Query         012459
Match_columns 463
No_of_seqs    191 out of 2353
Neff          10.7
Searched_HMMs 46136
Date          Fri Mar 29 02:52:08 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012459.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012459hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02290 cytokinin trans-hydro 100.0 9.4E-75   2E-79  573.8  45.6  438   24-463    22-516 (516)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 1.5E-75 3.2E-80  549.7  37.6  401   40-462    27-499 (499)
  3 KOG0156 Cytochrome P450 CYP2 s 100.0 1.6E-74 3.5E-79  551.3  37.3  397   43-461    25-487 (489)
  4 KOG0157 Cytochrome P450 CYP4/C 100.0 9.3E-73   2E-77  550.4  37.1  403   42-462    33-496 (497)
  5 PLN02774 brassinosteroid-6-oxi 100.0 2.4E-71 5.1E-76  541.3  35.4  390   44-460    31-462 (463)
  6 PLN02500 cytochrome P450 90B1  100.0 3.8E-71 8.3E-76  544.1  34.7  397   43-461    37-489 (490)
  7 PTZ00404 cytochrome P450; Prov 100.0 3.8E-71 8.3E-76  543.8  33.4  398   40-461    25-482 (482)
  8 PLN02971 tryptophan N-hydroxyl 100.0   1E-69 2.3E-74  538.2  36.5  400   43-462    56-534 (543)
  9 PLN02183 ferulate 5-hydroxylas 100.0 7.4E-70 1.6E-74  537.5  34.7  398   43-461    35-511 (516)
 10 PLN02169 fatty acid (omega-1)- 100.0   2E-69 4.4E-74  530.3  37.3  398   42-461    29-499 (500)
 11 PLN00110 flavonoid 3',5'-hydro 100.0 1.1E-69 2.4E-74  533.2  35.4  425   11-462     4-497 (504)
 12 PLN00168 Cytochrome P450; Prov 100.0 2.4E-69 5.2E-74  534.3  37.5  402   43-462    34-517 (519)
 13 PLN03234 cytochrome P450 83B1; 100.0 1.3E-69 2.8E-74  535.4  35.5  400   43-461    27-498 (499)
 14 PLN02687 flavonoid 3'-monooxyg 100.0 1.7E-69 3.7E-74  535.1  33.8  399   44-462    34-509 (517)
 15 PLN02196 abscisic acid 8'-hydr 100.0 5.4E-69 1.2E-73  524.2  36.7  390   43-461    34-462 (463)
 16 PLN02394 trans-cinnamate 4-mon 100.0 7.8E-69 1.7E-73  530.3  37.6  400   43-462    29-502 (503)
 17 PLN03195 fatty acid omega-hydr 100.0 8.1E-69 1.7E-73  531.0  35.7  399   44-462    30-516 (516)
 18 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-67 2.7E-72  521.4  40.0  403   43-463    41-489 (490)
 19 PLN03141 3-epi-6-deoxocathaste 100.0 6.4E-68 1.4E-72  516.0  34.0  399   43-462     6-450 (452)
 20 PLN03112 cytochrome P450 famil 100.0 1.5E-67 3.2E-72  522.2  34.6  400   43-462    31-508 (514)
 21 PF00067 p450:  Cytochrome P450 100.0 2.5E-68 5.5E-73  524.4  27.1  394   46-458     1-463 (463)
 22 PLN02966 cytochrome P450 83A1  100.0   2E-67 4.4E-72  518.9  33.2  376   44-438    29-471 (502)
 23 KOG0684 Cytochrome P450 [Secon 100.0   5E-67 1.1E-71  468.5  30.1  394   44-462    31-485 (486)
 24 PLN02655 ent-kaurene oxidase   100.0 7.4E-67 1.6E-71  510.1  33.8  393   46-462     1-464 (466)
 25 KOG0159 Cytochrome P450 CYP11/ 100.0 1.2E-66 2.5E-71  478.1  31.1  400   42-463    48-519 (519)
 26 PLN02738 carotene beta-ring hy 100.0 2.9E-66 6.3E-71  515.2  36.1  374   83-462   152-595 (633)
 27 PLN02987 Cytochrome P450, fami 100.0 2.1E-66 4.6E-71  504.3  34.2  398   44-462    30-469 (472)
 28 PLN03018 homomethionine N-hydr 100.0 2.8E-65   6E-70  502.9  35.9  399   44-462    40-524 (534)
 29 PLN02936 epsilon-ring hydroxyl 100.0 5.7E-64 1.2E-68  491.9  35.0  397   47-462    15-482 (489)
 30 PLN02426 cytochrome P450, fami 100.0 6.6E-63 1.4E-67  483.5  38.7  370   83-462    61-500 (502)
 31 PLN02648 allene oxide synthase 100.0 4.2E-55 9.1E-60  422.0  25.4  378   43-439    16-464 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 2.5E-53 5.4E-58  405.1  29.2  345   87-462    27-411 (411)
 33 PF05952 ComX:  Bacillus compet  69.1     4.8  0.0001   26.1   2.2   18  285-302     4-21  (57)
 34 COG4459 NapE Periplasmic nitra  64.3      24 0.00052   22.6   4.5    7   45-51     55-61  (62)
 35 PF12508 DUF3714:  Protein of u  58.9     3.4 7.4E-05   35.0   0.2   44  321-365    51-94  (200)
 36 PF12554 MOZART1:  Mitotic-spin  55.5      44 0.00094   20.9   4.6   43  262-304     5-47  (48)
 37 PF08492 SRP72:  SRP72 RNA-bind  55.0     7.3 0.00016   25.5   1.2    9  385-393    44-52  (59)
 38 PF12273 RCR:  Chitin synthesis  52.0      13 0.00029   29.1   2.5    7   53-59     33-39  (130)
 39 PF09201 SRX:  SRX;  InterPro:   49.7      14  0.0003   28.8   2.1   22  408-429    19-40  (148)
 40 PRK10332 hypothetical protein;  49.0      91   0.002   23.4   6.2   38    1-38     11-48  (107)
 41 PF13625 Helicase_C_3:  Helicas  47.6      80  0.0017   24.6   6.3   38   83-122    75-112 (129)
 42 PF11138 DUF2911:  Protein of u  43.9      31 0.00068   27.6   3.4   42  345-388    51-99  (145)
 43 PF14129 DUF4296:  Domain of un  41.8 1.3E+02  0.0027   21.6   6.1   49  260-308    30-78  (87)
 44 PF07219 HemY_N:  HemY protein   41.7      70  0.0015   24.1   5.0   25   11-35     21-45  (108)
 45 PRK06789 flagellar motor switc  39.5      44 0.00095   23.2   3.1   39  328-366    21-62  (74)
 46 KOG3506 40S ribosomal protein   37.9      15 0.00033   23.3   0.6   10  401-410    13-22  (56)
 47 PF08114 PMP1_2:  ATPase proteo  36.3      18 0.00039   21.4   0.7   25    9-33     11-35  (43)
 48 TIGR03779 Bac_Flav_CT_M Bacter  35.3      10 0.00022   36.1  -0.6   44  321-365   254-297 (410)
 49 COG0851 MinE Septum formation   34.0      91   0.002   22.4   4.0   17  293-309    35-51  (88)
 50 PF08776 VASP_tetra:  VASP tetr  33.9      86  0.0019   18.6   3.2   28  294-334    10-37  (40)
 51 COG3898 Uncharacterized membra  33.7 1.1E+02  0.0024   29.0   5.6   38    4-41     39-76  (531)
 52 PF05399 EVI2A:  Ectropic viral  32.7 1.6E+02  0.0036   25.0   6.0    7   33-39    159-165 (227)
 53 PHA02902 putative IMV membrane  30.9 1.4E+02  0.0031   19.8   4.2    7   44-50     28-34  (70)
 54 COG3763 Uncharacterized protei  29.9 1.8E+02   0.004   19.8   5.6   19    1-19      1-19  (71)
 55 PF15300 INT_SG_DDX_CT_C:  INTS  28.1      45 0.00097   22.4   1.7   16  321-336    39-54  (65)
 56 PRK14740 kdbF potassium-transp  27.9 1.1E+02  0.0024   16.6   3.0   19    6-24      3-21  (29)
 57 PF10717 ODV-E18:  Occlusion-de  27.9      95   0.002   21.9   3.2    7    8-14     28-34  (85)
 58 PF07886 BA14K:  BA14K-like pro  27.8      51  0.0011   18.4   1.6   16  395-410    16-31  (31)
 59 PF15080 DUF4547:  Domain of un  26.4 2.4E+02  0.0052   22.8   5.6   50  258-307   112-171 (196)
 60 PRK13991 cell division topolog  26.4 1.8E+02  0.0039   21.0   4.6   17  293-309    35-51  (87)
 61 PF15330 SIT:  SHP2-interacting  26.1      80  0.0017   23.8   2.9   11   51-61     45-55  (107)
 62 PF06667 PspB:  Phage shock pro  25.3 1.9E+02  0.0041   20.2   4.3   25    1-25      1-25  (75)
 63 COG1759 5-formaminoimidazole-4  25.2 1.1E+02  0.0023   28.2   4.0   71  324-424   274-352 (361)
 64 PF00599 Flu_M2:  Influenza Mat  24.4 2.5E+02  0.0054   19.8   4.7   19   16-34     32-50  (97)
 65 COG2101 SPT15 TATA-box binding  24.0      24 0.00052   28.9  -0.2   31  383-413    36-70  (185)
 66 PF07219 HemY_N:  HemY protein   23.9 2.7E+02  0.0058   20.9   5.6   25    1-25     14-38  (108)
 67 PF15050 SCIMP:  SCIMP protein   23.3 1.9E+02  0.0042   22.0   4.3   12   46-57     70-82  (133)
 68 PF05568 ASFV_J13L:  African sw  22.9 2.1E+02  0.0046   22.6   4.7    9    8-16     32-40  (189)
 69 PRK11875 psbT photosystem II r  22.2 1.6E+02  0.0034   16.4   3.1   17    5-21      3-19  (31)
 70 COG5394 Uncharacterized protei  21.9 4.4E+02  0.0096   21.5   6.8   51  259-311    75-125 (193)
 71 TIGR00589 ogt O-6-methylguanin  21.1   2E+02  0.0044   20.2   4.1   61  295-356     2-67  (80)
 72 PF10264 Stork_head:  Winged he  20.6 2.7E+02  0.0058   19.7   4.4   39  281-319    14-54  (80)
 73 PF15179 Myc_target_1:  Myc tar  20.4 1.9E+02  0.0042   24.0   4.2   26    4-29     23-48  (197)
 74 PF15050 SCIMP:  SCIMP protein   20.3 1.7E+02  0.0036   22.4   3.5   19    8-26      8-26  (133)
 75 PF07849 DUF1641:  Protein of u  20.3 1.3E+02  0.0028   18.1   2.5   18  284-301    13-30  (42)

No 1  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=9.4e-75  Score=573.83  Aligned_cols=438  Identities=37%  Similarity=0.705  Sum_probs=343.4

Q ss_pred             HHHHHHHhhhHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEecc
Q 012459           24 LKFVYSFIWVPHRIQRHFKEQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWF  103 (463)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~  103 (463)
                      +..+..++..++..+...++++||||+++|++||++++....+....+.....+++...+....+.+|+++||++|++|+
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~  101 (516)
T PLN02290         22 YDTISCYFLTPRRIKKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWN  101 (516)
T ss_pred             HHHHHHHhccHHHHHHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEcc
Confidence            44455566777777777888999999999999999988643222211111112233334455568899999999999999


Q ss_pred             CCcceEEeCCHHHHHHHHhcCCCCccccCccc--hhhhhccCcccccCChhHHHhhhhccCCCcHHHhhhhhhHHHhhHH
Q 012459          104 GSKPRLAISDPDMIKEVLMDTSGSFEKIGFNP--LSRQLFGQGLVGLTGDKWAIHRRISNQAFNMERVKGWVPDIVASPR  181 (463)
Q Consensus       104 g~~~~vvv~dp~~v~~vl~~~~~~~~~~~~~~--~~~~~~g~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~  181 (463)
                      |+.+.|+++||+++++++.++ ..+..++...  ......|.++++.+|+.|+++|+++++.|+..+++.+.+.+.++++
T Consensus       102 g~~~~vvv~dp~~v~~il~~~-~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~  180 (516)
T PLN02290        102 GTEPRLCLTETELIKELLTKY-NTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTK  180 (516)
T ss_pred             CCccEEEECCHHHHHHHHhcC-CCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHH
Confidence            999999999999999999854 4454444322  2233467889899999999999999999999999988888777766


Q ss_pred             HHH-------------------------------Hhccccccccccc-----------------cchhhcccCCchhHHH
Q 012459          182 RCL-------------------------------RIGKKLEEGEMNL-----------------KLMCIKFLPTKKNRER  213 (463)
Q Consensus       182 ~~~-------------------------------~fG~~~~~~~~~l-----------------~~~~~~~~p~~~~~~~  213 (463)
                      .++                               +||.+++..+...                 .++.+.++|....+..
T Consensus       181 ~l~~~l~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~  260 (516)
T PLN02290        181 QMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREI  260 (516)
T ss_pred             HHHHHHHHHHhcCCceEEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHH
Confidence            655                               4665543221100                 1122233443333445


Q ss_pred             HHHHHHHHHHHHHHHHhcCccccch--hhHHHHHHHhccccCC----CCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHH
Q 012459          214 QRLESETRESIRMLIKNNGKTRESS--RNLLSLLMSSCKNHDG----QEERLDVEEIIDECKTFYFAGKETTANLLTWAL  287 (463)
Q Consensus       214 ~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~l~~l~~~~~----~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l  287 (463)
                      .+..+.+.+++.+.++++++....+  +....|+++.+++..+    ++..++++++.+++.++++||+|||+++++|++
T Consensus       261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l  340 (516)
T PLN02290        261 KSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTL  340 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            5566778888888887665432111  0112577777765422    123488999999999999999999999999999


Q ss_pred             HHHhcCHHHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEcc
Q 012459          288 VLLAMHQEWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIAL  367 (463)
Q Consensus       288 ~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~  367 (463)
                      ++|++||++|+|+++||++++|.+ .++.+++++|||++|||+||||++|+++.++|.+.+|++++||.|||||.|.++.
T Consensus       341 ~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~  419 (516)
T PLN02290        341 MLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPV  419 (516)
T ss_pred             HHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecH
Confidence            999999999999999999999864 7899999999999999999999999999889999999999999999999999999


Q ss_pred             chhccCCCCccCCCCCCCCCCCCCCcC-CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceee
Q 012459          368 TAVHHDTDLWGEDANEFNPLRFNESRK-HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFI  446 (463)
Q Consensus       368 ~~~~~dp~~~g~~p~~F~P~R~~~~~~-~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~  446 (463)
                      +++||||++||+||++|+||||++... ....|+|||.|+|+|+|++||++|+++++++|+++|++++.++.........
T Consensus       420 ~~~~rdp~~~~~dP~~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~  499 (516)
T PLN02290        420 LAIHHSEELWGKDANEFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVL  499 (516)
T ss_pred             HHhcCChhhhCCChhhcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCcccee
Confidence            999999999966999999999995432 3457999999999999999999999999999999999998776444445578


Q ss_pred             eeccCCCceEEEeecCC
Q 012459          447 SMQPQHGAHILFSRIHN  463 (463)
Q Consensus       447 ~~~p~~~~~~~~~~r~~  463 (463)
                      +++|.+|++|++++|++
T Consensus       500 ~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        500 TIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             eecCCCCCeEEEEeCCC
Confidence            99999999999999985


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-75  Score=549.67  Aligned_cols=401  Identities=26%  Similarity=0.433  Sum_probs=323.0

Q ss_pred             HHHHcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHH
Q 012459           40 HFKEQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKE  119 (463)
Q Consensus        40 ~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~  119 (463)
                      +++++|+|||+++|++||+..+.+.                 +.+.....+...+||+++.++.+.++.++|+||+.+++
T Consensus        27 yw~rrGi~~~~p~p~~Gn~~~~~~~-----------------~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~   89 (499)
T KOG0158|consen   27 YWRRRGIPGPKPLPFLGNLPGMLKR-----------------ERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKE   89 (499)
T ss_pred             hhccCCCCCCCCCCcEecHHHHHhc-----------------cCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHH
Confidence            3456699999999999999988861                 11222333333444999999999999999999999999


Q ss_pred             HHhcCCCCccccC--ccchhh-hhccCcccccCChhHHHhhhhccCCCcHHHhhhhhhHHHhhHHHHH------------
Q 012459          120 VLMDTSGSFEKIG--FNPLSR-QLFGQGLVGLTGDKWAIHRRISNQAFNMERVKGWVPDIVASPRRCL------------  184 (463)
Q Consensus       120 vl~~~~~~~~~~~--~~~~~~-~~~g~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~------------  184 (463)
                      |+.++.++|..+.  ...... .+...++++.+|++||++|..++|.|++.+++.+.+.+++.+++++            
T Consensus        90 I~ik~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~  169 (499)
T KOG0158|consen   90 ILIKDFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQE  169 (499)
T ss_pred             HHHHhCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCC
Confidence            9999999999954  332222 3445789999999999999999999999999999999988888777            


Q ss_pred             ------------------Hhcccccccccc---c-------------cchh----hcccCC-----chhHHHHHHHHHHH
Q 012459          185 ------------------RIGKKLEEGEMN---L-------------KLMC----IKFLPT-----KKNRERQRLESETR  221 (463)
Q Consensus       185 ------------------~fG~~~~~~~~~---l-------------~~~~----~~~~p~-----~~~~~~~~~~~~~~  221 (463)
                                        +||...++..+.   +             ..++    ....|.     ..........+.+.
T Consensus       170 ~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~  249 (499)
T KOG0158|consen  170 GEIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFR  249 (499)
T ss_pred             ccHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHH
Confidence                              566555433320   0             0010    000010     01111233344555


Q ss_pred             HHHHHHHHhcCccccchhhHHHHHHHhccccCCC---C---C-CCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCH
Q 012459          222 ESIRMLIKNNGKTRESSRNLLSLLMSSCKNHDGQ---E---E-RLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQ  294 (463)
Q Consensus       222 ~~~~~~i~~~~~~~~~~~~~~~~~l~~l~~~~~~---~---~-~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p  294 (463)
                      +.+...++.|..+....    .|+++.+++.+.+   +   . .+|.+||+++++.+++||.||||+++++++|+|++||
T Consensus       250 ~~v~~~v~~R~~~~~~r----~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~P  325 (499)
T KOG0158|consen  250 KLVNSRVEQREKENIER----NDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNP  325 (499)
T ss_pred             HHHHHHHHHHHhcCCCC----chHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcCh
Confidence            66666666663333222    7888888877532   1   2 5999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccccccccccceeeC-CeeeCCCCEEEEccchhccC
Q 012459          295 EWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLG-NLDVPAGTQLYIALTAVHHD  373 (463)
Q Consensus       295 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~-g~~ip~G~~v~~~~~~~~~d  373 (463)
                      ++|+|+|+||++++.+...+++|.+++|+||++||+||||+||+++.+.|.+++|++++ ++.|+||+.|.++++++|||
T Consensus       326 dvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~D  405 (499)
T KOG0158|consen  326 DVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHD  405 (499)
T ss_pred             HHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCC
Confidence            99999999999998765559999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             CCCccCCCCCCCCCCCCCCcC---CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCce---eee
Q 012459          374 TDLWGEDANEFNPLRFNESRK---HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPML---FIS  447 (463)
Q Consensus       374 p~~~g~~p~~F~P~R~~~~~~---~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~---~~~  447 (463)
                      |++| |||++|+||||.+.+.   ++..|+|||.|||+|+|++||++|+|+++++||++|+++..+........   +++
T Consensus       406 p~~~-p~Pe~F~PERF~~~~~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~  484 (499)
T KOG0158|consen  406 PEYW-PEPEKFKPERFEEENNKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFT  484 (499)
T ss_pred             cccC-CCcccCCCccCCCCcccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCcccee
Confidence            9999 9999999999997653   67899999999999999999999999999999999999987632222334   788


Q ss_pred             eccCCCceEEEeecC
Q 012459          448 MQPQHGAHILFSRIH  462 (463)
Q Consensus       448 ~~p~~~~~~~~~~r~  462 (463)
                      +.|++|+++++++|+
T Consensus       485 l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  485 LSPKGGIWLKLEPRD  499 (499)
T ss_pred             eecCCceEEEEEeCC
Confidence            999999999999985


No 3  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.6e-74  Score=551.29  Aligned_cols=397  Identities=25%  Similarity=0.384  Sum_probs=319.0

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      .+-||||+++|+|||++++..                  ..++..+.+|+++|||+|.+|+|..++|||+|+++++|++.
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~------------------~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~   86 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGS------------------LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLV   86 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCC------------------CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHH
Confidence            457999999999999999874                  14788999999999999999999999999999999999999


Q ss_pred             cCCCCccccCcc-chhhhhc--cCccccc-CChhHHHhhhhccCCC-cHHHhhhhhhHHHhhHHHHH-------------
Q 012459          123 DTSGSFEKIGFN-PLSRQLF--GQGLVGL-TGDKWAIHRRISNQAF-NMERVKGWVPDIVASPRRCL-------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~-~~~~~~~--g~~l~~~-~~~~w~~~R~~~~~~f-~~~~l~~~~~~~~~~~~~~~-------------  184 (463)
                      +++..|+.|+.. .....+.  +.|++++ +|+.|+.+||+....+ +...+++....-.++++.++             
T Consensus        87 ~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vd  166 (489)
T KOG0156|consen   87 KQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVD  166 (489)
T ss_pred             hCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceee
Confidence            999999999972 2333333  3567666 8999999999877764 54444443332222222211             


Q ss_pred             ----------------Hhccccccccc---c-c------------------cch-hhcccCC--chhHHHHHHHHHHHHH
Q 012459          185 ----------------RIGKKLEEGEM---N-L------------------KLM-CIKFLPT--KKNRERQRLESETRES  223 (463)
Q Consensus       185 ----------------~fG~~~~~~~~---~-l------------------~~~-~~~~~p~--~~~~~~~~~~~~~~~~  223 (463)
                                      +||.+++..+.   . +                  .+| ++.+++.  ...+.......++.++
T Consensus       167 l~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~  246 (489)
T KOG0156|consen  167 LSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEF  246 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHH
Confidence                            78988876321   0 1                  334 3455542  2344555555568899


Q ss_pred             HHHHHHhcCccccchhhHHHHHHHhccccCCC--CCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHH
Q 012459          224 IRMLIKNNGKTRESSRNLLSLLMSSCKNHDGQ--EERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAR  301 (463)
Q Consensus       224 ~~~~i~~~~~~~~~~~~~~~~~l~~l~~~~~~--~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  301 (463)
                      +++++++++..... ++. .|+++.++...++  ...++++++.+.+.++++||+|||++++.|++.+|++||++|+|++
T Consensus       247 ~~~~i~eh~~~~~~-~~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~q  324 (489)
T KOG0156|consen  247 LERIIDEHREKIGD-EEG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQ  324 (489)
T ss_pred             HHHHHHHHHhhhcc-CCC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHH
Confidence            99999888665411 111 6788888776442  2239999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhccCCCCccCC
Q 012459          302 EEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGED  380 (463)
Q Consensus       302 ~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~  380 (463)
                      +||++++|.++.++.+|+.++|||+|+|+|++|++|++|. ++|.+.+|++|+||.|||||.|++++|++||||++| +|
T Consensus       325 eEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw-~d  403 (489)
T KOG0156|consen  325 EEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVW-ED  403 (489)
T ss_pred             HHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccC-CC
Confidence            9999999988889999999999999999999999999995 899999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCCc---CCCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCC-CCCCceeeeeccCCCceE
Q 012459          381 ANEFNPLRFNESR---KHLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSY-VHAPMLFISMQPQHGAHI  456 (463)
Q Consensus       381 p~~F~P~R~~~~~---~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~  456 (463)
                      |++|+||||++..   .....++|||.|+|+|||+.+|++++.++++.|+++|||+++++. ...+. +.++..+.+..+
T Consensus       404 P~eF~PERFl~~~d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~-~~~~~~~~pl~~  482 (489)
T KOG0156|consen  404 PEEFKPERFLDSNDGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEA-GLTLKKKKPLKA  482 (489)
T ss_pred             ccccChhhhcCCccccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCccc-ccceecCCccee
Confidence            9999999999863   256789999999999999999999999999999999999988661 11222 255555556666


Q ss_pred             EEeec
Q 012459          457 LFSRI  461 (463)
Q Consensus       457 ~~~~r  461 (463)
                      ...+|
T Consensus       483 ~~~~r  487 (489)
T KOG0156|consen  483 VPVPR  487 (489)
T ss_pred             eeecC
Confidence            55554


No 4  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=9.3e-73  Score=550.43  Aligned_cols=403  Identities=33%  Similarity=0.563  Sum_probs=334.9

Q ss_pred             HHcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHH
Q 012459           42 KEQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVL  121 (463)
Q Consensus        42 ~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl  121 (463)
                      +.+.+|||+++|++|+++.+.+..                .++..++.++..+||++|+.|+|+.++++++||+.+++|+
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il   96 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPL----------------EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEIL   96 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcch----------------hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHH
Confidence            445789999999999999987510                3567789999999999999999999999999999999999


Q ss_pred             hcCCCCccccCccc-hhhhhccCcccccCChhHHHhhhhccCCCcHHHhhhhhhHHHhhHHHHH----------------
Q 012459          122 MDTSGSFEKIGFNP-LSRQLFGQGLVGLTGDKWAIHRRISNQAFNMERVKGWVPDIVASPRRCL----------------  184 (463)
Q Consensus       122 ~~~~~~~~~~~~~~-~~~~~~g~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~----------------  184 (463)
                      .++.+.+.+.+.+. .+..++|+|+++++|+.|+++||+++++|+.+.++.+...+.+++..+.                
T Consensus        97 ~~~~~~~~k~~~~~~~~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~  176 (497)
T KOG0157|consen   97 KSSNENYPKGPDYPESLKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQD  176 (497)
T ss_pred             hcCcccCCCchhHHHHHHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHH
Confidence            76667777777666 7888999999999999999999999999999999998888777665533                


Q ss_pred             -------------Hhcccc-ccccccc------------------cch-hhcccCC-chhHHHHHHHHHHHHHHHHHHHh
Q 012459          185 -------------RIGKKL-EEGEMNL------------------KLM-CIKFLPT-KKNRERQRLESETRESIRMLIKN  230 (463)
Q Consensus       185 -------------~fG~~~-~~~~~~l------------------~~~-~~~~~p~-~~~~~~~~~~~~~~~~~~~~i~~  230 (463)
                                   +||... +......                  ..| ...++.. ...++..++.+.+++.+.+++++
T Consensus       177 ~~~~~tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~  256 (497)
T KOG0157|consen  177 LLKRLTLDIICKTAMGPESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRE  256 (497)
T ss_pred             HHHHHHHHHHHHHhcCCccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence                         566111 1111100                  223 2222322 25677788899999999999988


Q ss_pred             cCccccch----hhHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 012459          231 NGKTRESS----RNLLSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQ  306 (463)
Q Consensus       231 ~~~~~~~~----~~~~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  306 (463)
                      +++.....    .....|+++.+....+  ..+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++|+.+
T Consensus       257 rr~~~~~~~~~~~~~~~d~L~~~~~~~~--~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~  334 (497)
T KOG0157|consen  257 RREELEKEGSGEEKKRLDFLDTLLLEED--KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDE  334 (497)
T ss_pred             HHHHHHhcCCcccchhhhHHHHHHHhcc--CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            87643211    1233678875333322  57999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCc-chHHhhccChhHHHHHHhhhcCCCCccccccccccceee-CCeeeCCCCEEEEccchhccCCCCccCCCCCC
Q 012459          307 VCGDNDL-RLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKL-GNLDVPAGTQLYIALTAVHHDTDLWGEDANEF  384 (463)
Q Consensus       307 ~~~~~~~-~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F  384 (463)
                      +++.+.. ....+.++|+|+++||+|||||+||+|.+.|.+.+|+++ +||.||||+.|.++++++||||++||+||++|
T Consensus       335 i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F  414 (497)
T KOG0157|consen  335 ILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEF  414 (497)
T ss_pred             HhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhc
Confidence            9984432 233333369999999999999999999999999999999 58999999999999999999999997799999


Q ss_pred             CCCCCCCCcC----CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeeccCCCceEEEee
Q 012459          385 NPLRFNESRK----HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQPQHGAHILFSR  460 (463)
Q Consensus       385 ~P~R~~~~~~----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  460 (463)
                      |||||+++..    +++.|+|||+|+|.|+|+.||++|+|+++++|+++|++++.++....+....+++|++|++|++++
T Consensus       415 ~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~  494 (497)
T KOG0157|consen  415 DPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRP  494 (497)
T ss_pred             CccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEe
Confidence            9999996432    478999999999999999999999999999999999999887765677889999999999999999


Q ss_pred             cC
Q 012459          461 IH  462 (463)
Q Consensus       461 r~  462 (463)
                      |.
T Consensus       495 r~  496 (497)
T KOG0157|consen  495 RG  496 (497)
T ss_pred             CC
Confidence            86


No 5  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.4e-71  Score=541.32  Aligned_cols=390  Identities=20%  Similarity=0.266  Sum_probs=314.6

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHhc
Q 012459           44 QGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMD  123 (463)
Q Consensus        44 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~  123 (463)
                      ..||||+++|++||++.+.+                   ++..++.+|.++||++|++++|+.++++++||+++++++.+
T Consensus        31 ~~ppgp~~~P~~G~~~~~~~-------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~   91 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFLK-------------------QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMN   91 (463)
T ss_pred             CCCCCCCCCCchhhHHHHHH-------------------hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcC
Confidence            45689999999999988754                   35568899999999999999999999999999999999986


Q ss_pred             CCCCccccCccchhhhhcc-CcccccCChhHHHhhhhccCCCcHHHhhh-hhhHHHhhHHHHH-----------------
Q 012459          124 TSGSFEKIGFNPLSRQLFG-QGLVGLTGDKWAIHRRISNQAFNMERVKG-WVPDIVASPRRCL-----------------  184 (463)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~g-~~l~~~~~~~w~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~~-----------------  184 (463)
                      +...|.++....... ++| .+++..+|+.|+++|+++++.|+...++. +.+.+.+.+++++                 
T Consensus        92 ~~~~~~~~~~~~~~~-~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  170 (463)
T PLN02774         92 EGKGLVPGYPQSMLD-ILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKE  170 (463)
T ss_pred             CCCeEEecCCHHHHH-HhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHH
Confidence            666665543322333 344 46777899999999999999999988875 6777776665544                 


Q ss_pred             ---------Hhccccccccccc------cc----hhhcccCCchhHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHH
Q 012459          185 ---------RIGKKLEEGEMNL------KL----MCIKFLPTKKNRERQRLESETRESIRMLIKNNGKTRESSRNLLSLL  245 (463)
Q Consensus       185 ---------~fG~~~~~~~~~l------~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  245 (463)
                               .||...+.....+      ..    .....+|....++..++.+.+.+++.+.++++++.....    +|+
T Consensus       171 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~d~  246 (463)
T PLN02774        171 MALLSALKQIAGTLSKPISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGETH----TDM  246 (463)
T ss_pred             HHHHHHHHHHcCCCChHHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCCCc----ccH
Confidence                     3443322111110      00    001123433345566778888889988888776543222    578


Q ss_pred             HHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC---CCcchHHhhccC
Q 012459          246 MSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCGD---NDLRLAEKLSDL  322 (463)
Q Consensus       246 l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~l  322 (463)
                      ++.+++..+++..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++.   ++.++.++++++
T Consensus       247 l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~l  326 (463)
T PLN02774        247 LGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSM  326 (463)
T ss_pred             HHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcC
Confidence            88887644433458999999999999999999999999999999999999999999999999863   356889999999


Q ss_pred             hhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcC-CCccccc
Q 012459          323 KIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRK-HLASFFP  401 (463)
Q Consensus       323 ~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~-~~~~~~~  401 (463)
                      ||++|||+|+||++|+++.+.|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||++++. ....|+|
T Consensus       327 pyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~~~~~~lp  405 (463)
T PLN02774        327 RFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLY-PDPMTFNPWRWLDKSLESHNYFFL  405 (463)
T ss_pred             cHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccC-CChhccCchhcCCCCcCCCccccC
Confidence            9999999999999999998889999999999999999999999999999999999 9999999999996543 2346999


Q ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeeccCCCceEEEee
Q 012459          402 FGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQPQHGAHILFSR  460 (463)
Q Consensus       402 Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  460 (463)
                      ||+|+|.|+|++||.+|++++++.|+++|++++.++....  ...+..|++|++|++++
T Consensus       406 FG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~--~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        406 FGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLM--KFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             cCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccc--cCCCCCCCCCceEEeee
Confidence            9999999999999999999999999999999987664322  23456699999999975


No 6  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=3.8e-71  Score=544.13  Aligned_cols=397  Identities=21%  Similarity=0.281  Sum_probs=309.7

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      .+-||||+++|++||++.+...      .        ..+.++.++.+|.++||++|++++|+.++|+++||++++++|.
T Consensus        37 ~~~PPgp~~~PiiGn~~~~~~~------~--------~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~  102 (490)
T PLN02500         37 FNLPPGNMGWPFLGETIGYLKP------Y--------SATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQ  102 (490)
T ss_pred             CCCCCCCcCCCchhhHHHHHhh------c--------ccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHh
Confidence            3468899999999998765421      0        0124567889999999999999999999999999999999998


Q ss_pred             cCCCCccccCccchhhhhcc-CcccccCChhHHHhhhhccCCCcHHHhhh-hhhHHHhhHHHHH----------------
Q 012459          123 DTSGSFEKIGFNPLSRQLFG-QGLVGLTGDKWAIHRRISNQAFNMERVKG-WVPDIVASPRRCL----------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~g-~~l~~~~~~~w~~~R~~~~~~f~~~~l~~-~~~~~~~~~~~~~----------------  184 (463)
                      +++..|.++..... ..++| .++++.+|+.|+++|+++++.|+..+++. +.+.+.+.+..++                
T Consensus       103 ~~~~~f~~~~~~~~-~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~  181 (490)
T PLN02500        103 NEGRLFECSYPRSI-GGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAK  181 (490)
T ss_pred             CCCCeEEeeCchHH-HHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHH
Confidence            76666765432222 22344 46888899999999999999999988876 4555555544433                


Q ss_pred             ----------Hhcccccccc-ccc------cch----hhcccCCchhHHHHHHHHHHHHHHHHHHHhcCccccchh--hH
Q 012459          185 ----------RIGKKLEEGE-MNL------KLM----CIKFLPTKKNRERQRLESETRESIRMLIKNNGKTRESSR--NL  241 (463)
Q Consensus       185 ----------~fG~~~~~~~-~~l------~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~  241 (463)
                                +||.+.+..+ ..+      ...    ....+|....++..++.+.+.+++.+.++++++....++  ..
T Consensus       182 ~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  261 (490)
T PLN02500        182 KFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVE  261 (490)
T ss_pred             HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Confidence                      5665433211 100      000    011234333345556677788888888776544221110  01


Q ss_pred             HHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhC-----CCCcchH
Q 012459          242 LSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCG-----DNDLRLA  316 (463)
Q Consensus       242 ~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-----~~~~~~~  316 (463)
                      ..|+++.+++.    ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++     .++.++.
T Consensus       262 ~~d~l~~ll~~----~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~  337 (490)
T PLN02500        262 EDDLLGWVLKH----SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNW  337 (490)
T ss_pred             cchHHHHHHhc----cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCH
Confidence            25788888864    24899999999999999999999999999999999999999999999999874     2345789


Q ss_pred             HhhccChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcC--
Q 012459          317 EKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRK--  394 (463)
Q Consensus       317 ~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~--  394 (463)
                      +|+++|||++|||+||||++|+++.++|.+.+|++++||.|||||.|.++.+++||||++| +||++|+||||++++.  
T Consensus       338 ~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~-~dP~~F~PeRfl~~~~~~  416 (490)
T PLN02500        338 EDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLY-DQPQLFNPWRWQQNNNRG  416 (490)
T ss_pred             HHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccC-CCccccChhhccCCCccc
Confidence            9999999999999999999999998889999999999999999999999999999999999 9999999999996432  


Q ss_pred             --------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeeccCCCceEEEeec
Q 012459          395 --------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQPQHGAHILFSRI  461 (463)
Q Consensus       395 --------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  461 (463)
                              .+..|+|||+|+|+|+|++||++|+++++++|+++|+|++.++..... . ....+.+|++|++++.
T Consensus       417 ~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~-~-~~~~~~~~l~~~~~~~  489 (490)
T PLN02500        417 GSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFA-F-PFVDFPKGLPIRVRRI  489 (490)
T ss_pred             ccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCccee-c-ccccCCCCceEEEEeC
Confidence                    246799999999999999999999999999999999999876644322 2 2345668999999863


No 7  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3.8e-71  Score=543.84  Aligned_cols=398  Identities=22%  Similarity=0.334  Sum_probs=314.3

Q ss_pred             HHHHcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHH
Q 012459           40 HFKEQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKE  119 (463)
Q Consensus        40 ~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~  119 (463)
                      +.+.+.+|||+++|++||++.+..                   +++..+.+|+++||++|++++|+.++|+++||+++++
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~~~-------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~   85 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQLGN-------------------LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIRE   85 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhhcc-------------------cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHH
Confidence            345678999999999999987642                   4677899999999999999999999999999999999


Q ss_pred             HHhcCCCCccccCccc-hhhhhccCcccccCChhHHHhhhhccCCCcHHHhhhhhhHHHhhHHHHH--------------
Q 012459          120 VLMDTSGSFEKIGFNP-LSRQLFGQGLVGLTGDKWAIHRRISNQAFNMERVKGWVPDIVASPRRCL--------------  184 (463)
Q Consensus       120 vl~~~~~~~~~~~~~~-~~~~~~g~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~--------------  184 (463)
                      ++.++...|.+++... .....++.|+++.+|+.|+++|+++++.|+..+++.+.+.+.+.+..++              
T Consensus        86 il~~~~~~~~~r~~~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd  165 (482)
T PTZ00404         86 MFVDNFDNFSDRPKIPSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFE  165 (482)
T ss_pred             HHHhcchhhcCCCCcceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccC
Confidence            9986666677665443 2222347788899999999999999999999999998888877777666              


Q ss_pred             ----------------Hhcccccccc-------ccc------cch------hhcccC----C--chhHHHHHHHHHHHHH
Q 012459          185 ----------------RIGKKLEEGE-------MNL------KLM------CIKFLP----T--KKNRERQRLESETRES  223 (463)
Q Consensus       185 ----------------~fG~~~~~~~-------~~l------~~~------~~~~~p----~--~~~~~~~~~~~~~~~~  223 (463)
                                      +||......+       ..+      .+.      ....++    .  .......+....+.++
T Consensus       166 ~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (482)
T PTZ00404        166 PRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKF  245 (482)
T ss_pred             HHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHH
Confidence                            5676543211       111      000      000000    0  0111223445566777


Q ss_pred             HHHHHHhcCccccchhhHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHH
Q 012459          224 IRMLIKNNGKTRESSRNLLSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREE  303 (463)
Q Consensus       224 ~~~~i~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  303 (463)
                      +.+.++++++.....  ...|+++.+++..++....+.+++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       246 ~~~~i~~~~~~~~~~--~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~E  323 (482)
T PTZ00404        246 IKEKYHEHLKTIDPE--VPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNE  323 (482)
T ss_pred             HHHHHHHHHHccCCC--CcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence            776666543322111  115788877765332222233458899999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceee-CCeeeCCCCEEEEccchhccCCCCccCCC
Q 012459          304 VFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKL-GNLDVPAGTQLYIALTAVHHDTDLWGEDA  381 (463)
Q Consensus       304 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~dp~~~g~~p  381 (463)
                      |++++++++.++.+++++|||++|||+||||++|+++. ++|.+.+|+++ +||.|||||.|.++.+++||||++| +||
T Consensus       324 i~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~-~dP  402 (482)
T PTZ00404        324 IKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYF-ENP  402 (482)
T ss_pred             HHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCcccc-CCc
Confidence            99999876678999999999999999999999999996 78999999999 9999999999999999999999999 999


Q ss_pred             CCCCCCCCCCCcCCCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCC--CCceeeeeccCCCceEEEe
Q 012459          382 NEFNPLRFNESRKHLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVH--APMLFISMQPQHGAHILFS  459 (463)
Q Consensus       382 ~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~  459 (463)
                      ++|+||||++.. ....|+|||.|+|.|+|++||.+|+++++++|+++|++++.++.+.  ....+.++.| ++++|+++
T Consensus       403 ~~F~PeRwl~~~-~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~  480 (482)
T PTZ00404        403 EQFDPSRFLNPD-SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLKP-NKFKVLLE  480 (482)
T ss_pred             cccCccccCCCC-CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeecC-CCceeeee
Confidence            999999998643 4568999999999999999999999999999999999998765432  2234566665 67999999


Q ss_pred             ec
Q 012459          460 RI  461 (463)
Q Consensus       460 ~r  461 (463)
                      +|
T Consensus       481 ~R  482 (482)
T PTZ00404        481 KR  482 (482)
T ss_pred             cC
Confidence            87


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=1e-69  Score=538.24  Aligned_cols=400  Identities=16%  Similarity=0.234  Sum_probs=304.8

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhC-CcEEeccCCcceEEeCCHHHHHHHH
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYG-KTFLYWFGSKPRLAISDPDMIKEVL  121 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG-~v~~~~~g~~~~vvv~dp~~v~~vl  121 (463)
                      .+.||||+++|++||++++...                 ...+.++.+|.++|| ++|++++|+.++|+|+||+.++++|
T Consensus        56 ~~lPPGP~~lPiiGnl~~l~~~-----------------~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl  118 (543)
T PLN02971         56 HPLPPGPTGFPIVGMIPAMLKN-----------------RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIF  118 (543)
T ss_pred             CCCCcCCCCCCcccchHHhccC-----------------CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHH
Confidence            3578999999999999877430                 112567899999999 7999999999999999999999999


Q ss_pred             hcCCCCccccCccchhhhhccCc----ccccCChhHHHhhhhccCCC-cHHHhhhhhhHHHhhHHHHH------------
Q 012459          122 MDTSGSFEKIGFNPLSRQLFGQG----LVGLTGDKWAIHRRISNQAF-NMERVKGWVPDIVASPRRCL------------  184 (463)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~g~~----l~~~~~~~w~~~R~~~~~~f-~~~~l~~~~~~~~~~~~~~~------------  184 (463)
                      .+++..|.+++...... ..+++    ++..+|+.|+++|+++++.| +....+.+.+.+++.++.++            
T Consensus       119 ~~~~~~f~~rp~~~~~~-~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  197 (543)
T PLN02971        119 KQQDALFASRPLTYAQK-ILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEP  197 (543)
T ss_pred             HhcchhhcCCCcccchh-hccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence            97788898887544322 33443    67788999999999997554 44444444444433332222            


Q ss_pred             ------------------Hhccccccc------cc--c-c-----c---------chhhcccCC-------chhHHHHHH
Q 012459          185 ------------------RIGKKLEEG------EM--N-L-----K---------LMCIKFLPT-------KKNRERQRL  216 (463)
Q Consensus       185 ------------------~fG~~~~~~------~~--~-l-----~---------~~~~~~~p~-------~~~~~~~~~  216 (463)
                                        +||.+....      +.  . +     .         .....++|.       ...+...+.
T Consensus       198 vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~  277 (543)
T PLN02971        198 VDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRES  277 (543)
T ss_pred             eehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHH
Confidence                              688764210      00  0 0     0         001112221       112233444


Q ss_pred             HHHHHHHHHHHHHhcCccccch-hhHHHHHHHhccccCCCC-C-CCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcC
Q 012459          217 ESETRESIRMLIKNNGKTRESS-RNLLSLLMSSCKNHDGQE-E-RLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMH  293 (463)
Q Consensus       217 ~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~l~~l~~~~~~~-~-~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~  293 (463)
                      .+.+.+++.+.++++++....+ +....|+++.+++..+++ . .++++++.+++.++++||+|||+++++|++++|++|
T Consensus       278 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~  357 (543)
T PLN02971        278 SAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINK  357 (543)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhC
Confidence            5567777777776654321111 001157888887654322 2 499999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhcc
Q 012459          294 QEWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHH  372 (463)
Q Consensus       294 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~  372 (463)
                      |++|+|+++||++++++++.++.+++++|||++|||+|+||++|++|. ++|.+.+|++++||.|||||.|.++++++||
T Consensus       358 Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~  437 (543)
T PLN02971        358 PEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGR  437 (543)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcC
Confidence            999999999999999987889999999999999999999999999996 7899999999999999999999999999999


Q ss_pred             CCCCccCCCCCCCCCCCCCCcC------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCC---CCc
Q 012459          373 DTDLWGEDANEFNPLRFNESRK------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVH---APM  443 (463)
Q Consensus       373 dp~~~g~~p~~F~P~R~~~~~~------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~---~~~  443 (463)
                      ||++| +||++|+||||++...      .+..|+|||.|+|+|+|++||+.|+++++++|+++|+|++.++...   .+.
T Consensus       438 d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  516 (543)
T PLN02971        438 NPKVW-SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMES  516 (543)
T ss_pred             ChhhC-CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhh
Confidence            99999 9999999999996432      3467999999999999999999999999999999999998754311   122


Q ss_pred             eeeeeccCCCceEEEeecC
Q 012459          444 LFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       444 ~~~~~~p~~~~~~~~~~r~  462 (463)
                      .+ ++.-++.+.+.+++|.
T Consensus       517 ~~-~~~~~~~~~~~~~~~~  534 (543)
T PLN02971        517 SH-DMFLSKPLVMVGELRL  534 (543)
T ss_pred             cC-cccccccceeeeeecC
Confidence            33 5533457888888873


No 9  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=7.4e-70  Score=537.55  Aligned_cols=398  Identities=21%  Similarity=0.306  Sum_probs=305.8

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      .+.||||+++|++||++.+..                   .++.++.+|+++||++|++++|+.++|+|+||+++++|+.
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~-------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~   95 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQ-------------------LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQ   95 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCC-------------------cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHH
Confidence            457899999999999876532                   2445789999999999999999999999999999999998


Q ss_pred             cCCCCccccCccchhhhhc---cCcccccCChhHHHhhhh-ccCCCcHHHhhhhhhHHHhhHHHHH--------------
Q 012459          123 DTSGSFEKIGFNPLSRQLF---GQGLVGLTGDKWAIHRRI-SNQAFNMERVKGWVPDIVASPRRCL--------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~---g~~l~~~~~~~w~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~~--------------  184 (463)
                      +++..|+.++.........   +.+++..+|+.|+++|++ +++.|+...++.+.+.+ ++++.++              
T Consensus        96 ~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~  174 (516)
T PLN02183         96 VQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIG  174 (516)
T ss_pred             hhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHH
Confidence            7777788776543222222   345777899999999998 57899998888776643 3444443              


Q ss_pred             --------------Hhccccccccccc------------------cchhhccc-CCchhHHHHHHHHHHHHHHHHHHHhc
Q 012459          185 --------------RIGKKLEEGEMNL------------------KLMCIKFL-PTKKNRERQRLESETRESIRMLIKNN  231 (463)
Q Consensus       185 --------------~fG~~~~~~~~~l------------------~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~i~~~  231 (463)
                                    +||...+.....+                  .+|++.++ +....++..+..+.+.+++.++++++
T Consensus       175 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  254 (516)
T PLN02183        175 ELIFTLTRNITYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDH  254 (516)
T ss_pred             HHHHHHHHHHHHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence                          5676543321111                  11222222 11223455556666777777666554


Q ss_pred             Cccccc------hhhHHHHHHHhccccCCC------------CCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcC
Q 012459          232 GKTRES------SRNLLSLLMSSCKNHDGQ------------EERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMH  293 (463)
Q Consensus       232 ~~~~~~------~~~~~~~~l~~l~~~~~~------------~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~  293 (463)
                      .+....      +.....|+++.+++...+            +..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       255 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~  334 (516)
T PLN02183        255 IQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKS  334 (516)
T ss_pred             HHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhC
Confidence            321110      001124677777653211            12589999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEccchhccC
Q 012459          294 QEWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIALTAVHHD  373 (463)
Q Consensus       294 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~d  373 (463)
                      |++|+|+++||+++++.++.++.++++++||++|||+||||++|++|...|.+.+|++++||.|||||.|.++.+++|||
T Consensus       335 Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd  414 (516)
T PLN02183        335 PEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRD  414 (516)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCC
Confidence            99999999999999986677899999999999999999999999999878999999999999999999999999999999


Q ss_pred             CCCccCCCCCCCCCCCCCCcC-----CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCC-----Cc
Q 012459          374 TDLWGEDANEFNPLRFNESRK-----HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHA-----PM  443 (463)
Q Consensus       374 p~~~g~~p~~F~P~R~~~~~~-----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~-----~~  443 (463)
                      |++| +||++|+||||++++.     ....|+|||+|+|+|+|++||.+|+++++|+|+++|++++.++....     ..
T Consensus       415 ~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~  493 (516)
T PLN02183        415 KNSW-EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDV  493 (516)
T ss_pred             cccc-CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhc
Confidence            9999 9999999999996432     34579999999999999999999999999999999999987653211     12


Q ss_pred             eeeeeccCCCceEEEeec
Q 012459          444 LFISMQPQHGAHILFSRI  461 (463)
Q Consensus       444 ~~~~~~p~~~~~~~~~~r  461 (463)
                      .+.+..+...+.+.+++|
T Consensus       494 ~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        494 FGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             cccccccCCCcEEEeecC
Confidence            233432334667777665


No 10 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2e-69  Score=530.35  Aligned_cols=398  Identities=21%  Similarity=0.285  Sum_probs=306.8

Q ss_pred             HHcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEE---eccCCcceEEeCCHHHHH
Q 012459           42 KEQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFL---YWFGSKPRLAISDPDMIK  118 (463)
Q Consensus        42 ~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~---~~~g~~~~vvv~dp~~v~  118 (463)
                      ++.++|||+++|++||++.+...                ....++.+.+..++||..++   .|+|+.++++|+||+.++
T Consensus        29 ~~~~~p~p~~~pl~G~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~   92 (500)
T PLN02169         29 KPHGQPILKNWPFLGMLPGMLHQ----------------IPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIH   92 (500)
T ss_pred             ccCCCCCCCCCCcccchHHHHHc----------------cCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHH
Confidence            45589999999999999877641                01123344444455887666   588999999999999999


Q ss_pred             HHHhcCCCCccccCccchhhhhccCcccccCChhHHHhhhhccCCCcHHHhhhh--hhHHHhhHHHHH------------
Q 012459          119 EVLMDTSGSFEKIGFNPLSRQLFGQGLVGLTGDKWAIHRRISNQAFNMERVKGW--VPDIVASPRRCL------------  184 (463)
Q Consensus       119 ~vl~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~--~~~~~~~~~~~~------------  184 (463)
                      +||.++...|.++..+.....+.|+|+++.+|+.|+++||++++.|+..++..+  .+.+.+.++.++            
T Consensus        93 ~il~~~~~~~~k~~~~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  172 (500)
T PLN02169         93 HILSSNFGNYPKGPEFKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENII  172 (500)
T ss_pred             HHHhhCcccCCCcHHHHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence            999876677777654443344578999999999999999999999988866432  122212111111            


Q ss_pred             ------------------Hhcccccccc-----ccc---------------cchhh-----cccCCchhHHHHHHHHHHH
Q 012459          185 ------------------RIGKKLEEGE-----MNL---------------KLMCI-----KFLPTKKNRERQRLESETR  221 (463)
Q Consensus       185 ------------------~fG~~~~~~~-----~~l---------------~~~~~-----~~~p~~~~~~~~~~~~~~~  221 (463)
                                        +||.+.+...     ..+               ..|++     .+++....++..++.+.+.
T Consensus       173 vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (500)
T PLN02169        173 IDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVN  252 (500)
T ss_pred             EeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence                              6776543211     111               11211     1222333456677788888


Q ss_pred             HHHHHHHHhcCccccc---hhhHHHHHHHhccccCCC----CCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCH
Q 012459          222 ESIRMLIKNNGKTRES---SRNLLSLLMSSCKNHDGQ----EERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQ  294 (463)
Q Consensus       222 ~~~~~~i~~~~~~~~~---~~~~~~~~l~~l~~~~~~----~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p  294 (463)
                      +++.+++++++.....   .++...|+++.+++....    +..++++++.+++.++++||+|||+++++|++++|++||
T Consensus       253 ~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~P  332 (500)
T PLN02169        253 RMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHP  332 (500)
T ss_pred             HHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCH
Confidence            8888888876543110   001125777777765321    124789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccccccccccceee-CCeeeCCCCEEEEccchhccC
Q 012459          295 EWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKL-GNLDVPAGTQLYIALTAVHHD  373 (463)
Q Consensus       295 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~d  373 (463)
                      ++|+|+++||++++      +.+++++||||+|||+||||++|++|.+.|.+.+|.++ +||.|||||.|.++++++|||
T Consensus       333 evq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd  406 (500)
T PLN02169        333 QVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRM  406 (500)
T ss_pred             HHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCC
Confidence            99999999999874      57899999999999999999999999888887777665 999999999999999999999


Q ss_pred             CCCccCCCCCCCCCCCCCCcC-----CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeee
Q 012459          374 TDLWGEDANEFNPLRFNESRK-----HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISM  448 (463)
Q Consensus       374 p~~~g~~p~~F~P~R~~~~~~-----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~  448 (463)
                      |++||+||++|+||||++.+.     .+..|+|||+|+|+|+|++||.+|+++++++|+++|++++.++.........++
T Consensus       407 ~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l  486 (500)
T PLN02169        407 RSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILL  486 (500)
T ss_pred             ccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEE
Confidence            999988999999999996533     257899999999999999999999999999999999999876544444556889


Q ss_pred             ccCCCceEEEeec
Q 012459          449 QPQHGAHILFSRI  461 (463)
Q Consensus       449 ~p~~~~~~~~~~r  461 (463)
                      +|++|++|++++|
T Consensus       487 ~~~~gl~l~l~~~  499 (500)
T PLN02169        487 RMKHGLKVTVTKK  499 (500)
T ss_pred             ecCCCEEEEEEeC
Confidence            9999999999987


No 11 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.1e-69  Score=533.18  Aligned_cols=425  Identities=18%  Similarity=0.319  Sum_probs=329.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHH
Q 012459           11 LLTVIFIVIITSLLKFVYSFIWVPHRIQRHFKEQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHE   90 (463)
Q Consensus        11 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (463)
                      ++-+..+.++..++.++.+.+.+..      +.+.||||+++|++||++.+..                   +++.++.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~pPgp~~~Pl~G~l~~~~~-------------------~~~~~~~~   58 (504)
T PLN00110          4 LLELAAATLLFFITRFFIRSLLPKP------SRKLPPGPRGWPLLGALPLLGN-------------------MPHVALAK   58 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcc------cCCCcccCCCCCeeechhhcCC-------------------chHHHHHH
Confidence            3444455555555555555443222      3346899999999999876532                   36778999


Q ss_pred             HHHHhCCcEEeccCCcceEEeCCHHHHHHHHhcCCCCccccCccch-hhhhcc--CcccccCChhHHHhhhhccC-CCcH
Q 012459           91 WSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMDTSGSFEKIGFNPL-SRQLFG--QGLVGLTGDKWAIHRRISNQ-AFNM  166 (463)
Q Consensus        91 ~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~~~~~~~~~~~~~~-~~~~~g--~~l~~~~~~~w~~~R~~~~~-~f~~  166 (463)
                      |+++||++|++++|+.++|+|+||+++++++.++...|++++.... .....+  .+++..+|+.|+++|+++++ .|+.
T Consensus        59 ~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~  138 (504)
T PLN00110         59 MAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGG  138 (504)
T ss_pred             HHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCH
Confidence            9999999999999999999999999999999877778888765442 222233  35677889999999999985 6899


Q ss_pred             HHhhhhhhHHHhhHHHHH------------------------------Hhccccc-c-c--cccc---------------
Q 012459          167 ERVKGWVPDIVASPRRCL------------------------------RIGKKLE-E-G--EMNL---------------  197 (463)
Q Consensus       167 ~~l~~~~~~~~~~~~~~~------------------------------~fG~~~~-~-~--~~~l---------------  197 (463)
                      .+++.+.+.+.+++..++                              +||..+. . .  ...+               
T Consensus       139 ~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (504)
T PLN00110        139 KALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFN  218 (504)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhcccc
Confidence            888888877666554433                              4665431 1 0  0101               


Q ss_pred             ---cchhhcccCCc-hhHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHhccccCC--CCCCCCHHHHHHHHHHH
Q 012459          198 ---KLMCIKFLPTK-KNRERQRLESETRESIRMLIKNNGKTRESSRNLLSLLMSSCKNHDG--QEERLDVEEIIDECKTF  271 (463)
Q Consensus       198 ---~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~~l~~~~i~~~~~~l  271 (463)
                         .+|.+.+++.. ..+...+..+.+.+++.+.++++++...... ...|+++.+++..+  .+..++++++.++++++
T Consensus       219 ~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~  297 (504)
T PLN00110        219 IGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHERK-GNPDFLDVVMANQENSTGEKLTLTNIKALLLNL  297 (504)
T ss_pred             HHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cCCChhhHHhhcccccCCCCCCHHHHHHHHHhh
Confidence               11111222211 1234445566677777777776554322110 11578888876532  23469999999999999


Q ss_pred             HHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccce
Q 012459          272 YFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGV  350 (463)
Q Consensus       272 ~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~  350 (463)
                      ++||+|||+++++|++++|++||++|+|+++||+++++.++.++.+++++|||++|||+||||++|+++. ++|.+.+|+
T Consensus       298 ~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~  377 (504)
T PLN00110        298 FTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQAC  377 (504)
T ss_pred             hcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCe
Confidence            9999999999999999999999999999999999999877778999999999999999999999999996 789999999


Q ss_pred             eeCCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcC-------CCccccccCCCCCCCcchHHHHHHHHHHH
Q 012459          351 KLGNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRK-------HLASFFPFGLGPRVCVGQNLAMVEAKVVL  423 (463)
Q Consensus       351 ~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~-------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~  423 (463)
                      +++||.|||||.|.++.+++|+||++| +||++|+||||++...       ....++|||+|+|.|+|++||..|+++++
T Consensus       378 ~~~g~~Ip~Gt~V~~~~~~~h~d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~l  456 (504)
T PLN00110        378 EVNGYYIPKNTRLSVNIWAIGRDPDVW-ENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYIL  456 (504)
T ss_pred             eeCCEEECCCCEEEEeHHHhcCChhhc-CCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHH
Confidence            999999999999999999999999999 9999999999996432       12479999999999999999999999999


Q ss_pred             HHHHHhceeeeCCCCCCC--CceeeeeccCCCceEEEeecC
Q 012459          424 AIIIRRFNFFLSPSYVHA--PMLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       424 ~~ll~~f~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~r~  462 (463)
                      ++|+++|++++.++....  ...+.++.|.+++.+++++|.
T Consensus       457 a~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        457 GTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             HHHHHhceeecCCCCccCcccccccccccCCCceEeeccCC
Confidence            999999999987664322  245678889999999999884


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.4e-69  Score=534.29  Aligned_cols=402  Identities=21%  Similarity=0.350  Sum_probs=316.0

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      .+.||||+++|++||++.+...                ..+++.++.+|+++||++|++++|+.++++++||+++++++.
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~----------------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~   97 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNS----------------SADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALV   97 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccc----------------cccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHH
Confidence            3468899999999998765320                124677899999999999999999999999999999999998


Q ss_pred             cCCCCccccCccchhhhhccC--cccc--cCChhHHHhhh-hccCCCcHHHhhhhhhHHHhhHHHHH-------------
Q 012459          123 DTSGSFEKIGFNPLSRQLFGQ--GLVG--LTGDKWAIHRR-ISNQAFNMERVKGWVPDIVASPRRCL-------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~g~--~l~~--~~~~~w~~~R~-~~~~~f~~~~l~~~~~~~~~~~~~~~-------------  184 (463)
                      +++..|+.++...... +.+.  +++.  .+|+.|+++|| ++++.|+.++++.+.+.+.+.++.++             
T Consensus        98 ~~~~~f~~rp~~~~~~-~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v  176 (519)
T PLN00168         98 ERGAALADRPAVASSR-LLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAP  176 (519)
T ss_pred             hcCCccccCCcccchh-hhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence            7778888776543222 2332  3443  68999999986 79999999999998888776665554             


Q ss_pred             -----------------Hhccccccccc-cc-------------cchhhcccCC-------chhHHHHHHHHHHHHHHHH
Q 012459          185 -----------------RIGKKLEEGEM-NL-------------KLMCIKFLPT-------KKNRERQRLESETRESIRM  226 (463)
Q Consensus       185 -----------------~fG~~~~~~~~-~l-------------~~~~~~~~p~-------~~~~~~~~~~~~~~~~~~~  226 (463)
                                       +||.+++.... .+             .......+|.       ...++..+..+.+.+++.+
T Consensus       177 ~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~  256 (519)
T PLN00168        177 RVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVP  256 (519)
T ss_pred             CHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence                             57766542211 00             0001112221       1122334566677778877


Q ss_pred             HHHhcCcccc---c-h---h---hHHHHHHHhccccC---CCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcC
Q 012459          227 LIKNNGKTRE---S-S---R---NLLSLLMSSCKNHD---GQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMH  293 (463)
Q Consensus       227 ~i~~~~~~~~---~-~---~---~~~~~~l~~l~~~~---~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~  293 (463)
                      +++++++...   . +   +   ....|+++.+++..   +.+..++++++.++++++++||+|||+++++|++++|++|
T Consensus       257 ~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~  336 (519)
T PLN00168        257 LIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKN  336 (519)
T ss_pred             HHHHHHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhC
Confidence            7776543210   0 0   0   01246777777543   2224699999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCCC-CcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhc
Q 012459          294 QEWQIKAREEVFQVCGDN-DLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVH  371 (463)
Q Consensus       294 p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~  371 (463)
                      |++|+|+++||+++++++ +.++.+++++|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++|
T Consensus       337 P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~  416 (519)
T PLN00168        337 PSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMG  416 (519)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHh
Confidence            999999999999999753 568999999999999999999999999986 689999999999999999999999999999


Q ss_pred             cCCCCccCCCCCCCCCCCCCCcC---------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCC
Q 012459          372 HDTDLWGEDANEFNPLRFNESRK---------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAP  442 (463)
Q Consensus       372 ~dp~~~g~~p~~F~P~R~~~~~~---------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~  442 (463)
                      |||++| +||++|+||||++...         +...|+|||+|+|+|+|++||.+|+++++++|+++|+|++.++.....
T Consensus       417 ~d~~~~-~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~  495 (519)
T PLN00168        417 RDEREW-ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDF  495 (519)
T ss_pred             cCcccc-CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCCh
Confidence            999999 9999999999996421         245799999999999999999999999999999999999876533222


Q ss_pred             --ceeeeeccCCCceEEEeecC
Q 012459          443 --MLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       443 --~~~~~~~p~~~~~~~~~~r~  462 (463)
                        ..+++..|.++++|++++|+
T Consensus       496 ~~~~~~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        496 AEKREFTTVMAKPLRARLVPRR  517 (519)
T ss_pred             hhhceeEEeecCCcEEEEEecc
Confidence              23567788889999999986


No 13 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=1.3e-69  Score=535.37  Aligned_cols=400  Identities=22%  Similarity=0.330  Sum_probs=317.1

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      .+.||||+++|++||++.+..                  .++..++.+|+++||++|++++|+.++++++||+++++|+.
T Consensus        27 ~~~pPgp~~~P~iG~~~~~~~------------------~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~   88 (499)
T PLN03234         27 LRLPPGPKGLPIIGNLHQMEK------------------FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLK   88 (499)
T ss_pred             CCCCcCCCCCCeeccHHhcCC------------------CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHH
Confidence            357899999999999876532                  24667899999999999999999999999999999999998


Q ss_pred             cCCCCccccCccchhhh--hccCcc-cccCChhHHHhhhhc-cCCCcHHHhhhhhhHHHhhHHHHH--------------
Q 012459          123 DTSGSFEKIGFNPLSRQ--LFGQGL-VGLTGDKWAIHRRIS-NQAFNMERVKGWVPDIVASPRRCL--------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~~~~~--~~g~~l-~~~~~~~w~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~~--------------  184 (463)
                      +++..|.+++.......  ..+.++ +...++.|+++|+.+ .+.|+.+++..+.+.+++.+++++              
T Consensus        89 ~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd  168 (499)
T PLN03234         89 TQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVD  168 (499)
T ss_pred             hCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEE
Confidence            77778888776542221  123333 335678999999974 689999999998888888777766              


Q ss_pred             ----------------Hhccccccccccc---------------------cchhhcccC--CchhHHHHHHHHHHHHHHH
Q 012459          185 ----------------RIGKKLEEGEMNL---------------------KLMCIKFLP--TKKNRERQRLESETRESIR  225 (463)
Q Consensus       185 ----------------~fG~~~~~~~~~l---------------------~~~~~~~~p--~~~~~~~~~~~~~~~~~~~  225 (463)
                                      +||.+++......                     .+|.+.+++  ....++..++.+.+.+++.
T Consensus       169 ~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~  248 (499)
T PLN03234        169 LSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQ  248 (499)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence                            5676654322110                     011111111  1123456677788888888


Q ss_pred             HHHHhcCccccchhhHHHHHHHhccccCCC---CCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHH
Q 012459          226 MLIKNNGKTRESSRNLLSLLMSSCKNHDGQ---EERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKARE  302 (463)
Q Consensus       226 ~~i~~~~~~~~~~~~~~~~~l~~l~~~~~~---~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  302 (463)
                      +.++++........ ...|+++.+++..++   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++
T Consensus       249 ~~i~~~~~~~~~~~-~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~  327 (499)
T PLN03234        249 ELLDETLDPNRPKQ-ETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQD  327 (499)
T ss_pred             HHHHHHHhhcccCC-CcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            88877644321111 114666666644222   13589999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCC
Q 012459          303 EVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDA  381 (463)
Q Consensus       303 Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p  381 (463)
                      ||++++++++.++.+++++|||++|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++||+||
T Consensus       328 Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P  407 (499)
T PLN03234        328 EVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNP  407 (499)
T ss_pred             HHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCCh
Confidence            999999877778999999999999999999999999997 5799999999999999999999999999999999997799


Q ss_pred             CCCCCCCCCCCcC------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCC-C----CCceeeeecc
Q 012459          382 NEFNPLRFNESRK------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYV-H----APMLFISMQP  450 (463)
Q Consensus       382 ~~F~P~R~~~~~~------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~-~----~~~~~~~~~p  450 (463)
                      ++|+||||+++..      ....++|||+|+|+|+|+++|.+|+++++++|+++|+++++++.. +    ....+.+..|
T Consensus       408 ~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  487 (499)
T PLN03234        408 NEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHK  487 (499)
T ss_pred             hhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccccc
Confidence            9999999996532      356799999999999999999999999999999999999876531 1    2244677778


Q ss_pred             CCCceEEEeec
Q 012459          451 QHGAHILFSRI  461 (463)
Q Consensus       451 ~~~~~~~~~~r  461 (463)
                      ++.+.+..++|
T Consensus       488 ~~~~~~~~~~~  498 (499)
T PLN03234        488 KEHLVLAPTKH  498 (499)
T ss_pred             CCCeEEEeecC
Confidence            88777777765


No 14 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.7e-69  Score=535.11  Aligned_cols=399  Identities=19%  Similarity=0.305  Sum_probs=317.1

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHhc
Q 012459           44 QGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMD  123 (463)
Q Consensus        44 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~  123 (463)
                      +.||||+++|++||++++..                   +++.++.+|.++||++|++++|+.++++++||+++++++.+
T Consensus        34 ~~pPgp~~~P~iG~~~~~~~-------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~   94 (517)
T PLN02687         34 PLPPGPRGWPVLGNLPQLGP-------------------KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRT   94 (517)
T ss_pred             CCCccCCCCCccccHHhcCC-------------------chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHh
Confidence            35789999999999886642                   46778999999999999999999999999999999999987


Q ss_pred             CCCCccccCccchhhhhc---cCcccccCChhHHHhhhhcc-CCCcHHHhhhhhhHHHhhHHHHH---------------
Q 012459          124 TSGSFEKIGFNPLSRQLF---GQGLVGLTGDKWAIHRRISN-QAFNMERVKGWVPDIVASPRRCL---------------  184 (463)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~---g~~l~~~~~~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~~---------------  184 (463)
                      +...|.+++.......+.   +++++..+|+.|+++|++++ +.|+.++++.+.+.+++.+.+++               
T Consensus        95 ~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~  174 (517)
T PLN02687         95 HDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLG  174 (517)
T ss_pred             cchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHH
Confidence            777888876544333222   23456678999999999998 78999999888888777766554               


Q ss_pred             --------------Hhcccccccc-----ccc------------------cchhhcccCC-chhHHHHHHHHHHHHHHHH
Q 012459          185 --------------RIGKKLEEGE-----MNL------------------KLMCIKFLPT-KKNRERQRLESETRESIRM  226 (463)
Q Consensus       185 --------------~fG~~~~~~~-----~~l------------------~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~  226 (463)
                                    +||..+...+     ..+                  .+|.+.+++. ...+...+..+.+.+++.+
T Consensus       175 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~  254 (517)
T PLN02687        175 QLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNG  254 (517)
T ss_pred             HHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHH
Confidence                          4665542111     101                  0111112221 1123445566777788888


Q ss_pred             HHHhcCccccchhhHHHHHHHhccccCC------CCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHH
Q 012459          227 LIKNNGKTRESSRNLLSLLMSSCKNHDG------QEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKA  300 (463)
Q Consensus       227 ~i~~~~~~~~~~~~~~~~~l~~l~~~~~------~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  300 (463)
                      +++++++....++....|+++.+++..+      ++..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       255 ~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl  334 (517)
T PLN02687        255 IIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKA  334 (517)
T ss_pred             HHHHHHHhccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHH
Confidence            8887765432111112578888876532      2246999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhccCCCCccC
Q 012459          301 REEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGE  379 (463)
Q Consensus       301 ~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~  379 (463)
                      ++||+++++.++.++.++++++||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++| +
T Consensus       335 ~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~-~  413 (517)
T PLN02687        335 QEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQW-P  413 (517)
T ss_pred             HHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccC-C
Confidence            99999999877788999999999999999999999999996 789999999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCCcC--------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCC-----Cceee
Q 012459          380 DANEFNPLRFNESRK--------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHA-----PMLFI  446 (463)
Q Consensus       380 ~p~~F~P~R~~~~~~--------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~-----~~~~~  446 (463)
                      ||++|+||||++...        ....++|||+|+|+|+|++||.+|+++++++|+++|++++.++....     .....
T Consensus       414 dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  493 (517)
T PLN02687        414 DPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGL  493 (517)
T ss_pred             CcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccce
Confidence            999999999996432        23578999999999999999999999999999999999987653211     12345


Q ss_pred             eeccCCCceEEEeecC
Q 012459          447 SMQPQHGAHILFSRIH  462 (463)
Q Consensus       447 ~~~p~~~~~~~~~~r~  462 (463)
                      +..|..++.+++++|.
T Consensus       494 ~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        494 TLQRAVPLMVHPRPRL  509 (517)
T ss_pred             eeecCCCeEEeeccCC
Confidence            5566677888888874


No 15 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5.4e-69  Score=524.25  Aligned_cols=390  Identities=23%  Similarity=0.326  Sum_probs=319.6

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      ...||||+++|++||++++..                  ++++.++.+++++||++|++++++.++|+++||+++++|+.
T Consensus        34 ~~~Ppgp~~~P~iG~~~~~~~------------------~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~   95 (463)
T PLN02196         34 LPLPPGTMGWPYVGETFQLYS------------------QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLV   95 (463)
T ss_pred             CCCCCCCCCCCccchHHHHHh------------------cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHh
Confidence            346777778999999887643                  36788999999999999999999999999999999999998


Q ss_pred             cCCCCccccCccchhhhhcc-CcccccCChhHHHhhhhccCCCcHHHhhhhhhHHHhhHHHHH-----------------
Q 012459          123 DTSGSFEKIGFNPLSRQLFG-QGLVGLTGDKWAIHRRISNQAFNMERVKGWVPDIVASPRRCL-----------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~g-~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~-----------------  184 (463)
                      ++...|.. ..........| .++++.+|+.|+++|+++++.|+..+++.+.+.+.+.+.+++                 
T Consensus        96 ~~~~~~~~-~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~v~~~~~~~~~  174 (463)
T PLN02196         96 TKSHLFKP-TFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWEGTQINTYQEMKTY  174 (463)
T ss_pred             CCCCcccc-cCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCCCCeEEeHHHHHHH
Confidence            66665632 22223333455 478889999999999999999999999999999888887766                 


Q ss_pred             --------Hhccccccccccc---------cch-hhcccCCchhHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHH
Q 012459          185 --------RIGKKLEEGEMNL---------KLM-CIKFLPTKKNRERQRLESETRESIRMLIKNNGKTRESSRNLLSLLM  246 (463)
Q Consensus       185 --------~fG~~~~~~~~~l---------~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l  246 (463)
                              +||.+.......+         .+. ....+|....++..++.+.+.+++.+.++++++...+.    .|++
T Consensus       175 ~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~~~----~d~l  250 (463)
T PLN02196        175 TFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNGSSH----NDLL  250 (463)
T ss_pred             HHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCCCc----ccHH
Confidence                    5665532111111         000 00123333345566777888888888888765543222    5778


Q ss_pred             HhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC---CCcchHHhhccCh
Q 012459          247 SSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCGD---NDLRLAEKLSDLK  323 (463)
Q Consensus       247 ~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~l~  323 (463)
                      +.+++.   +..++++++.++++++++||+|||+++++|++++|++||++|+|+++||+++.+.   ++.++.++++++|
T Consensus       251 ~~ll~~---~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~  327 (463)
T PLN02196        251 GSFMGD---KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMP  327 (463)
T ss_pred             HHHHhc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcCh
Confidence            777753   2458999999999999999999999999999999999999999999999998863   3568899999999


Q ss_pred             hHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcCCCccccccC
Q 012459          324 IVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRKHLASFFPFG  403 (463)
Q Consensus       324 ~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~~~~~~~~Fg  403 (463)
                      |++|||+|+||++|+++...|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||++. .....++|||
T Consensus       328 yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~-~dP~~F~PeRfl~~-~~~~~~lpFG  405 (463)
T PLN02196        328 LTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIF-SDPGKFDPSRFEVA-PKPNTFMPFG  405 (463)
T ss_pred             HHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhc-CCcCccChhhhcCC-CCCCcccCcC
Confidence            999999999999999998779999999999999999999999999999999999 99999999999963 3456899999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeeccCCCceEEEeec
Q 012459          404 LGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQPQHGAHILFSRI  461 (463)
Q Consensus       404 ~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  461 (463)
                      .|+|.|+|++||++|++++++.|+++|++++.++.. ......+..|+++++|+++++
T Consensus       406 ~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        406 NGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN-GIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC-ceEEcccccCCCCceEEEecC
Confidence            999999999999999999999999999999876543 344555678999999999875


No 16 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=7.8e-69  Score=530.28  Aligned_cols=400  Identities=21%  Similarity=0.317  Sum_probs=304.4

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      .+.||||+++|++|+++++..                  ...+..+.+|+++||++|++++|+.++|+++||+.+++++.
T Consensus        29 ~~~pPgp~~~p~~g~l~~~~~------------------~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~   90 (503)
T PLN02394         29 LKLPPGPAAVPIFGNWLQVGD------------------DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLH   90 (503)
T ss_pred             CCCCcCCCCCCeeeeHHhcCC------------------CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHH
Confidence            347899999999999976542                  12456889999999999999999999999999999999998


Q ss_pred             cCCCCccccCccchhhhhccC---cccccCChhHHHhhhhcc-CCCcHHHhhhhhhHHHhhHHHHH--------------
Q 012459          123 DTSGSFEKIGFNPLSRQLFGQ---GLVGLTGDKWAIHRRISN-QAFNMERVKGWVPDIVASPRRCL--------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~g~---~l~~~~~~~w~~~R~~~~-~~f~~~~l~~~~~~~~~~~~~~~--------------  184 (463)
                      +++..|.+++.......+.|.   +++..+|++|+++|+++. +.|+..+++.+.+.+++++++++              
T Consensus        91 ~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v  170 (503)
T PLN02394         91 TQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGV  170 (503)
T ss_pred             hCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcE
Confidence            666677766544333334343   367788999999999986 88998888888777766665554              


Q ss_pred             -----------------Hhccccccccccc----------c--------chhhcccCC------chhHHHHHHHHHHHH-
Q 012459          185 -----------------RIGKKLEEGEMNL----------K--------LMCIKFLPT------KKNRERQRLESETRE-  222 (463)
Q Consensus       185 -----------------~fG~~~~~~~~~l----------~--------~~~~~~~p~------~~~~~~~~~~~~~~~-  222 (463)
                                       +||..++..+...          .        ......+|.      ...+..........+ 
T Consensus       171 ~~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (503)
T PLN02394        171 VIRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLAL  250 (503)
T ss_pred             ecHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHH
Confidence                             5666553221110          0        000011111      000111111111111 


Q ss_pred             HHHHHHHhcCcccc---chhhHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHH
Q 012459          223 SIRMLIKNNGKTRE---SSRNLLSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIK  299 (463)
Q Consensus       223 ~~~~~i~~~~~~~~---~~~~~~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~  299 (463)
                      +....++++++...   ...+...|+++.+++..++ +.++++++..++.++++||+|||+++++|++++|++||++|+|
T Consensus       251 ~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~k  329 (503)
T PLN02394        251 FKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKK-GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKK  329 (503)
T ss_pred             HHHHHHHHHHHHhhhccCCcchhhhHHHHHHhcccc-CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHH
Confidence            22223443332110   0111236888888876543 4589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhccCCCCcc
Q 012459          300 AREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWG  378 (463)
Q Consensus       300 l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g  378 (463)
                      +++||+++++.++.++.+++++||||+|||+|+||++|++|. ++|.+.+|++++||.|||||.|.++.+++||||++| 
T Consensus       330 l~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~-  408 (503)
T PLN02394        330 LRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELW-  408 (503)
T ss_pred             HHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccC-
Confidence            999999999876778899999999999999999999999996 579999999999999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCCcC------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCC-CCC--ce-eeee
Q 012459          379 EDANEFNPLRFNESRK------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYV-HAP--ML-FISM  448 (463)
Q Consensus       379 ~~p~~F~P~R~~~~~~------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~-~~~--~~-~~~~  448 (463)
                      +||++|+||||++.++      ....++|||+|+|+|+|++||.+|+++++|+|+++|++++.++.+ ..+  .. +++.
T Consensus       409 ~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  488 (503)
T PLN02394        409 KNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSL  488 (503)
T ss_pred             CCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceee
Confidence            9999999999986432      245799999999999999999999999999999999999876642 222  23 3566


Q ss_pred             ccCCCceEEEeecC
Q 012459          449 QPQHGAHILFSRIH  462 (463)
Q Consensus       449 ~p~~~~~~~~~~r~  462 (463)
                      ..+..+.|++.+|.
T Consensus       489 ~~~~~~~~~~~~r~  502 (503)
T PLN02394        489 HIAKHSTVVFKPRS  502 (503)
T ss_pred             ccCCCceEEeecCC
Confidence            45567999999985


No 17 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=8.1e-69  Score=531.03  Aligned_cols=399  Identities=20%  Similarity=0.305  Sum_probs=309.7

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHh---CCcEEeccCCcceEEeCCHHHHHHH
Q 012459           44 QGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMY---GKTFLYWFGSKPRLAISDPDMIKEV  120 (463)
Q Consensus        44 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ky---G~v~~~~~g~~~~vvv~dp~~v~~v  120 (463)
                      +++|||+++|++||++.+..                    .+..+.+|.++|   |++|++++|+.+.++++||+++++|
T Consensus        30 ~~~pgp~~~p~~G~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~i   89 (516)
T PLN03195         30 RNRKGPKSWPIIGAALEQLK--------------------NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHV   89 (516)
T ss_pred             cccCCCCCCCeecchHHHHh--------------------ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHH
Confidence            46899999999999876543                    112456777777   8999999999999999999999999


Q ss_pred             HhcCCCCccccCccc-hhhhhccCcccccCChhHHHhhhhccCCCcHHHhhhhhhHH-HhhHHHHH--------------
Q 012459          121 LMDTSGSFEKIGFNP-LSRQLFGQGLVGLTGDKWAIHRRISNQAFNMERVKGWVPDI-VASPRRCL--------------  184 (463)
Q Consensus       121 l~~~~~~~~~~~~~~-~~~~~~g~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~-~~~~~~~~--------------  184 (463)
                      +.++...|.++..+. ....+.|.++++.+|+.|+++|+++++.|+..+++.+.+.+ .+.++.+.              
T Consensus        90 l~~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd  169 (516)
T PLN03195         90 LKTNFANYPKGEVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVD  169 (516)
T ss_pred             HhhCccccCCcHhHHHHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEc
Confidence            985555676654332 33345678888899999999999999999999988877765 22222221              


Q ss_pred             ----------------Hhccccccccc-----cc--------cc-------hhhc---ccCCchhHHHHHHHHHHHHHHH
Q 012459          185 ----------------RIGKKLEEGEM-----NL--------KL-------MCIK---FLPTKKNRERQRLESETRESIR  225 (463)
Q Consensus       185 ----------------~fG~~~~~~~~-----~l--------~~-------~~~~---~~p~~~~~~~~~~~~~~~~~~~  225 (463)
                                      +||.+++..+.     .+        ..       +.+.   .++....+...+....+.+++.
T Consensus       170 ~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (516)
T PLN03195        170 MQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTY  249 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHH
Confidence                            57776543211     11        00       1000   0111112233445666777777


Q ss_pred             HHHHhcCccccc----hhhHHHHHHHhccccCCC-CCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHH
Q 012459          226 MLIKNNGKTRES----SRNLLSLLMSSCKNHDGQ-EERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKA  300 (463)
Q Consensus       226 ~~i~~~~~~~~~----~~~~~~~~l~~l~~~~~~-~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l  300 (463)
                      +.++++++....    .+....|+++.+++..++ +..++++++.++++++++||+|||+++++|++++|++||++|+|+
T Consensus       250 ~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl  329 (516)
T PLN03195        250 SVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKL  329 (516)
T ss_pred             HHHHHHHHHHhccccccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHH
Confidence            777665433111    001125788888865432 346999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCC--------------------CCcchHHhhccChhHHHHHHhhhcCCCCccccccccccceee-CCeeeCC
Q 012459          301 REEVFQVCGD--------------------NDLRLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKL-GNLDVPA  359 (463)
Q Consensus       301 ~~Ei~~~~~~--------------------~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l-~g~~ip~  359 (463)
                      ++||++++++                    ++.++.++++++|||+|||+||||++|++|...|.+.+|.++ +||.|||
T Consensus       330 ~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~Ipk  409 (516)
T PLN03195        330 YSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKA  409 (516)
T ss_pred             HHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECC
Confidence            9999998642                    245789999999999999999999999999877878887766 9999999


Q ss_pred             CCEEEEccchhccCCCCccCCCCCCCCCCCCCCc----CCCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeC
Q 012459          360 GTQLYIALTAVHHDTDLWGEDANEFNPLRFNESR----KHLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLS  435 (463)
Q Consensus       360 G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~----~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~  435 (463)
                      ||.|.++.+++||||++||+||++|+||||++..    ..+..|+|||+|+|+|+|++||++|++++++.|+++|++++.
T Consensus       410 Gt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~  489 (516)
T PLN03195        410 GGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLV  489 (516)
T ss_pred             CCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEec
Confidence            9999999999999999999999999999999643    244579999999999999999999999999999999999987


Q ss_pred             CCCCCCCceeeeeccCCCceEEEeecC
Q 012459          436 PSYVHAPMLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       436 ~~~~~~~~~~~~~~p~~~~~~~~~~r~  462 (463)
                      ++.+.......+..|.+|++|++++|.
T Consensus       490 ~~~~~~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        490 PGHPVKYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             CCCcceeeeeeEEecCCCEEEEEEeCC
Confidence            654434444567889999999999984


No 18 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.3e-67  Score=521.36  Aligned_cols=403  Identities=21%  Similarity=0.353  Sum_probs=318.7

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCC--cEEeccCCcceEEeCCHHHHHHH
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGK--TFLYWFGSKPRLAISDPDMIKEV  120 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~--v~~~~~g~~~~vvv~dp~~v~~v  120 (463)
                      .+.||||+++|++|+++++...++              .+++++++.++++|||+  +|++++++.+.|+++||+++++|
T Consensus        41 ~~lpPgp~~~PilG~l~~~~~~~~--------------~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~v  106 (490)
T PLN02302         41 PPLPPGDLGWPVIGNMWSFLRAFK--------------SSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRV  106 (490)
T ss_pred             CCCcCCCCCCCccccHHHHHHhcc--------------cCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHH
Confidence            346799999999999998764211              13577889999999997  79999999999999999999999


Q ss_pred             HhcCCCCccccCccchhhhhccC-cccccCChhHHHhhhhccCCCc-HHHhhhhhhHHHhhHHHHH--------------
Q 012459          121 LMDTSGSFEKIGFNPLSRQLFGQ-GLVGLTGDKWAIHRRISNQAFN-MERVKGWVPDIVASPRRCL--------------  184 (463)
Q Consensus       121 l~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~w~~~R~~~~~~f~-~~~l~~~~~~~~~~~~~~~--------------  184 (463)
                      +.+ .+.|.++....... .+|. +++..+|++|+++|+++++.|+ .++++.+.+.+.+.+.+++              
T Consensus       107 l~~-~~~f~~~~~~~~~~-~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~~v~~~~~  184 (490)
T PLN02302        107 LTD-DDAFEPGWPESTVE-LIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKMGEIEFLTE  184 (490)
T ss_pred             HcC-CCccccCCchhHHH-HhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCEehHHH
Confidence            984 45666553322222 3454 4566799999999999999995 6788889888888877665              


Q ss_pred             ------------Hhccccccccccc------c---c-hhhcccCCchhHHHHHHHHHHHHHHHHHHHhcCccccch-hhH
Q 012459          185 ------------RIGKKLEEGEMNL------K---L-MCIKFLPTKKNRERQRLESETRESIRMLIKNNGKTRESS-RNL  241 (463)
Q Consensus       185 ------------~fG~~~~~~~~~l------~---~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~  241 (463)
                                  +||.+.......+      .   . .....+|....+...+..+.+.+++.+.++++.+..... ...
T Consensus       185 ~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~  264 (490)
T PLN02302        185 LRKLTFKIIMYIFLSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPR  264 (490)
T ss_pred             HHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC
Confidence                        4555433211111      0   0 000122332233445566778888888877665432211 011


Q ss_pred             HHHHHHhccccCCC-CCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC----CcchH
Q 012459          242 LSLLMSSCKNHDGQ-EERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCGDN----DLRLA  316 (463)
Q Consensus       242 ~~~~l~~l~~~~~~-~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~----~~~~~  316 (463)
                      ..|+++.+++..++ +..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++++.+..    ..++.
T Consensus       265 ~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~  344 (490)
T PLN02302        265 KKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTL  344 (490)
T ss_pred             cCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence            25788888765432 34589999999999999999999999999999999999999999999999998642    23789


Q ss_pred             HhhccChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcCCC
Q 012459          317 EKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRKHL  396 (463)
Q Consensus       317 ~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~~~  396 (463)
                      ++++++||++|+|+|+||++|+++...|.+.+|++++||.||||+.|.++.+++||||++| +||++|+||||++....+
T Consensus       345 ~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~-~dP~~F~PeR~~~~~~~~  423 (490)
T PLN02302        345 KDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVY-PNPKEFDPSRWDNYTPKA  423 (490)
T ss_pred             HHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccC-CCccccChhhcCCCCCCC
Confidence            9999999999999999999999998889999999999999999999999999999999999 999999999999766566


Q ss_pred             ccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeeccCCCceEEEeecCC
Q 012459          397 ASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQPQHGAHILFSRIHN  463 (463)
Q Consensus       397 ~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~  463 (463)
                      ..++|||+|+|.|+|++||.+|+++++++|+++|++++.++.. .........|.+++++++++|++
T Consensus       424 ~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        424 GTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVMYLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cceeCCCCCCCCCceEEEEeccC
Confidence            7899999999999999999999999999999999999875432 22334458999999999999874


No 19 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=6.4e-68  Score=515.98  Aligned_cols=399  Identities=19%  Similarity=0.252  Sum_probs=316.1

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      ++.||||+++|++||++.+...              ....+++.++.+|.++||+||++++|+.++++++||++++++|.
T Consensus         6 ~~~Ppg~~~~P~iG~~~~l~~~--------------~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~   71 (452)
T PLN03141          6 SRLPKGSLGWPVIGETLDFISC--------------AYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQ   71 (452)
T ss_pred             CCCCCCCCCCCchhhHHHHHhh--------------cccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHh
Confidence            3457899999999999987531              00125778999999999999999999999999999999999998


Q ss_pred             cCCCCccccCccchhhhhccC-cccccCChhHHHhhhhccCCCcHHHhhhh-hhHHHhhHHHHH----------------
Q 012459          123 DTSGSFEKIGFNPLSRQLFGQ-GLVGLTGDKWAIHRRISNQAFNMERVKGW-VPDIVASPRRCL----------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~w~~~R~~~~~~f~~~~l~~~-~~~~~~~~~~~~----------------  184 (463)
                      +++..|..+.. .....++|. ++++.+|+.|+++|+++++.|+..++... .+.+.+.+.+.+                
T Consensus        72 ~~~~~~~~~~~-~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (452)
T PLN03141         72 SDGNAFVPAYP-KSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETK  150 (452)
T ss_pred             CCCCeeeccCc-hhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHH
Confidence            77777765432 233344554 58888999999999999999987766543 333333333222                


Q ss_pred             ----------Hhccccccccccc------cch----hhcccCCchhHHHHHHHHHHHHHHHHHHHhcCccccchh----h
Q 012459          185 ----------RIGKKLEEGEMNL------KLM----CIKFLPTKKNRERQRLESETRESIRMLIKNNGKTRESSR----N  240 (463)
Q Consensus       185 ----------~fG~~~~~~~~~l------~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~  240 (463)
                                +||.........+      ...    ...++|.....+..++.+++.+++.+++++++...+...    .
T Consensus       151 ~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  230 (452)
T PLN03141        151 KIAFEVLVKALISLEPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETG  230 (452)
T ss_pred             HHHHHHHHHHHcCCCchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccC
Confidence                      4564432111111      000    001234333344556778888888888877654432110    0


Q ss_pred             HHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhC----CCCcchH
Q 012459          241 LLSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCG----DNDLRLA  316 (463)
Q Consensus       241 ~~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~----~~~~~~~  316 (463)
                      ...|+++.+++..  +..++++++..+++++++||+|||+.+++|++++|++||++|+++++||+++.+    .++.++.
T Consensus       231 ~~~d~l~~ll~~~--~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~  308 (452)
T PLN03141        231 IPKDVVDVLLRDG--SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYW  308 (452)
T ss_pred             ChhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCH
Confidence            1267888888653  245899999999999999999999999999999999999999999999998863    2345789


Q ss_pred             HhhccChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcCCC
Q 012459          317 EKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRKHL  396 (463)
Q Consensus       317 ~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~~~  396 (463)
                      +++.++||++|||+|++|++|+++.++|.+.+|++++||.||||+.|+++.+++|+||++| +||++|+||||++.+..+
T Consensus       309 ~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~-~dP~~F~PeRfl~~~~~~  387 (452)
T PLN03141        309 TDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENY-DNPYQFNPWRWQEKDMNN  387 (452)
T ss_pred             HHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhc-CCccccCcccccCCCCCC
Confidence            9999999999999999999999988889999999999999999999999999999999999 999999999999865566


Q ss_pred             ccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeeccCCCceEEEeecC
Q 012459          397 ASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       397 ~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  462 (463)
                      ..|+|||+|+|.|+|++||.+|+++++++|+++|++++.++..   ....+++|.+++.|++++|+
T Consensus       388 ~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  450 (452)
T PLN03141        388 SSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTI---VNFPTVRMKRKLPIWVTRID  450 (452)
T ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCe---eecccccCCCCceEEEEeCC
Confidence            7899999999999999999999999999999999999776532   23458899999999999996


No 20 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.5e-67  Score=522.23  Aligned_cols=400  Identities=19%  Similarity=0.301  Sum_probs=315.9

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      .+.||||+++|++||++++..                   +++.++.+|++|||++|++++|+.++++++||+++++|+.
T Consensus        31 ~~~ppgp~~~pl~G~~~~~~~-------------------~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~   91 (514)
T PLN03112         31 LRLPPGPPRWPIVGNLLQLGP-------------------LPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILL   91 (514)
T ss_pred             CCCccCCCCCCeeeeHHhcCC-------------------chHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHH
Confidence            356899999999999986632                   4677899999999999999999999999999999999998


Q ss_pred             cCCCCccccCccch-hhhhccC--cccccCChhHHHhhhhc-cCCCcHHHhhhhhhHHHhhHHHHH--------------
Q 012459          123 DTSGSFEKIGFNPL-SRQLFGQ--GLVGLTGDKWAIHRRIS-NQAFNMERVKGWVPDIVASPRRCL--------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~~-~~~~~g~--~l~~~~~~~w~~~R~~~-~~~f~~~~l~~~~~~~~~~~~~~~--------------  184 (463)
                      ++++.|++++.... ....+|.  +++..+|+.|+++|+++ .+.|+.++++.+.+.+.+.++.++              
T Consensus        92 ~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd  171 (514)
T PLN03112         92 RQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVN  171 (514)
T ss_pred             hCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeee
Confidence            77778888765432 2223333  34567899999999995 468999999988887766666554              


Q ss_pred             ----------------Hhccccccc-----c--ccc------------------cchhhcccCC-chhHHHHHHHHHHHH
Q 012459          185 ----------------RIGKKLEEG-----E--MNL------------------KLMCIKFLPT-KKNRERQRLESETRE  222 (463)
Q Consensus       185 ----------------~fG~~~~~~-----~--~~l------------------~~~~~~~~p~-~~~~~~~~~~~~~~~  222 (463)
                                      +||.++...     +  ..+                  .+|.+.+++. ...+...+..+.+.+
T Consensus       172 ~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
T PLN03112        172 LREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDE  251 (514)
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHH
Confidence                            567654210     0  000                  0122222211 123445556667777


Q ss_pred             HHHHHHHhcCccccch--hhHHHHHHHhccccCCCC--CCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHH
Q 012459          223 SIRMLIKNNGKTRESS--RNLLSLLMSSCKNHDGQE--ERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQI  298 (463)
Q Consensus       223 ~~~~~i~~~~~~~~~~--~~~~~~~l~~l~~~~~~~--~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~  298 (463)
                      ++.+.++++++..+..  .....|+++.+++..+++  ..++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       252 ~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~  331 (514)
T PLN03112        252 FHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLR  331 (514)
T ss_pred             HHHHHHHHHHHhhcccccCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHH
Confidence            7777776654432110  011258888888753322  258999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhccCCCCc
Q 012459          299 KAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLW  377 (463)
Q Consensus       299 ~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~  377 (463)
                      |+++||++++++++.++.+++++|||++|||+|++|++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++|
T Consensus       332 kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~  411 (514)
T PLN03112        332 KIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIW  411 (514)
T ss_pred             HHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccC
Confidence            9999999999877778999999999999999999999999996 689999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCcC--------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCC-----CCce
Q 012459          378 GEDANEFNPLRFNESRK--------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVH-----APML  444 (463)
Q Consensus       378 g~~p~~F~P~R~~~~~~--------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~-----~~~~  444 (463)
                       +||++|+||||.+...        ....++|||+|+|+|+|++||.+|+++++++|+++|++++.++...     ....
T Consensus       412 -~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  490 (514)
T PLN03112        412 -DDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVY  490 (514)
T ss_pred             -CChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCcccc
Confidence             9999999999865321        2357999999999999999999999999999999999998754211     1123


Q ss_pred             eeeeccCCCceEEEeecC
Q 012459          445 FISMQPQHGAHILFSRIH  462 (463)
Q Consensus       445 ~~~~~p~~~~~~~~~~r~  462 (463)
                      ++++.+.+++.+++.+|.
T Consensus       491 ~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        491 GMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             CcccccCCCeEEEeecCC
Confidence            566667889999999985


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=2.5e-68  Score=524.45  Aligned_cols=394  Identities=34%  Similarity=0.511  Sum_probs=323.4

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHhcCC
Q 012459           46 VGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMDTS  125 (463)
Q Consensus        46 ~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~~~  125 (463)
                      ||||+++|++||++.+.+                 .++++.++.+|+++||+||++++++.++++|+||+.+++|+.+++
T Consensus         1 Ppgp~~~p~~G~~~~~~~-----------------~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~   63 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-----------------KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRS   63 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-----------------THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTT
T ss_pred             CcCCCCcCceeEHHHhcC-----------------CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccc
Confidence            799999999999999873                 135788899999999999999999999999999999999999766


Q ss_pred             CCccccCccchh----hhhccCcccccCChhHHHhhhhccCCCcHH-HhhhhhhHHHhhHHHHH----------------
Q 012459          126 GSFEKIGFNPLS----RQLFGQGLVGLTGDKWAIHRRISNQAFNME-RVKGWVPDIVASPRRCL----------------  184 (463)
Q Consensus       126 ~~~~~~~~~~~~----~~~~g~~l~~~~~~~w~~~R~~~~~~f~~~-~l~~~~~~~~~~~~~~~----------------  184 (463)
                      ..++.++.....    ....+.++++.+++.|+.+|+++++.|+.. .+ .+.+.+.+.++.++                
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~  142 (463)
T PF00067_consen   64 KYFSFRPRPPWFEIFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLF  142 (463)
T ss_dssp             TTEEEEHCHHHHHHHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccceeeee
Confidence            677776443322    246678899999999999999999999988 66 78888777777666                


Q ss_pred             --------------Hhcccccccccc----c--------------------cchhhcccCCchhHHHHHHHHHHHHHHHH
Q 012459          185 --------------RIGKKLEEGEMN----L--------------------KLMCIKFLPTKKNRERQRLESETRESIRM  226 (463)
Q Consensus       185 --------------~fG~~~~~~~~~----l--------------------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  226 (463)
                                    +||..++..+..    +                    .+|++.+++....+...++.+.+.+++.+
T Consensus       143 ~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (463)
T PF00067_consen  143 DWLRRFALDVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKE  222 (463)
T ss_dssp             HHHHHHHHHHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccceeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                          577765411110    0                    22333455555666677777888888988


Q ss_pred             HHHhcCccccchhhHHHHHHHhccccC--CCC-CCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHH
Q 012459          227 LIKNNGKTRESSRNLLSLLMSSCKNHD--GQE-ERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREE  303 (463)
Q Consensus       227 ~i~~~~~~~~~~~~~~~~~l~~l~~~~--~~~-~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  303 (463)
                      +++++++..........|+++.++...  .++ ..++++++.+++..+++||+|||+.+++|++++|++||++|+|+++|
T Consensus       223 ~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~E  302 (463)
T PF00067_consen  223 IIEERREELDDGDESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREE  302 (463)
T ss_dssp             HHHHHHHSHHSSSSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            888877655433111156666666653  223 37999999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCcc-ccccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCCC
Q 012459          304 VFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAV-MLMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDAN  382 (463)
Q Consensus       304 i~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~  382 (463)
                      |+++.++++.++.++++++|||+|||+||||++|+++ .++|.+.+|++++||.|||||.|+++.+++|+||++| +||+
T Consensus       303 i~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~-~dp~  381 (463)
T PF00067_consen  303 IDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYF-PDPD  381 (463)
T ss_dssp             HHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTS-SSTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence            9999987778999999999999999999999999999 7899999999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCCCcC----CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCcee--eeeccCCCceE
Q 012459          383 EFNPLRFNESRK----HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLF--ISMQPQHGAHI  456 (463)
Q Consensus       383 ~F~P~R~~~~~~----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~--~~~~p~~~~~~  456 (463)
                      +|+||||++.+.    ....|+|||.|+|.|+|++||..|+++++++|+++||+++.++....+...  .++.|..+..|
T Consensus       382 ~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (463)
T PF00067_consen  382 EFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKV  461 (463)
T ss_dssp             S--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEE
T ss_pred             ccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEE
Confidence            999999998753    678899999999999999999999999999999999999976654444332  35666666776


Q ss_pred             EE
Q 012459          457 LF  458 (463)
Q Consensus       457 ~~  458 (463)
                      +|
T Consensus       462 ~~  463 (463)
T PF00067_consen  462 KF  463 (463)
T ss_dssp             EE
T ss_pred             eC
Confidence            54


No 22 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=2e-67  Score=518.88  Aligned_cols=376  Identities=22%  Similarity=0.349  Sum_probs=292.6

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHhc
Q 012459           44 QGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMD  123 (463)
Q Consensus        44 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~  123 (463)
                      +.||||+++|++||++++..                  .+++.++.+|+++||++|++++|+.++++++||+++++|+.+
T Consensus        29 ~~ppgp~~~p~~G~l~~l~~------------------~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~   90 (502)
T PLN02966         29 KLPPGPSPLPVIGNLLQLQK------------------LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKT   90 (502)
T ss_pred             CCCcCCCCCCeeccHHhcCC------------------CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHh
Confidence            46899999999999986632                  257789999999999999999999999999999999999986


Q ss_pred             CCCCccccCccchhhhh-ccC-cc-cccCChhHHHhhhh-ccCCCcHHHhhhhhhHHHhhHHHHH---------------
Q 012459          124 TSGSFEKIGFNPLSRQL-FGQ-GL-VGLTGDKWAIHRRI-SNQAFNMERVKGWVPDIVASPRRCL---------------  184 (463)
Q Consensus       124 ~~~~~~~~~~~~~~~~~-~g~-~l-~~~~~~~w~~~R~~-~~~~f~~~~l~~~~~~~~~~~~~~~---------------  184 (463)
                      ++..|.+++........ .+. ++ +..+|+.|+++|++ +++.|+..+++.+.+.+.+.+.+++               
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl  170 (502)
T PLN02966         91 QDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDI  170 (502)
T ss_pred             CcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeH
Confidence            66677765543321111 222 23 44679999999998 8889999999888888877776665               


Q ss_pred             ---------------Hhccccccccccc---------------------cchhhcccCC-ch-hHHHHHHHHHHHHHHHH
Q 012459          185 ---------------RIGKKLEEGEMNL---------------------KLMCIKFLPT-KK-NRERQRLESETRESIRM  226 (463)
Q Consensus       185 ---------------~fG~~~~~~~~~l---------------------~~~~~~~~p~-~~-~~~~~~~~~~~~~~~~~  226 (463)
                                     +||.+++......                     .+|.+..++. .. .+......+...+++.+
T Consensus       171 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (502)
T PLN02966        171 SELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQE  250 (502)
T ss_pred             HHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHH
Confidence                           5777654322111                     0111111110 00 11122334445555555


Q ss_pred             HHHhcCccccchhhHHHHHHHhccccCCC---CCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHH
Q 012459          227 LIKNNGKTRESSRNLLSLLMSSCKNHDGQ---EERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREE  303 (463)
Q Consensus       227 ~i~~~~~~~~~~~~~~~~~l~~l~~~~~~---~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~E  303 (463)
                      .++++........ ..+++++.+++..++   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       251 ~i~~~~~~~~~~~-~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~E  329 (502)
T PLN02966        251 VVNETLDPKRVKP-ETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAE  329 (502)
T ss_pred             HHHHHHhcccccc-ccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            5554322111100 114666666644322   245899999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCC--CcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhccCCCCccCC
Q 012459          304 VFQVCGDN--DLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGED  380 (463)
Q Consensus       304 i~~~~~~~--~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~  380 (463)
                      |+++++++  +.++.+++++|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++++++||||++||+|
T Consensus       330 i~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~d  409 (502)
T PLN02966        330 VREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPN  409 (502)
T ss_pred             HHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCC
Confidence            99998743  357899999999999999999999999996 689999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcC----CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCC
Q 012459          381 ANEFNPLRFNESRK----HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSY  438 (463)
Q Consensus       381 p~~F~P~R~~~~~~----~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~  438 (463)
                      |++|+||||++++.    ....|+|||+|+|+|+|++||.+|+++++|+|+++|+|++.++.
T Consensus       410 P~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        410 PDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             hhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence            99999999996532    35679999999999999999999999999999999999987764


No 23 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5e-67  Score=468.47  Aligned_cols=394  Identities=21%  Similarity=0.288  Sum_probs=335.8

Q ss_pred             cCCCCCCC-CCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           44 QGVGGPGY-RLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        44 ~~~pgP~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      +.||.-++ +||+|++..|.+                   +|.+++++..+|||+||++.++|+.+.++.+|+....++.
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk-------------------~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~   91 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGK-------------------DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFK   91 (486)
T ss_pred             CCCcccccCcchhhHHHHhcc-------------------CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHc
Confidence            46777764 799999999885                   7999999999999999999999999999999999999998


Q ss_pred             cCCCCccccCccc-hhhhhccCcccc-cCChhHHHhhhhccCCCcHHHhhhhhhHHHhhHHHHH----------------
Q 012459          123 DTSGSFEKIGFNP-LSRQLFGQGLVG-LTGDKWAIHRRISNQAFNMERVKGWVPDIVASPRRCL----------------  184 (463)
Q Consensus       123 ~~~~~~~~~~~~~-~~~~~~g~~l~~-~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~----------------  184 (463)
                      .....++....+. +....||.|+.. .++....++.+++..++...+++++.+.|.+++.+.+                
T Consensus        92 ~~~~~ld~~~~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~  171 (486)
T KOG0684|consen   92 AKLADLDFEEAYSKLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTF  171 (486)
T ss_pred             CcccccCHHHHHHHhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhh
Confidence            5545666655553 667789988765 6788888999999999999999999999998887776                


Q ss_pred             ------------Hhcccccccccc-------c---------cchhhcccCCchhHHHHHHHHHHHHHHHHHHHhcCcccc
Q 012459          185 ------------RIGKKLEEGEMN-------L---------KLMCIKFLPTKKNRERQRLESETRESIRMLIKNNGKTRE  236 (463)
Q Consensus       185 ------------~fG~~~~~~~~~-------l---------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  236 (463)
                                  .+|...+..+.+       +         .+|.  .+|....+...++++++.+.+..++.++++..+
T Consensus       172 ~~~ii~tAs~~ll~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~--~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s  249 (486)
T KOG0684|consen  172 CRLIIFTASRLLLGGEVRDQLDADVAKLYHDLDQGFQPFDFLFPY--NLPIPLLRRRDRARKKISKIFSKIILDRRASIS  249 (486)
T ss_pred             hHHHhhhhHHHhhhhhhhhhhcchHHHHHHHHhccccchHhhccc--CCCcchhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence                        333333321111       1         2232  677777888889999999999999999888775


Q ss_pred             chhhHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCc-ch
Q 012459          237 SSRNLLSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCGDNDL-RL  315 (463)
Q Consensus       237 ~~~~~~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~~  315 (463)
                      ..   +.|+++.+++.-+.+.+.+++|+....+.++|||..||+.+.+|++++|++|||+++.+++|++.++|.+.. ++
T Consensus       250 ~~---~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~  326 (486)
T KOG0684|consen  250 KW---DNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLT  326 (486)
T ss_pred             cc---cHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCC
Confidence            43   167888887733445679999999999999999999999999999999999999999999999999987654 99


Q ss_pred             HHhhccChhHHHHHHhhhcCCCCccccccccccceeeCC----eeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCC
Q 012459          316 AEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLGN----LDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNE  391 (463)
Q Consensus       316 ~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g----~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~  391 (463)
                      .+.++++|+|++||+|||||+||.+.+.|.+.+|.++-+    |.||+|+.|.++...+|+||++| +||++|+|+||++
T Consensus       327 ~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif-~dp~~Fk~dRf~~  405 (486)
T KOG0684|consen  327 YDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIF-PDPEDFKPDRFLK  405 (486)
T ss_pred             HHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCcccc-CChhhCChhhccC
Confidence            999999999999999999999999998899999999954    99999999999999999999999 9999999999996


Q ss_pred             CcCC--------CccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCC-CCCCceeeeeccCCCceEEEeecC
Q 012459          392 SRKH--------LASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSY-VHAPMLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       392 ~~~~--------~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~r~  462 (463)
                      ++++        .+.+||||+|.|.|||+.||.+|+|+++..+|+.||+++.++. ++..-...++.|.+.|.+|.++|+
T Consensus       406 ~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  406 DNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence            6541        2457999999999999999999999999999999999999863 222222448899999999999986


No 24 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=7.4e-67  Score=510.10  Aligned_cols=393  Identities=21%  Similarity=0.319  Sum_probs=304.1

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHhcCC
Q 012459           46 VGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMDTS  125 (463)
Q Consensus        46 ~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~~~  125 (463)
                      ||||+++|++||++++..                  .+++.++.+|+++||++|++++|+.++++|+||+++++++.++.
T Consensus         1 ppgp~~lP~iG~l~~~~~------------------~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~   62 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE------------------KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKF   62 (466)
T ss_pred             CcCCCCCCccccHHHcCC------------------CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcC
Confidence            689999999999987742                  24678999999999999999999999999999999999999778


Q ss_pred             CCccccCccchhhhhccCc--cccc-CChhHHHhhhhccCC-CcHHHhhhhhhHHHhhHHHHH-----------------
Q 012459          126 GSFEKIGFNPLSRQLFGQG--LVGL-TGDKWAIHRRISNQA-FNMERVKGWVPDIVASPRRCL-----------------  184 (463)
Q Consensus       126 ~~~~~~~~~~~~~~~~g~~--l~~~-~~~~w~~~R~~~~~~-f~~~~l~~~~~~~~~~~~~~~-----------------  184 (463)
                      ..|++++.......+.+++  ++.. +|+.|+++|+++.+. |+..+++.+.+.+.+.++.++                 
T Consensus        63 ~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~  142 (466)
T PLN02655         63 SSISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNF  142 (466)
T ss_pred             chhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeH
Confidence            8888876554444344433  4444 589999999866554 555554544443332222222                 


Q ss_pred             ---------------Hhcccccccc-----------ccc------------------cchhhcccCCchh-HHHHHHHHH
Q 012459          185 ---------------RIGKKLEEGE-----------MNL------------------KLMCIKFLPTKKN-RERQRLESE  219 (463)
Q Consensus       185 ---------------~fG~~~~~~~-----------~~l------------------~~~~~~~~p~~~~-~~~~~~~~~  219 (463)
                                     +||.+.+...           ..+                  .+|.+.+++.... +...+....
T Consensus       143 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~  222 (466)
T PLN02655        143 RDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFR  222 (466)
T ss_pred             HHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHH
Confidence                           5676543211           000                  1121222232111 122222333


Q ss_pred             HHHHHHHHHHhcCccccchhhHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHH
Q 012459          220 TRESIRMLIKNNGKTRESSRNLLSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIK  299 (463)
Q Consensus       220 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~  299 (463)
                      +.+++.++++++++....+.. ..|+++.+++..   ..++++++.+++.++++||+|||+++++|++++|++||++|+|
T Consensus       223 ~~~~~~~~i~~~~~~~~~~~~-~~d~l~~ll~~~---~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~  298 (466)
T PLN02655        223 RTAVMKALIKQQKKRIARGEE-RDCYLDFLLSEA---THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQER  298 (466)
T ss_pred             HHHHHHHHHHHHHHhhcCCCC-cccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence            456666666654433211111 157888888654   3589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhccCCCCcc
Q 012459          300 AREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWG  378 (463)
Q Consensus       300 l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g  378 (463)
                      +++||+++.+++. ++.++++++||++|||+||||++|+++. .+|.+.+|++++||.|||||.|.++.+++||||++| 
T Consensus       299 l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~-  376 (466)
T PLN02655        299 LYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRW-  376 (466)
T ss_pred             HHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccC-
Confidence            9999999998654 8999999999999999999999999996 579999999999999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCCcC---CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCC-CCCCceeeeeccCCCc
Q 012459          379 EDANEFNPLRFNESRK---HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSY-VHAPMLFISMQPQHGA  454 (463)
Q Consensus       379 ~~p~~F~P~R~~~~~~---~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~  454 (463)
                      +||++|+||||++.+.   ....++|||+|+|+|+|++||..|+++++++||++|++++.++. ......++++.|++++
T Consensus       377 ~~p~~F~PeR~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  456 (466)
T PLN02655        377 ENPEEWDPERFLGEKYESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPL  456 (466)
T ss_pred             CChhccCccccCCCCcccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCc
Confidence            9999999999997543   34679999999999999999999999999999999999987653 2344557778899999


Q ss_pred             eEEEeecC
Q 012459          455 HILFSRIH  462 (463)
Q Consensus       455 ~~~~~~r~  462 (463)
                      .|++++|.
T Consensus       457 ~~~~~~r~  464 (466)
T PLN02655        457 HAHLKPRG  464 (466)
T ss_pred             EEEEeecC
Confidence            99999885


No 25 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.2e-66  Score=478.05  Aligned_cols=400  Identities=23%  Similarity=0.315  Sum_probs=338.0

Q ss_pred             HHcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEec-cCCcceEEeCCHHHHHHH
Q 012459           42 KEQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYW-FGSKPRLAISDPDMIKEV  120 (463)
Q Consensus        42 ~~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~-~g~~~~vvv~dp~~v~~v  120 (463)
                      +...||||+++|++|.++.+.+    ++           ..+.++.....+++||+||+.. +|+...|+|.+|++++.+
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~----~~-----------~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v  112 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRA----GG-----------ATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKV  112 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHh----hh-----------hhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHH
Confidence            4456899999999998875332    11           3467788999999999999999 899999999999999999


Q ss_pred             HhcCCCCccccC-ccc---hhhhhcc--CcccccCChhHHHhhhhccCCC-cHHHhhhhhhHHHhhHHHHH---------
Q 012459          121 LMDTSGSFEKIG-FNP---LSRQLFG--QGLVGLTGDKWAIHRRISNQAF-NMERVKGWVPDIVASPRRCL---------  184 (463)
Q Consensus       121 l~~~~~~~~~~~-~~~---~~~~~~g--~~l~~~~~~~w~~~R~~~~~~f-~~~~l~~~~~~~~~~~~~~~---------  184 (463)
                      ++ ++..++.++ ...   .-+..++  .|++..+|++|.+.|..+++.+ ++++++.+.+.+++.+++++         
T Consensus       113 ~r-~EG~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~  191 (519)
T KOG0159|consen  113 FR-NEGKYPFRPLLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP  191 (519)
T ss_pred             Hh-cCCCCCCcccccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence            98 556667774 222   2233444  4799999999999999999986 78899999999999988888         


Q ss_pred             ------------------------Hhccccccccc-----------------------cccchhhcccCCchhHHHHHHH
Q 012459          185 ------------------------RIGKKLEEGEM-----------------------NLKLMCIKFLPTKKNRERQRLE  217 (463)
Q Consensus       185 ------------------------~fG~~~~~~~~-----------------------~l~~~~~~~~p~~~~~~~~~~~  217 (463)
                                              +||.++.....                       .+..++++++++...++..++.
T Consensus       192 ~~~~~~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~  271 (519)
T KOG0159|consen  192 ERGELVPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAW  271 (519)
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHH
Confidence                                    45555432211                       1133677899998999998888


Q ss_pred             HHHHHHHHHHHHhcCccccchh----hHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcC
Q 012459          218 SETRESIRMLIKNNGKTRESSR----NLLSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMH  293 (463)
Q Consensus       218 ~~~~~~~~~~i~~~~~~~~~~~----~~~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~  293 (463)
                      +.+.++..+.|++..+..+..+    +....+...|.++     .++.+++...+++++.||.|||+.++.|++|+|++|
T Consensus       272 D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~-----~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~Larn  346 (519)
T KOG0159|consen  272 DQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLRK-----ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARN  346 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHc-----cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcC
Confidence            8888877777766544433221    1124455555543     488999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhCC-CCcchHHhhccChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEccchhcc
Q 012459          294 QEWQIKAREEVFQVCGD-NDLRLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIALTAVHH  372 (463)
Q Consensus       294 p~~~~~l~~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~  372 (463)
                      |++|+++++||.++..+ +..++.++++++|||+||||||+||+|.+|+..|...+|.+++||.|||||.|.++.+.+.+
T Consensus       347 P~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r  426 (519)
T KOG0159|consen  347 PEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGR  426 (519)
T ss_pred             hHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhcc
Confidence            99999999999999987 57889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCCCCCCCCCc-C--CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeec
Q 012459          373 DTDLWGEDANEFNPLRFNESR-K--HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQ  449 (463)
Q Consensus       373 dp~~~g~~p~~F~P~R~~~~~-~--~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~  449 (463)
                      ||++| ++|++|+||||+++. +  ++..++|||.|+|+|+|+++|.+|+.+++++++++|+++..+..+......+++.
T Consensus       427 ~~~~F-~~p~~F~PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~  505 (519)
T KOG0159|consen  427 NPAYF-PDPEEFLPERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILV  505 (519)
T ss_pred             ChhhC-CCccccChhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEc
Confidence            99999 999999999999877 4  7888999999999999999999999999999999999998876666777899999


Q ss_pred             cCCCceEEEeecCC
Q 012459          450 PQHGAHILFSRIHN  463 (463)
Q Consensus       450 p~~~~~~~~~~r~~  463 (463)
                      |...+.++|++|+.
T Consensus       506 P~~~l~f~f~~r~~  519 (519)
T KOG0159|consen  506 PNRPLRFKFRPRNE  519 (519)
T ss_pred             CCCCcceeeeeCCC
Confidence            99999999999873


No 26 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=2.9e-66  Score=515.18  Aligned_cols=374  Identities=25%  Similarity=0.401  Sum_probs=297.9

Q ss_pred             cchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHhcCCCCccccCccchhhhhccCcccccCChhHHHhhhhccC
Q 012459           83 RTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMDTSGSFEKIGFNPLSRQLFGQGLVGLTGDKWAIHRRISNQ  162 (463)
Q Consensus        83 ~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~w~~~R~~~~~  162 (463)
                      ..+..+.+|++|||+||++++|+.++++|+||+.+++||.++...|.++..........+.++++.+++.|+++|+++++
T Consensus       152 ~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~p  231 (633)
T PLN02738        152 AFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVP  231 (633)
T ss_pred             hHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhccH
Confidence            35567999999999999999999999999999999999986666777765443434445678888999999999999999


Q ss_pred             CCcHHHhhhhhhHHHhhHHHHH------------------------------Hhcccccccc--ccc-------------
Q 012459          163 AFNMERVKGWVPDIVASPRRCL------------------------------RIGKKLEEGE--MNL-------------  197 (463)
Q Consensus       163 ~f~~~~l~~~~~~~~~~~~~~~------------------------------~fG~~~~~~~--~~l-------------  197 (463)
                      .|+...++.+.+.+.+.++.++                              +||.+++...  +.+             
T Consensus       232 ~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~  311 (633)
T PLN02738        232 ALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAED  311 (633)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHH
Confidence            9999999999988888777666                              6777665211  111             


Q ss_pred             ----c-----chhhcccCCchhHHHHHHHHHHHHHHHHHHHhcCc-------cccc--hhhHHHHHHHhccccCCCCCCC
Q 012459          198 ----K-----LMCIKFLPTKKNRERQRLESETRESIRMLIKNNGK-------TRES--SRNLLSLLMSSCKNHDGQEERL  259 (463)
Q Consensus       198 ----~-----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~--~~~~~~~~l~~l~~~~~~~~~l  259 (463)
                          .     .+.+..++. ..+...+..+.+.+++.++++.++.       ....  ......++++.+++..   ..+
T Consensus       312 ~~~~~~~~~~~p~~~~l~~-~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~---~~l  387 (633)
T PLN02738        312 RSVSPIPVWEIPIWKDISP-RQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG---DDV  387 (633)
T ss_pred             HhhcchhhhhhhHHhhhch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC---CCC
Confidence                0     001111111 1122333344444444444432211       0000  0011257888888653   348


Q ss_pred             CHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCc
Q 012459          260 DVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPA  339 (463)
Q Consensus       260 ~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~  339 (463)
                      +++++.++++.+++||+|||+.+++|++++|++||++|+|+++||+++++ ++.++.+++++||||+|||+|+|||+|++
T Consensus       388 s~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPYL~AVIkEtLRL~p~~  466 (633)
T PLN02738        388 SSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVINESLRLYPQP  466 (633)
T ss_pred             CHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHHHHHHHHHHHhcCCCc
Confidence            99999999999999999999999999999999999999999999999998 46789999999999999999999999999


Q ss_pred             cccccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcC------CCccccccCCCCCCCcchH
Q 012459          340 VMLMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRK------HLASFFPFGLGPRVCVGQN  413 (463)
Q Consensus       340 ~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~------~~~~~~~Fg~G~r~C~G~~  413 (463)
                      +.+.|.+.+|++++||.|||||.|.++.+.+||||++| +||++|+||||+++..      ....|+|||.|+|.|+|++
T Consensus       467 p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~if-pdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~  545 (633)
T PLN02738        467 PVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHW-DDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDM  545 (633)
T ss_pred             cccceeeccCceECCEEECCCCEEEecHHHHhCCcccc-CCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHH
Confidence            98789999999999999999999999999999999999 9999999999984321      3467999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhceeeeCCCCC-CCCceeeeeccCCCceEEEeecC
Q 012459          414 LAMVEAKVVLAIIIRRFNFFLSPSYV-HAPMLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       414 lA~~~~~~~~~~ll~~f~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~r~  462 (463)
                      ||.+|++++++.|+++|+|++.++.. .....+.++.|.++++|++++|.
T Consensus       546 lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        546 FASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             HHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECC
Confidence            99999999999999999999876643 22334678889999999999985


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.1e-66  Score=504.28  Aligned_cols=398  Identities=21%  Similarity=0.290  Sum_probs=309.9

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHhc
Q 012459           44 QGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMD  123 (463)
Q Consensus        44 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~  123 (463)
                      +.||||.++|++||++++....              ...++..++.+|.++||++|++++++.++++|+||+++++++.+
T Consensus        30 ~lppgp~~~P~iG~~~~~~~~~--------------~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~   95 (472)
T PLN02987         30 RLPPGSLGLPLVGETLQLISAY--------------KTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQN   95 (472)
T ss_pred             CCcCCCcCCCchhhHHHHHhhc--------------ccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhC
Confidence            4578999999999998875310              01257778999999999999999999999999999999999987


Q ss_pred             CCCCccccCccchhhhhcc-CcccccCChhHHHhhhhccCCCcHHHhhhhh-----hHHHhhHHH-------------HH
Q 012459          124 TSGSFEKIGFNPLSRQLFG-QGLVGLTGDKWAIHRRISNQAFNMERVKGWV-----PDIVASPRR-------------CL  184 (463)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~g-~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~-----~~~~~~~~~-------------~~  184 (463)
                      +.+.|.++...... .++| .|+++.+|+.|+++|+++.+.++...++.+.     ..+....+.             +.
T Consensus        96 ~~~~f~~~~~~~~~-~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~t  174 (472)
T PLN02987         96 EGKLFECSYPGSIS-NLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWSSRVLLMEEAKKIT  174 (472)
T ss_pred             CCceEEecCcHHHH-HHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhccceehHHHHHHHH
Confidence            77778665432233 3445 5788889999999999987543443433322     111111111             00


Q ss_pred             -------Hhccccccccccc------cch-hh-cccC--CchhHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHH
Q 012459          185 -------RIGKKLEEGEMNL------KLM-CI-KFLP--TKKNRERQRLESETRESIRMLIKNNGKTRESSRNLLSLLMS  247 (463)
Q Consensus       185 -------~fG~~~~~~~~~l------~~~-~~-~~~p--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~  247 (463)
                             +||.........+      ... .. ..+|  ....++..+.++++.+++.+.++++++....+....+|+++
T Consensus       175 ~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~  254 (472)
T PLN02987        175 FELTVKQLMSFDPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLA  254 (472)
T ss_pred             HHHHHHHHcCCCChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHH
Confidence                   5665432211111      000 00 0112  12355667788889999999988876543221111268888


Q ss_pred             hccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhC---CCCcchHHhhccChh
Q 012459          248 SCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCG---DNDLRLAEKLSDLKI  324 (463)
Q Consensus       248 ~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~~~~l~~  324 (463)
                      .+++..   .+++++++.+++.++++||+|||+.+++|++++|++||++|+++++|++++.+   ++..++.++++++||
T Consensus       255 ~ll~~~---~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpy  331 (472)
T PLN02987        255 ALLASD---DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPF  331 (472)
T ss_pred             HHHhcC---CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChH
Confidence            888653   25899999999999999999999999999999999999999999999999875   234578899999999


Q ss_pred             HHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcC---CCccccc
Q 012459          325 VNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRK---HLASFFP  401 (463)
Q Consensus       325 l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~---~~~~~~~  401 (463)
                      ++|+++|+||++|+++.++|.+.+|++++||.||||+.|+++.+++|+||++| +||++|+||||+++..   ....++|
T Consensus       332 l~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~~l~  410 (472)
T PLN02987        332 TQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYF-KDARTFNPWRWQSNSGTTVPSNVFTP  410 (472)
T ss_pred             HHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccC-CCccccCcccCCCCCCCCCCCcceEC
Confidence            99999999999999998889999999999999999999999999999999999 9999999999996533   3467999


Q ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeeccCCCceEEEeecC
Q 012459          402 FGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       402 Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  462 (463)
                      ||+|+|.|+|++||..|+++++++|+++|++++.++..  .....+++|.+++++++++|+
T Consensus       411 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        411 FGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK--LVFFPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             CCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc--eeecccccCCCCceEEEEecc
Confidence            99999999999999999999999999999999876654  223558999999999999985


No 28 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.8e-65  Score=502.93  Aligned_cols=399  Identities=15%  Similarity=0.221  Sum_probs=296.5

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccch-HHHHHHHHHh-CCcEEeccCCcceEEeCCHHHHHHHH
Q 012459           44 QGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTA-PLYHEWSRMY-GKTFLYWFGSKPRLAISDPDMIKEVL  121 (463)
Q Consensus        44 ~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ky-G~v~~~~~g~~~~vvv~dp~~v~~vl  121 (463)
                      +.||||+++|++||++++..                  .++. .++.++.++| |+||++++|+.++|+|+||+.++++|
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~------------------~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl  101 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIM------------------TRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAF  101 (534)
T ss_pred             CCCcCCCCCCeeccHHHhcc------------------CCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHH
Confidence            35899999999999988642                  0111 2455556665 79999999999999999999999999


Q ss_pred             hcCCCCccccCccchhhhhccC--ccccc-CChhHHHhhhhccCCCcHHHhhhhhhHHH-hhHHHHH-------------
Q 012459          122 MDTSGSFEKIGFNPLSRQLFGQ--GLVGL-TGDKWAIHRRISNQAFNMERVKGWVPDIV-ASPRRCL-------------  184 (463)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~g~--~l~~~-~~~~w~~~R~~~~~~f~~~~l~~~~~~~~-~~~~~~~-------------  184 (463)
                      .+++..|++++.......+.++  ++++. +|+.|+++|+++++.|...+...+...+. .++.+++             
T Consensus       102 ~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v  181 (534)
T PLN03018        102 RERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETV  181 (534)
T ss_pred             HhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce
Confidence            8777789888755543333222  46555 59999999999999875444333222221 1111111             


Q ss_pred             -----------------Hhccccccc------ccc----c------------cchhh---cccCC--------chhHHHH
Q 012459          185 -----------------RIGKKLEEG------EMN----L------------KLMCI---KFLPT--------KKNRERQ  214 (463)
Q Consensus       185 -----------------~fG~~~~~~------~~~----l------------~~~~~---~~~p~--------~~~~~~~  214 (463)
                                       +||.++...      +..    +            .++..   ..+|.        ...+...
T Consensus       182 d~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  261 (534)
T PLN03018        182 DVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAK  261 (534)
T ss_pred             eHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHH
Confidence                             678765310      010    0            00000   01110        0112233


Q ss_pred             HHHHHHHHHHHHHHHhcCcccc--chhhHHHHHHHhccccCCCCC--CCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHH
Q 012459          215 RLESETRESIRMLIKNNGKTRE--SSRNLLSLLMSSCKNHDGQEE--RLDVEEIIDECKTFYFAGKETTANLLTWALVLL  290 (463)
Q Consensus       215 ~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~l~~l~~~~~~~~--~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L  290 (463)
                      .....+.+++.++++++++...  .+.....|+++.+++..++++  .++++++.+++.++++||+|||+++++|++++|
T Consensus       262 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L  341 (534)
T PLN03018        262 VNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEM  341 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            3344566777777776543211  110112578888876543322  489999999999999999999999999999999


Q ss_pred             hcCHHHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCcccc-ccccccceeeCCeeeCCCCEEEEccch
Q 012459          291 AMHQEWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVML-MRQASRGVKLGNLDVPAGTQLYIALTA  369 (463)
Q Consensus       291 ~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~ip~G~~v~~~~~~  369 (463)
                      ++||++|+|+++||+++++.++.++.++++++||++|||+|+||++|+++.. +|.+.+|++++||.|||||.|.++.++
T Consensus       342 ~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~  421 (534)
T PLN03018        342 LKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPG  421 (534)
T ss_pred             HcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHH
Confidence            9999999999999999998777889999999999999999999999999974 799999999999999999999999999


Q ss_pred             hccCCCCccCCCCCCCCCCCCCCcC---------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCC-C
Q 012459          370 VHHDTDLWGEDANEFNPLRFNESRK---------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSY-V  439 (463)
Q Consensus       370 ~~~dp~~~g~~p~~F~P~R~~~~~~---------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~-~  439 (463)
                      +|+||++| +||++|+||||++.++         ....++|||+|+|.|+|++||++|+++++++|+++|++++.++. .
T Consensus       422 ~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~  500 (534)
T PLN03018        422 LGRNPKIW-KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGP  500 (534)
T ss_pred             hcCCcccC-CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCC
Confidence            99999999 9999999999996432         24579999999999999999999999999999999999987653 2


Q ss_pred             CCC--ceeeeeccCCCceEEEeecC
Q 012459          440 HAP--MLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       440 ~~~--~~~~~~~p~~~~~~~~~~r~  462 (463)
                      ...  ..+.+.. .++++|++++|.
T Consensus       501 ~~~~~~~~~~~~-p~~~~v~~~~R~  524 (534)
T PLN03018        501 LSLEEDDASLLM-AKPLLLSVEPRL  524 (534)
T ss_pred             CCccccccceec-CCCeEEEEEecc
Confidence            111  2244444 479999999983


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=5.7e-64  Score=491.91  Aligned_cols=397  Identities=24%  Similarity=0.364  Sum_probs=313.0

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHhcCCC
Q 012459           47 GGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLMDTSG  126 (463)
Q Consensus        47 pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~~~~~  126 (463)
                      -|-.|||++|+.+.+.....              -+.++..+.+|+++||++|++++|+.+.++++||+++++|+.+.+.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~   80 (489)
T PLN02936         15 GDDSGIPVADAKLEDVTDLL--------------GGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGS   80 (489)
T ss_pred             CCCCCCccHHhHHhhHHHHh--------------ccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccc
Confidence            57789999999998886432              2346778999999999999999999999999999999999986667


Q ss_pred             CccccCccchhhhhccCcccccCChhHHHhhhhccCCCcHHHhhhhhh-HHHhhHHHHH---------------------
Q 012459          127 SFEKIGFNPLSRQLFGQGLVGLTGDKWAIHRRISNQAFNMERVKGWVP-DIVASPRRCL---------------------  184 (463)
Q Consensus       127 ~~~~~~~~~~~~~~~g~~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~-~~~~~~~~~~---------------------  184 (463)
                      .|.++.........++.++++.+|+.|+++|+++++.|+..++..+.+ .+.+.++.++                     
T Consensus        81 ~f~~~~~~~~~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~  160 (489)
T PLN02936         81 KYAKGLVAEVSEFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQ  160 (489)
T ss_pred             cccCcchhhhhHHHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHH
Confidence            888765444444456788888999999999999999999888877654 4444444444                     


Q ss_pred             ---------Hhccccccccc--cc-----------------cchhhc--cc--CCchhHHHHHHHHHHHHHHHHHHHhcC
Q 012459          185 ---------RIGKKLEEGEM--NL-----------------KLMCIK--FL--PTKKNRERQRLESETRESIRMLIKNNG  232 (463)
Q Consensus       185 ---------~fG~~~~~~~~--~l-----------------~~~~~~--~~--p~~~~~~~~~~~~~~~~~~~~~i~~~~  232 (463)
                               +||..++....  .+                 .+|.+.  .+  .....+...++.+.+.+++.+.+++++
T Consensus       161 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~  240 (489)
T PLN02936        161 LTLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCK  240 (489)
T ss_pred             HHHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence                     57776653211  00                 001110  00  001223455566666777776665543


Q ss_pred             cccc-------ch---hhHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHH
Q 012459          233 KTRE-------SS---RNLLSLLMSSCKNHDGQEERLDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKARE  302 (463)
Q Consensus       233 ~~~~-------~~---~~~~~~~l~~l~~~~~~~~~l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  302 (463)
                      ....       ..   .+...++++.+++..   ..++++++.+++.++++||+|||+++++|++++|++||++|+++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~---~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~  317 (489)
T PLN02936        241 EIVEAEGEVIEGEEYVNDSDPSVLRFLLASR---EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQE  317 (489)
T ss_pred             HHHhhcccccccccccccCchHHHHHHHhcc---ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            2110       00   011267888887653   2489999999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccc-cccccccceeeCCeeeCCCCEEEEccchhccCCCCccCCC
Q 012459          303 EVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVM-LMRQASRGVKLGNLDVPAGTQLYIALTAVHHDTDLWGEDA  381 (463)
Q Consensus       303 Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~~dp~~~g~~p  381 (463)
                      ||+++++. +.++.+++++||||+|||+||||++|+++. .+|.+.+|+.++||.||||+.|+++.+++||||++| +||
T Consensus       318 Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~-~dP  395 (489)
T PLN02936        318 ELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVW-ERA  395 (489)
T ss_pred             HHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhC-CCc
Confidence            99999884 457899999999999999999999999986 556667778889999999999999999999999999 899


Q ss_pred             CCCCCCCCCCCcC------CCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceeeeeccCCCce
Q 012459          382 NEFNPLRFNESRK------HLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFISMQPQHGAH  455 (463)
Q Consensus       382 ~~F~P~R~~~~~~------~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~  455 (463)
                      ++|+||||+.++.      ....++|||.|+|.|+|++||++|+++++++|+++|++++.++.......+++..|.+++.
T Consensus       396 ~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  475 (489)
T PLN02936        396 EEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTNGLY  475 (489)
T ss_pred             cccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCCCeE
Confidence            9999999995432      2457999999999999999999999999999999999998876443334457788999999


Q ss_pred             EEEeecC
Q 012459          456 ILFSRIH  462 (463)
Q Consensus       456 ~~~~~r~  462 (463)
                      |++++|+
T Consensus       476 v~~~~R~  482 (489)
T PLN02936        476 MTVSRRR  482 (489)
T ss_pred             EEEEeee
Confidence            9999986


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=6.6e-63  Score=483.53  Aligned_cols=370  Identities=21%  Similarity=0.274  Sum_probs=293.4

Q ss_pred             cchHHHHHHHHHhC-CcEEeccCCcceEEeCCHHHHHHHHhcCCCCccccCccc-hhhhhccCcccccCChhHHHhhhhc
Q 012459           83 RTAPLYHEWSRMYG-KTFLYWFGSKPRLAISDPDMIKEVLMDTSGSFEKIGFNP-LSRQLFGQGLVGLTGDKWAIHRRIS  160 (463)
Q Consensus        83 ~~~~~~~~~~~kyG-~v~~~~~g~~~~vvv~dp~~v~~vl~~~~~~~~~~~~~~-~~~~~~g~~l~~~~~~~w~~~R~~~  160 (463)
                      +..+.+..+.++++ .+++++..+.  ++++||+.+++|+..+...|.++..+. ....+.|+|+++.+|+.|+++||++
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~~g~~wk~~Rk~l  138 (502)
T PLN02426         61 NLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNVDGDSWRFQRKMA  138 (502)
T ss_pred             cHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeecCcHHHHHHHHHh
Confidence            34556767888887 5777776553  899999999999986666787765443 4445678899999999999999999


Q ss_pred             cCCCcHHHhhhhh--hHHHhhHHHHH--------------------------------Hhccccccccc-----cc----
Q 012459          161 NQAFNMERVKGWV--PDIVASPRRCL--------------------------------RIGKKLEEGEM-----NL----  197 (463)
Q Consensus       161 ~~~f~~~~l~~~~--~~~~~~~~~~~--------------------------------~fG~~~~~~~~-----~l----  197 (463)
                      ++.|+..+++.+.  ..+.+.++.++                                .||.+++..+.     .+    
T Consensus       139 ~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~~  218 (502)
T PLN02426        139 SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADAF  218 (502)
T ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHHH
Confidence            9999988877653  22222221111                                67776542211     01    


Q ss_pred             -------------cchhh----cccCCchhHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHhccccCCCCCCCC
Q 012459          198 -------------KLMCI----KFLPTKKNRERQRLESETRESIRMLIKNNGKTRESSRNLLSLLMSSCKNHDGQEERLD  260 (463)
Q Consensus       198 -------------~~~~~----~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~l~  260 (463)
                                   ..+++    .+++....++..+..+.+.+++.++++++++.....   ..|+++.+++..     .+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~---~~dll~~ll~~~-----~~  290 (502)
T PLN02426        219 DTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFSA---SKDLLSRFMASI-----ND  290 (502)
T ss_pred             HHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccCC---cchHHHHHHhcC-----CC
Confidence                         00111    122222335556777788888889888776543211   268888888653     26


Q ss_pred             HHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC-CcchHHhhccChhHHHHHHhhhcCCCCc
Q 012459          261 VEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCGDN-DLRLAEKLSDLKIVNMILNETLRLYPPA  339 (463)
Q Consensus       261 ~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~  339 (463)
                      ++++.++++++++||+|||+++++|++++|++||++|+|+++||+++.+.+ ..++.+++++||||+|||+|+||++||+
T Consensus       291 ~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v  370 (502)
T PLN02426        291 DKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPV  370 (502)
T ss_pred             HHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCC
Confidence            889999999999999999999999999999999999999999999998754 4689999999999999999999999999


Q ss_pred             cccccccccceee-CCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcC----CCccccccCCCCCCCcchHH
Q 012459          340 VMLMRQASRGVKL-GNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRK----HLASFFPFGLGPRVCVGQNL  414 (463)
Q Consensus       340 ~~~~R~~~~d~~l-~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~----~~~~~~~Fg~G~r~C~G~~l  414 (463)
                      +...|.+.+|.++ +||.|||||.|.++.+++||||++||+||++|+||||+++..    .+..++|||+|+|.|+|++|
T Consensus       371 ~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~  450 (502)
T PLN02426        371 QFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEM  450 (502)
T ss_pred             CCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHH
Confidence            9877999999888 999999999999999999999999999999999999997431    34578999999999999999


Q ss_pred             HHHHHHHHHHHHHHhceeeeCCCCC-C-CCceeeeeccCCCceEEEeecC
Q 012459          415 AMVEAKVVLAIIIRRFNFFLSPSYV-H-APMLFISMQPQHGAHILFSRIH  462 (463)
Q Consensus       415 A~~~~~~~~~~ll~~f~~~~~~~~~-~-~~~~~~~~~p~~~~~~~~~~r~  462 (463)
                      |.+|+++++++|+++|++++.++.. . ....+.+++|++|++|++++|.
T Consensus       451 A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        451 ALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             HHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            9999999999999999999864322 1 3345688999999999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=4.2e-55  Score=421.99  Aligned_cols=378  Identities=14%  Similarity=0.197  Sum_probs=269.2

Q ss_pred             HcCCCCCCCCCCCCCHHHHHHHHHHhcCCCCCcccccccccchHHHHHHHHHhCC-cEEeccCCcce-------EEeCCH
Q 012459           43 EQGVGGPGYRLITGNSAEIRRLFIEAQSKPISPIHHDILHRTAPLYHEWSRMYGK-TFLYWFGSKPR-------LAISDP  114 (463)
Q Consensus        43 ~~~~pgP~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kyG~-v~~~~~g~~~~-------vvv~dp  114 (463)
                      .+.|||+.|||++|++.++.+.+              ...++..++.+..+|||+ ||+++++|.++       |+++||
T Consensus        16 ~~~PPg~~g~P~iG~~~~~~~~~--------------~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~   81 (480)
T PLN02648         16 LREIPGSYGLPFLGAIKDRLDYF--------------YFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQ   81 (480)
T ss_pred             CCCCCCCCCCcCcchhhhhhhHH--------------HhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcC
Confidence            35688999999999999877521              124667899999999998 99999988665       999999


Q ss_pred             HHHHHHHhc----CCCCccccCccchhhhhcc-C---cccccCChhHHHhhhhccCCCcHHHhhhhhhHHHhhHHHHH-H
Q 012459          115 DMIKEVLMD----TSGSFEKIGFNPLSRQLFG-Q---GLVGLTGDKWAIHRRISNQAFNMERVKGWVPDIVASPRRCL-R  185 (463)
Q Consensus       115 ~~v~~vl~~----~~~~~~~~~~~~~~~~~~g-~---~l~~~~~~~w~~~R~~~~~~f~~~~l~~~~~~~~~~~~~~~-~  185 (463)
                      ++++.||.+    +...+.. .+..... ++| .   +++..+|+.|+++|+++.+.|+ ..++.+.+.|.+.+...+ .
T Consensus        82 e~~~~v~~~~~~~~~~~~~~-~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~  158 (480)
T PLN02648         82 KSFPVLFDVSKVDKRDVFTG-TYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDT  158 (480)
T ss_pred             Cceeeeecchhcccccccee-eeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHH
Confidence            999999973    2333444 2233334 566 4   6677899999999999999999 577889998888887766 1


Q ss_pred             hcc------ccccccc--cccc----hhhcccCCch--h-H---HHHH----------HHHHHHHHHHHHHHhcCc-c--
Q 012459          186 IGK------KLEEGEM--NLKL----MCIKFLPTKK--N-R---ERQR----------LESETRESIRMLIKNNGK-T--  234 (463)
Q Consensus       186 fG~------~~~~~~~--~l~~----~~~~~~p~~~--~-~---~~~~----------~~~~~~~~~~~~i~~~~~-~--  234 (463)
                      +..      ..+-.+.  .+.+    ..+-......  . .   ....          +...+...+++++.++.. .  
T Consensus       159 w~~~~~~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~  238 (480)
T PLN02648        159 WEAELAKKGKAEFNDPLDQMAFNFLCKALTGKDPSETALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFF  238 (480)
T ss_pred             HHHHHhhCCCccccchHHHHHHHHHHHHHcCCCcchhhhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchh
Confidence            100      1110000  0000    0000000000  0 0   0000          001111222222222211 0  


Q ss_pred             --ccchhhH---HHHHHHhccccCCCCCCCCHHHHHHHHHH-HHHhcchhhHHHHHHHHHHHhcCHH-HHHHHHHHHHHh
Q 012459          235 --RESSRNL---LSLLMSSCKNHDGQEERLDVEEIIDECKT-FYFAGKETTANLLTWALVLLAMHQE-WQIKAREEVFQV  307 (463)
Q Consensus       235 --~~~~~~~---~~~~l~~l~~~~~~~~~l~~~~i~~~~~~-l~~ag~~tt~~~l~~~l~~L~~~p~-~~~~l~~Ei~~~  307 (463)
                        ....++.   ..+.+..+++..++ .+++++|+.++++. +.+++++|++++++|++++|++||+ +|+++++||+.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~ll~~~~~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~  317 (480)
T PLN02648        239 LVKSDYDKLYDFFRASATEALDLAEK-FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSA  317 (480)
T ss_pred             hhhccHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence              0111111   11222234433222 35999999999875 4567788888899999999999995 999999999999


Q ss_pred             hCC-CCcchHHhhccChhHHHHHHhhhcCCCCccccccccccceeeC----CeeeCCCCEEEEccchhccCCCCccCCCC
Q 012459          308 CGD-NDLRLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLG----NLDVPAGTQLYIALTAVHHDTDLWGEDAN  382 (463)
Q Consensus       308 ~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~----g~~ip~G~~v~~~~~~~~~dp~~~g~~p~  382 (463)
                      .+. ++.++.+++++|||+++||+|+||++|+++...|.+.+|++++    ||.||||+.|+++.+.+||||++| +||+
T Consensus       318 ~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~-~dP~  396 (480)
T PLN02648        318 VKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVF-DRPE  396 (480)
T ss_pred             hccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccC-CCcc
Confidence            863 4568999999999999999999999999998889999999995    799999999999999999999999 9999


Q ss_pred             CCCCCCCCCCcC-CCcccccc---------CCCCCCCcchHHHHHHHHHHHHHHHHhce-eeeCCCCC
Q 012459          383 EFNPLRFNESRK-HLASFFPF---------GLGPRVCVGQNLAMVEAKVVLAIIIRRFN-FFLSPSYV  439 (463)
Q Consensus       383 ~F~P~R~~~~~~-~~~~~~~F---------g~G~r~C~G~~lA~~~~~~~~~~ll~~f~-~~~~~~~~  439 (463)
                      +|||+||++++. ....+++|         |+|+|.|+|++||+.|+++++++|+++|+ +++.++..
T Consensus       397 ~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~  464 (480)
T PLN02648        397 EFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTS  464 (480)
T ss_pred             eeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCcc
Confidence            999999986432 22334444         67789999999999999999999999998 99876643


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=2.5e-53  Score=405.10  Aligned_cols=345  Identities=31%  Similarity=0.465  Sum_probs=279.6

Q ss_pred             HHHHHHHHhCCcEEeccCCcc--eEEeCCHHHHHHHHhcCCCCccccCccc----hhhhhccCc-ccccCChhHHHhhhh
Q 012459           87 LYHEWSRMYGKTFLYWFGSKP--RLAISDPDMIKEVLMDTSGSFEKIGFNP----LSRQLFGQG-LVGLTGDKWAIHRRI  159 (463)
Q Consensus        87 ~~~~~~~kyG~v~~~~~g~~~--~vvv~dp~~v~~vl~~~~~~~~~~~~~~----~~~~~~g~~-l~~~~~~~w~~~R~~  159 (463)
                      ....+.+.||.++..+..+..  ++++++|+++++++.++. .+++.....    .....+|.+ +++.||+.|+++||+
T Consensus        27 ~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl  105 (411)
T COG2124          27 FLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKL  105 (411)
T ss_pred             hHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHHH
Confidence            455677888888888866554  899999999999998542 233322211    234556665 788999999999999


Q ss_pred             ccCCCcHHHhhhhhhHHHhhHHHHH-------------------------Hhccccccccccc-cc-hhh-----cccCC
Q 012459          160 SNQAFNMERVKGWVPDIVASPRRCL-------------------------RIGKKLEEGEMNL-KL-MCI-----KFLPT  207 (463)
Q Consensus       160 ~~~~f~~~~l~~~~~~~~~~~~~~~-------------------------~fG~~~~~~~~~l-~~-~~~-----~~~p~  207 (463)
                      ++++|+++.++.+.+.+.+.+.+++                         +||....+..... +. ..+     ...+.
T Consensus       106 ~~~~F~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~~l~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (411)
T COG2124         106 LAPAFTPRALRGYRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIAELLGVPLEDRPQLLRWSDALLLRLDPDLGPE  185 (411)
T ss_pred             hccccCHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHhccCcccCCc
Confidence            9999999999999999999888666                         2222222111100 00 000     11122


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHhccccCCCCC-CCCHHHHHHHHHHHHHhcchhhHHHHHHH
Q 012459          208 KKNRERQRLESETRESIRMLIKNNGKTRESSRNLLSLLMSSCKNHDGQEE-RLDVEEIIDECKTFYFAGKETTANLLTWA  286 (463)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-~l~~~~i~~~~~~l~~ag~~tt~~~l~~~  286 (463)
                      ....+..++...+.+++.+++++++...  .    +|+++.++...++++ .+|++||.++++++++||+|||+++++|+
T Consensus       186 ~~~~~~~~a~~~~~~~~~~li~~rR~~~--~----~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a  259 (411)
T COG2124         186 EPWRRARAARRELDAYLRALIAERRAAP--R----DDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWA  259 (411)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhccCC--c----ccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            3456678888999999999999988332  2    789999888876665 59999999999999999999999999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEEc
Q 012459          287 LVLLAMHQEWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYIA  366 (463)
Q Consensus       287 l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~  366 (463)
                      ++.|++||++++++++|.+.                ||+.++++|+||++||++.+.|.+.+|++++|+.||||+.|.++
T Consensus       260 ~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~  323 (411)
T COG2124         260 LYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLS  323 (411)
T ss_pred             HHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEec
Confidence            99999999999999998643                79999999999999999998899999999999999999999999


Q ss_pred             cchhccCCCCccCCCCCCCCCCCCCCcCCCccccccCCCCCCCcchHHHHHHHHHHHHHHHHhceeeeCCCCCCCCceee
Q 012459          367 LTAVHHDTDLWGEDANEFNPLRFNESRKHLASFFPFGLGPRVCVGQNLAMVEAKVVLAIIIRRFNFFLSPSYVHAPMLFI  446 (463)
Q Consensus       367 ~~~~~~dp~~~g~~p~~F~P~R~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~~ll~~f~~~~~~~~~~~~~~~~  446 (463)
                      ++++||||++| +||++|||+||.      ..|+|||+|+|.|+|++||++|++++++.|+++|++....+. .......
T Consensus       324 ~~~anrDp~~f-~~P~~F~p~R~~------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~~-~~~~~~~  395 (411)
T COG2124         324 IGAANRDPEVF-PDPDEFDPERFN------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAEP-PPLVRRP  395 (411)
T ss_pred             HhhhcCChhhC-CChhhcCCCCCC------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCCC-CCccccc
Confidence            99999999999 999999999995      779999999999999999999999999999999998765552 3345566


Q ss_pred             eeccCCCceEEEeecC
Q 012459          447 SMQPQHGAHILFSRIH  462 (463)
Q Consensus       447 ~~~p~~~~~~~~~~r~  462 (463)
                      +..|..+..+.++.++
T Consensus       396 ~~~~~g~~~l~v~~~~  411 (411)
T COG2124         396 TLVPRGGERLPVRRRR  411 (411)
T ss_pred             cccCCCcceeeeecCC
Confidence            7778888888887653


No 33 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=69.07  E-value=4.8  Score=26.08  Aligned_cols=18  Identities=22%  Similarity=0.069  Sum_probs=16.2

Q ss_pred             HHHHHHhcCHHHHHHHHH
Q 012459          285 WALVLLAMHQEWQIKARE  302 (463)
Q Consensus       285 ~~l~~L~~~p~~~~~l~~  302 (463)
                      -++.||..||++.+++.+
T Consensus         4 ~iV~YLv~nPevl~kl~~   21 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKE   21 (57)
T ss_pred             HHHHHHHHChHHHHHHHc
Confidence            467899999999999997


No 34 
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=64.32  E-value=24  Score=22.61  Aligned_cols=7  Identities=43%  Similarity=0.563  Sum_probs=5.4

Q ss_pred             CCCCCCC
Q 012459           45 GVGGPGY   51 (463)
Q Consensus        45 ~~pgP~~   51 (463)
                      +||||++
T Consensus        55 GPPGpp~   61 (62)
T COG4459          55 GPPGPPG   61 (62)
T ss_pred             CCCCCCC
Confidence            7888874


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=58.86  E-value=3.4  Score=35.01  Aligned_cols=44  Identities=16%  Similarity=0.328  Sum_probs=31.2

Q ss_pred             cChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEE
Q 012459          321 DLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYI  365 (463)
Q Consensus       321 ~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~  365 (463)
                      .-..+.|||.|+.-... ...+.=...+|+.++|..|||||.+.-
T Consensus        51 ~~n~I~A~V~~~qtv~~-Gs~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVD-GSRVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeC-CCEEEEEEcCceEECCEEeCCCCEEEE
Confidence            34567889999876642 223323456899999999999987654


No 36 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=55.49  E-value=44  Score=20.91  Aligned_cols=43  Identities=12%  Similarity=0.111  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHH
Q 012459          262 EEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEV  304 (463)
Q Consensus       262 ~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  304 (463)
                      -++...+..++-.|.|..+-.++--+...--||+.+..+.+|+
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            3566677777888888888888888888888999998888876


No 37 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=55.05  E-value=7.3  Score=25.55  Aligned_cols=9  Identities=33%  Similarity=0.615  Sum_probs=6.8

Q ss_pred             CCCCCCCCc
Q 012459          385 NPLRFNESR  393 (463)
Q Consensus       385 ~P~R~~~~~  393 (463)
                      ||||||...
T Consensus        44 DPERWLP~~   52 (59)
T PF08492_consen   44 DPERWLPKR   52 (59)
T ss_pred             CccccCchh
Confidence            789998643


No 38 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=51.99  E-value=13  Score=29.12  Aligned_cols=7  Identities=29%  Similarity=0.150  Sum_probs=3.0

Q ss_pred             CCCCCHH
Q 012459           53 LITGNSA   59 (463)
Q Consensus        53 p~~G~~~   59 (463)
                      |+-|+.+
T Consensus        33 P~~gt~w   39 (130)
T PF12273_consen   33 PIYGTRW   39 (130)
T ss_pred             CcCCcee
Confidence            3444443


No 39 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=49.70  E-value=14  Score=28.84  Aligned_cols=22  Identities=14%  Similarity=0.472  Sum_probs=16.9

Q ss_pred             CCcchHHHHHHHHHHHHHHHHh
Q 012459          408 VCVGQNLAMVEAKVVLAIIIRR  429 (463)
Q Consensus       408 ~C~G~~lA~~~~~~~~~~ll~~  429 (463)
                      +|.|+.||+.++-.++++|+..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            8999999999999999999975


No 40 
>PRK10332 hypothetical protein; Provisional
Probab=49.03  E-value=91  Score=23.43  Aligned_cols=38  Identities=16%  Similarity=0.272  Sum_probs=26.8

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 012459            1 MSLLLLLLLLLLTVIFIVIITSLLKFVYSFIWVPHRIQ   38 (463)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~   38 (463)
                      ++|+.+|+.+++.++.+..+......+..-+......+
T Consensus        11 FsL~EvlvAm~i~~i~~~al~~~~p~L~~~F~~~wQqR   48 (107)
T PRK10332         11 FSLPEVLLAMVLMVMIVTALSGYQRTLMNSFASRNQYR   48 (107)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57888999988888877777777666666555444333


No 41 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=47.63  E-value=80  Score=24.62  Aligned_cols=38  Identities=29%  Similarity=0.604  Sum_probs=28.7

Q ss_pred             cchHHHHHHHHHhCCcEEeccCCcceEEeCCHHHHHHHHh
Q 012459           83 RTAPLYHEWSRMYGKTFLYWFGSKPRLAISDPDMIKEVLM  122 (463)
Q Consensus        83 ~~~~~~~~~~~kyG~v~~~~~g~~~~vvv~dp~~v~~vl~  122 (463)
                      +....+.+|.++||.+--..  +...+...|++.++++..
T Consensus        75 ~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~  112 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLA  112 (129)
T ss_pred             HHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHh
Confidence            44457899999999764432  355778889999999986


No 42 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=43.91  E-value=31  Score=27.57  Aligned_cols=42  Identities=29%  Similarity=0.596  Sum_probs=30.1

Q ss_pred             ccccceeeCCeeeCCCCEEEEccc-------hhccCCCCccCCCCCCCCCC
Q 012459          345 QASRGVKLGNLDVPAGTQLYIALT-------AVHHDTDLWGEDANEFNPLR  388 (463)
Q Consensus       345 ~~~~d~~l~g~~ip~G~~v~~~~~-------~~~~dp~~~g~~p~~F~P~R  388 (463)
                      ...+|+.++|..||+|+.-+..+.       .+|.+...||.  ..++|+.
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~--~~Y~~~~   99 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA--YNYDPSK   99 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc--cccCchh
Confidence            345899999999999998776543       34788888864  4555543


No 43 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=41.84  E-value=1.3e+02  Score=21.60  Aligned_cols=49  Identities=10%  Similarity=0.085  Sum_probs=41.4

Q ss_pred             CHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Q 012459          260 DVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVC  308 (463)
Q Consensus       260 ~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  308 (463)
                      ..+.........++--++.++....-.+.+-++||+..+++.+++.+-+
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            4556666777788899999999999999999999999999999887644


No 44 
>PF07219 HemY_N:  HemY protein N-terminus;  InterPro: IPR010817 This entry represents the N terminus (approximately 150 residues) of bacterial HemY porphyrin biosynthesis proteins. These are membrane protein involved in a late step of protoheme IX synthesis [].
Probab=41.66  E-value=70  Score=24.05  Aligned_cols=25  Identities=20%  Similarity=0.555  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhHH
Q 012459           11 LLTVIFIVIITSLLKFVYSFIWVPH   35 (463)
Q Consensus        11 ~~~~~~~~il~~~~~~~~~~~~~~~   35 (463)
                      +..++++++++++++.+...+..|.
T Consensus        21 ~~l~~~~~~l~ll~~ll~~~~~~p~   45 (108)
T PF07219_consen   21 ILLLLLFVVLYLLLRLLRRLLSLPS   45 (108)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhChH
Confidence            3333344444455555555444443


No 45 
>PRK06789 flagellar motor switch protein; Validated
Probab=39.49  E-value=44  Score=23.19  Aligned_cols=39  Identities=18%  Similarity=0.227  Sum_probs=30.1

Q ss_pred             HHHhhhcCCCCccc-cccccccce--eeCCeeeCCCCEEEEc
Q 012459          328 ILNETLRLYPPAVM-LMRQASRGV--KLGNLDVPAGTQLYIA  366 (463)
Q Consensus       328 ~i~E~lRl~p~~~~-~~R~~~~d~--~l~g~~ip~G~~v~~~  366 (463)
                      -++|.+.+.+-... +-|.+-+.+  .++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            46888899876553 667777655  4599999999999876


No 46 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=37.90  E-value=15  Score=23.34  Aligned_cols=10  Identities=50%  Similarity=1.052  Sum_probs=8.8

Q ss_pred             ccCCCCCCCc
Q 012459          401 PFGLGPRVCV  410 (463)
Q Consensus       401 ~Fg~G~r~C~  410 (463)
                      +||-|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            5999999986


No 47 
>PF08114 PMP1_2:  ATPase proteolipid family;  InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=36.34  E-value=18  Score=21.39  Aligned_cols=25  Identities=20%  Similarity=0.283  Sum_probs=13.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhh
Q 012459            9 LLLLTVIFIVIITSLLKFVYSFIWV   33 (463)
Q Consensus         9 ~~~~~~~~~~il~~~~~~~~~~~~~   33 (463)
                      .++..+++++.+.++..++|+-|..
T Consensus        11 IlVF~lVglv~i~iva~~iYRKw~a   35 (43)
T PF08114_consen   11 ILVFCLVGLVGIGIVALFIYRKWQA   35 (43)
T ss_pred             eeehHHHHHHHHHHHHHHHHHHHHH
Confidence            3444555555555555565555443


No 48 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=35.29  E-value=10  Score=36.10  Aligned_cols=44  Identities=20%  Similarity=0.320  Sum_probs=31.6

Q ss_pred             cChhHHHHHHhhhcCCCCccccccccccceeeCCeeeCCCCEEEE
Q 012459          321 DLKIVNMILNETLRLYPPAVMLMRQASRGVKLGNLDVPAGTQLYI  365 (463)
Q Consensus       321 ~l~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~  365 (463)
                      .-..+.|||.|+.-+. .+..+.=...+|+.++|..|||||.|.-
T Consensus       254 ~~n~I~A~V~~~qtv~-~G~~vrlRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       254 ERNTIRACVHETQTVV-DGSAVKLRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCCceEEEEcCceEEe-cCCEEEEEEcCceeeCCEEecCCCEEEE
Confidence            3457889999987765 2333323456899999999999987643


No 49 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=33.96  E-value=91  Score=22.35  Aligned_cols=17  Identities=18%  Similarity=0.448  Sum_probs=14.7

Q ss_pred             CHHHHHHHHHHHHHhhC
Q 012459          293 HQEWQIKAREEVFQVCG  309 (463)
Q Consensus       293 ~p~~~~~l~~Ei~~~~~  309 (463)
                      .|+....+|+||.+|+.
T Consensus        35 ~pd~l~~Lr~eIl~VI~   51 (88)
T COG0851          35 QPDYLEQLRKEILEVIS   51 (88)
T ss_pred             CcchHHHHHHHHHHHHH
Confidence            38999999999999874


No 50 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=33.90  E-value=86  Score=18.61  Aligned_cols=28  Identities=32%  Similarity=0.343  Sum_probs=19.0

Q ss_pred             HHHHHHHHHHHHHhhCCCCcchHHhhccChhHHHHHHhhhc
Q 012459          294 QEWQIKAREEVFQVCGDNDLRLAEKLSDLKIVNMILNETLR  334 (463)
Q Consensus       294 p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR  334 (463)
                      .++++.+|+|++.+             +-..++|...|.-|
T Consensus        10 qEIL~EvrkEl~K~-------------K~EIIeA~~~eL~r   37 (40)
T PF08776_consen   10 QEILEEVRKELQKV-------------KEEIIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHH-------------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-------------HHHHHHHHHHHHhc
Confidence            46777778887766             22467777777655


No 51 
>COG3898 Uncharacterized membrane-bound protein [Function unknown]
Probab=33.73  E-value=1.1e+02  Score=29.03  Aligned_cols=38  Identities=21%  Similarity=0.253  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 012459            4 LLLLLLLLLTVIFIVIITSLLKFVYSFIWVPHRIQRHF   41 (463)
Q Consensus         4 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~   41 (463)
                      |++|..-.+++.++..++++++.+.+.+.+|+.-++++
T Consensus        39 mslm~Aa~~iva~vaav~llwwlv~~iw~sP~t~~Ryf   76 (531)
T COG3898          39 MSLMVAASIIVALVAAVLLLWWLVRSIWESPYTARRYF   76 (531)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence            45555555666666666777888888888887544433


No 52 
>PF05399 EVI2A:  Ectropic viral integration site 2A protein (EVI2A);  InterPro: IPR008608 This family contains several mammalian ectropic viral integration site 2A (EVI2A) proteins. The function of this protein is unknown although it is thought to be a membrane protein and may function as an oncogene in retrovirus induced myeloid tumours [, ].; GO: 0016021 integral to membrane
Probab=32.66  E-value=1.6e+02  Score=25.02  Aligned_cols=7  Identities=0%  Similarity=0.036  Sum_probs=2.9

Q ss_pred             hHHHHHH
Q 012459           33 VPHRIQR   39 (463)
Q Consensus        33 ~~~~~~~   39 (463)
                      +++++.+
T Consensus       159 S~LKrsk  165 (227)
T PF05399_consen  159 SSLKRSK  165 (227)
T ss_pred             HHHHHHH
Confidence            3444443


No 53 
>PHA02902 putative IMV membrane protein; Provisional
Probab=30.87  E-value=1.4e+02  Score=19.79  Aligned_cols=7  Identities=14%  Similarity=0.435  Sum_probs=3.7

Q ss_pred             cCCCCCC
Q 012459           44 QGVGGPG   50 (463)
Q Consensus        44 ~~~pgP~   50 (463)
                      +.+|.|.
T Consensus        28 kci~sP~   34 (70)
T PHA02902         28 KCIPSPD   34 (70)
T ss_pred             cCCCCCC
Confidence            3556553


No 54 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.87  E-value=1.8e+02  Score=19.79  Aligned_cols=19  Identities=42%  Similarity=0.635  Sum_probs=8.6

Q ss_pred             ChhHHHHHHHHHHHHHHHH
Q 012459            1 MSLLLLLLLLLLTVIFIVI   19 (463)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~i   19 (463)
                      |++.+.++.++++++..++
T Consensus         1 m~l~lail~ivl~ll~G~~   19 (71)
T COG3763           1 MSLWLAILLIVLALLAGLI   19 (71)
T ss_pred             ChhHHHHHHHHHHHHHHHH
Confidence            4444455444444444333


No 55 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=28.06  E-value=45  Score=22.45  Aligned_cols=16  Identities=31%  Similarity=0.499  Sum_probs=13.1

Q ss_pred             cChhHHHHHHhhhcCC
Q 012459          321 DLKIVNMILNETLRLY  336 (463)
Q Consensus       321 ~l~~l~a~i~E~lRl~  336 (463)
                      +..+++.+|+|++|..
T Consensus        39 r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   39 RKQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3457999999999974


No 56 
>PRK14740 kdbF potassium-transporting ATPase subunit F; Provisional
Probab=27.91  E-value=1.1e+02  Score=16.61  Aligned_cols=19  Identities=21%  Similarity=0.170  Sum_probs=8.9

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 012459            6 LLLLLLLTVIFIVIITSLL   24 (463)
Q Consensus         6 ~~~~~~~~~~~~~il~~~~   24 (463)
                      .+.|+..++...+.++++.
T Consensus         3 ~~~wls~a~a~~Lf~YLv~   21 (29)
T PRK14740          3 VLDWLSLALATGLFVYLLV   21 (29)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            3455555555444444443


No 57 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=27.90  E-value=95  Score=21.92  Aligned_cols=7  Identities=14%  Similarity=0.615  Sum_probs=2.6

Q ss_pred             HHHHHHH
Q 012459            8 LLLLLTV   14 (463)
Q Consensus         8 ~~~~~~~   14 (463)
                      ++++..+
T Consensus        28 MtILivL   34 (85)
T PF10717_consen   28 MTILIVL   34 (85)
T ss_pred             HHHHHHH
Confidence            3333333


No 58 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=27.82  E-value=51  Score=18.40  Aligned_cols=16  Identities=19%  Similarity=0.428  Sum_probs=13.1

Q ss_pred             CCccccccCCCCCCCc
Q 012459          395 HLASFFPFGLGPRVCV  410 (463)
Q Consensus       395 ~~~~~~~Fg~G~r~C~  410 (463)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            5677999998888884


No 59 
>PF15080 DUF4547:  Domain of unknown function (DUF4547)
Probab=26.40  E-value=2.4e+02  Score=22.85  Aligned_cols=50  Identities=16%  Similarity=0.198  Sum_probs=38.0

Q ss_pred             CCCHHHHHHHHHHHHHhcchhhH----------HHHHHHHHHHhcCHHHHHHHHHHHHHh
Q 012459          258 RLDVEEIIDECKTFYFAGKETTA----------NLLTWALVLLAMHQEWQIKAREEVFQV  307 (463)
Q Consensus       258 ~l~~~~i~~~~~~l~~ag~~tt~----------~~l~~~l~~L~~~p~~~~~l~~Ei~~~  307 (463)
                      ++.++++.+.|.-++.-|++.--          .-+++++..+..|++.|+.+..-+.-+
T Consensus       112 GLqE~dv~aLCtFfiahgnkaehy~a~~R~~yi~dv~~mItnmVkNqalq~~llrAvqvi  171 (196)
T PF15080_consen  112 GLQEGDVTALCTFFIAHGNKAEHYAAKVRQMYIRDVTFMITNMVKNQALQDGLLRAVQVI  171 (196)
T ss_pred             CCCcccHHHHHHHHHHhcchHhHhHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            46777788888888877776532          336788999999999999988766544


No 60 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=26.36  E-value=1.8e+02  Score=20.97  Aligned_cols=17  Identities=12%  Similarity=0.139  Sum_probs=14.8

Q ss_pred             CHHHHHHHHHHHHHhhC
Q 012459          293 HQEWQIKAREEVFQVCG  309 (463)
Q Consensus       293 ~p~~~~~l~~Ei~~~~~  309 (463)
                      .|+.++++++||-+|+.
T Consensus        35 ~p~~l~~lk~eil~VIs   51 (87)
T PRK13991         35 TPEMMEQMKADLAEVIK   51 (87)
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            59999999999988864


No 61 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=26.08  E-value=80  Score=23.81  Aligned_cols=11  Identities=18%  Similarity=-0.142  Sum_probs=8.2

Q ss_pred             CCCCCCCHHHH
Q 012459           51 YRLITGNSAEI   61 (463)
Q Consensus        51 ~~p~~G~~~~~   61 (463)
                      .-|+.||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            46899997754


No 62 
>PF06667 PspB:  Phage shock protein B;  InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=25.29  E-value=1.9e+02  Score=20.20  Aligned_cols=25  Identities=32%  Similarity=0.515  Sum_probs=10.4

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHH
Q 012459            1 MSLLLLLLLLLLTVIFIVIITSLLK   25 (463)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~il~~~~~   25 (463)
                      |+..-++..+++-++++..+++++.
T Consensus         1 M~~~fl~~plivf~ifVap~WL~lH   25 (75)
T PF06667_consen    1 MSFEFLFVPLIVFMIFVAPIWLILH   25 (75)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHH
Confidence            4533444444444444444433333


No 63 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=25.22  E-value=1.1e+02  Score=28.15  Aligned_cols=71  Identities=20%  Similarity=0.326  Sum_probs=43.1

Q ss_pred             hHHHHHHhhhcCCCCc---cc-cccccccceee----CCeeeCCCCEEEEccchhccCCCCccCCCCCCCCCCCCCCcCC
Q 012459          324 IVNMILNETLRLYPPA---VM-LMRQASRGVKL----GNLDVPAGTQLYIALTAVHHDTDLWGEDANEFNPLRFNESRKH  395 (463)
Q Consensus       324 ~l~a~i~E~lRl~p~~---~~-~~R~~~~d~~l----~g~~ip~G~~v~~~~~~~~~dp~~~g~~p~~F~P~R~~~~~~~  395 (463)
                      +-+.+++.|..+.||+   |. +.-.++.|..+    =.-+|..||.|.++  .                         +
T Consensus       274 ~ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~--G-------------------------s  326 (361)
T COG1759         274 MGERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG--G-------------------------S  326 (361)
T ss_pred             HHHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC--C-------------------------C
Confidence            4567888888898874   33 33344444333    24577888877655  1                         2


Q ss_pred             CccccccCCCCCCCcchHHHHHHHHHHHH
Q 012459          396 LASFFPFGLGPRVCVGQNLAMVEAKVVLA  424 (463)
Q Consensus       396 ~~~~~~Fg~G~r~C~G~~lA~~~~~~~~~  424 (463)
                      +++++-||.+  +-+|+++|+ |+|.++-
T Consensus       327 pYs~l~~~~p--ms~GrRIA~-EIk~A~e  352 (361)
T COG1759         327 PYSNLYWGEP--MSTGRRIAR-EIKEAIE  352 (361)
T ss_pred             cchhhhcCCC--cchhhHHHH-HHHHHHH
Confidence            2233334333  558999998 8887763


No 64 
>PF00599 Flu_M2:  Influenza Matrix protein (M2);  InterPro: IPR002089 This entry contains Influenza virus matrix protein 2. It is an integral membrane protein that is expressed on the infected cell surface and incorporated into virions where it is a minor component. The protein spans the viral membrane with an extracellular amino-terminus and a cytoplasmic carboxy-terminus. The transmembrane domain of the M2 protein forms the channel pore. The M2 protein, which forms a homotetramer, has H+ ion channel which was found to be regulated by pH [ and may have a pivotal role in the biology of Influenza virus infection [].; GO: 0015078 hydrogen ion transmembrane transporter activity, 0015992 proton transport, 0033644 host cell membrane, 0055036 virion membrane; PDB: 2L0J_A 2KWX_B 2KIH_A 2RLF_A 1MP6_A 2LJB_D 2LJC_A 2H95_B 1NYJ_B 3BKD_E ....
Probab=24.44  E-value=2.5e+02  Score=19.81  Aligned_cols=19  Identities=16%  Similarity=0.195  Sum_probs=9.1

Q ss_pred             HHHHHHHHHHHHHHHhhhH
Q 012459           16 FIVIITSLLKFVYSFIWVP   34 (463)
Q Consensus        16 ~~~il~~~~~~~~~~~~~~   34 (463)
                      ++-|+.++++.+-+.+++-
T Consensus        32 IiGILHLiLWI~DRlffkc   50 (97)
T PF00599_consen   32 IIGILHLILWILDRLFFKC   50 (97)
T ss_dssp             HHHHHHHHHHHHHHCTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            3344455555555554443


No 65 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=23.98  E-value=24  Score=28.87  Aligned_cols=31  Identities=29%  Similarity=0.530  Sum_probs=22.8

Q ss_pred             CCCCCCCCC----CcCCCccccccCCCCCCCcchH
Q 012459          383 EFNPLRFNE----SRKHLASFFPFGLGPRVCVGQN  413 (463)
Q Consensus       383 ~F~P~R~~~----~~~~~~~~~~Fg~G~r~C~G~~  413 (463)
                      +|||++|=.    -+.+....+-|..|+=.|-|..
T Consensus        36 eYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          36 EYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             ccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            678888832    2234556788999999999975


No 66 
>PF07219 HemY_N:  HemY protein N-terminus;  InterPro: IPR010817 This entry represents the N terminus (approximately 150 residues) of bacterial HemY porphyrin biosynthesis proteins. These are membrane protein involved in a late step of protoheme IX synthesis [].
Probab=23.89  E-value=2.7e+02  Score=20.86  Aligned_cols=25  Identities=36%  Similarity=0.624  Sum_probs=10.9

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHH
Q 012459            1 MSLLLLLLLLLLTVIFIVIITSLLK   25 (463)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~il~~~~~   25 (463)
                      ||+..+++.+++.++.+.+++-++.
T Consensus        14 ~sl~~~~~~l~~~~~~l~ll~~ll~   38 (108)
T PF07219_consen   14 TSLWVALILLLLLFVVLYLLLRLLR   38 (108)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444444444444433333


No 67 
>PF15050 SCIMP:  SCIMP protein
Probab=23.29  E-value=1.9e+02  Score=22.04  Aligned_cols=12  Identities=8%  Similarity=-0.236  Sum_probs=5.2

Q ss_pred             CCCCC-CCCCCCC
Q 012459           46 VGGPG-YRLITGN   57 (463)
Q Consensus        46 ~pgP~-~~p~~G~   57 (463)
                      ||.|| +.|+.|+
T Consensus        70 PpLPPRg~~s~~~   82 (133)
T PF15050_consen   70 PPLPPRGSPSPED   82 (133)
T ss_pred             CCCCCCCCCCccc
Confidence            34443 3444443


No 68 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=22.94  E-value=2.1e+02  Score=22.56  Aligned_cols=9  Identities=11%  Similarity=0.563  Sum_probs=3.4

Q ss_pred             HHHHHHHHH
Q 012459            8 LLLLLTVIF   16 (463)
Q Consensus         8 ~~~~~~~~~   16 (463)
                      .++++++++
T Consensus        32 ~tILiaIvV   40 (189)
T PF05568_consen   32 YTILIAIVV   40 (189)
T ss_pred             HHHHHHHHH
Confidence            333333333


No 69 
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=22.20  E-value=1.6e+02  Score=16.36  Aligned_cols=17  Identities=18%  Similarity=0.442  Sum_probs=8.1

Q ss_pred             HHHHHHHHHHHHHHHHH
Q 012459            5 LLLLLLLLTVIFIVIIT   21 (463)
Q Consensus         5 ~~~~~~~~~~~~~~il~   21 (463)
                      .+-++++++..+.++.+
T Consensus         3 al~Ytfll~~tlgiiFF   19 (31)
T PRK11875          3 SFAYILILTLALVTLFF   19 (31)
T ss_pred             hHHHHHHHHHHHHHHHH
Confidence            34455555555544443


No 70 
>COG5394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.91  E-value=4.4e+02  Score=21.45  Aligned_cols=51  Identities=16%  Similarity=0.186  Sum_probs=31.3

Q ss_pred             CCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCC
Q 012459          259 LDVEEIIDECKTFYFAGKETTANLLTWALVLLAMHQEWQIKAREEVFQVCGDN  311 (463)
Q Consensus       259 l~~~~i~~~~~~l~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  311 (463)
                      +=.-....+++.+..  ..--...=++.=..+-...+.|+++|+.+...+|++
T Consensus        75 llpi~fLrQlI~fYG--dqMQ~~vpsyLE~smqaF~~qQs~lreq~~~~~~~~  125 (193)
T COG5394          75 LLPISFLRQLISFYG--DQMQMVVPSYLEHSMQAFSDQQSRLREQMKKAFGGN  125 (193)
T ss_pred             cccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            333344445554443  333333334455666677899999999999998854


No 71 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=21.13  E-value=2e+02  Score=20.24  Aligned_cols=61  Identities=10%  Similarity=0.036  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHHhhCCCCcchHHhhcc---ChhHHHHHHhhhcCCCCccc--cccccccceeeCCee
Q 012459          295 EWQIKAREEVFQVCGDNDLRLAEKLSD---LKIVNMILNETLRLYPPAVM--LMRQASRGVKLGNLD  356 (463)
Q Consensus       295 ~~~~~l~~Ei~~~~~~~~~~~~~~~~~---l~~l~a~i~E~lRl~p~~~~--~~R~~~~d~~l~g~~  356 (463)
                      +.++++.+.+.+ ++.+...++.++.+   .|--...+--+++-+|....  ..|++..|-.++||.
T Consensus         2 ~f~~~V~~~l~~-IP~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y~   67 (80)
T TIGR00589         2 PFQQRVWQALRT-IPYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGYA   67 (80)
T ss_pred             hHHHHHHHHHhC-CCCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCCC
Confidence            356777777765 34455566665543   23445666677888875443  559999988888763


No 72 
>PF10264 Stork_head:  Winged helix Storkhead-box1 domain;  InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=20.58  E-value=2.7e+02  Score=19.73  Aligned_cols=39  Identities=21%  Similarity=0.198  Sum_probs=25.3

Q ss_pred             HHHHHHHHHHhcC--HHHHHHHHHHHHHhhCCCCcchHHhh
Q 012459          281 NLLTWALVLLAMH--QEWQIKAREEVFQVCGDNDLRLAEKL  319 (463)
Q Consensus       281 ~~l~~~l~~L~~~--p~~~~~l~~Ei~~~~~~~~~~~~~~~  319 (463)
                      -.++|++..|.+.  +.-++.+++.+.+.+..-..++.+.+
T Consensus        14 EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps~e~l   54 (80)
T PF10264_consen   14 EVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPSQEVL   54 (80)
T ss_pred             HHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCCHHHH
Confidence            3566666666553  56788888888888764444554443


No 73 
>PF15179 Myc_target_1:  Myc target protein 1
Probab=20.44  E-value=1.9e+02  Score=23.97  Aligned_cols=26  Identities=15%  Similarity=0.304  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012459            4 LLLLLLLLLTVIFIVIITSLLKFVYS   29 (463)
Q Consensus         4 ~~~~~~~~~~~~~~~il~~~~~~~~~   29 (463)
                      +..-+.|++.+++..+++.+++++.+
T Consensus        23 laF~vSm~iGLviG~li~~LltwlSR   48 (197)
T PF15179_consen   23 LAFCVSMAIGLVIGALIWALLTWLSR   48 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44455666666666666666655543


No 74 
>PF15050 SCIMP:  SCIMP protein
Probab=20.31  E-value=1.7e+02  Score=22.38  Aligned_cols=19  Identities=21%  Similarity=0.347  Sum_probs=8.5

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 012459            8 LLLLLTVIFIVIITSLLKF   26 (463)
Q Consensus         8 ~~~~~~~~~~~il~~~~~~   26 (463)
                      .|+++++.++++...+-.+
T Consensus         8 FWiiLAVaII~vS~~lglI   26 (133)
T PF15050_consen    8 FWIILAVAIILVSVVLGLI   26 (133)
T ss_pred             hHHHHHHHHHHHHHHHHHH
Confidence            3455555544444333333


No 75 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=20.26  E-value=1.3e+02  Score=18.10  Aligned_cols=18  Identities=11%  Similarity=-0.005  Sum_probs=14.4

Q ss_pred             HHHHHHHhcCHHHHHHHH
Q 012459          284 TWALVLLAMHQEWQIKAR  301 (463)
Q Consensus       284 ~~~l~~L~~~p~~~~~l~  301 (463)
                      .|.++-++++||+|.-+.
T Consensus        13 l~gl~~~l~DpdvqrgL~   30 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLG   30 (42)
T ss_pred             HHHHHHHHcCHHHHHHHH
Confidence            466788899999988765


Done!