BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012467
(463 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/454 (65%), Positives = 351/454 (77%), Gaps = 1/454 (0%)
Query: 10 GTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSS 69
GT+FYHGHLGMQRSAGLYGSLIVD G+KEPFHYDGE NLLLSDWWH+S+H+QEVGLSS
Sbjct: 99 GTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSS 158
Query: 70 RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLR 129
+P+RWIGEPQT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+R
Sbjct: 159 KPIRWIGEPQTILLNGRGQFDCSIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIR 217
Query: 130 IXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYW 189
I + NH+++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW
Sbjct: 218 IASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYW 277
Query: 190 ISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP 249
+S G R R P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSP
Sbjct: 278 VSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSP 337
Query: 250 KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENF 309
KPP F+RR+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F
Sbjct: 338 KPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVF 397
Query: 310 SNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVL 369
+YD+ PP N T +G+GVY + VDVILQNAN ++ NLSE HPWHLHGHDFWVL
Sbjct: 398 PEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVL 457
Query: 370 GRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGM 429
G G+GKF+ E+E T VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GM
Sbjct: 458 GYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGM 517
Query: 430 GVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463
GVV A GVE VG IP +ALACG T K +N +N
Sbjct: 518 GVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 177/439 (40%), Gaps = 85/439 (19%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
AGT++YH H G Q GL G +++ D D + D E ++ L+DW+H
Sbjct: 102 HAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYH-------- 153
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
+ + ++ +P LING+G++ AA S I++V+ K
Sbjct: 154 -IPAPSIQGAAQPDATLINGKGRYVGGPAAELS------------------IVNVEQGKK 194
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR+R+ + H++ ++E DG +P VD + I++G+ YS +L NQ P
Sbjct: 195 YRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PV 253
Query: 186 YNYWISAGV-RGRKP-----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 239
NYWI A +GR A +L Y + + S P + ++ D
Sbjct: 254 DNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALID 313
Query: 240 NKIFALMGSPKP-PTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGL 296
A G P P + + R L GF+ ++ IN + P P L I G
Sbjct: 314 P---AAPGIPTPGAADVNLRFQL--------GFSGGRFTINGTAYESPSVPTLLQIMSGA 362
Query: 297 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSE 355
+ +AN L +G VY L N V++++ P
Sbjct: 363 Q-----------------------SANDLLPAGSVYELPRNQVVELVVPAGVLGGP---- 395
Query: 356 IHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 415
HP+HLHGH F V+ R G T T +RFV DNPG W
Sbjct: 396 -HPFHLHGHAFSVV-RSAGSSTYNFVNPVKRDVVSLGVTG-----DEVTIRFVTDNPGPW 448
Query: 416 AFHCHIEPHFHIGMGVVLA 434
FHCHIE H G+ +V A
Sbjct: 449 FFHCHIEFHLMNGLAIVFA 467
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 177/439 (40%), Gaps = 85/439 (19%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
AGT++YH H G Q GL G +++ D D + D E ++ L+DW+H
Sbjct: 102 HAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYH-------- 153
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
+ + ++ +P LING+G++ AA S I++V+ K
Sbjct: 154 -IPAPSIQGAAQPDATLINGKGRYVGGPAAELS------------------IVNVEQGKK 194
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR+R+ + H++ ++E DG +P VD + I++G+ YS +L NQ P
Sbjct: 195 YRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PV 253
Query: 186 YNYWISAGV-RGRKP-----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 239
NYWI A +GR A +L Y + + S P + ++ D
Sbjct: 254 DNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALID 313
Query: 240 NKIFALMGSPKP-PTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGL 296
A G P P + + R L GF+ ++ IN + P P L I G
Sbjct: 314 P---AAPGIPTPGAADVNLRFQL--------GFSGGRFTINGTAYESPSVPTLLQIMSGA 362
Query: 297 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSE 355
+ +AN L +G VY L N V++++ P
Sbjct: 363 Q-----------------------SANDLLPAGSVYELPRNQVVELVVPAGVLGGP---- 395
Query: 356 IHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 415
HP+HLHGH F V+ R G T T +RFV DNPG W
Sbjct: 396 -HPFHLHGHAFSVV-RSAGSSTYNFVNPVKRDVVSLGVTG-----DEVTIRFVTDNPGPW 448
Query: 416 AFHCHIEPHFHIGMGVVLA 434
FHCHIE H G+ +V A
Sbjct: 449 FFHCHIEFHLMNGLAIVFA 467
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 174/444 (39%), Gaps = 83/444 (18%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G ++V D D K + D + ++ L+DW+H
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPIVVYDPQDPHKSLYDVDDDSTVITLADWYH-------- 153
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
L+++ + LING G+ +L A + ++ V K
Sbjct: 154 -LAAKVGSPVPTADATLINGLGRSIDTLNADLA------------------VITVTKGKR 194
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + H + V+EAD ++P VD + I++ + YS +L +QD
Sbjct: 195 YRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSFVLNADQDVG 254
Query: 186 YNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDDYDHSKSFSN 240
NYWI A G R A+ L Y P+ P TP + S +
Sbjct: 255 -NYWIRALPNSGTRNFDGGVNSAI--LRYD----GAAPVEPTTSQTPSTNPLVESALTTL 307
Query: 241 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKD 298
+ A GSP P L L N GF K+ IN S T P P L I G +
Sbjct: 308 EGTAAPGSPAPGG---VDLAL----NMAFGFAGGKFTINGASFTPPTVPVLLQILSGAQS 360
Query: 299 AFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIH 357
A D L SG VY L N +++ L A A P H
Sbjct: 361 AQD-----------------------LLPSGSVYSLPANADIEISLP-ATAAAPGFP--H 394
Query: 358 PWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAF 417
P+HLHGH F V+ R G T E P +RF DNPG W
Sbjct: 395 PFHLHGHTFAVV-RSAGSSTYNYENPVYRDVVSTGS-----PGDNVTIRFRTDNPGPWFL 448
Query: 418 HCHIEPHFHIGMGVVLALGVETVG 441
HCHI+ H G VV+A + V
Sbjct: 449 HCHIDFHLEAGFAVVMAEDIPEVA 472
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 173/443 (39%), Gaps = 81/443 (18%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G ++V D D + D + ++ L+DW+H
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVDDDSTVITLADWYH-------- 153
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
L+++ + LING G+ +LAA + ++ V K
Sbjct: 154 -LAAKVGAPVPTADATLINGLGRSAATLAADLA------------------VITVTKGKR 194
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + H + V+EAD ++P VD + I++ + YS +L +QD
Sbjct: 195 YRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVD 254
Query: 186 YNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDDYDHSKSFSN 240
NYWI A G + T A +L Y P+ P TP + S +
Sbjct: 255 -NYWIRALPNSGTQNFAGGTNSA--ILRYD----GAAPVEPTTSQTPSTNPLVESALTTL 307
Query: 241 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKD 298
K A GSP P L L N GF + IN S T P P L I G +
Sbjct: 308 KGTAAPGSPTPGG---VDLAL----NMAFGFAGGNFTINGASFTPPTVPVLLQILSGAQS 360
Query: 299 AFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHP 358
A D + P VY L N +++ L A A P HP
Sbjct: 361 AAD--------------LLP--------AGSVYSLPANADIEISLP-ATAAAPGFP--HP 395
Query: 359 WHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFH 418
+HLHGH F V+ R G T + P +RF DNPG W H
Sbjct: 396 FHLHGHVFAVV-RSAGSSTYN-----YANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLH 449
Query: 419 CHIEPHFHIGMGVVLALGVETVG 441
CHI+ H G VV+A + V
Sbjct: 450 CHIDFHLEAGFAVVMAEDIPDVA 472
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 173/443 (39%), Gaps = 81/443 (18%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G ++V D D + D + ++ L+DW+H
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPIVVYDPNDPHASLYDVDDDSTVITLADWYH-------- 153
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
L+++ + LING G+ +LAA + ++ V K
Sbjct: 154 -LAAKVGAPVPTADATLINGLGRSAATLAADLA------------------VITVTKGKR 194
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + H + V+EAD ++P VD + I++ + YS +L +QD
Sbjct: 195 YRFRLVSLSCDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVD 254
Query: 186 YNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDDYDHSKSFSN 240
NYWI A G + T A +L Y P+ P TP + S +
Sbjct: 255 -NYWIRALPNSGTQNFAGGTNSA--ILRYD----GAAPVEPTTSQTPSTNPLVESALTTL 307
Query: 241 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKD 298
K A GSP P L L N GF + IN S T P P L I G +
Sbjct: 308 KGTAAPGSPTPGG---VDLAL----NMAFGFAGGNFTINGASFTPPTVPVLLQILSGAQS 360
Query: 299 AFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHP 358
A D + P VY L N +++ L A A P HP
Sbjct: 361 AAD--------------LLP--------AGSVYSLPANADIEISLP-ATAAAPGFP--HP 395
Query: 359 WHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFH 418
+HLHGH F V+ R G T + P +RF DNPG W H
Sbjct: 396 FHLHGHVFAVV-RSAGSSTYN-----YANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLH 449
Query: 419 CHIEPHFHIGMGVVLALGVETVG 441
CHI+ H G VV+A + V
Sbjct: 450 CHIDFHLEAGFAVVMAEDIPDVA 472
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 165/437 (37%), Gaps = 81/437 (18%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + D E ++ L+DW+H V
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHANLYDVDDESTVITLADWYH-------V 154
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
P R+ + LING G+ + A + ++ V K
Sbjct: 155 AAKLGP-RFPKGADSTLINGLGRSTSTPTADLA------------------VISVTKGKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + +H++ V+EADG QP VD + I++ + YS +L NQD
Sbjct: 196 YRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVD 255
Query: 186 YNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNK 241
NYWI A G G A +L Y P+ P + +
Sbjct: 256 -NYWIRANPNFGTTGFADGVNSA--ILRYDDAD---------PVEPVTNQTGTTLLLETD 303
Query: 242 IFALMGSPKP--PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDA 299
+ L P P PT L LN +G T + IN S T P P L I G A
Sbjct: 304 LHPLTSMPVPGNPTQGGADLN-LNMAFNFDG-TNFFINGESFTPPTVPVLLQIISGANTA 361
Query: 300 FDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHP 358
D L SG VY L N+++++ A HP
Sbjct: 362 QD-----------------------LLPSGSVYSLPSNSSIEITFPATTAAP---GAPHP 395
Query: 359 WHLHGHDFWVL-GRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAF 417
+HLHGH F V+ G + +D +RF DNPG W
Sbjct: 396 FHLHGHVFAVVRSAGSTSYNYDDPVWRDVVSTGTPQAG-----DNVTIRFQTDNPGPWFL 450
Query: 418 HCHIEPHFHIGMGVVLA 434
HCHI+ H G VV+A
Sbjct: 451 HCHIDFHLDAGFAVVMA 467
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 173/451 (38%), Gaps = 85/451 (18%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
AGTY+YH HL Q GL G +V D D + + D + ++ L+DW+H E
Sbjct: 103 MAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEMGA 162
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
G + + LI+G G+ + ++AA ++ V+ K
Sbjct: 163 GGAITA-------DSTLIDGLGRTHVNVAA-----------------VPLSVITVEVGKR 198
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR+R+ + H M ++E DG Q VD++ I++ + YS +L NQ P
Sbjct: 199 YRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVLNANQ-PV 257
Query: 186 YNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNK 241
NYWI A G G A +L Y + + P+T H+K
Sbjct: 258 GNYWIRANPNSGGEGFDGGINSA--ILRYDGATTAD------PVTVA--STVHTKCLIET 307
Query: 242 IFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDA 299
+ P N H+ N ++ GF + IN VS T P P L I G A
Sbjct: 308 DLHPLSRNGVPGNPHQGGADCNLNLSL-GFACGNFVINGVSFTPPTVPVLLQICSGANTA 366
Query: 300 FDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHP 358
D L SG V L N+T+++ L A P HP
Sbjct: 367 AD-----------------------LLPSGSVISLPSNSTIEIALPAGAAGGP-----HP 398
Query: 359 WHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFH 418
+HLHGHDF V + D+ + +RF DNPG W H
Sbjct: 399 FHLHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNV------TIRFCTDNPGPWFLH 452
Query: 419 CHIEPHFHIGMGVVLALGVETVGNIPNQALA 449
CHI+ H G +V A +IPN A A
Sbjct: 453 CHIDWHLDAGFAIVFA------EDIPNTASA 477
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 175/444 (39%), Gaps = 91/444 (20%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G L+V D +D + D + ++ LSDW+H + ++
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPLVVYDPSDPYASMYDVDDDTTVITLSDWYHTAA---KL 158
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
G + P ++LING G+F + G+A ++ V+ NK
Sbjct: 159 GPAFPP-----NADSVLINGLGRF--------AGGNASDLA----------VITVEQNKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + H M ++E DG +P EVD + I++ + YS +L Q
Sbjct: 196 YRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSVD 255
Query: 186 YNYWISAGVRGRKPATPPAL--TLLNY------HPT---SASKIPLSPPPITPRWDDYDH 234
NYWI A T L +L Y PT + S IPL + P
Sbjct: 256 -NYWIRAIPNTGTIDTTGGLNSAILRYSGADIVDPTANATTSVIPLVETDLVP------- 307
Query: 235 SKSFSNKIFALMGSPKPPTN--FHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSI 292
+ SP P + +N + NG T + INN +L P P L I
Sbjct: 308 -----------LDSPAAPGDPVVGGVDLAMNLDFSFNG-TNFFINNETLIPPTVPVLLQI 355
Query: 293 KYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI--LQNANAIR 350
G + A D + P VY L LN+T+++ + N +
Sbjct: 356 LSGAQSASD--------------LLP--------TGSVYTLPLNSTIELSFPITTVNGVT 393
Query: 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVAD 410
HP+HLHGH F V+ R G D T P +RF D
Sbjct: 394 NAPGAPHPFHLHGHAFSVV-RSAG---SSDYNYVNPVRRDTVSTG--NPGDNVTIRFTTD 447
Query: 411 NPGAWAFHCHIEPHFHIGMGVVLA 434
N G W HCHI+ H G +V A
Sbjct: 448 NAGPWFLHCHIDFHLEAGFAIVFA 471
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 170/448 (37%), Gaps = 90/448 (20%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + D E ++ L+DW+H + +
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPKDPHASRYDVDNESTVITLTDWYHTAA---RL 158
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
G P +G TL ING G+ + A + +++VQ K
Sbjct: 159 G----PRFPLGADATL-INGLGRSASTPTAALA------------------VINVQHGKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + H + V+E DG QP VD + I++ + YS +L NQ
Sbjct: 196 YRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQRYSFVLNANQTVG 255
Query: 186 YNYWISA----GVRGRKPATPPALTLLNYHPT-------SASKIPLSPPPITPRWDDYDH 234
NYWI A G G A+ P + S IPL + P
Sbjct: 256 -NYWIRANPNFGTVGFAGGINSAILRYQGAPVAEPTTTQTTSVIPLIETNLHP------- 307
Query: 235 SKSFSNKIFALMGSPKPPT--NFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSI 292
A M P PT + L L N N F INN S T P P L I
Sbjct: 308 --------LARMPVPGSPTPGGVDKALNLAFNFNGTNFF----INNASFTPPTVPVLLQI 355
Query: 293 KYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 352
G + A D + P VY L ++T+++ L A A+ P
Sbjct: 356 LSGAQTAQD--------------LLP--------AGSVYPLPAHSTIEITLP-ATALAPG 392
Query: 353 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNP 412
HP+HLHGH F V+ R G T A +RF DNP
Sbjct: 393 AP--HPFHLHGHAFAVV-RSAGSTTYNYNDPIFRDVVSTGTPAA---GDNVTIRFQTDNP 446
Query: 413 GAWAFHCHIEPHFHIGMGVVLALGVETV 440
G W HCHI+ H G +V A V V
Sbjct: 447 GPWFLHCHIDFHLEAGFAIVFAEDVADV 474
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 166/443 (37%), Gaps = 94/443 (21%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + D + ++ L+DW+H V
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASLYDIDNDDTVITLADWYH-------V 154
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
P G TL ING G + G ++ V K
Sbjct: 155 AAKLGPRFPFGSDSTL-INGLG------------------RTTGIAPSDLAVIKVTQGKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + NH M ++EAD QP EVD + I++ + YS +L +Q P
Sbjct: 196 YRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSFVLDASQ-PV 254
Query: 186 YNYWISA----GVRGRKPATPPALTLLN----YHPTSASKIPLSP------PPITPRWDD 231
NYWI A G G A+ + PTS P P P++P
Sbjct: 255 DNYWIRANPAFGNTGFAGGINSAILRYDGAPEIEPTSVQTTPTKPLNEVDLHPLSP---- 310
Query: 232 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGS 291
+ GSP+ P + L L+ N N F IN+ + P P L
Sbjct: 311 -----------MPVPGSPE-PGGVDKPLNLVFNFNGTNFF----INDHTFVPPSVPVLLQ 354
Query: 292 IKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 351
I G + A Q+ PE V++L N+++++ A A P
Sbjct: 355 ILSGAQAA--QDLVPE--------------------GSVFVLPSNSSIEISFP-ATANAP 391
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 411
HP+HLHGH F V+ D P +RF +N
Sbjct: 392 GFP--HPFHLHGHAFAVVRSAGSSVYNYDNPIFRDVVSTGQ------PGDNVTIRFETNN 443
Query: 412 PGAWAFHCHIEPHFHIGMGVVLA 434
PG W HCHI+ H G VV+A
Sbjct: 444 PGPWFLHCHIDFHLDAGFAVVMA 466
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 165/454 (36%), Gaps = 98/454 (21%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGTY+YH HL Q GL G+ +V D D + D ++ ++DW+H
Sbjct: 123 QAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYH----SLST 178
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
L P + P T LING G+ + +N SA Q ++ VQ K
Sbjct: 179 VLFPNPNKAPPAPDTTLINGLGR-------NSANPSAGQLA----------VVSVQSGKR 221
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR RI + H+M V+E DG QP VD + I++G+ YSV++ NQ
Sbjct: 222 YRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVG 281
Query: 186 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 245
NYWI A P + ++ IF
Sbjct: 282 -NYWIRA---------------------------------NPSNGRNGFTGGINSAIFRY 307
Query: 246 MGSP-KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNG 304
G+ PT T LN N I A P P G L +N
Sbjct: 308 QGAAVAEPTTSQNSGTALNEANLIPLINPGA--------PGNPVPGGADINLNLRIGRNA 359
Query: 305 PPENFSNEYDVMKPP------------VNANTTL-GSGVYMLGLNTTVDVILQNANAIRP 351
+F+ PP N N L G V L N +++ +
Sbjct: 360 TTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPGGGN--- 416
Query: 352 NLSEIHPWHLHGHDFWVLGR-GEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVAD 410
HP+HLHGH+F V+ G + + V F RFV D
Sbjct: 417 -----HPFHLHGHNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTF-------RFVTD 464
Query: 411 NPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIP 444
NPG W HCHI+ H G+ VV A E + NIP
Sbjct: 465 NPGPWFLHCHIDWHLEAGLAVVFA---EDIPNIP 495
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 161/434 (37%), Gaps = 82/434 (18%)
Query: 9 AGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLS 68
GTY+YH H Q G+ G I+ + P+ YD E +L LS+W+H V +
Sbjct: 99 VGTYWYHSHTDGQYEDGMKGLFIIK---DDSFPYDYDEELSLSLSEWYHDLVTDLTKSFM 155
Query: 69 S--RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTY 126
S P PQ L++N VQP+ TY
Sbjct: 156 SVYNPTGAEPIPQNLIVNNTMNLTWE---------------------------VQPDTTY 188
Query: 127 RLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSY 186
LRI +++H+M VVE DG + D + I + Y+VL+ T D
Sbjct: 189 LLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVHTKNDTDK 248
Query: 187 NYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIF--- 243
N+ I P+ LN + S + + P + D +F + +
Sbjct: 249 NFAIMQKFDDTMLDVIPSDLQLN----ATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQP 304
Query: 244 ----ALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDA 299
A+ G P H + N NG NN++ T P P L ++
Sbjct: 305 YEKEAIYGEPD-----HVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVL------ 353
Query: 300 FDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPW 359
+G N S Y +NT ++L + V+++L N + + HP+
Sbjct: 354 --SSGDQANNSEIY-------GSNT----HTFILEKDEIVEIVLNNQD------TGTHPF 394
Query: 360 HLHGHDFWVLGR--------GEGKFTKE-DEXXXXXXXXXXXXTAVIFPYGWTALRFVAD 410
HLHGH F + R GE + + D T + P +RF AD
Sbjct: 395 HLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD 454
Query: 411 NPGAWAFHCHIEPH 424
NPG W FHCHIE H
Sbjct: 455 NPGVWFFHCHIEWH 468
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 169/452 (37%), Gaps = 92/452 (20%)
Query: 7 VQAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQE 64
+QAGT++YH HL Q G G +V D D + D ++ L+DW+H +
Sbjct: 101 IQAGTFWYHSHLSTQYCDGDRGPFVVYDPNDPSANLYDVDNLNTVITLTDWYHTAAQNGP 160
Query: 65 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 124
++P G LING+G+ S +A + ++ V K
Sbjct: 161 ----AKP----GGADATLINGQGRGPSSPSADLA------------------VISVTAGK 194
Query: 125 TYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP 184
YR R+ + H+M +++ D VQP V + IY+ + YS +L NQ
Sbjct: 195 RYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSFILNANQAV 254
Query: 185 SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFA 244
+ NYWI A P + + ++ I
Sbjct: 255 N-NYWIRA---------------------------------NPNQGNVGFTNGINSAILR 280
Query: 245 LMGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQ 302
G+ +P T+ + L+ Q ++ T A+ P +P G + + AF+
Sbjct: 281 YSGAAATQPTTSQTSSVQPLD-QTNLHPLTATAV-------PGSPVAGGVNLAINQAFNF 332
Query: 303 NGPPENFSNEYDVMKPPV-----------NANTTLGSG-VYMLGLNTTVDVILQNANAIR 350
NG +F + + P V +A L SG VY L + +++ +A
Sbjct: 333 NG-TNHFVDGASFVPPTVPVLSQIVSGAQSAADLLASGLVYSLPSDANIEISFPATSAAA 391
Query: 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVAD 410
HP+HLHGH F V+ R G T A +RF +
Sbjct: 392 ---GGPHPFHLHGHAFAVV-RSAGSTTYNYNDPIFRDTVSTGTPAA---NDNVTIRFKTN 444
Query: 411 NPGAWAFHCHIEPHFHIGMGVVLALGVETVGN 442
NPG W HCHI+ H G VV A + V +
Sbjct: 445 NPGPWFLHCHIDFHLEAGFAVVFAQDIPDVAS 476
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 159/444 (35%), Gaps = 94/444 (21%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + D + ++ L+DW+H +
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGP- 160
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
R+ G LING+G+ A S ++ V K
Sbjct: 161 -------RFPGGADATLINGKGRAPSDSVAELS------------------VIKVTKGKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + H + ++E D QP EVD + I++ + YS +L NQ
Sbjct: 196 YRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD 255
Query: 186 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 245
NYWI A P + + ++ I
Sbjct: 256 -NYWIRA---------------------------------NPNFGNVGFDGGINSAILRY 281
Query: 246 MGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 303
G+P +P TN + T + N ++ VS +P +P G + + AF+ N
Sbjct: 282 DGAPAVEPTTN---QTTSVKPLNEVDLHPL-----VSTPVPGSPSSGGVDKAINMAFNFN 333
Query: 304 GPPENFSNEYDVMKPPV------------NANTTLGSG-VYMLGLNTTVDVILQNANAIR 350
G NF PP A L SG VY+L N ++++ A
Sbjct: 334 G--SNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAP 391
Query: 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVAD 410
+HLHGH F V+ D A +RF +
Sbjct: 392 GAPHP---FHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GDNVTIRFDTN 444
Query: 411 NPGAWAFHCHIEPHFHIGMGVVLA 434
NPG W HCHI+ H G VV+A
Sbjct: 445 NPGPWFLHCHIDFHLEGGFAVVMA 468
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 158/444 (35%), Gaps = 94/444 (21%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + D + ++ L+DW+H +
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGP- 160
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
R+ G LING+G+ A S ++ V K
Sbjct: 161 -------RFPGGADATLINGKGRAPSDSVAELS------------------VIKVTKGKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + H + ++E D QP EVD + I++ + YS +L NQ
Sbjct: 196 YRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD 255
Query: 186 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 245
NYWI A P + + ++ I
Sbjct: 256 -NYWIRA---------------------------------NPNFGNVGFDGGINSAILRY 281
Query: 246 MGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 303
G+P +P TN + T + N ++ VS +P P G + + AF+ N
Sbjct: 282 DGAPAVEPTTN---QTTSVKPLNEVDLHPL-----VSTPVPGAPSSGGVDKAINMAFNFN 333
Query: 304 GPPENFSNEYDVMKPPV------------NANTTLGSG-VYMLGLNTTVDVILQNANAIR 350
G NF PP A L SG VY+L N ++++ A
Sbjct: 334 G--SNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAP 391
Query: 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVAD 410
+HLHGH F V+ D A +RF +
Sbjct: 392 GAPHP---FHLHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GDNVTIRFDTN 444
Query: 411 NPGAWAFHCHIEPHFHIGMGVVLA 434
NPG W HCHI+ H G VV+A
Sbjct: 445 NPGPWFLHCHIDFHLEGGFAVVMA 468
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 157/464 (33%), Gaps = 118/464 (25%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + + D + ++ L DW+H V
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPAADLYDVDNDDTVITLVDWYH-------V 154
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
P +G TL ING+G+ + A S ++ V P K
Sbjct: 155 AAKLGPAFPLGADATL-INGKGRSPSTTTADLS------------------VISVTPGKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
YR R+ + H M ++E D P VD + I++ + YS +L NQ
Sbjct: 196 YRFRLVSLSCDPNYTFSIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVD 255
Query: 186 YNYWISA---------------------GVRGRKPATPPA-----LTLLNYHPTSASKIP 219
NYWI A G +P T L +N HP A+ +P
Sbjct: 256 -NYWIRANPNFGNVGFTGGINSAILRYDGAAAVEPTTTQTTSTAPLNEVNLHPLVATAVP 314
Query: 220 LSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNV 279
SP + G +N NG T + IN
Sbjct: 315 GSP----------------------VAGGVD---------LAINMAFNFNG-TNFFINGA 342
Query: 280 SLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTT 338
S T P P L I G + NA L SG VY L N
Sbjct: 343 SFTPPTVPVLLQIISGAQ-----------------------NAQDLLPSGSVYSLPSNAD 379
Query: 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIF 398
+++ A +HLHGH F V+ D A
Sbjct: 380 IEISFPATAAAPGAPHP---FHLHGHAFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA--- 433
Query: 399 PYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN 442
+RF DNPG W HCHI+ H G VV A + V +
Sbjct: 434 -GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVFAEDIPDVAS 476
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 163/451 (36%), Gaps = 96/451 (21%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGEFNLL-LSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + D + ++ L+DW+H +
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGP- 160
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
R+ LING+G+ +A S ++ V K
Sbjct: 161 -------RFPAGADATLINGKGRAPSDTSAELS------------------VIKVTKGKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
R R+ + H + ++E D + QP VD + I++ + YS +L NQ
Sbjct: 196 XRFRLVSLSCDPNFTFSIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVD 255
Query: 186 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 245
NYWI A P + + + ++ I
Sbjct: 256 -NYWIRA---------------------------------NPNFGNVGFNGGINSAILRY 281
Query: 246 MGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 303
G+P +P TN + T + N +N VS +P +P G + + AF+ N
Sbjct: 282 DGAPAVEPTTN---QTTSVKPLNEVNLHPL-----VSTPVPGSPSSGGVDKAINMAFNFN 333
Query: 304 GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIH------ 357
G F N + P V + SG T D++ + + P+ + I
Sbjct: 334 G-SNFFINGASFVPPSVPVLLQILSGA-----QTAQDLLPSGSVXVLPSNASIEISFPAT 387
Query: 358 --------PWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVA 409
P+HLHGH F V+ R G A +RF+
Sbjct: 388 AAAPGAPHPFHLHGHTFAVV-RSAGSTVYNYSNPIFRDVVSTGTPAA---GDNVTIRFLT 443
Query: 410 DNPGAWAFHCHIEPHFHIGMGVVLALGVETV 440
+NPG W HCHI+ H G VV A V V
Sbjct: 444 NNPGPWFLHCHIDFHLEGGFAVVQAEDVPDV 474
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 160/450 (35%), Gaps = 94/450 (20%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIV-DVADGEKEPFHYDGE-FNLLLSDWWHRSVHEQEV 65
QAGT++YH HL Q GL G +V D D + D + + L+DW+H + ++
Sbjct: 102 QAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTTITLADWYHTAA---KL 158
Query: 66 GLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKT 125
G P G TL ING+G+ +A S ++ V K
Sbjct: 159 G----PAFPNGADSTL-INGKGRAPSDSSAQLS------------------VVSVTKGKR 195
Query: 126 YRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPS 185
R R+ + H ++E D QP D + I++ + YS L NQ
Sbjct: 196 XRFRLVSLSCDPNFTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVD 255
Query: 186 YNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFAL 245
NYWI A P + + + ++ I
Sbjct: 256 -NYWIRA---------------------------------NPNFGNVGFNGGINSAILRY 281
Query: 246 MGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQN 303
G+P +P TN LN N ++ VS +P +P G + + AF+ N
Sbjct: 282 DGAPAVEPTTNQSTSTQPLNETN-LHPL-------VSTPVPGSPAAGGVDKAINMAFNFN 333
Query: 304 GPPENFSNEYDVMKPPV------------NANTTLGSG-VYMLGLNTTVDVILQNANAIR 350
G NF PP A L SG V L N ++++ A
Sbjct: 334 G--SNFFINGASFTPPSVPVLLQILSGAQTAQDLLPSGSVXTLPSNASIEISFPATAAAP 391
Query: 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVAD 410
HP+HLHGH F V+ R G A +RF+ +
Sbjct: 392 ---GAPHPFHLHGHVFAVV-RSAGSTVYNYSNPIFRDVVSTGTPAA---GDNVTIRFLTN 444
Query: 411 NPGAWAFHCHIEPHFHIGMGVVLALGVETV 440
NPG W HCHI+ H G VV A V V
Sbjct: 445 NPGPWFLHCHIDFHLEGGFAVVQAEDVPDV 474
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 169/459 (36%), Gaps = 109/459 (23%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLL-LSDWWHRSVHE--QE 64
Q GT +YH H Q G+ G++ ++ YD + + ++D+++R+ +
Sbjct: 131 QYGTSWYHSHFSAQYGNGVVGTIQIN----GPASLPYDIDLGVFPITDYYYRAADDLVHF 186
Query: 65 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 124
++ P +LING + ++N + + P K
Sbjct: 187 TQNNAPPFS-----DNVLINGTAVNPNTGEGQYAN------------------VTLTPGK 223
Query: 125 TYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP 184
+RLRI + NH M V+ AD V VD + + G+ Y V++ ++ P
Sbjct: 224 RHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAP 283
Query: 185 SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFA 244
NYW + G+ LN HP + IF
Sbjct: 284 D-NYWFNVTFGGQAACG----GSLNPHPAA---------------------------IFH 311
Query: 245 LMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTLPPTPY 288
G+P PP + H+ L L+ + + N F K N V+L L TP
Sbjct: 312 YAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL 370
Query: 289 LGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVILQNAN 347
+ NG N D KP ++ T G+ Y + N VD + Q
Sbjct: 371 F---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAVDQWTY 416
Query: 348 AIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXXXXXXX 392
+ N S HP HLHGHDF VLGR + +F + D
Sbjct: 417 WLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRR 476
Query: 393 XTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 431
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 477 DTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 169/459 (36%), Gaps = 109/459 (23%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLL-LSDWWHRSVHE--QE 64
Q GT +YH H Q G+ G++ ++ YD + + ++D+++R+ +
Sbjct: 131 QYGTSWYHSHFSAQYGNGVVGTIQIN----GPASLPYDIDLGVFPITDYYYRAADDLVHF 186
Query: 65 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 124
++ P +LING + ++N + + P K
Sbjct: 187 TQNNAPPFS-----DNVLINGTAVNPNTGEGQYAN------------------VTLTPGK 223
Query: 125 TYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP 184
+RLRI + NH M V+ AD V VD + + G+ Y V++ ++ P
Sbjct: 224 RHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAP 283
Query: 185 SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFA 244
NYW + G+ LN HP + IF
Sbjct: 284 D-NYWFNVTFGGQAACG----GSLNPHPAA---------------------------IFH 311
Query: 245 LMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTLPPTPY 288
G+P PP + H+ L L+ + + N F K N V+L L TP
Sbjct: 312 YAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL 370
Query: 289 LGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVILQNAN 347
+ NG N D KP ++ T G+ Y + N VD + Q
Sbjct: 371 F---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAVDQWTY 416
Query: 348 AIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXXXXXXX 392
+ N S HP HLHGHDF VLGR + +F + D
Sbjct: 417 WLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRR 476
Query: 393 XTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 431
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 477 DTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 169/459 (36%), Gaps = 109/459 (23%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLL-LSDWWHRSVHE--QE 64
Q GT +YH H Q G+ G++ ++ YD + + ++D+++R+ +
Sbjct: 131 QYGTSWYHSHFSAQYGNGVVGTIQIN----GPASLPYDIDLGVFPITDYYYRAADDLVHF 186
Query: 65 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 124
++ P +LING + ++N + + P K
Sbjct: 187 TQNNAPPFS-----DNVLINGTAVNPNTGEGQYAN------------------VTLTPGK 223
Query: 125 TYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP 184
+RLRI + NH M V+ AD V VD + + G+ Y V++ ++ P
Sbjct: 224 RHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVIDASRAP 283
Query: 185 SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFA 244
NYW + G+ LN HP + IF
Sbjct: 284 D-NYWFNVTFGGQAACG----GSLNPHPAA---------------------------IFH 311
Query: 245 LMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTLPPTPY 288
G+P PP + H+ L L+ + + N F K N V+L L TP
Sbjct: 312 YAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDLTGTPL 370
Query: 289 LGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVILQNAN 347
+ NG N D KP ++ T G+ Y + N VD + Q
Sbjct: 371 F---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAVDQWTY 416
Query: 348 AIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXXXXXXX 392
+ N S HP HLHGHDF VLGR + +F + D
Sbjct: 417 WLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRR 476
Query: 393 XTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 431
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 477 DTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 160/443 (36%), Gaps = 77/443 (17%)
Query: 8 QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVG 66
Q GT +YH H Q G+ G++ +D P+ D G F L+ D+++RS E
Sbjct: 172 QYGTSWYHSHFSAQYGNGVVGTIQID--GPASLPYDIDLGVFPLM--DYYYRSADELVHF 227
Query: 67 LSSRPLRWIGEP--QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 124
S G P +L NG + + A + N + + P K
Sbjct: 228 TQSN-----GAPPSDNVLFNGTARHPETGAGQWYN------------------VTLTPGK 264
Query: 125 TYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP 184
+RLRI + H M V+ D V F V + + G+ Y V + N P
Sbjct: 265 RHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTIDANS-P 323
Query: 185 SYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSN 240
NYW + G+ G PA + Y A+ +P P +H +
Sbjct: 324 VGNYWFNVTFGDGLCGSSNNKFPA-AIFRYQGAPAT-LPTDQGLPVP-----NHMCLDNL 376
Query: 241 KIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAF 300
+ ++ P NF +R NT+ V+L + TP +
Sbjct: 377 NLTPVVTRSAPVNNFVKR-----PSNTLG---------VTLDIGGTPLF---------VW 413
Query: 301 DQNGPPENFSNEYDVMKPPVNANTT--LGSGVYMLGLNTTVDVILQNANAIRPNLSEIHP 358
NG N ++ ++ NT+ + + + L + P +S HP
Sbjct: 414 KVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIVSLPHP 473
Query: 359 WHLHGHDFWVLGRGEGK---------FTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFV 408
HLHGHDF VLGR + F + + P G W L F
Sbjct: 474 MHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLAFK 533
Query: 409 ADNPGAWAFHCHIEPHFHIGMGV 431
DNPGAW FHCHI H G+ V
Sbjct: 534 TDNPGAWLFHCHIAWHVSGGLSV 556
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 31/191 (16%)
Query: 7 VQAGTYFYHGHLGMQRSAGLYGSLIVD---VADGEKEPFHYDGEFNLL-LSDWWHRSVHE 62
Q GT +YH H +Q GL+G LI++ AD YD + ++ L DW H SV
Sbjct: 160 TQYGTTWYHSHFSLQYGDGLFGPLIINGPATAD-------YDEDVGVIFLQDWAHESVF- 211
Query: 63 QEVGLSSRPLRWIGEPQTL---LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119
E+ ++R +G P L L+NG F+CS S + + G ++ ++
Sbjct: 212 -EIWDTAR----LGAPPALENTLMNGTNTFDCS-------ASTDPNCVGGGKKF--ELTF 257
Query: 120 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 179
V+ K YRLR+ + NH + V+ D + P+ D + I G+ Y V++
Sbjct: 258 VEGTK-YRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVE 316
Query: 180 TNQDPSYNYWI 190
N + NYWI
Sbjct: 317 ANA-AADNYWI 326
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP-YGWTALRFVADNPGAW 415
HP HLHGHDF+++ + F ++ P G+ A+ F DNPG+W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 416 AFHCHIEPHFHIGMGV 431
HCHI H GM +
Sbjct: 523 LLHCHIAWHASEGMAM 538
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 31/191 (16%)
Query: 7 VQAGTYFYHGHLGMQRSAGLYGSLIVD---VADGEKEPFHYDGEFNLL-LSDWWHRSVHE 62
Q GT +YH H +Q GL+G LI++ AD YD + ++ L DW H SV
Sbjct: 160 TQYGTTWYHSHFSLQYGDGLFGPLIINGPATAD-------YDEDVGVIFLQDWAHESVF- 211
Query: 63 QEVGLSSRPLRWIGEPQTL---LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILH 119
E+ ++R +G P L L+NG F+CS S + + G ++ ++
Sbjct: 212 -EIWDTAR----LGAPPALENTLMNGTNTFDCS-------ASTDPNCVGGGKKF--ELTF 257
Query: 120 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 179
V+ K YRLR+ + NH + V+ D + P+ D + I G+ Y V++
Sbjct: 258 VEGTK-YRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVE 316
Query: 180 TNQDPSYNYWI 190
N + NYWI
Sbjct: 317 ANA-AADNYWI 326
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP-YGWTALRFVADNPGAW 415
HP HLHGHDF+++ + F ++ P G+ A+ F DNPG+W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 416 AFHCHIEPHFHIGMGV 431
HCHI H G+ +
Sbjct: 523 LLHCHIAWHASEGLAM 538
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 411
N ++H H HGH F RG IFP + L
Sbjct: 970 NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRT 1013
Query: 412 PGAWAFHCHIEPHFHIGM 429
PG W HCH+ H H GM
Sbjct: 1014 PGIWLLHCHVTDHIHAGM 1031
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 411
N ++H H HGH F RG IFP + L
Sbjct: 989 NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRT 1032
Query: 412 PGAWAFHCHIEPHFHIGM 429
PG W HCH+ H H GM
Sbjct: 1033 PGIWLLHCHVTDHIHAGM 1050
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 35/180 (19%)
Query: 9 AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE 64
AGT++YH HL Q AGL G+L+V+ + E L+L D +
Sbjct: 106 AGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGRPA- 164
Query: 65 VGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNK 124
P+ W+ + L+ G +L A
Sbjct: 165 ---PHTPMDWMNGKEGDLVLVNGALRPTLVAQ--------------------------KA 195
Query: 125 TYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQD 183
T RLR+ +++H + ++ ADG ++ +P EV ++ + GE VL+ ++
Sbjct: 196 TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLRKE 255
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 357 HPWHLHGHDFWVLG-RGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 415
HP+H+HG F ++ + GK K + T + P LR D G
Sbjct: 407 HPFHIHGTQFELISSKLNGKVQKAE-------FRALRDTINVRPNEELRLRMKQDFKGLR 459
Query: 416 AFHCHIEPHFHIGM 429
+HCHI H +GM
Sbjct: 460 MYHCHILEHEDLGM 473
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 416
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 193 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 247
Query: 417 FHCHIEPHFHIGMGVVLALGVETVGNIP 444
+HCH++ H +GM V L L + G IP
Sbjct: 248 YHCHVQSHSDMGM-VGLFLVKKPDGTIP 274
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 416
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 194 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 248
Query: 417 FHCHIEPHFHIGMGVVLALGVETVGNIP 444
+HCH++ H +GM V L L + G IP
Sbjct: 249 YHCHVQSHSDMGM-VGLFLVKKPDGTIP 275
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 416
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 231 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 285
Query: 417 FHCHIEPHFHIGMGVVLALGVETVGNIPN 445
+HCH++ H +GM V L L + G IP
Sbjct: 286 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 313
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 416
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 190 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 244
Query: 417 FHCHIEPHFHIGMGVVLALGVETVGNIP 444
+HCH++ H +GM V L L + G IP
Sbjct: 245 YHCHVQSHSDMGM-VGLFLVKKPDGTIP 271
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPG 413
S H +HLHGH W+ R + ++ D + +G+ + PG
Sbjct: 209 SNFHTFHLHGHR-WLDNRTGMRTSEYDPSPLIDIKDLNPGVS----FGFQVIAGEGVGPG 263
Query: 414 AWAFHCHIEPHFHIGM 429
W +HCH++ H +GM
Sbjct: 264 MWMYHCHVQNHSDMGM 279
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 357 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 416
H +HLHGH W R G T D+ +G+ + GAW
Sbjct: 196 HTFHLHGHR-WADNR-TGMLTGPDDPSQVIDNKI---CGPADSFGFQVIAGEGVGAGAWM 250
Query: 417 FHCHIEPHFHIGMGVVLALGVETVGNIPN 445
+HCH++ H +GM V L L + G IP
Sbjct: 251 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 278
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 285 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 331
P Y I G D+ +Q P + E DVM P V+ +TL G Y
Sbjct: 159 PAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKY 205
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 285 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 331
P Y I G D+ +Q P + E DVM P V+ +TL G Y
Sbjct: 159 PAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKY 205
>pdb|2BP0|A Chain A, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 8 QAGTYFYH----GHLGMQRSAGLYGSLIVDVADG----EKEPFHYD-----GEFNLLL 52
++GT+ YH G + +GL G+L+V DG E +P HYD GEF+L +
Sbjct: 122 RSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKPLHYDRAYTIGEFDLYI 179
>pdb|2BP0|B Chain B, M168l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans
Length = 336
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 8 QAGTYFYH----GHLGMQRSAGLYGSLIVDVADG----EKEPFHYD-----GEFNLLL 52
++GT+ YH G + +GL G+L+V DG E +P HYD GEF+L +
Sbjct: 122 RSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPEGKPLHYDRAYTIGEFDLYI 179
>pdb|1WSA|A Chain A, Structure Of L-Asparaginase Ii Precursor
pdb|1WSA|B Chain B, Structure Of L-Asparaginase Ii Precursor
Length = 330
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 257 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 316
R T LNT +N F P T +G++ YG + F Q+ P ++E+D+
Sbjct: 162 REATKLNT-TAVNAFAS----------PNTGKIGTVYYGKVEYFTQSVRPHTLASEFDIS 210
Query: 317 K 317
K
Sbjct: 211 K 211
>pdb|2JFC|A Chain A, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|B Chain B, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|C Chain C, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|D Chain D, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|E Chain E, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
pdb|2JFC|F Chain F, M144l Mutant Of Nitrite Reductase From Alcaligenes
Xylosoxidans In Space Group P212121
Length = 335
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 8 QAGTYFYH----GHLGMQRSAGLYGSLIVDVADGEKE----PFHYD-----GEFNLLL 52
++GT+ YH G + +GL G+L+V DG K+ P HYD GEF+L +
Sbjct: 121 RSGTFVYHCAPEGMVPWHVVSGLSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYI 178
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 394 TAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436
T +FP+ + +NPG W CH + GM +L +
Sbjct: 667 TLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVS 709
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 394 TAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436
T +FP+ + +NPG W CH + GM +L +
Sbjct: 668 TLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVS 710
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 285 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 331
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSSNQRASFSSVGSELDVMAPGVSIQSTLPGGTY 214
>pdb|1KBW|A Chain A, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|B Chain B, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|C Chain C, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|D Chain D, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|E Chain E, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBW|F Chain F, Crystal Structure Of The Soluble Domain Of Ania From
Neisseria Gonorrhoeae
pdb|1KBV|A Chain A, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|B Chain B, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|C Chain C, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|D Chain D, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|E Chain E, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
pdb|1KBV|F Chain F, Nitrite-Soaked Crystal Structure Of The Soluble Domain Of
Ania From Neisseria Gonorrhoeae
Length = 327
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 7 VQAGTYFYH---GHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHR 58
+Q G Y YH +GM + G+YG ++V+ +G + D EF ++ D++ +
Sbjct: 126 LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPK---VDKEFYIVQGDFYTK 177
>pdb|3UKH|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
Length = 519
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 461
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 462 QN 463
QN
Sbjct: 490 QN 491
>pdb|3UKK|A Chain A, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|B Chain B, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|C Chain C, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|D Chain D, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 517
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 461
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 462 QN 463
QN
Sbjct: 490 QN 491
>pdb|3UKQ|A Chain A, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|B Chain B, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|C Chain C, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|D Chain D, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 510
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 461
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 462 QN 463
QN
Sbjct: 490 QN 491
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 285 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 331
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSANQRASFSSAGSELDVMAPGVSIQSTLPGGTY 214
>pdb|3UKP|A Chain A, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|B Chain B, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|C Chain C, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|D Chain D, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|E Chain E, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|F Chain F, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|G Chain G, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|H Chain H, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 509
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 461
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 462 QN 463
QN
Sbjct: 490 QN 491
>pdb|3UTE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTG|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTH|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|4GDC|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDD|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDE|A Chain A, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|B Chain B, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|C Chain C, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|D Chain D, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
Length = 513
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 461
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 446 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 493
Query: 462 QN 463
QN
Sbjct: 494 QN 495
>pdb|3UKL|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
Length = 510
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 461
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 462 QN 463
QN
Sbjct: 490 QN 491
>pdb|4G1G|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1G|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1L|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1L|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1O|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1O|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
Length = 364
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 314 DVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSE 355
DV K P A GS +Y L LN T+DV + + + +LS+
Sbjct: 185 DVYKIPTAALKVSGSSLYNLALNVTIDVEVDPKSPLVKSLSK 226
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 285 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 331
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSSNQRASFSSAGSELDVMAPGVSIQSTLPGGTY 214
>pdb|1ZO2|A Chain A, Structure Of Nuclear Transport Factor 2 (Ntf2) From
Cryptosporidium Parvum
pdb|1ZO2|B Chain B, Structure Of Nuclear Transport Factor 2 (Ntf2) From
Cryptosporidium Parvum
Length = 129
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 253 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 312
T F + ++N N++N F + + P+P GSI + D +G P FS
Sbjct: 48 TQFQGQANIVNKFNSLN-FQRVQFEITRVDCQPSPNNGSIVFVTGDVRIDDGQPLKFSQV 106
Query: 313 YDVMKPPVNANTTLGSGVYMLGL 335
+++M P N + + ++ L L
Sbjct: 107 FNLM-PSGNGGFMIFNDLFRLNL 128
>pdb|3NVS|A Chain A, 1.02 Angstrom Resolution Crystal Structure Of
3-Phosphoshikimate 1- Carboxyvinyltransferase From
Vibrio Cholerae In Complex With Shikimate-3-Phosphate
(Partially Photolyzed) And Glyphosate
Length = 450
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 208 LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT 267
L + + + L P + + SKS SN+ L T L + ++
Sbjct: 18 LYFQSNAMESLTLQPIELISGEVNLPGSKSVSNRALLLAALASGTTRLTNLLDSDDIRHM 77
Query: 268 INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLG 327
+N TK +N L ++ GL AF P E F P+ A LG
Sbjct: 78 LNALTKLGVN---YRLSADKTTCEVE-GLGQAFHTTQPLELFLGNAGTAMRPLAAALCLG 133
Query: 328 SGVYML 333
G Y+L
Sbjct: 134 QGDYVL 139
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,393,715
Number of Sequences: 62578
Number of extensions: 670417
Number of successful extensions: 1558
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1410
Number of HSP's gapped (non-prelim): 104
length of query: 463
length of database: 14,973,337
effective HSP length: 102
effective length of query: 361
effective length of database: 8,590,381
effective search space: 3101127541
effective search space used: 3101127541
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)