Your job contains 1 sequence.
>012466
MQKREQGKSGGAAGGAATPAAKRGRPFGSTSGSSGGSGSAADSAAPTTLLGPSLQVHSSF
ADQNHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVID
DWRDIALPKELSKGPRARTLGVNSLVTGFGSEFEALGSINNAFPRSGVGSGSSAADSLVQ
KNAARVRSSEWWFDEDGLFNLDDEGRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCL
ETVFQCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSSKQSYIKITREKRAVEAIMGI
LGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMSLPAFDAQAAAVGALY
NLAEVNVDCRLKLASERWAIDRLLRVIKTPHPVPEVCRKAAMILESLVSEPQNRVLLLAY
ENAFAEILFSDGRYSDTFARILYELTSRPNNKVASARGIWGCG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012466
(463 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094618 - symbol:LFR "LEAF AND FLOWER RELATED"... 1646 2.8e-169 1
UNIPROTKB|J9PA03 - symbol:ARID2 "Uncharacterized protein"... 102 2.1e-07 3
UNIPROTKB|F1N463 - symbol:ARID2 "Uncharacterized protein"... 102 2.3e-07 3
UNIPROTKB|I3LU38 - symbol:ARID2 "Uncharacterized protein"... 102 2.3e-07 3
UNIPROTKB|Q68CP9 - symbol:ARID2 "AT-rich interactive doma... 102 2.7e-07 3
UNIPROTKB|E2RFL8 - symbol:ARID2 "Uncharacterized protein"... 102 2.8e-07 3
ZFIN|ZDB-GENE-030131-6311 - symbol:arid2 "AT rich interac... 103 3.4e-07 3
UNIPROTKB|E1C9H0 - symbol:ARID2 "Uncharacterized protein"... 98 7.3e-07 3
UNIPROTKB|F8WCU9 - symbol:ARID2 "AT-rich interactive doma... 102 1.5e-05 2
DICTYBASE|DDB_G0278395 - symbol:DDB_G0278395 species:4468... 103 0.00026 2
>TAIR|locus:2094618 [details] [associations]
symbol:LFR "LEAF AND FLOWER RELATED" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009908 "flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0006312 "mitotic recombination"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 PROSITE:PS50176
GO:GO:0005634 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009908 GO:GO:0048366 EMBL:AB026655
EMBL:AY072191 EMBL:AY096422 IPI:IPI00548723 RefSeq:NP_566721.1
UniGene:At.37780 ProteinModelPortal:Q9LS90 PRIDE:Q9LS90
EnsemblPlants:AT3G22990.1 GeneID:821873 KEGG:ath:AT3G22990
TAIR:At3g22990 InParanoid:Q9LS90 OMA:RAVQAIM PhylomeDB:Q9LS90
ProtClustDB:CLSN2688685 ArrayExpress:Q9LS90 Genevestigator:Q9LS90
Uniprot:Q9LS90
Length = 460
Score = 1646 (584.5 bits), Expect = 2.8e-169, P = 2.8e-169
Identities = 314/416 (75%), Positives = 367/416 (88%)
Query: 46 PTTLLGPSLQVHSSFADQNHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPL 105
P+ LLGPSL VH+SF +QN++RIVLALQSGLKSE+TWALNTLTLLSFKEK+D+R+D PL
Sbjct: 49 PSALLGPSLLVHNSFVEQNNRRIVLALQSGLKSEVTWALNTLTLLSFKEKEDIRRDVMPL 108
Query: 106 AKIPGLLDALLQVIDDWRDIALPKELSKGPRARTLGVNSLVTGFGSEFEALGSINNAFPR 165
AKI GLLDALL +IDDWRDIALPK+L++G R RTLG N+ VTGFG+E++AL SI P
Sbjct: 109 AKIAGLLDALLLIIDDWRDIALPKDLTRGTRVRTLGTNASVTGFGNEYDALASIQP--P- 165
Query: 166 XXXXXXXXAADSLVQKNAARVRSSEWWFDEDGLFNLDDEGRAEKQQCAVGASNIIRNFSF 225
AA++L +K+ + +SS+WW +EDGLFNLDDEGR+EKQ CA+ ASN+IRNFSF
Sbjct: 166 -GSGIGSSAAEALGKKSTGKHQSSQWWMEEDGLFNLDDEGRSEKQMCAIAASNVIRNFSF 224
Query: 226 MPDNEVIMAQHRHCLETVFQCIEDHVTEDEELVTNALETIVNLAPLLDLRIFSSSKQSYI 285
MPDNEV+MAQHRHCLETVFQCI DH+TEDEELVTN+LETIVNLA L+DLRIFSS KQSYI
Sbjct: 225 MPDNEVVMAQHRHCLETVFQCIHDHMTEDEELVTNSLETIVNLAHLMDLRIFSSLKQSYI 284
Query: 286 KITREKRAVEAIMGILGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQIHKRLVDLMS 345
I EK+AV+A++GIL S KAW+CAAAELLGRLIINPDNEPF+ P +PQIHKRL+DL+S
Sbjct: 285 NIN-EKKAVQAVVGILNSSVKAWNCAAAELLGRLIINPDNEPFISPLIPQIHKRLIDLLS 343
Query: 346 LPAFDAQAAAVGALYNLAEVNVDCRLKLASERWAIDRLLRVIKTPHPVPEVCRKAAMILE 405
+ A DAQAAAVGALYNL EVN+DCRLKLASERWA+DRLL+VIKTPHPVPEVCRKAAMILE
Sbjct: 344 IQAVDAQAAAVGALYNLVEVNMDCRLKLASERWAVDRLLKVIKTPHPVPEVCRKAAMILE 403
Query: 406 SLVSEPQNRVLLLAYENAFAEILFSDGRYSDTFARILYELTSRPNNKVASARGIWG 461
+LVSEPQNR LLLAYENAFAE+LF +G+YSD+FARILYELT+R N++VASARGIWG
Sbjct: 404 NLVSEPQNRGLLLAYENAFAELLFQEGKYSDSFARILYELTARSNSRVASARGIWG 459
>UNIPROTKB|J9PA03 [details] [associations]
symbol:ARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF02257 PROSITE:PS00028 PROSITE:PS51526
SMART:SM00355 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 CTD:196528
KO:K11765 GeneTree:ENSGT00390000016138 EMBL:AAEX03015115
EMBL:AAEX03015116 RefSeq:XP_003433601.1 Ensembl:ENSCAFT00000044680
GeneID:100688573 KEGG:cfa:100688573 Uniprot:J9PA03
Length = 1687
Score = 102 (41.0 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 54/209 (25%), Positives = 93/209 (44%)
Query: 188 SSEW-W---FDEDGLFNLDD-EGRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCLET 242
S EW W F ++D EG+ Q AV I+RN SF N ++A +R CL
Sbjct: 112 SGEWIWESLFHPPRKLGINDIEGQ-RVLQIAV----ILRNLSFEEGNVKLLAANRTCLRF 166
Query: 243 VFQCIEDHVTEDEELVTNALETIVNLAP--LLDLRIFSSSKQSYIKITREKRAVEAIMGI 300
+ H +L L+T+ N+A LLD F ++ + +T+ + + + +
Sbjct: 167 LLLSAHSHFISLRQL---GLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKM 223
Query: 301 LGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQ-IHKRLVDLMSLPAFDAQAAAVGAL 359
G E+LG L DN + +V Q ++ ++ ++LP + + L
Sbjct: 224 RGM----------EILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLEVL 273
Query: 360 YNLAEV-NVDCRLKLASERWAIDRLLRVI 387
Y L E+ +V C K+A +ID L+ ++
Sbjct: 274 YMLTEMGDVACT-KIAKVEKSIDMLVCLV 301
Score = 87 (35.7 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 64 NHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVIDD 121
++ ++VL+L SGL +E+ +A+N TLLS + K M+ + P KI LL A V DD
Sbjct: 8 DYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP--KIITLLLANAGVFDD 63
Score = 63 (27.2 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 392 PVPEVCR-KAAMILESLVSEPQ-NRVLLLAYENAFAEILFSDGRYSDTFARILYELTSRP 449
P+ + R AA+IL+++ + R LL +EN + + S+ S T A+ LYEL
Sbjct: 1615 PITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTV 1674
Query: 450 NNK 452
+K
Sbjct: 1675 QSK 1677
>UNIPROTKB|F1N463 [details] [associations]
symbol:ARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF02257 PROSITE:PS00028 PROSITE:PS51526
SMART:SM00355 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0006337
OMA:IQNSIPQ GeneTree:ENSGT00390000016138 EMBL:DAAA02013014
EMBL:DAAA02013015 EMBL:DAAA02013016 EMBL:DAAA02013017
EMBL:DAAA02013018 EMBL:DAAA02013019 EMBL:DAAA02013020
IPI:IPI00688026 Ensembl:ENSBTAT00000014719 Uniprot:F1N463
Length = 1739
Score = 102 (41.0 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 54/209 (25%), Positives = 93/209 (44%)
Query: 188 SSEW-W---FDEDGLFNLDD-EGRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCLET 242
S EW W F ++D EG+ Q AV I+RN SF N ++A +R CL
Sbjct: 166 SGEWIWESLFHPPRKLGINDIEGQ-RVLQIAV----ILRNLSFEEGNVKLLAANRTCLRF 220
Query: 243 VFQCIEDHVTEDEELVTNALETIVNLAP--LLDLRIFSSSKQSYIKITREKRAVEAIMGI 300
+ H +L L+T+ N+A LLD F ++ + +T+ + + + +
Sbjct: 221 LLLSAHSHFISLRQL---GLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKM 277
Query: 301 LGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQ-IHKRLVDLMSLPAFDAQAAAVGAL 359
G E+LG L DN + +V Q ++ ++ ++LP + + L
Sbjct: 278 RGM----------EILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLEVL 327
Query: 360 YNLAEV-NVDCRLKLASERWAIDRLLRVI 387
Y L E+ +V C K+A +ID L+ ++
Sbjct: 328 YMLTEMGDVACT-KIAKVEKSIDMLVCLV 355
Score = 87 (35.7 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 64 NHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVIDD 121
++ ++VL+L SGL +E+ +A+N TLLS + K M+ + P KI LL A V DD
Sbjct: 62 DYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP--KIITLLLANAGVFDD 117
Score = 63 (27.2 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 392 PVPEVCR-KAAMILESLVSEPQ-NRVLLLAYENAFAEILFSDGRYSDTFARILYELTSRP 449
P+ + R AA+IL+++ + R LL +EN + + S+ S T A+ LYEL
Sbjct: 1667 PITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTV 1726
Query: 450 NNK 452
+K
Sbjct: 1727 QSK 1729
>UNIPROTKB|I3LU38 [details] [associations]
symbol:ARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF02257 PROSITE:PS00028 PROSITE:PS51526
SMART:SM00355 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0006337
OMA:IQNSIPQ GeneTree:ENSGT00390000016138 EMBL:FP325231
Ensembl:ENSSSCT00000030858 Uniprot:I3LU38
Length = 1739
Score = 102 (41.0 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 54/209 (25%), Positives = 93/209 (44%)
Query: 188 SSEW-W---FDEDGLFNLDD-EGRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCLET 242
S EW W F ++D EG+ Q AV I+RN SF N ++A +R CL
Sbjct: 166 SGEWIWESLFHPPRKLGINDIEGQ-RVLQIAV----ILRNLSFEEGNVKLLAANRTCLRF 220
Query: 243 VFQCIEDHVTEDEELVTNALETIVNLAP--LLDLRIFSSSKQSYIKITREKRAVEAIMGI 300
+ H +L L+T+ N+A LLD F ++ + +T+ + + + +
Sbjct: 221 LLLSAHSHFISLRQL---GLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKM 277
Query: 301 LGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQ-IHKRLVDLMSLPAFDAQAAAVGAL 359
G E+LG L DN + +V Q ++ ++ ++LP + + L
Sbjct: 278 RGM----------EILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLEVL 327
Query: 360 YNLAEV-NVDCRLKLASERWAIDRLLRVI 387
Y L E+ +V C K+A +ID L+ ++
Sbjct: 328 YMLTEMGDVACT-KIAKVEKSIDMLVCLV 355
Score = 87 (35.7 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 64 NHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVIDD 121
++ ++VL+L SGL +E+ +A+N TLLS + K M+ + P KI LL A V DD
Sbjct: 62 DYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP--KIITLLLANAGVFDD 117
Score = 63 (27.2 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 392 PVPEVCR-KAAMILESLVSEPQ-NRVLLLAYENAFAEILFSDGRYSDTFARILYELTSRP 449
P+ + R AA+IL+++ + R LL +EN + + S+ S T A+ LYEL
Sbjct: 1667 PITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTV 1726
Query: 450 NNK 452
+K
Sbjct: 1727 QSK 1729
>UNIPROTKB|Q68CP9 [details] [associations]
symbol:ARID2 "AT-rich interactive domain-containing protein
2" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006337 "nucleosome disassembly" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01388 Pfam:PF02257 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355
SMART:SM00501 EMBL:DQ096628 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0016568 GO:GO:0006337
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AY727870 EMBL:AL832200
EMBL:BX537879 EMBL:CR749833 EMBL:AK027718 EMBL:AK127872
EMBL:BC090062 EMBL:AB046777 IPI:IPI00444237 IPI:IPI00470537
IPI:IPI00647133 RefSeq:NP_689854.2 UniGene:Hs.317304
ProteinModelPortal:Q68CP9 SMR:Q68CP9 DIP:DIP-33391N IntAct:Q68CP9
STRING:Q68CP9 PhosphoSite:Q68CP9 DMDM:73921721 PaxDb:Q68CP9
PRIDE:Q68CP9 DNASU:196528 Ensembl:ENST00000334344 GeneID:196528
KEGG:hsa:196528 UCSC:uc001ror.3 CTD:196528 GeneCards:GC12P046123
HGNC:HGNC:18037 MIM:609539 neXtProt:NX_Q68CP9 PharmGKB:PA134916396
eggNOG:NOG311317 HOVERGEN:HBG068777 InParanoid:Q68CP9 KO:K11765
OMA:IQNSIPQ OrthoDB:EOG49KFPP GenomeRNAi:196528 NextBio:89525
PMAP-CutDB:Q68CP9 ArrayExpress:Q68CP9 Bgee:Q68CP9
Genevestigator:Q68CP9 Uniprot:Q68CP9
Length = 1835
Score = 102 (41.0 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 54/209 (25%), Positives = 93/209 (44%)
Query: 188 SSEW-W---FDEDGLFNLDD-EGRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCLET 242
S EW W F ++D EG+ Q AV I+RN SF N ++A +R CL
Sbjct: 261 SGEWIWESLFHPPRKLGINDIEGQ-RVLQIAV----ILRNLSFEEGNVKLLAANRTCLRF 315
Query: 243 VFQCIEDHVTEDEELVTNALETIVNLAP--LLDLRIFSSSKQSYIKITREKRAVEAIMGI 300
+ H +L L+T+ N+A LLD F ++ + +T+ + + + +
Sbjct: 316 LLLSAHSHFISLRQL---GLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKM 372
Query: 301 LGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQ-IHKRLVDLMSLPAFDAQAAAVGAL 359
G E+LG L DN + +V Q ++ ++ ++LP + + L
Sbjct: 373 RGM----------EILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLEVL 422
Query: 360 YNLAEV-NVDCRLKLASERWAIDRLLRVI 387
Y L E+ +V C K+A +ID L+ ++
Sbjct: 423 YMLTEMGDVACT-KIAKVEKSIDMLVCLV 450
Score = 87 (35.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 64 NHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVIDD 121
++ ++VL+L SGL +E+ +A+N TLLS + K M+ + P KI LL A V DD
Sbjct: 157 DYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP--KIITLLLANAGVFDD 212
Score = 63 (27.2 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 392 PVPEVCR-KAAMILESLVSEPQ-NRVLLLAYENAFAEILFSDGRYSDTFARILYELTSRP 449
P+ + R AA+IL+++ + R LL +EN + + S+ S T A+ LYEL
Sbjct: 1763 PITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTV 1822
Query: 450 NNK 452
+K
Sbjct: 1823 QSK 1825
>UNIPROTKB|E2RFL8 [details] [associations]
symbol:ARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003150
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF01388 Pfam:PF02257
PROSITE:PS00028 PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355
SMART:SM00501 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622 GO:GO:0006337
Gene3D:1.10.150.60 SUPFAM:SSF46774 OMA:IQNSIPQ
GeneTree:ENSGT00390000016138 EMBL:AAEX03015115 EMBL:AAEX03015116
Ensembl:ENSCAFT00000014865 Uniprot:E2RFL8
Length = 1836
Score = 102 (41.0 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 54/209 (25%), Positives = 93/209 (44%)
Query: 188 SSEW-W---FDEDGLFNLDD-EGRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCLET 242
S EW W F ++D EG+ Q AV I+RN SF N ++A +R CL
Sbjct: 261 SGEWIWESLFHPPRKLGINDIEGQ-RVLQIAV----ILRNLSFEEGNVKLLAANRTCLRF 315
Query: 243 VFQCIEDHVTEDEELVTNALETIVNLAP--LLDLRIFSSSKQSYIKITREKRAVEAIMGI 300
+ H +L L+T+ N+A LLD F ++ + +T+ + + + +
Sbjct: 316 LLLSAHSHFISLRQL---GLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKM 372
Query: 301 LGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQ-IHKRLVDLMSLPAFDAQAAAVGAL 359
G E+LG L DN + +V Q ++ ++ ++LP + + L
Sbjct: 373 RGM----------EILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLEVL 422
Query: 360 YNLAEV-NVDCRLKLASERWAIDRLLRVI 387
Y L E+ +V C K+A +ID L+ ++
Sbjct: 423 YMLTEMGDVACT-KIAKVEKSIDMLVCLV 450
Score = 87 (35.7 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 64 NHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVIDD 121
++ ++VL+L SGL +E+ +A+N TLLS + K M+ + P KI LL A V DD
Sbjct: 157 DYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP--KIITLLLANAGVFDD 212
Score = 63 (27.2 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 392 PVPEVCR-KAAMILESLVSEPQ-NRVLLLAYENAFAEILFSDGRYSDTFARILYELTSRP 449
P+ + R AA+IL+++ + R LL +EN + + S+ S T A+ LYEL
Sbjct: 1764 PITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTV 1823
Query: 450 NNK 452
+K
Sbjct: 1824 QSK 1826
>ZFIN|ZDB-GENE-030131-6311 [details] [associations]
symbol:arid2 "AT rich interactive domain 2 (ARID,
RFX-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR016024 Pfam:PF01388 Pfam:PF02257
PROSITE:PS00028 PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355
SMART:SM00501 ZFIN:ZDB-GENE-030131-6311 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006355 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CR847994 EMBL:AL929171
GeneTree:ENSGT00390000016138 IPI:IPI00933367
Ensembl:ENSDART00000113360 Uniprot:E7F3J3
Length = 1573
Score = 103 (41.3 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 53/189 (28%), Positives = 88/189 (46%)
Query: 205 GRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCLETVFQCIEDHVTEDEELVTNALET 264
G E Q+ + + I+RN SF N ++A +R CL + C H T + L L+T
Sbjct: 280 GDVEGQR-VLQVAMILRNLSFEEANIKLLAANRTCLRFLLLCA--HCTFIQ-LRQLGLDT 335
Query: 265 IVNLAPLLDLRI--FSSSKQSYIKITREKRAVEAIMGILGSPFKAWHCAAAELLGRLIIN 322
+ N A L L F ++ + IT+ L S + A E+LG L
Sbjct: 336 LGNFAGELQLDPVDFRTTHLMFHTITK----------CLLSRDRFLKMRAMEILGNLSKV 385
Query: 323 PDNEPFLLPFVPQ-IHKRLVDLMSLPAFDAQAAAVGALYNLAEVN-VDCRLKLASERWAI 380
DN + +V Q ++ ++ L++LP +A+ LY LAE+ + C K++S +I
Sbjct: 386 EDNGVLICEYVDQESYREIIALLTLPDVMLVISALEVLYQLAELGEITCS-KISSVERSI 444
Query: 381 --DRLLRVI 387
D L+R++
Sbjct: 445 GEDLLVRLV 453
Score = 87 (35.7 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 64 NHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVIDD 121
++ ++VL+L SGL +E+ +A+N TLLS + K M+ + P K+ LL A V DD
Sbjct: 157 DYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHAMQLEKEP--KLVTLLLAHAGVFDD 212
Score = 59 (25.8 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 392 PVPEVCR-KAAMILESLVSEPQ-NRVLLLAYENAFAEILFSDGRYSDTFARILYELT 446
PV + R AA+ L+++ R ++ +EN + + S S T A+ LYELT
Sbjct: 1512 PVTKHIRLTAALTLKNIAKYSDCGRKMVKRHENHLSVLALSSMEVSTTLAKCLYELT 1568
>UNIPROTKB|E1C9H0 [details] [associations]
symbol:ARID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003150 InterPro:IPR007087
InterPro:IPR015880 Pfam:PF01388 Pfam:PF02257 PROSITE:PS00028
PROSITE:PS51011 PROSITE:PS51526 SMART:SM00355 SMART:SM00501
GO:GO:0006355 GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0005622 GO:GO:0006337 Gene3D:1.10.150.60
SUPFAM:SSF46774 OMA:IQNSIPQ GeneTree:ENSGT00390000016138
EMBL:AADN02010001 EMBL:AADN02010002 EMBL:AADN02010003
IPI:IPI00593469 Ensembl:ENSGALT00000015735 Uniprot:E1C9H0
Length = 1831
Score = 98 (39.6 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 57/236 (24%), Positives = 101/236 (42%)
Query: 186 VRSSEW-W---FDEDGLFNLDD-EGRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCL 240
+ S +W W F ++D EG+ Q AV I+RN SF N ++A +R CL
Sbjct: 259 IPSEDWIWESLFHPPRKLGINDIEGQ-RVLQIAV----ILRNLSFEEGNVKLLAANRTCL 313
Query: 241 ETVFQCIEDHVTEDEELVTNALETIVNLAP--LLDLRIFSSSKQSYIKITREKRAVEAIM 298
+ H +L L+T+ N+A LLD F ++ + +T+ + + +
Sbjct: 314 RFLLLSAHSHFISLRQL---GLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFL 370
Query: 299 GILGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQ-IHKRLVDLMSLPAFDAQAAAVG 357
+ G E+L L DN + +V Q +K ++ ++LP +A+
Sbjct: 371 KMRGM----------EILANLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISALE 420
Query: 358 ALYNLAEVN-VDCRLKLASERWAIDRLLRVIKTPHPV--PEVCRKAAMILESLVSE 410
LY L E+ V C K++ +ID L+ ++ + P+ +I VS+
Sbjct: 421 VLYMLTEMGEVACT-KISKVEKSIDTLVCLVSMDIQMFGPDALTAVKLIEHQCVSQ 475
Score = 87 (35.7 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 64 NHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVIDD 121
++ ++VL+L SGL +E+ +A+N TLLS + K M+ + P KI LL A V DD
Sbjct: 157 DYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP--KIITLLLANAGVFDD 212
Score = 63 (27.2 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 392 PVPEVCR-KAAMILESLVSEPQ-NRVLLLAYENAFAEILFSDGRYSDTFARILYELTSRP 449
P+ + R AA+IL+++ + R LL +EN + + S+ S T A+ LYEL
Sbjct: 1759 PITKHIRLTAALILKNIGKYSECGRRLLKRHENHLSVLAISNMEASSTLAKCLYELNFTV 1818
Query: 450 NNK 452
+K
Sbjct: 1819 QSK 1821
>UNIPROTKB|F8WCU9 [details] [associations]
symbol:ARID2 "AT-rich interactive domain-containing protein
2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR003150
InterPro:IPR007087 InterPro:IPR015880 Pfam:PF02257 PROSITE:PS00028
PROSITE:PS51526 SMART:SM00355 GO:GO:0006355 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005622
HGNC:HGNC:18037 EMBL:AC008124 EMBL:AC009464 EMBL:AC009777
IPI:IPI00884387 Ensembl:ENST00000422737 ArrayExpress:F8WCU9
Bgee:F8WCU9 Uniprot:F8WCU9
Length = 1639
Score = 102 (41.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 54/209 (25%), Positives = 93/209 (44%)
Query: 188 SSEW-W---FDEDGLFNLDD-EGRAEKQQCAVGASNIIRNFSFMPDNEVIMAQHRHCLET 242
S EW W F ++D EG+ Q AV I+RN SF N ++A +R CL
Sbjct: 112 SGEWIWESLFHPPRKLGINDIEGQ-RVLQIAV----ILRNLSFEEGNVKLLAANRTCLRF 166
Query: 243 VFQCIEDHVTEDEELVTNALETIVNLAP--LLDLRIFSSSKQSYIKITREKRAVEAIMGI 300
+ H +L L+T+ N+A LLD F ++ + +T+ + + + +
Sbjct: 167 LLLSAHSHFISLRQL---GLDTLGNIAAELLLDPVDFKTTHLMFHTVTKCLMSRDRFLKM 223
Query: 301 LGSPFKAWHCAAAELLGRLIINPDNEPFLLPFVPQ-IHKRLVDLMSLPAFDAQAAAVGAL 359
G E+LG L DN + +V Q ++ ++ ++LP + + L
Sbjct: 224 RGM----------EILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLEVL 273
Query: 360 YNLAEV-NVDCRLKLASERWAIDRLLRVI 387
Y L E+ +V C K+A +ID L+ ++
Sbjct: 274 YMLTEMGDVACT-KIAKVEKSIDMLVCLV 301
Score = 87 (35.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 64 NHKRIVLALQSGLKSELTWALNTLTLLSFKEKDDMRKDATPLAKIPGLLDALLQVIDD 121
++ ++VL+L SGL +E+ +A+N TLLS + K M+ + P KI LL A V DD
Sbjct: 8 DYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDP--KIITLLLANAGVFDD 63
>DICTYBASE|DDB_G0278395 [details] [associations]
symbol:DDB_G0278395 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR016024 dictyBase:DDB_G0278395 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AAFI02000023
RefSeq:XP_642339.1 EnsemblProtists:DDB0205425 GeneID:8621545
KEGG:ddi:DDB_G0278395 OMA:ITICHYP Uniprot:Q54Y63
Length = 588
Score = 103 (41.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 334 PQIHKRLVDLMSLPAFDAQAAAVGALYNLAEVNVDCRLKLASERWAIDRLLRVIKTPHPV 393
P + R+V+L+S Q ++ L L++ + R+ + + L+ ++ T P
Sbjct: 468 PNLISRVVELLSHSHQSIQLLSIQILSTLSKSSQKLRITICHYPGLVRHLINLL-THKPT 526
Query: 394 ---PEVCRKAAMILESLVSEPQNRVLLLAYENAFAEILFSDGRYSDTFARILYELTSRPN 450
E+ ++AA +L L E N +LL +E A+I +D +SD IL + N
Sbjct: 527 GENAEISKRAASLLSRLSKESYNLPILLPFETTLAQIALTDNPHSDIITNILVRFEIKNN 586
Score = 64 (27.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 50 LGPSLQVHSSFADQNHKRIVLALQSGLKSELTWALNTLTLLSFKEK----DDMRKD-ATP 104
L +QVHS + R+V L S ++ +ALN+L S++EK + KD
Sbjct: 31 LNKRIQVHSYLS-----RLVDYLLSKDDKKIDFALNSLLTKSYQEKLIFSISIEKDFKET 85
Query: 105 LAKIPGLLDALLQVI 119
+ IP +LD+LL I
Sbjct: 86 MFPIPSILDSLLNAI 100
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 463 417 0.00082 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 623 (66 KB)
Total size of DFA: 256 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.62u 0.10s 31.72t Elapsed: 00:00:01
Total cpu time: 31.62u 0.10s 31.72t Elapsed: 00:00:01
Start: Fri May 10 15:03:54 2013 End: Fri May 10 15:03:55 2013