 rDP~v~~~~-dg~Yy~~~T~~~~~~~~~~~~-----~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~ 76 (269)
T cd08986 3 RDTYVTLGP-DGYYYLTGTTPPPGLPFEDCS-----IVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYK 76 (269)
T ss_pred cCCeEEecC-CCcEEEEEccCCccccccccc-----cCCCceEEEeCccccCccccCcccccCCcccccccccccCCccc
Confidence 689999864 57999999975311 100000 1346899999999999999999987543210 0 011235
Q ss_pred CeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEecCC
Q 012453 221 NVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDN 300 (463)
Q Consensus 221 ~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~n 300 (463)
+.+|||+|++ .+|+|||||++...+....+|+||+|++|+|||++..... .....|||++|+|+||+.||+|++.
T Consensus 77 ~~~WAP~v~~--~~g~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~~-~~~~~iD~~~f~D~DG~~Yl~~~~~-- 151 (269)
T cd08986 77 NAVWAPELHY--IKGRWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGNK-PLFPGIDPSLFEDDDGKVYLVWHNT-- 151 (269)
T ss_pred CCcCCceEEE--ECCEEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCCC-CCCCccCCceEEcCCCCEEEEeeCC--
Confidence 6799999998 7899999999875444567899999999999999864321 2246899999999999999999842
Q ss_pred CcEEEEEcCCCCCCccccEEEeec-------CceeeeeEEEEECCEEEEEEeCCC---CCCCCcEEE-EEeCCCCCCcee
Q 012453 301 SELHIGPLTSDYLDVSNVVRRILV-------GQHREAPALFKHLGTYYMVTSGCT---GWAPNEALV-HAAESIMGPWED 369 (463)
Q Consensus 301 ~~i~ia~Ls~D~~~~~g~~~~i~~-------~~~~EgP~vfK~~G~YYL~yS~~t---g~~~n~~v~-~~S~s~~GPw~~ 369 (463)
.+++|++|++++.+++..+.. +..+|||+|+|++|+||||||... +-..+|.+. ++|++|+|||++
T Consensus 152 ---~i~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~G~YYL~yS~~~~~~~~~~~y~v~va~S~s~~GPy~~ 228 (269)
T cd08986 152 ---LIARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYGGKYYLFGTAWSTDKGRKGSYDLYYAVADKITGPYGA 228 (269)
T ss_pred ---ceEeccCccccccCCcEEEecccccccCCccccccEEEEECCEEEEEEeecCCCCCCCCceEEEEEEcCCCCCCccc
Confidence 478999999988888766653 247999999999999999998531 223456665 489999999999
Q ss_pred CCCccccCCcccceeccCCCceEEEc-ccCCcccEEEEE
Q 012453 370 MGNPCIGGNKVFRLTTFFAQSTYVIP-LAGLPGLYIFMA 407 (463)
Q Consensus 370 ~g~Pv~~~~~~~~~~t~~sq~~~V~~-~~G~~~~yi~~~ 407 (463)
...++.+ .+ |+.++. .+| +||++||
T Consensus 229 ~~~~~~g---------~G--h~~~v~~~~G--~~~~~~h 254 (269)
T cd08986 229 RYFAGRF---------LG--HNTPFQDLDG--RWWCTAF 254 (269)
T ss_pred cCccccc---------cC--CCceEECCCC--CEEEEEE
Confidence 8665421 22 233444 444 5777776
No 16
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=100.00 E-value=2.9e-36 Score=302.60 Aligned_cols=233 Identities=16% Similarity=0.120 Sum_probs=173.0
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeec
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP 226 (463)
.+||.|++. +|+||+|+|... .||+|+||+||+.++.++. ...+|||
T Consensus 3 ~~DP~i~~~--~g~YY~~~T~~~-------------------~i~~S~DL~~W~~~g~~~~------------~~~~WAP 49 (295)
T cd08982 3 AADPVVILF--KGEYYLFASMSG-------------------GYWHSSDLIDWDFIPTNSL------------PDEGYAP 49 (295)
T ss_pred CCCCeEEEE--CCEEEEEEeCCC-------------------CeEECCCcCCceECCcccC------------CCCcCcC
Confidence 368899986 599999998521 2799999999999998753 2358999
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCC-ceeccccCCCCCCccCceEEEcCCCcEEEEEEecCCCcEEE
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGP-FDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDNSELHI 305 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GP-f~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~n~~i~i 305 (463)
+|++ .+|+|||+++.. .++||+|++|+|| |+... .......|||++|+|+||+.||+|++..++.|++
T Consensus 50 ~i~~--~~g~~Y~~~~~~-------~~~v~~s~~p~gp~w~~~~--~~~~~~~IDp~vf~DdDGk~Yl~~g~~~~~~i~~ 118 (295)
T cd08982 50 AVFV--YDGTLYYTASTY-------NSRIYKTADPLSGPWEEVD--KSFPPGLADPALFIDDDGRLYLYYGCSNNYPLRG 118 (295)
T ss_pred EEEE--ECCEEEEEEeCC-------CceEEEeCCCCCCCccccc--cccCCCccCCceEECCCCCEEEEEecCCCCCeEE
Confidence 9998 789988776642 2568999999976 55531 1234568999999999999999998754567999
Q ss_pred EEcCCCCCCccccEEEeec--------------------CceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEE-EeCCCC
Q 012453 306 GPLTSDYLDVSNVVRRILV--------------------GQHREAPALFKHLGTYYMVTSGCTGWAPNEALVH-AAESIM 364 (463)
Q Consensus 306 a~Ls~D~~~~~g~~~~i~~--------------------~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~-~S~s~~ 364 (463)
+||++|+.++.|+...+.. ..+.|||+|+|+||+|||+||....+..+|.+.+ +|++|+
T Consensus 119 ~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~ 198 (295)
T cd08982 119 VEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL 198 (295)
T ss_pred EEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC
Confidence 9999999888887665431 2378999999999999999997544556677764 899999
Q ss_pred CCceeC-CCccccCCcccceeccCCCceEEE-cccCCcccEEEEEeEeCCCCCCCCee-EEEEEEEcC
Q 012453 365 GPWEDM-GNPCIGGNKVFRLTTFFAQSTYVI-PLAGLPGLYIFMADRWNPADLRESRY-IWLPLIVRG 429 (463)
Q Consensus 365 GPw~~~-g~Pv~~~~~~~~~~t~~sq~~~V~-~~~G~~~~yi~~~d~w~~~~~~~~R~-v~lPi~~~~ 429 (463)
|||+.. ++|++.... ....+.+|++++ ..+| +||++|| ++...+....|. .+.||.|++
T Consensus 199 GP~~~~~~~pil~~~~---~~~~g~GH~s~v~~~~G--~~~~~yh-~~~~~~~~~~R~~~i~pv~~~~ 260 (295)
T cd08982 199 GPFTYQPHNPFSYKPG---GFITGAGHGSTFQDKYG--NYWHVGT-MTVSVKHGFERRIGLFPAFFDE 260 (295)
T ss_pred CCCCcCCCCccccCCC---CeEecCCcccEEECCCC--CEEEEEE-EECCCCCCCCceeEEEEEEECC
Confidence 999987 578875421 112233444454 4555 6777776 565543333454 668999986
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=100.00 E-value=6.7e-36 Score=292.20 Aligned_cols=255 Identities=28% Similarity=0.381 Sum_probs=188.9
Q ss_pred eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceeccc--CCcccccccCCCCeeee
Q 012453 148 HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAA--EETNETHDLYKLNVLER 225 (463)
Q Consensus 148 hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~--~~~~~~~~~~~~~~iWA 225 (463)
+||+|++. +|+||||+|.... ...++.+++|+||++|+.++.++.. .... ......+||
T Consensus 1 ~DP~v~~~--~~~yyl~~t~~~~-------------~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~----~~~~~~~wa 61 (271)
T cd08978 1 ADPYILRY--NGKYYLYGSTDDA-------------AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGE----AKDSGGLWA 61 (271)
T ss_pred CCCcEEEE--CCEEEEEEecCCc-------------CCCcEEEEECCccCCcEECCcccccccccCC----cccCCceeC
Confidence 57899986 4799999996431 1357999999999999999988752 1111 123567999
Q ss_pred ceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceecc--ccCCCCCCccCceEEEcCCCcEEEEEEecC----
Q 012453 226 PKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLY--SKRPHGFDSRDMTIFKDDDGVAYLVYSSED---- 299 (463)
Q Consensus 226 P~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~--~~~p~g~~siDp~vF~DdDG~~YL~yg~~~---- 299 (463)
|+|++ .+|+|||||++...+....+|+||+|++|+|||+... .....+...|||+||+|+||+.||+|++..
T Consensus 62 P~v~~--~~g~yyl~y~~~~~~~~~~~i~~a~s~d~~g~~~~~~~~~~~~~~~~~iDp~vf~d~dg~~yl~~~~~~~~~~ 139 (271)
T cd08978 62 PEVIY--YEGKYYLYYSVSDFDYNGSGIGVATSEDPTGPFEDKVIRPPTSNNGNSIDPTVFKDDDGKYYLYYGSGDPGAG 139 (271)
T ss_pred CeEEE--ECCEEEEEEEcccCCCCcccEEEEECCCCCCCccccccCcCccCCCCccCcceEEcCCCCEEEEEecccCCCC
Confidence 99998 6799999999875444568899999999999999742 112345678999999999999999999864
Q ss_pred CCcEEEEEcCCCCCCccccEEE----eecCceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEE-EeCCCCCCceeCCCc-
Q 012453 300 NSELHIGPLTSDYLDVSNVVRR----ILVGQHREAPALFKHLGTYYMVTSGCTGWAPNEALVH-AAESIMGPWEDMGNP- 373 (463)
Q Consensus 300 n~~i~ia~Ls~D~~~~~g~~~~----i~~~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~-~S~s~~GPw~~~g~P- 373 (463)
++.|.+++|++|++...++... .......|||.|+|++|+|||+||.+..+...|.+.+ +|++++|||+..+.+
T Consensus 140 ~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~g~yyl~ys~~~~~~~~y~~~~~~s~~~~Gp~~~~~~~~ 219 (271)
T cd08978 140 FGGIYISELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKNGYYYLTYSANGTGDYGYNIGYATSDSIDGPYVKKGGNA 219 (271)
T ss_pred CCcEEEEEECcccccccCCceeeeeeccCCCceEccEEEEECCEEEEEEEeCCCCCCCceEEEEECCCCCCCcCcCCCCc
Confidence 4679999999999887766532 1234579999999999999999997654345677765 899999999998542
Q ss_pred --cccCCcccceeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCeeEEEEEEE
Q 012453 374 --CIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESRYIWLPLIV 427 (463)
Q Consensus 374 --v~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R~v~lPi~~ 427 (463)
+..... ....+.+|+.|++.++ .++|++||.+-......+++.++.||.|
T Consensus 220 ~~~~~~~~---~~~~~~gh~~~~~~~~-g~~~~~yh~~~~~~~~~~r~~~~~~~~~ 271 (271)
T cd08978 220 GLESDSAG---FVGVGLGHGSVVRDKN-GEWYLVYHAYNANSDNPNRKLVINPLVW 271 (271)
T ss_pred ceEeccCC---CccccCCCceEEECCC-CCEEEEEEeecCCCCCCCceEEEEeccC
Confidence 222211 3456777778887763 2678777754433233455568888865
No 18
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=100.00 E-value=5.7e-34 Score=284.15 Aligned_cols=253 Identities=17% Similarity=0.227 Sum_probs=181.2
Q ss_pred CCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceE
Q 012453 149 GGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKV 228 (463)
Q Consensus 149 d~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~v 228 (463)
||+|++++ ++||+++|... +++.+++|+||++|+..+.++......+ .+..+.+|||+|
T Consensus 2 DP~v~~~~--d~yY~~~T~~~----------------~~~~i~~S~dl~~w~~~~~~~~~~~~~~---~~~~~~~WAP~i 60 (288)
T cd08980 2 DPWVIRHD--GYYYFTATTGE----------------DRIELRRSDTLAGLATAESKVVWTPPDS---GPYSGNLWAPEL 60 (288)
T ss_pred CCeEEEEC--CEEEEEEEeCC----------------CcEEEEecCChhHhhcCCcEEEecCCCC---CCccccEECceE
Confidence 78999874 69999998521 4699999999999998764432211111 123467999999
Q ss_pred EEEccCCEEEEEEEEeCC-CCCcceEEEEEeCC---CCCCceeccccC-CCCCCccCceEEEcCCCcEEEEEEecCC---
Q 012453 229 IYNDRTGKYVMWMHIDDC-NYTKAAVGVAISDY---PTGPFDYLYSKR-PHGFDSRDMTIFKDDDGVAYLVYSSEDN--- 300 (463)
Q Consensus 229 i~n~~~GkYymy~s~~~~-~~~~~~IgVA~Sds---P~GPf~~~~~~~-p~g~~siDp~vF~DdDG~~YL~yg~~~n--- 300 (463)
++ .+|+|||||++... ....++|+||+|++ |+|||++.+... ..+..+|||++|+|+ |+.||+|+++.+
T Consensus 61 ~~--~~g~yylyys~~~~~~~~~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~~~~iDp~~~~dd-G~~Yl~~~~~~~~~~ 137 (288)
T cd08980 61 HY--IDGKWYIYFAAGDGGGNANHRMYVLENAGADPPTGPWTFKGRLADPTDRWAIDGTVFEHN-GQLYFVWSGWEGRTN 137 (288)
T ss_pred EE--ECCEEEEEEEccCCCCCcceeEEEEEeCCCCCCCCCceEeeEeccCCCCeeeeeEEEEEC-CEEEEEEEccCCCCC
Confidence 97 78999999998754 23467899999986 899999875432 235678999999974 999999997642
Q ss_pred --CcEEEEEcCCCCCCccccEEEeecC---------ceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEE-EeCC---CCC
Q 012453 301 --SELHIGPLTSDYLDVSNVVRRILVG---------QHREAPALFKHLGTYYMVTSGCTGWAPNEALVH-AAES---IMG 365 (463)
Q Consensus 301 --~~i~ia~Ls~D~~~~~g~~~~i~~~---------~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~-~S~s---~~G 365 (463)
..|.+++|++++. +.++...+... ...|||+|+|++|+|||+||.......+|.+.+ ++++ |+|
T Consensus 138 ~~~~i~~~~l~~~~~-~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~ 216 (288)
T cd08980 138 GNQNLYIAKMSNPWT-LTGPRVLISRPEYDWERQGPGVNEGPAALKRNGKVFLTYSASGSWTPDYCLGLLTADGGADLLD 216 (288)
T ss_pred CCccEEEEECCCCCc-cCCcceEecCCCCCceecCceeeECcEEEEECCEEEEEEECCCCCCCCCEEEEEEEcCCCCCCC
Confidence 5799999998865 34666555432 468999999999999999997654466788765 5653 577
Q ss_pred C--ceeCCCccccCCcccceeccCCCceEEEcc-cCCcccEEEEEeEeCCCCCCCCeeE-EEEEEEcC
Q 012453 366 P--WEDMGNPCIGGNKVFRLTTFFAQSTYVIPL-AGLPGLYIFMADRWNPADLRESRYI-WLPLIVRG 429 (463)
Q Consensus 366 P--w~~~g~Pv~~~~~~~~~~t~~sq~~~V~~~-~G~~~~yi~~~d~w~~~~~~~~R~v-~lPi~~~~ 429 (463)
| |++.++|++..+.. ..-.+.+|++|++. +| +++|++||.+-........|.+ ..||.|++
T Consensus 217 ~~~~~~~~~pil~~~~~--~~~~g~GH~~iv~~~~G-~~~~~~yH~~~~~~~~~~~R~~~i~~v~~~~ 281 (288)
T cd08980 217 PASWTKSPTPVFQSSPE--NGVYGPGHNSFTKSPDG-TEDWIVYHARPYPNGCGGNRHTRAQKVTWDA 281 (288)
T ss_pred hhhCcCCCCCceecCCC--CccCcCCccceEECCCC-CEEEEEEccccCCCCCCCCceEEEEEEEECC
Confidence 7 77777888876431 12334455566654 44 2388888765443323445664 57999975
No 19
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.97 E-value=1.5e-29 Score=253.58 Aligned_cols=260 Identities=18% Similarity=0.155 Sum_probs=182.2
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCC-cc-cccccceeeccCcEEEEEeCC-CCCCEEeceecccCCcccccccCCCCee
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPT-YH-AHKKAAARVDIIGVGCYSSKD-MWTWKNEGIVLAAEETNETHDLYKLNVL 223 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~-~~-~~~~g~~~~~~~gi~v~sS~D-Lv~W~~~g~vL~~~~~~~~~~~~~~~~i 223 (463)
++||.|++++++++||||.|+.+... .. .+| .....|.+++|+| |++|+.++.++.. +..| ....+
T Consensus 11 ~~DP~i~~~~~~~~~~~~yT~~~~~~~~~~~~w-----~~~~~i~~a~S~D~l~~W~~~g~~~~~-~~~~-----~~~~~ 79 (294)
T cd08984 11 AADPTIIYNRETKEWWMFYTNRRANVPTPGVAW-----VHGTDIGVASSKDGGATWTYRGTADGL-EFEC-----GRNTF 79 (294)
T ss_pred CCCCEEEEeCCCCEEEEEEccccCcCCCCCccc-----CcCceEEEEEeCCCCCCCEEeeeeccC-CCCC-----cccce
Confidence 36899999988899999999754211 10 122 2345799999999 9999999987654 2222 24568
Q ss_pred eeceEEEEccCCEEEEEEEEeCCC----CCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEecC
Q 012453 224 ERPKVIYNDRTGKYVMWMHIDDCN----YTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSED 299 (463)
Q Consensus 224 WAP~vi~n~~~GkYymy~s~~~~~----~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~ 299 (463)
|||+|++ .+|+|||||++.... ....+|++|+|++. ++|+..+.....+...|||+||+++||++||+|++..
T Consensus 80 WAP~v~~--~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-~~w~~~~~~~~~~~~~iD~~vf~~~dg~~yl~y~~~~ 156 (294)
T cd08984 80 WAPEVVW--HGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-WDWTFVGRVDLDSDRVIDACVFKLPDGRWRMWYKDER 156 (294)
T ss_pred eCceEEE--ECCEEEEEEEecCCCCcccCCCcEEEEEECCCc-CcceECCccccCCCCcEEeEEEEeCCCEEEEEEECCC
Confidence 9999998 789999999986432 23578999999995 7899876432234568999999988899999998654
Q ss_pred CCcEEEEEcCCCCCCccccEEEeecCceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEEEeCCCCCCceeCCCccccCCc
Q 012453 300 NSELHIGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSGCTGWAPNEALVHAAESIMGPWEDMGNPCIGGNK 379 (463)
Q Consensus 300 n~~i~ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~~g~Pv~~~~~ 379 (463)
++......+++|+..++.....+ .....|||.|||++|+|||+++... ...+++|+++. +|++.+.++.....
T Consensus 157 ~~~~~~~a~s~D~~~w~~~~~~i-~~~~~EgP~v~k~~g~yym~~~~~~-----g~~~~~S~D~~-~W~~~~~~l~~~~~ 229 (294)
T cd08984 157 RGSTTYAADSEDLYHWTVEGPVL-GDRPHEGPNVFRWKGYYWMIIDEWK-----GLGVYRSKDAE-NWERQGGILLKPGT 229 (294)
T ss_pred CCeEEEEEECCCCCEEEeCCccc-cCCCCCCCCeeEECCEEEEEEcCCc-----eEEEEECCChh-hcEECCeeeccCCC
Confidence 33333456788888876533222 2346799999999999999986421 23456899999 99999877764311
Q ss_pred ccceeccCCCceEEEcccCCcccEEEEEeEeCCCCC----------CCCeeEE-EEEEEcCCCCC
Q 012453 380 VFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADL----------RESRYIW-LPLIVRGPADR 433 (463)
Q Consensus 380 ~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~----------~~~R~v~-lPi~~~~~~~~ 433 (463)
.. ......+|..|++.+| ++||+||.+-.++.. ..+|+|+ ..|.+ + |+
T Consensus 230 ~~-~~~~~~~H~~i~~~~~--~~y~~Yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~--dg 288 (294)
T cd08984 230 RP-DDGAKGRHADVVVTGD--RAYIFYFTHPGREYEAEDDAADPYRYRRSSIQVAELEV-V--DG 288 (294)
T ss_pred Cc-cccccccCCcEEEeCC--EEEEEEEecCCCcccccccccCchhheeeeEEEEEEEE-e--CC
Confidence 00 1122336667887766 799999987665321 2234666 55777 3 66
No 20
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=99.97 E-value=3.5e-29 Score=245.70 Aligned_cols=237 Identities=21% Similarity=0.268 Sum_probs=166.2
Q ss_pred eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceeccc--CCcccccccCCCCeeee
Q 012453 148 HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAA--EETNETHDLYKLNVLER 225 (463)
Q Consensus 148 hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~--~~~~~~~~~~~~~~iWA 225 (463)
+||+|++. +|+||||+|..... ...+|.+++|+||++|+.++.++.. .+.. ......+||
T Consensus 1 ~DP~i~~~--~g~yyl~~~~~~~~------------~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~----~~~~~~~wa 62 (286)
T cd08772 1 ADPNLIKY--NGTYYIFFSGDDKN------------GNPGIAHATSKDLVNWTDHPVALVWWARRGG----PKDSGGIWA 62 (286)
T ss_pred CCCeEEEE--CCEEEEEEEccCCC------------CCceEEEEECCCcCcceECCccchhhcccCC----CCCCCcEec
Confidence 47888876 49999999964310 2457999999999999999988751 1111 113567999
Q ss_pred ceEEEEccC-CEEEEEEEEeCCCCCcceEEEEEeCCCCCCceecccc--------CCCCCCccCceEEEcCCCcEEEEEE
Q 012453 226 PKVIYNDRT-GKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSK--------RPHGFDSRDMTIFKDDDGVAYLVYS 296 (463)
Q Consensus 226 P~vi~n~~~-GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~--------~p~g~~siDp~vF~DdDG~~YL~yg 296 (463)
|+|++ .+ |+|||||++.......++|++|+|+++.+||+..... .......|||+||+|+||++||+|+
T Consensus 63 p~v~~--~~~g~~~l~yt~~~~~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~~y~~~~ 140 (286)
T cd08772 63 PSIVY--IENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGKWYLVFG 140 (286)
T ss_pred ceEEE--cCCCCEEEEEEeecCCCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCCEEEEEc
Confidence 99998 45 9999999987543356899999999999999965321 1123568999999998899999999
Q ss_pred ecC---CCcEEEEEcCCCCCCccccEE-Ee---ecCceeeeeEEEEECCEEEEEEeCCCCC--CCCcEEEE-EeCCCCCC
Q 012453 297 SED---NSELHIGPLTSDYLDVSNVVR-RI---LVGQHREAPALFKHLGTYYMVTSGCTGW--APNEALVH-AAESIMGP 366 (463)
Q Consensus 297 ~~~---n~~i~ia~Ls~D~~~~~g~~~-~i---~~~~~~EgP~vfK~~G~YYL~yS~~tg~--~~n~~v~~-~S~s~~GP 366 (463)
+.. .+.|.++++++++........ .+ ......|||.|||++|+|||+||...+. ...|.+++ +|++++||
T Consensus 141 ~~~~~~~~~i~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~g~~yL~~s~~~~~~~~~~y~~~~~~~~~~~g~ 220 (286)
T cd08772 141 SGDHHNFGGIFLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKNGKYYLFYSINGTGRVDSTYSIGYARSESDTGP 220 (286)
T ss_pred cccCCCCCeEEEEEcCCCCCcccccceeeEeeccCCCceeccEEEEECCEEEEEEEcCCCcCCCCCcceEEEEccCCCCC
Confidence 763 457999999887654333322 11 1245899999999999999999965432 34566665 79999999
Q ss_pred ceeCC-Cc----cccCCcccceeccCCCceEEEcccCCcccEEEEEeE
Q 012453 367 WEDMG-NP----CIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADR 409 (463)
Q Consensus 367 w~~~g-~P----v~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~ 409 (463)
|+... ++ +.... ....+..|+.++..++ .++|+++|-+
T Consensus 221 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-g~~~~~~~~~ 263 (286)
T cd08772 221 YVPKSDTSGGLSLTGGN----DGGVGPYHAAAFNDAG-GRVVLVYHAY 263 (286)
T ss_pred cccCCCCCCcccccccc----CCCCCCCccEEEECCC-CCEEEEEEec
Confidence 99873 32 11111 1223334444544332 2677777743
No 21
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.5e-27 Score=247.92 Aligned_cols=214 Identities=22% Similarity=0.309 Sum_probs=162.1
Q ss_pred CeEEe---eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCccccccc-C
Q 012453 143 APIQA---HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDL-Y 218 (463)
Q Consensus 143 npi~a---hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~-~ 218 (463)
|||.+ .||+|+++ ++.||+-.+. +..++|+.++.|+||+||+.....|.....-..... .
T Consensus 23 NPvl~gf~PDpSi~rv--g~dyYia~st--------------F~~fpGl~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~ 86 (549)
T COG3507 23 NPVLAGFNPDPSIVRV--GDDYYIATST--------------FEWFPGLAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFP 86 (549)
T ss_pred CccccccCCCCceEec--CCceEEEcce--------------EEEcCceeeeccccccCcEEecccccCcchhhhhcccC
Confidence 55554 58899986 5788887542 346889999999999999999987776543222222 3
Q ss_pred CCCeeeeceEEEEccCCEEEEEEE-Ee--CCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEE
Q 012453 219 KLNVLERPKVIYNDRTGKYVMWMH-ID--DCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVY 295 (463)
Q Consensus 219 ~~~~iWAP~vi~n~~~GkYymy~s-~~--~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~y 295 (463)
.++.+|||+|.+ ++|||||||+ +. +..+......+.++++++|||++.... .+.+.|||++|.|+||+.||++
T Consensus 87 ~S~giWAPdl~y--~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~G~WsDpi~l--~~~~~iDPslf~D~dGr~wlv~ 162 (549)
T COG3507 87 YSGGIWAPDLSY--HDGKFWLYYTDVKRSGGPYKNAGNYLVTAESIDGPWSDPIKL--NGSNAIDPSLFFDKDGRKWLVN 162 (549)
T ss_pred CCCceeccceec--CCCcEEEEEecccccCCcccccccEEEEecCCCCCcccceec--CCcCccCCceeecCCCCEEEEe
Confidence 578899999998 9999999994 22 223455677888999999999986532 3346899999999999999999
Q ss_pred EecCCC-------cEEEEEcCCCCCCcccc-EEEeecC---ceeeeeEEEEECCEEEEEEeCCCCCCCCcE-EEEEeCCC
Q 012453 296 SSEDNS-------ELHIGPLTSDYLDVSNV-VRRILVG---QHREAPALFKHLGTYYMVTSGCTGWAPNEA-LVHAAESI 363 (463)
Q Consensus 296 g~~~n~-------~i~ia~Ls~D~~~~~g~-~~~i~~~---~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~-v~~~S~s~ 363 (463)
+++..+ .|.+++.++-...+.|. ...++.+ ...|||.++|++|+|||+.+.+.+-.-.+. +++||+||
T Consensus 163 ~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~~~~~~G~~~~~~EGPhl~k~~gYYYL~~a~gG~t~~gh~~~vaRSKsi 242 (549)
T COG3507 163 GSWDGGIFMHSFAGIILQEYDKTTQKLVGQGYKIIFDGGNGGLTEGPHLYKKTGYYYLYVAEGGLTTYGHAIRVARSKSI 242 (549)
T ss_pred cccCCCcccccccceeeeeccccccccCCccceeEeccCCCccccCceeeccCCEEEEEEEcCCCCccceeEEEEeccCC
Confidence 998654 57777777766677777 4455443 479999999999999999985432122244 44699999
Q ss_pred CCCceeC-CCcccc
Q 012453 364 MGPWEDM-GNPCIG 376 (463)
Q Consensus 364 ~GPw~~~-g~Pv~~ 376 (463)
.|||+.. ++|++.
T Consensus 243 dGPYe~~~~~pllt 256 (549)
T COG3507 243 DGPYEDHPGNPLLT 256 (549)
T ss_pred CCCcccCCCCeeee
Confidence 9999988 889985
No 22
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.95 E-value=9.5e-26 Score=224.49 Aligned_cols=218 Identities=14% Similarity=0.180 Sum_probs=153.1
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeec
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP 226 (463)
.+||.|++.+++|+||+++|+..... +.....+|.+|+|+||++|+..+.++...+ ..+.+|||
T Consensus 18 ~rDP~I~r~~~~g~yy~~~T~~~~~~--------~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--------~~~~~WAP 81 (276)
T cd08983 18 LRDPFILRSHEGGKYYMIATDLKITG--------QTNGSQYIVVWESTDLVNWTFQRLVKVNPP--------NAGNTWAP 81 (276)
T ss_pred ccCCeEEEcCCCCEEEEEEEecCcCC--------cccCCCeEEEEECCcccCCcccceeecCCC--------CcCcEeCc
Confidence 36899999866899999999864211 012346899999999999999998763211 23568999
Q ss_pred eEEEEccCCEEEEEEEEeCCC----CCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEecCCCc
Q 012453 227 KVIYNDRTGKYVMWMHIDDCN----YTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDNSE 302 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~----~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~n~~ 302 (463)
+|+|++.+|+|+|||++.... ....+|+++++.++ ..|+........+...||+++|+|+ |++||+|+++.+..
T Consensus 82 ev~~d~~~g~y~~~~s~~~~~~~~~~~~~~i~~~tt~Df-~tft~p~~~~~~~~~~ID~~v~~~~-g~~Yl~~k~~~~~~ 159 (276)
T cd08983 82 EAFWDAERGQYVVYWSSRLYDNTGGFYNYRLYATTTSDF-VTFTEPKVWIDLGANVIDTTVVKVG-GTYYRFYKNEGSKD 159 (276)
T ss_pred cceEcCCCCeEEEEEecccCCCCCCCccEEEEEEecCcc-cccCCCeEeecCCCCeEeeEEEEeC-CEEEEEEecCCCCc
Confidence 999988899999999987542 34567777777444 4677654433356789999999975 99999999876667
Q ss_pred EEEEEcCCCCCCccccEEEee-----cCceeeeeEEEEECC--EEEEEEeCCCCCCCCcEEEEEeCCC-CCCceeCCCcc
Q 012453 303 LHIGPLTSDYLDVSNVVRRIL-----VGQHREAPALFKHLG--TYYMVTSGCTGWAPNEALVHAAESI-MGPWEDMGNPC 374 (463)
Q Consensus 303 i~ia~Ls~D~~~~~g~~~~i~-----~~~~~EgP~vfK~~G--~YYL~yS~~tg~~~n~~v~~~S~s~-~GPw~~~g~Pv 374 (463)
|++++++. +.|....+. .+...|||.|||+++ +|||+++.+.+ ..|.. ..++++ .|.|+.....-
T Consensus 160 i~~~~s~~----l~g~~~~~~~~~~~~~~~~EgP~v~k~~~~~~y~L~~d~y~~--~~Y~~-~~t~d~~~~~~~~~~~~~ 232 (276)
T cd08983 160 IELARSKS----LTGPWTIVGTGDAGWGGAVEGPTVFKLNNGGGWYLYGDNYSG--GGYYP-FDTSDLASTSWTKVALYG 232 (276)
T ss_pred EEEEEeCC----CCCCceEecccccCCCCceeCCeEEEECCCCEEEEEEEECCC--CCeEE-EEecCcCCCceecccccC
Confidence 88877543 345443332 235799999999987 99999997652 23333 245555 56677432211
Q ss_pred ccCCcccceeccCCCceEEEcccC
Q 012453 375 IGGNKVFRLTTFFAQSTYVIPLAG 398 (463)
Q Consensus 375 ~~~~~~~~~~t~~sq~~~V~~~~G 398 (463)
......|+.|+++.-
T Consensus 233 ---------~~~~~rHg~v~~it~ 247 (276)
T cd08983 233 ---------LPGNPRHGTVVPITA 247 (276)
T ss_pred ---------CCCCCCcceEecCCH
Confidence 223456778999864
No 23
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=99.93 E-value=2.5e-24 Score=211.54 Aligned_cols=199 Identities=18% Similarity=0.228 Sum_probs=147.9
Q ss_pred eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccC-CcccccccCCCCeeeec
Q 012453 148 HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAE-ETNETHDLYKLNVLERP 226 (463)
Q Consensus 148 hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~-~~~~~~~~~~~~~iWAP 226 (463)
-||.|++. +|+||+|||..+... ...+++| |++|+.++.++... .... ....+|||
T Consensus 25 kDPtiv~~--nGkYyvYgT~~~~~~--------------~~s~~~S--f~~Ws~~g~A~q~~l~~~~-----~~~~fwAP 81 (303)
T cd08987 25 KDPTVVYY--NGRYHVYATTADAGN--------------YGSMYFN--FTDWSQAASATQYYLQNGN-----MTGYRVAP 81 (303)
T ss_pred cCCeEEEE--CCEEEEEEccCCCCC--------------ceeeeec--ccCHhHhccchhhcccCCC-----CCcccccC
Confidence 57788875 599999999754211 2468888 99999999776311 0000 13458999
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccC-------CCCCCccCceEEEcCCCcEEEEEEecC
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKR-------PHGFDSRDMTIFKDDDGVAYLVYSSED 299 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~-------p~g~~siDp~vF~DdDG~~YL~yg~~~ 299 (463)
+|+|-+.+++|||+|... .+.++||++|+||+....... ..+...||+.| ++|||+.|||+.+.
T Consensus 82 qVfyf~pk~kwYL~Yq~~-------~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLff~~d- 152 (303)
T cd08987 82 QVFYFAPQNKWYLIYQWW-------PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLFFSDD- 152 (303)
T ss_pred EEeeeccCCEEEEEEecC-------ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEEEecC-
Confidence 999877889999999962 267999999999988432210 11235799999 68899999999865
Q ss_pred CCcEEEEEcCCC-CCCccccEEEeec----CceeeeeEEEEECC--EEEEEEeCCCCCCCCcEEEEEeCCCCCCceeC--
Q 012453 300 NSELHIGPLTSD-YLDVSNVVRRILV----GQHREAPALFKHLG--TYYMVTSGCTGWAPNEALVHAAESIMGPWEDM-- 370 (463)
Q Consensus 300 n~~i~ia~Ls~D-~~~~~g~~~~i~~----~~~~EgP~vfK~~G--~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~~-- 370 (463)
|+.|+.++|+.+ .-...++...+.. ...+|||.|+|.+| +|||++++.......|.+.++|+||.|||+++
T Consensus 153 nG~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~G~~~YlmiveA~g~~~~rYfrs~Ts~Sl~GpWt~~a~ 232 (303)
T cd08987 153 NGKLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVKGQNQYLLIVEAIGSDGGRYFRSWTATSLDGPWTPLAT 232 (303)
T ss_pred CCeEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEECCCeEEEEEEEecCCCCCCeEEEEEcCCCCCCceeccc
Confidence 678999999876 5544455444432 46899999999998 99999997543345687788999999999998
Q ss_pred --CCccccCC
Q 012453 371 --GNPCIGGN 378 (463)
Q Consensus 371 --g~Pv~~~~ 378 (463)
.||+.+..
T Consensus 233 ~e~nPfag~~ 242 (303)
T cd08987 233 TESNPFAGAN 242 (303)
T ss_pred ccCCCccccc
Confidence 47888763
No 24
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.87 E-value=2e-20 Score=190.61 Aligned_cols=201 Identities=20% Similarity=0.309 Sum_probs=129.2
Q ss_pred eEEeeCC-ceEEECCCCEEEEEEEecCCCC--c--ccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccC
Q 012453 144 PIQAHGG-GILYDERSRTYFWYGEYKDGPT--Y--HAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLY 218 (463)
Q Consensus 144 pi~ahd~-~I~~~~~~g~YYlygT~~~g~~--~--~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~ 218 (463)
+|...|| +|++. +|+|||+.|...+.+ + ...+....-.....|.+++|+||++|+.++.+|...+.. .+
T Consensus 34 ~i~r~dP~~Vi~~--~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~~g----~W 107 (349)
T cd08992 34 GVHRRDPSSVIKV--DGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGEKG----AY 107 (349)
T ss_pred CeecCCCceEEEE--CCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCCCC----Cc
Confidence 3555667 48875 589999887543100 0 000000000013457789999999999999888654321 12
Q ss_pred CCCeeeeceEEEEccCCEEEEEEEEeCCCC---CcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEE
Q 012453 219 KLNVLERPKVIYNDRTGKYVMWMHIDDCNY---TKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVY 295 (463)
Q Consensus 219 ~~~~iWAP~vi~n~~~GkYymy~s~~~~~~---~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~y 295 (463)
....+|||+|++ .+|+|||||++....+ ...+||||+|++|.|||++... |.-...-|...+.|+||
T Consensus 108 d~~~vwaP~Vi~--~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~--Pil~p~~dg~w~~d~~~------ 177 (349)
T cd08992 108 DDRSVFTPEVLE--HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDE--PILSPSNDGIWKGDEDN------ 177 (349)
T ss_pred cccceECcEEEE--ECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCC--cEecCCcCCceeeccCc------
Confidence 467799999996 8999999998643211 2368999999999999997532 21011123334444343
Q ss_pred EecCCCcEEEEEcCCCCCCccccEEEeecCceeeeeEEEEECCEEEEEEeCCCC-----C-CCCcEEEE-EeCCCCCCce
Q 012453 296 SSEDNSELHIGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSGCTG-----W-APNEALVH-AAESIMGPWE 368 (463)
Q Consensus 296 g~~~n~~i~ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vfK~~G~YYL~yS~~tg-----~-~~n~~v~~-~S~s~~GPw~ 368 (463)
..++++..++.+ ..+|+|.|++++|+|||+|++... + ..++.+++ +|++|+|||+
T Consensus 178 -------~~~~~~~g~wD~-----------~~v~~P~v~~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~ 239 (349)
T cd08992 178 -------RFLVKKKGSFDS-----------HKVHDPCLFPFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYV 239 (349)
T ss_pred -------eeEeccCCCccc-----------CceECCEEEEECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCE
Confidence 223344444332 236999999999999999987531 1 23456665 7999999999
Q ss_pred eC-CCccccCC
Q 012453 369 DM-GNPCIGGN 378 (463)
Q Consensus 369 ~~-g~Pv~~~~ 378 (463)
+. .+||+...
T Consensus 240 r~~~nPi~~~~ 250 (349)
T cd08992 240 KSPYNPITNSG 250 (349)
T ss_pred eCCCCcccCCC
Confidence 87 58988654
No 25
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=99.86 E-value=5.5e-20 Score=182.56 Aligned_cols=202 Identities=18% Similarity=0.184 Sum_probs=139.2
Q ss_pred CCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceE
Q 012453 149 GGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKV 228 (463)
Q Consensus 149 d~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~v 228 (463)
|+..++. +|+||||.+...... .|. .....+.+++|+||+||+.++.+|...+.. .....+|+|++
T Consensus 2 d~~~~~~--~G~yhlfyq~~p~~~---~~~----~~~~~wgha~S~Dlv~W~~~~~al~~~~~~-----~d~~g~~sgs~ 67 (280)
T cd08995 2 DPMPFYD--DGTFHIFYLHDPRNG---PPE----GLRHPWSLLTTKDLVNYEDHGEAIPRGGDE-----DDDDAIGTGSV 67 (280)
T ss_pred CccceEE--CCEEEEEEEcCCCCC---Ccc----cCCceEEEEEccCcCccEECcceecCCCCc-----ccccCceEeEE
Confidence 4556665 489999998754211 110 124568999999999999999988754321 13467999999
Q ss_pred EEEccCCEEEEEEEEeCCC-CCcceEEEEEeCCCCCCceeccc--cC--CCC---CCccCceEEEcC-CCcEEEEEEecC
Q 012453 229 IYNDRTGKYVMWMHIDDCN-YTKAAVGVAISDYPTGPFDYLYS--KR--PHG---FDSRDMTIFKDD-DGVAYLVYSSED 299 (463)
Q Consensus 229 i~n~~~GkYymy~s~~~~~-~~~~~IgVA~SdsP~GPf~~~~~--~~--p~g---~~siDp~vF~Dd-DG~~YL~yg~~~ 299 (463)
+. .+|+|||||++.... ...++|++|+|+++ .+|+.... .. +.+ ...+||.||.|+ +|++||++++..
T Consensus 68 ~~--~~g~~~l~YTg~~~~~~~~~~i~~A~S~D~-~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~ 144 (280)
T cd08995 68 IK--GEGTYHAFYTGHNLDGKPKQVVMHATSDDL-ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRL 144 (280)
T ss_pred Ee--eCCEEEEEEEEECCCCCCcEEEEEEECCCC-CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEecc
Confidence 97 679999999986432 23578999999997 68987532 11 222 347899999986 799999998642
Q ss_pred -----CCcEEEEEc-CCCCCCccccEEEee---cCceeeeeEEEEECCEEEEEEeCCCCCCCCcEE-EEEeCCCCCCcee
Q 012453 300 -----NSELHIGPL-TSDYLDVSNVVRRIL---VGQHREAPALFKHLGTYYMVTSGCTGWAPNEAL-VHAAESIMGPWED 369 (463)
Q Consensus 300 -----n~~i~ia~L-s~D~~~~~g~~~~i~---~~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v-~~~S~s~~GPw~~ 369 (463)
+....|..+ ++|+.+++-.. .+. .+...|+|.||+.+|+|||+||... .++.+ +.+++++.|||+.
T Consensus 145 ~~~~~~~~g~i~~~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~g~~~L~~s~~~---~~~~~~Y~~~~~~~g~~~~ 220 (280)
T cd08995 145 LDGPYNRRGCIALFTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMGDWWYLVYSEFS---ENRKTHYRVSKSPFGPWRA 220 (280)
T ss_pred CCCCCCCCeEEEEEEeCCcCcceecC-ceecCCCcceeecceEEEECCEEEEEEEecc---CCCcEEEEEeCCCCCCeEc
Confidence 122233333 67887764321 111 1346899999999999999999653 23334 4478899999976
Q ss_pred CC
Q 012453 370 MG 371 (463)
Q Consensus 370 ~g 371 (463)
..
T Consensus 221 ~~ 222 (280)
T cd08995 221 PD 222 (280)
T ss_pred CC
Confidence 53
No 26
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.85 E-value=1.6e-19 Score=184.17 Aligned_cols=215 Identities=20% Similarity=0.252 Sum_probs=146.6
Q ss_pred ccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCC-----CCCcceEEEEEe
Q 012453 184 DIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDC-----NYTKAAVGVAIS 258 (463)
Q Consensus 184 ~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~-----~~~~~~IgVA~S 258 (463)
....|.++.|+||++|+..+.+++... .....+|+++++. ..+|+++|||+.... ....++|++|++
T Consensus 39 ~~~~wgh~~S~dlv~W~~~~~l~p~~~-------~d~~g~wSGsa~~-~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~ 110 (349)
T cd08997 39 GDARIGYFYSRAGGNWIDGGKVFPDGL-------SPGSREWSGSATL-DDDGTVQLFYTAVGRKGEPQPTFTQRLALARG 110 (349)
T ss_pred CceEEEEEEeCCCCcccCCCccCCCCc-------ccCCCeEcceEEE-eCCCeEEEEEeccccCCCCCCCceEEEEEEEC
Confidence 455689999999999999887776322 2466899999997 346999999998632 124577888887
Q ss_pred CCC----CCC------ceecccc----------CC--CCCCccCceEEEcC-CCcEEEEEEecCC---------------
Q 012453 259 DYP----TGP------FDYLYSK----------RP--HGFDSRDMTIFKDD-DGVAYLVYSSEDN--------------- 300 (463)
Q Consensus 259 dsP----~GP------f~~~~~~----------~p--~g~~siDp~vF~Dd-DG~~YL~yg~~~n--------------- 300 (463)
+.. .+. |+..+.. .+ .....+||.||+|+ +|+.||++.+...
T Consensus 111 ~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~ 190 (349)
T cd08997 111 TLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGR 190 (349)
T ss_pred CCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCccccccccccc
Confidence 752 121 1111100 01 12468999999997 8999999998521
Q ss_pred ---------------CcEEEEEcCC-CCCCcc--ccEEE-eecCceeeeeEEEEECCEEEEEEe-CCCCCCCC-----cE
Q 012453 301 ---------------SELHIGPLTS-DYLDVS--NVVRR-ILVGQHREAPALFKHLGTYYMVTS-GCTGWAPN-----EA 355 (463)
Q Consensus 301 ---------------~~i~ia~Ls~-D~~~~~--g~~~~-i~~~~~~EgP~vfK~~G~YYL~yS-~~tg~~~n-----~~ 355 (463)
+.|.++++++ |+..++ ++... .......|+|.|||++|+||||+| .++++.++ +.
T Consensus 191 ~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~~~~gk~yL~~s~~~~~~~~~~~~~~~~ 270 (349)
T cd08997 191 VLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVVFHNGKYYLFTISHRSTFAPGLSGPDGL 270 (349)
T ss_pred cccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEEEECCEEEEEEeCCcCccccccCCCCcE
Confidence 3456777643 444322 11110 011346999999999999999999 45556654 56
Q ss_pred EEEEeCCCCCCceeC-CCccccCCcccceeccCCCceEEEcccCCcccEEEEEeEeCC
Q 012453 356 LVHAAESIMGPWEDM-GNPCIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNP 412 (463)
Q Consensus 356 v~~~S~s~~GPw~~~-g~Pv~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~ 412 (463)
.+++|++++|||+.. +.+++-+++. ..++.+|+++|++ . ....-|-|.+..
T Consensus 271 ~g~vsdsl~GP~~~~n~sglvl~~p~--~~~~~~ys~~~~p-~---~lv~Sfid~~~~ 322 (349)
T cd08997 271 YGFVSDSLRGPYKPLNGSGLVLGNPT--DAPFQTYSWYVMP-N---GLVTSFIDNVGF 322 (349)
T ss_pred EEEEeCCCCCCCccCCCCcceeCCCC--CCccccceEEEEC-C---CEEEEEecccCC
Confidence 677999999999997 5666555543 4689999999998 2 344445566554
No 27
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=99.84 E-value=1.2e-18 Score=163.12 Aligned_cols=271 Identities=16% Similarity=0.218 Sum_probs=180.8
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEec--eecccCCcccccccCCCCeee
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEG--IVLAAEETNETHDLYKLNVLE 224 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g--~vL~~~~~~~~~~~~~~~~iW 224 (463)
..||-|.+. .+|.||..++-. .| ..|.+...+-|..-.... +|....+... -++.+|
T Consensus 13 radp~iykh-~dg~yyftasvp---ey------------drie~rraktleglr~aepvvvwrk~esgp-----ms~liw 71 (324)
T COG3940 13 RADPMIYKH-NDGYYYFTASVP---EY------------DRIEVRRAKTLEGLRNAEPVVVWRKHESGP-----MSNLIW 71 (324)
T ss_pred ccCceEEEc-cCccEEEEeccC---cc------------ceeeeeeccchhhhhccCceeEEeccCCCc-----hhhccc
Confidence 357777764 457777776532 11 235555555443332211 2222221111 256799
Q ss_pred eceEEEEccCCEEEEEEEEeCC-----CCCcceEEEEEeCC--C-CCCceecccc-CCCCCCccCceEEEcCCCcEEEEE
Q 012453 225 RPKVIYNDRTGKYVMWMHIDDC-----NYTKAAVGVAISDY--P-TGPFDYLYSK-RPHGFDSRDMTIFKDDDGVAYLVY 295 (463)
Q Consensus 225 AP~vi~n~~~GkYymy~s~~~~-----~~~~~~IgVA~Sds--P-~GPf~~~~~~-~p~g~~siDp~vF~DdDG~~YL~y 295 (463)
||++++ .+|++|+||++... +...+++.|....+ | +|.|+..+.. .+....++|.+.|. ..|+.|++|
T Consensus 72 apeih~--ingkwyiyfaaa~ta~~k~g~f~hrmfvlene~anpltg~w~ekgqikt~wesfsldattfe-h~gk~yyvw 148 (324)
T COG3940 72 APEIHF--INGKWYIYFAAAPTANIKDGTFNHRMFVLENENANPLTGNWVEKGQIKTAWESFSLDATTFE-HNGKLYYVW 148 (324)
T ss_pred ccceeE--EcceEEEEEeecCcccccccccceeEEEEecCCCCCCcccceecceeccchhcceeeeeeee-eCCEEEEEE
Confidence 999998 99999999997643 12356777776543 3 6888877653 34456789999996 689999999
Q ss_pred Eec-----CCCcEEEEEcCCCCCCccccEEEeecC---------ceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEE-E-
Q 012453 296 SSE-----DNSELHIGPLTSDYLDVSNVVRRILVG---------QHREAPALFKHLGTYYMVTSGCTGWAPNEALVH-A- 359 (463)
Q Consensus 296 g~~-----~n~~i~ia~Ls~D~~~~~g~~~~i~~~---------~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~-~- 359 (463)
... +|++|++++|...++ +.|+++.+..+ -..|||+|+|+||+-++.||.... ..||+++. .
T Consensus 149 aqkdp~i~gnsniyiaemenpwt-ikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysasat-d~nycmgllwa 226 (324)
T COG3940 149 AQKDPNIKGNSNIYIAEMENPWT-IKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSASAT-DVNYCMGLLWA 226 (324)
T ss_pred eccCCCccCCcceEEEeccCCce-ecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEecccc-ccceeeeeeee
Confidence 863 467899999977765 67887766432 258999999999999999997543 56788875 2
Q ss_pred --eCCCCCC--ceeCCCccccCCcccceeccCCCc-eEEEcccCCcccEEEEEeEe-CC--CC--CCCCee-EEEEEEEc
Q 012453 360 --AESIMGP--WEDMGNPCIGGNKVFRLTTFFAQS-TYVIPLAGLPGLYIFMADRW-NP--AD--LRESRY-IWLPLIVR 428 (463)
Q Consensus 360 --S~s~~GP--w~~~g~Pv~~~~~~~~~~t~~sq~-~~V~~~~G~~~~yi~~~d~w-~~--~~--~~~~R~-v~lPi~~~ 428 (463)
-++++.| |++...|++...-. +..||.+| +|.++.+|+.+ .|+||.|- .. ++ ....|. ...-+.|+
T Consensus 227 nen~dlldpaswtksptpvf~ts~e--n~qygpghnsftvtedgkhd-vlvyharnyteiegdplydpnrhtrlk~~~wd 303 (324)
T COG3940 227 NENSDLLDPASWTKSPTPVFKTSME--NHQYGPGHNSFTVTEDGKHD-VLVYHARNYTEIEGDPLYDPNRHTRLKIINWD 303 (324)
T ss_pred cccCCcCCchhcccCCCcceeeehh--ccccCCCCCceEecCCCccc-EEEEeccccccccCCcCcCCCccceeEEEeec
Confidence 4467766 99999999876432 44555554 57778888544 55666443 22 11 255666 44557899
Q ss_pred CCCCCCCccccCCCccceeeEE
Q 012453 429 GPADRPLEYNFGFPLWSRVSIY 450 (463)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~ 450 (463)
+ |+ +++||.|+=..+.|.
T Consensus 304 e--dg--~pdfgvp~~dt~~~e 321 (324)
T COG3940 304 E--DG--TPDFGVPEVDTLEIE 321 (324)
T ss_pred c--CC--CCCCCCCCCceeeeE
Confidence 8 77 999999986666653
No 28
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.83 E-value=1.1e-18 Score=174.20 Aligned_cols=213 Identities=15% Similarity=0.211 Sum_probs=141.8
Q ss_pred eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCC-CCEEeceecccCCcccccccCCCCeeee
Q 012453 147 AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMW-TWKNEGIVLAAEETNETHDLYKLNVLER 225 (463)
Q Consensus 147 ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv-~W~~~g~vL~~~~~~~~~~~~~~~~iWA 225 (463)
..++.|++++ +|+||||.|......-..+| .....|.+..|+|+. +|+..+.||...... .+....+|+
T Consensus 13 ~w~~~vi~~~-~g~y~lfy~~~~~~~~~~~~-----~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~----~wd~~~~~~ 82 (291)
T cd08994 13 VWGGSIIKGP-DGKYHLFASRWPEGLGFHGW-----LPYSEIVHAVSDTPEGPYTFQEVVLPGRGGG----YWDARTTHN 82 (291)
T ss_pred EEecceEECC-CCcEEEEEEEccCCCCCCcc-----cccceEEEEEcCCCCCCcEEeeeEcCCCCCC----cccCCCccC
Confidence 4688999875 48999999863211001111 112358899999975 899999999765321 124567999
Q ss_pred ceEEEEccCCEEEEEEEEeCC------CCCcceEEEEEeCCCCCCceecc-cc-CC--CC---CCccCceEEEcCCCcEE
Q 012453 226 PKVIYNDRTGKYVMWMHIDDC------NYTKAAVGVAISDYPTGPFDYLY-SK-RP--HG---FDSRDMTIFKDDDGVAY 292 (463)
Q Consensus 226 P~vi~n~~~GkYymy~s~~~~------~~~~~~IgVA~SdsP~GPf~~~~-~~-~p--~g---~~siDp~vF~DdDG~~Y 292 (463)
|+|++ .+|+|||||+.... ....++||+|+|++|.|||+... .. .+ .+ ...+||+|++++||++|
T Consensus 83 P~vi~--~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~~ 160 (291)
T cd08994 83 PTIKR--FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSYL 160 (291)
T ss_pred CeEEE--ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCEE
Confidence 99997 67999999997642 22467999999999999999842 21 11 11 34689999998799999
Q ss_pred EEEEecC------CCcEEEEEcCCCC-CCccccEE-Ee---ecCceeeeeEEEEECCEEEEEEeCCCCC--CCCcEEE-E
Q 012453 293 LVYSSED------NSELHIGPLTSDY-LDVSNVVR-RI---LVGQHREAPALFKHLGTYYMVTSGCTGW--APNEALV-H 358 (463)
Q Consensus 293 L~yg~~~------n~~i~ia~Ls~D~-~~~~g~~~-~i---~~~~~~EgP~vfK~~G~YYL~yS~~tg~--~~n~~v~-~ 358 (463)
|+|.+.. ...+.++.. +|. ..++-... .+ .....+|.|.|+|++|+|||+|+...++ ...+.+. +
T Consensus 161 m~y~g~~~~~~~~~~~~gla~s-~d~~g~~~~~~~~~v~~~~~~~~~~dP~V~~~~g~yym~~~~~~~~~~~~~~~i~~a 239 (291)
T cd08994 161 LVYKGGTYNPTKGNRKYGVAIA-DSPTGPYTKVSGPPFIEPGDNGNTEDPFVWYDKGQFHMIVKDMLGYVTGEKGGGAYF 239 (291)
T ss_pred EEEeccccCCCCCcEEEEEEEe-CCCCCCCEECCCCccccCCCCCceeCceEEEeCCEEEEEEeecccCcCCCCceEEEE
Confidence 9998752 122344443 333 22221100 11 1235799999999999999999876544 1234444 4
Q ss_pred EeCCCCCCceeCCCc
Q 012453 359 AAESIMGPWEDMGNP 373 (463)
Q Consensus 359 ~S~s~~GPw~~~g~P 373 (463)
+|++.. .|+..+.+
T Consensus 240 ~S~Dg~-~W~~~~~~ 253 (291)
T cd08994 240 RSKDGI-HWKLAPGL 253 (291)
T ss_pred ECCCCC-CceecCcc
Confidence 676644 79988654
No 29
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.72 E-value=6.9e-16 Score=151.40 Aligned_cols=193 Identities=17% Similarity=0.203 Sum_probs=130.1
Q ss_pred CEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEEEccC-CEE
Q 012453 159 RTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRT-GKY 237 (463)
Q Consensus 159 g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~-GkY 237 (463)
|+|+||.+...... .+ .....+.+++|+||++|+..+.++...+.. ......+|+|+|++ .+ |+|
T Consensus 14 g~yhlfy~~~~~~~---~~-----~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~----~~~~~~~~~p~v~~--~~dg~~ 79 (276)
T cd08979 14 GKYHLFYLAAPRGG---GD-----GNTSRIGAASSDDGTWWTRPPAPLPPGPPG----SFDDGGVWTPSVVR--DPDGTY 79 (276)
T ss_pred eeEEEEEEccCcCc---CC-----CCcceeEEEEcCCCCccEECCcCccCCCCC----chhcCCeEcceEEE--cCCCeE
Confidence 78999987643211 00 113457899999999999999877222111 12456799999997 45 999
Q ss_pred EEEEEEeCC-CCCcceEEEEEeCCCCCCceeccccC------------CCCCCccCceEEEcCC-CcEEEEEEecC---C
Q 012453 238 VMWMHIDDC-NYTKAAVGVAISDYPTGPFDYLYSKR------------PHGFDSRDMTIFKDDD-GVAYLVYSSED---N 300 (463)
Q Consensus 238 ymy~s~~~~-~~~~~~IgVA~SdsP~GPf~~~~~~~------------p~g~~siDp~vF~DdD-G~~YL~yg~~~---n 300 (463)
+|||++... ....++|++|+|++... |+...... ......+||.||.+++ |++||+|++.. .
T Consensus 80 ~~~Yt~~~~~~~~~~~i~~A~S~D~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~ 158 (276)
T cd08979 80 RMFYTGYDRPKGAVQRIGLATSKDLIH-WTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADER 158 (276)
T ss_pred EEEEecccCCCCCcceEEEEECCCCCc-eEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCC
Confidence 999997642 22467899999999765 66543221 1224679999999876 89999999753 3
Q ss_pred CcEEEEEcCCCCCCccccEEE--ee---cCceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEEEeCCCCCCcee
Q 012453 301 SELHIGPLTSDYLDVSNVVRR--IL---VGQHREAPALFKHLGTYYMVTSGCTGWAPNEALVHAAESIMGPWED 369 (463)
Q Consensus 301 ~~i~ia~Ls~D~~~~~g~~~~--i~---~~~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~ 369 (463)
+.|.+++ ++|+.+++..... .. .....|+|.+++.+|+|||+|+... ......+..+..+.++++.
T Consensus 159 ~~i~~a~-S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~g~~~l~~~~~~--~~~~~~y~vg~~~~~~~~~ 229 (276)
T cd08979 159 GAIGLAT-SPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKIDGRWYLLYSGRN--EDAKTGYRVGTALFGPGRP 229 (276)
T ss_pred cEEEEEE-CCCCCcceECCCCCCCCCcccCCcCccceEEEECCEEEEEEEecC--ccCCccEEEEecccCCccc
Confidence 5566665 6787776432211 11 2357899999999999999999643 1222334456666677754
No 30
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=99.68 E-value=5.7e-15 Score=147.83 Aligned_cols=177 Identities=19% Similarity=0.222 Sum_probs=126.5
Q ss_pred CceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEE
Q 012453 150 GGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVI 229 (463)
Q Consensus 150 ~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi 229 (463)
.++++. +|+||||.+..... ..| ....+.+++|+||+||+.++.+|.+.. . .....+|+++++
T Consensus 7 ng~~~~--~G~yhlfyq~~p~~---~~~------~~~~wgha~S~Dlv~W~~~~~al~p~~-~-----~d~~g~~sGsav 69 (298)
T cd08996 7 NGLVYF--NGKYHLFYQYNPFG---PVW------GNMHWGHATSKDLVHWEHLPVALAPDD-P-----YDSGGCFSGSAV 69 (298)
T ss_pred CeeeEE--CCEEEEEEcCCCCC---CCC------CCcEEEEEEecCccceeECCcccCCCC-c-----ccCCeEEeCeEE
Confidence 356665 48999998864321 111 234688899999999999999887521 1 235679999999
Q ss_pred EEccC-CEEEEEEEEeCCC--CCcceEEEEEeCCCCCCceeccccC----C--CCCCccCceEEEcCCCcEEEEEEecC-
Q 012453 230 YNDRT-GKYVMWMHIDDCN--YTKAAVGVAISDYPTGPFDYLYSKR----P--HGFDSRDMTIFKDDDGVAYLVYSSED- 299 (463)
Q Consensus 230 ~n~~~-GkYymy~s~~~~~--~~~~~IgVA~SdsP~GPf~~~~~~~----p--~g~~siDp~vF~DdDG~~YL~yg~~~- 299 (463)
. .+ |+|+|||++.... ...+.+++|+|++...+|+...... + .....+||.||.++ |++||++++..
T Consensus 70 ~--~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~~-g~~~m~~g~~~~ 146 (298)
T cd08996 70 V--DDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWHD-GKWYMVLGAGTE 146 (298)
T ss_pred E--cCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeEC-CEEEEEEEEEec
Confidence 7 45 9999999986431 2467899999987678898764321 1 12467999999975 89999999853
Q ss_pred --CCcEEEEEcCCCCCCccccEEE----eecCceeeeeEEEEEC--CEEEEEEeCC
Q 012453 300 --NSELHIGPLTSDYLDVSNVVRR----ILVGQHREAPALFKHL--GTYYMVTSGC 347 (463)
Q Consensus 300 --n~~i~ia~Ls~D~~~~~g~~~~----i~~~~~~EgP~vfK~~--G~YYL~yS~~ 347 (463)
.+.+.+.+ ++|+..++-.... -..+...|+|.+|+.+ |+|||++|..
T Consensus 147 ~~~~~i~ly~-S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~~k~vL~~s~~ 201 (298)
T cd08996 147 DGTGRILLYR-SDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVEGKWVLIFSPQ 201 (298)
T ss_pred CCCcEEEEEE-CCCCCCCEEcceecccCCCccceEeCCcEEEECCCCeEEEEECCC
Confidence 24565655 7888877532211 1123578999999999 9999999864
No 31
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.64 E-value=8.2e-15 Score=145.29 Aligned_cols=206 Identities=20% Similarity=0.139 Sum_probs=134.1
Q ss_pred eeCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCC-ccCCCceeee
Q 012453 54 ISHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMK-DNGNDSFYYY 132 (463)
Q Consensus 54 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a-~~~~~~~~i~ 132 (463)
..+...|+||++||.++.+|+.. ..|.|.. +..|||.|... +..+++.|+ +.+... ....-+..-.
T Consensus 32 ~~~v~~S~Dl~~W~~~g~~l~~~---~~~~~~~--~~~wAP~i~~~---~g~yy~yy~-----~~~~~~~~~igva~s~~ 98 (274)
T cd08990 32 DYHVFSSPDLVNWTDHGVILSVT---DFPAWAK--GQAWAPDVVEK---NGKYYLYFP-----ARDKDGGFAIGVAVSDS 98 (274)
T ss_pred eEEEEECCCCCCcEECcccccCC---CCCcccc--CCcCcCeEEEE---CCEEEEEEE-----eecCCCceEEEEEEeCC
Confidence 36677899999999999999864 2245664 47899998887 556555554 221100 0000011112
Q ss_pred cCceeeCCCCCe--------EEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEece
Q 012453 133 PGRIWLDTEGAP--------IQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGI 204 (463)
Q Consensus 133 pg~~w~dt~Gnp--------i~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~ 204 (463)
|...|.+....+ ..+.|+++++++ +|++|++-... ...+.+-.|+|+.+|+.+..
T Consensus 99 p~Gpw~~~~~~~~~~~~~~~~~~iDp~vf~d~-dG~~yl~~~~~----------------~~~~~~~l~~d~~~~~~~~~ 161 (274)
T cd08990 99 PAGPFKDAGGPILITTPSGGWYSIDPAVFIDD-DGQAYLYWGGG----------------LGLRVAKLKPDMLSLKGEPV 161 (274)
T ss_pred CCCCCCCCCCccccccCCCCCCccCCcEEECC-CCCEEEEECCc----------------CCEEEEEeCccccccCCCcE
Confidence 555676654433 235688888864 57888874321 01133446789999998776
Q ss_pred ecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCC--CCCCccCce
Q 012453 205 VLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRP--HGFDSRDMT 282 (463)
Q Consensus 205 vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p--~g~~siDp~ 282 (463)
++...+ .+. ......+|||.|++ ++|+|||+|++.. ..++++|+|++|.|||+..+.... ......+++
T Consensus 162 ~i~~~~-~~~--~~~~~~~EgP~i~k--~~G~YYl~yS~~~----~~~~~~a~s~~p~GP~~~~g~~~~~~~~~g~gh~~ 232 (274)
T cd08990 162 EIVITD-GAG--DELRRFFEAPWVHK--RNGTYYLSYSTGD----PEEIAYATSDSPLGPFTYRGVILDPPVNGGTNHGS 232 (274)
T ss_pred EEEecc-ccC--CCCCCcccceeEEE--ECCEEEEEEECCC----CcEEEEEEcCCCCCCcccCcEEecCCCCCCCCCCe
Confidence 654321 110 11245689999996 8999999999753 367999999999999997654321 123568888
Q ss_pred EEEcCCCcEEEEEEecC
Q 012453 283 IFKDDDGVAYLVYSSED 299 (463)
Q Consensus 283 vF~DdDG~~YL~yg~~~ 299 (463)
+|.+ +|+.||+|....
T Consensus 233 ~~~~-~g~~y~~yh~~~ 248 (274)
T cd08990 233 IVEF-KGQWYLFYHRAT 248 (274)
T ss_pred EEEE-CCeEEEEEECCc
Confidence 8864 599999998754
No 32
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.63 E-value=1.7e-14 Score=143.33 Aligned_cols=215 Identities=19% Similarity=0.139 Sum_probs=131.8
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeeecC
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYYPG 134 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~pg 134 (463)
+.+..|+||++|+.++.+||+. +.|.. .+..|||.|..+ +-..++.|+..... .. .....-+..-.|.
T Consensus 32 i~~~~S~Dl~~W~~~g~~l~~~-----~~~~~-~~~~waP~v~~~---~g~y~~~y~~~~~~--~~-~~~i~~a~s~~p~ 99 (287)
T cd08999 32 VPIATSTDLVNWTYLGDAFPKL-----PRWWT-GGDFWAPDVSYV---NGKYVLYYSARDKG--SG-GQCIGVATADSPL 99 (287)
T ss_pred EEEEECCCCCCcEECCcccCCC-----CCccc-CCCccCceEEEE---CCEEEEEEEeecCC--CC-CEEEEEEECCCCC
Confidence 5678899999999999888765 34433 468899998887 56655555522110 00 0000000011133
Q ss_pred ceeeCCCCCe-------EEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEE-EeCCCCCCEEeceec
Q 012453 135 RIWLDTEGAP-------IQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCY-SSKDMWTWKNEGIVL 206 (463)
Q Consensus 135 ~~w~dt~Gnp-------i~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~-sS~DLv~W~~~g~vL 206 (463)
..|.+....+ ..+.|++|+.++ +|++||+-...... .+. ...+.+. .|+|+..|+.....+
T Consensus 100 g~~~~~~~~~~~~~~~~~~~~Dp~v~~d~-dG~~Yl~~~~~~~~------~~~----~~~i~~~~ls~d~~~~~~~~~~i 168 (287)
T cd08999 100 GPFTDHGKPPLCCPEGEGGAIDPSFFTDT-DGKRYLVWKSDGNS------IGK----PTPIYLQELSADGLTLTGEPVRL 168 (287)
T ss_pred CCCccCCcceEecCCCCCCccCCCeEECC-CCCEEEEEeccCCC------CCC----CceEEEEEeCCCCccccCCcEee
Confidence 3454321112 224688888864 57777764322110 000 0123332 478999998766543
Q ss_pred ccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCC--cceEEEEEeCCCCCCceecccc--C---CCC--CC
Q 012453 207 AAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYT--KAAVGVAISDYPTGPFDYLYSK--R---PHG--FD 277 (463)
Q Consensus 207 ~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~--~~~IgVA~SdsP~GPf~~~~~~--~---p~g--~~ 277 (463)
......| ....+++|.+++ .+|+|||+|+....... ..+|++|+|++|.|||++.... . +.+ ..
T Consensus 169 ~~~~~~~-----~~~~~EgP~i~k--~~g~yyl~~S~~~~~~~~~~y~i~~~~s~~~~Gpw~~~~~~~~~~~~~~~~~~g 241 (287)
T cd08999 169 LRNDEDW-----EGPLVEAPYLVK--RGGYYYLFYSAGGCCSGASTYAVGVARSKSLLGPYVKAPGPPLLTSSGNGRWVG 241 (287)
T ss_pred ecccccc-----cCCceEeeEEEE--ECCEEEEEEEcCCccCCCCCEEEEEEEeCCCcCCcCCCCCCcceeccCCCeEEc
Confidence 2222222 345799999996 89999999998643222 5789999999999999976421 1 111 23
Q ss_pred ccCceEEEcCCCcEEEEEEecC
Q 012453 278 SRDMTIFKDDDGVAYLVYSSED 299 (463)
Q Consensus 278 siDp~vF~DdDG~~YL~yg~~~ 299 (463)
..++++|+++||+.|++|....
T Consensus 242 ~gh~~~~~~~~g~~~~~yh~~~ 263 (287)
T cd08999 242 PGHNTVVTDDDGRDWLLYHAWD 263 (287)
T ss_pred CCCCeEEECCCCCEEEEEEEEc
Confidence 4688999998999999998753
No 33
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.62 E-value=2.8e-14 Score=142.41 Aligned_cols=182 Identities=21% Similarity=0.206 Sum_probs=117.5
Q ss_pred CCeeeeceEEEEccCCEEEEEEEEeCCCC------CcceEEEEEeCCCCCCceeccccC-CC------CCCccCceEEEc
Q 012453 220 LNVLERPKVIYNDRTGKYVMWMHIDDCNY------TKAAVGVAISDYPTGPFDYLYSKR-PH------GFDSRDMTIFKD 286 (463)
Q Consensus 220 ~~~iWAP~vi~n~~~GkYymy~s~~~~~~------~~~~IgVA~SdsP~GPf~~~~~~~-p~------g~~siDp~vF~D 286 (463)
...+|+|+|+++ .+|+|||||+....+. ..++|++|+|++|.|||+..+... +. .....+|++++.
T Consensus 10 ~~~~w~~~vi~~-~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~P~vi~~ 88 (291)
T cd08994 10 DYSVWGGSIIKG-PDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHNPTIKRF 88 (291)
T ss_pred CeEEEecceEEC-CCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccCCeEEEE
Confidence 467999999983 5689999999754321 246799999999999999765422 21 124689999986
Q ss_pred CCCcEEEEEEecC----------CCcEEEEEcCCCCCCccccEEEeec-------CceeeeeEEEEE-CCEEEEEEeCCC
Q 012453 287 DDGVAYLVYSSED----------NSELHIGPLTSDYLDVSNVVRRILV-------GQHREAPALFKH-LGTYYMVTSGCT 348 (463)
Q Consensus 287 dDG~~YL~yg~~~----------n~~i~ia~Ls~D~~~~~g~~~~i~~-------~~~~EgP~vfK~-~G~YYL~yS~~t 348 (463)
||++||+|.+.. ++.|.++..++....++-....|+. ...++.|.|++. +|+|||+|.+++
T Consensus 89 -~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~~m~y~g~~ 167 (291)
T cd08994 89 -DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSYLLVYKGGT 167 (291)
T ss_pred -CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCEEEEEeccc
Confidence 589999999742 2356666654321122110011221 134789999999 999999998654
Q ss_pred CCC--CCcEE-EEEeCCCCCCceeCCCccccCCcccceeccCCCceEEEcccCCcccEEEEEeE
Q 012453 349 GWA--PNEAL-VHAAESIMGPWEDMGNPCIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADR 409 (463)
Q Consensus 349 g~~--~n~~v-~~~S~s~~GPw~~~g~Pv~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~ 409 (463)
... ....+ .++|+++.|||++.+.+++... ..+....-.+|+..+| .+|++|+.+
T Consensus 168 ~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~----~~~~~~~dP~V~~~~g--~yym~~~~~ 225 (291)
T cd08994 168 YNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEP----GDNGNTEDPFVWYDKG--QFHMIVKDM 225 (291)
T ss_pred cCCCCCcEEEEEEEeCCCCCCCEECCCCccccC----CCCCceeCceEEEeCC--EEEEEEeec
Confidence 211 11223 3579999999999864443211 1123333357887766 688888754
No 34
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.59 E-value=1.6e-13 Score=135.78 Aligned_cols=216 Identities=13% Similarity=0.133 Sum_probs=136.1
Q ss_pred CCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEece--ecccCCcccccccCCCCeeeec
Q 012453 149 GGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGI--VLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 149 d~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~--vL~~~~~~~~~~~~~~~~iWAP 226 (463)
+|++++. +|+||++.+..... ....+.+..|+|++||+..+. +++..+..+ ....+|+|
T Consensus 2 nP~v~~~--~G~y~l~y~~~~~~------------~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~-----~~~gv~dP 62 (268)
T cd08993 2 NPAVVYD--NGEFYLLYRAAGND------------GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGF-----EEGGVEDP 62 (268)
T ss_pred cCeEEEE--CCEEEEEEEEECCC------------CceEEEEEEECCCceEEECCcceEcCCCCCcc-----cccCccCc
Confidence 3567764 58999998753210 123588899999999998653 334212111 34678999
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEc-CCCcEEEEEEec-----CC
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKD-DDGVAYLVYSSE-----DN 300 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~D-dDG~~YL~yg~~-----~n 300 (463)
.|++ .+|+|||+|++........+|++|+|++. ..|+..+.. .....+|+.+|.+ .||++||+|... ..
T Consensus 63 ~v~~--~~g~y~m~Yta~~~~~~~~~i~lA~S~D~-~~W~~~~~~--~~~~~~d~~~~p~~~~g~y~m~~r~~~~~~~~~ 137 (268)
T cd08993 63 RIVK--IDDTYYITYAARPNAPNGTRIGLATTKDF-ITFERLGTS--LVPNNRDGILFPEKINGKYVMLHRPFEYGGTSP 137 (268)
T ss_pred EEEE--ECCEEEEEEEccCCCCCCcEEEEEEeCCc-ceEEEeccc--CCCCCCCEEEeeEEECCEEEEEEccccCCCCCC
Confidence 9997 79999999998653224578999999995 679886532 1234578888864 489999999643 23
Q ss_pred CcEEEEEcCCCCCCccccEEEeec-------CceeeeeEEEEECCEEEEEEeCCC-CCCCCcEEEEEe---CCCCCCcee
Q 012453 301 SELHIGPLTSDYLDVSNVVRRILV-------GQHREAPALFKHLGTYYMVTSGCT-GWAPNEALVHAA---ESIMGPWED 369 (463)
Q Consensus 301 ~~i~ia~Ls~D~~~~~g~~~~i~~-------~~~~EgP~vfK~~G~YYL~yS~~t-g~~~n~~v~~~S---~s~~GPw~~ 369 (463)
..|.+++ ++|+..+......+.. ....+||..++.+..+||+|-+.. .+...|.+++.- ++|...|.+
T Consensus 138 ~~I~lA~-S~Dl~~W~~~~~~~~~~~~~wd~~~ig~g~~pi~~~~g~l~~yhg~~~~~~~~Y~~g~~lld~~dp~~~~~~ 216 (268)
T cd08993 138 PDMWLSF-SPDLVHWGNHRFVLSPRPNHWEQLKIGAGTPPIKTEEGWLVLYHGVDQSCGSVYRLGAALLDLEDPTKVIAR 216 (268)
T ss_pred CcEEEEE-CCCcCccCCCeEEecCCCCceeeceecCCCCCcCcCCCEEEEEeccCCCCCcEEeeeEEEEcccCchHHhcc
Confidence 5788886 7888888654322221 124566777755433677775432 122457666542 244333446
Q ss_pred CCCccccCCcccceeccCCC
Q 012453 370 MGNPCIGGNKVFRLTTFFAQ 389 (463)
Q Consensus 370 ~g~Pv~~~~~~~~~~t~~sq 389 (463)
..+|++.+.......+.+++
T Consensus 217 ~~~p~l~p~~~~e~~G~~~~ 236 (268)
T cd08993 217 SRRPLLEPETDYETGGFIPN 236 (268)
T ss_pred cCCceecCCcccccccccCC
Confidence 67888876543222334443
No 35
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.57 E-value=5.1e-14 Score=139.73 Aligned_cols=208 Identities=13% Similarity=-0.018 Sum_probs=129.0
Q ss_pred eCCccccchhhhhhccccCCCCCCC-------CCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCC
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGK-------RSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGND 127 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~-------~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~ 127 (463)
+++..|+||++||.++.+++.+..- ..+.|. .+..|||.|... +...++.|+.... .....+. .-
T Consensus 38 i~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~--~~~~WAP~v~~~---~g~yyl~~s~~~~--~~~~~~i-~v 109 (269)
T cd08986 38 IPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWY--KNAVWAPELHYI---KGRWYLVACMNNP--GYGGSSI-LL 109 (269)
T ss_pred eEEEeCccccCccccCcccccCCcccccccccccCCcc--cCCcCCceEEEE---CCEEEEEEEccCC--CCCceEE-EE
Confidence 6678999999999999888755100 111232 457899999887 6675656652110 0001110 00
Q ss_pred ceeeecCceeeCCCCC-e-EEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEecee
Q 012453 128 SFYYYPGRIWLDTEGA-P-IQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIV 205 (463)
Q Consensus 128 ~~~i~pg~~w~dt~Gn-p-i~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~v 205 (463)
+..-.|..+|.+..++ + ..+.|+.|..++ +|+.|++-... .+ +-.+.|+.........
T Consensus 110 a~a~~p~Gp~~~~~~~~~~~~~iD~~~f~D~-DG~~Yl~~~~~------------------~i-~~l~~d~~~~~~~~~~ 169 (269)
T cd08986 110 STSGKIEGPYKHITGNKPLFPGIDPSLFEDD-DGKVYLVWHNT------------------LI-ARLKDDLSGLAGDPVR 169 (269)
T ss_pred EeCCCCCCCcEeccCCCCCCCccCCceEEcC-CCCEEEEeeCC------------------ce-EeccCccccccCCcEE
Confidence 0111256677765443 3 245788888875 67888874311 01 2235676655544433
Q ss_pred cccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCC---CCcceEEEEEeCCCCCCceeccccCCCCCCccCce
Q 012453 206 LAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCN---YTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMT 282 (463)
Q Consensus 206 L~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~---~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~ 282 (463)
+..... ..+....+++|.|++ ++|+|||+|++...+ ....+|+||+|++|.|||++.... ....-+.+
T Consensus 170 ~~~~~~----~~~~~~~~EgP~i~k--~~G~YYL~yS~~~~~~~~~~~y~v~va~S~s~~GPy~~~~~~---~~g~Gh~~ 240 (269)
T cd08986 170 IDPSPT----FYKDEIGHEGAFVFK--YGGKYYLFGTAWSTDKGRKGSYDLYYAVADKITGPYGARYFA---GRFLGHNT 240 (269)
T ss_pred Eecccc----cccCCccccccEEEE--ECCEEEEEEeecCCCCCCCCceEEEEEEcCCCCCCccccCcc---ccccCCCc
Confidence 322110 001235689999996 899999999874321 235689999999999999986431 12344677
Q ss_pred EEEcCCCcEEEEEEecC
Q 012453 283 IFKDDDGVAYLVYSSED 299 (463)
Q Consensus 283 vF~DdDG~~YL~yg~~~ 299 (463)
+|+++||+.|+++..+.
T Consensus 241 ~v~~~~G~~~~~~h~~~ 257 (269)
T cd08986 241 PFQDLDGRWWCTAFFNP 257 (269)
T ss_pred eEECCCCCEEEEEEcCC
Confidence 99999999999998764
No 36
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.57 E-value=1.3e-13 Score=136.63 Aligned_cols=198 Identities=18% Similarity=0.144 Sum_probs=128.8
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeeecC
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYYPG 134 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~pg 134 (463)
.++..|+||++||+++.+||+.. +.|.+ ...|||.|... +-.+++.|+-.+. ..-+..-.|.
T Consensus 36 ~~~~~S~Dl~~W~~~g~~l~~~~----~~~~~--~~~wAP~v~~~---~g~yy~yys~~~~---------i~va~s~~p~ 97 (275)
T cd09004 36 FDVFSSKDLVNWTKEGIILDMAD----VSWAN--RAAWAPSVIER---NGKYYFYFSANGG---------IGVAVADSPL 97 (275)
T ss_pred EEEEECCCCCCceECcccccccC----CcccC--CCcCCCeEEEE---CCEEEEEEEcCCc---------EEEEEeCCCC
Confidence 56788999999999999997641 34553 47999998887 6666666662111 0001111245
Q ss_pred ceeeCCCCCeEE--------eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceec
Q 012453 135 RIWLDTEGAPIQ--------AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVL 206 (463)
Q Consensus 135 ~~w~dt~Gnpi~--------ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL 206 (463)
..|.+..++|+. +.|+.|..++ +|++||+-... + ....+-.|.|+.+|+.....+
T Consensus 98 gp~~~~~~~p~~~~~~~~~~~iDp~vf~d~-dG~~yl~~~~~-~---------------~~~i~~l~~d~~~~~~~~~~~ 160 (275)
T cd09004 98 GPFKDALGKPLIDKFTFGAQPIDPDVFIDD-DGQAYLYWGGW-G---------------HCNVAKLNEDMISFDGERDGS 160 (275)
T ss_pred CCCCCCCCCccccCCcCCCCccCCCeEECC-CCCEEEEEcCc-C---------------CEEEEEECCCcccccCcceee
Confidence 556654455543 3578888764 57777763210 0 011223578898888765543
Q ss_pred ccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccC---CCC--CCccCc
Q 012453 207 AAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKR---PHG--FDSRDM 281 (463)
Q Consensus 207 ~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~---p~g--~~siDp 281 (463)
... ....+++|.|++ ++|+|||+|+.........++++|+|++|.|||++..... +.+ ......
T Consensus 161 ~~~---------~~~~~EgP~i~k--~~G~yyl~ys~~~~~~~~Y~~~ya~s~~~~GP~~~~~~~~~~~~~~~~~g~gH~ 229 (275)
T cd09004 161 EIT---------PKNYFEGPFMFK--RNGIYYLMWSEGGWTDPDYHVAYAMADSPLGPFERPGNIILQQDPGIATGPGHH 229 (275)
T ss_pred ecc---------CCCceecceEEE--ECCEEEEEEECCCCCCCCceEEEEEcCCCCCCcccCCcEeeeCCCCCcccCCCC
Confidence 111 134689999996 8999999999764332356899999999999999865211 111 234566
Q ss_pred eEEEcC-CCcEEEEEEec
Q 012453 282 TIFKDD-DGVAYLVYSSE 298 (463)
Q Consensus 282 ~vF~Dd-DG~~YL~yg~~ 298 (463)
++|+++ +|+.|++|...
T Consensus 230 ~~~~~~~~~~~~~~yh~~ 247 (275)
T cd09004 230 SVVNVPGTDEWYIVYHRR 247 (275)
T ss_pred EEEEeCCCCeEEEEEeCC
Confidence 888876 58899999864
No 37
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=99.49 E-value=1.1e-12 Score=128.69 Aligned_cols=215 Identities=18% Similarity=0.175 Sum_probs=133.4
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeeecC
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYYPG 134 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~pg 134 (463)
..|..|+||++||..+.+++... +. +.+.. .+-.|||.|.... +..+++.|+-... ....... .-+..--+.
T Consensus 27 ~~~~~S~Dl~~W~~~~~~~~~~~-~~-~~~~~-~~~~wap~v~~~~--~g~~~l~yt~~~~--~~~~~~i-~~a~s~d~~ 98 (286)
T cd08772 27 IAHATSKDLVNWTDHPVALVWWA-RR-GGPKD-SGGIWAPSIVYIE--NGKFYLYYTDVSF--TKNQQTI-GVATAEDGN 98 (286)
T ss_pred EEEEECCCcCcceECCccchhhc-cc-CCCCC-CCcEecceEEEcC--CCCEEEEEEeecC--CCCceeE-EEEEcCCCC
Confidence 67889999999999999885210 00 12222 4589999888762 2665666661110 0011110 000000022
Q ss_pred ceeeCCCC-----------CeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEec
Q 012453 135 RIWLDTEG-----------APIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEG 203 (463)
Q Consensus 135 ~~w~dt~G-----------npi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g 203 (463)
..|.+... ....+.||.|++++ +|+|||+-..... .....|.+++|+|+.+|+..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~-dG~~y~~~~~~~~------------~~~~~i~~~~s~d~~~w~~~~ 165 (286)
T cd08772 99 GPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDD-DGKWYLVFGSGDH------------HNFGGIFLYESDDDTTWKKGS 165 (286)
T ss_pred CCCccccccccccCCCCccccccccCCeEEEcC-CCCEEEEEccccC------------CCCCeEEEEEcCCCCCccccc
Confidence 23332211 12345799999875 4788887543211 012468899999999999877
Q ss_pred eecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCC--CCcceEEEEEeCCCCCCceecccc---------C
Q 012453 204 IVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCN--YTKAAVGVAISDYPTGPFDYLYSK---------R 272 (463)
Q Consensus 204 ~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~--~~~~~IgVA~SdsP~GPf~~~~~~---------~ 272 (463)
..+.... ......+++|.+++ .+|+|||+|+..... ....++++|+++++.|||++.... .
T Consensus 166 ~~~~~~~------~~~~~~~E~P~~~~--~~g~~yL~~s~~~~~~~~~~y~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 237 (286)
T cd08772 166 AELLISE------GEGGKQIEGPGLLK--KNGKYYLFYSINGTGRVDSTYSIGYARSESDTGPYVPKSDTSGGLSLTGGN 237 (286)
T ss_pred ceeeEee------ccCCCceeccEEEE--ECCEEEEEEEcCCCcCCCCCcceEEEEccCCCCCcccCCCCCCcccccccc
Confidence 5421110 11345789999996 899999999987532 346789999999999999976421 0
Q ss_pred CCCCCccCceEEEcCCCcEEEEEEec
Q 012453 273 PHGFDSRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 273 p~g~~siDp~vF~DdDG~~YL~yg~~ 298 (463)
..+.....+++|+|.+|+.||+|...
T Consensus 238 ~~~~~~~~~~~~~~~~g~~~~~~~~~ 263 (286)
T cd08772 238 DGGVGPYHAAAFNDAGGRVVLVYHAY 263 (286)
T ss_pred CCCCCCCccEEEECCCCCEEEEEEec
Confidence 12235567789999899999999864
No 38
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.48 E-value=2.6e-12 Score=128.35 Aligned_cols=216 Identities=16% Similarity=0.141 Sum_probs=128.5
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCC--CccCCCceeee
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPM--KDNGNDSFYYY 132 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~--a~~~~~~~~i~ 132 (463)
+++..|+||++|+.++.++.++. +.|.. ...|||.|... +...++.|+ +.+.. .....-+..-.
T Consensus 25 i~~~~S~Dl~~W~~~~~~~~~~~----~~~~~--~~~waP~v~~~---~g~yyl~ys-----~~~~~~~~~~i~~a~s~~ 90 (294)
T cd08991 25 FAVYSSPDLVDWKLHGGALLALD----DDWGR--RGFWAPEVYYY---NGKFYMYYS-----ANDRDEKTEHIGVAVSDS 90 (294)
T ss_pred eEEEECCCCCCceECCccccCCC----CCccC--CcEEccEEEEE---CCEEEEEEE-----eccCCCCcceEEEEEeCC
Confidence 45667999999999998887652 23664 58999998876 566555555 22111 00010011112
Q ss_pred cCceeeCCCCCeE----EeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEE-EEEeCCCCCCEEeceec-
Q 012453 133 PGRIWLDTEGAPI----QAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVG-CYSSKDMWTWKNEGIVL- 206 (463)
Q Consensus 133 pg~~w~dt~Gnpi----~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~-v~sS~DLv~W~~~g~vL- 206 (463)
|-.+|.+....++ .+.|+.++.++ +|++||+-+....... ..++. +-.|.|+.+|+......
T Consensus 91 p~gp~~~~~~~~~~~~~~~iD~~vf~d~-dG~~yl~~~~~~~~~~-----------~~~i~~~~l~~d~~~~~~~~~~~~ 158 (294)
T cd08991 91 PLGPFRDIKKPPIDFEPKSIDAHPFIDD-DGKPYLYYSRNNYGNR-----------VSDIYGTELVDDKLSIKTELVGPP 158 (294)
T ss_pred CCCCCCcCCCCcccCCCcccCCceEECC-CCCEEEEEEecCCCCc-----------ccceEEEEEccceeeeccceeecc
Confidence 3345554322222 24588888875 5888887654321100 01233 33577888876432211
Q ss_pred -ccCC-------cccc-cccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceecccc---CCC
Q 012453 207 -AAEE-------TNET-HDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSK---RPH 274 (463)
Q Consensus 207 -~~~~-------~~~~-~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~---~p~ 274 (463)
.... ..|. ........+++|.|++ ++|+|||+|++........++++|+|++|.|||++.... ...
T Consensus 159 ~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k--~~g~yyl~ys~~~~~~~~y~~~~a~s~~~~gp~~~~~~~pl~~~~ 236 (294)
T cd08991 159 IPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLK--HNGRYYLTYSANHYENEDYGVGYATADSPLGPWTKYSNNPILRRN 236 (294)
T ss_pred ccccccccccccccccccccccCceeeCcEEEE--ECCEEEEEEECCCCCCCCceEEEEEcCCCCCCcEecCCCceEeeC
Confidence 1110 0010 0012345799999996 899999999975433234689999999999999985211 001
Q ss_pred ----CCCccCceEEEcCC-CcEEEEEEec
Q 012453 275 ----GFDSRDMTIFKDDD-GVAYLVYSSE 298 (463)
Q Consensus 275 ----g~~siDp~vF~DdD-G~~YL~yg~~ 298 (463)
-......++|+++| |+.||+|.+.
T Consensus 237 ~~~~~~g~gh~~~~~~~~g~~~~~~yh~~ 265 (294)
T cd08991 237 GDKGVEGTGHNSVVKSPDGGELYIVYHAH 265 (294)
T ss_pred CCCceEeCCCCceEECCCCCEEEEEEeee
Confidence 12456778999988 7899999874
No 39
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.47 E-value=3.3e-12 Score=127.39 Aligned_cols=204 Identities=18% Similarity=0.161 Sum_probs=118.1
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhh-----cCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCcc--CCC
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAK-----RRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDN--GND 127 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~--~~~ 127 (463)
.+...|+||++||..+.+|+++ |.|.+ ..+..|||.|.+. +-..++.|+. .+..... ..-
T Consensus 21 ~~v~~S~DL~~W~~~g~~~~~~-----~~~~~~~~~~~~~~~WAP~v~~~---~G~yylyys~-----~~~~~~~~~igv 87 (279)
T cd08988 21 ITILSSKDLVNWTYSGSAFATE-----PTWKKRVPPSFDGHLWAPDIYQH---NGKFYLYYSV-----SAFGSNTSAIGL 87 (279)
T ss_pred EEEEECCCcCCccccCccccCC-----CccccccCCCCCCCEecceEEEE---CCEEEEEEEe-----ccCCCCCceEEE
Confidence 5678899999999999999765 44432 1346899999987 6665555541 1110000 000
Q ss_pred ceeeecCceeeCCC---CCeE---------EeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEE-eC
Q 012453 128 SFYYYPGRIWLDTE---GAPI---------QAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYS-SK 194 (463)
Q Consensus 128 ~~~i~pg~~w~dt~---Gnpi---------~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~s-S~ 194 (463)
+..-.|..+|.+.. ..+| .+.|++++.|+ +|++||+-... + .+|.+.+ +.
T Consensus 88 a~s~~p~Gp~~~~~w~~~~~i~~~~~~~~~~~iDp~~f~Dd-DG~~Yl~~g~~--------~--------~gi~~~eL~~ 150 (279)
T cd08988 88 AVNKTIDGPSPDYGWEKGGVVISSDASDNYNAIDPAIIFDQ-HGQPWLSFGSF--------W--------GGIKLFELDK 150 (279)
T ss_pred EEcCCCCCCCcCcCccccCceEecCCCCCCCccCCceEEcC-CCCEEEEeccc--------C--------CCEEEEEECc
Confidence 01111333322211 0122 24688888875 68888873211 0 1344433 44
Q ss_pred CCCCCEEecee--cccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCC---CCCcceEEEEEeCCCCCCceecc
Q 012453 195 DMWTWKNEGIV--LAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDC---NYTKAAVGVAISDYPTGPFDYLY 269 (463)
Q Consensus 195 DLv~W~~~g~v--L~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~---~~~~~~IgVA~SdsP~GPf~~~~ 269 (463)
|+..-...+.. +.... .....+++|.|++ ++|+|||+++.... .....+++||+|++|.|||++..
T Consensus 151 d~~~~~~~~~~~~i~~~~-------~~~~~~Egp~i~k--~~g~YYl~~S~g~~~~~~~~~y~v~~arS~~~~GPy~~~~ 221 (279)
T cd08988 151 DTMKPAEPGELHSIAGRE-------RSSAAIEAPFILY--RGDYYYLFVSFGLCCRGGDSTYKIAVGRSKNITGPYLDKT 221 (279)
T ss_pred ccCCccCCCcceEEeccC-------CCCCceEeeEEEE--cCCeEEEEEEcCcccCCCCCCeEEEEEEeCCCCCCCCCCC
Confidence 54432111211 11110 0134689999996 89999999987532 12356899999999999999752
Q ss_pred ccCC---CC----------CCccCceEEEcCCCcEEEEEEec
Q 012453 270 SKRP---HG----------FDSRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 270 ~~~p---~g----------~~siDp~vF~DdDG~~YL~yg~~ 298 (463)
.... .+ ......++|+|+ |+.||+|...
T Consensus 222 ~~p~~~~~~~~~~~~~~~~~g~GH~~v~~~~-g~~~~~yH~~ 262 (279)
T cd08988 222 GRSMLQGGGTILDKGNDRWVGPGHNSAYTDD-GKDYLVLHAY 262 (279)
T ss_pred CCCcccCCceEEEcCCCcEEcCCCCEEEeCC-CCEEEEEEEe
Confidence 2110 00 122477889876 8999999864
No 40
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.46 E-value=2.5e-12 Score=130.41 Aligned_cols=208 Identities=15% Similarity=0.103 Sum_probs=125.6
Q ss_pred eeCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccC-CcceEEeeeCCCCccCCCCCccCCCceeee
Q 012453 54 ISHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDE-NSQLRHVFFPDMKTAIDPMKDNGNDSFYYY 132 (463)
Q Consensus 54 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~-~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~ 132 (463)
-.++..|.||++||.++.+++++ ..+.|+. ..|||.|.+.-.+ +...++.|+ +......+ +..-.
T Consensus 47 ~i~v~~S~DL~~W~~~g~v~~~~---~~~~w~~---~~WAP~v~~~~~~~~gkyylyy~-----~~~~~igv---a~Sds 112 (311)
T cd09003 47 DITVISSDDMVNWTDHGEIFVPN---GIAKWAG---NSWAPSIAVKKINGKGKFYLYFA-----NGGGGIGV---LTADS 112 (311)
T ss_pred cEEEEECCCCCCcEEcccccCcC---CCCCccc---ccCCCceEEeccCCCCEEEEEEe-----cCCCeEEE---EEcCC
Confidence 36677899999999999999743 1257763 6799998876111 155444444 11111111 11223
Q ss_pred cCceeeCCCCCeEE------------eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEE-eCCCCCC
Q 012453 133 PGRIWLDTEGAPIQ------------AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYS-SKDMWTW 199 (463)
Q Consensus 133 pg~~w~dt~Gnpi~------------ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~s-S~DLv~W 199 (463)
|..+|.+..|+|+. +.|+.+..|+ +|+.|++-....... .+ .....+.+.+ ++|+..-
T Consensus 113 P~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~Dd-DG~~Yl~~g~~~~~~---~~-----~~~~~i~i~~l~~D~~~~ 183 (311)
T cd09003 113 PVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDD-DGQGYLYFGGGVPGG---RW-----ANPNTARVIKLGDDMISV 183 (311)
T ss_pred CCCCcccCCCCeeecCCCCCccCCccccCCCeEECC-CCCEEEEECCccCCC---cc-----ccCCCEEEEEeCCCceec
Confidence 66778776566553 3588888875 577776643211000 00 0112455555 4477654
Q ss_pred EEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCC-----CCCcceEEEEEeCCCCCCceeccccC--
Q 012453 200 KNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDC-----NYTKAAVGVAISDYPTGPFDYLYSKR-- 272 (463)
Q Consensus 200 ~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~-----~~~~~~IgVA~SdsP~GPf~~~~~~~-- 272 (463)
+.....+. ....++||.|++ ++|+|||+|++... .....++++|+|++|.|||+..+...
T Consensus 184 ~g~~~~i~-----------~~~~~Egp~~~K--~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il~~ 250 (311)
T cd09003 184 DGSAVTID-----------APYFFEASGLHK--INGTYYYSYCTNFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIILKN 250 (311)
T ss_pred cCCceEcc-----------CCCceEeeeEEE--ECCEEEEEEeCCCCccCCCCCCceeEEEEEcCCCCCCcccCCEeccC
Confidence 43222221 124689999996 99999999997532 12467899999999999999754321
Q ss_pred CC---C-CCccCceEEEcCCCcEEEEEEec
Q 012453 273 PH---G-FDSRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 273 p~---g-~~siDp~vF~DdDG~~YL~yg~~ 298 (463)
+. + ......++|.+ +|+.|++|...
T Consensus 251 ~~~~~~~~g~gH~s~~~~-~g~~y~vyH~~ 279 (311)
T cd09003 251 PGAFFGNGGNNHHSIFEF-KGKWYIAYHAR 279 (311)
T ss_pred CccccCCccCCCccEEEe-CCeEEEEEeCC
Confidence 11 1 23446677764 78999999853
No 41
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=99.46 E-value=4.2e-12 Score=126.08 Aligned_cols=204 Identities=12% Similarity=0.043 Sum_probs=124.6
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeeecC
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYYPG 134 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~pg 134 (463)
..|..|+||++||+.+.+|+++ +.+.. .+..|+|-+... +-.+++.||-.... ....... ....-..+
T Consensus 32 wgha~S~Dlv~W~~~~~al~~~-----~~~~d-~~g~~sgs~~~~---~g~~~l~YTg~~~~-~~~~~~i--~~A~S~D~ 99 (280)
T cd08995 32 WSLLTTKDLVNYEDHGEAIPRG-----GDEDD-DDAIGTGSVIKG---EGTYHAFYTGHNLD-GKPKQVV--MHATSDDL 99 (280)
T ss_pred EEEEEccCcCccEECcceecCC-----CCccc-ccCceEeEEEee---CCEEEEEEEEECCC-CCCcEEE--EEEECCCC
Confidence 6789999999999999999875 22222 357889966654 45656666511100 0000000 00000122
Q ss_pred ceeeCCCCCeEE----------eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEece
Q 012453 135 RIWLDTEGAPIQ----------AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGI 204 (463)
Q Consensus 135 ~~w~dt~Gnpi~----------ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~ 204 (463)
..|....++||. ..||.|.+++.+|+|||+-....... .. .....|.+++|+||.+|+..+.
T Consensus 100 ~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~--~~------~~~g~i~~~~S~Dl~~W~~~~~ 171 (280)
T cd08995 100 ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDG--PY------NRRGCIALFTSKDLKNWEYEEP 171 (280)
T ss_pred CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCC--CC------CCCeEEEEEEeCCcCcceecCc
Confidence 334333334433 25899998766799999643321100 00 0113477899999999999876
Q ss_pred ecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEE
Q 012453 205 VLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIF 284 (463)
Q Consensus 205 vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF 284 (463)
++... ....+++|.++. .+|+|||+|+... ....+.+++++++.|||+......-.|....=|..|
T Consensus 172 ~~~~~---------~~~~~E~P~l~~--~~g~~~L~~s~~~---~~~~~~Y~~~~~~~g~~~~~~~~~~dg~dfYA~~~~ 237 (280)
T cd08995 172 FYAPG---------LYFMPECPDLFK--MGDWWYLVYSEFS---ENRKTHYRVSKSPFGPWRAPDDDTFDGRAFYAAKTA 237 (280)
T ss_pred eecCC---------CcceeecceEEE--ECCEEEEEEEecc---CCCcEEEEEeCCCCCCeEcCCcCccCcccccceeEE
Confidence 54321 134689999996 8999999999864 234577888999999997543211125566677888
Q ss_pred EcCCCcEEE
Q 012453 285 KDDDGVAYL 293 (463)
Q Consensus 285 ~DdDG~~YL 293 (463)
.|+ |+..|
T Consensus 238 ~~~-~r~i~ 245 (280)
T cd08995 238 SDG-TRRFL 245 (280)
T ss_pred EeC-CeEEE
Confidence 887 76544
No 42
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.45 E-value=6.5e-12 Score=126.19 Aligned_cols=227 Identities=15% Similarity=0.067 Sum_probs=130.6
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccC--CCceeee
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNG--NDSFYYY 132 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~--~~~~~i~ 132 (463)
+++..|+||++||..+.+++++. ..|.. ...|||.|.+. +-..++.|+ +.+...... .-...-.
T Consensus 38 i~v~~S~DLv~W~~~g~~~~~~~----~~~~~--~~~WAP~v~~~---~G~yyly~s-----~~~~~~~~~~~~va~s~~ 103 (291)
T cd08981 38 FDVYKSKDLKDWEGPYPVFRPPD----DFWAD--DNFWAPEVHEY---KGRYYMFAT-----FHNPGGERRGTAILVSDS 103 (291)
T ss_pred EEEEECCChhcccccceeeccCC----CcCcc--ccccCCeeeee---CCEEEEEEE-----eccCCCceeeEEEEECCC
Confidence 57788999999999999997652 13553 36899999876 777666554 222110000 0011112
Q ss_pred cCceeeCCCCCeE-----EeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEE-eCCCCCCEEece-e
Q 012453 133 PGRIWLDTEGAPI-----QAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYS-SKDMWTWKNEGI-V 205 (463)
Q Consensus 133 pg~~w~dt~Gnpi-----~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~s-S~DLv~W~~~g~-v 205 (463)
|-.+|.+..+.++ .+.|+++..++ +|+.|++....-... ...+|.+.+ +.|+..-..+.. +
T Consensus 104 p~GP~~~~~~~~~~~~~~~~iDp~~f~Dd-DG~~Yl~~~~~~~~~-----------~~~~i~~~eL~~d~~~~~ge~~~i 171 (291)
T cd08981 104 PEGPFVPHSDGPVTPEDWMCLDGTLYVDE-DGKPWMVFCHEWVQV-----------YDGTIEAVRLSPDLSRAIGEPVLL 171 (291)
T ss_pred CCCCCEeCCCCccCCCCCceEcCceEEcC-CCCEEEEEEeccccc-----------CCCCEEEEEeCCCccccCCceEEE
Confidence 5566776543333 34588888775 566666532110000 001244433 456543332222 3
Q ss_pred cccCCccccccc------CCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCC--CCCCceeccccCCCCCC
Q 012453 206 LAAEETNETHDL------YKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDY--PTGPFDYLYSKRPHGFD 277 (463)
Q Consensus 206 L~~~~~~~~~~~------~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~Sds--P~GPf~~~~~~~p~g~~ 277 (463)
+...+.+|.... .....+++|.+++ .++|+|||+|++.. ....++++|+|++ |+|||++.... .....
T Consensus 172 ~~~~~~~w~~~~~~~~~~~~~~~~EgP~i~k-~~~G~YYl~yS~~~--~~~Y~~~~~rs~s~~~~GPy~~~~~p-i~~~~ 247 (291)
T cd08981 172 FRASEAPWVREFGLIGRGSGGYVTDGPFLYR-TKSGRLLMLWSSFS--DGGYAQGVARSESGTLLGPWVQEPEP-LISDD 247 (291)
T ss_pred ecCCcCCcccccccccccCCCeEeeCCEEEE-eCCCcEEEEEEecC--CCCEEEEEEEcCCCCccCCcEECCCc-ccCCC
Confidence 332222332111 1234579999996 35899999998732 2457888998886 99999986531 11223
Q ss_pred ccCceEEEcCCCcEEEEEEecCC---CcEEEEEcCCC
Q 012453 278 SRDMTIFKDDDGVAYLVYSSEDN---SELHIGPLTSD 311 (463)
Q Consensus 278 siDp~vF~DdDG~~YL~yg~~~n---~~i~ia~Ls~D 311 (463)
.-..++|+++||+.|++|..... ....+++++.+
T Consensus 248 ~GH~s~v~~~~G~~~~vyH~~~~~~~~~~~~~~~~~~ 284 (291)
T cd08981 248 GGHGMLFRTFDGRLMLSLHTPNKHPDERPIFIEVDED 284 (291)
T ss_pred CCCCeeEEcCCCCEEEEEECCCCCCCeeeEEEEEeec
Confidence 45678899999999999987521 12444555443
No 43
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=99.45 E-value=5.6e-12 Score=133.80 Aligned_cols=169 Identities=20% Similarity=0.274 Sum_probs=116.5
Q ss_pred CCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEEEccCCEE
Q 012453 158 SRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKY 237 (463)
Q Consensus 158 ~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkY 237 (463)
+|+|+||.+..... ..| ....+..++|+||+||+.++.+|.+.. . .....+|+++++. .+|++
T Consensus 36 ~G~yHlfyq~~p~~---~~~------g~~~Wgha~S~Dlv~W~~~~~al~P~~-~-----~d~~G~~sGsav~--~~g~~ 98 (445)
T TIGR01322 36 KGEYHLFYQWFPFG---PVH------GLKSWGHYTSKDLVHWEDEGVALAPDD-P-----YDSHGCYSGSAVD--NNGQL 98 (445)
T ss_pred CCEEEEEEccCCCC---Ccc------CceEEEEEECCCccccEECCccCcCCC-c-----ccCCceEECeEEe--eCCEE
Confidence 59999998764311 112 123478999999999999999987543 1 1345789999996 78999
Q ss_pred EEEEEEeCCC---CCcceEEEEEeCCCCCCceeccc-c--C-CCC--CCccCceEEEcCCCcEEEEEEecC---CCcEEE
Q 012453 238 VMWMHIDDCN---YTKAAVGVAISDYPTGPFDYLYS-K--R-PHG--FDSRDMTIFKDDDGVAYLVYSSED---NSELHI 305 (463)
Q Consensus 238 ymy~s~~~~~---~~~~~IgVA~SdsP~GPf~~~~~-~--~-p~g--~~siDp~vF~DdDG~~YL~yg~~~---n~~i~i 305 (463)
+|||++.... ...+..++|+|++ .+.|+..+. . . +.+ ...+||.||.+ +|++||++++.. .+.+.+
T Consensus 99 ~l~YTg~~~~~~~~~~~~q~lA~S~D-g~~~~k~~~pvi~~~~~~~~~~fRDP~V~~~-~g~~~M~~g~~~~~~~g~i~l 176 (445)
T TIGR01322 99 TLMYTGNVRDSDWNRESYQCLATMDD-DGHFEKFGIVVIELPPAGYTAHFRDPKVWKH-NGHWYMVIGAQTETEKGSILL 176 (445)
T ss_pred EEEEeccccCCCCCeeEEEEEEEcCC-CCeEEECCCceEeCCCCCCcCcCCCCcEEeE-CCEEEEEEEEecCCCceEEEE
Confidence 9999975321 1234567899988 578987542 1 1 222 24689999985 689999998742 234444
Q ss_pred EEcCCCCCCcc--ccEEEee------cCceeeeeEEEEECCEEEEEEeC
Q 012453 306 GPLTSDYLDVS--NVVRRIL------VGQHREAPALFKHLGTYYMVTSG 346 (463)
Q Consensus 306 a~Ls~D~~~~~--g~~~~i~------~~~~~EgP~vfK~~G~YYL~yS~ 346 (463)
.+ |+|+.+++ +....-. .+...|.|.+|+.+|+++|++|.
T Consensus 177 y~-S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~k~vL~~s~ 224 (445)
T TIGR01322 177 YR-SKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDGQDVLLFSP 224 (445)
T ss_pred EE-CCCcccCeEecccccccccccCCccceEECCeEEEECCcEEEEEec
Confidence 44 78887764 2221110 12368999999999999999984
No 44
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.42 E-value=6.5e-12 Score=125.53 Aligned_cols=211 Identities=16% Similarity=0.115 Sum_probs=122.4
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCC--hhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCC-CccCCCceee
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSP--RAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPM-KDNGNDSFYY 131 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~-a~~~~~~~~i 131 (463)
+++..|+||++||+++.+++.+. ..| .+ +..+..|||.|.+. +...++.|+ +.+.. .+...-...-
T Consensus 33 i~~~~S~Dl~~W~~~g~~~~~~~--~~~~~~~-~~~~~~WAP~v~~~---~g~yy~yy~-----~~~~~~~~~~~v~~s~ 101 (288)
T cd09000 33 VPIFHSKDLVNWELIGHALTRPS--QLDLDGL-PDSGGIWAPTIRYH---DGTFYLITT-----NVDGMKDGGNFIVTAD 101 (288)
T ss_pred ceEEECCCcCCcEEcccccCCcc--cccccCC-CCCCceEcceEEEE---CCEEEEEEE-----ecCCCCCCceEEEEeC
Confidence 56788999999999999997652 112 11 12457899999877 677666666 22211 1100000111
Q ss_pred ecCceeeCCCCCeEEeeCCceEEECCCCEEEEE-EEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEece--eccc
Q 012453 132 YPGRIWLDTEGAPIQAHGGGILYDERSRTYFWY-GEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGI--VLAA 208 (463)
Q Consensus 132 ~pg~~w~dt~Gnpi~ahd~~I~~~~~~g~YYly-gT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~--vL~~ 208 (463)
.|...|.+.--..-.+.|+++..++ +|+.|++ +........ ....++.+.+.+ ...|+..+. .+..
T Consensus 102 ~p~gpw~~~~~~~~~~iDp~vf~d~-dG~~Y~~~~~~~~~~~~---------~~~~~i~~~~l~-~~~~~~~~~~~~~~~ 170 (288)
T cd09000 102 DPAGPWSDPVWLDSGGIDPSLFFDD-DGKVYLVGNGWDERRGY---------NGHGGIWLQEID-LETGKLLGEPKVIWN 170 (288)
T ss_pred CCCCCCcCCEecCCCccCCceeEcC-CCCEEEEecccCCcccc---------CCCCcEEEEEEc-cccCCCCCCcEEEEe
Confidence 2445565321000034688888875 5676655 432111000 012346666553 333433221 1111
Q ss_pred CCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccc--c-C----CCC--CCcc
Q 012453 209 EETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYS--K-R----PHG--FDSR 279 (463)
Q Consensus 209 ~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~--~-~----p~g--~~si 279 (463)
. .....+++|.|++ ++|+|||+|+..... ....+++|+|++|+|||++... . . ..+ ....
T Consensus 171 ~--------~~~~~~Egp~v~k--~~g~YYl~ys~~~~~-~~~~v~~~~s~~~~Gp~~~~~~~~il~~~~~~~~~~~g~g 239 (288)
T cd09000 171 G--------TGGRWPEGPHLYK--RDGWYYLLIAEGGTG-YGHSVTVARSRSITGPYEPAPNNPILTNRDLPDSPIQATG 239 (288)
T ss_pred C--------CCCCCcccCeEEE--ECCEEEEEEecCCCC-CCeEEEEEEeCCCCCCCccCCCCceEEcCCCCCCcceeCC
Confidence 1 0124689999996 899999999865432 2368999999999999997521 1 0 011 2345
Q ss_pred CceEEEcCCCcEEEEEEec
Q 012453 280 DMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 280 Dp~vF~DdDG~~YL~yg~~ 298 (463)
..++|+++||+.|++|...
T Consensus 240 H~~~~~~~dG~~~~~yH~~ 258 (288)
T cd09000 240 HADLVQTPDGEWWAVFLAT 258 (288)
T ss_pred ccceEECCCCCEEEEEEEE
Confidence 6789999999999999864
No 45
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=99.42 E-value=1e-11 Score=131.55 Aligned_cols=177 Identities=21% Similarity=0.216 Sum_probs=118.9
Q ss_pred ceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEE
Q 012453 151 GILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIY 230 (463)
Q Consensus 151 ~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~ 230 (463)
++++. +|+|+||.++.... ..| +...+..++|+||+||+..+.+|.+.. . .....+|+++++.
T Consensus 14 Gl~~~--~G~yHlFyq~~p~~---~~~------g~~~Wgha~S~Dlv~W~~~~~aL~P~~-~-----~d~~g~~sGsav~ 76 (437)
T smart00640 14 GLIYY--KGKYHLFYQYNPFG---PVW------GNIHWGHAVSKDLVHWTHLPVALAPDE-W-----YDSNGVFSGSAVI 76 (437)
T ss_pred eeeEE--CCEEEEEEecCCCC---CCC------CCeEEEEEEcCCcceeeecCcccCCCC-c-----CCCCcEEEEEEEE
Confidence 45665 59999999865321 111 123588999999999999999887543 1 1345699999996
Q ss_pred EccCCEEEEEEEEeCCC-----CCcceEEEEEeCCCCCCceecc--cc---CCC--CCCccCceEEEcCCCcEEEEEEec
Q 012453 231 NDRTGKYVMWMHIDDCN-----YTKAAVGVAISDYPTGPFDYLY--SK---RPH--GFDSRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 231 n~~~GkYymy~s~~~~~-----~~~~~IgVA~SdsP~GPf~~~~--~~---~p~--g~~siDp~vF~DdDG~~YL~yg~~ 298 (463)
.+|+++|||++.... .....+.++.+++....|++.. .. .|. ....+||.||.+++|++||+++..
T Consensus 77 --~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~ 154 (437)
T smart00640 77 --DPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGAS 154 (437)
T ss_pred --CCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEEE
Confidence 678899999875311 1223444555555568898753 21 121 246799999998778999999964
Q ss_pred C---CCcEEEEEcCCCCCCcc--ccEEEe---ecCceeeeeEEEEECC-----EEEEEEeCC
Q 012453 299 D---NSELHIGPLTSDYLDVS--NVVRRI---LVGQHREAPALFKHLG-----TYYMVTSGC 347 (463)
Q Consensus 299 ~---n~~i~ia~Ls~D~~~~~--g~~~~i---~~~~~~EgP~vfK~~G-----~YYL~yS~~ 347 (463)
. .+.+.+.+ |+|+.+++ +..... ..+...|.|-+|+.++ +++|++|..
T Consensus 155 ~~~~~G~i~ly~-S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 155 DEDKTGIALLYR-STDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred ecCCCeEEEEEE-CCCcccCeECCcccccCCCCccceEECCcEEEeCCCCCceeEEEEECcC
Confidence 2 12355544 67887764 322111 1135789999999998 999999965
No 46
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.41 E-value=1.5e-12 Score=128.91 Aligned_cols=213 Identities=21% Similarity=0.246 Sum_probs=128.6
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeeecC
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYYPG 134 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~pg 134 (463)
+++..|+||++|+.++..++... .+.+.. .+..|||.|... +-..++.|+ ...+-..+...-...-.|.
T Consensus 35 i~v~~S~DL~~W~~~g~~~~~~~---~~~~~~-~~~~WAP~i~~~---~g~yy~y~~----~~~~~~~~~~~va~a~~~~ 103 (286)
T PF04616_consen 35 IPVWSSKDLVNWTDAGNVLPPPP---DWDWAN-NGNIWAPEIHYI---NGKYYMYYS----DSGGDAGSGIGVATADSPD 103 (286)
T ss_dssp EEEEEESSSSSEEEEEECESSTT---TTSTTT-SETTEEEEEEEE---TTEEEEEEE----EESTSTTEEEEEEEESSTT
T ss_pred EEEEECCCCcccccceeeecccc---cccccc-cccccCCeEEEc---CCeEEEEEE----ccCCCCCcceeEEEeCCcc
Confidence 56678999999999998887752 122222 223399998866 666444444 0001111110000111244
Q ss_pred ceeeCCCCCe---EEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEE-eCCCCCCEEec-eecccC
Q 012453 135 RIWLDTEGAP---IQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYS-SKDMWTWKNEG-IVLAAE 209 (463)
Q Consensus 135 ~~w~dt~Gnp---i~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~s-S~DLv~W~~~g-~vL~~~ 209 (463)
.+|.+....+ ..+.|++|+.+++ |++|++-....... ....|.+.+ +.|+..+.... .++...
T Consensus 104 Gp~~~~~~~~~~~~~~iD~~vf~d~d-G~~Yl~~~~~~~~~-----------~~~~i~~~~l~~d~~~~~~~~~~~~~~~ 171 (286)
T PF04616_consen 104 GPWTDPGKIPIPGGNSIDPSVFVDDD-GKYYLYYGSWDNGD-----------PGGGIYIAELDPDGTSLTGEPVVVIFPG 171 (286)
T ss_dssp S-EEEEEEEEEESSSSSSEEEEEETT-SEEEEEEEESTTTS-----------SEEEEEEEEEETTTSSEEEEECEEEEEE
T ss_pred cccccccceeeccccccCceEEEecC-CCcEEeCcccCCCc-----------cceeEEeecccCccccccCccccccccc
Confidence 4555432111 1356889998864 77777755432110 012344444 56677777666 333222
Q ss_pred CcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCC--------CCCCccCc
Q 012453 210 ETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRP--------HGFDSRDM 281 (463)
Q Consensus 210 ~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p--------~g~~siDp 281 (463)
. .......+++|.|++ ++|+|||+|+...... ..++++|+|++|.|||+......+ ........
T Consensus 172 ~-----~~~~~~~~Egp~~~k--~~g~yYl~~s~~~~~~-~y~v~~~~s~~~~gp~~~~~~~~~~~~~~~~~~~~g~gH~ 243 (286)
T PF04616_consen 172 D-----EGWDGGVVEGPFVFK--HGGKYYLFYSAGGTGS-PYQVGYARSDSPLGPWEWKKGNPILFSRDGENGVYGPGHG 243 (286)
T ss_dssp S-----GSSTTTBEEEEEEEE--ETTEEEEEEEESGSST-TTEEEEEEESSTTSGGEETTTCBCEGTTBTTSSCEEEEEE
T ss_pred c-----cccCCccccceEEEE--cCCCEEEEEeccCCCC-CceEEEeeccCCCCceeeccCCeEEEeeccCCccccCccC
Confidence 1 112356799999996 8999999999765443 378999999999999997532211 11345678
Q ss_pred eEEEcCCCcEEEEEEec
Q 012453 282 TIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 282 ~vF~DdDG~~YL~yg~~ 298 (463)
++|+++||+.||+|...
T Consensus 244 ~~~~~~~g~~~~~yh~~ 260 (286)
T PF04616_consen 244 SVFKDPDGRWYIVYHAR 260 (286)
T ss_dssp EEEEETTSEEEEEEEEE
T ss_pred CEEECCCCCEEEEEeec
Confidence 89999999999999875
No 47
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=99.41 E-value=1.1e-11 Score=128.60 Aligned_cols=236 Identities=24% Similarity=0.334 Sum_probs=135.7
Q ss_pred ccCcEEEEEeCCCC----CCEEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCC---CCCcc-----
Q 012453 184 DIIGVGCYSSKDMW----TWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDC---NYTKA----- 251 (463)
Q Consensus 184 ~~~gi~v~sS~DLv----~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~---~~~~~----- 251 (463)
+...|.++-|++.. +|+..|.|++...... ....-|+.+++.+..+|+-.|||++... ....+
T Consensus 94 ~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~-----~~s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~ 168 (428)
T PF02435_consen 94 DDARIYLFYSKDGDNANDGWKNGGPVFPEGASFV-----PGSREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATA 168 (428)
T ss_dssp CGEEEEEEEEETT--SGGG-EEEEESS-TTCCCC-----GCEEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEE
T ss_pred CCcEEEEEEecCCCCccCCceECcccCCCCCCCC-----ccCcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhH
Confidence 34568899998887 8999999998654200 2457899999996558999999987432 12223
Q ss_pred eEEEEEeCC----CCCCceecc-ccCCCC-----------CCccCceEEEc-CCCcEEEEEEecC---------------
Q 012453 252 AVGVAISDY----PTGPFDYLY-SKRPHG-----------FDSRDMTIFKD-DDGVAYLVYSSED--------------- 299 (463)
Q Consensus 252 ~IgVA~Sds----P~GPf~~~~-~~~p~g-----------~~siDp~vF~D-dDG~~YL~yg~~~--------------- 299 (463)
+++.+.+++ ..| |+... -+.+.| +..+||.+|+| .+|+.||+|.+..
T Consensus 169 ~~g~~~~d~~~v~i~g-~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~ 247 (428)
T PF02435_consen 169 TLGLIHADDDGVWITG-FSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLG 247 (428)
T ss_dssp EEEEEEECSTEEEEEE-EEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHH
T ss_pred hcCeeecCCCceeEcc-ccceeEeeccchhhhhChhhcCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccc
Confidence 344444454 222 22221 122333 46899999999 7999999998741
Q ss_pred --------------------CCcEEEEEcCCCCCCccccEEEee----cCceeeeeEEEEECCEEEEEEeC-CCCC----
Q 012453 300 --------------------NSELHIGPLTSDYLDVSNVVRRIL----VGQHREAPALFKHLGTYYMVTSG-CTGW---- 350 (463)
Q Consensus 300 --------------------n~~i~ia~Ls~D~~~~~g~~~~i~----~~~~~EgP~vfK~~G~YYL~yS~-~tg~---- 350 (463)
|+.|.+++|+.+......-...++ ....+|.|.|+++||+||||.+. ....
T Consensus 248 ~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~de~ERP~iv~~~gkyYLFt~s~~~~~a~g~ 327 (428)
T PF02435_consen 248 NVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVNDELERPHIVFMNGKYYLFTISHLSTFADGI 327 (428)
T ss_dssp HHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS-EEEEEEEEETTEEEEEEEEEGGGBSTTH
T ss_pred cccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccccccCCcEEEECCEEEEEEEeccccccCCc
Confidence 124889999887653222222222 34689999999999999999963 1111
Q ss_pred -CCCcEEEE-EeCCCCCCceeC-CCccccCCc-ccceeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCe--eEEEE
Q 012453 351 -APNEALVH-AAESIMGPWEDM-GNPCIGGNK-VFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESR--YIWLP 424 (463)
Q Consensus 351 -~~n~~v~~-~S~s~~GPw~~~-g~Pv~~~~~-~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R--~v~lP 424 (463)
.++..++. .++++.|||+.. |+-++-+++ .-....+.+.++++++. | .. +.+-+-+...+....| ..+.|
T Consensus 328 ~g~d~~yg~~~~~~L~g~y~PLNgsGlVl~np~~~~p~~~qtYS~~~~p~-~--~v-~sf~~~~~~~~~~~~~~ggT~AP 403 (428)
T PF02435_consen 328 VGPDGVYGFVVSDSLRGPYKPLNGSGLVLGNPPSQAPWRTQTYSHYVMPD-G--DV-VSFIDYMTNRGEVAYRFGGTFAP 403 (428)
T ss_dssp HTTSEEEEEEEESSTTS--EEGCCTSEEEEESTTSTTSTTCEEEEEEECC-S--CE-EEEEEEESSTTSSSTSECSEE-E
T ss_pred cCCCeEEEEEECccccCCceecCCCceEecCCCCCCCccceeeEEEEECC-C--cE-EEEEeccccccccccccCCeeCC
Confidence 13333344 456699999987 443333222 10012255567888886 4 22 3333444432322122 26767
Q ss_pred ---EEEcC
Q 012453 425 ---LIVRG 429 (463)
Q Consensus 425 ---i~~~~ 429 (463)
|.+++
T Consensus 404 t~~l~i~g 411 (428)
T PF02435_consen 404 TFLLQING 411 (428)
T ss_dssp EEEEEEET
T ss_pred eEEEEEcC
Confidence 55665
No 48
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.41 E-value=1.2e-11 Score=122.71 Aligned_cols=201 Identities=11% Similarity=0.051 Sum_probs=120.9
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhh----hcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCcee
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAA----KRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFY 130 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~----~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~ 130 (463)
+++..|+||++||..+.+++.. |.+. ...+..|||.|.+. +-..++.|+.. +.. .+..++
T Consensus 33 ~~~~~S~DL~~W~~~g~~~~~~-----~~~~~~~~~~~~~~WAP~v~~~---~G~yy~yy~~~-----~~~---~~~~i~ 96 (269)
T cd08989 33 VQIHHSTDLVNWHLIGHPLDRL-----EDLDMKGNPYSGGIWAPCLSYY---DGKFWLIYTAV-----KVW---KDCHNY 96 (269)
T ss_pred cEEEECCccCCCEEccccccCc-----cccccccCCCCCcEEcceEEEE---CCEEEEEEecc-----ccC---CCceEE
Confidence 4678899999999999888664 2221 01356899999887 77766666621 110 111122
Q ss_pred e----ecCceeeCCCCCeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEE-eCCCCCCEEecee
Q 012453 131 Y----YPGRIWLDTEGAPIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYS-SKDMWTWKNEGIV 205 (463)
Q Consensus 131 i----~pg~~w~dt~Gnpi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~s-S~DLv~W~~~g~v 205 (463)
+ .|..+|.+.-.....+.|+++..|+ +|+.||+... | .+|.+.+ +.|+..-......
T Consensus 97 va~sd~~~Gpw~~~~~~~~~~IDp~~f~D~-dG~~Yl~~~~---------~--------~~i~l~~l~~~~~~~~~~~~~ 158 (269)
T cd08989 97 LFTAEDITGPWSRPIFLNYGGFDPSLFHDD-DGKKYLINMG---------W--------SGIRLQEYSPAEKKLIGKPLN 158 (269)
T ss_pred EEEECCCCCCCcCCEECCCCcccCceEEcC-CCCEEEEecC---------C--------CcEEEEEEChhhCCCCCCcee
Confidence 2 2555676421111235688888875 6888887321 1 2344433 2232211110000
Q ss_pred cccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccC------CCC--CC
Q 012453 206 LAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKR------PHG--FD 277 (463)
Q Consensus 206 L~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~------p~g--~~ 277 (463)
...+. ......+++|.+++ ++|+|||+++.....+ ...++||+|++|.|||++..... +.+ ..
T Consensus 159 ----~~~~~--~~~~~~~Egp~~~k--~~G~YYl~~S~~~~~~-~~~~~~~rs~~~~GP~~~~~~~pl~~~~~~~~~~~g 229 (269)
T cd08989 159 ----KVIIK--GTDDGLTEGPHLYK--INGKYYLTTAEGGTGY-IHEETIARSDKIHGPYEGRPDNPLVLWDTPGNPLQK 229 (269)
T ss_pred ----EEEec--CCCCCccccceEEE--ECCEEEEEEeeCCCCC-CeeEEEEEECCCCCCCCcCCCCcceeecCCCCCccc
Confidence 00000 01234689999996 8999999999755432 45789999999999999864310 111 23
Q ss_pred ccCceEEEcCCCcEEEEEEec
Q 012453 278 SRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 278 siDp~vF~DdDG~~YL~yg~~ 298 (463)
....++|+++||+.|++|...
T Consensus 230 ~GH~s~v~~~~G~~~~~~h~~ 250 (269)
T cd08989 230 CGHASLVETPDGKWYLAHLTG 250 (269)
T ss_pred CCCcCeEECcCCCEEEEEEee
Confidence 457789999999999999864
No 49
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.39 E-value=3.1e-11 Score=120.58 Aligned_cols=209 Identities=18% Similarity=0.138 Sum_probs=118.9
Q ss_pred eCCccccchhhhhhccccCCCCCC-CCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCcc--CCCceee
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRG-KRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDN--GNDSFYY 131 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~--~~~~~~i 131 (463)
+++..|+||++||.++.+++.+.. .....+.. .+..|||.|... +-..++.|+. .+..... ..-+..-
T Consensus 22 i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~-~~~~wAP~v~~~---~g~yyl~ys~-----~~~~~~~~~i~va~s~ 92 (288)
T cd08998 22 IAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGG-SGNLWAPDVIYL---NGKYYLYYSV-----STFGSNRSAIGLATSD 92 (288)
T ss_pred eEEEECCCCCCcEECCccccCCCccccccccCC-CCCccCCeEEEE---CCEEEEEEEE-----EeCCCCceEEEEEEeC
Confidence 567889999999999999877621 00011222 568999998776 6665555552 1111000 0000000
Q ss_pred ec-CceeeCCC-------C-CeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEe-CC---CCC
Q 012453 132 YP-GRIWLDTE-------G-APIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSS-KD---MWT 198 (463)
Q Consensus 132 ~p-g~~w~dt~-------G-npi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS-~D---Lv~ 198 (463)
.| -.+|.+.. + +...+.|+.+..++ +|++||+-.... .++.+.+- .| .+.
T Consensus 93 ~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~-dG~~Yl~~~~~~----------------~~i~~~~l~~~~~~~~~ 155 (288)
T cd08998 93 TLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDE-DGKLWLSFGSFW----------------GGIFLVELDPKTGKPLY 155 (288)
T ss_pred CCCCCCCEEcceeeecCCCCCCcccccCCEEEcC-CCCEEEEeeecc----------------CCEEEEEeCcccCCccC
Confidence 12 23444321 1 11235688998875 677888643211 12333332 23 122
Q ss_pred CEEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCC---CCcceEEEEEeCCCCCCceeccc-cC-C
Q 012453 199 WKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCN---YTKAAVGVAISDYPTGPFDYLYS-KR-P 273 (463)
Q Consensus 199 W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~---~~~~~IgVA~SdsP~GPf~~~~~-~~-p 273 (463)
|...+..+...+. ....+++|.|++ ++|+|||+|+..... ....+++||+|++|.|||++... .. .
T Consensus 156 ~~~~~~~i~~~~~-------~~~~~Egp~~~k--~~g~YYl~~S~~~~~~~~~~~y~v~~~~s~~~~GP~~~~~g~~~~~ 226 (288)
T cd08998 156 PGGYGYNIAGRPR-------GHGAIEAPYIIY--RGGYYYLFVSYGGCCAGEDSTYNIRVGRSKSITGPYVDRNGNDMLN 226 (288)
T ss_pred CCCcceEEeccCC-------CCCceeeeEEEE--eCCEEEEEEEcchhcCCCCCceEEEEEEcCCCCCCcCCCCCCchhh
Confidence 3212222211110 134689999996 899999999864322 23568999999999999996421 10 0
Q ss_pred ----------C-C-CCccCceEEEcCCCcEEEEEEec
Q 012453 274 ----------H-G-FDSRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 274 ----------~-g-~~siDp~vF~DdDG~~YL~yg~~ 298 (463)
. + ....+.++|+++||+.||+|...
T Consensus 227 ~~~~~~~~~~~~~~~g~GH~~~~~~~~g~~~~~yH~~ 263 (288)
T cd08998 227 GGGTLYLLSSNGGYVGPGHNSVFTDDDGKDYLVYHYY 263 (288)
T ss_pred CCCcceeeccCCeEEcCCCCEEEECCCCCEEEEEEEE
Confidence 0 1 12458899999999999999875
No 50
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.39 E-value=3e-11 Score=118.08 Aligned_cols=212 Identities=18% Similarity=0.142 Sum_probs=128.5
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeee--
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYY-- 132 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~-- 132 (463)
+++..|.||++|+..+.+++..... +.+.. .+..|||.|... +...++.|+-... +.. ...+.+.
T Consensus 26 i~i~~S~Dl~~W~~~~~~~~~~~~~--~~~~~-~~~~waP~v~~~---~g~yyl~y~~~~~---~~~----~~~i~~a~s 92 (271)
T cd08978 26 VQVWSSKDLVNWRYEGAVFVAWRGR--GEAKD-SGGLWAPEVIYY---EGKYYLYYSVSDF---DYN----GSGIGVATS 92 (271)
T ss_pred EEEEECCccCCcEECCccccccccc--CCccc-CCceeCCeEEEE---CCEEEEEEEcccC---CCC----cccEEEEEC
Confidence 4566789999999999888631101 12222 468999998877 5665666662211 000 0111111
Q ss_pred --cCceeeCC-----CCCeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEecee
Q 012453 133 --PGRIWLDT-----EGAPIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIV 205 (463)
Q Consensus 133 --pg~~w~dt-----~Gnpi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~v 205 (463)
|-..|.+. ......+.||.++.++ +|++||+-...... ....+|.+.++++...|.....+
T Consensus 93 ~d~~g~~~~~~~~~~~~~~~~~iDp~vf~d~-dg~~yl~~~~~~~~-----------~~~~~i~~~~l~~~~~~~~~~~~ 160 (271)
T cd08978 93 EDPTGPFEDKVIRPPTSNNGNSIDPTVFKDD-DGKYYLYYGSGDPG-----------AGFGGIYISELTDDLTKPTGPPV 160 (271)
T ss_pred CCCCCCccccccCcCccCCCCccCcceEEcC-CCCEEEEEecccCC-----------CCCCcEEEEEECcccccccCCce
Confidence 22223221 0111234688888875 47888875432110 01245778887775554333222
Q ss_pred cccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceecccc-------CC-CCCC
Q 012453 206 LAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSK-------RP-HGFD 277 (463)
Q Consensus 206 L~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~-------~p-~g~~ 277 (463)
+.. + .......+++|.+++ .+|+|||+|+.........++++|+|++|.|||+..... .. ....
T Consensus 161 ~~~----~--~~~~~~~~EgP~~~k--~~g~yyl~ys~~~~~~~~y~~~~~~s~~~~Gp~~~~~~~~~~~~~~~~~~~~~ 232 (271)
T cd08978 161 LSA----S--SGNNNAVTEGPTIFK--KNGYYYLTYSANGTGDYGYNIGYATSDSIDGPYVKKGGNAGLESDSAGFVGVG 232 (271)
T ss_pred eee----e--eccCCCceEccEEEE--ECCEEEEEEEeCCCCCCCceEEEEECCCCCCCcCcCCCCcceEeccCCCcccc
Confidence 210 1 011245789999996 889999999986542246789999999999999975432 11 1235
Q ss_pred ccCceEEEcCCCcEEEEEEecC
Q 012453 278 SRDMTIFKDDDGVAYLVYSSED 299 (463)
Q Consensus 278 siDp~vF~DdDG~~YL~yg~~~ 299 (463)
....++|++++|+.|++|....
T Consensus 233 ~gh~~~~~~~~g~~~~~yh~~~ 254 (271)
T cd08978 233 LGHGSVVRDKNGEWYLVYHAYN 254 (271)
T ss_pred CCCceEEECCCCCEEEEEEeec
Confidence 6788999998999999999753
No 51
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.39 E-value=9.4e-12 Score=124.31 Aligned_cols=200 Identities=16% Similarity=0.082 Sum_probs=117.0
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCcc-CCCceeeec
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDN-GNDSFYYYP 133 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~-~~~~~~i~p 133 (463)
++...|+||++||.++.++|.. .+..|||.|.+. +-..++.|+ +.+..... ..-...-.|
T Consensus 40 i~i~~S~DL~~W~~~g~~~~~~-----------~~~~WAP~i~~~---~gkyy~yys-----~~~~~~~~~~~va~ad~p 100 (280)
T cd09002 40 LVIWHSRDLVNWTPVGPALPEY-----------EGDVWAPDLCKY---DGRYYIYFP-----AIPEGGNWTNMVIWADSP 100 (280)
T ss_pred EEEEECCCcCCceEccccccCC-----------CCCEEcCeeEEE---CCEEEEEEE-----eecCCCCceEEEEEECCC
Confidence 5667899999999999877653 346899998776 666455444 22221110 001111225
Q ss_pred CceeeCCC-CCeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccC-C-
Q 012453 134 GRIWLDTE-GAPIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAE-E- 210 (463)
Q Consensus 134 g~~w~dt~-Gnpi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~-~- 210 (463)
..+|.+.- -+.-.+.||++..++ +|++|||-.. . ..+--+.|+..-+.+...+... .
T Consensus 101 ~Gpw~~~~~~~~~~~IDp~vf~Dd-dG~~Yl~~~~--~-----------------~~~~l~~d~~~~~g~~~~~~~~~~~ 160 (280)
T cd09002 101 EGPWSKPIDLKIGGCIDPGHVVDE-DGNRYLFLSG--G-----------------DRVRLTADGLSTDGKLEHVYDGWRY 160 (280)
T ss_pred CCCCcCCEecCCCCccCCceEEcC-CCCEEEEECC--e-----------------eEEEECccccEecCcCEEEecCccc
Confidence 55675521 011114688888865 6899988321 0 0111233443322221111110 0
Q ss_pred -cccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCC--CcceEEEEEeCCCCCCceeccccC-----C-C-C-CCcc
Q 012453 211 -TNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNY--TKAAVGVAISDYPTGPFDYLYSKR-----P-H-G-FDSR 279 (463)
Q Consensus 211 -~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~--~~~~IgVA~SdsP~GPf~~~~~~~-----p-~-g-~~si 279 (463)
..|. ..+..++||.|++ ++|+|||+|+...... ....++||+|++|.|||++..... . . + ...-
T Consensus 161 ~~~~~---~~~~~~Egp~~~k--~~g~YYl~yS~g~~~~~~~~~~v~~ars~s~~GP~~~~~~~pi~~~~~~~~~~~g~G 235 (280)
T cd09002 161 PEDWV---VEGFALEGPKLKK--RNGYYYLTTAVGGTAGPPTGHMVVAARSKSVHGPWENSPYNPLVRTQSPQEPWWSKG 235 (280)
T ss_pred ccccc---cCCcccccceEEE--ECCEEEEEEccCCCCCCCCCEEEEEEECCCCCCCCccCCCCcEEecCCCCCCceeCC
Confidence 0111 0133589999996 9999999998654321 135689999999999999853210 0 0 1 1345
Q ss_pred CceEEEcCCCcEEEEEEec
Q 012453 280 DMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 280 Dp~vF~DdDG~~YL~yg~~ 298 (463)
..++|.++||+.|++|...
T Consensus 236 H~~i~~~~~g~~~~vyH~~ 254 (280)
T cd09002 236 HATLVDGPDGQWWMVYHAY 254 (280)
T ss_pred CCcEEECCCCCEEEEEEee
Confidence 7789998899999999864
No 52
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.35 E-value=2.2e-11 Score=120.93 Aligned_cols=200 Identities=14% Similarity=0.015 Sum_probs=119.9
Q ss_pred eCCccccchhhhhhccccCCCCCCCC-CChhhh---cCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCcee
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKR-SPRAAK---RRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFY 130 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~p~~~~---~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~ 130 (463)
++...|.||++||..+.+++.+.... .+.|.. ..+..|||.|... +-..++.|+. .+....+. ..
T Consensus 36 i~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~~---~gkyy~yys~-----~~~~~~v~---~a 104 (269)
T cd09001 36 APILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLRYH---NGTFYVFFCT-----NTGGTYIY---TA 104 (269)
T ss_pred CEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceEEE---CCEEEEEEEe-----cCCCeEEE---Ec
Confidence 56678999999999998886541000 011211 1246899999887 6675555551 11111111 11
Q ss_pred eecCceeeCCCCCeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEE-eCCCCCCEEece-eccc
Q 012453 131 YYPGRIWLDTEGAPIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYS-SKDMWTWKNEGI-VLAA 208 (463)
Q Consensus 131 i~pg~~w~dt~Gnpi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~s-S~DLv~W~~~g~-vL~~ 208 (463)
-.|-.+|.+.. ....+.|+++..|+ +|+.||+-.. .++.+.+ +.|+........ ++..
T Consensus 105 ~~p~Gpw~~~~-~~~~~iDp~~f~D~-dG~~Yl~~~~------------------~~i~~~~l~~d~~~~~~~~~~~~~~ 164 (269)
T cd09001 105 DDPEGPWTKTA-LDGGYHDPSLLFDD-DGTAYLVYGG------------------GTIRLVELSPDLTGVGGKDQVIIDA 164 (269)
T ss_pred CCCCCCCcCCC-cCCCcccCceEEcC-CCCEEEEeCC------------------CcEEEEEECcccCCcCCCceEEEeC
Confidence 22556676542 11145688888875 5677766321 0244433 567766633222 2222
Q ss_pred CCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccC-CC--CCCccCceEEE
Q 012453 209 EETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKR-PH--GFDSRDMTIFK 285 (463)
Q Consensus 209 ~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~-p~--g~~siDp~vF~ 285 (463)
... ....++||.|++ ++|+|||+++... .....++||+|++|.|||+...... +. .......++|.
T Consensus 165 ~~~-------~~~~~Egp~i~k--~~G~YYl~~S~~~--~~~~~~~~~~s~~~~GP~~~~~~~~~~~~~~~~~gh~~~~~ 233 (269)
T cd09001 165 GEE-------IGLGAEGSHLYK--INGYYYIFNIAWG--GGGRTQTCLRSKSLTGPYESKVVLEDGSTGGNGPHQGGIVD 233 (269)
T ss_pred CCc-------cccccccCeEEE--ECCEEEEEEecCC--CCCceEEEEEeCCCCCCcCCcceecCCCCCCCCCCCEEEEE
Confidence 110 135689999996 8999999999754 2245788999999999999754221 11 12344567888
Q ss_pred cCCCcEEEEEE
Q 012453 286 DDDGVAYLVYS 296 (463)
Q Consensus 286 DdDG~~YL~yg 296 (463)
++||+.|+++.
T Consensus 234 ~~~G~~~~~~~ 244 (269)
T cd09001 234 TPDGEWYFMLF 244 (269)
T ss_pred CCCCCEEEEEc
Confidence 88999888765
No 53
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.31 E-value=8e-11 Score=118.60 Aligned_cols=198 Identities=15% Similarity=0.152 Sum_probs=112.5
Q ss_pred CccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeeec-Cc
Q 012453 57 NPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYYP-GR 135 (463)
Q Consensus 57 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~p-g~ 135 (463)
+..|+||++||..+.++. .+..|||.|.+. +-.++..++.+ ...+. ..-.| |.
T Consensus 25 i~~S~DL~~W~~~g~~~~-------------~~~~WAP~i~~~---~g~~Y~~~~~~-------~~~v~---~s~~p~gp 78 (295)
T cd08982 25 YWHSSDLIDWDFIPTNSL-------------PDEGYAPAVFVY---DGTLYYTASTY-------NSRIY---KTADPLSG 78 (295)
T ss_pred eEECCCcCCceECCcccC-------------CCCcCcCEEEEE---CCEEEEEEeCC-------CceEE---EeCCCCCC
Confidence 567999999999997653 346899999887 44555444421 11110 11113 22
Q ss_pred eeeCC-CCCeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEE-eCCCCCCEEece-ecc--cCC
Q 012453 136 IWLDT-EGAPIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYS-SKDMWTWKNEGI-VLA--AEE 210 (463)
Q Consensus 136 ~w~dt-~Gnpi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~s-S~DLv~W~~~g~-vL~--~~~ 210 (463)
.|.+. ......+.|++++.++ +|+.|++-..... .+|.+.+ +.|+..-..... ++. ..+
T Consensus 79 ~w~~~~~~~~~~~IDp~vf~Dd-DGk~Yl~~g~~~~---------------~~i~~~eL~~d~~~~~g~~~~l~~~~~~~ 142 (295)
T cd08982 79 PWEEVDKSFPPGLADPALFIDD-DGRLYLYYGCSNN---------------YPLRGVEVDPDTFRPIGEPVELIPGNPDK 142 (295)
T ss_pred CccccccccCCCccCCceEECC-CCCEEEEEecCCC---------------CCeEEEEECcccCCccCcceEEEeCCCCC
Confidence 34442 1122345788988875 5777776322110 1122222 223221111111 111 111
Q ss_pred cccccc------cCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccC----CCC--CCc
Q 012453 211 TNETHD------LYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKR----PHG--FDS 278 (463)
Q Consensus 211 ~~~~~~------~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~----p~g--~~s 278 (463)
.+|... ......+++|.+++ ++|+|||+|++........+++||+|++|.|||+...... +.+ ...
T Consensus 143 ~~We~~g~~~~~~~~~~~~EGP~i~k--~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~GP~~~~~~~pil~~~~~~~~g~ 220 (295)
T cd08982 143 HGWERFGENNDNPDKTPWMEGAWMTK--HNGKYYLQYAAPGTEFNTYADGVYVSDSPLGPFTYQPHNPFSYKPGGFITGA 220 (295)
T ss_pred cCeEecCcccccccCCccccccEEEE--ECCEEEEEEeCCCcccCcEeEEEEEeCCCCCCCCcCCCCccccCCCCeEecC
Confidence 112110 00134689999996 8999999999765433456899999999999999764211 111 134
Q ss_pred cCceEEEcCCCcEEEEEEec
Q 012453 279 RDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 279 iDp~vF~DdDG~~YL~yg~~ 298 (463)
.+.++|++.||+.|++|...
T Consensus 221 GH~s~v~~~~G~~~~~yh~~ 240 (295)
T cd08982 221 GHGSTFQDKYGNYWHVGTMT 240 (295)
T ss_pred CcccEEECCCCCEEEEEEEE
Confidence 57789999999999998653
No 54
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=99.29 E-value=3.9e-10 Score=114.16 Aligned_cols=201 Identities=16% Similarity=0.179 Sum_probs=132.0
Q ss_pred CCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceE
Q 012453 149 GGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKV 228 (463)
Q Consensus 149 d~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~v 228 (463)
+.++++. +|+|++|........ .| ....+..++|+||++|+..+.+|.+.... +...+|..++
T Consensus 12 PnG~~~~--~G~yHlFyQ~~P~~~---~~------g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~------d~~g~~SGs~ 74 (308)
T PF00251_consen 12 PNGLVYY--DGKYHLFYQYNPFGP---EW------GNMHWGHATSKDLVHWEHLPVALPPDEEY------DADGCFSGSA 74 (308)
T ss_dssp EEEEEEE--TTEEEEEEEEETTSS---SS-------SBEEEEEEESSSSSEEEEEEEE-SSSGG------GTTEEEEEEE
T ss_pred CccCeEe--CCEEEEEeccCCCCc---cc------ceeEEEEEECCCCCCceeCCceEcccccC------CcCccCcceE
Confidence 3356664 699999987653211 11 23457889999999999999998765321 2456999999
Q ss_pred EEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceecc---cc---CCC--CCCccCceEEEcCCCcEEEEEEecCC
Q 012453 229 IYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLY---SK---RPH--GFDSRDMTIFKDDDGVAYLVYSSEDN 300 (463)
Q Consensus 229 i~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~---~~---~p~--g~~siDp~vF~DdDG~~YL~yg~~~n 300 (463)
+. .+++++|||++...+. .+.+.+|+|.+....|+... .. .|. ....+||.||.+++|++||+.++...
T Consensus 75 ~~--~~~~~~~~YTg~~~~~-~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~ 151 (308)
T PF00251_consen 75 VV--DDDNLVLFYTGNNRDG-KQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD 151 (308)
T ss_dssp EE--ETTCEEEEEEEEETTT-EEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEECTTEEEEEEEEEET
T ss_pred EE--ECCEEEEEEeccCCCC-CeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEecCCEEEEEEecccc
Confidence 97 5568999999876542 67889999976667888743 11 122 24689999977778999999987532
Q ss_pred --CcEEEEEcCCCCCCccccEEEee----cCceeeeeEEEEECCE--------EEEEEeCCCCC-CCCcEEEEEeCC--C
Q 012453 301 --SELHIGPLTSDYLDVSNVVRRIL----VGQHREAPALFKHLGT--------YYMVTSGCTGW-APNEALVHAAES--I 363 (463)
Q Consensus 301 --~~i~ia~Ls~D~~~~~g~~~~i~----~~~~~EgP~vfK~~G~--------YYL~yS~~tg~-~~n~~v~~~S~s--~ 363 (463)
+.+.+.+ ++|+.+++-.-.... .+...|.|-+|+.+++ ++|++|..... ......+++++- .
T Consensus 152 ~~g~i~~y~-S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~~d~~ 230 (308)
T PF00251_consen 152 GRGCILLYT-SDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGDGTGKWVWVLIFSPQGIEDNGHGTYYMVGDFDFD 230 (308)
T ss_dssp TEEEEEEEE-ESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTSSSEEEEEEEEEEEESTTTTTTEEEEEEEEEETT
T ss_pred CcceEEEEE-cCCcccCceeCcccccccccccccccceEEEECCcccccceEEEEEEecccccccccccceEEeEEecCC
Confidence 2343433 688887753322111 1468999999998777 58999852111 122333444442 4
Q ss_pred CCCceeC
Q 012453 364 MGPWEDM 370 (463)
Q Consensus 364 ~GPw~~~ 370 (463)
.+.|+..
T Consensus 231 ~~~f~~~ 237 (308)
T PF00251_consen 231 GGTFTPD 237 (308)
T ss_dssp TTEEEES
T ss_pred CCeeeee
Confidence 5677654
No 55
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.26 E-value=2e-10 Score=113.84 Aligned_cols=208 Identities=13% Similarity=0.062 Sum_probs=124.4
Q ss_pred EeeCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCc--cCCCcee
Q 012453 53 HISHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKD--NGNDSFY 130 (463)
Q Consensus 53 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~--~~~~~~~ 130 (463)
.-.++..|+||++||.++.+|++... -.+.|. ....|||.|..... +-. +.||+.. .+.... ...-+..
T Consensus 30 ~gi~~~sS~DLvnW~~~g~vl~~~~~-~~~~~~--~~~~waP~v~y~~~-~g~-Y~m~~~~----~~~~~~~~~igvA~S 100 (265)
T cd08985 30 GGVSCYSSTDLVNWTFEGLALTPEED-SADLGP--GRIIERPKVIYNAK-TGK-YVMWMHI----DSSDYSDARVGVATS 100 (265)
T ss_pred ccEEEEECCCCccceECceecccccc-cccccc--CcEEECCeEEEeCC-CCE-EEEEEEe----CCCCCcceeEEEEEe
Confidence 34678889999999999999987621 113344 34789998876522 334 5566622 111000 0111111
Q ss_pred eecCceeeCCCC-C--eEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEE-eCCCCCCEEeceec
Q 012453 131 YYPGRIWLDTEG-A--PIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYS-SKDMWTWKNEGIVL 206 (463)
Q Consensus 131 i~pg~~w~dt~G-n--pi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~s-S~DLv~W~~~g~vL 206 (463)
-.|..+|.+... . -..+.|+++..++ +|++||+-.... ..++.+.+ ++|+..+......+
T Consensus 101 d~p~Gpf~~~~~~~~~~~~~~Dp~vf~Dd-DG~~Yl~~~~~~---------------~~~i~i~~L~~d~~~~~~~~~~~ 164 (265)
T cd08985 101 DTPTGPYTYLGSFRPLGYQSRDFGLFVDD-DGTAYLLYSDRD---------------NSDLYIYRLTDDYLSVTGEVTTV 164 (265)
T ss_pred CCCCCCCEECCccCCCCCCccCCceEEcC-CCCEEEEEecCC---------------CCceEEEEeCCCcccccceEEEc
Confidence 235566664221 1 1235688888875 567777644221 12355544 46888776543321
Q ss_pred ccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccC---ceE
Q 012453 207 AAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRD---MTI 283 (463)
Q Consensus 207 ~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siD---p~v 283 (463)
. ....++||.|++ ++|+|||+++... .+....+.+|+|++|.|||+..+...+.+..+.+ ..|
T Consensus 165 ~-----------~~~~~EaP~i~K--~~g~YYL~~S~~t-~~~~~~~~y~~s~s~~GP~~~~~~~~~~~~~t~~sq~~~v 230 (265)
T cd08985 165 F-----------VGAGREAPAIFK--RNGKYYLLTSGLT-GWNPNDARYATATSILGPWTDLGNPGPGGSTTYGSQTTFV 230 (265)
T ss_pred c-----------CCCccccceEEE--ECCEEEEEEccCC-CccCCceEEEEecCCCCCccccCcCCCCCCcEECCCcceE
Confidence 1 235689999996 8999999998752 2234568999999999999998754333333333 334
Q ss_pred EEcC--CCcEEEEEEecC
Q 012453 284 FKDD--DGVAYLVYSSED 299 (463)
Q Consensus 284 F~Dd--DG~~YL~yg~~~ 299 (463)
+.-. .++.||+++...
T Consensus 231 ~~~~g~~~~~~~~~~drw 248 (265)
T cd08985 231 LPVPGSKQTTYIYMGDRW 248 (265)
T ss_pred EEeCCCCCCEEEEEEccc
Confidence 4321 238899998743
No 56
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.19 E-value=5.7e-10 Score=114.35 Aligned_cols=179 Identities=16% Similarity=0.207 Sum_probs=104.0
Q ss_pred EEeeCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCcc----CCC
Q 012453 52 LHISHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDN----GND 127 (463)
Q Consensus 52 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~----~~~ 127 (463)
.+.+.+..|+||++|++.+.+|++. ....|.+ ...|+|.|-+. +..+++.|+ +...+.... ..-
T Consensus 78 ~y~I~~A~S~Dgv~W~~~g~~L~~~---~~g~Wd~--~~vwaP~Vi~~---dGkyYM~Ys----a~~~~~~~~~~~~IGv 145 (349)
T cd08992 78 KCEIWHATSKDGWTWKEEGPAIGRG---EKGAYDD--RSVFTPEVLEH---EGTYYLVYQ----VVKSPYLNRSFESIAM 145 (349)
T ss_pred ceEEEEEECCCCCCceECCccccCC---CCCCccc--cceECcEEEEE---CCEEEEEEE----ecccccCCCCcceEEE
Confidence 4456688999999999999777543 1135775 47999998877 777677776 111111110 000
Q ss_pred ceeeecCceeeCCCCCeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEe---ce
Q 012453 128 SFYYYPGRIWLDTEGAPIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNE---GI 204 (463)
Q Consensus 128 ~~~i~pg~~w~dt~Gnpi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~---g~ 204 (463)
+..-.|-+.|.+. ++||. +-.+...|... +.
T Consensus 146 A~AdSp~GpWtr~-d~Pil---------------------------------------------~p~~dg~w~~d~~~~~ 179 (349)
T cd08992 146 AVADSPYGPWTKS-DEPIL---------------------------------------------SPSNDGIWKGDEDNRF 179 (349)
T ss_pred EEECCcccccccC-CCcEe---------------------------------------------cCCcCCceeeccCcee
Confidence 0111122223221 22222 11122333321 12
Q ss_pred ecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCC------CCcceEEEEEeCCCCCCceeccccCCCCCCc
Q 012453 205 VLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCN------YTKAAVGVAISDYPTGPFDYLYSKRPHGFDS 278 (463)
Q Consensus 205 vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~------~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~s 278 (463)
++.. ... +....+++|.|++ .+|+|||||+++... ....+||||+||+|+|||+.... .|.-...
T Consensus 180 ~~~~-~g~-----wD~~~v~~P~v~~--~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~-nPi~~~~ 250 (349)
T cd08992 180 LVKK-KGS-----FDSHKVHDPCLFP--FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPY-NPITNSG 250 (349)
T ss_pred Eecc-CCC-----cccCceECCEEEE--ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCC-CcccCCC
Confidence 2221 111 2456789999996 799999999986421 23578999999999999997643 2221122
Q ss_pred cCceEEEcCCCcEEEEEEe
Q 012453 279 RDMTIFKDDDGVAYLVYSS 297 (463)
Q Consensus 279 iDp~vF~DdDG~~YL~yg~ 297 (463)
...+|+.+.+|-++|+-+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~d 269 (349)
T cd08992 251 HETCVWQYKGGIAAMLTTD 269 (349)
T ss_pred CceEEEecCCceEEEEecc
Confidence 3458888888877887664
No 57
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.15 E-value=2e-09 Score=107.46 Aligned_cols=213 Identities=15% Similarity=0.170 Sum_probs=121.4
Q ss_pred eCCccccchhhhhhccccCC-CCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceee--
Q 012453 55 SHNPSFRELVEVEEENIQIP-PPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYY-- 131 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i-- 131 (463)
++...|+||++|+.+...++ .+ ....+. .+..|||.|... +-.+++.|+- .+... .....+++
T Consensus 23 ~~i~~S~dl~~w~~~~~~~~~~~---~~~~~~--~~~~WAP~i~~~---~g~yylyys~-----~~~~~-~~~~~~~v~~ 88 (288)
T cd08980 23 IELRRSDTLAGLATAESKVVWTP---PDSGPY--SGNLWAPELHYI---DGKWYIYFAA-----GDGGG-NANHRMYVLE 88 (288)
T ss_pred EEEEecCChhHhhcCCcEEEecC---CCCCCc--cccEECceEEEE---CCEEEEEEEc-----cCCCC-CcceeEEEEE
Confidence 56788999999998864322 11 001132 457899999776 6665555551 11100 00001111
Q ss_pred -----ecCceeeCCCCCe-----EEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEE
Q 012453 132 -----YPGRIWLDTEGAP-----IQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKN 201 (463)
Q Consensus 132 -----~pg~~w~dt~Gnp-----i~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~ 201 (463)
.|..+|.+. +.. ..+.|++++.++ |++|++-....... ....++.+.+.+|...+..
T Consensus 89 a~~~~~~~Gpw~~~-~~~~~~~~~~~iDp~~~~dd--G~~Yl~~~~~~~~~----------~~~~~i~~~~l~~~~~~~g 155 (288)
T cd08980 89 NAGADPPTGPWTFK-GRLADPTDRWAIDGTVFEHN--GQLYFVWSGWEGRT----------NGNQNLYIAKMSNPWTLTG 155 (288)
T ss_pred eCCCCCCCCCceEe-eEeccCCCCeeeeeEEEEEC--CEEEEEEEccCCCC----------CCCccEEEEECCCCCccCC
Confidence 134556543 111 124588888763 88887754322100 0123566666666555554
Q ss_pred eceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCC---CCC--ceecccc--C--
Q 012453 202 EGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYP---TGP--FDYLYSK--R-- 272 (463)
Q Consensus 202 ~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP---~GP--f~~~~~~--~-- 272 (463)
+..++......|.. .....++||.+++ ++|+|||+|++........+++||+++++ .|| |+..+.. .
T Consensus 156 ~~~~i~~p~~~we~--~~~~~~EgP~~~k--~~G~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~~~pil~~~ 231 (288)
T cd08980 156 PRVLISRPEYDWER--QGPGVNEGPAALK--RNGKVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKSPTPVFQSS 231 (288)
T ss_pred cceEecCCCCCcee--cCceeeECcEEEE--ECCEEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCCCCCceecC
Confidence 44444433222311 1124689999996 88999999998654334678999998754 555 5433211 0
Q ss_pred C--CCCCccCceEEEcCCCc-EEEEEEec
Q 012453 273 P--HGFDSRDMTIFKDDDGV-AYLVYSSE 298 (463)
Q Consensus 273 p--~g~~siDp~vF~DdDG~-~YL~yg~~ 298 (463)
. .-......++|+++||+ .||+|.+.
T Consensus 232 ~~~~~~g~GH~~iv~~~~G~~~~~~yH~~ 260 (288)
T cd08980 232 PENGVYGPGHNSFTKSPDGTEDWIVYHAR 260 (288)
T ss_pred CCCccCcCCccceEECCCCCEEEEEEccc
Confidence 1 11245788899999998 99999875
No 58
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.11 E-value=2.7e-09 Score=107.11 Aligned_cols=192 Identities=15% Similarity=0.106 Sum_probs=117.1
Q ss_pred eeCCccccc-hhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCc-c--CCCce
Q 012453 54 ISHNPSFRE-LVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKD-N--GNDSF 129 (463)
Q Consensus 54 ~~~~~~~~~-l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~-~--~~~~~ 129 (463)
.+.+..|.| |++|+..+..+.+. +.|.. ...|||.|-.+ +.. ++||+ ++ .|... . ....+
T Consensus 48 ~i~~a~S~D~l~~W~~~g~~~~~~-----~~~~~--~~~WAP~v~~~---~G~-y~myy----s~-~~~~~~~~~~~~~i 111 (294)
T cd08984 48 DIGVASSKDGGATWTYRGTADGLE-----FECGR--NTFWAPEVVWH---GGV-YHMYV----TY-IPGVPPDWGGPRRI 111 (294)
T ss_pred eEEEEEeCCCCCCCEEeeeeccCC-----CCCcc--cceeCceEEEE---CCE-EEEEE----Ee-cCCCCcccCCCcEE
Confidence 366788999 99999998655432 35553 35899999777 666 44555 21 11110 0 00011
Q ss_pred eeecC---ceeeCCCCCeE---EeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEec
Q 012453 130 YYYPG---RIWLDTEGAPI---QAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEG 203 (463)
Q Consensus 130 ~i~pg---~~w~dt~Gnpi---~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g 203 (463)
...-+ ..|....--.+ .+-|++++.++ +|+|||+.+.... ...+.+..|+||.+|+..+
T Consensus 112 ~~a~S~Dl~~w~~~~~~~~~~~~~iD~~vf~~~-dg~~yl~y~~~~~--------------~~~~~~a~s~D~~~w~~~~ 176 (294)
T cd08984 112 VHYTSPNLWDWTFVGRVDLDSDRVIDACVFKLP-DGRWRMWYKDERR--------------GSTTYAADSEDLYHWTVEG 176 (294)
T ss_pred EEEECCCcCcceECCccccCCCCcEEeEEEEeC-CCEEEEEEECCCC--------------CeEEEEEECCCCCEEEeCC
Confidence 11111 12322110001 12367777653 6899999874321 1235677899999999876
Q ss_pred eecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCC-------CCC
Q 012453 204 IVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRP-------HGF 276 (463)
Q Consensus 204 ~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p-------~g~ 276 (463)
.++.. ...+.|.|++ .+|+|||++.. ...+++++|+++. +|++.+.... .+.
T Consensus 177 ~~i~~------------~~~EgP~v~k--~~g~yym~~~~------~~g~~~~~S~D~~-~W~~~~~~l~~~~~~~~~~~ 235 (294)
T cd08984 177 PVLGD------------RPHEGPNVFR--WKGYYWMIIDE------WKGLGVYRSKDAE-NWERQGGILLKPGTRPDDGA 235 (294)
T ss_pred ccccC------------CCCCCCCeeE--ECCEEEEEEcC------CceEEEEECCChh-hcEECCeeeccCCCCccccc
Confidence 55431 1136799996 78999998632 1358899999998 9998764311 133
Q ss_pred CccCceEEEcCCCcEEEEEEec
Q 012453 277 DSRDMTIFKDDDGVAYLVYSSE 298 (463)
Q Consensus 277 ~siDp~vF~DdDG~~YL~yg~~ 298 (463)
....+++|+.+ |+.||+|...
T Consensus 236 ~~~H~~i~~~~-~~~y~~Yh~~ 256 (294)
T cd08984 236 KGRHADVVVTG-DRAYIFYFTH 256 (294)
T ss_pred cccCCcEEEeC-CEEEEEEEec
Confidence 45779999754 6999999864
No 59
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=99.07 E-value=4.2e-09 Score=105.48 Aligned_cols=205 Identities=17% Similarity=0.198 Sum_probs=124.2
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeee--
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYY-- 132 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~-- 132 (463)
.-|..|+||+||++.+.+|+|. .... .+..|++.+..- ++..+.+.|| +.. ...........+.+.
T Consensus 34 wgha~S~Dlv~W~~~~~al~p~------~~~d-~~g~~sGsav~~--~~g~~~~~YT-g~~--~~~~~~~~~~~lA~S~d 101 (298)
T cd08996 34 WGHATSKDLVHWEHLPVALAPD------DPYD-SGGCFSGSAVVD--DNGKLVLFYT-GNV--KLDGGRRQTQCLAYSTD 101 (298)
T ss_pred EEEEEecCccceeECCcccCCC------Cccc-CCeEEeCeEEEc--CCCcEEEEEe-cee--CCCCCceEEEEEEEEcC
Confidence 5678999999999999999763 2222 356778755443 2255566666 111 000000000111122
Q ss_pred cCceeeCCCCCeEE---------eeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEec
Q 012453 133 PGRIWLDTEGAPIQ---------AHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEG 203 (463)
Q Consensus 133 pg~~w~dt~Gnpi~---------ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g 203 (463)
.+..|.....+|+. .+||.|.+++ |+|||+-+.... .....+.+|+|+||.+|+..+
T Consensus 102 dg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~~--g~~~m~~g~~~~------------~~~~~i~ly~S~Dl~~W~~~~ 167 (298)
T cd08996 102 DGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWHD--GKWYMVLGAGTE------------DGTGRILLYRSDDLKNWEYLG 167 (298)
T ss_pred CCCEEEECCCCceEcCCCCCCCcccCCeEEeEC--CEEEEEEEEEec------------CCCcEEEEEECCCCCCCEEcc
Confidence 56677766666664 2699999875 899988664321 012458899999999999988
Q ss_pred eecccCCcccccccCCCCeeeeceEEEEccC--CEEEEEEEEeCCCC--CcceEEEEEeCCCCCCceecc-c--cCCCCC
Q 012453 204 IVLAAEETNETHDLYKLNVLERPKVIYNDRT--GKYVMWMHIDDCNY--TKAAVGVAISDYPTGPFDYLY-S--KRPHGF 276 (463)
Q Consensus 204 ~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~--GkYymy~s~~~~~~--~~~~IgVA~SdsP~GPf~~~~-~--~~p~g~ 276 (463)
.++.... ..+.+.++|+++. .+ |+|||+|+...... ......+++.+-..+.|+... . ....|.
T Consensus 168 ~~~~~~~-------~~~~~~EcP~l~~--l~~~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~~~~~~~~~~~~~~lD~G~ 238 (298)
T cd08996 168 ELLTSLG-------DFGYMWECPDLFP--LDVEGKWVLIFSPQGLEPEGNGSGTGYLVGDFDGTTFTFDHTEFGELDYGF 238 (298)
T ss_pred eecccCC-------CccceEeCCcEEE--ECCCCeEEEEECCCCCCCCCCccceEEEEEEEECCCCeEecCCceEecCCC
Confidence 7642111 1245678999996 77 99999999764321 124455666654445666431 1 122344
Q ss_pred CccCceEEEcCCCcEEEE
Q 012453 277 DSRDMTIFKDDDGVAYLV 294 (463)
Q Consensus 277 ~siDp~vF~DdDG~~YL~ 294 (463)
...=|..|.|++|+..|+
T Consensus 239 dfYA~q~~~~~~~r~i~~ 256 (298)
T cd08996 239 DFYAPQTFVDPDGRRILI 256 (298)
T ss_pred CeEeCceeeCCCCCEEEE
Confidence 556677888877775544
No 60
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.02 E-value=1.3e-08 Score=99.84 Aligned_cols=159 Identities=13% Similarity=0.091 Sum_probs=95.0
Q ss_pred eeCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeee-
Q 012453 54 ISHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYY- 132 (463)
Q Consensus 54 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~- 132 (463)
...+..|+||++||..+.++|+. ..+.+. .+..|+|.|.... +-.+.+.|+ .......... .+.+.
T Consensus 34 ~~~~a~S~D~~~w~~~~~~l~~~---~~~~~~--~~~~~~p~v~~~~--dg~~~~~Yt-~~~~~~~~~~-----~i~~A~ 100 (276)
T cd08979 34 RIGAASSDDGTWWTRPPAPLPPG---PPGSFD--DGGVWTPSVVRDP--DGTYRMFYT-GYDRPKGAVQ-----RIGLAT 100 (276)
T ss_pred eeEEEEcCCCCccEECCcCccCC---CCCchh--cCCeEcceEEEcC--CCeEEEEEe-cccCCCCCcc-----eEEEEE
Confidence 36788999999999999888322 113443 3578999777652 145444444 2111001110 01111
Q ss_pred --cCceeeCCCCCe---------------EEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCC
Q 012453 133 --PGRIWLDTEGAP---------------IQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKD 195 (463)
Q Consensus 133 --pg~~w~dt~Gnp---------------i~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~D 195 (463)
.+..|.....++ ....||.|++++++|+|||+.+.... .....|.+++|+|
T Consensus 101 S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~------------~~~~~i~~a~S~D 168 (276)
T cd08979 101 SKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDA------------DERGAIGLATSPD 168 (276)
T ss_pred CCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEcc------------CCCcEEEEEECCC
Confidence 122233222221 12368999988766999997664321 0124588999999
Q ss_pred CCCCEEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeC
Q 012453 196 MWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDD 245 (463)
Q Consensus 196 Lv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~ 245 (463)
|++|+..+.++... ..+ ....+++|.+++ .+|+|||+|+...
T Consensus 169 ~~~W~~~~~~~~~~-~~~-----~~~~~e~P~~~~--~~g~~~l~~~~~~ 210 (276)
T cd08979 169 LIHWTPVPPPPGPR-TGY-----DDGQLEVPQVVK--IDGRWYLLYSGRN 210 (276)
T ss_pred CCcceECCCCCCCC-Ccc-----cCCcCccceEEE--ECCEEEEEEEecC
Confidence 99999988653111 111 245689999996 7899999999764
No 61
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.97 E-value=6.5e-08 Score=96.60 Aligned_cols=176 Identities=19% Similarity=0.242 Sum_probs=107.8
Q ss_pred eeeeceEEEEccCCEEEEEEEEeCC---CCCcceEEEEEeCCCCCCceeccccC---CCCCCccCceEEEcC-CCcEEEE
Q 012453 222 VLERPKVIYNDRTGKYVMWMHIDDC---NYTKAAVGVAISDYPTGPFDYLYSKR---PHGFDSRDMTIFKDD-DGVAYLV 294 (463)
Q Consensus 222 ~iWAP~vi~n~~~GkYymy~s~~~~---~~~~~~IgVA~SdsP~GPf~~~~~~~---p~g~~siDp~vF~Dd-DG~~YL~ 294 (463)
.+=-|.|++.+.+|+|||+++.... ......|.+++|++. -.|+..+... +.....-.|.+|.|+ +|++||+
T Consensus 17 ~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DL-v~W~~~~~~~~~~~~~~~~WAPev~~d~~~g~y~~~ 95 (276)
T cd08983 17 GLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDL-VNWTFQRLVKVNPPNAGNTWAPEAFWDAERGQYVVY 95 (276)
T ss_pred CccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcc-cCCcccceeecCCCCcCcEeCccceEcCCCCeEEEE
Confidence 3456999985468999999986531 113467999999996 4788765321 111233489999985 8999999
Q ss_pred EEecCC------CcEEEEEcC-CCCCCccccEEEee-cC-ceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEEEeCCCCC
Q 012453 295 YSSEDN------SELHIGPLT-SDYLDVSNVVRRIL-VG-QHREAPALFKHLGTYYMVTSGCTGWAPNEALVHAAESIMG 365 (463)
Q Consensus 295 yg~~~n------~~i~ia~Ls-~D~~~~~g~~~~i~-~~-~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~~S~s~~G 365 (463)
|..... ....+.-.+ .|+..++.. ..+. .+ ..+. +.||+.+|+|||+|..... ......+|+++.|
T Consensus 96 ~s~~~~~~~~~~~~~~i~~~tt~Df~tft~p-~~~~~~~~~~ID-~~v~~~~g~~Yl~~k~~~~---~~i~~~~s~~l~g 170 (276)
T cd08983 96 WSSRLYDNTGGFYNYRLYATTTSDFVTFTEP-KVWIDLGANVID-TTVVKVGGTYYRFYKNEGS---KDIELARSKSLTG 170 (276)
T ss_pred EecccCCCCCCCccEEEEEEecCcccccCCC-eEeecCCCCeEe-eEEEEeCCEEEEEEecCCC---CcEEEEEeCCCCC
Confidence 997422 122232233 477666543 2222 22 2344 4899999999999975431 2333457999999
Q ss_pred CceeCCCccccCCcccceeccCCCceEEEcccCCcccEEEEEeEeC
Q 012453 366 PWEDMGNPCIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWN 411 (463)
Q Consensus 366 Pw~~~g~Pv~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~ 411 (463)
||+.........+ ....+..|++..+...||||+ |.+.
T Consensus 171 ~~~~~~~~~~~~~-------~~~EgP~v~k~~~~~~y~L~~-d~y~ 208 (276)
T cd08983 171 PWTIVGTGDAGWG-------GAVEGPTVFKLNNGGGWYLYG-DNYS 208 (276)
T ss_pred CceEecccccCCC-------CceeCCeEEEECCCCEEEEEE-EECC
Confidence 9998754322111 111223577776543566655 6554
No 62
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=98.92 E-value=3.6e-08 Score=101.24 Aligned_cols=194 Identities=14% Similarity=0.144 Sum_probs=113.6
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCcc--CC--CCCcc--C-C-
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTA--ID--PMKDN--G-N- 126 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~--~d--p~a~~--~-~- 126 (463)
+.|..|+||++|++.+..+|+ .+.. +...|++-+-. ..+..+.+.|| +.... .. +.... . .
T Consensus 43 wgh~~S~dlv~W~~~~~l~p~-------~~~d-~~g~wSGsa~~--~~dg~~~lfYT-g~~~~~~~~~~~~Q~ia~a~~~ 111 (349)
T cd08997 43 IGYFYSRAGGNWIDGGKVFPD-------GLSP-GSREWSGSATL--DDDGTVQLFYT-AVGRKGEPQPTFTQRLALARGT 111 (349)
T ss_pred EEEEEeCCCCcccCCCccCCC-------Cccc-CCCeEcceEEE--eCCCeEEEEEe-ccccCCCCCCCceEEEEEEECC
Confidence 778999999999998876774 3444 46888885433 22456566666 22100 00 00000 0 0
Q ss_pred -----------CceeeecCceeeCC--------CCCeE-EeeCCceEEECCCCEEEEEEEecCCCC-cc-----------
Q 012453 127 -----------DSFYYYPGRIWLDT--------EGAPI-QAHGGGILYDERSRTYFWYGEYKDGPT-YH----------- 174 (463)
Q Consensus 127 -----------~~~~i~pg~~w~dt--------~Gnpi-~ahd~~I~~~~~~g~YYlygT~~~g~~-~~----------- 174 (463)
....+.+-..+..+ .++.+ .-+||.++.++.+|++||+-+.+.+.. ..
T Consensus 112 ~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~ 191 (349)
T cd08997 112 LSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRV 191 (349)
T ss_pred CcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCcccccccccccc
Confidence 11122222233322 11222 237999999876788888766543211 00
Q ss_pred ----ccccc-ceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCC-
Q 012453 175 ----AHKKA-AARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNY- 248 (463)
Q Consensus 175 ----~~~~g-~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~- 248 (463)
....+ .......|+.++.|+||.+|+..+.++....+ ...+++|+++. .+|+|||+++.....+
T Consensus 192 ~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v--------~d~~E~P~v~~--~~gk~yL~~s~~~~~~~ 261 (349)
T cd08997 192 LPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGV--------NDELERPHVVF--HNGKYYLFTISHRSTFA 261 (349)
T ss_pred ccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCc--------CCceEcceEEE--ECCEEEEEEeCCcCccc
Confidence 00000 01112335666678899999999887654321 34589999996 8999999998654322
Q ss_pred ----CcceEEEEEeCCCCCCceecc
Q 012453 249 ----TKAAVGVAISDYPTGPFDYLY 269 (463)
Q Consensus 249 ----~~~~IgVA~SdsP~GPf~~~~ 269 (463)
+.-.+..++|+++.|||+...
T Consensus 262 ~~~~~~~~~~g~vsdsl~GP~~~~n 286 (349)
T cd08997 262 PGLSGPDGLYGFVSDSLRGPYKPLN 286 (349)
T ss_pred cccCCCCcEEEEEeCCCCCCCccCC
Confidence 122466779999999999864
No 63
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=98.83 E-value=1.6e-07 Score=99.87 Aligned_cols=208 Identities=17% Similarity=0.180 Sum_probs=112.6
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCce-eeec
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSF-YYYP 133 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~-~i~p 133 (463)
--|..|+||+|||+.+.+|+|- ..+- ++..+++-+-.- +..+.+.|| ++....+ ........+ +-..
T Consensus 57 Wgha~S~Dlv~W~~~~~al~P~-----~~~d--~~G~~sGsav~~---~g~~~l~YT-g~~~~~~-~~~~~~q~lA~S~D 124 (445)
T TIGR01322 57 WGHYTSKDLVHWEDEGVALAPD-----DPYD--SHGCYSGSAVDN---NGQLTLMYT-GNVRDSD-WNRESYQCLATMDD 124 (445)
T ss_pred EEEEECCCccccEECCccCcCC-----Cccc--CCceEECeEEee---CCEEEEEEe-ccccCCC-CCeeEEEEEEEcCC
Confidence 4589999999999999999764 2232 235677754432 445555665 2211000 000000000 0113
Q ss_pred CceeeCCCCCeEEe----------eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEec
Q 012453 134 GRIWLDTEGAPIQA----------HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEG 203 (463)
Q Consensus 134 g~~w~dt~Gnpi~a----------hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g 203 (463)
+..|... ++||.. +||.|.+. +|+|||+-...... ....+.+|+|+||++|+..+
T Consensus 125 g~~~~k~-~~pvi~~~~~~~~~~fRDP~V~~~--~g~~~M~~g~~~~~------------~~g~i~ly~S~Dl~~W~~~g 189 (445)
T TIGR01322 125 DGHFEKF-GIVVIELPPAGYTAHFRDPKVWKH--NGHWYMVIGAQTET------------EKGSILLYRSKDLKNWTFVG 189 (445)
T ss_pred CCeEEEC-CCceEeCCCCCCcCcCCCCcEEeE--CCEEEEEEEEecCC------------CceEEEEEECCCcccCeEec
Confidence 3344332 334442 48888775 47898864322110 01236799999999999999
Q ss_pred eecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCC-----C-CcceEEEEEe--CCCCCCceecccc--CC
Q 012453 204 IVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCN-----Y-TKAAVGVAIS--DYPTGPFDYLYSK--RP 273 (463)
Q Consensus 204 ~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~-----~-~~~~IgVA~S--dsP~GPf~~~~~~--~p 273 (463)
.++.....+.. + .+.+.++|+++. .+|+++|+|+..... + +....++.+. |-..+.|+..... ..
T Consensus 190 ~~~~~~~~~~~-~--~g~~~ECPdlf~--l~~k~vL~~s~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~~~~lD 264 (445)
T TIGR01322 190 EILGDGQNGLD-D--RGYMWECPDLFS--LDGQDVLLFSPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTEFHELD 264 (445)
T ss_pred ccccccccccC-C--ccceEECCeEEE--ECCcEEEEEeccccCcccccccccccceeEEEEEECCCCEEecCCCCceec
Confidence 76543211100 0 234567999996 789999999865321 1 1112344554 3223556542111 12
Q ss_pred CCCCccCceEEEcCCCcEEEE
Q 012453 274 HGFDSRDMTIFKDDDGVAYLV 294 (463)
Q Consensus 274 ~g~~siDp~vF~DdDG~~YL~ 294 (463)
.|....=|..|.|++|+.+|+
T Consensus 265 ~G~dfYA~qtf~~~~gr~i~~ 285 (445)
T TIGR01322 265 YGFDFYAPQTFLAPDGRRILV 285 (445)
T ss_pred cCcCceeeeeEECCCCCEEEE
Confidence 344445566788888876554
No 64
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=98.81 E-value=4.5e-08 Score=99.11 Aligned_cols=223 Identities=17% Similarity=0.225 Sum_probs=121.3
Q ss_pred hhheeeeeccCCCCceeeEEeeCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCC
Q 012453 34 LHFFSLVSHKDGTSGEIELHISHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPD 113 (463)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~ 113 (463)
.|||.+.+-.....+.. .--|..|+||+|||+.+.||+|- .... +.-.|+--+. .+++ .+..+|| +
T Consensus 22 yHlFyQ~~P~~~~~g~~---~WgHa~S~Dlv~W~~~~~aL~P~------~~~d-~~g~~SGs~~--~~~~-~~~~~YT-g 87 (308)
T PF00251_consen 22 YHLFYQYNPFGPEWGNM---HWGHATSKDLVHWEHLPVALPPD------EEYD-ADGCFSGSAV--VDDD-NLVLFYT-G 87 (308)
T ss_dssp EEEEEEEETTSSSS-SB---EEEEEEESSSSSEEEEEEEE-SS------SGGG-TTEEEEEEEE--EETT-CEEEEEE-E
T ss_pred EEEEeccCCCCccccee---EEEEEECCCCCCceeCCceEccc------ccCC-cCccCcceEE--EECC-EEEEEEe-c
Confidence 35555555443333212 13479999999999999999875 2223 2234444222 2223 4555555 1
Q ss_pred CCccCCCCCccCCCceeeecCceeeCCC-CCeEEe----------eCCceEEECCCCEEEEEEEecCCCCccccccccee
Q 012453 114 MKTAIDPMKDNGNDSFYYYPGRIWLDTE-GAPIQA----------HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAAR 182 (463)
Q Consensus 114 ~~t~~dp~a~~~~~~~~i~pg~~w~dt~-Gnpi~a----------hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~ 182 (463)
+ ..+. ..+-.-+.....+..|.... +|||+. +||.|+..++ ++|||+-.....
T Consensus 88 ~--~~~~-~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~~-~~~~m~~g~~~~------------ 151 (308)
T PF00251_consen 88 N--NRDG-KQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRED-GRWYMLLGAGRD------------ 151 (308)
T ss_dssp E--ETTT-EEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEECT-TEEEEEEEEEET------------
T ss_pred c--CCCC-CeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEecC-CEEEEEEecccc------------
Confidence 1 1111 11111111112445565544 466543 5889977764 889887643221
Q ss_pred eccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEEEccCC------EEEEEEEEeCCCCCcceEEEE
Q 012453 183 VDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTG------KYVMWMHIDDCNYTKAAVGVA 256 (463)
Q Consensus 183 ~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~G------kYymy~s~~~~~~~~~~IgVA 256 (463)
....+.+|+|+||.+|+..+..+..... .+...++|+++.-...+ +++|.++...........+++
T Consensus 152 -~~g~i~~y~S~Dl~~W~~~~~l~~~~~~-------~g~~~ECPdlf~l~~~~~~~~~~~~vl~~s~~g~~~~~~~~~Y~ 223 (308)
T PF00251_consen 152 -GRGCILLYTSDDLIHWEYLGPLFIPGDN-------GGGMWECPDLFPLDGKGDGTGKWVWVLIFSPQGIEDNGHGTYYM 223 (308)
T ss_dssp -TEEEEEEEEESSSSSEEEEEEESEEETT-------TSSEEEEEEEEEEEBTTSSSEEEEEEEEEEEESTTTTTTEEEEE
T ss_pred -CcceEEEEEcCCcccCceeCcccccccc-------cccccccceEEEECCcccccceEEEEEEecccccccccccceEE
Confidence 1135889999999999999987664321 25677899999632221 257777774332123444555
Q ss_pred EeCC--CCCCceec-ccc--CCCCCCccCceEEEcCCC-cEEEE
Q 012453 257 ISDY--PTGPFDYL-YSK--RPHGFDSRDMTIFKDDDG-VAYLV 294 (463)
Q Consensus 257 ~Sds--P~GPf~~~-~~~--~p~g~~siDp~vF~DdDG-~~YL~ 294 (463)
+.+- ..+.|+.. ... ...|....=+..|.|++| +.+|+
T Consensus 224 vG~~d~~~~~f~~~~~~~~~lD~G~dfYA~qtf~~~~~~r~i~~ 267 (308)
T PF00251_consen 224 VGDFDFDGGTFTPDDSSFQRLDYGFDFYAPQTFYDPDGGRRILI 267 (308)
T ss_dssp EEEEETTTTEEEESSTTSEESBSSSS-EEEEEEEETTTTEEEEE
T ss_pred eEEecCCCCeeeeeccccceeccCccccCCchhcCCCcCcEEEE
Confidence 5543 56778754 111 123443445667888766 54443
No 65
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=98.79 E-value=6.7e-07 Score=86.14 Aligned_cols=195 Identities=19% Similarity=0.255 Sum_probs=123.0
Q ss_pred eCCceEEECCCCEEEEEEEecC-CCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeec
Q 012453 148 HGGGILYDERSRTYFWYGEYKD-GPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERP 226 (463)
Q Consensus 148 hd~~I~~~~~~g~YYlygT~~~-g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP 226 (463)
-|+.|++. +|+|.+|+|..+ +..| +--.|.+ ..+|...+.+-.- .+ ....-||
T Consensus 26 KD~T~V~y--nGk~~VyAtt~d~~~~y-------------~sm~f~~--Ftdws~~~sA~q~-------~m--~~~~vAP 79 (271)
T PF03664_consen 26 KDFTIVPY--NGKHHVYATTADTGGGY-------------GSMNFGP--FTDWSQMASASQN-------YM--DQSAVAP 79 (271)
T ss_pred cCceEEeE--CCEEEEEEEeccCCCcc-------------ceEeeec--cCCHHHhhccccc-------cC--Ccccccc
Confidence 46777765 599999999753 2221 1122443 5678877654211 01 2235799
Q ss_pred eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCC--ceecccc-----CCCCCCccCceEEEcCCCcEEEEEEecC
Q 012453 227 KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGP--FDYLYSK-----RPHGFDSRDMTIFKDDDGVAYLVYSSED 299 (463)
Q Consensus 227 ~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GP--f~~~~~~-----~p~g~~siDp~vF~DdDG~~YL~yg~~~ 299 (463)
.|+|=+..+++||.|-... ....+.++++|+.| |.....+ ...+...||+.|+-| |-..||++.+.
T Consensus 80 ~vFYFaPk~~W~L~yQwg~-----~~fsY~Ts~DptnpngWSapq~lf~g~i~~~~~g~iD~~vI~D-~~n~yLFfa~D- 152 (271)
T PF03664_consen 80 QVFYFAPKNIWYLAYQWGP-----AAFSYSTSSDPTNPNGWSAPQPLFSGSISGSGTGPIDQWVICD-DTNMYLFFAGD- 152 (271)
T ss_pred eEEEecCCcEEEEEEecCC-----CcceeecCCCCCCCccCCCCcccccccccCCCCCceeeEEEec-CCceEEEEcCC-
Confidence 9998778899999987532 33457788888876 6543222 112345799999865 55799999865
Q ss_pred CCcEEEEEcCC-CCCCccc-cEEEee---cCceeeeeEEEEEC--CEEEEEEeCCCCCCCCcEEEEEeCCCCCCceeCC-
Q 012453 300 NSELHIGPLTS-DYLDVSN-VVRRIL---VGQHREAPALFKHL--GTYYMVTSGCTGWAPNEALVHAAESIMGPWEDMG- 371 (463)
Q Consensus 300 n~~i~ia~Ls~-D~~~~~g-~~~~i~---~~~~~EgP~vfK~~--G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~~g- 371 (463)
|+.|+-+++.- +.-.--| ....++ ....+||+.|+|.+ ++|.|+..+- |-...|-.-.+|.++.|||+.+.
T Consensus 153 nGkiYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~G~~~YLmiVEai-Gs~gRyFRSfTa~sL~G~Wtp~A~ 231 (271)
T PF03664_consen 153 NGKIYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVKGQNQYLMIVEAI-GSDGRYFRSFTATSLDGPWTPQAA 231 (271)
T ss_pred CCcEEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEcCCceEEEEEEEe-cCCCcEEEeeecCCCCCcceeccc
Confidence 67788776642 2221123 233333 24689999999984 5787877532 21223444458999999999873
Q ss_pred ---Ccccc
Q 012453 372 ---NPCIG 376 (463)
Q Consensus 372 ---~Pv~~ 376 (463)
+|..+
T Consensus 232 tEsnPFAg 239 (271)
T PF03664_consen 232 TESNPFAG 239 (271)
T ss_pred cccCCccc
Confidence 45544
No 66
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=98.79 E-value=1.4e-07 Score=100.04 Aligned_cols=203 Identities=16% Similarity=0.107 Sum_probs=116.4
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCC-CccCCC---cee
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPM-KDNGND---SFY 130 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~-a~~~~~---~~~ 130 (463)
.-|..|+||+||++.+.||.|- .+.. +...|++-+-.- +..++++|| +.. +..+ ...... ..+
T Consensus 40 Wgha~S~Dlv~W~~~~~aL~P~------~~~d-~~g~~sGsav~~---~~~~~~~YT-g~~--~~~~~~~~~~~~~~~~a 106 (437)
T smart00640 40 WGHAVSKDLVHWTHLPVALAPD------EWYD-SNGVFSGSAVID---PGNLSLLYT-GNV--AIDTNVQVQRQAQQLAA 106 (437)
T ss_pred EEEEEcCCcceeeecCcccCCC------CcCC-CCcEEEEEEEEC---CCceEEEEc-CCc--ccccccCcccEEEEEEE
Confidence 6789999999999999999664 1223 234777754332 223555665 211 1111 001001 011
Q ss_pred -eecCceeeCCCCCeEEe----------eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCC
Q 012453 131 -YYPGRIWLDTEGAPIQA----------HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTW 199 (463)
Q Consensus 131 -i~pg~~w~dt~Gnpi~a----------hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W 199 (463)
-..+..|....+|||.. +||.|.++++ ++|||+-...... ....+.+|+|+||.+|
T Consensus 107 ss~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~-~~~~m~~g~~~~~------------~~G~i~ly~S~Dl~~W 173 (437)
T smart00640 107 SDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDG-DKWYMVIGASDED------------KTGIALLYRSTDLKNW 173 (437)
T ss_pred ECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECC-CEEEEEEEEEecC------------CCeEEEEEECCCcccC
Confidence 12566777666678764 4688887653 6899875532100 0123889999999999
Q ss_pred EEeceecccCCcccccccCCCCeeeeceEEEEccCC-----EEEEEEEEeCCCCCcceEEEEEeCCCCCCceecccc---
Q 012453 200 KNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTG-----KYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSK--- 271 (463)
Q Consensus 200 ~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~G-----kYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~--- 271 (463)
+..+.++..... + .+.+.+.|+++. -++ +++|.++..........+|....+ ..|+.....
T Consensus 174 ~~~~~~~~~~~~----~--~g~~wECPdlf~--l~~~~~~~~~vLi~s~~g~~~~~y~~G~~~g~---~~f~~~~~~~~~ 242 (437)
T smart00640 174 TLLGELLHSGVG----D--TGGMWECPDLFP--LPGDGDTSKHVLKVSPQGGSGNYYFVGYFDGS---DQFTPDDPEDVG 242 (437)
T ss_pred eECCcccccCCC----C--ccceEECCcEEE--eCCCCCceeEEEEECcCCCCccEEEEEEEcCc---eeEeECCccccC
Confidence 999987643111 1 135788999996 667 999999876432223445543321 246543211
Q ss_pred ----CCCCCCccCceEEEcCCC-cEEEE
Q 012453 272 ----RPHGFDSRDMTIFKDDDG-VAYLV 294 (463)
Q Consensus 272 ----~p~g~~siDp~vF~DdDG-~~YL~ 294 (463)
...|....=|..|.|++| +.+|+
T Consensus 243 ~~~~lD~G~dfYA~qt~~~~~~~r~i~~ 270 (437)
T smart00640 243 IGLRLDYGFDFYASQTFYDPDGNRRILI 270 (437)
T ss_pred ccceEecCCCceeeeeeecCCCCcEEEE
Confidence 112334444568888665 54443
No 67
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=98.66 E-value=6.2e-07 Score=95.41 Aligned_cols=209 Identities=18% Similarity=0.190 Sum_probs=122.7
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhc----CCCcccceeeeeccCCcceEEeeeCCCCccCCCCCcc-CCCce
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKR----RPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDN-GNDSF 129 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~----~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~-~~~~~ 129 (463)
.+...|+||++|+...-.|- +.+..-.|. .+..|||.|..- +-...++|+.- +-...- .+...
T Consensus 55 l~i~hS~DL~nW~~v~tpl~----~~~~ld~kgn~~~S~giWAPdl~y~---dGkfwl~ytdv-----k~~~g~~k~~~n 122 (549)
T COG3507 55 LAIHHSRDLVNWTLVSTPLI----RTSQLDLKGNFPYSGGIWAPDLSYH---DGKFWLYYTDV-----KRSGGPYKNAGN 122 (549)
T ss_pred eeeeccccccCcEEeccccc----CcchhhhhcccCCCCceeccceecC---CCcEEEEEecc-----cccCCccccccc
Confidence 45677999999998875332 222333321 357899998854 78867777511 111111 12223
Q ss_pred eee----cCceeeCCCCCeE-EeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEec-
Q 012453 130 YYY----PGRIWLDTEGAPI-QAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEG- 203 (463)
Q Consensus 130 ~i~----pg~~w~dt~Gnpi-~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g- 203 (463)
|+. +...|.|..--+. .+.||++.+|+++.+|.+++.+..+..-+ .+....+++++.+ .=+..|
T Consensus 123 yl~t~~s~~G~WsDpi~l~~~~~iDPslf~D~dGr~wlv~~~w~~~~~~~-------~~~~i~l~~~~~~---~~~l~g~ 192 (549)
T COG3507 123 YLVTAESIDGPWSDPIKLNGSNAIDPSLFFDKDGRKWLVNGSWDGGIFMH-------SFAGIILQEYDKT---TQKLVGQ 192 (549)
T ss_pred EEEEecCCCCCcccceecCCcCccCCceeecCCCCEEEEecccCCCcccc-------cccceeeeecccc---ccccCCc
Confidence 444 3456766431111 37899999999888999998875432100 0112223333332 222222
Q ss_pred ---eecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccC-------C
Q 012453 204 ---IVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKR-------P 273 (463)
Q Consensus 204 ---~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~-------p 273 (463)
.++... +....++|.+. +++|=||||.+-.......+.+.||.|++++|||++..... |
T Consensus 193 ~~~~~~~G~---------~~~~~EGPhl~--k~~gYYYL~~a~gG~t~~gh~~~vaRSKsidGPYe~~~~~pllt~~~~p 261 (549)
T COG3507 193 GYKIIFDGG---------NGGLTEGPHLY--KKTGYYYLYVAEGGLTTYGHAIRVARSKSIDGPYEDHPGNPLLTSRDNP 261 (549)
T ss_pred cceeEeccC---------CCccccCceee--ccCCEEEEEEEcCCCCccceeEEEEeccCCCCCcccCCCCeeeeecCCC
Confidence 122211 23468999554 58888888887654233468899999999999999864321 1
Q ss_pred CC--CCccCceEEEcCCCcEEEEEE
Q 012453 274 HG--FDSRDMTIFKDDDGVAYLVYS 296 (463)
Q Consensus 274 ~g--~~siDp~vF~DdDG~~YL~yg 296 (463)
.. ...-...+++.++|++|+.+.
T Consensus 262 ~~~~q~~gh~~~v~t~~g~w~~~~~ 286 (549)
T COG3507 262 ENPLQKAGHGTLVVTPTGEWYFAYL 286 (549)
T ss_pred CChhhhcCCcceEECCCCcEeeeee
Confidence 11 123345566677899999887
No 68
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=98.61 E-value=2e-06 Score=91.71 Aligned_cols=175 Identities=19% Similarity=0.272 Sum_probs=116.8
Q ss_pred CceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEE
Q 012453 150 GGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVI 229 (463)
Q Consensus 150 ~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi 229 (463)
.++++. +|+|.+|..+..- ... .+...+..+.|+||++|+..+.+|.+++. .+.+.++..+++
T Consensus 45 NG~iy~--~G~yHlFYQ~~P~---~~~------~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~------~d~~g~ySGSAV 107 (486)
T COG1621 45 NGLIYF--DGKYHLFYQYNPF---GAA------HGPKHWGHAVSKDLVHWEHLPIALAPDDD------YDSHGCYSGSAV 107 (486)
T ss_pred CceeEE--CCEEEEEEecCCC---CCC------CCCceeeeeccCCcccceECCceecCCCc------cccCCceeeeEE
Confidence 345554 4899999887531 111 12356788899999999999998876542 245678999999
Q ss_pred EEccCCEEEEEEEEe--CCCC-CcceEEEEEeCCCCCCceec-cc---cCCCC--CCccCceEEEcCCCcEEEEEEecCC
Q 012453 230 YNDRTGKYVMWMHID--DCNY-TKAAVGVAISDYPTGPFDYL-YS---KRPHG--FDSRDMTIFKDDDGVAYLVYSSEDN 300 (463)
Q Consensus 230 ~n~~~GkYymy~s~~--~~~~-~~~~IgVA~SdsP~GPf~~~-~~---~~p~g--~~siDp~vF~DdDG~~YL~yg~~~n 300 (463)
- .+|+=.++|+.. +.+. ....-.+|.|++ .|.|+.. +. ..|.+ ...+||-||.+++|+.||+-+..+.
T Consensus 108 ~--~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~d-g~~f~K~~~~~i~~~p~~~t~hFRDPKv~w~~~~~~~~mlgAq~~ 184 (486)
T COG1621 108 V--DDGNLSLFYTGNVRDSNGIRQQTQCIAYSED-GGTFEKYSGNPIIDQPEGYTPHFRDPKVVWDEGGKWWMMLGAQGE 184 (486)
T ss_pred E--eCCcEEEEEccceeccCCcceeEEEEEEEcC-CCceEeccCCceecCCCcccccCCCCcccccCCCcEEEEEEEecC
Confidence 6 566666666643 2222 234567899988 6778873 32 13444 4789999999999999999998643
Q ss_pred C---cEEEEEcCCCCCCcc--ccEEEe--ecCceeeeeEEEEECCEEEEEEe
Q 012453 301 S---ELHIGPLTSDYLDVS--NVVRRI--LVGQHREAPALFKHLGTYYMVTS 345 (463)
Q Consensus 301 ~---~i~ia~Ls~D~~~~~--g~~~~i--~~~~~~EgP~vfK~~G~YYL~yS 345 (463)
. .+.+.+ ++|+.++. |+...- ..+...|+|-+|.-.+.=.++++
T Consensus 185 ~~~g~i~lY~-S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~~~~~~~ 235 (486)
T COG1621 185 DLKGTILLYE-SDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGEDVLLFW 235 (486)
T ss_pred CCCceEEEEe-CCCccCcEEEEeeccCCCceeeEEECCCeEEecCcCceEEc
Confidence 2 355555 56776654 332111 11235999999998887555554
No 69
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.57 E-value=2.6e-06 Score=84.30 Aligned_cols=137 Identities=19% Similarity=0.291 Sum_probs=85.8
Q ss_pred ceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccc--cCC--C----CCCccCceEEEcCCCcEEEEEEe
Q 012453 226 PKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYS--KRP--H----GFDSRDMTIFKDDDGVAYLVYSS 297 (463)
Q Consensus 226 P~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~--~~p--~----g~~siDp~vF~DdDG~~YL~yg~ 297 (463)
|.|++ .+|+|||+|.+...+ ....||+|+|++- -.|+.... ..| . .....||.|++. ||++||+|.+
T Consensus 3 P~v~~--~~G~y~l~y~~~~~~-~~~~ig~A~S~Dg-~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~~-~g~y~m~Yta 77 (268)
T cd08993 3 PAVVY--DNGEFYLLYRAAGND-GVIRLGLARSRDG-LHFEIDPDPPVWPPPEDGFEEGGVEDPRIVKI-DDTYYITYAA 77 (268)
T ss_pred CeEEE--ECCEEEEEEEEECCC-CceEEEEEEECCC-ceEEECCcceEcCCCCCcccccCccCcEEEEE-CCEEEEEEEc
Confidence 77886 799999999986544 3578999999883 25776432 112 1 134679999984 7799999987
Q ss_pred cC----CCcEEEEEcCCCCCCccccEEEeecCceeeeeEEE--EECCEEEEEEeCCCCC-CCCcEEE-EEeCCCCCCcee
Q 012453 298 ED----NSELHIGPLTSDYLDVSNVVRRILVGQHREAPALF--KHLGTYYMVTSGCTGW-APNEALV-HAAESIMGPWED 369 (463)
Q Consensus 298 ~~----n~~i~ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vf--K~~G~YYL~yS~~tg~-~~n~~v~-~~S~s~~GPw~~ 369 (463)
.. ...|.+++ ++|+.+++-... +... ....+.+| |.+|+|||+|+...+. ...+.++ +.|+++. -|+.
T Consensus 78 ~~~~~~~~~i~lA~-S~D~~~W~~~~~-~~~~-~~~d~~~~p~~~~g~y~m~~r~~~~~~~~~~~I~lA~S~Dl~-~W~~ 153 (268)
T cd08993 78 RPNAPNGTRIGLAT-TKDFITFERLGT-SLVP-NNRDGILFPEKINGKYVMLHRPFEYGGTSPPDMWLSFSPDLV-HWGN 153 (268)
T ss_pred cCCCCCCcEEEEEE-eCCcceEEEecc-cCCC-CCCCEEEeeEEECCEEEEEEccccCCCCCCCcEEEEECCCcC-ccCC
Confidence 53 23466665 466766543211 1111 11235666 4699999999643211 1234555 4688876 5876
Q ss_pred CC
Q 012453 370 MG 371 (463)
Q Consensus 370 ~g 371 (463)
.+
T Consensus 154 ~~ 155 (268)
T cd08993 154 HR 155 (268)
T ss_pred Ce
Confidence 54
No 70
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.52 E-value=1.5e-05 Score=81.23 Aligned_cols=205 Identities=16% Similarity=0.153 Sum_probs=119.2
Q ss_pred cEEEEEeCCCCCCEEece-ecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCc
Q 012453 187 GVGCYSSKDMWTWKNEGI-VLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPF 265 (463)
Q Consensus 187 gi~v~sS~DLv~W~~~g~-vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf 265 (463)
.|.+..|+|.++|+.... +|.+.. .+ ....++-|-|++ .+++|||+|++.+.. ..++++|+|++-. -|
T Consensus 61 ~iglA~S~DGi~f~~~~~pil~P~~-~~-----e~~GvEDPRVt~--i~d~yymtYta~~~~--~~~~~la~s~D~~-~~ 129 (312)
T PF04041_consen 61 RIGLARSDDGIHFERDPEPILYPDT-DY-----EEWGVEDPRVTK--IDDTYYMTYTAYSGK--GPRIGLATSKDFK-HW 129 (312)
T ss_dssp EEEEEEESSSSS-EE-SS-SBEE-S-ST-----THTEEEEEEEEE--ETTEEEEEEEEEESS--SEEEEEEEESSSS-SE
T ss_pred EEEEEEccCCcCceECCCCEEccCC-CC-----cccCccceeEEE--ECCEEEEEEEEecCC--CcccceEEccchH-hh
Confidence 588999999999998753 443332 11 234689999997 889999999987543 5789999998854 47
Q ss_pred eeccccCCCC--------CCccCceEEEcC-CCcEEEEEEecCCCcEEEEEcCCCCCCccccEEEeec-------Cceee
Q 012453 266 DYLYSKRPHG--------FDSRDMTIFKDD-DGVAYLVYSSEDNSELHIGPLTSDYLDVSNVVRRILV-------GQHRE 329 (463)
Q Consensus 266 ~~~~~~~p~g--------~~siDp~vF~Dd-DG~~YL~yg~~~n~~i~ia~Ls~D~~~~~g~~~~i~~-------~~~~E 329 (463)
+..+...+.. ...-|..+|-.. +|+++|++. ...|+++.- +|++.+......+.. ...++
T Consensus 130 ~r~g~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r---~~~i~la~S-~Dl~~W~~~~~~~~~~~~~~~d~~kiG 205 (312)
T PF04041_consen 130 ERHGKIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR---DPSIWLAYS-PDLIHWGNHREPLLSPRPGWWDSSKIG 205 (312)
T ss_dssp EEEECTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE---SSSBEEEEE-SSSSSEEEEBETSB--STTSSCSSEEE
T ss_pred EEeccccCcccccccccccccCceEEEEEEECCEEEEEEC---CCCEEEEec-CCcccccccccccccCCCCcChhhccc
Confidence 7665322211 134788888763 899999888 467888875 888776543321221 12333
Q ss_pred -eeEEEEECCEEEEEEeC-CCCCCCCcEEEEEeCCCCCCcee---CCCccccCCcccceeccCCCce----EEEcccCCc
Q 012453 330 -APALFKHLGTYYMVTSG-CTGWAPNEALVHAAESIMGPWED---MGNPCIGGNKVFRLTTFFAQST----YVIPLAGLP 400 (463)
Q Consensus 330 -gP~vfK~~G~YYL~yS~-~tg~~~n~~v~~~S~s~~GPw~~---~g~Pv~~~~~~~~~~t~~sq~~----~V~~~~G~~ 400 (463)
||--+|-+.-|.++|-+ .+.....|.+++.==+...|.+- ..+|++.........+.-.+-- .++..+|
T Consensus 206 ~g~pPi~t~~GwL~iyHG~~~~~~~~Y~~g~~LlD~~dP~kvi~r~~~pil~P~~~~E~~G~v~nVVF~~g~~~~~~~-- 283 (312)
T PF04041_consen 206 AGPPPIKTDEGWLLIYHGNVTDEGRVYRLGAALLDLDDPTKVIARSPEPILEPEEPYERYGDVPNVVFPCGGLVDDDG-- 283 (312)
T ss_dssp E-S-EEEETTEEEEEEEEEESSTTTEEEEEEEEE-SSSTTSEEEEBSS-SB-S-SHHHHSSSSTTBEEEEEEEEEETT--
T ss_pred CCCCceEecCCEEEEEeccccCCCCEEEEEEEEEcCCCCcceEECCCCceEcCCCccccccccCCEEEECCCEEccCC--
Confidence 36666664447777764 23334457776543344455443 2467776542211122222211 1233333
Q ss_pred ccEEEEEe
Q 012453 401 GLYIFMAD 408 (463)
Q Consensus 401 ~~yi~~~d 408 (463)
+++|+|+-
T Consensus 284 ~~~iyYG~ 291 (312)
T PF04041_consen 284 RLLIYYGA 291 (312)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEee
Confidence 68888874
No 71
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=97.92 E-value=0.00053 Score=68.61 Aligned_cols=165 Identities=13% Similarity=0.121 Sum_probs=90.5
Q ss_pred hhhhhhccccCCC-CCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCC---CccCCCCCcc-CCCceeeecCcee
Q 012453 63 LVEVEEENIQIPP-PRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDM---KTAIDPMKDN-GNDSFYYYPGRIW 137 (463)
Q Consensus 63 l~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~---~t~~dp~a~~-~~~~~~i~pg~~w 137 (463)
|.+|++.+.|+.- ++ +.... ...|||.|-.|.- +...++.|.-.+ .|..||+.-- -....-++.|..
T Consensus 55 f~~Ws~~g~A~q~~l~----~~~~~--~~fwAPqVfyf~p-k~kwYL~Yq~~~~~yaTs~dp~~P~~ws~~qpl~~~~~- 126 (303)
T cd08987 55 FTDWSQAASATQYYLQ----NGNMT--GYRVAPQVFYFAP-QNKWYLIYQWWPAAYSTNSDISNPNGWSAPQPLFSGTP- 126 (303)
T ss_pred ccCHhHhccchhhccc----CCCCC--cccccCEEeeecc-CCEEEEEEecCceEEEeCCCCCCCCccCCCcccccCcc-
Confidence 9999999977741 11 11222 2489999998843 345566666211 0122333211 001111221111
Q ss_pred eCCCCCeEEeeCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEe-CCCCCCEEe---ceecccCCccc
Q 012453 138 LDTEGAPIQAHGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSS-KDMWTWKNE---GIVLAAEETNE 213 (463)
Q Consensus 138 ~dt~Gnpi~ahd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS-~DLv~W~~~---g~vL~~~~~~~ 213 (463)
.+....+| |..|+- ++++.|||-..+++ .||.| ..+.|.... ..++...+
T Consensus 127 ~~~~~~~I---D~~vI~--Dd~~~YLff~~dnG------------------~iyra~~~~~nFp~~~~~~~~~~~~~--- 180 (303)
T cd08987 127 NGSPGGWI---DFWVIC--DDTNCYLFFSDDNG------------------KLYRSSTTLGNFPNGGTETVIIMSDS--- 180 (303)
T ss_pred cCCCCCcc---ceeEEe--CCCCEEEEEecCCC------------------eEEEEecchhhCCCCCCccEEEecCC---
Confidence 01112223 556643 36899999765432 24443 333333221 11111111
Q ss_pred ccccCCCCeeeeceEEEEccCC--EEEEEEEEeCCCCCcceEEEEEeCCCCCCceec
Q 012453 214 THDLYKLNVLERPKVIYNDRTG--KYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYL 268 (463)
Q Consensus 214 ~~~~~~~~~iWAP~vi~n~~~G--kYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~ 268 (463)
...+.++||.|.. .+| +|+|.+.+.+.+..+...+ +||+++.|||+..
T Consensus 181 ----~~~~lfEa~~Vyk--v~G~~~YlmiveA~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 181 ----NKNNLFEASNVYK--VKGQNQYLLIVEAIGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred ----CccccceeeEEEE--ECCCeEEEEEEEecCCCCCCeEEE-EEcCCCCCCceec
Confidence 1246799999996 566 9999999987643456666 9999999999986
No 72
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=97.88 E-value=0.00056 Score=73.25 Aligned_cols=205 Identities=18% Similarity=0.208 Sum_probs=108.8
Q ss_pred eCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccceeeeeccCCcceEEeeeCCCCccCCCCCccCCCceeee--
Q 012453 55 SHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDNGNDSFYYY-- 132 (463)
Q Consensus 55 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~~~~~~~i~-- 132 (463)
=-|..|.||+|||.+++||=|- .|.++ +..+.= .+..+ +..+..+|+ |+..+... .......|-
T Consensus 72 WgHa~S~Dlv~W~~~piaL~Pd------~~~d~-~g~ySG--SAV~~-~~~l~lfyt---g~v~~~~~-~r~~~Q~iA~s 137 (486)
T COG1621 72 WGHAVSKDLVHWEHLPIALAPD------DDYDS-HGCYSG--SAVVD-DGNLSLFYT---GNVRDSNG-IRQQTQCIAYS 137 (486)
T ss_pred eeeeccCCcccceECCceecCC------Ccccc-CCceee--eEEEe-CCcEEEEEc---cceeccCC-cceeEEEEEEE
Confidence 3578999999999999999664 44442 222221 11111 444466666 22222221 111111111
Q ss_pred -cCceeeCCCCCeEEe---------eCCceEEECCCCEEEEE-EEecCCCCcccccccceeeccCcEEEEEeCCCCCCEE
Q 012453 133 -PGRIWLDTEGAPIQA---------HGGGILYDERSRTYFWY-GEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKN 201 (463)
Q Consensus 133 -pg~~w~dt~Gnpi~a---------hd~~I~~~~~~g~YYly-gT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~ 201 (463)
.+..+.--.||||.. +||.++.++ ++++|++ |--... ....|.+|+|.||.+|+.
T Consensus 138 ~dg~~f~K~~~~~i~~~p~~~t~hFRDPKv~w~~-~~~~~~mlgAq~~~-------------~~g~i~lY~S~DL~~W~~ 203 (486)
T COG1621 138 EDGGTFEKYSGNPIIDQPEGYTPHFRDPKVVWDE-GGKWWMMLGAQGED-------------LKGTILLYESDDLKNWQF 203 (486)
T ss_pred cCCCceEeccCCceecCCCcccccCCCCcccccC-CCcEEEEEEEecCC-------------CCceEEEEeCCCccCcEE
Confidence 122221113455542 488877765 4556654 432211 012488999999999999
Q ss_pred eceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEE-----EeCCCC-CcceEEEEEeC-CCCCCceeccc-c--
Q 012453 202 EGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMH-----IDDCNY-TKAAVGVAISD-YPTGPFDYLYS-K-- 271 (463)
Q Consensus 202 ~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s-----~~~~~~-~~~~IgVA~Sd-sP~GPf~~~~~-~-- 271 (463)
.|........ .+.+.+.|+++. -.++=.++++ .....+ +....++.+.+ ++ ..|+.... +
T Consensus 204 ~g~~~~~~~~-------~gym~ECPdlf~--l~~~~~~~~~pqg~~~~~~~~~n~~~~~Y~vG~~dg-~~f~~~~~~~~~ 273 (486)
T COG1621 204 TGEFGLEQGG-------LGYMWECPDLFE--LDGEDVLLFWPQGLSINGGEYDNIYQSGYFVGDFDG-KEFKLDDGQFRE 273 (486)
T ss_pred EEeeccCCCc-------eeeEEECCCeEE--ecCcCceEEcceeeecCCCcCCCcceeEEEEEeecc-ceeEecCCCcee
Confidence 9987654111 245688999996 5555333332 222222 23445666665 32 22333222 1
Q ss_pred CCCCCCccCceEEEcCCCcEEE-EEEe
Q 012453 272 RPHGFDSRDMTIFKDDDGVAYL-VYSS 297 (463)
Q Consensus 272 ~p~g~~siDp~vF~DdDG~~YL-~yg~ 297 (463)
...|....=|..|.|+||+.++ -|.+
T Consensus 274 LD~G~DfYApQtf~~~dgrri~igWmg 300 (486)
T COG1621 274 LDFGFDFYAPQTFLDPDGRRILIGWMG 300 (486)
T ss_pred cccCccccceeeccCCCCCEEEEEecc
Confidence 2346667778889888888544 4444
No 73
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=97.22 E-value=0.0041 Score=66.01 Aligned_cols=160 Identities=18% Similarity=0.122 Sum_probs=99.0
Q ss_pred CCEEEEEEEecC-CCCcccccccceeeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEEEccCCE
Q 012453 158 SRTYFWYGEYKD-GPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGK 236 (463)
Q Consensus 158 ~g~YYlygT~~~-g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~Gk 236 (463)
+|.|.+|-.+.. +.. | +-.-+....|+||+||+....++.+.+ | .+-+.+|..++..+ .+|+
T Consensus 69 kG~yHLFyQyNP~gav----w------g~ivWGHavSkDLinW~~lp~Ai~Ps~--~----~ding~wSGSati~-~~~~ 131 (571)
T KOG0228|consen 69 KGKYHLFYQYNPKGAV----W------GNIVWGHAVSKDLINWEALPPAIAPSE--W----FDINGCWSGSATID-PNNS 131 (571)
T ss_pred CcEEEEEEecCCCCce----e------eeeEeeeecchhhccccccCcccCCCC--c----cccCccccceEEEc-cCCC
Confidence 489999987643 222 1 123466778999999999998887543 1 13467899999984 6777
Q ss_pred EEEEEEEeCCCCCcceEEEEEeCCCCCC------------ceecccc-CCCCCCccCceEEEc-CCCcEEEEEEecC-CC
Q 012453 237 YVMWMHIDDCNYTKAAVGVAISDYPTGP------------FDYLYSK-RPHGFDSRDMTIFKD-DDGVAYLVYSSED-NS 301 (463)
Q Consensus 237 Yymy~s~~~~~~~~~~IgVA~SdsP~GP------------f~~~~~~-~p~g~~siDp~vF~D-dDG~~YL~yg~~~-n~ 301 (463)
=.++|+..+.+. .+-.-+|.-.++..| |...... ..+....+||+++.. +||++-|+-++-. ..
T Consensus 132 ~vilytg~d~~~-rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~ 210 (571)
T KOG0228|consen 132 PVILYTGIDPNN-RQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQR 210 (571)
T ss_pred eEEEecccCcCc-eEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCCcEEEEEEeecCcc
Confidence 777777654431 222223333333333 3221110 112346799999987 6999999888752 22
Q ss_pred cEEEEEcCCCCCCccccEEEee---cCceeeeeEEEE
Q 012453 302 ELHIGPLTSDYLDVSNVVRRIL---VGQHREAPALFK 335 (463)
Q Consensus 302 ~i~ia~Ls~D~~~~~g~~~~i~---~~~~~EgP~vfK 335 (463)
.+.+.--+.|+..++.....+. .+...|.|-+|.
T Consensus 211 g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffp 247 (571)
T KOG0228|consen 211 GKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFP 247 (571)
T ss_pred ceEEEEeccchhhhhcccccccccCccceEECCCcEE
Confidence 3444445788888876544432 235788888886
No 74
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=97.12 E-value=0.011 Score=60.37 Aligned_cols=189 Identities=15% Similarity=0.167 Sum_probs=99.5
Q ss_pred CCeeeeceEEEEccCCE--EEEEEEEeCCCCCcceEEEEEeCCCCCCceeccc--cCCC----CCCccCceEEEcCCCcE
Q 012453 220 LNVLERPKVIYNDRTGK--YVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYS--KRPH----GFDSRDMTIFKDDDGVA 291 (463)
Q Consensus 220 ~~~iWAP~vi~n~~~Gk--Yymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~--~~p~----g~~siDp~vF~DdDG~~ 291 (463)
...+.-|.++. .+|+ ++|.|-+...+....+||+|.|++.. .|+.... ..|. -.+.-||-|.+- ||++
T Consensus 29 ~~~vfNpgai~--~~~~~R~~l~yr~~~~~~~~~~iglA~S~DGi-~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~y 104 (312)
T PF04041_consen 29 PNAVFNPGAIV--FDGGLRVYLLYRAYGSDIGSSRIGLARSDDGI-HFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTY 104 (312)
T ss_dssp SSEEEEEEEEE--ETTE--EEEEEEEEESSSSEEEEEEEEESSSS-S-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEE
T ss_pred cceEEcCcEEE--ECCeeEEEEEEEeECCCCceeEEEEEEccCCc-CceECCCCEEccCCCCcccCccceeEEEE-CCEE
Confidence 35678888885 4555 88877665544334589999999875 4665432 1111 135679999986 4689
Q ss_pred EEEEEecCCC--cEEEEEcCCCCCCccccEEEeecC-c----------eeeeeEEEEECCEEEEEEeCCCCCCCCcEEEE
Q 012453 292 YLVYSSEDNS--ELHIGPLTSDYLDVSNVVRRILVG-Q----------HREAPALFKHLGTYYMVTSGCTGWAPNEALVH 358 (463)
Q Consensus 292 YL~yg~~~n~--~i~ia~Ls~D~~~~~g~~~~i~~~-~----------~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~ 358 (463)
||.|.+.+.. .+.++ .+.|..+++-.- .++.. . -.-+-+.-|.||+|+|++-. + ....+
T Consensus 105 ymtYta~~~~~~~~~la-~s~D~~~~~r~g-~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r~-----~-~i~la 176 (312)
T PF04041_consen 105 YMTYTAYSGKGPRIGLA-TSKDFKHWERHG-KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHRD-----P-SIWLA 176 (312)
T ss_dssp EEEEEEEESSSEEEEEE-EESSSSSEEEEE-CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEES-----S-SBEEE
T ss_pred EEEEEEecCCCcccceE-EccchHhhEEec-cccCcccccccccccccCceEEEEEEECCEEEEEECC-----C-CEEEE
Confidence 9999976433 23333 367777654211 11100 0 11122223679999999872 1 22234
Q ss_pred EeCCCCCCceeCCCccccCCcc-cc--eeccCCCceEEEcccCCcccEEEEEeEeCCCCCCCCeeEEEEEEEcC
Q 012453 359 AAESIMGPWEDMGNPCIGGNKV-FR--LTTFFAQSTYVIPLAGLPGLYIFMADRWNPADLRESRYIWLPLIVRG 429 (463)
Q Consensus 359 ~S~s~~GPw~~~g~Pv~~~~~~-~~--~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~~~~~R~v~lPi~~~~ 429 (463)
+|++.. -|+....++....+. +. ..+.++ -.+..+ ++|.+.||- +. .....+|..--+.+|.
T Consensus 177 ~S~Dl~-~W~~~~~~~~~~~~~~~d~~kiG~g~---pPi~t~--~GwL~iyHG--~~-~~~~~~Y~~g~~LlD~ 241 (312)
T PF04041_consen 177 YSPDLI-HWGNHREPLLSPRPGWWDSSKIGAGP---PPIKTD--EGWLLIYHG--NV-TDEGRVYRLGAALLDL 241 (312)
T ss_dssp EESSSS-SEEEEBETSB--STTSSCSSEEEE-S----EEEET--TEEEEEEEE--EE-SSTTTEEEEEEEEE-S
T ss_pred ecCCcc-cccccccccccCCCCcChhhcccCCC---CceEec--CCEEEEEec--cc-cCCCCEEEEEEEEEcC
Confidence 677765 488765544433211 00 111211 223322 368878873 11 1344566554444544
No 75
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=96.85 E-value=0.0057 Score=64.31 Aligned_cols=187 Identities=16% Similarity=0.220 Sum_probs=96.7
Q ss_pred chhhhhhccccCCCCCC--CCCChhhhcCCCcccceeeeeccC-CcceEEeeeCCCCccCCCCC--cc----------CC
Q 012453 62 ELVEVEEENIQIPPPRG--KRSPRAAKRRPKRTTTLIDEFLDE-NSQLRHVFFPDMKTAIDPMK--DN----------GN 126 (463)
Q Consensus 62 ~l~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~v~~f~~~-~~~v~~~~~p~~~t~~dp~a--~~----------~~ 126 (463)
++-+|...|-.+|..-. -.+-.|. = ...+.+ +..|++.||- -++...|+. .. -+
T Consensus 109 ~~~~W~~~G~vf~~g~~~~~~s~EWS--------G--SA~l~~~dg~I~LfYTa-v~~~~~~~~~Q~l~t~~~g~~~~d~ 177 (428)
T PF02435_consen 109 ANDGWKNGGPVFPEGASFVPGSREWS--------G--SATLNNDDGSIQLFYTA-VGFSDTPTFRQRLATATLGLIHADD 177 (428)
T ss_dssp SGGG-EEEEESS-TTCCCCGCEEEEE--------E--EEEESTTTSEEEEEEEE-EEEETTTTTEEEEEEEEEEEEEECS
T ss_pred ccCCceECcccCCCCCCCCccCcEec--------C--ceEEcCCCCeEEEEEee-cccCCCcchhhhhhhHhcCeeecCC
Confidence 47799999988887632 1122333 2 333333 7787888871 001113331 10 11
Q ss_pred Cceeee---cCceeeCCCCCeEEe---------eCCceEEECCCCEEEEEEEecCCCCcccccccce-------------
Q 012453 127 DSFYYY---PGRIWLDTEGAPIQA---------HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAA------------- 181 (463)
Q Consensus 127 ~~~~i~---pg~~w~dt~Gnpi~a---------hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~------------- 181 (463)
+.++|. .-+..+..||..-+. +||.++.++.+|+-||+=+...+......-+|..
T Consensus 178 ~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~ 257 (428)
T PF02435_consen 178 DGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLEN 257 (428)
T ss_dssp TEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHH
T ss_pred CceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccc
Confidence 122222 112233445554432 6999999977788887766543322110011100
Q ss_pred ---------eeccCcEEEEEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCC----
Q 012453 182 ---------RVDIIGVGCYSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNY---- 248 (463)
Q Consensus 182 ---------~~~~~gi~v~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~---- 248 (463)
.....||.....+++..|+....+|....+ ...+++|.|+. ++||||||..+....+
T Consensus 258 ~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v--------~de~ERP~iv~--~~gkyYLFt~s~~~~~a~g~ 327 (428)
T PF02435_consen 258 NDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGV--------NDELERPHIVF--MNGKYYLFTISHLSTFADGI 327 (428)
T ss_dssp SCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTT--------BS-EEEEEEEE--ETTEEEEEEEEEGGGBSTTH
T ss_pred cccccccceecceeeeEEecCCCCCccEEeCcceecccc--------cccccCCcEEE--ECCEEEEEEEeccccccCCc
Confidence 112234444444455679988877765432 46799999996 9999999998763211
Q ss_pred --CcceEEEEEeCCCCCCceecc
Q 012453 249 --TKAAVGVAISDYPTGPFDYLY 269 (463)
Q Consensus 249 --~~~~IgVA~SdsP~GPf~~~~ 269 (463)
.....|..++++..|||+++.
T Consensus 328 ~g~d~~yg~~~~~~L~g~y~PLN 350 (428)
T PF02435_consen 328 VGPDGVYGFVVSDSLRGPYKPLN 350 (428)
T ss_dssp HTTSEEEEEEEESSTTS--EEGC
T ss_pred cCCCeEEEEEECccccCCceecC
Confidence 122334444555999999875
No 76
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=96.33 E-value=0.17 Score=51.10 Aligned_cols=179 Identities=14% Similarity=0.094 Sum_probs=108.3
Q ss_pred CcEEEEEeCCCCC-CEEece--ecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCC
Q 012453 186 IGVGCYSSKDMWT-WKNEGI--VLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPT 262 (463)
Q Consensus 186 ~gi~v~sS~DLv~-W~~~g~--vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~ 262 (463)
..+.+..|+|+.+ |+.+.. ..+... ...--.++-|-|.+ .+|+|+|-|++.+. .+.++++|++.+-.
T Consensus 61 s~l~ia~s~dgi~~~~~e~ep~~~P~~~------~~e~~G~EDPRvt~--I~~~y~mtYTa~s~--~g~~~~la~t~~f~ 130 (314)
T COG2152 61 SHLRIARSDDGIGEFEIEPEPTLWPANY------PYEIYGIEDPRVTK--IGGRYYMTYTAYSD--KGPRLALAVTKDFL 130 (314)
T ss_pred eEEEEEecccCCCceecCCcceEecCCC------chhhhcccCceEEE--ECCEEEEEEEecCC--CCcccchhhhhhhh
Confidence 4588899999999 997653 233111 11234578999997 89999999998643 35778889888865
Q ss_pred CCceeccccCCCCCCccCceEEEc-CCCcEEEEEEec----C-CCcEEEEEcCCCCCCccccEEEeecC--------cee
Q 012453 263 GPFDYLYSKRPHGFDSRDMTIFKD-DDGVAYLVYSSE----D-NSELHIGPLTSDYLDVSNVVRRILVG--------QHR 328 (463)
Q Consensus 263 GPf~~~~~~~p~g~~siDp~vF~D-dDG~~YL~yg~~----~-n~~i~ia~Ls~D~~~~~g~~~~i~~~--------~~~ 328 (463)
. |+..+...+. ...|..+|-- -+|++.|+..-- . ..+++++- ++||..+......+... ..-
T Consensus 131 n-~~rig~i~~p--dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~niwia~-S~dl~~w~~~~~~l~~~~~~~~d~~KIG 206 (314)
T COG2152 131 N-WERIGAIFPP--DNKDAALFPKKINGKYALLHRPVLGEYGMKGNIWIAF-SPDLEHWGIHRKLLGPRMGGWWDELKIG 206 (314)
T ss_pred h-hhhcccccCC--CCCCceEeeEEecCcEEEEEeecccccCccCceEEEE-cCCccCCCccceeeccccCCcchhhhcc
Confidence 4 8877655443 5678787754 378877775421 1 24677665 68887765544433221 112
Q ss_pred eeeEEEEECCEEEEEEeCCCCCCCCcEEEEEeCCCCCCceeC---CCccccCC
Q 012453 329 EAPALFKHLGTYYMVTSGCTGWAPNEALVHAAESIMGPWEDM---GNPCIGGN 378 (463)
Q Consensus 329 EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~~---g~Pv~~~~ 378 (463)
=||.-+|-..-+-++|-+.+.....|.++++==++.+|..-. .+++++..
T Consensus 207 ~g~~Pikt~egwLvlyHgv~~~~~~Yr~GaALlDledp~kvl~rS~~~IleP~ 259 (314)
T COG2152 207 WGTPPIKTEEGWLVLYHGVDETLTVYRLGAALLDLEDPTKVLARSPEYILEPE 259 (314)
T ss_pred CCCCCcCcccceEEEEeeccCccceEEeeeEEEcCCCCcEEEecCCccccCcc
Confidence 244455543335556653322111366665544666776543 45777654
No 77
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=96.32 E-value=0.025 Score=60.22 Aligned_cols=140 Identities=16% Similarity=0.126 Sum_probs=79.5
Q ss_pred eeCCccccchhhhhhccccCCCCCCCCCChhhhcCCCcccc-----------eeeeeccCCcceEEeeeCCCCccCCCCC
Q 012453 54 ISHNPSFRELVEVEEENIQIPPPRGKRSPRAAKRRPKRTTT-----------LIDEFLDENSQLRHVFFPDMKTAIDPMK 122 (463)
Q Consensus 54 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~v~~f~~~~~~v~~~~~p~~~t~~dp~a 122 (463)
+=-|..|.||++||....||=|- +|.. -+..|.= ++.+-.+++...-..|+ .+....||-.
T Consensus 89 vWGHavSkDLinW~~lp~Ai~Ps------~~~d-ing~wSGSati~~~~~~vilytg~d~~~rqVqn~a-~p~d~sdp~l 160 (571)
T KOG0228|consen 89 VWGHAVSKDLINWEALPPAIAPS------EWFD-INGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYA-YPKDVSDPQL 160 (571)
T ss_pred EeeeecchhhccccccCcccCCC------Cccc-cCccccceEEEccCCCeEEEecccCcCceEEEEEe-ccCCCCchhh
Confidence 45689999999999999999664 4544 2333322 11111122222222222 1223344444
Q ss_pred ccCCCceeeecCceeeCCCCCeEEe------------eCCceEEECCCCEEEEEEEecCCCCcccccccceeeccCcEEE
Q 012453 123 DNGNDSFYYYPGRIWLDTEGAPIQA------------HGGGILYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGC 190 (463)
Q Consensus 123 ~~~~~~~~i~pg~~w~dt~Gnpi~a------------hd~~I~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v 190 (463)
.. |.-..|||+.. +||......++|+|=|..-.+... -..+-+
T Consensus 161 ~~------------w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q-------------~g~a~~ 215 (571)
T KOG0228|consen 161 IA------------WSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQ-------------RGKAII 215 (571)
T ss_pred he------------eecCCCceeeccccccCCChhhccCCceeeecCCCcEEEEEEeecCc-------------cceEEE
Confidence 32 33333444432 688888777778777765433211 124678
Q ss_pred EEeCCCCCCEEeceecccCCcccccccCCCCeeeeceEEEEccC
Q 012453 191 YSSKDMWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRT 234 (463)
Q Consensus 191 ~sS~DLv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~ 234 (463)
|+|+|+++|+....-+...+ .+++-+.|+.+.-..+
T Consensus 216 Y~S~Df~~W~k~~~~~h~~~--------~tgmwECPdffpVs~t 251 (571)
T KOG0228|consen 216 YSSDDFKHWTKSSVPLHSGD--------LTGMWECPDFFPVSIT 251 (571)
T ss_pred EeccchhhhhcccccccccC--------ccceEECCCcEEeccc
Confidence 99999999999887666442 2456678888754433
No 78
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=95.56 E-value=2.6 Score=41.15 Aligned_cols=196 Identities=15% Similarity=0.093 Sum_probs=109.2
Q ss_pred eCCceEEECCCCEEEEEEEec-CCCCcccccccceeeccCcEEEEEeCC-CCCCEEeceecccCCcccccccCCCCeeee
Q 012453 148 HGGGILYDERSRTYFWYGEYK-DGPTYHAHKKAAARVDIIGVGCYSSKD-MWTWKNEGIVLAAEETNETHDLYKLNVLER 225 (463)
Q Consensus 148 hd~~I~~~~~~g~YYlygT~~-~g~~~~~~~~g~~~~~~~gi~v~sS~D-Lv~W~~~g~vL~~~~~~~~~~~~~~~~iWA 225 (463)
.+|.+++++ +|+.+++.+.. .... |.+ ..+..+.|+| ..+|+....+...... .......
T Consensus 49 ~~p~~~~~~-~g~l~l~~~~~~~~~~----~~~------~~~~~~~S~D~G~TWs~~~~l~~~~~~-------~~~~~~~ 110 (275)
T PF13088_consen 49 GNPSLVVDP-DGRLWLFYSAGSSGGG----WSG------SRIYYSRSTDGGKTWSEPTDLPPGWFG-------NFSGPGR 110 (275)
T ss_dssp EEEEEEEET-TSEEEEEEEEEETTES----CCT------CEEEEEEESSTTSS-EEEEEEHHHCCC-------SCEECSE
T ss_pred cCcEEEEeC-CCCEEEEEEEccCCCC----CCc------eeEEEEEECCCCCCCCCcccccccccc-------ceeccce
Confidence 456677766 78888886432 1111 111 1222355555 8999998754332110 0111222
Q ss_pred c-eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCCCCCCccCceEEEcCCCcEEEEEEecCCCcEE
Q 012453 226 P-KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDNSELH 304 (463)
Q Consensus 226 P-~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~n~~i~ 304 (463)
. -+.. .+|+.++-+.... .....+.+..|++---.|+..... +......-|+++.+.||+.++++....+..+.
T Consensus 111 ~~~i~~--~~G~l~~~~~~~~--~~~~~~~~~~S~D~G~tW~~~~~~-~~~~~~~e~~~~~~~dG~l~~~~R~~~~~~~~ 185 (275)
T PF13088_consen 111 GPPIQL--PDGRLIAPYYHES--GGSFSAFVYYSDDGGKTWSSGSPI-PDGQGECEPSIVELPDGRLLAVFRTEGNDDIY 185 (275)
T ss_dssp EEEEEE--CTTEEEEEEEEES--SCEEEEEEEEESSTTSSEEEEEEC-ECSEEEEEEEEEEETTSEEEEEEEECSSTEEE
T ss_pred eeeeEe--cCCCEEEEEeecc--ccCcceEEEEeCCCCceeeccccc-cccCCcceeEEEECCCCcEEEEEEccCCCcEE
Confidence 2 2333 5888777543322 134677888888855557765321 12235678889989999999999874234666
Q ss_pred EEEcCCCCCCccccEEEeecCceeeeeEEEE-ECCEEEEEEeCCCCCCCCcEEE-EEeCCCCCCceeC
Q 012453 305 IGPLTSDYLDVSNVVRRILVGQHREAPALFK-HLGTYYMVTSGCTGWAPNEALV-HAAESIMGPWEDM 370 (463)
Q Consensus 305 ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vfK-~~G~YYL~yS~~tg~~~n~~v~-~~S~s~~GPw~~~ 370 (463)
+++-++...++.. +..+..+....++.+++ .+|..+|++....+ ...+. +.|.+=---|+..
T Consensus 186 ~~~S~D~G~TWs~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---r~~l~l~~S~D~g~tW~~~ 249 (275)
T PF13088_consen 186 ISRSTDGGRTWSP-PQPTNLPNPNSSISLVRLSDGRLLLVYNNPDG---RSNLSLYVSEDGGKTWSRP 249 (275)
T ss_dssp EEEESSTTSS-EE-EEEEECSSCCEEEEEEECTTSEEEEEEECSST---SEEEEEEEECTTCEEEEEE
T ss_pred EEEECCCCCcCCC-ceecccCcccCCceEEEcCCCCEEEEEECCCC---CCceEEEEEeCCCCcCCcc
Confidence 7776666777754 33333334456666666 47899999983222 23333 3565543457753
No 79
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=95.36 E-value=0.97 Score=43.58 Aligned_cols=180 Identities=13% Similarity=0.185 Sum_probs=97.8
Q ss_pred CCCcccceeeeeccCCcceEEeeeCCCCccCCCCCcc----CCCceeeecCceeeCCCCCeEE-----------eeCCce
Q 012453 88 RPKRTTTLIDEFLDENSQLRHVFFPDMKTAIDPMKDN----GNDSFYYYPGRIWLDTEGAPIQ-----------AHGGGI 152 (463)
Q Consensus 88 ~~~~~~~~v~~f~~~~~~v~~~~~p~~~t~~dp~a~~----~~~~~~i~pg~~w~dt~Gnpi~-----------ahd~~I 152 (463)
....|||++... +...+..|. +.|++.. |+-++.+---..-....|+-+. +-|..+
T Consensus 67 s~liwapeih~i---ngkwyiyfa------aa~ta~~k~g~f~hrmfvlene~anpltg~w~ekgqikt~wesfsldatt 137 (324)
T COG3940 67 SNLIWAPEIHFI---NGKWYIYFA------AAPTANIKDGTFNHRMFVLENENANPLTGNWVEKGQIKTAWESFSLDATT 137 (324)
T ss_pred hhcccccceeEE---cceEEEEEe------ecCcccccccccceeEEEEecCCCCCCcccceecceeccchhcceeeeee
Confidence 357899998877 777666666 5555543 4444443321111111222221 113333
Q ss_pred EEECCCCEEEEEEEecCCCCcccccccceeeccCcEEEEEeCCCCCCEEec--eecccCCcccccccCCCCeee---ece
Q 012453 153 LYDERSRTYFWYGEYKDGPTYHAHKKAAARVDIIGVGCYSSKDMWTWKNEG--IVLAAEETNETHDLYKLNVLE---RPK 227 (463)
Q Consensus 153 ~~~~~~g~YYlygT~~~g~~~~~~~~g~~~~~~~gi~v~sS~DLv~W~~~g--~vL~~~~~~~~~~~~~~~~iW---AP~ 227 (463)
.. ..+..||+.+..+... .| ...|.+.+..+ .|+-.| +.|...+..|. -..+| .|.
T Consensus 138 fe-h~gk~yyvwaqkdp~i------~g-----nsniyiaemen--pwtikgepvmlskpe~dwe-----~~gfwvnegpa 198 (324)
T COG3940 138 FE-HNGKLYYVWAQKDPNI------KG-----NSNIYIAEMEN--PWTIKGEPVMLSKPELDWE-----IKGFWVNEGPA 198 (324)
T ss_pred ee-eCCEEEEEEeccCCCc------cC-----CcceEEEeccC--CceecCceEEecCCCcccE-----EEEEEecCCce
Confidence 33 3467888887653211 11 23466666655 477655 45555444442 22334 699
Q ss_pred EEEEccCCEEEEEEEEeCCCCCcceEEEEEeC---CCCCC--ceecccc------CCCCCCccCceEEEcCCCc-EEEEE
Q 012453 228 VIYNDRTGKYVMWMHIDDCNYTKAAVGVAISD---YPTGP--FDYLYSK------RPHGFDSRDMTIFKDDDGV-AYLVY 295 (463)
Q Consensus 228 vi~n~~~GkYymy~s~~~~~~~~~~IgVA~Sd---sP~GP--f~~~~~~------~p~g~~siDp~vF~DdDG~-~YL~y 295 (463)
|+. ++||-++-|++...+ ...|+|+..+. ++..| |+..... ....++...-++-+.+||+ --|+|
T Consensus 199 v~k--~ngkifi~ysasatd-~nycmgllwanen~dlldpaswtksptpvf~ts~en~qygpghnsftvtedgkhdvlvy 275 (324)
T COG3940 199 VLK--KNGKIFITYSASATD-VNYCMGLLWANENSDLLDPASWTKSPTPVFKTSMENHQYGPGHNSFTVTEDGKHDVLVY 275 (324)
T ss_pred EEE--ECCEEEEEEeccccc-cceeeeeeeecccCCcCCchhcccCCCcceeeehhccccCCCCCceEecCCCcccEEEE
Confidence 995 999999999987554 35789998764 34443 4432110 0011233455566678886 46777
Q ss_pred Eec
Q 012453 296 SSE 298 (463)
Q Consensus 296 g~~ 298 (463)
...
T Consensus 276 har 278 (324)
T COG3940 276 HAR 278 (324)
T ss_pred ecc
Confidence 654
No 80
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=94.58 E-value=5.7 Score=40.36 Aligned_cols=117 Identities=21% Similarity=0.307 Sum_probs=74.0
Q ss_pred eeeeceEEEEccCCEEEEEEEE-----eCCCCCcceEEEEEeCCCCCCceeccc--cCCCC-----CCccCceEEEcCCC
Q 012453 222 VLERPKVIYNDRTGKYVMWMHI-----DDCNYTKAAVGVAISDYPTGPFDYLYS--KRPHG-----FDSRDMTIFKDDDG 289 (463)
Q Consensus 222 ~iWAP~vi~n~~~GkYymy~s~-----~~~~~~~~~IgVA~SdsP~GPf~~~~~--~~p~g-----~~siDp~vF~DdDG 289 (463)
.+.-|.++. .++++.|++-+ .+.. ...++++|.|++-.+-|+.... ..|.+ ++.-||-|++= ||
T Consensus 30 ~vFNpav~~--~~~~~~~l~Rv~~~yye~~~-~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~ 105 (314)
T COG2152 30 SVFNPAVVL--VGGELLLLYRVVEGYYEDHS-SISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GG 105 (314)
T ss_pred EEecceeEE--ECCEEEEEEEEeccccccCc-cceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CC
Confidence 578899997 89999999988 3332 4688999999987665775432 23411 35679999874 68
Q ss_pred cEEEEEEecC-CCcEEEEEcCCCCCCccccEEEeecCceeeeeEE--EEECCEEEEEE
Q 012453 290 VAYLVYSSED-NSELHIGPLTSDYLDVSNVVRRILVGQHREAPAL--FKHLGTYYMVT 344 (463)
Q Consensus 290 ~~YL~yg~~~-n~~i~ia~Ls~D~~~~~g~~~~i~~~~~~EgP~v--fK~~G~YYL~y 344 (463)
++||.|.+.. .+.....-++.|..++.-.. .++.. ..-.-.+ .|.||+|+|+-
T Consensus 106 ~y~mtYTa~s~~g~~~~la~t~~f~n~~rig-~i~~p-dn~~~~lfP~~~ngk~~~lh 161 (314)
T COG2152 106 RYYMTYTAYSDKGPRLALAVTKDFLNWERIG-AIFPP-DNKDAALFPKKINGKYALLH 161 (314)
T ss_pred EEEEEEEecCCCCcccchhhhhhhhhhhhcc-cccCC-CCCCceEeeEEecCcEEEEE
Confidence 9999999742 22233334566766653221 12221 1111122 26799999985
No 81
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=94.29 E-value=2.6 Score=41.10 Aligned_cols=172 Identities=14% Similarity=0.094 Sum_probs=96.4
Q ss_pred cCcEEEEEe--CCC-CCCEEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCC--CCCcceEEEEEeC
Q 012453 185 IIGVGCYSS--KDM-WTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDC--NYTKAAVGVAISD 259 (463)
Q Consensus 185 ~~gi~v~sS--~DL-v~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~--~~~~~~IgVA~Sd 259 (463)
..++.++.| +|. .+|+....+..... .....+-|.+++++ +|+.+|+|..... ......+...+|+
T Consensus 15 ~~d~~i~~S~s~D~G~tWs~~~~v~~~~~--------~~~~~~~p~~~~~~-~g~l~l~~~~~~~~~~~~~~~~~~~~S~ 85 (275)
T PF13088_consen 15 AIDIVIRRSRSTDGGKTWSEPRIVADGPK--------PGRRYGNPSLVVDP-DGRLWLFYSAGSSGGGWSGSRIYYSRST 85 (275)
T ss_dssp CEEEEEEEECCCCCTTEEEEEEEEETSTB--------TTCEEEEEEEEEET-TSEEEEEEEEEETTESCCTCEEEEEEES
T ss_pred CCCEEEEEEEeeCCCCeeCCCEEEeeccc--------cCCcccCcEEEEeC-CCCEEEEEEEccCCCCCCceeEEEEEEC
Confidence 346788888 887 56999987766431 24567899999865 9999999855432 1234555568888
Q ss_pred CCCCCceeccccCC--CC--CCccCceEEEcCCCcEEEEEEecC--CCcEEEEEcCCCCCCccccEEEeecC-ceeeeeE
Q 012453 260 YPTGPFDYLYSKRP--HG--FDSRDMTIFKDDDGVAYLVYSSED--NSELHIGPLTSDYLDVSNVVRRILVG-QHREAPA 332 (463)
Q Consensus 260 sP~GPf~~~~~~~p--~g--~~siDp~vF~DdDG~~YL~yg~~~--n~~i~ia~Ls~D~~~~~g~~~~i~~~-~~~EgP~ 332 (463)
+---.|+......+ .. ...+...+++-.||+.++.+.... +....+..-++...++... ..+... ...|...
T Consensus 86 D~G~TWs~~~~l~~~~~~~~~~~~~~~~i~~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW~~~-~~~~~~~~~~e~~~ 164 (275)
T PF13088_consen 86 DGGKTWSEPTDLPPGWFGNFSGPGRGPPIQLPDGRLIAPYYHESGGSFSAFVYYSDDGGKTWSSG-SPIPDGQGECEPSI 164 (275)
T ss_dssp STTSS-EEEEEEHHHCCCSCEECSEEEEEEECTTEEEEEEEEESSCEEEEEEEEESSTTSSEEEE-EECECSEEEEEEEE
T ss_pred CCCCCCCCccccccccccceeccceeeeeEecCCCEEEEEeeccccCcceEEEEeCCCCceeecc-ccccccCCcceeEE
Confidence 74346876542110 11 112333334456998888643321 1233343434444444321 111122 3455555
Q ss_pred EEEECCEEEEEEeCCCCCCCCcEEEEEeCCCCCCcee
Q 012453 333 LFKHLGTYYMVTSGCTGWAPNEALVHAAESIMGPWED 369 (463)
Q Consensus 333 vfK~~G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~ 369 (463)
+...+|..++++-.. +- .....++|++--.-|+.
T Consensus 165 ~~~~dG~l~~~~R~~-~~--~~~~~~~S~D~G~TWs~ 198 (275)
T PF13088_consen 165 VELPDGRLLAVFRTE-GN--DDIYISRSTDGGRTWSP 198 (275)
T ss_dssp EEETTSEEEEEEEEC-SS--TEEEEEEESSTTSS-EE
T ss_pred EECCCCcEEEEEEcc-CC--CcEEEEEECCCCCcCCC
Confidence 555689999998753 11 13444567765556886
No 82
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=87.35 E-value=37 Score=34.77 Aligned_cols=168 Identities=23% Similarity=0.420 Sum_probs=88.8
Q ss_pred cCCE-EEEEEEEeCCC-----CCcceEEEEEeCCCCCCceeccc-cCCC-----CCCc----cCceEEEcCCCcEEEEEE
Q 012453 233 RTGK-YVMWMHIDDCN-----YTKAAVGVAISDYPTGPFDYLYS-KRPH-----GFDS----RDMTIFKDDDGVAYLVYS 296 (463)
Q Consensus 233 ~~Gk-Yymy~s~~~~~-----~~~~~IgVA~SdsP~GPf~~~~~-~~p~-----g~~s----iDp~vF~DdDG~~YL~yg 296 (463)
.+|+ |+.|.+.+.-+ +..-.-++|.|++.-..|+.... ..+. |... .=..-|..+||-.|++=.
T Consensus 103 v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~~g~~~~~~~fq~~a~~~~dgyVYv~gt 182 (316)
T PF13810_consen 103 VGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFHPGFNQGNWNFQMAAFVKDDGYVYVYGT 182 (316)
T ss_pred ECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCcccccccccCCccccccccccccccCCCCEEEEEeC
Confidence 4555 55555554321 12235689999997777887652 1111 1111 122234446777777654
Q ss_pred ecC-CCcEEEEEcCCCCC-C------cccc----------EEEeecCceeeeeEEEE-ECCEEEEEEeCCCCCCCCcEEE
Q 012453 297 SED-NSELHIGPLTSDYL-D------VSNV----------VRRILVGQHREAPALFK-HLGTYYMVTSGCTGWAPNEALV 357 (463)
Q Consensus 297 ~~~-n~~i~ia~Ls~D~~-~------~~g~----------~~~i~~~~~~EgP~vfK-~~G~YYL~yS~~tg~~~n~~v~ 357 (463)
..+ ++.+++++..++-+ . +.+. ...|+.+..-|-....- +.|+|-|+|-.. .++.+.
T Consensus 183 ~~~R~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~vgElSv~~~~~~gk~Vl~~~~~----~~~~I~ 258 (316)
T PF13810_consen 183 PFGRNGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPVGELSVRYNEYLGKWVLSYFDA----GTGGIV 258 (316)
T ss_pred CCCCCCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCccceEEEEeCCCCEEEEEEecc----cCCcEE
Confidence 332 46788888765311 1 1111 13444455666643332 389999999643 224555
Q ss_pred E-EeCCCCCCceeCCCccccCCcccceeccCCCceEEEcccCCcc-cEEEEEeEeC
Q 012453 358 H-AAESIMGPWEDMGNPCIGGNKVFRLTTFFAQSTYVIPLAGLPG-LYIFMADRWN 411 (463)
Q Consensus 358 ~-~S~s~~GPw~~~g~Pv~~~~~~~~~~t~~sq~~~V~~~~G~~~-~yi~~~d~w~ 411 (463)
+ +|++|.|||+.....+.... . ...| +++|.|-.-.++ .|+++ -.|+
T Consensus 259 ~RtA~~P~GpWs~~~~l~~~~~-~--~~lY---ggyihP~s~~g~~L~~~v-S~W~ 307 (316)
T PF13810_consen 259 LRTAPSPTGPWSEPKPLVTVEE-V--PQLY---GGYIHPWSTSGDDLYFVV-SQWN 307 (316)
T ss_pred EEecCCCCCCCCCCeeEEeCCc-C--Ccce---eeEeCCCccCCCCEEEEE-EEcc
Confidence 4 69999999986432222111 0 1223 356766542223 45444 5777
No 83
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=80.65 E-value=63 Score=32.06 Aligned_cols=171 Identities=13% Similarity=0.161 Sum_probs=91.0
Q ss_pred eeceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceeccccCC--CCCCccCceEEEc-CCCcEEEEEEecCC
Q 012453 224 ERPKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSKRP--HGFDSRDMTIFKD-DDGVAYLVYSSEDN 300 (463)
Q Consensus 224 WAP~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~~p--~g~~siDp~vF~D-dDG~~YL~yg~~~n 300 (463)
=-|.+++ .||||.+|.+..+...+-..+.+. +.-.|..+..... ......=|.||.= +...+||+|. |++
T Consensus 26 KD~T~V~--ynGk~~VyAtt~d~~~~y~sm~f~----~Ftdws~~~sA~q~~m~~~~vAP~vFYFaPk~~W~L~yQ-wg~ 98 (271)
T PF03664_consen 26 KDFTIVP--YNGKHHVYATTADTGGGYGSMNFG----PFTDWSQMASASQNYMDQSAVAPQVFYFAPKNIWYLAYQ-WGP 98 (271)
T ss_pred cCceEEe--ECCEEEEEEEeccCCCccceEeee----ccCCHHHhhccccccCCcccccceEEEecCCcEEEEEEe-cCC
Confidence 3488886 899999999876432111112111 1112333322111 1223556788764 6778999997 433
Q ss_pred CcEEEEEcCCCCCCccc--cEEEeecC------ceeeeeEEEEECCEEEEEEeCCCCCCCCcEEEEEeCCCCCCceeC-C
Q 012453 301 SELHIGPLTSDYLDVSN--VVRRILVG------QHREAPALFKHLGTYYMVTSGCTGWAPNEALVHAAESIMGPWEDM-G 371 (463)
Q Consensus 301 ~~i~ia~Ls~D~~~~~g--~~~~i~~~------~~~EgP~vfK~~G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~~-g 371 (463)
.....+-+.|-....| .++.++.+ ...=-.+|+-.+-.-|||+++..| . .|||.-+.|-|-.. |
T Consensus 99 -~~fsY~Ts~DptnpngWSapq~lf~g~i~~~~~g~iD~~vI~D~~n~yLFfa~DnG-----k-iYRs~~~i~nFP~~fg 171 (271)
T PF03664_consen 99 -AAFSYSTSSDPTNPNGWSAPQPLFSGSISGSGTGPIDQWVICDDTNMYLFFAGDNG-----K-IYRSSMPIGNFPGGFG 171 (271)
T ss_pred -CcceeecCCCCCCCccCCCCcccccccccCCCCCceeeEEEecCCceEEEEcCCCC-----c-EEEeccchhhCCCCCC
Confidence 2233455666555442 23333322 112334677778889999986432 2 46777777766443 3
Q ss_pred -Cc--cccCCcccceeccCCCceEEEcccCCcccEEEEEeEeCCCC
Q 012453 372 -NP--CIGGNKVFRLTTFFAQSTYVIPLAGLPGLYIFMADRWNPAD 414 (463)
Q Consensus 372 -~P--v~~~~~~~~~~t~~sq~~~V~~~~G~~~~yi~~~d~w~~~~ 414 (463)
++ ++.... ..-|-+ .-|-+++|. +.||++-.+..+.+
T Consensus 172 s~~~vvmsd~~---~nLFEA--~~VYkv~G~-~~YLmiVEaiGs~g 211 (271)
T PF03664_consen 172 SSYTVVMSDTR---NNLFEA--VQVYKVKGQ-NQYLMIVEAIGSDG 211 (271)
T ss_pred CceEEEEecCc---cceeee--eEEEEEcCC-ceEEEEEEEecCCC
Confidence 22 222111 112221 346677773 56888888777643
No 84
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=68.19 E-value=7.8 Score=39.71 Aligned_cols=68 Identities=19% Similarity=0.134 Sum_probs=43.2
Q ss_pred ceEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCCCCceecccc-CC---CC--CCccCceEEEcCCCcEEEEEEecC
Q 012453 226 PKVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPTGPFDYLYSK-RP---HG--FDSRDMTIFKDDDGVAYLVYSSED 299 (463)
Q Consensus 226 P~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~GPf~~~~~~-~p---~g--~~siDp~vF~DdDG~~YL~yg~~~ 299 (463)
-+|.|++..|||+|.+.-. ....|.+.+|++|+|||+..... .. .+ ...|.|..- .+...|++-+.|.
T Consensus 234 lSv~~~~~~gk~Vl~~~~~----~~~~I~~RtA~~P~GpWs~~~~l~~~~~~~~lYggyihP~s~--~g~~L~~~vS~W~ 307 (316)
T PF13810_consen 234 LSVRYNEYLGKWVLSYFDA----GTGGIVLRTAPSPTGPWSEPKPLVTVEEVPQLYGGYIHPWST--SGDDLYFVVSQWN 307 (316)
T ss_pred eEEEEeCCCCEEEEEEecc----cCCcEEEEecCCCCCCCCCCeeEEeCCcCCcceeeEeCCCcc--CCCCEEEEEEEcc
Confidence 4788888899999877632 23579999999999999854321 11 11 134555431 2334777776664
No 85
>KOG3545 consensus Olfactomedin and related extracellular matrix glycoproteins [Extracellular structures]
Probab=55.47 E-value=1.3e+02 Score=29.95 Aligned_cols=70 Identities=19% Similarity=0.358 Sum_probs=45.7
Q ss_pred CCCccCceEEEcCCCcEEEEEEecC-CCcEEEEEcCCCCCCccccEEEeecCceeeeeEEEEECCEEEEEEeCCCC
Q 012453 275 GFDSRDMTIFKDDDGVAYLVYSSED-NSELHIGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSGCTG 349 (463)
Q Consensus 275 g~~siDp~vF~DdDG~~YL~yg~~~-n~~i~ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vfK~~G~YYL~yS~~tg 349 (463)
|..-|| +-+|+.| .|.+|...+ ++.|.+++|++..+.+......-..++...+.+|+- |.-|.+-|..+.
T Consensus 121 g~sdiD--~avDE~G-LWviYat~~~~g~iv~skLdp~tl~~e~tW~T~~~k~~~~~aF~iC--GvLY~v~S~~~~ 191 (249)
T KOG3545|consen 121 GHSDID--LAVDENG-LWVIYATPENAGTIVLSKLDPETLEVERTWNTTLPKRSAGNAFMIC--GVLYVVHSYNCT 191 (249)
T ss_pred CCcccc--ceecccc-eeEEecccccCCcEEeeccCHHHhheeeeeccccCCCCcCceEEEe--eeeEEEeccccC
Confidence 344566 4458887 567777654 567888999997666554443334445556555554 999999997553
No 86
>smart00284 OLF Olfactomedin-like domains.
Probab=54.52 E-value=35 Score=33.97 Aligned_cols=67 Identities=21% Similarity=0.388 Sum_probs=46.8
Q ss_pred CCCccCceEEEcCCCcEEEEEEecC-CCcEEEEEcCCCCCCccccEEEeecCceeeeeEEEEECCEEEEEEeC
Q 012453 275 GFDSRDMTIFKDDDGVAYLVYSSED-NSELHIGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSG 346 (463)
Q Consensus 275 g~~siDp~vF~DdDG~~YL~yg~~~-n~~i~ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vfK~~G~YYL~yS~ 346 (463)
|...|| +-+|+.| .|.+|.... ++.|.++||+++-+++......-...+..+.++|+- |.-|.+.|.
T Consensus 127 ~~sdiD--lAvDE~G-LWvIYat~~~~g~ivvSkLnp~tL~ve~tW~T~~~k~sa~naFmvC--GvLY~~~s~ 194 (255)
T smart00284 127 GFSDID--LAVDENG-LWVIYATEQNAGKIVISKLNPATLTIENTWITTYNKRSASNAFMIC--GILYVTRSL 194 (255)
T ss_pred CCccEE--EEEcCCc-eEEEEeccCCCCCEEEEeeCcccceEEEEEEcCCCcccccccEEEe--eEEEEEccC
Confidence 344455 5668887 577777754 478999999998888766555444455566666655 888988873
No 87
>PF02191 OLF: Olfactomedin-like domain; InterPro: IPR003112 The olfactomedin-domain was first identified in olfactomedin, an extracellular matrix protein of the olfactory neuroepithelium []. Members of this extracellular domain-family have since been shown to be present in several metazoan proteins, such as latrophilins, myocilins, optimedins and noelins, the latter being involved in the generation of neural crest cells. Myocilin is of considerable interest, as mutations in its olfactomedin-domain can lead to glaucoma []. The olfactomedin-domains in myocilin and optimedin are essential for the interaction between these two proteins [].; GO: 0005515 protein binding
Probab=40.81 E-value=1.1e+02 Score=30.39 Aligned_cols=68 Identities=21% Similarity=0.361 Sum_probs=46.6
Q ss_pred CCccCceEEEcCCCcEEEEEEecCC-CcEEEEEcCCCCCCccccEEEeecCceeeeeEEEEECCEEEEEEeCCC
Q 012453 276 FDSRDMTIFKDDDGVAYLVYSSEDN-SELHIGPLTSDYLDVSNVVRRILVGQHREAPALFKHLGTYYMVTSGCT 348 (463)
Q Consensus 276 ~~siDp~vF~DdDG~~YL~yg~~~n-~~i~ia~Ls~D~~~~~g~~~~i~~~~~~EgP~vfK~~G~YYL~yS~~t 348 (463)
..-|| +-+|+.| .|++|...++ +.|.++||+++-+++......-...+..+..+|+ =|..|.+.|..+
T Consensus 123 ~t~iD--~AvDE~G-LWvIYat~~~~g~ivvskld~~tL~v~~tw~T~~~k~~~~naFmv--CGvLY~~~s~~~ 191 (250)
T PF02191_consen 123 YTDID--FAVDENG-LWVIYATEDNNGNIVVSKLDPETLSVEQTWNTSYPKRSAGNAFMV--CGVLYATDSYDT 191 (250)
T ss_pred CceEE--EEEcCCC-EEEEEecCCCCCcEEEEeeCcccCceEEEEEeccCchhhcceeeE--eeEEEEEEECCC
Confidence 44555 5568776 6888887654 4699999999888776555443444455555554 499999998644
No 88
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=29.46 E-value=5.9e+02 Score=25.55 Aligned_cols=170 Identities=15% Similarity=0.119 Sum_probs=89.5
Q ss_pred CcEEEEEeCC-CCCCEEeceecccCCcccccccCCCCeeeeceEEEEccCCEEEEEEEEeCCC---------CCcceEEE
Q 012453 186 IGVGCYSSKD-MWTWKNEGIVLAAEETNETHDLYKLNVLERPKVIYNDRTGKYVMWMHIDDCN---------YTKAAVGV 255 (463)
Q Consensus 186 ~gi~v~sS~D-Lv~W~~~g~vL~~~~~~~~~~~~~~~~iWAP~vi~n~~~GkYymy~s~~~~~---------~~~~~IgV 255 (463)
..+.+..|+| ..+|+....+..... ....++-|.++.+.. |+-+|++...... ....++.+
T Consensus 46 ~~iv~~~S~D~G~tW~~~~~i~~~~~--------~~~~~~~p~~v~~~~-g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (351)
T cd00260 46 IDIVARRSTDGGKTWSPSTVISDGDG--------KSSRVKDPTVVVDGL-GRVFLLVGSFPNGEGEDNDYAGPSNAYLVL 116 (351)
T ss_pred cceeEEEeccCCCcccccEEehhcCC--------CCCcEEcceEEEcCC-CCEEEEEEECCCcccccccccCCCceEEEE
Confidence 3577777776 579999855544221 124578899998544 6666665543211 13467888
Q ss_pred EEeCCCCCCceeccccCCC----CCCc----cCceEEEcCCCcEEEEEEecCCC---cEEEEEcCCCCCCccccEEEeec
Q 012453 256 AISDYPTGPFDYLYSKRPH----GFDS----RDMTIFKDDDGVAYLVYSSEDNS---ELHIGPLTSDYLDVSNVVRRILV 324 (463)
Q Consensus 256 A~SdsP~GPf~~~~~~~p~----g~~s----iDp~vF~DdDG~~YL~yg~~~n~---~i~ia~Ls~D~~~~~g~~~~i~~ 324 (463)
..|++.-..|.......+. .... --..+. -.||+..+........ ...+...+++...+.-. ..+..
T Consensus 117 ~~S~D~G~tW~~p~~l~~~~~~~~~~~~~~~~g~gi~-l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~-~~~~~ 194 (351)
T cd00260 117 VYSDDDGITWSSPRDLTPSVKGDNWAALFTGPGSGIQ-MKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLG-EGVND 194 (351)
T ss_pred EEEEcCCceecCCccCCccccCcceeEEEecCcCeEE-ecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEEC-CCCCC
Confidence 8998854467653322111 1111 111233 3588877665543221 23333444444544311 01111
Q ss_pred -CceeeeeEEEEE-CCEEEEEEeCCCCCCCCcEEEEEeCCCCCCceeC
Q 012453 325 -GQHREAPALFKH-LGTYYMVTSGCTGWAPNEALVHAAESIMGPWEDM 370 (463)
Q Consensus 325 -~~~~EgP~vfK~-~G~YYL~yS~~tg~~~n~~v~~~S~s~~GPw~~~ 370 (463)
....| |.|+.. +|..+|+..... ......+.|++----|+..
T Consensus 195 ~~~~~e-~~i~el~dG~l~~~~R~~~---~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 195 AGGCSE-CSVVELSDGKLYMYTRDNS---GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred CCCCcC-CEEEEecCCEEEEEEeeCC---CCcEEEEEEcCCCcCcccC
Confidence 22345 666666 899988776432 1234445676643358765
No 89
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=24.04 E-value=7.4e+02 Score=24.84 Aligned_cols=175 Identities=11% Similarity=0.108 Sum_probs=90.9
Q ss_pred cEEEEEeCCC-CCCEEeceecccCC-cccccccCCCCeeeec--eEEEEccCCEEEEEEEEeCCCCCcceEEEEEeCCCC
Q 012453 187 GVGCYSSKDM-WTWKNEGIVLAAEE-TNETHDLYKLNVLERP--KVIYNDRTGKYVMWMHIDDCNYTKAAVGVAISDYPT 262 (463)
Q Consensus 187 gi~v~sS~DL-v~W~~~g~vL~~~~-~~~~~~~~~~~~iWAP--~vi~n~~~GkYymy~s~~~~~~~~~~IgVA~SdsP~ 262 (463)
.+.+..|+|. .+|+....+..... ..|. ..+=+| -+.. .+|+.++-+...... ......+..|++--
T Consensus 113 ~~~~~~S~D~G~tW~~p~~l~~~~~~~~~~------~~~~~~g~gi~l--~~Grlv~p~~~~~~~-~~~~~~~~~S~D~G 183 (351)
T cd00260 113 YLVLVYSDDDGITWSSPRDLTPSVKGDNWA------ALFTGPGSGIQM--KDGRLVFPVYGGNAG-GRVSSAIIYSDDSG 183 (351)
T ss_pred EEEEEEEEcCCceecCCccCCccccCccee------EEEecCcCeEEe--cCCcEEEEEEEEcCC-CCEEEEEEEECCCC
Confidence 4566667665 78987654433211 0111 011111 2332 579888766654322 23456677888754
Q ss_pred CCceeccccCCCCCCccCceEEEcCCCcEEEEEEecCCCcEEEEEcCCCCCCccccEEEe---------ecCceeeeeEE
Q 012453 263 GPFDYLYSKRPHGFDSRDMTIFKDDDGVAYLVYSSEDNSELHIGPLTSDYLDVSNVVRRI---------LVGQHREAPAL 333 (463)
Q Consensus 263 GPf~~~~~~~p~g~~siDp~vF~DdDG~~YL~yg~~~n~~i~ia~Ls~D~~~~~g~~~~i---------~~~~~~EgP~v 333 (463)
-.|+.... .+.......|+++.-.||+.+|+......+.+.+++-++...++....... ......++..+
T Consensus 184 ~tW~~~~~-~~~~~~~~e~~i~el~dG~l~~~~R~~~~~~~~~~~S~D~G~tWs~~~~~~~~~~~~~~~~~~~g~~~~~i 262 (351)
T cd00260 184 KTWKLGEG-VNDAGGCSECSVVELSDGKLYMYTRDNSGGRRPVYESRDMGTTWTEALGTLSRVWGNCPTRCGSGVQGSFI 262 (351)
T ss_pred CCcEECCC-CCCCCCCcCCEEEEecCCEEEEEEeeCCCCcEEEEEEcCCCcCcccCcCCccccccccccCCCCcccceEE
Confidence 45875422 111145678899987899999887765234566666666566665432211 11223344333
Q ss_pred EEE-C-CEEEEEEeCCCCCCCCcE-EEEEeCCCCCCceeCC
Q 012453 334 FKH-L-GTYYMVTSGCTGWAPNEA-LVHAAESIMGPWEDMG 371 (463)
Q Consensus 334 fK~-~-G~YYL~yS~~tg~~~n~~-v~~~S~s~~GPw~~~g 371 (463)
-.. + |+-.|+++.......... ..+.+++-..-|....
T Consensus 263 ~~~~~~g~~~ll~~~~~~~~~R~~l~l~~s~d~g~~w~~~~ 303 (351)
T cd00260 263 TATIESGKKVMLLSRPNSPDSRSNLTLWLTDNNGSRWLDVG 303 (351)
T ss_pred EeEecCCCEEEEEeCCCCCCCCCceEEEEEeCCCceEEeee
Confidence 322 3 777788875322111122 2235555444576654
Done!