Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>012460
MENSPVTVITSSEEEKEEGNGSKEKNIERGVAAKSKLDEYKEISDLTGFDNLKAMILAES
IMKRKKKRNRKKKKKDKTKLDSLYREVADLTGFENLKAMIEAEAPMRRKSSERMRGNLET
QFCAQENDTVNVAEEQGQLGEDDGLNKVEETERNGREEKRRRANRAKLDEYEKISDLSGF
DNLKAMIEAEAFMRRKKRNRKRKKREIEFCGQEDVSVSAEEEKGQLDKSQPLKVVEVSKP
ESVLTTEMDGSRHLFIDPAKDNEGASMGEPMPMVRVVGGNDGGNSFEVIDLCLSSTDDDK
SVSGVSLERSVEDMGKAVQTTATITGANDGVKSVEMNNLYSLRLEDDKPLSDMRLGRRVE
DTVSVGPIVGERQQKKRRKKTRVIEAKDKVEDARKENEAKYNVVLRMLLRKPRYFDPPGW
NSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012460
        (463 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2079859 - symbol:AT3G43590 species:3702 "Arabi...   188  9.9e-12   1
TAIR|locus:2098164 - symbol:AT3G43490 species:3702 "Arabi...   142  4.5e-08   2
UNIPROTKB|F1NI84 - symbol:CNBP "Cellular nucleic acid-bin...    98  0.00023   1


>TAIR|locus:2079859 [details] [associations]
            symbol:AT3G43590 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:AL391734 EMBL:AY099824 EMBL:BT002203
            IPI:IPI00517919 RefSeq:NP_189945.1 UniGene:At.36254
            ProteinModelPortal:Q9FYD1 SMR:Q9FYD1 IntAct:Q9FYD1 PRIDE:Q9FYD1
            EnsemblPlants:AT3G43590.1 GeneID:823456 KEGG:ath:AT3G43590
            TAIR:At3g43590 HOGENOM:HOG000071063 InParanoid:Q9FYD1 OMA:RECPNSS
            PhylomeDB:Q9FYD1 ProtClustDB:CLSN2684404 ArrayExpress:Q9FYD1
            Genevestigator:Q9FYD1 Uniprot:Q9FYD1
        Length = 551

 Score = 188 (71.2 bits), Expect = 9.9e-12, P = 9.9e-12
 Identities = 58/178 (32%), Positives = 90/178 (50%)

Query:   297 DDDKSVSGVSL---ERSVE--DMGKAVQTTATITGANDGVKSVEMNNLYSLRLEDDKPLS 351
             DDD++   +SL   E+++   D+G  + +  +   ++ GV S  M N    +++  +   
Sbjct:    36 DDDEANEDLSLKILEKALSRRDVGNKLDSDLS---SDSGVVSTVMVNGVKSKVKKSESSK 92

Query:   352 DMRLGRRVEDTVSVGPIVGEXXXXXXXXXXXVI-EAKD-KVE--DARKENEAKYNVVLRM 407
              M+  + +E    + PIV             V  E +D +VE  D  K  E   N+VL+ 
Sbjct:    93 KMKRNK-LEADHEI-PIVWNDQDEEKVVEEIVKGEGEDDEVERSDEPKTEETASNLVLKK 150

Query:   408 LLRKPRYFDPP--GWNSETCSNCGKENHTAATCKMQ-KQNKPCFLCGSFKHRWKNCKQ 462
             LLR  RYFDPP  GW S  C +CG++ HT+  C    K+ KPCF+CGS +H  K C +
Sbjct:   151 LLRGARYFDPPDAGWVS--CYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSK 206


>TAIR|locus:2098164 [details] [associations]
            symbol:AT3G43490 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003676
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AL138644
            IPI:IPI00541141 PIR:T47391 RefSeq:NP_189935.1 UniGene:At.53697
            ProteinModelPortal:Q9M241 SMR:Q9M241 PaxDb:Q9M241 PRIDE:Q9M241
            EnsemblPlants:AT3G43490.1 GeneID:823435 KEGG:ath:AT3G43490
            TAIR:At3g43490 PhylomeDB:Q9M241 Genevestigator:Q9M241
            Uniprot:Q9M241
        Length = 260

 Score = 142 (55.0 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
 Identities = 29/80 (36%), Positives = 43/80 (53%)

Query:   387 KDKVEDARKENEAKYNVVLRMLLRKPRYFDP--PGWNSETCSNCGKENHTAATCK-MQKQ 443
             +D V    ++ E   N V+  LLR  RYFDP   GW   TC +CG+++H   +C  +   
Sbjct:   107 EDVVRGEEEDGETTSNSVMTKLLRGARYFDPLDAGW--VTCYSCGEKDHITVSCPTLTNC 164

Query:   444 NKPCFLCGSFKHRWKNCKQV 463
              K CF+C S +H  + C +V
Sbjct:   165 RKSCFICASLEHGARQCTKV 184

 Score = 43 (20.2 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
 Identities = 14/50 (28%), Positives = 25/50 (50%)

Query:   101 EAEAPMRRKSSERMRGN-LETQ-----FCAQENDTVNVAEEQGQLGEDDG 144
             ++E     KS+++M+ N LE        C +  D  N+ E+  +  E+DG
Sbjct:    68 KSEEVKNSKSNKKMKRNKLEAANEIVTHCVERQDEDNMVEDVVRGEEEDG 117

 Score = 39 (18.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query:   320 TTATITG-ANDGVKSVEMNNLYSLRLEDDKPLSDMRLGRRVEDTVSV 365
             T A I   AN+ ++   +   +S R  D+K  SD+     V  TV V
Sbjct:    18 TVAIIDDEANEDLRLKILEKAFSRRNVDNKLDSDLSFDPGVVSTVMV 64


>UNIPROTKB|F1NI84 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
            GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AADN02013931
            IPI:IPI00819060 Ensembl:ENSGALT00000008010 ArrayExpress:F1NI84
            Uniprot:F1NI84
        Length = 105

 Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
 Identities = 18/48 (37%), Positives = 24/48 (50%)

Query:   416 DPPGWNSETCSNCGKENHTAATCKMQKQNKPCFLCGSFKHRWKNCKQV 463
             +P     + C NCGK  H A  C    + K C+ CG F H  K+C +V
Sbjct:    44 EPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTKV 90


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.130   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      463       381   0.00090  117 3  11 23  0.48    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  225 KB (2123 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.97u 0.13s 32.10t   Elapsed:  00:00:01
  Total cpu time:  31.97u 0.13s 32.10t   Elapsed:  00:00:01
  Start:  Fri May 10 14:41:02 2013   End:  Fri May 10 14:41:03 2013

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