Query 012467
Match_columns 463
No_of_seqs 214 out of 1384
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:00:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012467.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012467hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 2.4E-88 8.2E-93 712.1 47.9 461 2-463 91-551 (552)
2 3sqr_A Laccase; multicopper ox 100.0 7.3E-80 2.5E-84 643.0 39.3 400 2-458 155-569 (580)
3 1zpu_A Iron transport multicop 100.0 2.1E-76 7.2E-81 617.1 40.3 389 2-455 91-505 (534)
4 3pxl_A Laccase; 4-copper prote 100.0 1.6E-75 5.6E-80 603.4 38.1 380 2-455 95-493 (499)
5 3t6v_A Laccase; beta barrel, o 100.0 3.8E-75 1.3E-79 600.7 39.0 382 2-454 96-492 (495)
6 2q9o_A Laccase-1; multicopper 100.0 1E-74 3.5E-79 608.0 37.9 393 2-458 125-548 (559)
7 1v10_A Laccase; multicopper bl 100.0 4E-74 1.4E-78 599.2 36.6 389 2-461 116-519 (521)
8 1hfu_A Laccase 1; oxidoreducta 100.0 2E-73 6.8E-78 592.0 37.0 379 2-456 95-493 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 5.4E-67 1.9E-71 535.5 30.6 319 2-436 97-439 (439)
10 3aw5_A Multicopper oxidase; be 100.0 2.4E-65 8.3E-70 523.2 28.9 321 2-435 89-447 (448)
11 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.6E-65 8.9E-70 523.8 26.7 322 1-441 100-445 (451)
12 3abg_A Bilirubin oxidase; clea 100.0 3.2E-64 1.1E-68 524.3 33.1 333 2-437 120-475 (534)
13 2wsd_A Spore coat protein A; o 100.0 2.6E-63 9.1E-68 517.2 31.0 340 2-438 139-511 (513)
14 3gyr_A PHS, phenoxazinone synt 100.0 1.7E-61 5.8E-66 516.9 33.2 374 2-439 157-593 (612)
15 2g23_A PHS, phenoxazinone synt 100.0 9.3E-61 3.2E-65 501.9 36.5 368 2-449 157-603 (612)
16 3zx1_A Oxidoreductase, putativ 100.0 1.3E-60 4.4E-65 489.3 29.0 322 2-436 133-480 (481)
17 3od3_A Blue copper oxidase CUE 100.0 1.8E-59 6.2E-64 480.5 28.2 329 2-435 99-488 (488)
18 2dv6_A Nitrite reductase; elec 100.0 2.8E-38 9.7E-43 324.7 22.0 322 2-436 100-432 (447)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 2.8E-36 9.6E-41 337.0 16.1 325 2-438 685-1059(1065)
20 2r7e_A Coagulation factor VIII 100.0 2.3E-36 7.7E-41 325.1 12.5 150 8-193 153-312 (742)
21 2j5w_A Ceruloplasmin, ferroxid 100.0 8E-33 2.8E-37 309.2 17.7 357 2-434 157-558 (1065)
22 1kbv_A ANIA, major outer membr 100.0 1.3E-32 4.5E-37 270.2 11.2 181 2-213 121-308 (327)
23 3g5w_A Multicopper oxidase typ 100.0 8.9E-30 3E-34 248.7 19.1 180 2-213 90-277 (318)
24 2zwn_A Two-domain type laccase 100.0 2E-28 6.9E-33 241.7 22.0 180 2-213 91-278 (339)
25 2zwn_A Two-domain type laccase 100.0 6.7E-29 2.3E-33 245.1 16.1 217 116-434 35-274 (339)
26 2zoo_A Probable nitrite reduct 100.0 1.8E-29 6E-34 258.7 11.9 184 2-214 111-299 (442)
27 3cg8_A Laccase; oxidoreductase 100.0 1.4E-28 4.8E-33 242.6 16.1 223 115-450 76-318 (343)
28 3gdc_A Multicopper oxidase; be 100.0 4.7E-28 1.6E-32 233.6 14.0 217 116-435 66-286 (288)
29 1oe1_A Dissimilatory copper-co 100.0 8.1E-28 2.8E-32 237.5 15.3 183 2-213 116-319 (336)
30 3g5w_A Multicopper oxidase typ 99.9 1E-27 3.6E-32 234.1 11.9 219 116-434 34-273 (318)
31 3t9w_A Small laccase, multi-co 99.9 3.7E-27 1.3E-31 228.2 13.9 216 113-438 55-288 (299)
32 1mzy_A Copper-containing nitri 99.9 1.7E-26 5.8E-31 227.7 18.3 182 2-212 115-318 (333)
33 3kw8_A Laccase, putative coppe 99.9 6.7E-27 2.3E-31 224.2 13.7 215 114-438 34-266 (276)
34 2bw4_A Copper-containing nitri 99.9 9.7E-27 3.3E-31 230.2 12.4 184 2-213 122-325 (340)
35 3tas_A Small laccase, multi-co 99.9 9.8E-26 3.4E-30 219.9 19.3 216 112-437 38-271 (313)
36 3gdc_A Multicopper oxidase; be 99.9 8.1E-25 2.8E-29 211.0 16.1 147 2-192 119-270 (288)
37 2dv6_A Nitrite reductase; elec 99.9 2.9E-24 1E-28 220.3 19.1 183 2-213 246-434 (447)
38 1sdd_B Coagulation factor V; c 99.9 4.2E-23 1.4E-27 220.8 15.1 159 2-194 131-311 (647)
39 1sdd_A Coagulation factor V; c 99.9 8.1E-25 2.8E-29 212.8 1.1 228 115-437 59-300 (306)
40 1sdd_B Coagulation factor V; c 99.9 1.5E-22 5E-27 216.6 17.0 246 113-436 66-326 (647)
41 3tas_A Small laccase, multi-co 99.9 8.1E-23 2.8E-27 199.2 13.4 149 6-211 112-270 (313)
42 1sdd_A Coagulation factor V; c 99.9 5.8E-24 2E-28 206.8 2.3 140 9-194 139-284 (306)
43 3t9w_A Small laccase, multi-co 99.9 1.6E-21 5.5E-26 188.6 13.5 147 8-211 130-286 (299)
44 3kw8_A Laccase, putative coppe 99.9 2.1E-21 7.2E-26 185.9 13.6 145 9-211 109-264 (276)
45 1kbv_A ANIA, major outer membr 99.9 8.3E-21 2.8E-25 186.2 16.8 233 116-435 70-305 (327)
46 2r7e_B Coagulation factor VIII 99.8 3.7E-22 1.3E-26 215.1 5.2 85 331-435 370-454 (770)
47 2bw4_A Copper-containing nitri 99.8 3E-20 1E-24 183.5 17.6 88 331-436 233-323 (340)
48 2r7e_B Coagulation factor VIII 99.8 1.9E-21 6.3E-26 209.6 7.0 158 2-193 253-439 (770)
49 3cg8_A Laccase; oxidoreductase 99.8 1.1E-19 3.9E-24 178.9 14.1 147 8-212 149-306 (343)
50 1mzy_A Copper-containing nitri 99.8 7.2E-19 2.5E-23 173.1 19.4 89 331-436 227-317 (333)
51 2r7e_A Coagulation factor VIII 99.8 5.2E-20 1.8E-24 198.1 1.2 156 2-195 512-696 (742)
52 2zoo_A Probable nitrite reduct 99.7 2.6E-17 8.8E-22 168.3 17.0 233 116-435 60-295 (442)
53 1oe1_A Dissimilatory copper-co 99.7 8.2E-17 2.8E-21 158.6 19.5 89 330-436 226-317 (336)
54 2xu9_A Laccase; oxidoreductase 99.3 1.5E-11 5E-16 125.3 11.3 218 116-423 47-266 (439)
55 3cvb_A Plastocyanin; cupredoxi 99.2 7.5E-11 2.6E-15 95.3 8.0 84 330-436 20-104 (105)
56 2aan_A Auracyanin A; cupredoxi 99.1 9.1E-11 3.1E-15 100.0 6.6 94 330-435 36-138 (139)
57 1aoz_A Ascorbate oxidase; oxid 99.0 2.8E-09 9.5E-14 111.6 16.5 230 116-423 34-284 (552)
58 2uxt_A Protein SUFI, SUFI; oxi 99.0 1.9E-09 6.4E-14 110.0 12.4 219 116-423 50-272 (451)
59 3pxl_A Laccase; 4-copper prote 99.0 9.8E-09 3.4E-13 105.6 15.7 224 116-421 34-263 (499)
60 3t6v_A Laccase; beta barrel, o 98.9 1.1E-08 3.6E-13 105.4 15.3 226 116-421 35-266 (495)
61 1hfu_A Laccase 1; oxidoreducta 98.9 7.5E-09 2.6E-13 107.0 13.5 224 116-422 34-263 (503)
62 1v10_A Laccase; multicopper bl 98.9 1.4E-08 4.7E-13 105.4 15.1 230 116-422 55-290 (521)
63 3sqr_A Laccase; multicopper ox 98.9 2.1E-08 7.1E-13 104.7 16.3 215 116-421 98-330 (580)
64 2q9o_A Laccase-1; multicopper 98.9 2.4E-08 8.2E-13 104.5 16.5 207 116-421 67-292 (559)
65 2gim_A Plastocyanin; beta shee 98.9 4.8E-09 1.6E-13 84.7 7.8 84 330-436 21-105 (106)
66 1qhq_A Protein (auracyanin); e 98.8 1.4E-08 4.7E-13 86.5 7.7 95 331-436 35-139 (140)
67 1zpu_A Iron transport multicop 98.8 8E-08 2.8E-12 99.9 14.8 218 116-421 34-256 (534)
68 3zx1_A Oxidoreductase, putativ 98.6 3.4E-07 1.2E-11 93.6 14.8 197 116-421 82-297 (481)
69 1pcs_A Plastocyanin; electron 98.6 2.7E-08 9.1E-13 79.1 5.2 78 330-435 20-97 (98)
70 2plt_A Plastocyanin; electron 98.6 1.1E-07 3.9E-12 75.3 7.8 79 330-435 19-97 (98)
71 1bxv_A Plastocyanin; copper pr 98.5 2.7E-07 9.1E-12 72.0 7.7 71 330-435 20-90 (91)
72 3aw5_A Multicopper oxidase; be 98.5 2.5E-07 8.6E-12 94.1 8.5 198 116-420 38-259 (448)
73 1b3i_A PETE protein, protein ( 98.5 7.5E-08 2.5E-12 76.3 3.2 77 330-435 20-96 (97)
74 1byp_A Protein (plastocyanin); 98.4 6.5E-07 2.2E-11 71.0 7.2 81 330-435 18-98 (99)
75 4hci_A Cupredoxin 1; structura 98.4 1.4E-06 4.8E-11 69.3 8.5 71 330-435 29-99 (100)
76 1iby_A Nitrosocyanin; RED copp 98.3 1.5E-06 5E-11 70.7 8.5 72 330-435 39-110 (112)
77 3abg_A Bilirubin oxidase; clea 98.3 6.3E-06 2.2E-10 85.5 13.0 70 116-195 69-138 (534)
78 1kdj_A Plastocyanin; electron 98.3 1.4E-06 4.7E-11 69.5 6.3 83 330-435 18-101 (102)
79 2wsd_A Spore coat protein A; o 98.2 3.2E-06 1.1E-10 87.5 10.2 72 330-417 242-315 (513)
80 1plc_A Plastocyanin; electron 98.0 5.6E-06 1.9E-10 65.6 5.8 81 330-435 18-98 (99)
81 2cal_A Rusticyanin; iron respi 98.0 1.5E-05 5.3E-10 68.5 8.1 82 330-435 62-153 (154)
82 3od3_A Blue copper oxidase CUE 98.0 1.7E-05 6E-10 81.0 9.9 74 117-191 393-471 (488)
83 2ov0_A Amicyanin; beta-sandwic 97.9 3.8E-05 1.3E-09 61.5 7.6 71 330-435 34-104 (105)
84 1fwx_A Nitrous oxide reductase 97.8 5.5E-05 1.9E-09 78.4 9.0 77 329-437 513-592 (595)
85 3gyr_A PHS, phenoxazinone synt 97.6 0.0007 2.4E-08 71.5 14.2 81 331-416 267-350 (612)
86 2g23_A PHS, phenoxazinone synt 97.5 0.00023 7.8E-09 74.7 9.7 75 117-193 473-574 (612)
87 1iuz_A Plastocyanin; electron 97.2 0.0013 4.5E-08 51.6 8.3 79 330-435 19-97 (98)
88 3ef4_A Pseudoazurin, blue copp 97.2 0.0006 2.1E-08 55.9 6.3 73 330-437 23-95 (124)
89 1id2_A Amicyanin; beta barrel, 97.1 0.0013 4.3E-08 52.6 7.5 71 330-435 35-105 (106)
90 2aan_A Auracyanin A; cupredoxi 97.1 0.00087 3E-08 56.3 6.8 70 114-192 33-123 (139)
91 3erx_A Pseudoazurin; copper pr 97.1 0.0011 3.8E-08 54.4 6.7 73 330-437 22-94 (123)
92 3tu6_A Pseudoazurin (blue copp 97.0 0.00094 3.2E-08 55.1 5.6 73 330-437 24-96 (127)
93 3c75_A Amicyanin; copper prote 96.9 0.0022 7.6E-08 53.3 7.5 71 330-435 61-131 (132)
94 1iby_A Nitrosocyanin; RED copp 96.6 0.0084 2.9E-07 48.1 8.3 59 115-192 37-95 (112)
95 3ay2_A Lipid modified azurin p 96.5 0.0052 1.8E-07 53.0 7.2 94 331-435 60-165 (167)
96 1bxv_A Plastocyanin; copper pr 96.4 0.002 6.8E-08 49.5 3.1 28 4-33 64-91 (91)
97 1cuo_A Protein (azurin ISO-2); 96.3 0.014 4.7E-07 48.2 8.4 94 331-435 20-127 (129)
98 1paz_A Pseudoazurin precursor; 96.3 0.0086 2.9E-07 49.0 6.8 36 398-437 59-94 (123)
99 3tu6_A Pseudoazurin (blue copp 96.2 0.0031 1.1E-07 52.0 3.8 33 2-36 66-98 (127)
100 3erx_A Pseudoazurin; copper pr 96.2 0.0028 9.6E-08 51.9 3.4 32 2-35 64-95 (123)
101 1pmy_A Pseudoazurin; electron 96.1 0.0095 3.3E-07 48.7 5.9 37 397-437 58-94 (123)
102 3ef4_A Pseudoazurin, blue copp 96.0 0.0044 1.5E-07 50.7 3.5 33 2-36 65-97 (124)
103 1nwp_A Azurin; electron transp 95.9 0.012 4.2E-07 48.4 5.9 77 114-191 16-111 (128)
104 2ccw_A Azurin II, AZN-2; elect 95.8 0.015 5.2E-07 47.9 6.1 77 114-191 16-111 (129)
105 3sbq_A Nitrous-oxide reductase 95.8 0.023 8E-07 58.0 8.5 79 329-437 558-637 (638)
106 4hci_A Cupredoxin 1; structura 95.7 0.041 1.4E-06 43.0 8.0 58 115-191 27-84 (100)
107 2iaa_C Azurin; quinoprotein, t 95.7 0.018 6.3E-07 47.3 6.2 78 114-191 15-110 (128)
108 3cvb_A Plastocyanin; cupredoxi 95.6 0.012 4E-07 46.5 4.6 73 114-192 17-89 (105)
109 2cua_A Protein (CUA); CUA cent 95.5 0.044 1.5E-06 45.5 8.0 69 331-435 62-133 (135)
110 2ccw_A Azurin II, AZN-2; elect 95.4 0.064 2.2E-06 44.1 8.5 94 331-435 20-127 (129)
111 1paz_A Pseudoazurin precursor; 95.2 0.013 4.4E-07 48.0 3.5 31 3-35 65-95 (123)
112 3ay2_A Lipid modified azurin p 95.1 0.025 8.5E-07 48.7 5.3 77 115-191 57-149 (167)
113 3fsa_A Azurin; copper, cupredo 95.1 0.023 8E-07 46.2 4.8 77 115-191 17-111 (125)
114 1qhq_A Protein (auracyanin); e 95.1 0.047 1.6E-06 45.5 6.9 69 115-193 32-123 (140)
115 1cuo_A Protein (azurin ISO-2); 95.0 0.024 8.2E-07 46.7 4.6 78 114-191 16-111 (129)
116 1pmy_A Pseudoazurin; electron 95.0 0.016 5.3E-07 47.4 3.4 31 3-35 65-95 (123)
117 2iaa_C Azurin; quinoprotein, t 94.9 0.067 2.3E-06 43.9 7.2 43 392-435 81-126 (128)
118 1nwp_A Azurin; electron transp 94.7 0.096 3.3E-06 43.0 7.7 94 331-435 20-127 (128)
119 2ux6_A Pseudoazurin; type-1 co 94.7 0.052 1.8E-06 44.2 5.8 71 330-437 22-92 (122)
120 3fsa_A Azurin; copper, cupredo 94.5 0.12 4.1E-06 42.0 7.6 91 331-435 20-124 (125)
121 3s8f_B Cytochrome C oxidase su 94.0 0.18 6.2E-06 43.3 8.0 71 331-435 95-166 (168)
122 2cal_A Rusticyanin; iron respi 93.5 0.068 2.3E-06 45.4 4.5 74 116-193 61-138 (154)
123 2gim_A Plastocyanin; beta shee 93.3 0.022 7.6E-07 44.9 1.0 71 115-191 19-89 (106)
124 2plt_A Plastocyanin; electron 92.3 0.36 1.2E-05 37.1 6.8 66 115-191 17-82 (98)
125 1pcs_A Plastocyanin; electron 91.8 0.29 1E-05 37.6 5.8 66 115-192 18-83 (98)
126 1kdj_A Plastocyanin; electron 91.4 0.17 5.8E-06 39.3 4.0 64 114-191 15-86 (102)
127 1b3i_A PETE protein, protein ( 90.8 0.53 1.8E-05 36.0 6.3 62 115-191 18-81 (97)
128 1iuz_A Plastocyanin; electron 90.0 0.9 3.1E-05 34.9 7.0 67 114-191 16-82 (98)
129 1fwx_A Nitrous oxide reductase 89.6 0.96 3.3E-05 46.8 8.7 62 114-193 511-574 (595)
130 3isy_A Bsupi, intracellular pr 89.4 5.2 0.00018 32.0 11.1 76 122-198 16-105 (120)
131 2ux6_A Pseudoazurin; type-1 co 87.9 0.25 8.6E-06 40.1 2.4 29 3-35 65-93 (122)
132 2ov0_A Amicyanin; beta-sandwic 87.1 0.97 3.3E-05 35.3 5.5 61 115-192 32-92 (105)
133 1plc_A Plastocyanin; electron 81.7 1.3 4.6E-05 33.9 4.0 67 114-191 15-83 (99)
134 1byp_A Protein (plastocyanin); 81.3 0.96 3.3E-05 34.7 3.0 63 115-191 16-83 (99)
135 2cua_A Protein (CUA); CUA cent 80.7 5 0.00017 32.9 7.3 55 117-191 61-115 (135)
136 3sbq_A Nitrous-oxide reductase 80.6 5.4 0.00018 40.9 8.8 60 114-191 556-617 (638)
137 1id2_A Amicyanin; beta barrel, 77.1 3.4 0.00012 32.1 5.0 60 115-191 33-92 (106)
138 3c75_A Amicyanin; copper prote 77.0 6.5 0.00022 31.9 6.9 60 115-191 59-118 (132)
139 3s8f_B Cytochrome C oxidase su 75.5 8.5 0.00029 32.8 7.4 55 117-191 94-148 (168)
140 1cyx_A CYOA; electron transpor 75.0 5.2 0.00018 35.3 6.0 69 331-433 43-112 (205)
141 2r39_A FIXG-related protein; s 71.4 11 0.00038 29.8 6.8 46 125-180 34-81 (118)
142 3hb3_B Cytochrome C oxidase su 66.3 13 0.00044 34.8 7.0 69 331-433 191-260 (298)
143 2gsm_B Cytochrome C oxidase su 64.0 14 0.00049 33.8 6.8 69 331-433 173-242 (262)
144 3idu_A Uncharacterized protein 60.4 64 0.0022 25.8 10.9 71 119-198 28-100 (127)
145 1v54_B Cytochrome C oxidase po 51.3 25 0.00085 31.4 6.0 69 331-433 142-211 (227)
146 1fft_B Ubiquinol oxidase; elec 43.9 24 0.00083 33.2 4.8 69 331-433 153-222 (315)
147 2wtp_A ORF131 protein, CZCE; m 42.1 11 0.00038 30.4 1.8 21 117-137 72-92 (131)
148 2x3c_A Toxic extracellular end 32.1 1.8E+02 0.006 27.6 8.9 47 147-194 67-127 (343)
149 1x9l_A CUI-DR1885; copper bind 27.9 2.2E+02 0.0076 23.3 7.7 55 117-176 48-102 (149)
150 1x9u_A Umecyanin; cupredoxin, 26.5 47 0.0016 26.2 3.2 40 2-41 72-112 (116)
151 4ay0_A Chaperone protein CAF1M 25.3 96 0.0033 27.3 5.4 22 114-135 64-85 (218)
152 3q48_A Chaperone CUPB2; IG fol 25.1 55 0.0019 29.8 3.8 22 114-135 83-104 (257)
153 2p9r_A Alpha-2-M, alpha-2-macr 24.8 60 0.0021 24.4 3.5 69 120-194 13-84 (102)
154 2k6w_A Putative uncharacterize 24.4 2.6E+02 0.0088 21.9 9.2 85 118-211 20-106 (120)
155 2kcq_A MOV34/MPN/PAD-1 family; 23.3 32 0.0011 28.5 1.7 6 12-17 80-85 (153)
156 2kks_A Uncharacterized protein 22.5 34 0.0011 28.1 1.7 6 12-17 78-83 (146)
157 4djm_A DRAB; chaperone, PILI; 21.2 89 0.003 28.0 4.3 22 114-135 72-93 (239)
158 3p6b_A Cellulose 1,4-beta-cell 20.9 4E+02 0.014 23.0 8.4 58 117-182 97-160 (205)
159 3gfu_C Chaperone protein FAEE; 20.8 59 0.002 28.9 3.0 22 114-135 52-73 (224)
160 3pu9_A Protein serine/threonin 20.4 1.7E+02 0.0057 25.8 6.1 30 127-158 109-138 (242)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=2.4e-88 Score=712.12 Aligned_cols=461 Identities=69% Similarity=1.242 Sum_probs=359.3
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
|+|.+.|+||||||||++.|+++||+|+|||+++++...|+++|+|++|+|+||+++...+++..+...+..|.+.++++
T Consensus 91 Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (552)
T 1aoz_A 91 YNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFHYDGEINLLLSDWWHQSIHKQEVGLSSKPIRWIGEPQTI 170 (552)
T ss_dssp EEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSCCSEEEEEEEEEECSSCHHHHHHHTTSSSCCCCCSCSEE
T ss_pred EEEECCCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCCCCccceEEeecccCCCHHHHHhhhhcccccCCCCCCeE
Confidence 78899999999999999999999999999999987655678889999999999999988777655544333344578999
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccccee
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPF 161 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~ 161 (463)
||||++.++|+....+. .....|+..++..+.++.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++|+
T Consensus 171 liNG~~~~~c~~~~~~~-~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~ 249 (552)
T 1aoz_A 171 LLNGRGQFDCSIAAKYD-SNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPF 249 (552)
T ss_dssp EETTBCCSSSBTTGGGC-TTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEEETTEEEEEE
T ss_pred EECCccccCcccCcccc-cccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEEECCcccCce
Confidence 99999999998633221 12234663323344556899999999999999999999999999999999999999999999
Q ss_pred eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 012467 162 EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNK 241 (463)
Q Consensus 162 ~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 241 (463)
.++.|.|+|||||||+|+++..+.|+|||++............+|+|+|.++.....+..+.|..|.+++......+...
T Consensus 250 ~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~ 329 (552)
T 1aoz_A 250 YTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYR 329 (552)
T ss_dssp EESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTT
T ss_pred EEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCCCCccEEEEEEECCCCCCCCCCCCCCCCCcccccccccccccc
Confidence 99999999999999999995435789999998765323456789999998754322222333444544443222111111
Q ss_pred ccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCC
Q 012467 242 IFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVN 321 (463)
Q Consensus 242 ~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 321 (463)
.........++...++++.+....+..++...|+|||.+|..|..|+|.+.+.++++.|+...++..+..+|+...++.+
T Consensus 330 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~ 409 (552)
T 1aoz_A 330 ITAAMGSPKPPVKFNRRIFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN 409 (552)
T ss_dssp CCBCTTCCCCCSSCSEEEEEEEEEEEETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCC
T ss_pred ccccCCCCCCCCCCcEEEEEEEeeccCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCcccccccccccccccc
Confidence 11111112345567899988876655556678999999999999999988887777766544433222112332222223
Q ss_pred CCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCc
Q 012467 322 ANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYG 401 (463)
Q Consensus 322 ~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g 401 (463)
...+.++.++.++.|++|+|+|+|.+.+.+...+.||||||||+|+||++|.|.|++.++..+|+.+|+|||||.|+++|
T Consensus 410 ~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g 489 (552)
T 1aoz_A 410 EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYG 489 (552)
T ss_dssp TTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTE
T ss_pred ccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCc
Confidence 34566777899999999999999987541112347999999999999999999998765678999999999999999999
Q ss_pred EEEEEEEcCCceeeeecccchHhHHccceeeeeccccccccCCCCCccccCcccCCCCCCCC
Q 012467 402 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 463 (463)
Q Consensus 402 ~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~~ 463 (463)
|++|||+|||||.|+|||||++|++.|||++|.|++++++++|++++.|+.+++.+++|+-|
T Consensus 490 ~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C~~~~~~~~~~~~~ 551 (552)
T 1aoz_A 490 WTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551 (552)
T ss_dssp EEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGGGCCCCCHHHHSSHHHHHHHSCCCSC
T ss_pred eEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCchhhccCCcchhhhhccCcccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999988888643
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=7.3e-80 Score=643.00 Aligned_cols=400 Identities=25% Similarity=0.404 Sum_probs=308.9
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcce-EEEEeeeecccHHHHHhhhcCCCCCCCCCCCe
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQT 80 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~-~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (463)
|+|.+.|+||||||||.+.|+.+||+|+|||+++++ ..||.|. +|+|+||+++...++.......+ .+.+|+
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~----~~yD~d~~~l~l~Dw~~~~~~~~~~~~~~~~---~~~~d~ 227 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPAT----ADYDEDVGVIFLQDWAHESVFEIWDTARLGA---PPALEN 227 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHTTSC---CCCBSE
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCccc----CCCCccceEEEEEEEecCCHHHHHHHHhccC---CCCCce
Confidence 889999999999999999999999999999998754 4689888 99999999999888876655432 468899
Q ss_pred EEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce
Q 012467 81 LLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP 160 (463)
Q Consensus 81 ~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P 160 (463)
+||||++.++|+... ...|. .....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 228 ~liNG~~~~~c~~~~------~~~~~----~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~~v~P 297 (580)
T 3sqr_A 228 TLMNGTNTFDCSAST------DPNCV----GGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVPIVP 297 (580)
T ss_dssp EEETTBCCCCCTTCC------CTTBC----CCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEE
T ss_pred EEECCcccCCCcccc------ccccc----cCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCccCCc
Confidence 999999999887521 12443 23345689999999999999999999999999999999999999999999
Q ss_pred eeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC---CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccccc
Q 012467 161 FEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKS 237 (463)
Q Consensus 161 ~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~---~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~ 237 (463)
+.++.|.|++||||||+|++++ ++|+||||+.....|. ......|||+|.++... .|..+.+........
T Consensus 298 ~~~~~l~i~pGqRydVlv~a~~-~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~------~P~~~~~~~~~~~~~ 370 (580)
T 3sqr_A 298 YTTDTLLIGIGQRYDVIVEANA-AADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA------NPTSVGTTPRGTCED 370 (580)
T ss_dssp EEESSEEECTTCEEEEEEECCS-CSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC------CCCCCCCCCCCCSCC
T ss_pred eEeeEEEEccceEEEEEEEeCC-CCCeEEEEEecccccCccCCCCceEEEEEECCCCCC------CCCCCCCCccchhhc
Confidence 9999999999999999999998 5789999998876663 22357999999864321 122222222111111
Q ss_pred c-cccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCC-CCCCCccccccCCCCCCCCCCCCCCCCCCccc
Q 012467 238 F-SNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTL-PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDV 315 (463)
Q Consensus 238 ~-~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~-p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~ 315 (463)
. ...|.+..+ ...|...+.++.+.+. .++...|+|||.+|.. ++.|.|.+.+.+. ..|. + +
T Consensus 371 ~~~~~L~P~~~-~~~~~~~~~~~~l~~~---~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~-~~~~----~-----~--- 433 (580)
T 3sqr_A 371 EPVASLVPHLA-LDVGGYSLVDEQVSSA---FTNYFTWTINSSSLLLDWSSPTTLKIFNNE-TIFP----T-----E--- 433 (580)
T ss_dssp SCGGGCCBSSC-CBCCSEEEEEEEEEEE---ESSSEEEEETTBCCCCCTTSCHHHHHHTTC-CCCC----G-----G---
T ss_pred ccccccccCCC-CCCCCccceEEEEEec---cCCceeEEECCEecccCCCCCchhhhhcCC-ccCC----C-----C---
Confidence 1 122322221 2223344555555442 2356789999999975 5888887654321 1220 0 1
Q ss_pred CCCCCCCCccccceEEEc----cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc-ccccCCCCCCC
Q 012467 316 MKPPVNANTTLGSGVYML----GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE-DEKKFNLKNPP 390 (463)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~----~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~-~~~~~n~~~p~ 390 (463)
..++.+ +.|++|||+|+|.+.. .+.||||||||+|+||++|.|.|+++ ++..+|+.||+
T Consensus 434 ------------~~~~~~~~~~~~~~~VeiVi~n~~~~----~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~ 497 (580)
T 3sqr_A 434 ------------YNVVALEQTNANEEWVVYVIEDLTGF----GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPP 497 (580)
T ss_dssp ------------GCEEEECC----CCEEEEEEEECSSS----CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCC
T ss_pred ------------cceeecccccCCCcEEEEEEeCCCcc----ccceeeEecCceEEEEecCCCccCccccccccccCCCc
Confidence 123444 4699999999998722 12899999999999999999999876 56789999999
Q ss_pred ccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CCCC-CccccCcccCCC
Q 012467 391 LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTGKRFM 458 (463)
Q Consensus 391 ~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~~~~~ 458 (463)
+|||+.|+++||++|||++||||.|+|||||++|++.||+++|+|+++++++ +|+. ...|..|+.+..
T Consensus 498 ~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~~i~~~~~~~~~~~~~C~~~~~~~~ 569 (580)
T 3sqr_A 498 RRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQSSIAVKMTDTAIFEDTCANWNAYTP 569 (580)
T ss_dssp EESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGGGCCCCHHHHHHHHHHHHHHHHHGG
T ss_pred eeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHHHHhhccCCcHHHHHhhHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999998875 3444 578998876443
No 3
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-76 Score=617.15 Aligned_cols=389 Identities=27% Similarity=0.409 Sum_probs=295.7
Q ss_pred cccccc-cceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCC--CCCCCCCC
Q 012467 2 LDVWQV-QAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSR--PLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~--~~~~~~~~ 78 (463)
|+|.+. |+||||||||++.|+++||+|+|||+++++ |+.||+|++|+|+||+++...++...+... .....+.+
T Consensus 91 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~~~d~e~~l~l~Dw~~~~~~~~~~~~~~~~~~~g~~~~~ 167 (534)
T 1zpu_A 91 YNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PYDYDEELSLSLSEWYHDLVTDLTKSFMSVYNPTGAEPIP 167 (534)
T ss_dssp EEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CSCCSEEEEEEEEEECSSCHHHHHHHHSSTTCTTCCCCCC
T ss_pred EEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CCCCcceEEEEeeccccCCHHHHHHHHhccccCCCCCCCC
Confidence 788888 999999999999999999999999999864 678899999999999999988876554322 11114578
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
+.+||||+..+ +++|++||+|||||||+|+.+.+.|+|+||+|+|||+||+++
T Consensus 168 d~~liNG~~~~---------------------------~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 220 (534)
T 1zpu_A 168 QNLIVNNTMNL---------------------------TWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITT 220 (534)
T ss_dssp SEEEETTBSSC---------------------------EEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred ceEEECCCCce---------------------------EEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCc
Confidence 99999999754 799999999999999999999999999999999999999999
Q ss_pred ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC------CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCC
Q 012467 159 QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPITPRWDDY 232 (463)
Q Consensus 159 ~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~------~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~ 232 (463)
+|..++.|.|++||||||+|++++.+.++|||++.....+. ......++|+|.++.... .+ +..+.+...
T Consensus 221 ~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p-~~---~~~~~~~~~ 296 (534)
T 1zpu_A 221 EKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP-TQ---NYVDSIDNF 296 (534)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC-CC---CCCSCSSCS
T ss_pred cccEeceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC-CC---Ccccccccc
Confidence 99999999999999999999998755679999998654321 234567999998643211 00 001111110
Q ss_pred cccccccccccccCCCCCCCCccceEEEEEeeeec-cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCC
Q 012467 233 DHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT-INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 311 (463)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~ 311 (463)
... ..+.+... ...+..+++++.+...... .++...|+|||++|..|+.|.|.+.... +.+. . .+..+
T Consensus 297 --~~~--~~l~p~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~--~~~~-~-~~~~~-- 365 (534)
T 1zpu_A 297 --LDD--FYLQPYEK-EAIYGEPDHVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSS--GDQA-N-NSEIY-- 365 (534)
T ss_dssp --CCG--GGCCBSSC-CCCCCSCSEEEEEEEEEEECTTSCEEEEETTBCCCCCSSCHHHHHTTS--GGGT-T-CGGGG--
T ss_pred --ccc--ccceeCCC-CCCCCCCCeEEEEEEEeeccCCceeEEEECCCcccCCCCCceeeeccc--Cccc-C-CCccc--
Confidence 000 11222211 1223456788887765432 2455679999999999998988765421 1110 0 01000
Q ss_pred CcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCC----------CCCcccc
Q 012467 312 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG----------KFTKEDE 381 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g----------~~~~~~~ 381 (463)
..++.++.++.|++|+|+|+|.+.+ .||||||||+|+||+++.+ .|++.+.
T Consensus 366 -------------~~~~~~~~~~~g~~v~ivi~N~~~~------~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~ 426 (534)
T 1zpu_A 366 -------------GSNTHTFILEKDEIVEIVLNNQDTG------THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNH 426 (534)
T ss_dssp -------------CSSSCEEEECTTCEEEEEEEECSSS------CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBC
T ss_pred -------------CCCceEEEeCCCCEEEEEEeCCCCC------CCCeEecCCceEEEeecCCccccccCcccccCcccc
Confidence 1123468999999999999998876 9999999999999999864 3432221
Q ss_pred ccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc-----CCC-CCccccCccc
Q 012467 382 KKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN-----IPN-QALACGLTGK 455 (463)
Q Consensus 382 ~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~-----~P~-~~~~C~~~~~ 455 (463)
.. ...+|+|||||.|++++|++|||++||||.|+|||||++|++.|||++|.|+++++++ +|+ ..+.|..+..
T Consensus 427 ~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~~~~~~~~~~~p~~~~~~C~~~~~ 505 (534)
T 1zpu_A 427 PA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPFGIQDAHSQQLSENHLEVCQSCSV 505 (534)
T ss_dssp CC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHHHCGGGSCCHHHHHHHHHTTC
T ss_pred cc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECccccccccccCCChhHhhhhhccCC
Confidence 22 2468999999999999999999999999999999999999999999999999887754 344 4578888754
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=1.6e-75 Score=603.40 Aligned_cols=380 Identities=27% Similarity=0.498 Sum_probs=287.9
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCC-CCCCCCC-cceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGE-KEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~-~~p~~~d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+ .|+||||||||.+.|+.+||+|+|||+++++. ..++++| +|++|+|+||+++...+. +. .+..+
T Consensus 95 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~~-------~~-~p~~~ 166 (499)
T 3pxl_A 95 YDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLG-------PR-FPGGA 166 (499)
T ss_dssp EEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTTS-------CS-SCSSC
T ss_pred EEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCccccc-------cC-CCCCC
Confidence 78888 68999999999999999999999999988651 1234554 578999999999875421 11 14478
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
|++||||++++.|.. ....+.++|++||+|||||||+|..+.+.|+|+||+|+|||+||.++
T Consensus 167 d~~liNG~~~~~~~~------------------~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~ 228 (499)
T 3pxl_A 167 DATLINGKGRAPSDS------------------VAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNS 228 (499)
T ss_dssp SEEEETTBCCCTTCT------------------TCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred cEEEECCCCcCCCCC------------------CCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCccc
Confidence 999999999875532 23446899999999999999999999999999999999999999999
Q ss_pred ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012467 159 QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236 (463)
Q Consensus 159 ~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~--~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~ 236 (463)
+|+.++.|.|++||||||+|++++ +.|+||||+.....+.. .....|+|+|.++.... +.+ +.........
T Consensus 229 ~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~-----~~~~~~~~~~ 301 (499)
T 3pxl_A 229 QPLEVDSIQIFAAQRYSFVLDANQ-AVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVE-PTT-----NQTTSVKPLN 301 (499)
T ss_dssp EEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCC-----CCCCCSSBCC
T ss_pred CceEeeeEEECCCcEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEeCCCCCCC-CCC-----CCCCCCcccc
Confidence 999999999999999999999998 56899999987544432 22357999998653221 111 1111111111
Q ss_pred cccccccccCCC--C--CCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCC
Q 012467 237 SFSNKIFALMGS--P--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 312 (463)
Q Consensus 237 ~~~~~~~~~~~~--~--~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~ 312 (463)
...|.+.... + ..+..+|+++.+.+..+ + ..|+|||.+|..|+.|.|.+...+..... +
T Consensus 302 --~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-----------~ 364 (499)
T 3pxl_A 302 --EVDLHPLVSTPVPGAPSSGGVDKAINMAFNFN---G-SNFFINGASFVPPTVPVLLQILSGAQTAQ-----------D 364 (499)
T ss_dssp --GGGCCBSSCCCCSSCSSTTCSSEEEECCEEEC---S-SCEEETTBCCCCCSSCHHHHHHTTCCSTT-----------T
T ss_pred --cccccccccccCCCcccCCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCchhhhhhcCCcccc-----------c
Confidence 1223332211 1 12235677777665432 2 27999999999999998876643221100 0
Q ss_pred cccCCCCCCCCccccceEEEccCCCEEEEEEE---eCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCC
Q 012467 313 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ---NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNP 389 (463)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~---N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p 389 (463)
......++.++.|++|+|+|+ |.+.+ .||||||||+|+||+.+ | ...+|+.||
T Consensus 365 -----------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~------~HP~HLHGh~F~Vl~~~-g------~~~~n~~~P 420 (499)
T 3pxl_A 365 -----------LLPSGSVYVLPSNASIEISFPATAAAPGA------PHPFHLHGHTFAVVRSA-G------STVYNYDNP 420 (499)
T ss_dssp -----------SSSTTSEEEECTTCEEEEEEECCTTSCSC------SCEEEETTCCEEEEECT-T------CCCCCSSSC
T ss_pred -----------cCCCceeEEecCCCEEEEEEecCcccCCC------CccceecCCcEEEEecc-C------CcccccCCC
Confidence 011223789999999999999 44444 89999999999999864 2 234778999
Q ss_pred CccceEEeCC---CcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CCCC-CccccCccc
Q 012467 390 PLKNTAVIFP---YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTGK 455 (463)
Q Consensus 390 ~~rDTv~v~~---~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~~ 455 (463)
+||||+.|++ |+|++|||+|||||.|+|||||++|++.||+++|+|+++++++ +|+. ...|..|+.
T Consensus 421 ~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~~ 493 (499)
T 3pxl_A 421 IFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDTPDVKAVNPVPQAWSDLCPTYDA 493 (499)
T ss_dssp CEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHHT
T ss_pred CccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEChhHhccccCCCHHHHHhhhHhhc
Confidence 9999999997 9999999999999999999999999999999999999998864 4544 579988764
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=3.8e-75 Score=600.70 Aligned_cols=382 Identities=27% Similarity=0.456 Sum_probs=287.3
Q ss_pred ccccc-ccceeEEEeccchhhhhcceeeEEEEeCCCCC-CCCCCCC-cceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQ-VQAGTYFYHGHLGMQRSAGLYGSLIVDVADGE-KEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~-~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~-~~p~~~d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+ .|+||||||||.+.|+.+||+|+|||+++++. ..++++| +|++|+|+||+++...++ . ... +..+
T Consensus 96 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~-----~-~~~-p~~~ 168 (495)
T 3t6v_A 96 YNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM-----G-AGG-AITA 168 (495)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS-----C-SSS-CCCC
T ss_pred EEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh-----c-cCC-CCCC
Confidence 78888 68999999999999999999999999988651 1234553 578999999999876542 1 111 4478
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
|++||||+++..|.. .....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||.++
T Consensus 169 d~~liNG~g~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 231 (495)
T 3t6v_A 169 DSTLIDGLGRTHVNV-----------------AAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDS 231 (495)
T ss_dssp SEEEETTBCCBSSSC-----------------CCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred cEEEECCcCcCCCCc-----------------ccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCccc
Confidence 999999998874431 022346899999999999999999999999999999999999999999
Q ss_pred ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012467 159 QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236 (463)
Q Consensus 159 ~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~--~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~ 236 (463)
+|+.++.|.|+|||||||+|++++ +.|+||||+.....+.. .....|+|+|.++.... +....+.. . .....
T Consensus 232 ~P~~~~~l~i~pGqR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~-p~~~~~~~-~---~~~~~ 305 (495)
T 3t6v_A 232 QELTVDEIQIFAAQRYSFVLNANQ-PVGNYWIRANPNSGGEGFDGGINSAILRYDGATTAD-PVTVASTV-H---TKCLI 305 (495)
T ss_dssp EEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSC-CCCCCCSS-C---SSBCC
T ss_pred CCEEeeeEEEcCceEEEEEEECCC-CCceEEEEEecccCccccCCCceEEEEEECCCCCCC-CCCCCCCC-C---ccccc
Confidence 999999999999999999999998 56899999987544432 22357999998653321 11111100 0 00111
Q ss_pred cccccccccCCC--C--CCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCC
Q 012467 237 SFSNKIFALMGS--P--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 312 (463)
Q Consensus 237 ~~~~~~~~~~~~--~--~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~ 312 (463)
...|.+.... + ..+..+|+++.+.+..+ + ..|+|||.+|..|+.|.|.+...+..... +
T Consensus 306 --~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~~---~-~~w~iNg~s~~~~~~P~L~~~~~g~~~~~-----------~ 368 (495)
T 3t6v_A 306 --ETDLHPLSRNGVPGNPHQGGADCNLNLSLGFA---C-GNFVINGVSFTPPTVPVLLQICSGANTAA-----------D 368 (495)
T ss_dssp --GGGCCBSSCCCCSSCSSTTCSSEEEECCEEEE---T-TEEEETTBCCCCCSSCHHHHHHTTCCSST-----------T
T ss_pred --cccccccccccCCCccCCCCCcEEEEEEEEec---C-cEEEEcCEecCCCCCcchhhhhcCCcCcc-----------c
Confidence 1123322211 1 12234677776665432 2 27999999999999898876643221100 0
Q ss_pred cccCCCCCCCCccccceEEEccCCCEEEEEEE-eCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCc
Q 012467 313 YDVMKPPVNANTTLGSGVYMLGLNTTVDVILQ-NANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 391 (463)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~-N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~ 391 (463)
......++.++.|++|+|+|+ |.+.+ .||||||||+|+||+.+ | ...+|+.||+|
T Consensus 369 -----------~~~~~~v~~~~~g~~V~ivl~~n~~~~------~HP~HLHGh~F~vl~~~-g------~~~~n~~~P~~ 424 (495)
T 3t6v_A 369 -----------LLPSGSVISLPSNSTIEIALPAGAAGG------PHPFHLHGHDFAVSESA-S------NSTSNYDDPIW 424 (495)
T ss_dssp -----------SSSTTSEEEECTTCEEEEEEECCSSSC------CCEEEETTCCEEEEECT-T------CCCCCSSSCCE
T ss_pred -----------ccCCcceEEecCCCEEEEEEccCCCCC------CcceeecCCcEEEEecC-C------CCCcccCCCCC
Confidence 011223789999999999999 55555 89999999999999864 2 23477889999
Q ss_pred cceEEeCC-CcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CCCC-CccccCcc
Q 012467 392 KNTAVIFP-YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IPNQ-ALACGLTG 454 (463)
Q Consensus 392 rDTv~v~~-~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P~~-~~~C~~~~ 454 (463)
|||+.|++ |+|++|||+|||||.|+|||||++|++.||+++|+|+++++++ +|+. ...|..|.
T Consensus 425 rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 425 RDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDIPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp ESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETHHHHHHHCCCCHHHHHHHHHHH
T ss_pred ccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEChhHhccccCCCHHHHHHhhHhh
Confidence 99999997 8999999999999999999999999999999999999998864 4544 57897764
No 6
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1e-74 Score=608.03 Aligned_cols=393 Identities=24% Similarity=0.390 Sum_probs=294.9
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCCcce-EEEEeeeecccHHHHHhhhcCCCCCCCCCCCe
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYDGEF-NLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQT 80 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~-~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~ 80 (463)
|+|.+.|+||||||||.+.|+++||+|+|||++++. ..||+|. +|+|+||+++...++..... . +. .+.+++
T Consensus 125 Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~----~~~d~d~~~l~l~Dw~~~~~~~~~~~~~-~-~~-~~~~d~ 197 (559)
T 2q9o_A 125 YRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGPAS----LPYDIDLGVFPITDYYYRAADDLVHFTQ-N-NA-PPFSDN 197 (559)
T ss_dssp EEEECCSCEEEEEEECSTTGGGGTCEEEEEEECCCS----SCCSEEEEEEEEEEECSSCHHHHHHHHT-T-SC-CCCBSE
T ss_pred EEEECCCCEEEEEEEcccchhcCCceEEEEecCCCc----CCCcccceEEEEeccccCCHHHHhhhhh-c-CC-CCccce
Confidence 789999999999999999999999999999998754 4688887 99999999999887754332 1 11 457899
Q ss_pred EEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce
Q 012467 81 LLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP 160 (463)
Q Consensus 81 ~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P 160 (463)
+||||+..+.|.. ....+.++|++||+|||||||+|+.+.+.|+|+||+|+|||+||++++|
T Consensus 198 ~liNG~~~~~~~~------------------~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p 259 (559)
T 2q9o_A 198 VLINGTAVNPNTG------------------EGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259 (559)
T ss_dssp EEETTBCBCTTTC------------------CBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred eEECCccccCcCC------------------CCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCc
Confidence 9999999875542 1234589999999999999999999999999999999999999999999
Q ss_pred eeEeeEEecCCceEEEEEecCCCCCCceEEEEEe--cCCCC--CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccc
Q 012467 161 FEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV--RGRKP--ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 236 (463)
Q Consensus 161 ~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~--~~~~~--~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~ 236 (463)
+.++.|.|+|||||||+|++++ .+|+|||++.. ...|. ......|+|+|.++... .+.... .+. .+.....
T Consensus 260 ~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~-~P~~~~--~~~-~~~~~~~ 334 (559)
T 2q9o_A 260 MTVDSLFLAVGQRYDVVIDASR-APDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGG-LPTDEG--TPP-VDHQCLD 334 (559)
T ss_dssp EEESCEEECTTCEEEEEEECCS-CSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCS-CCCCCC--CCC-CCCTTCC
T ss_pred eEeCeEEEccEEEEEEEEECCC-CCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCC-CCCCCC--CcC-CCccccc
Confidence 9999999999999999999987 57899999987 43342 23456899999865321 111110 000 0100000
Q ss_pred cccccccccCCC--CCC--CCccceEEEEEeeeeccCCeEEEEEecccCCCC-CCCCccccccCCCCCCCCCCCCCCCCC
Q 012467 237 SFSNKIFALMGS--PKP--PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLP-PTPYLGSIKYGLKDAFDQNGPPENFSN 311 (463)
Q Consensus 237 ~~~~~~~~~~~~--~~~--p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p-~~p~l~~~~~~~~~~~~~~~~p~~~~~ 311 (463)
. ..+.+..+. +.. ....+.++.+.... ...+...|+|||.+|..+ ..|.|.....+.. .|.
T Consensus 335 ~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~-~~~---------- 400 (559)
T 2q9o_A 335 T--LDVRPVVPRSVPVNSFVKRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGNT-SYP---------- 400 (559)
T ss_dssp C--SCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCC-CCC----------
T ss_pred c--cccccCCCCCCCCcccccceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCCc-cCC----------
Confidence 0 112221111 111 11223455544321 112346899999999764 6777765543221 120
Q ss_pred CcccCCCCCCCCccccceEEEccC-CCEEEEEEEeCC----CCCCCCCCCCCeeecCCceEEEeecC---------CCCC
Q 012467 312 EYDVMKPPVNANTTLGSGVYMLGL-NTTVDVILQNAN----AIRPNLSEIHPWHLHGHDFWVLGRGE---------GKFT 377 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~vl~N~~----~~~~~~~~~HP~HlHG~~f~vl~~g~---------g~~~ 377 (463)
.+..++.++. +++++|+++|.+ .+ .||||||||+|+||+++. |.|+
T Consensus 401 --------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~------~HP~HLHGh~F~Vl~~g~~~~~~~~~~g~~~ 460 (559)
T 2q9o_A 401 --------------VSDNIVQVDAVDQWTYWLIENDPEGPFSL------PHPMHLHGHDFLVLGRSPDVPAASQQRFVFD 460 (559)
T ss_dssp --------------GGGCEEEECCSSCEEEEEEEECTTSSCCC------CEEEEESSSCEEEEEESCCCCTTSCCCCCCC
T ss_pred --------------CCceEEEcCCCCEEEEEEEeCCCccccCC------CCcEEECCCceEEEecccccccccccccccC
Confidence 1123466664 578888999865 45 899999999999999987 7777
Q ss_pred cc-ccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccccccccC-----CC-CCccc
Q 012467 378 KE-DEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNI-----PN-QALAC 450 (463)
Q Consensus 378 ~~-~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~-----P~-~~~~C 450 (463)
+. ++..+|+.+|+|||||.|++++|++|||+|||||.|||||||++|++.|||++|+|++++++++ |. ..+.|
T Consensus 461 ~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~~~p~~~~~~C 540 (559)
T 2q9o_A 461 PAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVC 540 (559)
T ss_dssp HHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHGGGCCHHHHHHHHHHH
T ss_pred ccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchhhhccccCCchhhhhhc
Confidence 54 4567899999999999999999999999999999999999999999999999999999888753 43 46899
Q ss_pred cCcccCCC
Q 012467 451 GLTGKRFM 458 (463)
Q Consensus 451 ~~~~~~~~ 458 (463)
+.|+.+..
T Consensus 541 ~~~~~~~~ 548 (559)
T 2q9o_A 541 DEWRAYWP 548 (559)
T ss_dssp HHHHHHGG
T ss_pred cccccccc
Confidence 99988543
No 7
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=4e-74 Score=599.20 Aligned_cols=389 Identities=28% Similarity=0.472 Sum_probs=285.6
Q ss_pred cccc-cccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCC--C-cceEEEEeeeecccHHHHHhhhcCCCCCCCCC
Q 012467 2 LDVW-QVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY--D-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGE 77 (463)
Q Consensus 2 ~~~~-~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~--d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~ 77 (463)
|+|. +.|+||||||||.+.|+++||+|+|||+++++ +.+..| | +|++|+|+||+++...++... .... .+.
T Consensus 116 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~D~~~~~~~~~~~~---~~~~-~~~ 190 (521)
T 1v10_A 116 YDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPND-PHLSLYDVDDASTVITIADWYHSLSTVLFPN---PNKA-PPA 190 (521)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSGGGEEEEEEECSSCCC----------CC-CSC
T ss_pred EEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcc-cccccCCCCCceeEEEEcccccCCHHHHhhc---cCCC-CCC
Confidence 7788 57999999999999999999999999999864 223334 3 699999999999987765421 1111 356
Q ss_pred CCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc
Q 012467 78 PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 78 ~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~ 157 (463)
+|++||||++.++|.. .....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++
T Consensus 191 ~d~~liNG~~~~~~~~-----------------~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 191 PDTTLINGLGRNSANP-----------------SAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp CSEEEETTBCCCSSCG-----------------GGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred CCEEEECCcccCCCCC-----------------CCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 8999999999876641 12234689999999999999999999999999999999999999999
Q ss_pred cceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC--CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCccc
Q 012467 158 VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA--TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 235 (463)
Q Consensus 158 v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~--~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~ 235 (463)
++|+.++.+.|+|||||||+|++++ ++|+|||++.....+.. .....|+|+|+++.... +.. +.+ .....
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~-~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~-p~~-----~~~-~~~~~ 325 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQ-AVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAE-PTT-----SQN-SGTAL 325 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCC-CCC-----CCC-CSCBC
T ss_pred ccceeeeeEEEcccceEEEEEEcCC-CCCceeeeeccccccccCCCCceeEEEEECCCCCCC-CCC-----CCC-ccccc
Confidence 9999999999999999999999987 56899999987643321 12346999998654321 111 111 00000
Q ss_pred ccccccccccCC--CCC--CCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCC
Q 012467 236 KSFSNKIFALMG--SPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 311 (463)
Q Consensus 236 ~~~~~~~~~~~~--~~~--~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~ 311 (463)
.. ..+.+... .+. .+...++++.+....+ +....|+|||++|..+..|.|.+...+... +.
T Consensus 326 ~~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~--~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~-------~~---- 390 (521)
T 1v10_A 326 NE--ANLIPLINPGAPGNPVPGGADINLNLRIGRN--ATTADFTINGAPFIPPTVPVLLQILSGVTN-------PN---- 390 (521)
T ss_dssp CG--GGCCBSSCCCCSSCSSTTCSSEEEECCEECC--SSSSCCEESSCCCCCCSSCHHHHHHHTCCC-------GG----
T ss_pred ch--hhcccCCcccCCCcccCCcceEEEEEEEecC--CceeEEEECCCcccCCCCchhhhhhcCCcc-------cc----
Confidence 00 12222211 111 1123455554443221 122369999999998888877665422110 00
Q ss_pred CcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCc
Q 012467 312 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL 391 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~ 391 (463)
++ +.+..++.++.|++|+|+|+| .+ .||||||||+|+||+++.+. .+|+.+|.|
T Consensus 391 ~~-----------~~~~~~~~v~~g~~vei~l~N--~~------~HP~HLHGh~F~Vl~~~~~~-------~~n~~~p~~ 444 (521)
T 1v10_A 391 DL-----------LPGGAVISLPANQVIEISIPG--GG------NHPFHLHGHNFDVVRTPGSS-------VYNYVNPVR 444 (521)
T ss_dssp GS-----------SSTTTEEEECTTCEEEEEEEC--CB------SCEEEESSCCEEEEECTTCS-------CCCCSSCCE
T ss_pred cC-----------CCCceEEEecCCCEEEEEEcC--CC------CCCEEEccceEEEEecCCCC-------ccccCCCCe
Confidence 00 112346899999999999999 45 89999999999999997543 256789999
Q ss_pred cceEEe-CCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CC-CCCccccCcccCCCCCC
Q 012467 392 KNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IP-NQALACGLTGKRFMNPK 461 (463)
Q Consensus 392 rDTv~v-~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P-~~~~~C~~~~~~~~~~~ 461 (463)
||||.| ++++|++|||++||||.|+|||||++|++.|||++|.++++++++ +| ...+.|+.|+.+....|
T Consensus 445 rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~~~~~~~ 519 (521)
T 1v10_A 445 RDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKYNANNPDSG 519 (521)
T ss_dssp ESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHTTCC----
T ss_pred eeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhhhchhhhccCCCcC
Confidence 999999 899999999999999999999999999999999999999887753 45 34789999988765443
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=2e-73 Score=592.00 Aligned_cols=379 Identities=28% Similarity=0.521 Sum_probs=284.1
Q ss_pred cccc-cccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCC--C-cceEEEEeeeecccHHHHHhhhcCCCCCCCCC
Q 012467 2 LDVW-QVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHY--D-GEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGE 77 (463)
Q Consensus 2 ~~~~-~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~--d-~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~ 77 (463)
|+|. +.++||||||||.+.|+++||+|+|||+++++ +.+..| | +|++|+|+||+++...++. . .+.
T Consensus 95 Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~------~---~~~ 164 (503)
T 1hfu_A 95 YKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDND-PHAALYDEDDENTIITLADWYHIPAPSIQ------G---AAQ 164 (503)
T ss_dssp EEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTC-TTGGGCSBCSTTSEEEEEEECSSCGGGCC------------C
T ss_pred EEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCC-CcccCCCCCCceEEEEEcccccCChHHhc------C---CCC
Confidence 7788 57899999999999999999999999999864 223334 3 6999999999999876531 1 146
Q ss_pred CCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc
Q 012467 78 PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 78 ~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~ 157 (463)
+|.+||||++.++|.. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||++
T Consensus 165 ~d~~liNG~~~~~~~~------------------~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~ 226 (503)
T 1hfu_A 165 PDATLINGKGRYVGGP------------------AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGEL 226 (503)
T ss_dssp CSEEEETTBCCBTTCC------------------CCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred CCEEEECcccccCCCC------------------CCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcc
Confidence 8999999999876642 2234689999999999999999999999999999999999999999
Q ss_pred cceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC------CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCC
Q 012467 158 VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP------ATPPALTLLNYHPTSASKIPLSPPPITPRWDD 231 (463)
Q Consensus 158 v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~------~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~ 231 (463)
++|+.+++|.|+|||||||+|++++ ++|+|||++.....+. ......|+|+|.++....+.... .|....
T Consensus 227 ~~p~~~~~l~l~pgeR~dvlv~~~~-~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~---~~~~~~ 302 (503)
T 1hfu_A 227 TEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSA---NPNPAQ 302 (503)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCS-CSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCC---CSSCCB
T ss_pred ccccccCeEEEcccceEEEEEEcCC-CccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCC---CCccCC
Confidence 9999999999999999999999987 5689999998653321 11234799999865432111111 111111
Q ss_pred CcccccccccccccCC--CCC--CCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCC
Q 012467 232 YDHSKSFSNKIFALMG--SPK--PPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 307 (463)
Q Consensus 232 ~~~~~~~~~~~~~~~~--~~~--~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~ 307 (463)
. .. ..+.+... .+. .+...+.++.+....+ +. .|+|||++|..+..|.|.+...+... +.
T Consensus 303 l---~~--~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~~---~~-~~~iNg~~~~~~~~P~l~~~~~g~~~-------~~ 366 (503)
T 1hfu_A 303 L---NE--ADLHALIDPAAPGIPTPGAADVNLRFQLGFS---GG-RFTINGTAYESPSVPTLLQIMSGAQS-------AN 366 (503)
T ss_dssp C---CG--GGCBBSSSCSCSSCSSTTCSSEEEECCEEEE---TT-EEEETTBCCCCCSSCHHHHHHTTCCS-------GG
T ss_pred C---cc--ccccccCccCCCCcccCCcceEEEEEEeecc---Cc-eEEECCCccCCCCCcchhhhhcCCcc-------cc
Confidence 1 00 12222211 111 1123455554443221 22 79999999998888887765422110 00
Q ss_pred CCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEe-CCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCC
Q 012467 308 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN-ANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNL 386 (463)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N-~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~ 386 (463)
+ .+.+..++.++.|++|+|+++| .+.+ .||||||||+|+||+++.+. .+|+
T Consensus 367 ----~-----------~~~~~~~~~v~~g~~vei~l~~n~~~~------~HP~HLHGh~F~Vl~~~~~~-------~~n~ 418 (503)
T 1hfu_A 367 ----D-----------LLPAGSVYELPRNQVVELVVPAGVLGG------PHPFHLHGHAFSVVRSAGSS-------TYNF 418 (503)
T ss_dssp ----G-----------SSSTTSEEEECSSCEEEEEEECCSTTC------CCEEEETTCCEEEEECTTCC-------CCCC
T ss_pred ----c-----------CCCCceEEEccCCCEEEEEEECCCCCC------CCCEEEecceEEEEecCCCC-------cccc
Confidence 0 0112346899999999999995 4445 89999999999999997543 2567
Q ss_pred CCCCccceEEe-CCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecccccccc---CC-CCCccccCcccC
Q 012467 387 KNPPLKNTAVI-FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN---IP-NQALACGLTGKR 456 (463)
Q Consensus 387 ~~p~~rDTv~v-~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~---~P-~~~~~C~~~~~~ 456 (463)
.+|.|||||.| ++++|++|||++||||.|+|||||++|++.|||++|.++++++++ +| ...+.|+.|+.+
T Consensus 419 ~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~~ 493 (503)
T 1hfu_A 419 VNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDDL 493 (503)
T ss_dssp SSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHHHHHHTC
T ss_pred CCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhhccchhhc
Confidence 89999999999 999999999999999999999999999999999999999887753 45 347899998765
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=5.4e-67 Score=535.53 Aligned_cols=319 Identities=26% Similarity=0.325 Sum_probs=244.6
Q ss_pred ccccc--ccceeEEEeccc----hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCC
Q 012467 2 LDVWQ--VQAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWI 75 (463)
Q Consensus 2 ~~~~~--~~~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~ 75 (463)
|+|.+ .++||||||||. +.|+.+||+|+|||+++++......+++|++|+|+||+++... ... .........
T Consensus 97 Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~~~~~e~~l~l~D~~~~~~~-~~~-~~~~~~~~g 174 (439)
T 2xu9_A 97 YEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAEEHLLVLKDLALQGGR-PAP-HTPMDWMNG 174 (439)
T ss_dssp EEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHHHTSEEEEEEEEEECEETTE-ECC-CCHHHHHHC
T ss_pred EEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccCCCCCcEEEEEEeeeeCCCC-cCC-CCccccccC
Confidence 67775 479999999995 7899999999999998764211234689999999999998631 100 000000002
Q ss_pred CCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCC
Q 012467 76 GEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG 155 (463)
Q Consensus 76 ~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG 155 (463)
..++.++|||+..+ .++|++| +|||||||+|+.+.+.|+|+||+|+|||+||
T Consensus 175 ~~~~~~~iNG~~~p---------------------------~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG 226 (439)
T 2xu9_A 175 KEGDLVLVNGALRP---------------------------TLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADG 226 (439)
T ss_dssp CCCSEEEETTEESC---------------------------EEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETT
T ss_pred CCCCEEEECCccCC---------------------------cEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCC
Confidence 35789999999764 7999999 9999999999999999999999999999999
Q ss_pred ccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC-----------------CCCCeEEEEEeCCCCCCC
Q 012467 156 NYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-----------------ATPPALTLLNYHPTSASK 217 (463)
Q Consensus 156 ~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~-----------------~~~~~~a~l~y~~~~~~~ 217 (463)
+++ +|+.++++.|+|||||||+|++++ +|+|||++.....+. .....+++|+|.+....
T Consensus 227 ~~~~~p~~~~~l~l~pgeR~dv~v~~~~--~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 303 (439)
T 2xu9_A 227 GFLEEPLEVSELLLAPGERAEVLVRLRK--EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP- 303 (439)
T ss_dssp EEEEEEEEESCEEECTTCEEEEEEECCS--SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC-
T ss_pred CCCCCceEeceEEECCceeEEEEEEcCC--CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc-
Confidence 997 899999999999999999999987 588999987543321 11246788999754311
Q ss_pred CCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCC
Q 012467 218 IPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLK 297 (463)
Q Consensus 218 ~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~ 297 (463)
.+.|.. +....+.+. + ..++++.+..... + ..|+|||.+|..+.
T Consensus 304 ---~~~p~~---------------l~~~~~l~~-~-~~~r~~~l~~~~~---g-~~~~iNg~~~~~~~------------ 347 (439)
T 2xu9_A 304 ---LPLPKA---------------LSPFPTLPA-P-VVTRRLVLTEDMM---A-ARFFINGQVFDHRR------------ 347 (439)
T ss_dssp ---CCCCSC---------------CCCCCCCCC-C-SEEEEEEEEEEGG---G-TEEEETTBCCCTTC------------
T ss_pred ---ccCccc---------------CCCcccCCC-C-CcceEEEEEeecc---C-ceEeECCEECCCCC------------
Confidence 111110 000001111 1 2246776665431 1 26999999885321
Q ss_pred CCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCC
Q 012467 298 DAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFT 377 (463)
Q Consensus 298 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~ 377 (463)
. .+.++.|++++|+|+|.+.+ .||||||||+||||+++.+.+
T Consensus 348 -------~------------------------~~~~~~g~~~~~~~~N~~~~------~HP~HLHG~~F~Vl~~~g~~~- 389 (439)
T 2xu9_A 348 -------V------------------------DLKGQAQTVEVWEVENQGDM------DHPFHLHVHPFQVLSVGGRPF- 389 (439)
T ss_dssp -------C------------------------CEEECTTCEEEEEEEECSSS------CEEEEESSCCBEEEEETTEEC-
T ss_pred -------C------------------------ceecCCCCEEEEEEEcCCCC------CCCceeCCCcEEEEeeCCCCC-
Confidence 0 16789999999999999877 999999999999999975543
Q ss_pred ccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 378 KEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 378 ~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
.+|.|||||.|++++|++|||++||||.|+|||||++|++.|||++|.++
T Consensus 390 ---------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 390 ---------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp ---------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred ---------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 36899999999999999999999999999999999999999999999764
No 10
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.4e-65 Score=523.20 Aligned_cols=321 Identities=21% Similarity=0.308 Sum_probs=243.7
Q ss_pred cccccc-cceeEEEecc----chhhhhcceeeEEEEeCCCCCCCCCCCC-cceEEEEeeeecccHHHHHhhhcC-CCCCC
Q 012467 2 LDVWQV-QAGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPFHYD-GEFNLLLSDWWHRSVHEQEVGLSS-RPLRW 74 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~~p~~~d-~e~~l~l~D~~~~~~~~~~~~~~~-~~~~~ 74 (463)
|+|.+. ++|||||||| ++.|+++||+|+|||+++++. .++.|| +|++|+|+||+++. .++.. +.. .....
T Consensus 89 Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~-~~~~~~~~~ 165 (448)
T 3aw5_A 89 YSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVY-NPTPMEMIA 165 (448)
T ss_dssp EEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEEC-CCCHHHHHH
T ss_pred EEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccc-ccccccccc
Confidence 788888 7999999999 999999999999999998763 344677 89999999999987 55432 100 00001
Q ss_pred CCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE--eC---ceeE
Q 012467 75 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV--KN---HKMV 149 (463)
Q Consensus 75 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i--~~---h~~~ 149 (463)
...++.+||||+..+ .++|++| +|||||||+|+.+.+.|+| ++ |+|+
T Consensus 166 ~~~~~~~liNG~~~p---------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~ 217 (448)
T 3aw5_A 166 GFLGNAVLVNGVKDA---------------------------VFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMR 217 (448)
T ss_dssp CCCCSEEEETTEETC---------------------------EEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEE
T ss_pred CccccEEEECCcccc---------------------------eEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEE
Confidence 246899999999864 7999999 9999999999999999999 99 9999
Q ss_pred EEEeCCcccc-eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC-------------CCCCeEEEEEeCCCCC
Q 012467 150 VVEADGNYVQ-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-------------ATPPALTLLNYHPTSA 215 (463)
Q Consensus 150 via~DG~~v~-P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~-------------~~~~~~a~l~y~~~~~ 215 (463)
|||+||++++ |..++.+.|+|||||||+|++++ +.|||++.....+. .....+++|+|.+...
T Consensus 218 via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~---~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (448)
T 3aw5_A 218 LIAVDQGFLARPIEVRALFLAPAERAEVVVELGE---GVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGE 294 (448)
T ss_dssp EEEETTEEEEEEEEESCEEECTTCEEEEEEEECS---EEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECC
T ss_pred EEEeCCCccCCceEeceEEECCcceEEEEEECCC---CceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCC
Confidence 9999999998 99999999999999999999984 58999997654321 1134567888864322
Q ss_pred CCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccC
Q 012467 216 SKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYG 295 (463)
Q Consensus 216 ~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~ 295 (463)
.. . +..++. + +....+...++++.+.... ..|+|||++|..+.
T Consensus 295 ~~--~--p~~L~~-------------l----p~~~~~~~~~~~~~l~~~~------~~~~iNg~~~~~~~---------- 337 (448)
T 3aw5_A 295 AV--P--VEALSD-------------P----PPEPPKPTRTRRFALSLSG------MQWTINGMFWNASN---------- 337 (448)
T ss_dssp CC--C--CCCCSC-------------C----CCCCCCCSEEEEEEEEEET------TEEEETTBCCCTTC----------
T ss_pred CC--C--ccccCC-------------C----CCCCCCCCceEEEEEeCCC------ceeeECCCcCCCCC----------
Confidence 11 0 000000 0 0011223446666665421 25999999885321
Q ss_pred CCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEE-ccCCCEEEEEEEeCC-CCCCCCCCCCCeeecCCceEEEeecC
Q 012467 296 LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYM-LGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGE 373 (463)
Q Consensus 296 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~f~vl~~g~ 373 (463)
| .+. ++.|++|+|+|+|.+ .+ .||||||||+||||+++
T Consensus 338 ----------p-----------------------~~~~~~~g~~v~~~i~N~~~~~------~HP~HLHG~~F~Vl~~~- 377 (448)
T 3aw5_A 338 ----------P-----------------------LFEHVSVEGVELWEIVNDKASM------PHPMHLHGFPMWIIERK- 377 (448)
T ss_dssp ----------T-----------------------TCCCEEECEEEEEEEEECSSSC------CEEEEESSSCBEEEEEE-
T ss_pred ----------C-----------------------ceeccCCCCeEEEEEEcCCCCC------CcCEEECCceEEEEEec-
Confidence 1 134 688999999999987 66 89999999999999984
Q ss_pred CCCCcc-ccccCC----CCCCCccceEEeCCCcEEEEE--EE---cCCceeeeecccchHhHHccceeeeec
Q 012467 374 GKFTKE-DEKKFN----LKNPPLKNTAVIFPYGWTALR--FV---ADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 374 g~~~~~-~~~~~n----~~~p~~rDTv~v~~~g~~~ir--f~---adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|.+... +...++ ..++.|||||.|+++++++|+ |+ +||| |+|||||++|++.|||++|.+
T Consensus 378 G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V 447 (448)
T 3aw5_A 378 DSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAV 447 (448)
T ss_dssp SCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEE
T ss_pred CCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEe
Confidence 555321 222222 234579999999999999665 99 9999 999999999999999999865
No 11
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.6e-65 Score=523.77 Aligned_cols=322 Identities=17% Similarity=0.154 Sum_probs=242.2
Q ss_pred Cccccccc-ceeEEEeccc----hhhhhcceeeEEEEeCCCCCCC--CCCC-CcceEEEEeeeecccHHHHHhhhcCCCC
Q 012467 1 MLDVWQVQ-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKE--PFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPL 72 (463)
Q Consensus 1 ~~~~~~~~-~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~--p~~~-d~e~~l~l~D~~~~~~~~~~~~~~~~~~ 72 (463)
.|+|.+.+ +||||||||. +.|+++||+|+|||+++++... |..| |+|++|+|+||+++...++.... ...
T Consensus 100 ~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~~~--~~~ 177 (451)
T 2uxt_A 100 APVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNE--PGS 177 (451)
T ss_dssp CCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEECCC--CSS
T ss_pred EEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceeccc--ccC
Confidence 38888886 9999999996 8999999999999999865322 3455 78999999999998776543221 111
Q ss_pred CCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE-eCceeEEE
Q 012467 73 RWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVV 151 (463)
Q Consensus 73 ~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~vi 151 (463)
. ...++.+||||+..+ .++|++| +|||||||+|+.+.+.|+| +||+|+||
T Consensus 178 ~-~~~~d~~liNG~~~p---------------------------~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi 228 (451)
T 2uxt_A 178 G-GFVGDTLLVNGVQSP---------------------------YVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVI 228 (451)
T ss_dssp S-CCCCSEEEETTEESC---------------------------EEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEE
T ss_pred C-CCcCCEEEECCcccc---------------------------eEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEE
Confidence 1 457899999999875 7999999 9999999999999999999 89999999
Q ss_pred EeCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----------CCCCeEEEEEeCCCCCCCCCC
Q 012467 152 EADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----------ATPPALTLLNYHPTSASKIPL 220 (463)
Q Consensus 152 a~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----------~~~~~~a~l~y~~~~~~~~~~ 220 (463)
|+||+++ +|..++.+.|+|||||||+|++++ +++|||++.....+. ......++++|..........
T Consensus 229 ~~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 306 (451)
T 2uxt_A 229 SGDQGFLPAPVSVKQLSLAPGERREILVDMSN--GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVT 306 (451)
T ss_dssp ECSSSEEEEEEEESSEEECTTCEEEEEEECTT--CCCEEEEC----------------CCCCSCCEEEEEEECSCCC---
T ss_pred EeCCCccCCceEeceEEECceeEEEEEEEeCC--CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCcc
Confidence 9999998 899999999999999999999996 578999986543221 112345788887432211111
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCC
Q 012467 221 SPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAF 300 (463)
Q Consensus 221 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~ 300 (463)
. ..|. .|.+... .+.+...++++.+. + .|+|||.+|..+.
T Consensus 307 ~---~~p~------------~L~~~~~-~~~~~~~~~~~~l~-------~--~~~iNg~~f~~~~--------------- 346 (451)
T 2uxt_A 307 D---SLPM------------RLLPTEI-MAGSPIRSRDISLG-------D--DPGINGQLWDVNR--------------- 346 (451)
T ss_dssp ----CCCS------------CSSSSCC-CCCCCSEEEEEEEC-------S--SSSBTTBCCCTTC---------------
T ss_pred c---cCcc------------ccCCCCC-CCCCCcceEEEEEe-------e--EEEECCEeCCCCC---------------
Confidence 1 1111 1111111 11122233444332 1 5889999875321
Q ss_pred CCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccc
Q 012467 301 DQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKED 380 (463)
Q Consensus 301 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~ 380 (463)
+ .+.++.|++|+|+|+|. + .||||||||+|+||+++ |.
T Consensus 347 -----~-----------------------~~~~~~G~~~~~~l~N~--~------~HP~HLHGh~F~Vl~~~-G~----- 384 (451)
T 2uxt_A 347 -----I-----------------------DVTAQQGTWERWTVRAD--E------PQAFHIEGVMFQIRNVN-GA----- 384 (451)
T ss_dssp -----C-----------------------CEEEETTCEEEEEEEEE--E------EEEEEETTCEEEEEEET-TB-----
T ss_pred -----C-----------------------cEEcCCCCEEEEEEECC--C------CcCeEECCceEEEEeeC-Cc-----
Confidence 0 16789999999999997 4 89999999999999985 32
Q ss_pred cccCCCCCCCccceEEeCCCcEEEEEEEcCCcee----eeecccchHhHHccceeeeeccccccc
Q 012467 381 EKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGA----WAFHCHIEPHFHIGMGVVLALGVETVG 441 (463)
Q Consensus 381 ~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~----w~~HCHi~~H~~~GM~~~~~~~~~~~~ 441 (463)
.+++.+|.|||||.| +++++|+|++||||. |||||||++|++.|||++|.+.+.++.
T Consensus 385 --~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~~ 445 (451)
T 2uxt_A 385 --MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPRS 445 (451)
T ss_dssp --CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC-
T ss_pred --CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCccc
Confidence 134567899999999 999999999999988 999999999999999999998776553
No 12
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=3.2e-64 Score=524.29 Aligned_cols=333 Identities=19% Similarity=0.216 Sum_probs=242.3
Q ss_pred ccccccc-ceeEEEeccc----hhhhhcceeeEEEEeCCCCCCCCCC--C-CcceEEEEeeeecccHHHHHhhhcCCCCC
Q 012467 2 LDVWQVQ-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPFH--Y-DGEFNLLLSDWWHRSVHEQEVGLSSRPLR 73 (463)
Q Consensus 2 ~~~~~~~-~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~p~~--~-d~e~~l~l~D~~~~~~~~~~~~~~~~~~~ 73 (463)
|+|.+.| +||||||||+ +.|+++||+|+|||+++++...++. | +.|++|+|+||+++...++.... +..
T Consensus 120 Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~~~~---~~~ 196 (534)
T 3abg_A 120 YYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLVTTN---GEL 196 (534)
T ss_dssp EEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBCCCT---TCS
T ss_pred EEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCceeccC---CCC
Confidence 7888876 6899999995 5689999999999999876433332 3 67899999999998765543221 111
Q ss_pred CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeC-------c
Q 012467 74 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKN-------H 146 (463)
Q Consensus 74 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~-------h 146 (463)
....+|.+||||+..+ .+.|++ ++|||||||||+.+.+.|+|++ |
T Consensus 197 ~~~~gd~~lvNG~~~p---------------------------~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h 248 (534)
T 3abg_A 197 NSFWGDVIHVNGQPWP---------------------------FKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRL 248 (534)
T ss_dssp SCCCCSEEEETTEESC---------------------------BCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCC
T ss_pred ccccCceeccCCccCc---------------------------eEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCc
Confidence 1236899999999765 578888 5999999999999999999987 9
Q ss_pred eeEEEEeCCcc-cceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecC-CCC----CCCCeEEEEEeCCCCCCCCCC
Q 012467 147 KMVVVEADGNY-VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG-RKP----ATPPALTLLNYHPTSASKIPL 220 (463)
Q Consensus 147 ~~~via~DG~~-v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~-~~~----~~~~~~a~l~y~~~~~~~~~~ 220 (463)
+|+|||+||++ ++|+.++.|.|+|||||||+|++++.++.+|||++.... .+. ......++++|........+
T Consensus 249 ~~~vIa~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~- 327 (534)
T 3abg_A 249 PFKVIASDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQP- 327 (534)
T ss_dssp CEEEEEETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCS-
T ss_pred cEEEEEeCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCC-
Confidence 99999999985 589999999999999999999999843346999975321 121 11234588888643221000
Q ss_pred CCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCC
Q 012467 221 SPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAF 300 (463)
Q Consensus 221 ~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~ 300 (463)
.....|. .+.+.. .+.++...++++.+... + ..|+|||.+|..+..|.
T Consensus 328 -~~~~~P~------------~L~~~~-~p~~~~~~~~~~~~~~~----~--~~w~iNG~~f~~~~~p~------------ 375 (534)
T 3abg_A 328 -DTSVVPA------------NLRDVP-FPSPTTNTPRQFRFGRT----G--PTWTINGVAFADVQNRL------------ 375 (534)
T ss_dssp -CCCCCCC------------CCCCCS-CCCCCCCCCEEEECSCC----C--STTCCCCBTTBCTTSCC------------
T ss_pred -CCCCCcc------------ccccCC-CCCCccccceEEEEecc----C--ceeEECCcccCCCCCcc------------
Confidence 0000110 111111 01122234555544221 1 25899999986432221
Q ss_pred CCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCC-CCCCCCCCCCeeecCCceEEEeecCCCCCcc
Q 012467 301 DQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANA-IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE 379 (463)
Q Consensus 301 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~-~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~ 379 (463)
...++.|++++|+|+|.+. + .||||||||+|+||+++.|.+.
T Consensus 376 -----------------------------l~~v~~G~~~~w~i~N~~~~~------~HP~HLHG~~F~Vl~~~~g~~~-- 418 (534)
T 3abg_A 376 -----------------------------LANVPVGTVERWELINAGNGW------THPIHIHLVDFKVISRTSGNNA-- 418 (534)
T ss_dssp -----------------------------CCEECTTCEEEEEEEECSSSC------CCCEEESSCCEEEEEESSCCSS--
T ss_pred -----------------------------eeeccCCCEEEEEEEcCCCCC------CcCEEECCeeEEEEEEcCCCCc--
Confidence 1467899999999999763 4 8999999999999999766432
Q ss_pred ccccCCCCCCCccceEEeCCCcEEEEEEE-cCCceeeeecccchHhHHccceeeeeccc
Q 012467 380 DEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 380 ~~~~~n~~~p~~rDTv~v~~~g~~~irf~-adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
....++.+ .|||||.|+++++++|||+ +||||.|+|||||++|++.|||+.|.+..
T Consensus 419 -~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 475 (534)
T 3abg_A 419 -RTVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATV 475 (534)
T ss_dssp -SCCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECS
T ss_pred -CcCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEe
Confidence 11234445 8999999999999999998 99999999999999999999999996654
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=2.6e-63 Score=517.16 Aligned_cols=340 Identities=18% Similarity=0.215 Sum_probs=242.7
Q ss_pred cccccc-cceeEEEeccc----hhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHHHHhhhcC------
Q 012467 2 LDVWQV-QAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLSS------ 69 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~~~~~~~~------ 69 (463)
|+|.+. ++||||||||+ +.|+++||+|+|||+++++.+.++ .+|+|++|+|+||+++...++......
T Consensus 139 Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~ 218 (513)
T 2wsd_A 139 YHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRLKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPS 218 (513)
T ss_dssp EEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGGCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTT
T ss_pred EEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccccCCCCCCcEEEEEEeeecCCCCceeccccccccccc
Confidence 678775 79999999995 369999999999999986532222 458999999999999877655332110
Q ss_pred ---CCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCc
Q 012467 70 ---RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNH 146 (463)
Q Consensus 70 ---~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h 146 (463)
........++.+||||+..+ .+.|++ ++|||||||+|+.+.+.|+|++|
T Consensus 219 ~~~~~~~~~~~~d~~liNG~~~p---------------------------~~~v~~-~~~RlRliNa~~~~~~~~~i~~~ 270 (513)
T 2wsd_A 219 LPNPSIVPAFCGETILVNGKVWP---------------------------YLEVEP-RKYRFRVINASNTRTYNLSLDNG 270 (513)
T ss_dssp SCSSCCCSCCCCSEEEETTEESC---------------------------EEECCS-SEEEEEEEECCSSCCEEEEETTC
T ss_pred ccccccccccccceEEECCcccc---------------------------eEEecC-CEEEEEEEccCCcceEEEEECCC
Confidence 00001346899999999875 688988 58999999999999999999999
Q ss_pred -eeEEEEeCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC---CCCCeEEEEEeCCCCCCCCCCC
Q 012467 147 -KMVVVEADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP---ATPPALTLLNYHPTSASKIPLS 221 (463)
Q Consensus 147 -~~~via~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~---~~~~~~a~l~y~~~~~~~~~~~ 221 (463)
+|+|||+||+++ +|+.++.|.|+|||||||+|++++. .|+ +++......|. ......++|+|..+.....+.
T Consensus 271 ~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~-~g~-~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~- 347 (513)
T 2wsd_A 271 GDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAY-EGE-SIILANSAGCGGDVNPETDANIMQFRVTKPLAQKD- 347 (513)
T ss_dssp CCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGG-TTC-EEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCC-
T ss_pred CeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCC-CCc-EEEEEecccccccCCCCCCcceEEEEeccCcccCc-
Confidence 999999999998 8999999999999999999999873 455 33333322221 122345788887432111000
Q ss_pred CCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCC
Q 012467 222 PPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFD 301 (463)
Q Consensus 222 ~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~ 301 (463)
....|. .+......+..+...++++.+...... .+...|+|||.+|..+.
T Consensus 348 -~~~~p~------------~l~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~iNg~~~~~~~---------------- 397 (513)
T 2wsd_A 348 -ESRKPK------------YLASYPSVQHERIQNIRTLKLAGTQDE-YGRPVLLLNNKRWHDPV---------------- 397 (513)
T ss_dssp -CCCCCS------------BCSCCGGGCCCCEEEEEEEEEEEEECT-TSCEEEEETTBCTTSCC----------------
T ss_pred -cCCCCc------------cccCCCCcccCCCcceEEEEEEeecCC-CCCceEeECCccCCCcc----------------
Confidence 001111 000000001111234566665544322 24457899999874320
Q ss_pred CCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCC---CCCc
Q 012467 302 QNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEG---KFTK 378 (463)
Q Consensus 302 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g---~~~~ 378 (463)
.+.++.|++|+|+|+|.+.+ .||||||||+|+||+++.+ .|+.
T Consensus 398 ----------------------------~~~~~~g~~~~w~l~N~~~~------~HP~HlHG~~F~Vl~~~~~~~~~~~~ 443 (513)
T 2wsd_A 398 ----------------------------TETPKVGTTEIWSIINPTRG------THPIHLHLVSFRVLDRRPFDIARYQE 443 (513)
T ss_dssp ----------------------------CBCCBTTCEEEEEEEECSSS------CEEEEESSCCEEEEEEEEBCHHHHHH
T ss_pred ----------------------------cEecCCCCEEEEEEEcCCCC------CcCEeEeCceEEEEEecCcccccccc
Confidence 14568999999999998876 9999999999999998652 1211
Q ss_pred cccccCCCC---------CCCccceEEeCCCcEEEEEEEc-CCceeeeecccchHhHHccceeeeecccc
Q 012467 379 EDEKKFNLK---------NPPLKNTAVIFPYGWTALRFVA-DNPGAWAFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 379 ~~~~~~n~~---------~p~~rDTv~v~~~g~~~irf~a-dnpG~w~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
. ..+|+. ++.|||||.|+++++++|+|++ +|||.|+|||||++|++.|||+.|.+.++
T Consensus 444 ~--~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 444 S--GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp H--CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred c--ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 0 122233 3459999999999999999888 89999999999999999999999987653
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-61 Score=516.91 Aligned_cols=374 Identities=18% Similarity=0.189 Sum_probs=229.1
Q ss_pred ccccccc-ceeEEEecc----chhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHHHHhhhc-------
Q 012467 2 LDVWQVQ-AGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHEQEVGLS------- 68 (463)
Q Consensus 2 ~~~~~~~-~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~~~~~~~------- 68 (463)
|+|.+.| +|||||||| ++.|+++||+|+|||+++++...++ .+|+|++|+|+||+++...+......
T Consensus 157 Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~ 236 (612)
T 3gyr_A 157 SEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVI 236 (612)
T ss_dssp EEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEE
T ss_pred EEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCcc
Confidence 7787775 699999999 4899999999999999987644443 35899999999999876544321110
Q ss_pred --CC------CCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEE
Q 012467 69 --SR------PLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLN 140 (463)
Q Consensus 69 --~~------~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~ 140 (463)
.. .......++.++|||+..+ .+.|++ ++|||||||||+.+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~gd~~~vNG~~~p---------------------------~~~v~~-~~yRlRliNas~~~~~~ 288 (612)
T 3gyr_A 237 VQQSNPETGKPVSIPFFGPYTTVNGRIWP---------------------------YADVDD-GWYRLRLVNASNARIYN 288 (612)
T ss_dssp EESSCSSSSCCEECCCCCSEEEETTEESC---------------------------EEEEES-SEEEEEEEECCSSCCEE
T ss_pred ccccCCCCCCccccCccCceeeecCCccc---------------------------eEeccC-cEEEEEEEeccCCccee
Confidence 00 0001235788999998764 677765 68999999999999999
Q ss_pred EEEeCc-------eeEEEEeCCccc-ceeeE------eeEEecCCceEEEEEecCCCCCCce-EEEEEecCCCC------
Q 012467 141 LAVKNH-------KMVVVEADGNYV-QPFEV------DDMDIYSGESYSVLLTTNQDPSYNY-WISAGVRGRKP------ 199 (463)
Q Consensus 141 ~~i~~h-------~~~via~DG~~v-~P~~~------~~l~i~~GeR~dvlV~~~~~~~g~y-~ir~~~~~~~~------ 199 (463)
|+|++| +|+|||+||+++ +|+.+ +.|.|+|||||||||++++. .+.+ +++......+.
T Consensus 289 l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pGeRydVlV~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 367 (612)
T 3gyr_A 289 LVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRAL-GGRRLRLVDKGPGAPAGTPDPL 367 (612)
T ss_dssp EEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTC-TTCEEEEEECCTTSCTTSCBGG
T ss_pred EEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccceEEEEEEECCCC-CceEEEEEecCCcCCcCccCcc
Confidence 999998 499999999998 46655 47999999999999999984 4444 44433222221
Q ss_pred CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeec--cCCeEEEEEe
Q 012467 200 ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT--INGFTKWAIN 277 (463)
Q Consensus 200 ~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~--~~~~~~~~iN 277 (463)
......++++|.............|........... ...+ ...+...+...... ......|.+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (612)
T 3gyr_A 368 GGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMS-------------HDIP-HGHRLIVLTPPGTKGSGGHPEIWEMA 433 (612)
T ss_dssp GTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCC-------------TTSC-CEEEEEEEECTTCTTTTTCCEEEEEE
T ss_pred ccccccceeeecccCCCCCCcccccccccccccccc-------------cccc-cccccccccccccccccccccccccc
Confidence 112234555554322211111111111000000000 0000 00000100000000 0001111111
Q ss_pred cccCCCC-CCCCccccc-cCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCC
Q 012467 278 NVSLTLP-PTPYLGSIK-YGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSE 355 (463)
Q Consensus 278 g~~~~~p-~~p~l~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~ 355 (463)
....... ..+...... ....+ .+..+ ... .........+.++.|++|+|+|+|.+.+
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~----~~n-----~~~~~~~~~~~~~~g~~~~w~i~N~~~~------ 492 (612)
T 3gyr_A 434 EVEDPADVQVPAEGVIQVTGADG------RTKTY----RRT-----ARTFNDGLGFTIGEGTHEQWTFLNLSPI------ 492 (612)
T ss_dssp ECC-----CCSCTTEEEEECTTS------CEEEE----EEE-----ECSTTSCCCEEEETTCEEEEEEEECSSS------
T ss_pred cccccccccccccceeeeccCCC------ccccc----ccc-----CccCCCCcceEeCCCCEEEEEEEcCCCC------
Confidence 1110000 000000000 00000 00000 000 0000011237889999999999999877
Q ss_pred CCCeeecCCceEEEeecCCCCCcc----------------ccccCCCCCCCccceEEeCCCcEEEEEEE-cCCceeeeec
Q 012467 356 IHPWHLHGHDFWVLGRGEGKFTKE----------------DEKKFNLKNPPLKNTAVIFPYGWTALRFV-ADNPGAWAFH 418 (463)
Q Consensus 356 ~HP~HlHG~~f~vl~~g~g~~~~~----------------~~~~~n~~~p~~rDTv~v~~~g~~~irf~-adnpG~w~~H 418 (463)
.||||||||+||||+++.+.+... .....+..++.|||||.|+++++++|||+ +||||.||||
T Consensus 493 ~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~H 572 (612)
T 3gyr_A 493 LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYH 572 (612)
T ss_dssp CEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEE
T ss_pred CcCEeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEc
Confidence 999999999999999865433221 12345667889999999999999999998 8999999999
Q ss_pred ccchHhHHccceeeeeccccc
Q 012467 419 CHIEPHFHIGMGVVLALGVET 439 (463)
Q Consensus 419 CHi~~H~~~GM~~~~~~~~~~ 439 (463)
|||++|++.|||+.|.+.+.+
T Consensus 573 CHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 573 CHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp ESSHHHHHTTCEEEEEEECHH
T ss_pred CCChHHHhCcCCcceEEeCCc
Confidence 999999999999999876543
No 15
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=9.3e-61 Score=501.95 Aligned_cols=368 Identities=18% Similarity=0.190 Sum_probs=244.7
Q ss_pred cccccc-cceeEEEeccc----hhhhhcceeeEEEEeCCCCCCCCC-CCCcceEEEEeeeecccHHH------HHhh--h
Q 012467 2 LDVWQV-QAGTYFYHGHL----GMQRSAGLYGSLIVDVADGEKEPF-HYDGEFNLLLSDWWHRSVHE------QEVG--L 67 (463)
Q Consensus 2 ~~~~~~-~~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~~p~-~~d~e~~l~l~D~~~~~~~~------~~~~--~ 67 (463)
|+|.+. ++||||||||. +.|+++||+|+|||+++++...++ .+|+|++|+|+||+++...+ +... +
T Consensus 157 Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~ 236 (612)
T 2g23_A 157 SEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVI 236 (612)
T ss_dssp EEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEE
T ss_pred EEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCccccccccccccccc
Confidence 788886 69999999995 459999999999999986533222 47999999999999986432 1000 0
Q ss_pred cC---CC-CC---CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEE
Q 012467 68 SS---RP-LR---WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLN 140 (463)
Q Consensus 68 ~~---~~-~~---~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~ 140 (463)
.. .. +. ....+|.+||||+..+ .++|++| +|||||||+|+.+.+.
T Consensus 237 ~~~~~~~~g~p~~~~~~gd~~lVNG~~~p---------------------------~~~V~~g-~yRlRliNas~~r~~~ 288 (612)
T 2g23_A 237 VQQSNPETGKPVSIPFFGPYTTVNGRIWP---------------------------YADVDDG-WYRLRLVNASNARIYN 288 (612)
T ss_dssp EESSCSSSSCCEECCCCCSEEEETTEESC---------------------------EEEEESS-EEEEEEEECCSSCCEE
T ss_pred ccccccccCcccccCCcCCEEEECCccCC---------------------------eEEecCC-eEEEEEEecCCCeEEE
Confidence 00 00 00 0236899999999875 7999999 9999999999999999
Q ss_pred EEEeCc-------eeEEEEeCCccc-ceeeEe------eEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCC-----
Q 012467 141 LAVKNH-------KMVVVEADGNYV-QPFEVD------DMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT----- 201 (463)
Q Consensus 141 ~~i~~h-------~~~via~DG~~v-~P~~~~------~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~----- 201 (463)
|+|++| +|+|||+||+++ +|+.++ .|.|+|||||||||++++.++.+|+|+..........
T Consensus 289 l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~ 368 (612)
T 2g23_A 289 LVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLG 368 (612)
T ss_dssp EEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGG
T ss_pred EEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCcccccc
Confidence 999999 899999999999 599999 9999999999999999986555699987542211100
Q ss_pred ---CCeEEEEEeCCCCCCCCCCCCCCC-C-CCCCCCcccccccccccccCCC-CCCCCccceEEEEEee-----------
Q 012467 202 ---PPALTLLNYHPTSASKIPLSPPPI-T-PRWDDYDHSKSFSNKIFALMGS-PKPPTNFHRRLTLLNT----------- 264 (463)
Q Consensus 202 ---~~~~a~l~y~~~~~~~~~~~~~p~-~-p~~~~~~~~~~~~~~~~~~~~~-~~~p~~~d~~~~~~~~----------- 264 (463)
...+..+++...... .+...|. + +...................+. ........+.+.+...
T Consensus 369 ~~~~~~vm~f~V~~~~~~--~~~~~P~~L~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (612)
T 2g23_A 369 GVRYPEVMEFRVRETCEE--DSFALPEVLSGSFRRMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAE 446 (612)
T ss_dssp TBSCCEEEEEEEECCSCC--CCCCCCSSCCSSCCCCCTTSCCEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCT
T ss_pred CccccceEEEEEccCCCC--CCCCCChhhccccccCCcccccceeEEeeccccccccccccceeeccccccccccccccc
Confidence 112334444422111 1111111 0 0000000000000000000000 0000000001111100
Q ss_pred ----eeccCC-eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEE
Q 012467 265 ----QNTING-FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTV 339 (463)
Q Consensus 265 ----~~~~~~-~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 339 (463)
....+| ...|.|||..|..+ + .+.++.|++|
T Consensus 447 ~~~~~~~~~g~~~~~~iNG~~~~~~--------------------~------------------------~~~v~~G~~v 482 (612)
T 2g23_A 447 GVIQVTGADGRTKTYRRTAATFNDG--------------------L------------------------GFTIGEGTHE 482 (612)
T ss_dssp TEEEEECTTSCEEEEEEEECSTTSC--------------------C------------------------CEEEETTCEE
T ss_pred cceeeeccCCceeEEEECCccCCCC--------------------C------------------------ceEecCCCEE
Confidence 000012 24577777766311 0 1788999999
Q ss_pred EEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc----------------ccccCCCCCCCccceEEeCCCcEE
Q 012467 340 DVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE----------------DEKKFNLKNPPLKNTAVIFPYGWT 403 (463)
Q Consensus 340 ~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~----------------~~~~~n~~~p~~rDTv~v~~~g~~ 403 (463)
+|+|.|.+.+ .|||||||+.|+|++++.+.++.- .....+..++.|||||.|+||+++
T Consensus 483 ~w~l~N~~~~------~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~ 556 (612)
T 2g23_A 483 QWTFLNLSPI------LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGL 556 (612)
T ss_dssp EEEEEECSSS------CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEE
T ss_pred EEEEEeCCCC------CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEE
Confidence 9999999877 999999999999999854322100 012345556779999999999999
Q ss_pred EEEEEcC-CceeeeecccchHhHHccceeeeeccccccccCCCCCcc
Q 012467 404 ALRFVAD-NPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALA 449 (463)
Q Consensus 404 ~irf~ad-npG~w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~ 449 (463)
+|+|+++ |||.|||||||++|++.|||+.|.+.++++.++|.....
T Consensus 557 ~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~~~~~~~~~~~ 603 (612)
T 2g23_A 557 RVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEALKFDHGGAH 603 (612)
T ss_dssp EEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHHHHTTC-----
T ss_pred EEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchhhccCCCCCCC
Confidence 9999999 999999999999999999999999999999888765443
No 16
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.3e-60 Score=489.29 Aligned_cols=322 Identities=24% Similarity=0.330 Sum_probs=233.2
Q ss_pred ccccccc--ceeEEEecc----chhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhh-hcCCCCCC
Q 012467 2 LDVWQVQ--AGTYFYHGH----LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVG-LSSRPLRW 74 (463)
Q Consensus 2 ~~~~~~~--~GT~WYHsH----~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~-~~~~~~~~ 74 (463)
|+|.+.| +|||||||| ++.|+++||+|+|||+++++ .++++++++ |+|+||+++...++... ......
T Consensus 133 Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~--~~~~~~~~~-l~l~D~~~~~~g~~~~~~~~~~~~-- 207 (481)
T 3zx1_A 133 YRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKD--ALSHLKEKD-LMISDLRLDENAQIPNNNLNDWLN-- 207 (481)
T ss_dssp EEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSC--TTTTSEEEE-EEEEEECCBTTSCCCCCCHHHHHH--
T ss_pred EEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccc--cccCCCcee-EEEEEEeccCCCccccccchhhcc--
Confidence 7788776 899999999 48999999999999999865 234555665 99999999876543200 000000
Q ss_pred CCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeC
Q 012467 75 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD 154 (463)
Q Consensus 75 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~D 154 (463)
...++.+||||+..+ .++|++|+ ||||||+|+.+.+.|+|++|+|+|||+|
T Consensus 208 g~~gd~~lvNG~~~p---------------------------~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~D 258 (481)
T 3zx1_A 208 GREGEFVLINGQFKP---------------------------KIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTD 258 (481)
T ss_dssp CCCCSEEEETTEESC---------------------------EEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEET
T ss_pred CCcCCEEEECCccCc---------------------------eEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcC
Confidence 236799999999764 79999998 9999999999999999999999999999
Q ss_pred Cccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----CCCCeEEEEEeCCCCCCCCCCCCCCCCCCC
Q 012467 155 GNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKIPLSPPPITPRW 229 (463)
Q Consensus 155 G~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~ 229 (463)
|+++ +|+.++.|.|+|||||||+|++++ .+.|.|.+....... .....+.++++...... ... |.
T Consensus 259 Gg~~~~P~~~~~l~l~pgeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~l---P~- 328 (481)
T 3zx1_A 259 GGLIEKTIYKEELFLSPASRVEVLIDAPK--DGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN----VEL---PK- 328 (481)
T ss_dssp TEEEEEEEEESSEEECTTCEEEEEEECSS--CEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC----CCC---CS-
T ss_pred CCccCCceEeCeEEECCccEEEEEEEcCC--CcEEEEEEecccccCccccCCCCceeEEEEecCCCC----ccC---Cc-
Confidence 8765 899999999999999999999986 578988875433211 11223334433311110 111 11
Q ss_pred CCCcccccccccccccCCCCCCCCccceEEEEEeeeeccC-----Ce--------EEEEEecccCCCCCCCCccccccCC
Q 012467 230 DDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN-----GF--------TKWAINNVSLTLPPTPYLGSIKYGL 296 (463)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~-----~~--------~~~~iNg~~~~~p~~p~l~~~~~~~ 296 (463)
.+.+... .+.+ ..++++.+........ +. ..|+|||..|..
T Consensus 329 -----------~l~~~~~-~~~~-~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~~~------------- 382 (481)
T 3zx1_A 329 -----------NLKIFKP-SEEP-KEFKEIIMSEDHMQMHGMMGKSEGELKIALASMFLINRKSYDL------------- 382 (481)
T ss_dssp -----------CSCCCCC-CCCC-CEEEEEEEEECCSTTTTGGGCCHHHHHHHHHTTEEETTBCCCT-------------
T ss_pred -----------cccCCCC-CCCC-CcEEEEEEeccchhcccccccccccccccccceeEECCEeCCC-------------
Confidence 0111110 1111 2455555543221000 00 139999987742
Q ss_pred CCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeec-CCC
Q 012467 297 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRG-EGK 375 (463)
Q Consensus 297 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g-~g~ 375 (463)
..+ .+.++.|++|+|+|.|.+.+ .|||||||+.|+|+++. +|.
T Consensus 383 ------~~~------------------------~~~~~~G~~v~w~l~N~~~~------~Hp~HlHG~~F~vl~~~~~g~ 426 (481)
T 3zx1_A 383 ------KRI------------------------DLSSKLGVVEDWIVINKSHM------DHPFHIHGTQFELISSKLNGK 426 (481)
T ss_dssp ------TCC------------------------CEEEETTCCEEEEEEECSSS------CEEEEETTCCEEEEEEEETTE
T ss_pred ------CCc------------------------eEEeCCCCEEEEEEEcCCCC------ceeEEEeccEEEEEEecccCC
Confidence 111 17889999999999998877 99999999999999983 222
Q ss_pred CCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 376 FTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 376 ~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
. ....++.|||||.|+|+++++|+|++||||.|+||||+++|++.|||+.|.+.
T Consensus 427 ~-------~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 427 V-------QKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp E-------EECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred C-------CCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1 11234689999999999999999999999999999999999999999999764
No 17
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.8e-59 Score=480.50 Aligned_cols=329 Identities=20% Similarity=0.281 Sum_probs=229.7
Q ss_pred ccccccc-ceeEEEeccc----hhhhhcceeeEEEEeCCCCCC--CCCCC-CcceEEEEeeeecccHHHHHhhhcCCCCC
Q 012467 2 LDVWQVQ-AGTYFYHGHL----GMQRSAGLYGSLIVDVADGEK--EPFHY-DGEFNLLLSDWWHRSVHEQEVGLSSRPLR 73 (463)
Q Consensus 2 ~~~~~~~-~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~~--~p~~~-d~e~~l~l~D~~~~~~~~~~~~~~~~~~~ 73 (463)
|+|.+.| +||||||||. +.|+++||+|+|||+++++.. .|..| ++|++|+|+||+++...++..........
T Consensus 99 Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~~~~~~~~~ 178 (488)
T 3od3_A 99 VTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAA 178 (488)
T ss_dssp EEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCCCCSHHHHH
T ss_pred EEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceeccccccccc
Confidence 7788876 7999999994 789999999999999986532 23345 36999999999998765432211000000
Q ss_pred CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE-eCceeEEEE
Q 012467 74 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV-KNHKMVVVE 152 (463)
Q Consensus 74 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i-~~h~~~via 152 (463)
....+|.+||||+..+ .+.+ +|++|||||||+|+.+.+.|+| +||+|+|||
T Consensus 179 ~g~~gd~~lvNG~~~p---------------------------~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa 230 (488)
T 3od3_A 179 VGWFGDTLLTNGAIYP---------------------------QHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIA 230 (488)
T ss_dssp HCCCCSEEEETTBSSC---------------------------EEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEE
T ss_pred cCCCCCEEEEcCCcCc---------------------------cEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEE
Confidence 0236799999999865 4555 5789999999999999999999 699999999
Q ss_pred eCCccc-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----CCCCeEEEEEeCCCCCCCCCCCCCCCCC
Q 012467 153 ADGNYV-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPTSASKIPLSPPPITP 227 (463)
Q Consensus 153 ~DG~~v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----~~~~~~a~l~y~~~~~~~~~~~~~p~~p 227 (463)
+||+++ +|+.++.|.|+|||||||+|++++ .+.|+|++....... .......+++....... .....|.
T Consensus 231 ~DG~~l~~P~~~~~l~l~pGeR~dvlv~~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~P~-- 304 (488)
T 3od3_A 231 SDGGLLPEPVKVSELPVLMGERFEVLVEVND--NKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAIS--ASGALPD-- 304 (488)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEEECT--TCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEE--CCCCCCS--
T ss_pred eCCCcccCccEeceEEECCCCEEEEEEEeCC--CceEEEEEeccCCCCcccccccCccceeEecccccC--CCCCCCc--
Confidence 999986 899999999999999999999996 578999876443221 01122233333211000 0000110
Q ss_pred CCCCCcccccccccccccCCCCCCCCccceEEEEEeeee-------------------cc----------CC--------
Q 012467 228 RWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN-------------------TI----------NG-------- 270 (463)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~-------------------~~----------~~-------- 270 (463)
.|......+......++++.+.+... .+ .|
T Consensus 305 -------------~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 371 (488)
T 3od3_A 305 -------------TLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHG 371 (488)
T ss_dssp -------------CCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCC
T ss_pred -------------ccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccccccc
Confidence 00000000111122356666543100 00 01
Q ss_pred --e---EEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEe
Q 012467 271 --F---TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQN 345 (463)
Q Consensus 271 --~---~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N 345 (463)
. ..|.|||.+|... + | .+.++.|++++|.|.|
T Consensus 372 ~~~~~~~~~~ING~~~~~~-------------------~-~-----------------------~~~~~~G~~e~w~l~N 408 (488)
T 3od3_A 372 GKFDFHHANKINGQAFDMN-------------------K-P-----------------------MFAAAKGQYERWVISG 408 (488)
T ss_dssp GGGCGGGCEEETTBCCCTT-------------------C-C-----------------------SEECCBSSCEEEEEEC
T ss_pred ccccccceeeECCeeCCCC-------------------C-C-----------------------ceEcCCCCEEEEEEEe
Confidence 0 1378998877421 0 1 1788999999999999
Q ss_pred CC-CCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC----Cceeeeeccc
Q 012467 346 AN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD----NPGAWAFHCH 420 (463)
Q Consensus 346 ~~-~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad----npG~w~~HCH 420 (463)
.+ .+ .|||||||+.|+|++++..... ..++.|||||.|+ |+++.|+|+++ +||.||||||
T Consensus 409 ~~~~~------~Hp~HlHg~~F~Vl~~~g~~~~--------~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH 473 (488)
T 3od3_A 409 VGDMM------LHPFHIHGTQFRILSENGKPPA--------AHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCH 473 (488)
T ss_dssp TTCCC------CEEEEETTCCBEEEEBTTBCCC--------GGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEES
T ss_pred CCCCC------CccEEEcCceEEEeccCCCccc--------cccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCC
Confidence 87 45 8999999999999998533221 1235799999999 99999999974 5789999999
Q ss_pred chHhHHccceeeeec
Q 012467 421 IEPHFHIGMGVVLAL 435 (463)
Q Consensus 421 i~~H~~~GM~~~~~~ 435 (463)
+++|++.|||+.|.+
T Consensus 474 ~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 474 LLEHEDTGMMLGFTV 488 (488)
T ss_dssp SHHHHHTTCEEEEEC
T ss_pred chHHHhcCCcEEEEC
Confidence 999999999999864
No 18
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=2.8e-38 Score=324.66 Aligned_cols=322 Identities=15% Similarity=0.093 Sum_probs=194.1
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCCCCCC------cceEEEEeeeecccHHHHHhh--hcCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEPFHYD------GEFNLLLSDWWHRSVHEQEVG--LSSRPLR 73 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p~~~d------~e~~l~l~D~~~~~~~~~~~~--~~~~~~~ 73 (463)
|+|.+.++||||||||...|+.+||+|.|||+++.......+++ .+++..+ |+.......+... .......
T Consensus 100 ~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l~~~~~~~~~~ 178 (447)
T 2dv6_A 100 FSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDLETVEVKGQLD 178 (447)
T ss_dssp EEEECCSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEEEEEEEEEEEE
T ss_pred EEEEcCCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEEEEEEEEEecc
Confidence 56777889999999999899999999999999876421110110 1111111 1111000000000 0000000
Q ss_pred CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCc-ceEEEEEEeCceeEEEE
Q 012467 74 WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTA-LASLNLAVKNHKMVVVE 152 (463)
Q Consensus 74 ~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~-~~~~~~~i~~h~~~via 152 (463)
-....+..++||+.. .++|++++|++|||||+|++. ...+.++++| + ++
T Consensus 179 ~g~~~~~~~~NG~~p--------------------------gp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg--~--~~ 228 (447)
T 2dv6_A 179 DNTTYTYWTFNGKVP--------------------------GPFLRVRVGDTVELHLKNHKDSLMVHSVDFHG--A--TG 228 (447)
T ss_dssp TTEEEEEEEETTBBS--------------------------CCCEEEETTCEEEEEEEECTTCSSCBCCEETT--C--CS
T ss_pred CCceeEEEEECCccC--------------------------CCeEEecCCCEEEEEEEeCCCCceeEEEeecc--c--cC
Confidence 001235677888741 147999999999999999985 2345555555 3 36
Q ss_pred eCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC-CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCC
Q 012467 153 ADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP-ATPPALTLLNYHPTSASKIPLSPPPITPRWDD 231 (463)
Q Consensus 153 ~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~-~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~ 231 (463)
.||.+ +.+.|.|||||++++++++ +|+||++........ ......+.|.|.+... . |..+.
T Consensus 229 ~DG~~------~~~~i~pG~~~~~~~~~~~--~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~-------~---P~~d~ 290 (447)
T 2dv6_A 229 PGGAA------AFTQTDPGEETVVTFKALI--PGIYVYHCATPSVPTHITNGMYGLLLVEPEGG-------L---PQVDR 290 (447)
T ss_dssp GGGGG------GGCCBCTTCEEEEEEECCS--CEEEEEECCSSSHHHHHHTTCEEEEEEECTTC-------S---CCCSE
T ss_pred CCCCC------ccEEeCCCCEEEEEEECCC--CeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC-------C---CCCCe
Confidence 79874 2346999999999999986 589999876421000 1123467777763210 1 11110
Q ss_pred CcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCC
Q 012467 232 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSN 311 (463)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~ 311 (463)
.....+..... .... .......+............|.|||..+....
T Consensus 291 -----~~~~~~~~~~~-~~~~-~~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~~-------------------------- 337 (447)
T 2dv6_A 291 -----EFYVMQGEIYT-VKSF-GTSGEQEMDYEKLINEKPEYFLFNGSVGSLTR-------------------------- 337 (447)
T ss_dssp -----EEEEEEEEECB-SSCT-TCCEECCBBHHHHHTTCCSEEEETTSTTCCCC--------------------------
T ss_pred -----eEEEEeccccc-CCcc-cccccccCChHHhhccCCCEEEECCcccCCCC--------------------------
Confidence 00000000000 0000 00000000000000011235788887653110
Q ss_pred CcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC-
Q 012467 312 EYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP- 390 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~- 390 (463)
..++.++.|++++|+|.|.+.. ..||||||||+|+||+.+ |.+. .+|.
T Consensus 338 ----------------~~~~~v~~g~~vrlrliN~~~~-----~~h~~hlhGh~f~vv~~d-G~~~---------~~p~~ 386 (447)
T 2dv6_A 338 ----------------SHPLYASVGETVRIFFGVGGPN-----FTSSFHVIGEIFDHVYSL-GSVV---------SPPLI 386 (447)
T ss_dssp ----------------CCCEEECTTCEEEEEEEEEESS-----CCEEEEEETCCEEEECGG-GCSS---------SCCEE
T ss_pred ----------------CcceEECCCCEEEEEEEeCCCC-----ceEeEEEcCcEEEEEEcC-Cccc---------CCCcc
Confidence 0138899999999999998642 189999999999999984 4331 2344
Q ss_pred ccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 391 LKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 391 ~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
+|||+.|++|++++|+|+++|||.|+||||+++|++.||+++|.+.
T Consensus 387 ~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~ 432 (447)
T 2dv6_A 387 GVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVD 432 (447)
T ss_dssp EESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEEC
T ss_pred cccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEe
Confidence 6999999999999999999999999999999999999999998654
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=2.8e-36 Score=337.02 Aligned_cols=325 Identities=17% Similarity=0.219 Sum_probs=200.5
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCCCCCCC-CCCCcceEEEE----eeeecccHHHHHhhhcCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVADGEKEP-FHYDGEFNLLL----SDWWHRSVHEQEVGLSSRPLRWIG 76 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~~~~~p-~~~d~e~~l~l----~D~~~~~~~~~~~~~~~~~~~~~~ 76 (463)
|+|.+.++||||||||++.|+.+||+|+|||++......+ ++||.|++++| +||++....++...+......
T Consensus 685 ~~~~~~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~--- 761 (1065)
T 2j5w_A 685 LHMWPDTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQ--- 761 (1065)
T ss_dssp EEECCCSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTC---
T ss_pred EEEecCCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCcc---
Confidence 6788889999999999999999999999999988543333 67899999999 899998876654333211111
Q ss_pred CCCeEEECCCCCCCCc-----cccccCCCCccc--cccC--CCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCce
Q 012467 77 EPQTLLINGRGQFNCS-----LAAHFSNGSAEQ--CKLR--GNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHK 147 (463)
Q Consensus 77 ~~d~~liNG~~~~~~~-----~~~~~~~~~~~~--c~~~--~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~ 147 (463)
.+.++++|+....-.. ....|++.+... .... ..-+...++|.+++|+++|+|++|... ..+.++. |.
T Consensus 762 ~p~~~~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~--HG 838 (1065)
T 2j5w_A 762 NVSNAFLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHA--HG 838 (1065)
T ss_dssp CCCCTTTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEE--SS
T ss_pred CccceeecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEee--cc
Confidence 1445555653221000 000111111000 0000 001233478999999999999999954 4444444 44
Q ss_pred eEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCC--------CCceEEEEEecCCCCCCCCeEEEEEeCCCCCCCCC
Q 012467 148 MVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDP--------SYNYWISAGVRGRKPATPPALTLLNYHPTSASKIP 219 (463)
Q Consensus 148 ~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~--------~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~~~~ 219 (463)
+++...++ ..+.||++++..+.+.+.. .|.||................+.|.+...... .
T Consensus 839 l~~~~~~~----------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q~~~GL~G~liV~~~~~l--~ 906 (1065)
T 2j5w_A 839 VQTESSTV----------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKDLYSGLIGPLIVCRRPYL--K 906 (1065)
T ss_dssp CBCSCSCC----------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHHHHTTCEEEEEEECCC-----
T ss_pred ccccCCCC----------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHhhhccccceeEecCcccc--c
Confidence 55443321 2567999987777765421 25788865422100001223344444321100 0
Q ss_pred CCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeee-ec---------------------------cCCe
Q 012467 220 LSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQ-NT---------------------------INGF 271 (463)
Q Consensus 220 ~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~-~~---------------------------~~~~ 271 (463)
+ ..++ .+.++.+.+.. .. ....
T Consensus 907 ----~------------------------~~~~--~d~D~~l~~~~~d~~~~~y~~~n~~~~~~~P~~v~~~~~~~~~~~ 956 (1065)
T 2j5w_A 907 ----V------------------------FNPR--RKLEFALLFLVFDENESWYLDDNIKTYSDHPEKVNKDDEEFIESN 956 (1065)
T ss_dssp ------------------------------CCC--CEEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHT
T ss_pred ----c------------------------cCCC--cceEEEEEEEeecCCcceeeccCcccccCCccccCcchhhhhccC
Confidence 0 0000 11112111110 00 0000
Q ss_pred EEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCC
Q 012467 272 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 351 (463)
Q Consensus 272 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~ 351 (463)
..|.|||..|.. ...+.++.|++|+|+|.|.+..
T Consensus 957 ~~~~iNG~~~~~--------------------------------------------~~~~~v~~G~~vr~~l~N~g~~-- 990 (1065)
T 2j5w_A 957 KMHAINGRMFGN--------------------------------------------LQGLTMHVGDEVNWYLMGMGNE-- 990 (1065)
T ss_dssp EEEEETTBCTTC--------------------------------------------CCCCEEETTCEEEEEEEECCST--
T ss_pred ceEEECCccCCC--------------------------------------------CccEEeCCCCEEEEEEEeCCCC--
Confidence 124444443310 1137889999999999997521
Q ss_pred CCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHcccee
Q 012467 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 431 (463)
Q Consensus 352 ~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~ 431 (463)
.+.||||||||.|+|++++ |.+||||.|++|++++|+|+++|||.|+||||+++|++.|||+
T Consensus 991 --~~~HpfHlHG~~F~vv~~~----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~ 1052 (1065)
T 2j5w_A 991 --IDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMET 1052 (1065)
T ss_dssp --TCCEEEEESSCCEEETTTT----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEE
T ss_pred --CcceeEEEcccEEEEEecC----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcE
Confidence 1289999999999999763 4799999999999999999999999999999999999999999
Q ss_pred eeecccc
Q 012467 432 VLALGVE 438 (463)
Q Consensus 432 ~~~~~~~ 438 (463)
+|.+...
T Consensus 1053 ~~~V~~~ 1059 (1065)
T 2j5w_A 1053 TYTVLQN 1059 (1065)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9987654
No 20
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.3e-36 Score=325.10 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=106.6
Q ss_pred cceeEEEeccchh--hhhcceeeEEEEeCCCCCCCCCCC-CcceEEEEee------eecccHHHHHhhhcCCCCCCCCCC
Q 012467 8 QAGTYFYHGHLGM--QRSAGLYGSLIVDVADGEKEPFHY-DGEFNLLLSD------WWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 8 ~~GT~WYHsH~~~--q~~~Gl~G~lIV~~~~~~~~p~~~-d~e~~l~l~D------~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+||||||||... |+.+||+|+|||+++.+....... .+|++|++++ |+++........+.... +....
T Consensus 153 ~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~~~~~~~~~--~~~~~ 230 (742)
T 2r7e_A 153 LCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSLMQDRDAAS--ARAWP 230 (742)
T ss_dssp SSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC-------CCS--CCCCC
T ss_pred CcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccccccCCCcc--ccccC
Confidence 5799999999655 899999999999998652111111 3888888864 54443221111111111 12345
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcce-EEEEEEeCceeEEEEeCCcc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~ 157 (463)
+..+|||+... . .+.++|++|++|||||||+++.. .+.|+|+||.|+|++.
T Consensus 231 ~~~~ING~~~~--~----------------------~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg~---- 282 (742)
T 2r7e_A 231 KMHTVNGYVNR--S----------------------LPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRNH---- 282 (742)
T ss_dssp CCCEETTBCTB--C----------------------CCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETTE----
T ss_pred ceEEECCccCC--C----------------------CcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEeE----
Confidence 67899998642 1 13589999999999999999875 7899999999999842
Q ss_pred cceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 158 VQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 158 v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
.+|++.|.|||+++|++++++ +|.|.+...
T Consensus 283 ----~~Dtv~v~Pg~~~~v~~~~~~--pG~w~~hCH 312 (742)
T 2r7e_A 283 ----RQASLEISPITFLTAQTLLMD--LGQFLLFCH 312 (742)
T ss_dssp ----ECCSCCCCTTCCCEEEECCCS--CSEECCCCC
T ss_pred ----ecceEEeCCCcEEEEEEEeCC--CeeEEEEeC
Confidence 367888999999999999986 577766544
No 21
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=8e-33 Score=309.17 Aligned_cols=357 Identities=13% Similarity=0.122 Sum_probs=210.6
Q ss_pred ccccccc----------ceeEEEeccchh--hhhcceeeEEEEeCCCCCCC--CCCCCcceEEEEe------eeecccHH
Q 012467 2 LDVWQVQ----------AGTYFYHGHLGM--QRSAGLYGSLIVDVADGEKE--PFHYDGEFNLLLS------DWWHRSVH 61 (463)
Q Consensus 2 ~~~~~~~----------~GT~WYHsH~~~--q~~~Gl~G~lIV~~~~~~~~--p~~~d~e~~l~l~------D~~~~~~~ 61 (463)
|+|.+.+ +||||||||+.. |+++||+|+|||++++.... +..+|+|++|+|+ ||++....
T Consensus 157 Y~f~~~~~~gp~~~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~ 236 (1065)
T 2j5w_A 157 YMLLATEEQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNI 236 (1065)
T ss_dssp EEEECCSTTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHH
T ss_pred EEEEeccccCCccCCCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchh
Confidence 6777776 599999999665 46899999999999875332 3456899999999 56655332
Q ss_pred HHHh-h--hcC-CCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcc-
Q 012467 62 EQEV-G--LSS-RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL- 136 (463)
Q Consensus 62 ~~~~-~--~~~-~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~- 136 (463)
.... . ... ....+...++..+|||+... . .+.++|++|++|||||||+|..
T Consensus 237 ~~~~~~p~~~~~~~~~~~~~~~~~~iNG~~~~--~----------------------~~~l~v~~Ge~vRlRliNag~~~ 292 (1065)
T 2j5w_A 237 KTYCSEPEKVDKDNEDFQQSNRMYSVNGYTFG--S----------------------LSGLSMCAEDRVKWYLFGMGNEV 292 (1065)
T ss_dssp HHHCSCGGGCCTTCHHHHHHTEEEEETTEETT--C----------------------CCCCEEETTCEEEEEEEECSSTT
T ss_pred hhhhcCccccccccccccccCcEEEECCccCC--C----------------------CcceEECCCCEEEEEEEcCCccc
Confidence 2110 0 000 00000012457899998742 1 1368899999999999999986
Q ss_pred eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCCCC
Q 012467 137 ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSAS 216 (463)
Q Consensus 137 ~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~~~ 216 (463)
..+.|+|+||+|+ ++|..+++|.|+|||||||+|++++ +|+|+|+....... .....+.++|.+....
T Consensus 293 ~~~~~~i~Gh~f~--------v~p~~~dtv~I~pGer~dVlv~~~~--pG~y~i~~h~~~h~--~~Gm~~~~~V~~~~~~ 360 (1065)
T 2j5w_A 293 DVHAAFFHGQALT--------NKNYRIDTINLFPATLFDAYMVAQN--PGEWMLSCQNLNHL--KAGLQAFFQVQECNKS 360 (1065)
T ss_dssp CCEEEEETTCCEE--------ETTEEESEEEECBTCEEEEEEECCS--CEEEEEEECSHHHH--HTTCEEEEEEECSCCC
T ss_pred ceeEEEEcCCEEE--------ECCeeecEEEECCCcEEEEEEEeCC--CeeEEEEecCcchh--hCCCEEEEEEecCCCc
Confidence 6899999999999 4678999999999999999999987 58999988654221 2346788888743221
Q ss_pred CCCCCCCCCCCC-CCCCcccccccccccccCC-----CCCCCCccceEEEEEeeeeccCCeEEEEEecccCCCCCCCCcc
Q 012467 217 KIPLSPPPITPR-WDDYDHSKSFSNKIFALMG-----SPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLG 290 (463)
Q Consensus 217 ~~~~~~~p~~p~-~~~~~~~~~~~~~~~~~~~-----~~~~p~~~d~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~ 290 (463)
++.+.|..+. +.-.....+..-++.+... ....+......+.|.......++..+-.++ ..+..
T Consensus 361 --~~~~~~~g~~~~~~~i~A~e~~wdy~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~ig~~y~k~v~-~~y~d------- 430 (1065)
T 2j5w_A 361 --SSKDNIRGKHVRHYYIAAEEIIWNYAPSGIDIFTKENLTAPGSDSAVFFEQGTTRIGGSYKKLVY-REYTD------- 430 (1065)
T ss_dssp --CCCCCCTTSEEEEEEEEEEEEEEESCTTSBCTTTCCBTTCTTCTTHHHHCCBTTBCCSEEEEEEE-EEESS-------
T ss_pred --cccccccccceeEEEEeceecccccCCCCcccccccccCCCcccchhhhccCCcccCceEeeeee-ecccC-------
Confidence 1111111100 0000000000000110000 000111101111111111122333444444 33321
Q ss_pred ccccCCCCCCCCC--CCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEE
Q 012467 291 SIKYGLKDAFDQN--GPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWV 368 (463)
Q Consensus 291 ~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~v 368 (463)
+.|..+ ++|. +.. .-.-.+++.++.|++++++|+|.... .|+||+||+.|++
T Consensus 431 -------~~f~~~~~~~~~---~~~----------~g~lgpvi~a~~gd~i~i~f~N~~~~------~~s~h~hG~~f~~ 484 (1065)
T 2j5w_A 431 -------ASFTNRKERGPE---EEH----------LGILGPVIWAEVGDTIRVTFHNKGAY------PLSIEPIGVRFNK 484 (1065)
T ss_dssp -------TTCCSBCCCCGG---GGG----------GTTSCCCEEEETTEEEEEEEEECSSS------CBCCEEESSBCCG
T ss_pred -------CceEEcCcCCcc---ccc----------ccccCceEEEeCCCEEEEEEEECCCC------CccCcccceeeec
Confidence 111000 0000 000 00012469999999999999998876 8999999999999
Q ss_pred EeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC---Cce-------eeeecccchHhHH--ccceeeee
Q 012467 369 LGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD---NPG-------AWAFHCHIEPHFH--IGMGVVLA 434 (463)
Q Consensus 369 l~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad---npG-------~w~~HCHi~~H~~--~GM~~~~~ 434 (463)
++.|. .+... . ....+...++...|.||+..+.+.... .|| .|+||+|+..=.| .|+.+.++
T Consensus 485 ~~~g~-~~~~~-~--~~~~~~~~~~~~~v~Pg~~~~y~w~v~~~~~p~~~dp~c~~~~y~s~vd~~~d~~sGLiGpll 558 (1065)
T 2j5w_A 485 NNEGT-YYSPN-Y--NPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKMYYSAVDPTKDIFTGLIGPMK 558 (1065)
T ss_dssp GGCSB-CCBCC----------CCCCSSCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECBSSHHHHHHHTCEEEEE
T ss_pred cCCCc-ccccc-c--ccccCCccCCCcccCCCCcEEEEEEccCCcCCCCCCCCeeEEEEeccCCcccccccccccceE
Confidence 88753 22100 0 000112245666778899777777643 355 8999999887655 78887775
No 22
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.97 E-value=1.3e-32 Score=270.25 Aligned_cols=181 Identities=20% Similarity=0.285 Sum_probs=145.7
Q ss_pred cccccccceeEEEeccc---hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHH----hhhcCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHL---GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE----VGLSSRPLRW 74 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~---~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~----~~~~~~~~~~ 74 (463)
|+|.+.|+||||||||. +.|+.+||+|+|||++++. .| .+|+|++|+++||+++...... ..+....
T Consensus 121 y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~--~p-~~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~--- 194 (327)
T 1kbv_A 121 FSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG--LP-KVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAV--- 194 (327)
T ss_dssp EEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH---
T ss_pred EEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC--CC-CCceEEEEEeeeeeccCccccccccccChhHhc---
Confidence 67888999999999994 7899999999999998743 23 5899999999999987531100 0000000
Q ss_pred CCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeC
Q 012467 75 IGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEAD 154 (463)
Q Consensus 75 ~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~D 154 (463)
...++.++|||+..+.|. | +.+++++|++|||||||+|....+.|+|+||+|+||+.|
T Consensus 195 ~~~~~~~~iNG~~~~~~~------------~----------~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~D 252 (327)
T 1kbv_A 195 AEQPEYVVFNGHVGALTG------------D----------NALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVE 252 (327)
T ss_dssp HTCCSEEEETTSTTTTSG------------G----------GCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGG
T ss_pred cCCCceEEEcCcccCCCC------------c----------eeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcC
Confidence 135789999999886321 1 368999999999999999998999999999999999999
Q ss_pred CcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 155 GNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 155 G~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
|++++|..++++.|+||||+||+|++++ +|+|+|+......+ .....+|+|+|++.
T Consensus 253 G~~~~p~~~d~l~l~pGer~dv~v~~~~--pG~y~l~~h~~~~~-~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 253 GGKLINENVQSTIVPAGGSAIVEFKVDI--PGNYTLVDHSIFRA-FNKGALGQLKVEGA 308 (327)
T ss_dssp GSSCEECSBSEEEECTTEEEEEEEEECS--CEEEEEEESSTHHH-HHSSCEEEEEEESC
T ss_pred CCcCCCCceeEEEECCCCEEEEEEEeCC--CeEEEEEecccccc-ccCCcEEEEEECCC
Confidence 9999999999999999999999999996 58999998654331 12346899999854
No 23
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.97 E-value=8.9e-30 Score=248.72 Aligned_cols=180 Identities=21% Similarity=0.296 Sum_probs=140.3
Q ss_pred cccccccceeEEEeccchhhh---hcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQR---SAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~---~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+.++||||||||...|. .+||+|+|||++++..+.+..+|+|++|+|+||+++...+. ...+.. ...+
T Consensus 90 y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~~~d~e~~l~l~dw~~~~~~~~----~~~~~~-~~~~ 164 (318)
T 3g5w_A 90 YKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEKTVTKDYILMLSDWVSSWANKP----GEGGIP-GDVF 164 (318)
T ss_dssp EEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHHTCCEEEEEEEEEECGGGTTCT----TCCCCT-TCCC
T ss_pred EEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccccccceeEEEEEeecccccccc----ccCCCC-CCcC
Confidence 778889999999999976554 58999999999875422223579999999999998653211 111111 2357
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
+..+|||+..++. ..++|++|++|||||+|++.. .+.|+|+||.|+||+.||.++
T Consensus 165 d~~~ING~~~~~~------------------------~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~ 219 (318)
T 3g5w_A 165 DYYTINAKSFPET------------------------QPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPL 219 (318)
T ss_dssp CEEEETTBCBTSS------------------------CCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEE
T ss_pred cEEEEcCcCCCCC------------------------ccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCccc
Confidence 8999999986511 148999999999999999965 689999999999999999998
Q ss_pred -ceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCC----CCCeEEEEEeCCC
Q 012467 159 -QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPA----TPPALTLLNYHPT 213 (463)
Q Consensus 159 -~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~----~~~~~a~l~y~~~ 213 (463)
+|...|++.|+||||+||++++++ +|.|.+.-....-... .....++|+|++.
T Consensus 220 ~~p~~~dtv~l~pger~~v~~~a~~--pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 220 DKPIKGDTVLIGPGERYDVILNMDN--PGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EEEEEESEEEECTTCEEEEEEECCS--CSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred CCCccccEEEECCCCEEEEEEECCC--CeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 799999999999999999999986 6898887654322211 1345789999864
No 24
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=2e-28 Score=241.65 Aligned_cols=180 Identities=18% Similarity=0.319 Sum_probs=139.2
Q ss_pred cccccccceeEEEeccchh--hhh-cceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGM--QRS-AGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~--q~~-~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+.++||||||||... |+. +||+|+|||++++....+..+|+|++|+|+||++...... . ..+.. ...+
T Consensus 91 y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~~~~d~e~~l~l~d~~~~~~~~~--~--~~g~~-~~~~ 165 (339)
T 2zwn_A 91 YKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIEKRVTKDVIMMMSTWESAVADKY--G--EGGTP-MNVA 165 (339)
T ss_dssp EEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTGGGCSEEEEEEEEEECGGGTTCT--T--CCCST-TSCC
T ss_pred EEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCCCcccccccCCceEEEEeeheeccccccc--C--CCCCC-cccc
Confidence 6788889999999999655 888 9999999999876532233468999999999987432110 0 01111 1257
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
+.++|||+..+. ...++|++|++|||||+|++. ..+.|+|+||+|+||+.||.++
T Consensus 166 ~~~~ING~~~~~------------------------~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~DG~~~ 220 (339)
T 2zwn_A 166 DYFSVNAKSFPL------------------------TQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDGLPL 220 (339)
T ss_dssp CEEEETTBCTTS------------------------SCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEETTEEE
T ss_pred ceEEEccccCCC------------------------cccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEEeCCeec
Confidence 899999987641 125899999999999999995 4899999999999999999999
Q ss_pred c-eeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCC----CCCCeEEEEEeCCC
Q 012467 159 Q-PFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKP----ATPPALTLLNYHPT 213 (463)
Q Consensus 159 ~-P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~----~~~~~~a~l~y~~~ 213 (463)
+ |..+|++.|+||||+||+|++++ +|.|+++.....-+. ......++|+|++.
T Consensus 221 ~~p~~~dtv~l~pg~r~~v~~~~~~--pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 221 DSPYYADTVLVSPGERYDVIIEADN--PGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEEEEESEEEECTTCEEEEEEECCS--CSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred CCCcEEEEEEECCCCEEEEEEEeCC--CeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 6 88999999999999999999986 588888776443211 22345799999864
No 25
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=6.7e-29 Score=245.06 Aligned_cols=217 Identities=22% Similarity=0.315 Sum_probs=150.4
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEe---CCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~---DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|+|++++|+++|+||+|.... ..+|+.|-+++++. ||++. ++...|+|||||++.+++++ .|+||.+.
T Consensus 35 P~I~v~~Gd~v~v~v~N~l~~---~~siH~HG~~~~~~~~~DGvp~----vtq~~I~PG~~~~y~f~~~~--~Gt~wyH~ 105 (339)
T 2zwn_A 35 PLIHVQEGDDVIVNVTNNTSL---PHTIHWHGVHQKGTWRSDGVPG----VTQQPIEAGDSYTYKFKADR--IGTLWYHC 105 (339)
T ss_dssp CEEEEETTCEEEEEEEEESSS---CBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEEC
T ss_pred CeEEEECCCEEEEEEEECCCC---CccEEeCCCCcCCCcccCCCCc----cccCccCCCCeEEEEEECCC--CEEEEEEe
Confidence 489999999999999999854 35777788888875 99874 34467999999999999975 79999987
Q ss_pred EecCCCCCC-CCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeee-----
Q 012467 193 GVRGRKPAT-PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQN----- 266 (463)
Q Consensus 193 ~~~~~~~~~-~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~----- 266 (463)
......... ....+.+.+++.... + .+ ...++++.+.+...
T Consensus 106 H~~~~~q~~~~Gl~G~liV~p~~~~-------~-~~-------------------------~~~d~e~~l~l~d~~~~~~ 152 (339)
T 2zwn_A 106 HVNVNEHVGVRGMWGPLIVDPKQPL-------P-IE-------------------------KRVTKDVIMMMSTWESAVA 152 (339)
T ss_dssp CSSHHHHTTTSCCEEEEEEECSSCC-------T-TG-------------------------GGCSEEEEEEEEEECGGGT
T ss_pred cCCchhhhhcCCceEeEEecCCCcc-------c-cc-------------------------ccCCceEEEEeeheecccc
Confidence 542210011 222333333321100 0 00 00112222211100
Q ss_pred --------ccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCE
Q 012467 267 --------TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 338 (463)
Q Consensus 267 --------~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (463)
.......|.|||..+.. ...+.++.|++
T Consensus 153 ~~~~~~g~~~~~~~~~~ING~~~~~--------------------------------------------~~~~~v~~G~~ 188 (339)
T 2zwn_A 153 DKYGEGGTPMNVADYFSVNAKSFPL--------------------------------------------TQPLRVKKGDV 188 (339)
T ss_dssp TCTTCCCSTTSCCCEEEETTBCTTS--------------------------------------------SCCEEECTTCE
T ss_pred cccCCCCCCccccceEEEccccCCC--------------------------------------------cccEEECCCCE
Confidence 00011246666654310 01278899999
Q ss_pred EEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeec
Q 012467 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFH 418 (463)
Q Consensus 339 v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~H 418 (463)
++|+|.|.+.. .||||||||+|+|++.. |.. +.+|.++||+.|++|+++.|+|+++|||.|++|
T Consensus 189 vrlrliN~~~~------~h~~hlhGh~f~vi~~D-G~~---------~~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~h 252 (339)
T 2zwn_A 189 VKIRFFGAGGG------IHAMHSHGHDMLVTHKD-GLP---------LDSPYYADTVLVSPGERYDVIIEADNPGRFIFH 252 (339)
T ss_dssp EEEEEEECSSS------CEEEEETTCCEEEEEET-TEE---------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEE
T ss_pred EEEEEEeCCCc------eEEEEECCcEEEEEEeC-Cee---------cCCCcEEEEEEECCCCEEEEEEEeCCCeeEEEE
Confidence 99999999866 89999999999999983 321 123678999999999999999999999999999
Q ss_pred ccchHh------HHccceeeee
Q 012467 419 CHIEPH------FHIGMGVVLA 434 (463)
Q Consensus 419 CHi~~H------~~~GM~~~~~ 434 (463)
||+++| +..||++++.
T Consensus 253 ch~~~H~~~~~~~~~gm~a~l~ 274 (339)
T 2zwn_A 253 DHVDTHVTAGGKHPGGPITVIE 274 (339)
T ss_dssp ECCGGGSCBTTBSSCSSEEEEE
T ss_pred EechhhcccccccCCCcEEEEE
Confidence 999999 7889988884
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.96 E-value=1.8e-29 Score=258.70 Aligned_cols=184 Identities=18% Similarity=0.256 Sum_probs=145.5
Q ss_pred cccccccceeEEEecc---chhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHH-hh-hcCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGH---LGMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQE-VG-LSSRPLRWIG 76 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH---~~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~-~~-~~~~~~~~~~ 76 (463)
|+|.+.++|||||||| +..|+.+||+|+|||++++. .| .||+|++|+|+||++....... .. +...... ..
T Consensus 111 y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~--~~-~~d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~-~~ 186 (442)
T 2zoo_A 111 FNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG--LA-PVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAI-DE 186 (442)
T ss_dssp EEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC--CC-CCSEEEEEEEEEECBSSCTTCCEEECBCHHHHH-TT
T ss_pred EEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC--CC-CCCceEEEEeeeeeccCcccccccccCChhHhc-cC
Confidence 6788899999999996 68999999999999997753 23 6899999999999987642100 00 0000000 24
Q ss_pred CCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCc
Q 012467 77 EPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGN 156 (463)
Q Consensus 77 ~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~ 156 (463)
.++.+||||+.... ...+.|.+++|++|||||+|+|....+.|+|+||+|+||+.||+
T Consensus 187 ~~~~~liNG~~~~~----------------------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~ 244 (442)
T 2zoo_A 187 DADYVVFNGSVGST----------------------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGG 244 (442)
T ss_dssp CCSEEEETTSTTTT----------------------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGS
T ss_pred CCCEEEECCCcCCC----------------------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCc
Confidence 67999999997531 01136899999999999999999899999999999999999999
Q ss_pred ccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCCC
Q 012467 157 YVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTS 214 (463)
Q Consensus 157 ~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~~ 214 (463)
+++|..++++.|+||||+||+|++++ +|+|+++....... ......++|+|.+..
T Consensus 245 ~~~p~~~~~~~l~pg~r~~v~v~~~~--~G~y~~~~~~~~~~-~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 245 SLKNHNVQTTLIPAGGAAIVEFKVEV--PGTFILVDHSIFRA-FNKGALAMLKVEGPD 299 (442)
T ss_dssp SCEECSBSEEEECTTEEEEEEEECCS--CEEEEEEESSTHHH-HTTSCEEEEEEESCC
T ss_pred cCCCccceEEEECCCeeEEEEEEcCC--CCeEEEEecccccc-cccCceEEEEecCCC
Confidence 99999999999999999999999996 58999988643321 134568999998644
No 27
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=1.4e-28 Score=242.57 Aligned_cols=223 Identities=18% Similarity=0.298 Sum_probs=151.9
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCC-----------
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD----------- 183 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~----------- 183 (463)
.|+|++++|+++|+||+|.... .+.|+.+|..+. ++.||+++ +...|.|||+++..+++++.
T Consensus 76 GP~I~v~~Gd~v~v~~~N~l~~-~~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~ 148 (343)
T 3cg8_A 76 GPLIEVNEGDTLHIEFTNTMDV-RASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPG 148 (343)
T ss_dssp CCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEECC
T ss_pred CCEEEEECCCEEEEEEEECCCC-CeeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCCC
Confidence 3689999999999999999954 445777777666 78999985 24568999999999998752
Q ss_pred CCCceEEEEEecCCC---CC---CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccce
Q 012467 184 PSYNYWISAGVRGRK---PA---TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHR 257 (463)
Q Consensus 184 ~~g~y~ir~~~~~~~---~~---~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~ 257 (463)
..|.||......... .+ ...+..+++..+. .. .|+
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~------------------------------------~~---pd~ 189 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD------------------------------------VL---PDA 189 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC------------------------------------CC---CSE
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCCC------------------------------------CC---CCc
Confidence 124555543221110 00 1112222322100 00 145
Q ss_pred EEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCC
Q 012467 258 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337 (463)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (463)
++.+.+. .|.|||..+.. .+ .+.++.|+
T Consensus 190 e~~l~~~--------d~~iNG~~~~~--------------------~~------------------------~l~v~~Ge 217 (343)
T 3cg8_A 190 THTIVFN--------DMTINNRKPHT--------------------GP------------------------DFEATVGD 217 (343)
T ss_dssp EEEEEEE--------TTEETTCCTTC--------------------CC------------------------CEEEETTC
T ss_pred eEEEEcc--------cceecccCCCC--------------------Cc------------------------cEEeCCCC
Confidence 5554432 37899876410 00 28899999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc---CCcee
Q 012467 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA---DNPGA 414 (463)
Q Consensus 338 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a---dnpG~ 414 (463)
+|+|+|.|.+.+ .||||||||.|+|+. .|.+.. ....+.++||+.|+||+++.|+|++ +|||.
T Consensus 218 ~vri~l~N~g~~------~HpfHlHGh~f~v~~--~G~~~~------p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~ 283 (343)
T 3cg8_A 218 RVEIVMITHGEY------YHTFHMHGHRWADNR--TGILTG------PDDPSRVIDNKITGPADSFGFQIIAGEGVGAGA 283 (343)
T ss_dssp EEEEEEEEESSC------CEEEEETTCCEESSS--SSSCCS------TTCCCCEESEEEECTTCEEEEEEETTTTTCSEE
T ss_pred EEEEEEEcCCcc------ccccEecCcEEEEec--cCcccC------CCCcccceeeEEeCCCCEEEEEEEECCCCCCee
Confidence 999999998876 999999999999974 343321 0123578999999999999999995 89999
Q ss_pred eeecccchHhHHccceeeeeccccccccCCCCCccc
Q 012467 415 WAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALAC 450 (463)
Q Consensus 415 w~~HCHi~~H~~~GM~~~~~~~~~~~~~~P~~~~~C 450 (463)
|+||||+++|++.||+++|.+...+ ..+|...+.|
T Consensus 284 w~~HCHi~~H~~~GM~g~~~V~~~~-~~~P~y~~~~ 318 (343)
T 3cg8_A 284 WMYHCHVQSHSDMGMVGLFLVKKPD-GTIPGYEPHE 318 (343)
T ss_dssp EEEEECSHHHHHTTCEEEEEEECTT-SCCSCC----
T ss_pred EEEeCCCHHHHhccCcEEEEEecCC-CCCCCCCCCC
Confidence 9999999999999999999876532 2344443433
No 28
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.95 E-value=4.7e-28 Score=233.59 Aligned_cols=217 Identities=14% Similarity=0.175 Sum_probs=154.3
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|+++.|+++++|+.|... ....++++|.. ..+.||.+. ++...|.|||++++.+++++ +|+||......
T Consensus 66 P~i~~~~Gd~v~v~~~N~~~-~~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~~y~f~~~~--~Gt~~yH~H~~ 136 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAGA-HPHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSFTYEFDATP--FGTHLYHCHQS 136 (288)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCCEESSCC--CGGGSCCTT----STTCSBCTTCEEEEEEECCS--CEEEEEECCCS
T ss_pred CcEEEeCCCEEEEEEEeCCC-CcccEEecccc--ccccCCCCC----ccceeECCCCEEEEEEEcCC--CccEEEEecCc
Confidence 58999999999999999874 45677888764 457899875 23467899999999999964 79999886543
Q ss_pred CCCC-CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeecc-C--Ce
Q 012467 196 GRKP-ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI-N--GF 271 (463)
Q Consensus 196 ~~~~-~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~-~--~~ 271 (463)
.... ......+.|.+++... . + ..++++.+.+..... + ..
T Consensus 137 ~~~~~~~~Gl~G~liV~~~~~-------~---~--------------------------~~d~e~~l~~~d~~~~~g~~~ 180 (288)
T 3gdc_A 137 PLAPHIAKGLYGGFIVEPKEG-------R---P--------------------------PADDEMVMVMNGYNTDGGDDN 180 (288)
T ss_dssp SHHHHHHTTCEEEEEEECSSC-------C---C--------------------------CCSEEEEEEEEEECCSSTTCC
T ss_pred chHHHHhCcCeEEEEEeCCcc-------C---C--------------------------CCcceEEEEEeeEecCCCCCc
Confidence 2000 1123344444442100 0 0 123444444332111 1 12
Q ss_pred EEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCC
Q 012467 272 TKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRP 351 (463)
Q Consensus 272 ~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~ 351 (463)
..|.|||..|... .+ .+.++.|++|+|.|.|.+..
T Consensus 181 ~~~~iNG~~~~~~-------------------~~------------------------~l~v~~Ge~vr~~l~N~g~~-- 215 (288)
T 3gdc_A 181 EFYSVNGLPFHFM-------------------DF------------------------PVKVKQHELVRIHLINVLEY-- 215 (288)
T ss_dssp SEEEETTSTTHHH-------------------HS------------------------CEEEETTCCEEEEEEECCCS--
T ss_pred ceEEECccccccc-------------------Cc------------------------ccccCCCCEEEEEEEeCCCC--
Confidence 3578888765210 00 17889999999999998753
Q ss_pred CCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhHHcccee
Q 012467 352 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 431 (463)
Q Consensus 352 ~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~ 431 (463)
...||||||||.|+|++.|. . +..+.++||+.|+||+++.|+|++++||.|+||||+++|++.|||+
T Consensus 216 --~~~H~fHlhG~~f~v~~~g~--~---------~~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~ 282 (288)
T 3gdc_A 216 --DPINSFHIHGNFFHYYPTGT--M---------LTPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMG 282 (288)
T ss_dssp --SSEEEEEETTCCEEEEETTC--C---------SSCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEE
T ss_pred --CcceeEEEcCCEEEEEcCCC--c---------cCCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCE
Confidence 11599999999999997532 1 1345899999999999999999999999999999999999999999
Q ss_pred eeec
Q 012467 432 VLAL 435 (463)
Q Consensus 432 ~~~~ 435 (463)
.|.+
T Consensus 283 ~~~V 286 (288)
T 3gdc_A 283 FFEV 286 (288)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
No 29
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.95 E-value=8.1e-28 Score=237.50 Aligned_cols=183 Identities=19% Similarity=0.187 Sum_probs=134.9
Q ss_pred cccccccceeEEEeccc----hhhhhcceeeEEEEeCCCCC----CCCCCCCcceEEEEeeeecccHH--HHHhhhcCCC
Q 012467 2 LDVWQVQAGTYFYHGHL----GMQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHRSVH--EQEVGLSSRP 71 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~----~~q~~~Gl~G~lIV~~~~~~----~~p~~~d~e~~l~l~D~~~~~~~--~~~~~~~~~~ 71 (463)
|+|.+.++||||||||. +.|+.+||+|+|||++++.. +.+..||+|++|+++||++.... ++ ..+...+
T Consensus 116 y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~~~g~~-~~~~~~~ 194 (336)
T 1oe1_A 116 LRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKGPDGKY-KDYATLA 194 (336)
T ss_dssp EEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSSB-CCCSSTG
T ss_pred EEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccccCCce-eeccccc
Confidence 77888999999999995 57999999999999987532 23567899999999999985221 11 0010000
Q ss_pred CC--------CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEE-
Q 012467 72 LR--------WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLA- 142 (463)
Q Consensus 72 ~~--------~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~- 142 (463)
.. ....++.++|||+....|. .+.++|++|++||| +|+++.+.+.|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~liNG~~~~~~~----------------------~~~l~v~~GervRl--in~~~~~~~~~~~ 250 (336)
T 1oe1_A 195 ESYGDTVQVMRTLTPSHIVFNGKVGALTG----------------------ANALTAKVGETVLL--IHSQANRDTRPHL 250 (336)
T ss_dssp GGHHHHHHHHHTTCCSEEEETTSTTTTSG----------------------GGCEEEETTCEEEE--EEEESSSCBCEEE
T ss_pred ccccchhhHhhcCCCCEEEECCeeccCCC----------------------CcceEcCCCCEEEE--EecCCCCccceEE
Confidence 00 0236789999999875221 13689999997665 677666665544
Q ss_pred EeCceeEEEEeCCccccee--eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 143 VKNHKMVVVEADGNYVQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 143 i~~h~~~via~DG~~v~P~--~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
|++|.|+||+ ||.+++|. .++++.|++||||||+|++++ +|+|+++....... ......|+++|++.
T Consensus 251 i~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~~--pG~y~~~~h~~~~~-~~~G~~~~~~V~~~ 319 (336)
T 1oe1_A 251 IGGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFKQ--PGVYAYLNHNLIEA-FELGAAGHIKVEGK 319 (336)
T ss_dssp TTCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEEEEEESC
T ss_pred ECCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcCC--CceEEEEechhhcc-ccCCCeEEEEECCC
Confidence 6999999997 99999875 368999999999999999997 59999987653211 12456799999854
No 30
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=1e-27 Score=234.06 Aligned_cols=219 Identities=18% Similarity=0.239 Sum_probs=149.6
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|+++.|+++++|+.|... ....++.+|.... ..+.||.+. +....|.|||+++..+++++ +|+||.....
T Consensus 34 P~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~~y~f~~~~--~Gt~wYH~H~ 106 (318)
T 3g5w_A 34 PLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTFTYKFKAEP--AGTMWYHCHV 106 (318)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECCS--CEEEEEECCS
T ss_pred ceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEEEEEEEcCC--CEEEEEEccC
Confidence 58999999999999999874 4567777776543 236899864 23457899999999999975 6999987654
Q ss_pred cCCCCC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeec------
Q 012467 195 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT------ 267 (463)
Q Consensus 195 ~~~~~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~------ 267 (463)
...... .....+.|.+++... .+ .+ ...++++.+.+....
T Consensus 107 ~~~~~~~~~Gl~G~lIV~~~~~-------~~-~~-------------------------~~~d~e~~l~l~dw~~~~~~~ 153 (318)
T 3g5w_A 107 NVNEHVTMRGMWGPLIVEPKNP-------LP-IE-------------------------KTVTKDYILMLSDWVSSWANK 153 (318)
T ss_dssp SHHHHHHHSCCEEEEEEECSSC-------CH-HH-------------------------HTCCEEEEEEEEEECGGGTTC
T ss_pred ChhhhhccCCCEEEEEEcCCCc-------cc-cc-------------------------ccccceeEEEEEeeccccccc
Confidence 211000 122334444442110 00 00 001222222111000
Q ss_pred -------cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEE
Q 012467 268 -------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVD 340 (463)
Q Consensus 268 -------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 340 (463)
......|.|||..+.. . ..+.++.|++|+
T Consensus 154 ~~~~~~~~~~~d~~~ING~~~~~--------------------~------------------------~~l~v~~G~~vr 189 (318)
T 3g5w_A 154 PGEGGIPGDVFDYYTINAKSFPE--------------------T------------------------QPIRVKKGDVIR 189 (318)
T ss_dssp TTCCCCTTCCCCEEEETTBCBTS--------------------S------------------------CCEEECTTCEEE
T ss_pred cccCCCCCCcCcEEEEcCcCCCC--------------------C------------------------ccEEeCCCCEEE
Confidence 0011247777765411 0 027889999999
Q ss_pred EEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeeccc
Q 012467 341 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCH 420 (463)
Q Consensus 341 ~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCH 420 (463)
|+|.|.+.. .||||||||.|+|+++. |.. +.+|.++||+.|+||+++.|+|+++|||.|+||||
T Consensus 190 lrliN~~~~------~h~~hlhGh~f~vi~~d-G~~---------~~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH 253 (318)
T 3g5w_A 190 LRLIGAGDH------VHAIHTHGHISQIAFKD-GFP---------LDKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDH 253 (318)
T ss_dssp EEEEECSSS------CEEEEETTSCEEEEEET-TEE---------EEEEEEESEEEECTTCEEEEEEECCSCSEEEEEES
T ss_pred EEEEeCCCc------eEEEEECCcEEEEEecC-Ccc---------cCCCccccEEEECCCCEEEEEEECCCCeeEEEEec
Confidence 999999866 89999999999999984 321 12467899999999999999999999999999999
Q ss_pred chHhHH------ccceeeee
Q 012467 421 IEPHFH------IGMGVVLA 434 (463)
Q Consensus 421 i~~H~~------~GM~~~~~ 434 (463)
+++|++ .|||+++.
T Consensus 254 ~~~H~~~g~~~~~Gm~~~i~ 273 (318)
T 3g5w_A 254 VDTHTTNGDKPDGGIMTTIE 273 (318)
T ss_dssp SGGGSCBTTBSSCBSEEEEE
T ss_pred cHHHhhccCcCCCCCEEEEE
Confidence 999998 57888885
No 31
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.94 E-value=3.7e-27 Score=228.19 Aligned_cols=216 Identities=19% Similarity=0.269 Sum_probs=148.7
Q ss_pred CCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCC---------
Q 012467 113 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD--------- 183 (463)
Q Consensus 113 ~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~--------- 183 (463)
.+.|+|+++.|++++++|.|... ....|+..|..+. -+.||.++. .-.|.|||.+...++++..
T Consensus 55 ~PGP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~ 127 (299)
T 3t9w_A 55 VPGPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWA 127 (299)
T ss_dssp SSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEE
T ss_pred ccCceEEEECCeEEEEEEEECCC-CCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCC
Confidence 34579999999999999999864 4556777776543 357997642 1247899999998887631
Q ss_pred --CCCceEEEEEecCCCCC----CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccce
Q 012467 184 --PSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHR 257 (463)
Q Consensus 184 --~~g~y~ir~~~~~~~~~----~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~ 257 (463)
..|.||-.......... .....+.|..++.. . ...|+
T Consensus 128 ~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~----------------------------------~---~~~d~ 170 (299)
T 3t9w_A 128 EGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQG----------------------------------D---LLPKR 170 (299)
T ss_dssp CCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT----------------------------------C---CCCSE
T ss_pred CCCceeEEEecCCcccccchhhhcccccceEEEeccc----------------------------------c---cCccc
Confidence 34777776533221100 01223333332100 0 01256
Q ss_pred EEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCC
Q 012467 258 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337 (463)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (463)
++.+.+. .|.+|+..+.. .+ .+.++.|+
T Consensus 171 e~~l~~~--------~~~~Ng~~~~~--------------------~p------------------------~l~v~~Ge 198 (299)
T 3t9w_A 171 QFTVVFN--------DMMINNRAHHD--------------------AP------------------------TFEANLGE 198 (299)
T ss_dssp EEEEEEE--------TTEETTCCTTC--------------------CC------------------------EEEEETTC
T ss_pred cceeeee--------eeeecCccccc--------------------cc------------------------cceecCCC
Confidence 6665542 36788765411 11 27889999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEE---EEEEcCCcee
Q 012467 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTA---LRFVADNPGA 414 (463)
Q Consensus 338 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~---irf~adnpG~ 414 (463)
+|+|+|.|.+.. .||||||||.|+|+..+..... ...+.++||+.|.||+... ++|+++|||.
T Consensus 199 ~Vr~~liN~~~~------~HpfHlHGh~F~v~~~g~~~~~--------~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~ 264 (299)
T 3t9w_A 199 RVEWIAIGHGSN------FHTFHLHGHRWLDNRTGMRTSE--------YDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGM 264 (299)
T ss_dssp EEEEEEEEESSC------CCEEEETTCCEESSSSSSCCST--------TCCCCEESEEECCTTCEEEEEEETTTTTCSEE
T ss_pred EEEEEEEecccc------ceeeeEecceEEEEecccccCC--------cCCCCceeeEEeCCceeEEEEEEEeeCCCCee
Confidence 999999998876 8999999999999887543221 2335689999999997654 4556789999
Q ss_pred eeecccchHhHHccceeeeecccc
Q 012467 415 WAFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 415 w~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
|+||||+++|++.|||++|.+...
T Consensus 265 w~~HCHi~~H~~~GM~~~f~V~~~ 288 (299)
T 3t9w_A 265 WMYHCHVQNHSDMGMAGMFLVRNA 288 (299)
T ss_dssp EEEEECSHHHHHTTCEEEEEEECT
T ss_pred EEEEcCCHHHHhcCCeEEEEEECC
Confidence 999999999999999999987654
No 32
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.94 E-value=1.7e-26 Score=227.68 Aligned_cols=182 Identities=18% Similarity=0.173 Sum_probs=134.4
Q ss_pred cccccccceeEEEeccch-----hhhhcceeeEEEEeCCCCC----CCCCCCCcceEEEEeeeeccc--HHHHHhhhcC-
Q 012467 2 LDVWQVQAGTYFYHGHLG-----MQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHRS--VHEQEVGLSS- 69 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~-----~q~~~Gl~G~lIV~~~~~~----~~p~~~d~e~~l~l~D~~~~~--~~~~~~~~~~- 69 (463)
|+|.+.++||||||||.. .|+.+||+|+|||++++.. ..|..||+|++|+++||++.. ..++. .+..
T Consensus 115 y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~-~~~~~ 193 (333)
T 1mzy_A 115 LRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYM-RFSDP 193 (333)
T ss_dssp EEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBCTTSCBC-CCSSH
T ss_pred EEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCcccccccc-ccccc
Confidence 678889999999999975 6999999999999987532 235678999999999999842 11110 0000
Q ss_pred --------CCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEE
Q 012467 70 --------RPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNL 141 (463)
Q Consensus 70 --------~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~ 141 (463)
.... ...++.++|||+... + ...+.++|++||+||||++|++....+.+
T Consensus 194 ~~~~~~~~~~~~-~~~~~~~~ING~~~~-------~---------------~~~~~l~v~~Ger~Rl~n~~~~~~~~~h~ 250 (333)
T 1mzy_A 194 SEGYEDMVAVMD-TLIPSHIVFNGAVGA-------L---------------TGEGALKAKVGDNVLFVHSQPNRDSRPHL 250 (333)
T ss_dssp HHHHHHHHHHHT-TTCCSEEEETTSTTT-------T---------------SGGGCEEEETTCEEEEEEEESSSCBCEEE
T ss_pred cccccchhHHhh-ccCCcEEEECCcccc-------c---------------CCCcceEecCCCEEEEEECCCCCccccEE
Confidence 0000 236789999999753 1 00136899999999888777665544544
Q ss_pred EEeCceeEEEEeCCcccce-e-eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCC
Q 012467 142 AVKNHKMVVVEADGNYVQP-F-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHP 212 (463)
Q Consensus 142 ~i~~h~~~via~DG~~v~P-~-~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~ 212 (463)
+++|.++||+ ||.+++| . .++++.|+||||+||+|++++ +|+|++........ ......++++|.+
T Consensus 251 -i~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~~--pG~y~~~ch~~~h~-~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 251 -IGGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFLQ--PGVYAYVNHNLIEA-VHKGATAHVLVEG 318 (333)
T ss_dssp -ETCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTCCEEEEEEES
T ss_pred -ECCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcCC--CEEEEEecChhhhH-hhCCCEEEEEEcC
Confidence 8999999999 9999974 3 489999999999999999997 59999987654221 0235678999975
No 33
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.94 E-value=6.7e-27 Score=224.18 Aligned_cols=215 Identities=17% Similarity=0.283 Sum_probs=153.5
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCC----------
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD---------- 183 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~---------- 183 (463)
..|+|+++.|+++++++.|.. .....++..|..+.. +.||.++ ..-.|.||+++...+++++.
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 446899999999999999986 556777787766543 5899872 33568999999999999752
Q ss_pred -CCCceEEEEEecCCC---CC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceE
Q 012467 184 -PSYNYWISAGVRGRK---PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 258 (463)
Q Consensus 184 -~~g~y~ir~~~~~~~---~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~ 258 (463)
..|.||-........ .+ .....+.|...... ... .|++
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~----------------------------------~~~---~drE 149 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG----------------------------------DVL---PDAT 149 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT----------------------------------CCC---CSEE
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEecCC----------------------------------Ccc---cccc
Confidence 246777765432211 00 11233333333100 000 1566
Q ss_pred EEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCE
Q 012467 259 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 338 (463)
Q Consensus 259 ~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (463)
+.+.+. .|.|||..+.. .+ .+.++.|++
T Consensus 150 ~~l~l~--------~~~iNG~~~~~--------------------~p------------------------~i~v~~G~~ 177 (276)
T 3kw8_A 150 HTIVFN--------DMTINNRKPHT--------------------GP------------------------DFEATVGDR 177 (276)
T ss_dssp EEEEEE--------TTEETTCCTTC--------------------CC------------------------CEEEETTCE
T ss_pred eEEEec--------ccccceecccC--------------------CC------------------------CEEEecCCE
Confidence 655442 37899987531 01 288999999
Q ss_pred EEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC---Cceee
Q 012467 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD---NPGAW 415 (463)
Q Consensus 339 v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad---npG~w 415 (463)
|+|+|.|.+.+ .||||||||.|+|++. |.++.. ...+.++||+.|.||+++.++|+++ |||.|
T Consensus 178 vri~l~N~~~~------~Hp~HlHG~~f~v~~~--G~~~~p------~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w 243 (276)
T 3kw8_A 178 VEIVMITHGEY------YHTFHMHGHRWADNRT--GILTGP------DDPSRVIDNKITGPADSFGFQIIAGEGVGAGAW 243 (276)
T ss_dssp EEEEEEEESSC------CEEEEETTCCEESSSS--SSCCST------TCCCCEESEEEECTTCEEEEEEETTTTTCSEEE
T ss_pred EEEEEecCCCc------ceeEEEccceeEEecc--CccCCC------cccccCCccEEeCCCceEEEEEEeccCCCCCeE
Confidence 99999998876 9999999999999763 433210 1224689999999999999999997 89999
Q ss_pred eecccchHhHHccceeeeecccc
Q 012467 416 AFHCHIEPHFHIGMGVVLALGVE 438 (463)
Q Consensus 416 ~~HCHi~~H~~~GM~~~~~~~~~ 438 (463)
+||||+++|++.|||++|.+.+.
T Consensus 244 ~~HCH~~~H~~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 244 MYHCHVQSHSDMGMVGLFLVKKP 266 (276)
T ss_dssp EEEECSHHHHHTTCEEEEEEECT
T ss_pred EEECCCchHhhCCCeEEEEEeCC
Confidence 99999999999999999976553
No 34
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.94 E-value=9.7e-27 Score=230.16 Aligned_cols=184 Identities=15% Similarity=0.139 Sum_probs=131.5
Q ss_pred cccccccceeEEEeccch----hhhhcceeeEEEEeCCCCC----CCCCCCCcceEEEEeeeecc--cHHHHHhhhcCCC
Q 012467 2 LDVWQVQAGTYFYHGHLG----MQRSAGLYGSLIVDVADGE----KEPFHYDGEFNLLLSDWWHR--SVHEQEVGLSSRP 71 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~----~q~~~Gl~G~lIV~~~~~~----~~p~~~d~e~~l~l~D~~~~--~~~~~~~~~~~~~ 71 (463)
|+|.+.++||||||||.. .|+.+||+|+|||+++++. ..|..||+|++|+++||++. ....+. .+...+
T Consensus 122 y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~g~~~-~~~~~~ 200 (340)
T 2bw4_A 122 LRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYK-KYETPG 200 (340)
T ss_dssp EEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEECCSEEEEEEEEEECCCBCTTSCBC-CCCSHH
T ss_pred EEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCcCcceeEEEeeeeeeeccccCCccc-cccccc
Confidence 678888999999999954 7999999999999987531 23567899999999999984 211110 000000
Q ss_pred --------CCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEE
Q 012467 72 --------LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAV 143 (463)
Q Consensus 72 --------~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i 143 (463)
......++.++|||+..... ..+.++|++|+++||+++|++....+. .+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~iNG~~~~~~----------------------~~~~l~v~~G~r~Rl~n~~~~~~~~~~-~i 257 (340)
T 2bw4_A 201 EAYEDAVKAMRTLTPTHIVFNGAVGALT----------------------GDHALTAAVGERVLVVHSQANRDTRPH-LI 257 (340)
T ss_dssp HHHHHHHHHHHTTCCSEEEETTSTTTTS----------------------GGGCEEEETTCEEEEEEEESSSCBCEE-EE
T ss_pred ccccchhhHhhcCCCCEEEECCccCCcc----------------------CCCceEcCCCCEEEEEECCCCCccceE-Ee
Confidence 00023678999999986310 124689999998877666655433333 38
Q ss_pred eCceeEEEEeCCcccce-e-eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 144 KNHKMVVVEADGNYVQP-F-EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 144 ~~h~~~via~DG~~v~P-~-~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
++|.|+||+ ||.++.+ . .++++.|++|||+||+|++++ +|+|+++....... ......++++|++.
T Consensus 258 ~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~~--pG~y~~~~h~~~~h-~~~Gm~~~~~V~~~ 325 (340)
T 2bw4_A 258 GGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ--PGVYAYVNHNLIEA-FELGAAGHFKVTGE 325 (340)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECCS--CEEEEEEESSHHHH-HTTSCEEEEEEESC
T ss_pred cCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECCC--CeeeEEEcCchHHH-HhCCCEEEEEECCC
Confidence 999999997 9998864 3 589999999999999999997 59999988654211 12345788999853
No 35
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=9.8e-26 Score=219.86 Aligned_cols=216 Identities=17% Similarity=0.254 Sum_probs=148.3
Q ss_pred CCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCC---------
Q 012467 112 QCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQ--------- 182 (463)
Q Consensus 112 ~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~--------- 182 (463)
+.+.|+|+++.|++++++|.|... ....|+..|..+. -+.||.++. .-.|.|||.+...+++..
T Consensus 38 t~PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~-~~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~ 110 (313)
T 3tas_A 38 TIPGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYE-ISSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTW 110 (313)
T ss_dssp BSSCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCE
T ss_pred cccCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCC-ccCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccc
Confidence 345578999999999999999864 4456677775543 257887642 124789999988887653
Q ss_pred --CCCCceEEEEEecCCCCC----CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccc
Q 012467 183 --DPSYNYWISAGVRGRKPA----TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH 256 (463)
Q Consensus 183 --~~~g~y~ir~~~~~~~~~----~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d 256 (463)
...|.||-.......... .....+.|.+.+. .....|
T Consensus 111 ~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~-------------------------------------~~~~~d 153 (313)
T 3tas_A 111 RAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK-------------------------------------GDVLPD 153 (313)
T ss_dssp ECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT-------------------------------------TCBCCS
T ss_pred cCCCceEEEEeecCcccccchhhhhccccCceEeecc-------------------------------------cccccc
Confidence 124667765432211100 0122333333310 001135
Q ss_pred eEEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 257 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
+++.+.+. .|++|+..+.. .+ .+.++.|
T Consensus 154 ~e~~l~~~--------d~t~Ng~~~~~--------------------~~------------------------~l~v~~G 181 (313)
T 3tas_A 154 RTHTIVFN--------DMTINNRPAHT--------------------GP------------------------DFEATVG 181 (313)
T ss_dssp EEEEEEEE--------TTEETTCCTTC--------------------CC------------------------CEEEETT
T ss_pred ccceeecc--------chhcccCCccc--------------------cc------------------------ccccccC
Confidence 66665543 37788765421 11 1788999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE---cCCce
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV---ADNPG 413 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~---adnpG 413 (463)
++|+|+|.|.+.+ .||||||||.|+|+.++.... ....+.++||+.|.|++.+.++|. ++|||
T Consensus 182 e~vr~~liN~g~~------~hpfHlHGh~F~v~~~~~~~~--------~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG 247 (313)
T 3tas_A 182 DRVEFVMITHGEY------YHTFHLHGHRWADNRTGMLTG--------PDDPSQVIDNKICGPADSFGFQVIAGEGVGAG 247 (313)
T ss_dssp CEEEEEEEEESSC------CEEEEETTCCEESSTTSSCCS--------TTCCCCEESEEEECTTCEEEEEEETTTTTCSE
T ss_pred CEEEEEEeccccc------ceeeeecCCeeEEEEECCccC--------CCCCCeeeeEEEeCCCcceEEEEEeccCCCCE
Confidence 9999999999876 899999999999988753221 123468999999999998877775 56899
Q ss_pred eeeecccchHhHHccceeeeeccc
Q 012467 414 AWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 414 ~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
.|+||||+++|++.|||++|.+..
T Consensus 248 ~w~~HCHi~~H~~~GM~~~f~V~~ 271 (313)
T 3tas_A 248 AWMYHCHVQSHSDMGMVGLFLVKK 271 (313)
T ss_dssp EEEEEECSHHHHHTTCEEEEEEEC
T ss_pred eEEEEeCChHHHHCCCeEEEEEEC
Confidence 999999999999999999997554
No 36
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.92 E-value=8.1e-25 Score=210.96 Aligned_cols=147 Identities=16% Similarity=0.226 Sum_probs=122.3
Q ss_pred cccccccceeEEEeccch---hhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLG---MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEP 78 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~---~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~ 78 (463)
|+|.+.++||||||||.. .|+.+||+|+|||+++++ ...+|+|++|+++||+.++. ..+
T Consensus 119 y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~---~~~~d~e~~l~~~d~~~~~g---------------~~~ 180 (288)
T 3gdc_A 119 YEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEG---RPPADDEMVMVMNGYNTDGG---------------DDN 180 (288)
T ss_dssp EEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSC---CCCCSEEEEEEEEEECCSST---------------TCC
T ss_pred EEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCcc---CCCCcceEEEEEeeEecCCC---------------CCc
Confidence 788899999999999965 799999999999998865 23568999999999987621 146
Q ss_pred CeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcce-EEEEEEeCceeEEEEeCCcc
Q 012467 79 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 79 d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~~~~i~~h~~~via~DG~~ 157 (463)
+..+|||+... + ....++++.|+++||||+|++... .+.|+|+||.|+|++ +|..
T Consensus 181 ~~~~iNG~~~~-------~----------------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~ 236 (288)
T 3gdc_A 181 EFYSVNGLPFH-------F----------------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTM 236 (288)
T ss_dssp SEEEETTSTTH-------H----------------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCC
T ss_pred ceEEECccccc-------c----------------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCc
Confidence 78999999763 0 012478999999999999999654 799999999999998 5554
Q ss_pred c-ceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 158 V-QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 158 v-~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
+ .|...|++.|+||||++|++++++ +|.|.+.-
T Consensus 237 ~~~~~~~Dtv~v~pg~~~~v~~~~~~--pG~~~~hC 270 (288)
T 3gdc_A 237 LTPSEYTDTISQVQGQRGILELRFPY--PGKFMFHA 270 (288)
T ss_dssp SSCSEEESEEEEETTCEEEEEECCCS--CEEEEEEC
T ss_pred cCCCceeeEEEeCCCceEEEEEECCC--CEEEEEEe
Confidence 4 568899999999999999999986 68988754
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.92 E-value=2.9e-24 Score=220.31 Aligned_cols=183 Identities=18% Similarity=0.204 Sum_probs=139.7
Q ss_pred cccccccceeEEEeccc---hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhh-cCCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHL---GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGL-SSRPLRWIGE 77 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~---~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~-~~~~~~~~~~ 77 (463)
|.|.+.++||||||||. ..|+.+||+|+|||++++. .| .+|+|++++++||++.......... ..........
T Consensus 246 ~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~--~P-~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (447)
T 2dv6_A 246 VTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG--LP-QVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEK 322 (447)
T ss_dssp EEEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC--SC-CCSEEEEEEEEEECBSSCTTCCEECCBBHHHHHTTC
T ss_pred EEEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC--CC-CCCeeEEEEecccccCCcccccccccCChHHhhccC
Confidence 56777899999999995 4799999999999998743 23 5789999999999976421100000 0000000125
Q ss_pred CCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc
Q 012467 78 PQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY 157 (463)
Q Consensus 78 ~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~ 157 (463)
++.++|||+....+. ...+.|++|++|||||+|++....+.|+|+||.|+||+.||++
T Consensus 323 ~~~~~iNG~~~~~~~----------------------~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~ 380 (447)
T 2dv6_A 323 PEYFLFNGSVGSLTR----------------------SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSV 380 (447)
T ss_dssp CSEEEETTSTTCCCC----------------------CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCS
T ss_pred CCEEEECCcccCCCC----------------------CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcc
Confidence 688999999875221 1268999999999999999988899999999999999999999
Q ss_pred ccee--eEeeEEecCCceEEEEEecCCCCCCceEEEEEecCCCCCCCCeEEEEEeCCC
Q 012467 158 VQPF--EVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPT 213 (463)
Q Consensus 158 v~P~--~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~~ 213 (463)
+.|. ..|++.|+||||++|+|++++ +|.|+|+...... ......++++|++.
T Consensus 381 ~~~p~~~~dtv~l~pg~r~~i~~~~~~--pG~~~~hch~~~h--~~~Gm~~~~~v~~~ 434 (447)
T 2dv6_A 381 VSPPLIGVQTVSVPPGGATIVDFKIDR--AGRYILVDHALSR--LEHGLVGFLNVDGP 434 (447)
T ss_dssp SSCCEEEESEEEECTTEEEEEEEECCS--CEEEEEEESSGGG--GGGTCCEEEEECSC
T ss_pred cCCCcccccEEEECCCcEEEEEEECCC--CEEEEEEecCcCc--cccCCEEEEEEeCC
Confidence 9765 489999999999999999986 6899998865432 12345799999853
No 38
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=4.2e-23 Score=220.78 Aligned_cols=159 Identities=13% Similarity=0.125 Sum_probs=118.7
Q ss_pred ccccccc------ce----eEEEeccc--hhhhhcceeeEEEEeCCCCCCC--CCCC-CcceEEEEe------eeecccH
Q 012467 2 LDVWQVQ------AG----TYFYHGHL--GMQRSAGLYGSLIVDVADGEKE--PFHY-DGEFNLLLS------DWWHRSV 60 (463)
Q Consensus 2 ~~~~~~~------~G----T~WYHsH~--~~q~~~Gl~G~lIV~~~~~~~~--p~~~-d~e~~l~l~------D~~~~~~ 60 (463)
|+|.+.+ +| |||||||. ..|+.+||+|+|||+++.+... ...+ ++|++|+|+ ||+++..
T Consensus 131 Y~f~~~~~~gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~ 210 (647)
T 1sdd_B 131 YVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKK 210 (647)
T ss_dssp CCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC--
T ss_pred EEEECCcccCCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccC
Confidence 6677765 58 99999996 6799999999999999864211 1123 689999999 7777654
Q ss_pred HHHHhhhcCCCCCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcce-EE
Q 012467 61 HEQEVGLSSRPLRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALA-SL 139 (463)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~-~~ 139 (463)
.......... .+...++.++|||+... .+.|.|++|++|||||||++... .+
T Consensus 211 ~~~~~~~~~~--~~~~~~~~~~iNG~~~~-------------------------~p~l~v~~G~~vrlrliN~~~~~~~h 263 (647)
T 1sdd_B 211 PTRSWRRASS--EVKNSHEFHAINGMIYN-------------------------LPGLRMYEQEWVRLHLLNLGGSRDIH 263 (647)
T ss_dssp ---------------CCCEEEEETTBSSC-------------------------CCCCEEETTCEEEEEEEECCCTTCCE
T ss_pred cccccccCCc--chhhcCceeccCCEecC-------------------------CCCeEEcCCCEEEEEEEeCCCCCcce
Confidence 3211111111 11335788999999752 13689999999999999999874 89
Q ss_pred EEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 140 NLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 140 ~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
.|+|+||.|+||+.||. .++++.|+||||+||+|++++ +|.|.+....
T Consensus 264 ~~hlhG~~f~vi~~d~~-----~~d~v~l~pg~r~~v~~~~~~--pG~w~~hch~ 311 (647)
T 1sdd_B 264 VVHFHGQTLLENGTQQH-----QLGVWPLLPGSFKTLEMKASK--PGWWLLDTEV 311 (647)
T ss_dssp EEEETTCCEEECSSSCE-----EESSEEECTTEEEEEEEECCS--SEEEEEECCC
T ss_pred eEEEcCcEEEEecCCCc-----ccceEEECCCeEEEEEEEecc--ceEeecccCc
Confidence 99999999999999864 689999999999999999987 5888776553
No 39
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.89 E-value=8.1e-25 Score=212.79 Aligned_cols=228 Identities=11% Similarity=0.116 Sum_probs=129.1
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc----eeeEeeEEecCCceEEEEEecCCCC------
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ----PFEVDDMDIYSGESYSVLLTTNQDP------ 184 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~----P~~~~~l~i~~GeR~dvlV~~~~~~------ 184 (463)
.|+|++++|+++|+||+|.. ...+.|+.+|..+. .+.||.+.. +...+...|.||||++..+++++..
T Consensus 59 GP~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~-~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~~~~gp~~~d 136 (306)
T 1sdd_A 59 GPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYS-KFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIISEHSGPTHDD 136 (306)
T ss_dssp CCCEEEETTCEEEEEEEECS-SSCBCCEEESSCCC-TTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECCGGGSCCSSS
T ss_pred CCEEEEeCCCEEEEEEEECC-CCcccEeecceecc-cccCCCccCCCCcccccCCCccCCCCeEEEEEEeCCccCCCCCC
Confidence 35899999999999999976 45556666665532 268998752 2233357899999999999998732
Q ss_pred --CCceEEEEEecCCCC-CCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEE
Q 012467 185 --SYNYWISAGVRGRKP-ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTL 261 (463)
Q Consensus 185 --~g~y~ir~~~~~~~~-~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~ 261 (463)
.|+||.+........ ...-.-++|.....+... .+..+.. +. ++...+.. +
T Consensus 137 ~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~-----~~~~~~~-d~----e~~l~~~d----------------~ 190 (306)
T 1sdd_A 137 PPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTE-----DGTQKMF-EK----QHVLMFAV----------------F 190 (306)
T ss_dssp CSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCT-----TSSBSSS-CC----CCCCBCCE----------------E
T ss_pred CCceEEEEeccCCchhhhccCceEEEEEccCCCCCc-----cCCcCcc-cc----eEEEEEEe----------------c
Confidence 269999876322100 111122444443221110 0000000 00 00000000 0
Q ss_pred Eeeee-ccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEE
Q 012467 262 LNTQN-TINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVD 340 (463)
Q Consensus 262 ~~~~~-~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ 340 (463)
..... .......|.|||..+.. .| .+.++.|++++
T Consensus 191 d~~~~~~~~~~~~~~ING~~~~~---------------------~p-----------------------~l~v~~G~~vr 226 (306)
T 1sdd_A 191 DESKSWNQTSSLMYTVNGYVNGT---------------------MP-----------------------DITVCAHDHIS 226 (306)
T ss_dssp ETTSSSSCCCCEEECSSSCCSSC---------------------CC-----------------------CCCCCCC----
T ss_pred ccccccccCCCcceeeCCEecCC---------------------Cc-----------------------ceEEcCCCEEE
Confidence 00000 00011346677765410 00 15678999999
Q ss_pred EEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeeccc
Q 012467 341 VILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCH 420 (463)
Q Consensus 341 ~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCH 420 (463)
|+|.|.+.. ...|+||||||.|.+ +| .++||+.|.||+.+.|+|++++||.|+||||
T Consensus 227 lrliN~g~~----~~~h~~hlhG~~~~~----dG---------------~~~dtv~l~pger~~v~~~~~~pG~~~~hch 283 (306)
T 1sdd_A 227 WHLIGMSSG----PELFSIHFNGQVLEQ----NH---------------HKISAITLVSATSTTANMTVSPEGRWTIASL 283 (306)
T ss_dssp --BBCCCSS----SCEECCBCSSTTCEE----TT---------------EECSCCCEETTCCBC--------CCCCCBCC
T ss_pred EEEEeCCCC----CccEEEEECCcEeee----CC---------------EEcceEEECCCcEEEEEEEcCCCeEEEEEeC
Confidence 999998753 127999999999986 22 4689999999999999999999999999999
Q ss_pred chHhHHccceeeeeccc
Q 012467 421 IEPHFHIGMGVVLALGV 437 (463)
Q Consensus 421 i~~H~~~GM~~~~~~~~ 437 (463)
+++|++.||+++|.+.+
T Consensus 284 ~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 284 IPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp STTTGGGTCBCCC----
T ss_pred ChHHHhcCCeEEEEEec
Confidence 99999999999997654
No 40
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.89 E-value=1.5e-22 Score=216.57 Aligned_cols=246 Identities=16% Similarity=0.187 Sum_probs=141.5
Q ss_pred CCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce----eeEeeEEecCCceEEEEEecCCCC----
Q 012467 113 CAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP----FEVDDMDIYSGESYSVLLTTNQDP---- 184 (463)
Q Consensus 113 ~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P----~~~~~l~i~~GeR~dvlV~~~~~~---- 184 (463)
.+.|+|.+++|+++++||+|... ....|+.+|.... .+.||.+... ..+....|.|||+++..+++++..
T Consensus 66 ~pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~ 143 (647)
T 1sdd_B 66 ILGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPEN 143 (647)
T ss_dssp TSCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCS
T ss_pred CcCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCC
Confidence 35579999999999999999975 4455666665443 5889987532 223456799999999999998742
Q ss_pred CC----ceEEEEEecCCCCCCCCeE-EEEEeCCCCCCCCCCCCCCCCCCCCCCccccccc-cccc-ccCCCCCCCCccce
Q 012467 185 SY----NYWISAGVRGRKPATPPAL-TLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS-NKIF-ALMGSPKPPTNFHR 257 (463)
Q Consensus 185 ~g----~y~ir~~~~~~~~~~~~~~-a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~-~~~~-~~~~~~~~p~~~d~ 257 (463)
+| +||.+.............. ++|......... .+..|. .+......+. .... +.. ..... ..
T Consensus 144 ~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~-----~~~~~~-~~~e~~l~l~~~d~~~~w~-~~~~~---~~ 213 (647)
T 1sdd_B 144 PGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDK-----ETNMPV-DMREFVLLFMVFDEKKSWY-YDKKP---TR 213 (647)
T ss_dssp SSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCT-----TSCCCS-SCCEEEEEEEEEEGGGSSC-CC--------
T ss_pred CCCCceEEEEccCCCCcccccccCccCEEEeeCCCccc-----ccCCCC-cceeEEEEEEeecCccccc-cccCc---cc
Confidence 47 9999876531110111223 333333211110 000011 0000000000 0000 000 00000 00
Q ss_pred EEEEEeeeeccCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCC
Q 012467 258 RLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337 (463)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (463)
.+.. ...........+.|||..+.. ..+.++.|+
T Consensus 214 ~~~~-~~~~~~~~~~~~~iNG~~~~~---------------------------------------------p~l~v~~G~ 247 (647)
T 1sdd_B 214 SWRR-ASSEVKNSHEFHAINGMIYNL---------------------------------------------PGLRMYEQE 247 (647)
T ss_dssp -----------CCCEEEEETTBSSCC---------------------------------------------CCCEEETTC
T ss_pred cccc-CCcchhhcCceeccCCEecCC---------------------------------------------CCeEEcCCC
Confidence 0000 000000012346666665410 027789999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeee
Q 012467 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAF 417 (463)
Q Consensus 338 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~ 417 (463)
+|+|+|.|.+.. .+.||||+|||.|+|++.. +.++||+.|.||+++.|+|++++||.|+|
T Consensus 248 ~vrlrliN~~~~----~~~h~~hlhG~~f~vi~~d----------------~~~~d~v~l~pg~r~~v~~~~~~pG~w~~ 307 (647)
T 1sdd_B 248 WVRLHLLNLGGS----RDIHVVHFHGQTLLENGTQ----------------QHQLGVWPLLPGSFKTLEMKASKPGWWLL 307 (647)
T ss_dssp EEEEEEEECCCT----TCCEEEEETTCCEEECSSS----------------CEEESSEEECTTEEEEEEEECCSSEEEEE
T ss_pred EEEEEEEeCCCC----CcceeEEEcCcEEEEecCC----------------CcccceEEECCCeEEEEEEEeccceEeec
Confidence 999999998743 1279999999999998752 36899999999999999999999999999
Q ss_pred cccchHhHHccceeeeecc
Q 012467 418 HCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 418 HCHi~~H~~~GM~~~~~~~ 436 (463)
|||+.+|++.||+++|.+.
T Consensus 308 hch~~~h~~~Gm~~~~~V~ 326 (647)
T 1sdd_B 308 DTEVGEIQRAGMQTPFLIV 326 (647)
T ss_dssp ECCCHHHHTTTCEEEEEEE
T ss_pred ccCcccccccccccceeee
Confidence 9999999999999999774
No 41
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.88 E-value=8.1e-23 Score=199.21 Aligned_cols=149 Identities=14% Similarity=0.141 Sum_probs=115.6
Q ss_pred cccceeEEEeccch------hhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCC
Q 012467 6 QVQAGTYFYHGHLG------MQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQ 79 (463)
Q Consensus 6 ~~~~GT~WYHsH~~------~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d 79 (463)
..++||||||||.. .|+.+||+|+|||+++.+ ..+|+|++|+++||+
T Consensus 112 ~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----~~~d~e~~l~~~d~t----------------------- 164 (313)
T 3tas_A 112 AGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDRTHTIVFNDMT----------------------- 164 (313)
T ss_dssp CCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----BCCSEEEEEEEETTE-----------------------
T ss_pred CCCceEEEEeecCcccccchhhhhccccCceEeecccc----ccccccceeeccchh-----------------------
Confidence 45789999999953 457899999999998864 457999999999984
Q ss_pred eEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc-
Q 012467 80 TLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV- 158 (463)
Q Consensus 80 ~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v- 158 (463)
+||+...+ .+.+.++.|+++||||+|++ ...+.|+|+||.|+|++.||...
T Consensus 165 ---~Ng~~~~~------------------------~~~l~v~~Ge~vr~~liN~g-~~~hpfHlHGh~F~v~~~~~~~~~ 216 (313)
T 3tas_A 165 ---INNRPAHT------------------------GPDFEATVGDRVEFVMITHG-EYYHTFHLHGHRWADNRTGMLTGP 216 (313)
T ss_dssp ---ETTCCTTC------------------------CCCEEEETTCEEEEEEEEES-SCCEEEEETTCCEESSTTSSCCST
T ss_pred ---cccCCccc------------------------ccccccccCCEEEEEEeccc-ccceeeeecCCeeEEEEECCccCC
Confidence 45554431 12588999999999999999 45789999999999999999876
Q ss_pred --ceeeEeeEEecCCceEEEEEecCC-CCCCceEEEEEecCCCCCCCCeEEEEEeC
Q 012467 159 --QPFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYH 211 (463)
Q Consensus 159 --~P~~~~~l~i~~GeR~dvlV~~~~-~~~g~y~ir~~~~~~~~~~~~~~a~l~y~ 211 (463)
.|..+|++.|.||||++|+|.+.+ +.+|.|.+.-....- ......+++.++
T Consensus 217 ~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H--~~~GM~~~f~V~ 270 (313)
T 3tas_A 217 DDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSH--SDMGMVGLFLVK 270 (313)
T ss_dssp TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH--HHTTCEEEEEEE
T ss_pred CCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHH--HHCCCeEEEEEE
Confidence 477899999999999999998865 246887766543211 123445666665
No 42
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.88 E-value=5.8e-24 Score=206.77 Aligned_cols=140 Identities=11% Similarity=0.133 Sum_probs=97.0
Q ss_pred ceeEEEeccchh--hhhcceeeEEEEeCCCC---CCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEEE
Q 012467 9 AGTYFYHGHLGM--QRSAGLYGSLIVDVADG---EKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLLI 83 (463)
Q Consensus 9 ~GT~WYHsH~~~--q~~~Gl~G~lIV~~~~~---~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~li 83 (463)
+||||||||... |+.+||+|+|||+++.+ .+.+..+|+|++|+++||.... +.. ...++..+|
T Consensus 139 ~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~---------~~~---~~~~~~~~I 206 (306)
T 1sdd_A 139 CLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESK---------SWN---QTSSLMYTV 206 (306)
T ss_dssp EEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTS---------SSS---CCCCEEECS
T ss_pred ceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEeccccc---------ccc---cCCCcceee
Confidence 489999999655 88999999999998753 1234567899999999984221 000 124678899
Q ss_pred CCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceee
Q 012467 84 NGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFE 162 (463)
Q Consensus 84 NG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~ 162 (463)
||+... . .+.+++++|+++||||+|++.. ..+.|+|+||.|.+ ||. .
T Consensus 207 NG~~~~--~----------------------~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG~-----~ 254 (306)
T 1sdd_A 207 NGYVNG--T----------------------MPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NHH-----K 254 (306)
T ss_dssp SSCCSS--C----------------------CCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TTE-----E
T ss_pred CCEecC--C----------------------CcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CCE-----E
Confidence 999752 1 1358899999999999999987 56779999999875 883 4
Q ss_pred EeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 163 VDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 163 ~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
++++.|+||||+||++++++ +|.|++....
T Consensus 255 ~dtv~l~pger~~v~~~~~~--pG~~~~hch~ 284 (306)
T 1sdd_A 255 ISAITLVSATSTTANMTVSP--EGRWTIASLI 284 (306)
T ss_dssp CSCCCEETTCCBC----------CCCCCBCCS
T ss_pred cceEEECCCcEEEEEEEcCC--CeEEEEEeCC
Confidence 88999999999999999986 5888876543
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.86 E-value=1.6e-21 Score=188.60 Aligned_cols=147 Identities=15% Similarity=0.210 Sum_probs=113.3
Q ss_pred cceeEEEeccc------hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 8 QAGTYFYHGHL------GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 8 ~~GT~WYHsH~------~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
++||||||||. ..|+.+||+|+|||+++.+ ..+|+|++|+++||.
T Consensus 130 ~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~----~~~d~e~~l~~~~~~------------------------- 180 (299)
T 3t9w_A 130 TAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGD----LLPKRQFTVVFNDMM------------------------- 180 (299)
T ss_dssp CCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEEEEEEETTE-------------------------
T ss_pred CceeEEEecCCcccccchhhhcccccceEEEecccc----cCccccceeeeeeee-------------------------
Confidence 78999999994 3478999999999998764 457999999998774
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc--
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ-- 159 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~-- 159 (463)
+||+... ..+.+.++.|+++||||||++. ..+.|+|+||.|+|++.|+....
T Consensus 181 -~Ng~~~~------------------------~~p~l~v~~Ge~Vr~~liN~~~-~~HpfHlHGh~F~v~~~g~~~~~~~ 234 (299)
T 3t9w_A 181 -INNRAHH------------------------DAPTFEANLGERVEWIAIGHGS-NFHTFHLHGHRWLDNRTGMRTSEYD 234 (299)
T ss_dssp -ETTCCTT------------------------CCCEEEEETTCEEEEEEEEESS-CCCEEEETTCCEESSSSSSCCSTTC
T ss_pred -ecCcccc------------------------ccccceecCCCEEEEEEEeccc-cceeeeEecceEEEEecccccCCcC
Confidence 5666543 1136899999999999999996 55899999999999999988664
Q ss_pred -eeeEeeEEecCCceEEEEEecCC-CCCCceEEEEEecCCCCCCCCeEEEEEeC
Q 012467 160 -PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYH 211 (463)
Q Consensus 160 -P~~~~~l~i~~GeR~dvlV~~~~-~~~g~y~ir~~~~~~~~~~~~~~a~l~y~ 211 (463)
+..+|++.|.||||++++|.+.+ +.+|.|.+.-....- ......+++.+.
T Consensus 235 ~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H--~~~GM~~~f~V~ 286 (299)
T 3t9w_A 235 PSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNH--SDMGMAGMFLVR 286 (299)
T ss_dssp CCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHH--HHTTCEEEEEEE
T ss_pred CCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHH--HhcCCeEEEEEE
Confidence 34689999999999999987654 246888776543211 122345666665
No 44
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.86 E-value=2.1e-21 Score=185.91 Aligned_cols=145 Identities=15% Similarity=0.209 Sum_probs=114.0
Q ss_pred ceeEEEeccc------hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeEE
Q 012467 9 AGTYFYHGHL------GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTLL 82 (463)
Q Consensus 9 ~GT~WYHsH~------~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~l 82 (463)
+||||||||. ..|+.+||+|+|||+++.+ ...|+|++|+++|| +
T Consensus 109 ~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~----~~~drE~~l~l~~~--------------------------~ 158 (276)
T 3kw8_A 109 AGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDATHTIVFNDM--------------------------T 158 (276)
T ss_dssp CEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEEEEEEETT--------------------------E
T ss_pred CEEEEEecCccccccchhhhhCccEEEEEEecCCC----cccccceEEEeccc--------------------------c
Confidence 7999999996 4799999999999999865 22499999998775 5
Q ss_pred ECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc---
Q 012467 83 INGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ--- 159 (463)
Q Consensus 83 iNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~--- 159 (463)
|||+... ..+.|+++.|+++||||+|++. ..+.|+|+||.|.+++ ||....
T Consensus 159 iNG~~~~------------------------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f~v~~-~G~~~~p~~ 212 (276)
T 3kw8_A 159 INNRKPH------------------------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADNR-TGILTGPDD 212 (276)
T ss_dssp ETTCCTT------------------------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESSS-SSSCCSTTC
T ss_pred cceeccc------------------------CCCCEEEecCCEEEEEEecCCC-cceeEEEccceeEEec-cCccCCCcc
Confidence 8998753 1236899999999999999996 5899999999999875 775432
Q ss_pred -eeeEeeEEecCCceEEEEEecCC-CCCCceEEEEEecCCCCCCCCeEEEEEeC
Q 012467 160 -PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYH 211 (463)
Q Consensus 160 -P~~~~~l~i~~GeR~dvlV~~~~-~~~g~y~ir~~~~~~~~~~~~~~a~l~y~ 211 (463)
+...|++.|.||||+++++++++ +.+|.|++.-....- ......+.+.+.
T Consensus 213 ~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H--~~~GM~g~~~V~ 264 (276)
T 3kw8_A 213 PSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSH--SDMGMVGLFLVK 264 (276)
T ss_dssp CCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH--HHTTCEEEEEEE
T ss_pred cccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchH--hhCCCeEEEEEe
Confidence 45789999999999999999985 236899988653211 122345666665
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.85 E-value=8.3e-21 Score=186.23 Aligned_cols=233 Identities=13% Similarity=0.079 Sum_probs=144.4
Q ss_pred eEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
++|++++|+++|+|++|.... ..+.++++|. .+.||.+. ...|.|||++++.+++++ +|+||.+...
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~----~~~dG~~~------~~~i~PG~~~~y~f~~~~--~Gt~wyH~h~ 137 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAA----TGQGGGAA------ATFTAPGRTSTFSFKALQ--PGLYIYHCAV 137 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGTT------TTCBCTTEEEEEEEECCS--CEEEEEECCC
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCcc----ccCCCCCc------ceeecCCCEEEEEEECCC--CeEEEEEeCC
Confidence 479999999999999999753 4566777664 25788753 224899999999999986 6999998653
Q ss_pred cCCCCC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEE
Q 012467 195 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 273 (463)
Q Consensus 195 ~~~~~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~ 273 (463)
.....+ .....+.+.+.+.. .. |..+. . ....+..... ..... ......+............
T Consensus 138 ~~~~~~~~~Gl~G~~iV~~~~-------~~---p~~d~-e----~~l~~~d~~~-~~~~~-~~g~~~~~~~~~~~~~~~~ 200 (327)
T 1kbv_A 138 APVGMHIANGMYGLILVEPKE-------GL---PKVDK-E----FYIVQGDFYT-KGKKG-AQGLQPFDMDKAVAEQPEY 200 (327)
T ss_dssp SSHHHHHHTTCEEEEEEECTT-------CC---CCCSE-E----EEEEEEEECB-SSCTT-CCEEECBCHHHHHHTCCSE
T ss_pred CChhhhhhcceEEEEEEecCC-------CC---CCCce-E----EEEEeeeeec-cCccc-cccccccChhHhccCCCce
Confidence 210001 11223333333211 01 11110 0 0000000000 00000 0000000000000001124
Q ss_pred EEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCC
Q 012467 274 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 353 (463)
Q Consensus 274 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 353 (463)
+.|||..+... +...+.++.|++++|+|.|.+..
T Consensus 201 ~~iNG~~~~~~------------------------------------------~~~~l~v~~G~~vRlRliN~~~~---- 234 (327)
T 1kbv_A 201 VVFNGHVGALT------------------------------------------GDNALKAKAGETVRMYVGNGGPN---- 234 (327)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTEEEEEEEEEEESS----
T ss_pred EEEcCcccCCC------------------------------------------CceeEEeCCCCEEEEEEECCCCC----
Confidence 56666654210 00138899999999999998743
Q ss_pred CCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHhH-Hccceee
Q 012467 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF-HIGMGVV 432 (463)
Q Consensus 354 ~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H~-~~GM~~~ 432 (463)
..|+||||||.|+|++.. |.+ .+|.++|++.|.+|+++.|.|++++||.|++|||+..|. ..||+++
T Consensus 235 -~~~~~~l~Gh~f~vi~~D-G~~----------~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~ 302 (327)
T 1kbv_A 235 -LVSSFHVIGEIFDKVYVE-GGK----------LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQ 302 (327)
T ss_dssp -CCEEEEEETCCBSEEEGG-GSS----------CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEE
T ss_pred -CceeEEEeCCEEEEEEcC-CCc----------CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEE
Confidence 189999999999999984 332 226789999999999999999999999999999999995 8899888
Q ss_pred eec
Q 012467 433 LAL 435 (463)
Q Consensus 433 ~~~ 435 (463)
+..
T Consensus 303 l~~ 305 (327)
T 1kbv_A 303 LKV 305 (327)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 46
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.84 E-value=3.7e-22 Score=215.11 Aligned_cols=85 Identities=20% Similarity=0.419 Sum_probs=76.8
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|++|+|+|.|.+.+ .+.||||||||.|+|++.+ +.++||+.|+||+++.|+|+++
T Consensus 370 l~v~~Ge~vr~rliN~g~~----~~~H~fHlhGh~f~Vv~~d----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 370 LVMAQDQRIRWYLLSMGSN----ENIHSIHFSGHVFTVRKKE----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCSSSCEEEECCCCCSS----SCCCEEEBSSCCEECCSSS----------------CCEESEEECCTTCCCEEEECCS
T ss_pred eEEeCCCEEEEEEEeCCCC----cceEEEEEcCCEEEEEecC----------------CceeeEEEECCCeEEEEEEEeC
Confidence 6789999999999998643 2379999999999998763 2489999999999999999999
Q ss_pred CceeeeecccchHhHHccceeeeec
Q 012467 411 NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+||.|+||||+++|++.||++.|.+
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V 454 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLV 454 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCB
T ss_pred CCCceEEEecccccccccccccccc
Confidence 9999999999999999999999976
No 47
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.84 E-value=3e-20 Score=183.52 Aligned_cols=88 Identities=26% Similarity=0.337 Sum_probs=75.1
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC--ccceEEeCCCcEEEEEEE
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~v~~~g~~~irf~ 408 (463)
+.++.|++++|++.|.+.. .|++|+|||.|+|+. +|.+. +++ ++||+.|.+|+.+.|.|+
T Consensus 233 l~v~~G~r~Rl~n~~~~~~------~~~~~i~gh~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 233 LTAAVGERVLVVHSQANRD------TRPHLIGGHGDYVWA--TGKFR----------NPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT----------SCCEEEESCCCBCTTEEEEEEEE
T ss_pred eEcCCCCEEEEEECCCCCc------cceEEecCcceEEeC--CCccc----------CCccccceEEEeCCCceEEEEEE
Confidence 8899999999888877655 889999999999986 44432 223 479999999999999999
Q ss_pred cCCceeeeecccch-HhHHccceeeeecc
Q 012467 409 ADNPGAWAFHCHIE-PHFHIGMGVVLALG 436 (463)
Q Consensus 409 adnpG~w~~HCHi~-~H~~~GM~~~~~~~ 436 (463)
+++||.|+||||++ +|++.|||+.|.+.
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~ 323 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVT 323 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEEC
Confidence 99999999999999 59999999988643
No 48
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.83 E-value=1.9e-21 Score=209.64 Aligned_cols=158 Identities=15% Similarity=0.150 Sum_probs=116.6
Q ss_pred cccccc----------cceeEEEeccchh--hhhcceeeEEEEeCCCCCCC---CCCCCcceEEEEee------eecccH
Q 012467 2 LDVWQV----------QAGTYFYHGHLGM--QRSAGLYGSLIVDVADGEKE---PFHYDGEFNLLLSD------WWHRSV 60 (463)
Q Consensus 2 ~~~~~~----------~~GT~WYHsH~~~--q~~~Gl~G~lIV~~~~~~~~---p~~~d~e~~l~l~D------~~~~~~ 60 (463)
|+|.+. ++||||||||... |+.+||+|+|||+++..... +..+|+|++|++++ |+++..
T Consensus 253 Y~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~ 332 (770)
T 2r7e_B 253 YFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTEN 332 (770)
T ss_dssp EECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGG
T ss_pred EEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCCceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccc
Confidence 677777 8999999999665 89999999999999864210 12357999988754 555432
Q ss_pred HHHHhhhcCCC-------CCCCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEec
Q 012467 61 HEQEVGLSSRP-------LRWIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIAST 133 (463)
Q Consensus 61 ~~~~~~~~~~~-------~~~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa 133 (463)
... +...+ ..+....+..+|||+... . .+.+++++|++|||||+|+
T Consensus 333 ~~~---~~~~p~~~~~~d~~~~~~~~~~~ING~~~~--~----------------------~~~l~v~~Ge~vr~rliN~ 385 (770)
T 2r7e_B 333 MER---NCRAPCNIQMEDPTFKENYRFHAINGYIMD--T----------------------LPGLVMAQDQRIRWYLLSM 385 (770)
T ss_dssp GSS---CSCCSSCCCSSSSSSTTTSCEECTTSCTTT--T----------------------CCCCCCCSSSCEEEECCCC
T ss_pred hhh---cccCccccccCCccccccCCccccCCccCC--C----------------------CCCeEEeCCCEEEEEEEeC
Confidence 111 11000 011123455789998642 1 1357899999999999999
Q ss_pred Ccc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEE
Q 012467 134 TAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 134 ~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
+.. ..+.|+|+||.|+|++.||. .+|++.|.||||++|++++++ +|.|.+...
T Consensus 386 g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad~--pG~w~~hcH 439 (770)
T 2r7e_B 386 GSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPSK--AGIWRVECL 439 (770)
T ss_dssp CSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCSS--CBCCCBCCC
T ss_pred CCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeCC--CCceEEEec
Confidence 875 47899999999999999974 789999999999999999986 588776544
No 49
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.81 E-value=1.1e-19 Score=178.89 Aligned_cols=147 Identities=15% Similarity=0.203 Sum_probs=113.8
Q ss_pred cceeEEEeccc------hhhhhcceeeEEEEeCCCCCCCCCCCCcceEEEEeeeecccHHHHHhhhcCCCCCCCCCCCeE
Q 012467 8 QAGTYFYHGHL------GMQRSAGLYGSLIVDVADGEKEPFHYDGEFNLLLSDWWHRSVHEQEVGLSSRPLRWIGEPQTL 81 (463)
Q Consensus 8 ~~GT~WYHsH~------~~q~~~Gl~G~lIV~~~~~~~~p~~~d~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~d~~ 81 (463)
++||||||||. ..|+.+||+|+|||+++.+ ..+|+|++|+++||
T Consensus 149 ~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~----~~pd~e~~l~~~d~-------------------------- 198 (343)
T 3cg8_A 149 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD----VLPDATHTIVFNDM-------------------------- 198 (343)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC----CCCSEEEEEEEETT--------------------------
T ss_pred CceEEEEecCccccccchhhhhcCCeEEEEEecCCC----CCCCceEEEEcccc--------------------------
Confidence 35999999995 4799999999999998865 23689999999876
Q ss_pred EECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc--
Q 012467 82 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ-- 159 (463)
Q Consensus 82 liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~-- 159 (463)
+|||+..+ ..+.|.++.|++|||||+|.+. ..+.|+|+||.|+|+ .||.+..
T Consensus 199 ~iNG~~~~------------------------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f~v~-~~G~~~~p~ 252 (343)
T 3cg8_A 199 TINNRKPH------------------------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRWADN-RTGILTGPD 252 (343)
T ss_dssp EETTCCTT------------------------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCEESS-SSSSCCSTT
T ss_pred eecccCCC------------------------CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEEEEe-ccCcccCCC
Confidence 58998643 1136899999999999999996 689999999999997 4776543
Q ss_pred --eeeEeeEEecCCceEEEEEecCC-CCCCceEEEEEecCCCCCCCCeEEEEEeCC
Q 012467 160 --PFEVDDMDIYSGESYSVLLTTNQ-DPSYNYWISAGVRGRKPATPPALTLLNYHP 212 (463)
Q Consensus 160 --P~~~~~l~i~~GeR~dvlV~~~~-~~~g~y~ir~~~~~~~~~~~~~~a~l~y~~ 212 (463)
+...|++.|.||||++|++++++ +.+|.|++.-....- ......+.+.+.+
T Consensus 253 ~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H--~~~GM~g~~~V~~ 306 (343)
T 3cg8_A 253 DPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSH--SDMGMVGLFLVKK 306 (343)
T ss_dssp CCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHH--HHTTCEEEEEEEC
T ss_pred CcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHH--HhccCcEEEEEec
Confidence 35679999999999999999853 346888876553211 1233566777763
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.81 E-value=7.2e-19 Score=173.10 Aligned_cols=89 Identities=21% Similarity=0.171 Sum_probs=72.2
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC-ccceEEeCCCcEEEEEEEc
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP-LKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~-~rDTv~v~~~g~~~irf~a 409 (463)
+.++.|++++|++.|.+.. .|++++|||.|.|++ +|.+. ..|. ++||+.|.+|+.+.|.|++
T Consensus 227 l~v~~Ger~Rl~n~~~~~~------~~~h~i~~h~~~Vi~--dG~~~---------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 227 LKAKVGDNVLFVHSQPNRD------SRPHLIGGHGDLVWE--TGKFH---------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp EEEETTCEEEEEEEESSSC------BCEEEETCCEEEEET--TCCTT---------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred eEecCCCEEEEEECCCCCc------cccEEECCCCeEEEe--CCccc---------CCCccCcceEEECCCceEEEEEEc
Confidence 8899999999887776543 445557788888887 45542 1122 5899999999999999999
Q ss_pred CCceeeeecccchHhH-Hccceeeeecc
Q 012467 410 DNPGAWAFHCHIEPHF-HIGMGVVLALG 436 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~-~~GM~~~~~~~ 436 (463)
++||.|+||||++.|+ +.|||++|.+.
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~ 317 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVE 317 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEc
Confidence 9999999999999997 99999999654
No 51
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.76 E-value=5.2e-20 Score=198.07 Aligned_cols=156 Identities=15% Similarity=0.121 Sum_probs=111.3
Q ss_pred ccccccc----------ceeEEEeccch--hhhhcceeeEEEEeCCCCC---CCCCCCCcceEEEEee------eecccH
Q 012467 2 LDVWQVQ----------AGTYFYHGHLG--MQRSAGLYGSLIVDVADGE---KEPFHYDGEFNLLLSD------WWHRSV 60 (463)
Q Consensus 2 ~~~~~~~----------~GT~WYHsH~~--~q~~~Gl~G~lIV~~~~~~---~~p~~~d~e~~l~l~D------~~~~~~ 60 (463)
|+|.+.+ +||||||||.. .|+++||+|+|||+++.+. ..+..+|+|++|++++ |+++..
T Consensus 512 Y~f~~~~~agPg~~d~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~ 591 (742)
T 2r7e_A 512 YKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTEN 591 (742)
T ss_dssp CEEECCSTTSCCSSSCSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHH
T ss_pred EEEEeccccCCcccCCCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccc
Confidence 6777654 35999999954 4689999999999987531 1244668999999965 554332
Q ss_pred HHHHhhhcCCCCC-------CCCCCCeEEECCCCCCCCccccccCCCCccccccCCCCCCCceEEEecCCCeEEEEEEec
Q 012467 61 HEQEVGLSSRPLR-------WIGEPQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIAST 133 (463)
Q Consensus 61 ~~~~~~~~~~~~~-------~~~~~d~~liNG~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~g~~~RlRliNa 133 (463)
... +...+.. +.......+|||+... . . .+.+++|++|||||||+
T Consensus 592 ~~~---~~~~p~~v~~~~~~~~~~~~~~~ING~~~~--~---------------------~--~l~v~~Ge~vr~rliN~ 643 (742)
T 2r7e_A 592 IQR---FLPNPAGVQLEDPEFQASNIMHSINGYVFD--S---------------------L--QLSVCLHEVAYWYILSI 643 (742)
T ss_dssp HHH---HSSSSSCSCCCCHHHHGGGCCBCTTTTCSS--C---------------------C--CCCCCSSCCCEEEEEEC
T ss_pred hhh---cccCchhcccccccccccCceeeecCcCCC--C---------------------C--cEEEeCCCEEEEEEEeC
Confidence 111 1100000 0001123578998642 0 1 27899999999999998
Q ss_pred Ccc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 134 TAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 134 ~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+. ..+.|+|+||.|+|+ |..+|+|.|.||||++|+|++++ +|.|.+.....
T Consensus 644 g~~~~~h~~HlhGh~f~v~--------~~~~Dtv~l~Pg~~~~v~~~ad~--pG~w~~hcH~~ 696 (742)
T 2r7e_A 644 GAQTDFLSVFFSGYTFKHK--------MVYEDTLTLFPFSGETVFMSMEN--PGLWILGCHNS 696 (742)
T ss_dssp SSCCCCCCCEESSSCCCCB--------SSSBCSSCCCCCSSEECCEECCC--CCCSCCEECCC
T ss_pred CCCcceEEEEEcCcEEEEe--------ccceeEEEECCCcEEEEEEEcCC--CeEEEEEeCCc
Confidence 765 458999999999987 56789999999999999999986 58988876643
No 52
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.74 E-value=2.6e-17 Score=168.33 Aligned_cols=233 Identities=11% Similarity=0.062 Sum_probs=144.2
Q ss_pred eEEEecCCCeEEEEEEecCcc-eEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTAL-ASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~-~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
++|+++.|+++++||+|.... ..+.++++|+. ..||... ...|.||+++++.+++++ +|+||.....
T Consensus 60 p~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~~~y~f~~~~--~Gt~~yH~H~ 127 (442)
T 2zoo_A 60 SFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHTSTFNFKALN--PGLYIYHCAT 127 (442)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCEEEEEEECCS--CEEEEEECCC
T ss_pred CcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCEEEEEEEcCC--CeEEEEecCC
Confidence 479999999999999999642 46778888864 3677653 235899999999999975 7999998642
Q ss_pred cCCCCC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEE
Q 012467 195 RGRKPA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 273 (463)
Q Consensus 195 ~~~~~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~ 273 (463)
.....+ .....+.|.+++... . |.++ .++...+.......... .. ....+............
T Consensus 128 ~~~~~~~~~Gl~G~~iv~~~~~-------~---~~~d-----~e~~l~l~d~~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 190 (442)
T 2zoo_A 128 APVGMHIANGMYGLILVEPKEG-------L---APVD-----REYYLVQGDFYTKGEFG-EA-GLQPFDMAKAIDEDADY 190 (442)
T ss_dssp SSHHHHHHTTCEEEEEEECTTC-------C---CCCS-----EEEEEEEEEECBSSCTT-CC-EEECBCHHHHHTTCCSE
T ss_pred CChHHHHhCccEEEEEEeCCCC-------C---CCCC-----ceEEEEeeeeeccCccc-cc-ccccCChhHhccCCCCE
Confidence 111001 122344454442110 0 1100 00000000000000000 00 00000000000000123
Q ss_pred EEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCC
Q 012467 274 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 353 (463)
Q Consensus 274 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 353 (463)
+.|||..+... ....+.++.|++++|.|.|.+..
T Consensus 191 ~liNG~~~~~~------------------------------------------~~~~l~v~~G~~vrlrliN~~~~---- 224 (442)
T 2zoo_A 191 VVFNGSVGSTT------------------------------------------DENSLTAKVGETVRLYIGNGGPN---- 224 (442)
T ss_dssp EEETTSTTTTS------------------------------------------GGGCEEEETTCEEEEEEEEEESS----
T ss_pred EEECCCcCCCC------------------------------------------CCCceEeCCCCEEEEEEEeCCCC----
Confidence 45666543100 00137889999999999997643
Q ss_pred CCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchHh-HHccceee
Q 012467 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEPH-FHIGMGVV 432 (463)
Q Consensus 354 ~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~H-~~~GM~~~ 432 (463)
..|+||+||+.|.|++.. |.. ..|.+.|++.|.+|+...|.|++++||.|++|||...| ...||+++
T Consensus 225 -~~~~~~i~g~~~~vi~~D-G~~----------~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~ 292 (442)
T 2zoo_A 225 -LVSSFHVIGEIFDTVYVE-GGS----------LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAM 292 (442)
T ss_dssp -CCEEEEEETCCBSEEEGG-GSS----------CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEE
T ss_pred -CceeeEEcCCEEEEEecC-Ccc----------CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEE
Confidence 189999999999999984 432 12678999999999999999999999999999999999 58999988
Q ss_pred eec
Q 012467 433 LAL 435 (463)
Q Consensus 433 ~~~ 435 (463)
|..
T Consensus 293 l~v 295 (442)
T 2zoo_A 293 LKV 295 (442)
T ss_dssp EEE
T ss_pred EEe
Confidence 853
No 53
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.74 E-value=8.2e-17 Score=158.61 Aligned_cols=89 Identities=27% Similarity=0.332 Sum_probs=72.6
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCC--ccceEEeCCCcEEEEEE
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPP--LKNTAVIFPYGWTALRF 407 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~--~rDTv~v~~~g~~~irf 407 (463)
.+.++.|++++|+..+.+.. .+++++|||.|.|+. +|.+. +|+ +.||+.|++|+.+.+.|
T Consensus 226 ~l~v~~GervRlin~~~~~~------~~~~~i~gh~~~Vi~--DG~~~----------~p~~~~~dtv~i~pGer~dvlv 287 (336)
T 1oe1_A 226 ALTAKVGETVLLIHSQANRD------TRPHLIGGHGDWVWE--TGKFA----------NPPQRDLETWFIRGGSAGAALY 287 (336)
T ss_dssp CEEEETTCEEEEEEEESSSC------BCEEETTCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEE
T ss_pred ceEcCCCCEEEEEecCCCCc------cceEEECCcCceEeC--CCcCc----------CCccccceEEEECCCCcEEEEE
Confidence 48899999999866555443 566667999999995 55442 232 47999999999999999
Q ss_pred EcCCceeeeecccchHhH-Hccceeeeecc
Q 012467 408 VADNPGAWAFHCHIEPHF-HIGMGVVLALG 436 (463)
Q Consensus 408 ~adnpG~w~~HCHi~~H~-~~GM~~~~~~~ 436 (463)
++++||.|+||||.+.|. +.||+++|.+.
T Consensus 288 ~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~ 317 (336)
T 1oe1_A 288 TFKQPGVYAYLNHNLIEAFELGAAGHIKVE 317 (336)
T ss_dssp ECCSCEEEEEEESSHHHHHTTSCEEEEEEE
T ss_pred EcCCCceEEEEechhhccccCCCeEEEEEC
Confidence 999999999999999986 99999999654
No 54
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.26 E-value=1.5e-11 Score=125.28 Aligned_cols=218 Identities=17% Similarity=0.216 Sum_probs=131.5
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|++++|+++++|+.|.-. ....++.+|..+.- ..||.++ .|.|||+++..++++++..|+||......
T Consensus 47 P~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~-~~DG~~~--------~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~ 116 (439)
T 2xu9_A 47 PTLRVRPRDTVRLTLENRLP-EPTNLHWHGLPISP-KVDDPFL--------EIPPGESWTYEFTVPKELAGTFWYHPHLH 116 (439)
T ss_dssp CEEEECTTCEEEEEEEECSS-SCBCCEEETCCCCT-TTSCTTC--------CBCTTCEEEEEEECCSSCCEEEEEECCCT
T ss_pred CEEEEeCCCEEEEEEEECCC-CCcceEeCCCCCCc-cccCCcc--------cCCCCCeEEEEEecCCCCCcceEeccCCC
Confidence 58999999999999999975 34556666654322 5688642 38999999999998643579999987643
Q ss_pred CCC-CC-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEE
Q 012467 196 GRK-PA-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 273 (463)
Q Consensus 196 ~~~-~~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~ 273 (463)
... .+ .....+.|.+++.... . |. ...++++.+.+. .
T Consensus 117 ~~t~~q~~~Gl~G~liV~~~~~~------~---~~------------------------~~~~~e~~l~l~--------D 155 (439)
T 2xu9_A 117 GRVAPQLFAGLLGALVVESSLDA------I---PE------------------------LREAEEHLLVLK--------D 155 (439)
T ss_dssp TSHHHHHHTTCCEEEEECCGGGG------S---HH------------------------HHTSEEEEEEEE--------E
T ss_pred CchHHHHHhhCeEEEEEcCcccc------C---cc------------------------CCCCCcEEEEEE--------e
Confidence 211 01 1123344444421000 0 00 001233333332 1
Q ss_pred EEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCCC
Q 012467 274 WAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNL 353 (463)
Q Consensus 274 ~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~~ 353 (463)
|..+........ .+..+ .+.. +..+ .+.+ . ....+.++.| +++|.|.|.+...
T Consensus 156 ~~~~~~~~~~~~--~~~~~-~g~~--------~~~~----~iNG-------~-~~p~l~v~~g-~~RlRliN~~~~~--- 208 (439)
T 2xu9_A 156 LALQGGRPAPHT--PMDWM-NGKE--------GDLV----LVNG-------A-LRPTLVAQKA-TLRLRLLNASNAR--- 208 (439)
T ss_dssp ECEETTEECCCC--HHHHH-HCCC--------CSEE----EETT-------E-ESCEEECSSS-EEEEEEEECCSSC---
T ss_pred eeeCCCCcCCCC--ccccc-cCCC--------CCEE----EECC-------c-cCCcEEecCC-eEEEEEEecCCCc---
Confidence 333321000000 00000 0000 0000 0000 0 0124889999 9999999988652
Q ss_pred CCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchH
Q 012467 354 SEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEP 423 (463)
Q Consensus 354 ~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~ 423 (463)
.|.||+|||.|+|++. +|.+- ..|...|++.|.+|+...|.++++++|.|.++|+...
T Consensus 209 --~~~~~i~gh~~~vi~~-DG~~~---------~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l~~~~~~ 266 (439)
T 2xu9_A 209 --YYRLALQDHPLYLIAA-DGGFL---------EEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYD 266 (439)
T ss_dssp --CEEEEETTBCEEEEEE-TTEEE---------EEEEEESCEEECTTCEEEEEEECCSSEEEEEEEECCC
T ss_pred --eEEEEECCceEEEEec-CCCCC---------CCceEeceEEECCceeEEEEEEcCCCceEEEEecccc
Confidence 7999999999999998 44321 2356789999999999999999999999999998543
No 55
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.15 E-value=7.5e-11 Score=95.32 Aligned_cols=84 Identities=14% Similarity=0.104 Sum_probs=65.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+| .|.+.. .|+||+||..+... .|. +.. ....++..|.||+...++|.+
T Consensus 20 ~i~v~~Gd~V~~--~N~~~~------~H~v~~~~~~~~~~---~g~----~~~------~~~~~~~~i~pG~~~~~~f~~ 78 (105)
T 3cvb_A 20 NVTVHPGDTVKW--VNNKLP------PHNILFDDKQVPGA---SKE----LAD------KLSHSQLMFSPGESYEITFSS 78 (105)
T ss_dssp EEEECTTEEEEE--EECSSC------CEEEEECTTSSGGG---CHH----HHH------HHCEEEEECSTTCEEEEEECT
T ss_pred EEEEcCCCEEEE--EECCCC------CCeEEEeCCCCCcc---ccc----ccc------cccccccccCCCCeEEEEEec
Confidence 489999999976 477666 89999999876431 000 000 012578899999999999998
Q ss_pred -CCceeeeecccchHhHHccceeeeecc
Q 012467 410 -DNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 410 -dnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
++||.|.|||| .|...||.+.|.+.
T Consensus 79 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 79 DFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp TSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999988753
No 56
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.10 E-value=9.1e-11 Score=99.97 Aligned_cols=94 Identities=17% Similarity=0.255 Sum_probs=69.8
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEe------ecCC---CCCccccccCCCCCCCccceEEeCCC
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLG------RGEG---KFTKEDEKKFNLKNPPLKNTAVIFPY 400 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~------~g~g---~~~~~~~~~~n~~~p~~rDTv~v~~~ 400 (463)
.+.++.|++|+|+|.|.+.+. .|.||+|+....+.. ...+ .+.+. -....++||..|.+|
T Consensus 36 ~i~v~~G~~V~~~~~N~~~~~-----~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pG 104 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNSAVQ-----QHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGN 104 (139)
T ss_dssp EEEECTTCEEEEEEECCCSSC-----CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTT
T ss_pred eEEECCCCEEEEEEEeCCCCC-----CeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCC
Confidence 388999999999999987531 599999886531110 0000 11100 011257899999999
Q ss_pred cEEEEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 401 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 401 g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+...|.|++++||.|.||||+..|.. ||+..|.+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 99999999999999999999999999 99998865
No 57
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.05 E-value=2.8e-09 Score=111.57 Aligned_cols=230 Identities=10% Similarity=0.108 Sum_probs=134.4
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEE-EeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVV-EADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~vi-a~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|+++.|+++++++.|........++.+|..+.-- ..||++-. ..-.|.||+++...+++++ .|+||.....
T Consensus 34 P~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~~I~PG~s~tY~f~~~~--~GT~wYHsH~ 107 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASI----SQCAINPGETFFYNFTVDN--PGTFFYHGHL 107 (552)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECCS--CEEEEEEECS
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccc----ccCCcCCCCeEEEEEECCC--CEEEEEEECc
Confidence 589999999999999999864556667766432111 16888742 2345789999999999954 7999999875
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeec-------
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT------- 267 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~------- 267 (463)
... ......+.|..++.... ..| .+ .|+++.+.+....
T Consensus 108 ~~q--~~~Gl~G~liV~~~~~~-----~~~-~~---------------------------~d~e~~l~l~Dw~~~~~~~~ 152 (552)
T 1aoz_A 108 GMQ--RSAGLYGSLIVDPPQGK-----KEP-FH---------------------------YDGEINLLLSDWWHQSIHKQ 152 (552)
T ss_dssp TTT--GGGTCEEEEEEECCTTC-----CCS-SC---------------------------CSEEEEEEEEEECSSCHHHH
T ss_pred hhH--HhccCeeeEEEeCCccc-----CCC-CC---------------------------CCccceEEeecccCCCHHHH
Confidence 221 11223444444321110 000 00 0111111110000
Q ss_pred -----------cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 268 -----------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 268 -----------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
.+......|||..... ...... . ...... | ... + ........+.++.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~liNG~~~~~--c~~~~~-~-~~~~~~---------c-~~~--~-----~~~~~~~~~~v~~G 211 (552)
T 1aoz_A 153 EVGLSSKPIRWIGEPQTILLNGRGQFD--CSIAAK-Y-DSNLEP---------C-KLK--G-----SESCAPYIFHVSPK 211 (552)
T ss_dssp HHHTTSSSCCCCCSCSEEEETTBCCSS--SBTTGG-G-CTTSCB---------C-CCC--S-----CSTTSCCCEEECTT
T ss_pred HhhhhcccccCCCCCCeEEECCccccC--cccCcc-c-cccccc---------c-ccc--C-----CCCCCceEEEEcCC
Confidence 0001134677765210 000000 0 000000 0 000 0 00000014899999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC--cee
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN--PGA 414 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn--pG~ 414 (463)
++++|.|.|.+... .+-||++||.|+|++. +|.+ ..|...|++.|.+|++..|.+++++ +|.
T Consensus 212 ~~~RlRliNa~~~~-----~~~~~i~gh~~~vi~~-DG~~----------~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~ 275 (552)
T 1aoz_A 212 KTYRIRIASTTALA-----ALNFAIGNHQLLVVEA-DGNY----------VQPFYTSDIDIYSGESYSVLITTDQNPSEN 275 (552)
T ss_dssp CEEEEEEEECCSSC-----EEEEEETTCCEEEEEE-TTEE----------EEEEEESCEEECTTCEEEEEEECCSCTTCC
T ss_pred CEEEEEEEcccccc-----eEEEEEcCcEEEEEEE-CCcc----------cCceEEeEEEEcCCcEEEEEEEcCCCCCCC
Confidence 99999999987652 7899999999999998 4432 1356789999999999999999943 899
Q ss_pred eeecccchH
Q 012467 415 WAFHCHIEP 423 (463)
Q Consensus 415 w~~HCHi~~ 423 (463)
|.++|+...
T Consensus 276 y~i~~~~~~ 284 (552)
T 1aoz_A 276 YWVSVGTRA 284 (552)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEccc
Confidence 999999764
No 58
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.00 E-value=1.9e-09 Score=109.99 Aligned_cols=219 Identities=13% Similarity=0.112 Sum_probs=128.8
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|++++|+++++++.|... ....++.+|....- +.||.+ .-.|.|||+++..+++++ +.|+||-.....
T Consensus 50 P~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~~-~~DG~~-------~~~i~PG~~~~Y~f~~~~-~~GT~wYH~H~~ 119 (451)
T 2uxt_A 50 PTIRVWKGDDVKLIYSNRLT-ENVSMTVAGLQVPG-PLMGGP-------ARMMSPNADWAPVLPIRQ-NAATLWYHANTP 119 (451)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCEEEETCCCCG-GGSCSG-------GGCBCTTCEECCEEECCS-CSEEEEEEECCT
T ss_pred ceEEEeCCCEEEEEEEECCC-CCccEEECCccCCC-CCCCCC-------cCcCCCCCeEEEEEEcCC-CCcceEEecCCC
Confidence 58999999999999999984 44566666643221 379986 245789999999999986 579999988753
Q ss_pred CCCC-C-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEE
Q 012467 196 GRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTK 273 (463)
Q Consensus 196 ~~~~-~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~ 273 (463)
.... + .....+.|..++.... .. ..|. .-.++++.+.+. .
T Consensus 120 ~~t~~q~~~Gl~G~liV~~~~~~---~~---~~p~------------------------~y~~~e~~l~l~--------D 161 (451)
T 2uxt_A 120 NRTAQQVYNGLAGMWLVEDEVSK---SL---PIPN------------------------HYGVDDFPVIIQ--------D 161 (451)
T ss_dssp TTHHHHHHTTCEEEEEEECHHHH---HS---SSCC------------------------CBTTTEEEEEEE--------E
T ss_pred CchhhhHhhcceEEEEEecCccc---cc---CCCc------------------------cCCCceEEEEEE--------e
Confidence 3210 1 1223444444321000 00 0000 001223333322 1
Q ss_pred EEEeccc-CCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCC
Q 012467 274 WAINNVS-LTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 352 (463)
Q Consensus 274 ~~iNg~~-~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~ 352 (463)
|..+... ..... . ...+ + .+. .+.+.+. ....+.++.| +++|.|.|.+...
T Consensus 162 ~~~~~~~~~~~~~-~-------~~~~-~----~~d----~~liNG~--------~~p~~~v~~g-~~RlRliNa~~~~-- 213 (451)
T 2uxt_A 162 KRLDNFGTPEYNE-P-------GSGG-F----VGD----TLLVNGV--------QSPYVEVSRG-WVRLRLLNASNSR-- 213 (451)
T ss_dssp EEECTTSCEECCC-C-------SSSC-C----CCS----EEEETTE--------ESCEEEECSS-EEEEEEEECCSSC--
T ss_pred eecCCCCceeccc-c-------cCCC-C----cCC----EEEECCc--------ccceEEecCC-EEEEEEEccCCce--
Confidence 2221100 00000 0 0000 0 000 0000000 0124889999 9999999988652
Q ss_pred CCCCCCeee-cCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeeeecccchH
Q 012467 353 LSEIHPWHL-HGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWAFHCHIEP 423 (463)
Q Consensus 353 ~~~~HP~Hl-HG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~~HCHi~~ 423 (463)
.+.||| |||.|+|++. +|.+. ..|...|++.|.+|+...|.++++.+|.+.++++...
T Consensus 214 ---~~~~~i~dg~~~~vi~~-DG~~~---------~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~ 272 (451)
T 2uxt_A 214 ---RYQLQMNDGRPLHVISG-DQGFL---------PAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAA 272 (451)
T ss_dssp ---CEEEEETTSCCEEEEEC-SSSEE---------EEEEEESSEEECTTCEEEEEEECTTCCCEEEEC----
T ss_pred ---eEEEEECCCCeEEEEEe-CCCcc---------CCceEeceEEECceeEEEEEEEeCCCCEEEEEecCcc
Confidence 799999 9999999997 45431 2356789999999999999999998899999988654
No 59
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.95 E-value=9.8e-09 Score=105.61 Aligned_cols=224 Identities=11% Similarity=0.073 Sum_probs=131.2
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|+++.|+++++++.|.-.. ....++.+|-.+.- -..||.+-. ..-.|.||+++...+++++ ..|+||-
T Consensus 34 P~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~pI~PG~s~tY~f~~~~-~~GT~wY 108 (499)
T 3pxl_A 34 PLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI----NQCPISPGHSFLYDFQVPD-QAGTFWY 108 (499)
T ss_dssp CCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECSS-CCEEEEE
T ss_pred CeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc----ccCCCCCCCeEEEEEEcCC-CCceeee
Confidence 589999999999999998764 34556666654321 357887531 1236899999999999954 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCC
Q 012467 191 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 270 (463)
Q Consensus 191 r~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 270 (463)
....... ......+.|...+... +.+.....++.. ....+......... ... ... ..
T Consensus 109 HsH~~~q--~~~GL~G~lIV~~~~~------~~~~~~~~d~~~----~~l~l~Dw~~~~~~-~~~--------~~p--~~ 165 (499)
T 3pxl_A 109 HSHLSTQ--YCDGLRGPFVVYDPND------PHASRYDVDNDD----TVITLADWYHTAAK-LGP--------RFP--GG 165 (499)
T ss_dssp EECSTTG--GGGTCEEEEEEECTTC------TTGGGCSBCSGG----GEEEEEEECSSCTT-TSC--------SSC--SS
T ss_pred eccchhH--HhccceeEEEEcCCcc------cccccCCCCCce----EEEEEEcccCCccc-ccc--------CCC--CC
Confidence 8875321 1122334443331100 000000000000 00000000000000 000 000 00
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||....... .......+.++.|++++|.|.|.+..
T Consensus 166 ~d~~liNG~~~~~~~--------------------------------------~~~~~~~~~v~~G~~~RlRliNa~~~- 206 (499)
T 3pxl_A 166 ADATLINGKGRAPSD--------------------------------------SVAELSVIKVTKGKRYRFRLVSLSCN- 206 (499)
T ss_dssp CSEEEETTBCCCTTC--------------------------------------TTCCCCEEEECTTCEEEEEEEECCSS-
T ss_pred CcEEEECCCCcCCCC--------------------------------------CCCCcceEEEcCCCEEEEEEEecCCC-
Confidence 112455554211000 00011258999999999999998765
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCc-eeeeecccc
Q 012467 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-GAWAFHCHI 421 (463)
Q Consensus 351 ~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnp-G~w~~HCHi 421 (463)
..+.||++||.|+|++. +|.+ ..|...|++.|.+|++..|.++++.+ |.|.+.|..
T Consensus 207 ----~~~~~~i~gh~~~via~-DG~~----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 263 (499)
T 3pxl_A 207 ----PNHTFSIDGHNLTIIEV-DSVN----------SQPLEVDSIQIFAAQRYSFVLDANQAVDNYWIRANP 263 (499)
T ss_dssp ----CCEEEEETTBCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ----eeEEEEECCCeEEEEEE-CCcc----------cCceEeeeEEECCCcEEEEEEECCCCCceEEEEEec
Confidence 27999999999999998 4433 23567899999999999999999874 888888764
No 60
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.94 E-value=1.1e-08 Score=105.35 Aligned_cols=226 Identities=11% Similarity=0.073 Sum_probs=131.1
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|+++.|+++++++.|.-.. ....++.+|-.+.- -..||.+- +..-.|.||+.+...+++++ ..|+||-
T Consensus 35 P~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~----vtq~pI~PG~sftY~f~~~~-~~GT~wY 109 (495)
T 3t6v_A 35 PVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAF----ITQCPIIVGNSFSYNFNVPG-MAGTYWY 109 (495)
T ss_dssp CEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBT----TTBCCBCTTCEEEEEEECTT-CCEEEEE
T ss_pred CeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCc----cccCCCCCCCeEEEEEEeCC-CCceeee
Confidence 589999999999999998764 24556666654321 25788753 12235899999999999955 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCC
Q 012467 191 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 270 (463)
Q Consensus 191 r~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 270 (463)
....... ......+.|...+... +.+.....++.. ....+..... ..... + ..... ..
T Consensus 110 HsH~~~q--~~~GL~G~lIV~~~~~------~~~~~~~~d~~e----~~l~l~Dw~~--~~~~~----~--~~~~p--~~ 167 (495)
T 3t6v_A 110 HSHLTTQ--YCDGLRGPFVVYDPND------PDANLYDVDDDT----TIITLADWYH--VLAKE----M--GAGGA--IT 167 (495)
T ss_dssp EECSTTG--GGGTCEEEEEEECTTC------TTGGGCSBCSGG----GEEEEEEECS--SCGGG----S--CSSSC--CC
T ss_pred eccchhH--HhcCceEEEEEcCccc------cccccCCCCCce----eEEEEecccC--Cchhh----h--ccCCC--CC
Confidence 8875321 1122334443331100 000000000000 0000000000 00000 0 00000 00
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||...... . | .......+.++.|++++|.|.|.+..
T Consensus 168 ~d~~liNG~g~~~~-~-------------------~-----------------~~~~~~~~~v~~G~~~RlRliN~~~~- 209 (495)
T 3t6v_A 168 ADSTLIDGLGRTHV-N-------------------V-----------------AAVPLSVITVEVGKRYRMRLVSISCD- 209 (495)
T ss_dssp CSEEEETTBCCBSS-S-------------------C-----------------CCCCCCEEEECTTCEEEEEEEECCSS-
T ss_pred CcEEEECCcCcCCC-C-------------------c-----------------ccCCceEEEEcCCCEEEEEEEecCCC-
Confidence 11245555421100 0 0 00011258999999999999998764
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCc-eeeeecccc
Q 012467 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNP-GAWAFHCHI 421 (463)
Q Consensus 351 ~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnp-G~w~~HCHi 421 (463)
..+.||++||.|+|++. +|.+ ..|...|++.|.+|+...|-++++.+ |.|.++|..
T Consensus 210 ----~~~~~~i~gh~~~via~-DG~~----------~~P~~~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~ 266 (495)
T 3t6v_A 210 ----PNYDFSIDGHDMTIIET-DGVD----------SQELTVDEIQIFAAQRYSFVLNANQPVGNYWIRANP 266 (495)
T ss_dssp ----CCEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEE
T ss_pred ----eeEEEEECCCeEEEEEe-CCcc----------cCCEEeeeEEEcCceEEEEEEECCCCCceEEEEEec
Confidence 27999999999999998 4433 23567899999999999999999875 898898864
No 61
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.92 E-value=7.5e-09 Score=107.02 Aligned_cols=224 Identities=11% Similarity=0.109 Sum_probs=132.2
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|++++|+++++++.|.-.. ....++.+|-... --..||.+-. ..-.|.||++++..+++.+ ..|+||-
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~v----tq~~I~PG~~~~Y~f~~~~-~~GT~wY 108 (503)
T 1hfu_A 34 PLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGV----NQCPISPGHAFLYKFTPAG-HAGTFWY 108 (503)
T ss_dssp CEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEECCTT-CCEEEEE
T ss_pred CcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccc----ccCCcCCCCeEEEEEEeCC-CCccEEE
Confidence 489999999999999998862 4556666664331 1247887632 2234789999999999644 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCC
Q 012467 191 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 270 (463)
Q Consensus 191 r~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 270 (463)
...... .......+.|.+++.. . +.+. .+ +.. ..+....+....- ....... . + . .
T Consensus 109 H~H~~~--q~~~Gl~G~liV~~~~-~-----~~~~--~~-~~d-~~e~~l~l~Dw~~--~~~~~~~-~--~----~---~ 164 (503)
T 1hfu_A 109 HSHFGT--QYCDGLRGPMVIYDDN-D-----PHAA--LY-DED-DENTIITLADWYH--IPAPSIQ-G--A----A---Q 164 (503)
T ss_dssp EECSTT--GGGGTCEEEEEEECTT-C-----TTGG--GC-SBC-STTSEEEEEEECS--SCGGGCC-------------C
T ss_pred Eecchh--hhhCcceeeEEEcCCC-C-----Cccc--CC-CCC-CceEEEEEccccc--CChHHhc-C--C----C---C
Confidence 987532 1112334444443211 0 0000 00 000 0000000000000 0000000 0 0 0 0
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||.....-. + ......+.++.|++++|.|.|.+...
T Consensus 165 ~d~~liNG~~~~~~~--------------------~------------------~~~~~~~~v~~g~~~RlRliN~~~~~ 206 (503)
T 1hfu_A 165 PDATLINGKGRYVGG--------------------P------------------AAELSIVNVEQGKKYRMRLISLSCDP 206 (503)
T ss_dssp CSEEEETTBCCBTTC--------------------C------------------CCCCCEEEECTTCEEEEEEEECCSSC
T ss_pred CCEEEECcccccCCC--------------------C------------------CCcceEEEEcCCCEEEEEEEecCCcc
Confidence 113456665421000 0 00012589999999999999988652
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeeecccch
Q 012467 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 422 (463)
Q Consensus 351 ~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~w~~HCHi~ 422 (463)
.|.||++||.|.|++. +|.+ ..|...|++.|.+|+...|.++++. +|.|.++++..
T Consensus 207 -----~~~~~i~gh~~~vi~~-DG~~----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~ 263 (503)
T 1hfu_A 207 -----NWQFSIDGHELTIIEV-DGEL----------TEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPN 263 (503)
T ss_dssp -----CEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred -----cEEEEEcCceEEEEec-cCcc----------ccccccCeEEEcccceEEEEEEcCCCccceeeeeccc
Confidence 7999999999999997 3432 1356789999999999999999987 79898998754
No 62
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.91 E-value=1.4e-08 Score=105.43 Aligned_cols=230 Identities=11% Similarity=0.091 Sum_probs=132.5
Q ss_pred eEEEecCCCeEEEEEEecCcc----eEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEE
Q 012467 116 QILHVQPNKTYRLRIASTTAL----ASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 190 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~----~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~i 190 (463)
|+|++++|+++++++.|.-.. ....++.+|-... --..||.+-. ..-.|.||++++..++..+ ..|+||-
T Consensus 55 P~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v----tq~~I~PG~s~~Y~f~~~~-~~GT~wY 129 (521)
T 1v10_A 55 PLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFV----NQCPIIPNESFVYDFVVPG-QAGTYWY 129 (521)
T ss_dssp CCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTEEEEEEEECTT-CCEEEEE
T ss_pred CcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcce----eeCCcCCCCeEEEEEecCC-CCccEEE
Confidence 589999999999999999862 5556666664431 1236887631 2234789999999999644 4799999
Q ss_pred EEEecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCC
Q 012467 191 SAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTING 270 (463)
Q Consensus 191 r~~~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~ 270 (463)
...... .......+.|.+++.. . +.+. .+ +.. ..+....+.+..- .. +..+....... ...
T Consensus 130 H~H~~~--q~~~Gl~G~liV~~~~-~-----~~~~--~~-~~d-~~e~~l~l~D~~~--~~----~~~~~~~~~~~-~~~ 190 (521)
T 1v10_A 130 HSHLST--QYCDGLRGAFVVYDPN-D-----PHLS--LY-DVD-DASTVITIADWYH--SL----STVLFPNPNKA-PPA 190 (521)
T ss_dssp EECSTT--GGGGTCEEEEEEECTT-C-----TTGG--GC-SBC-SGGGEEEEEEECS--SC----CC-------CC-CSC
T ss_pred EeccCC--chhcCceEEEEEcCCc-c-----cccc--cC-CCC-CceeEEEEccccc--CC----HHHHhhccCCC-CCC
Confidence 887532 1112334444443211 0 0000 00 000 0000000000000 00 00000000000 000
Q ss_pred eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCC
Q 012467 271 FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIR 350 (463)
Q Consensus 271 ~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~ 350 (463)
.....|||..+.... ........+.++.|++++|.|.|.+...
T Consensus 191 ~d~~liNG~~~~~~~-------------------------------------~~~~~~~~~~v~~G~~~RlRliNa~~~~ 233 (521)
T 1v10_A 191 PDTTLINGLGRNSAN-------------------------------------PSAGQLAVVSVQSGKRYRFRIVSTSCFP 233 (521)
T ss_dssp CSEEEETTBCCCSSC-------------------------------------GGGSCCCEEEECTTCEEEEEEEECCSSC
T ss_pred CCEEEECCcccCCCC-------------------------------------CCCCCceEEEECCCCEEEEEEEecCCcc
Confidence 113456655321000 0000012589999999999999988652
Q ss_pred CCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeeecccch
Q 012467 351 PNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAFHCHIE 422 (463)
Q Consensus 351 ~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~w~~HCHi~ 422 (463)
.|.||++||.|.|++. +|.+ ..|...|++.|.+|+...|.++++. +|.|.++|+..
T Consensus 234 -----~~~~~i~gh~~~vi~~-DG~~----------~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~ 290 (521)
T 1v10_A 234 -----NYAFSIDGHRMTVIEV-DGVS----------HQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPS 290 (521)
T ss_dssp -----CEEEEETTCCEEEEEE-TTEE----------EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEES
T ss_pred -----cEEEEECCCeEEEEec-CCcc----------ccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccc
Confidence 7999999999999998 3432 1356789999999999999999987 69999999854
No 63
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.90 E-value=2.1e-08 Score=104.67 Aligned_cols=215 Identities=9% Similarity=0.007 Sum_probs=131.1
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeE-EEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|+++.|+++++++.|.-......++.+|-... --..||.+-. ..-.|.||+.+...+++++ .|+||-....
T Consensus 98 P~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~v----Tq~pI~PG~sftY~f~~~q--~GT~WYHsH~ 171 (580)
T 3sqr_A 98 PAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGV----TQCPIAPGDTLTYKFQVTQ--YGTTWYHSHF 171 (580)
T ss_dssp CCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECCC--CEEEEEEECS
T ss_pred ceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCcc----ccCCCCCCCeEEEEEECCC--CcceEEeecc
Confidence 5899999999999999987644455555554332 1367888632 2235899999999999976 6999998875
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEE-EEEeeeec------
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRL-TLLNTQNT------ 267 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~-~~~~~~~~------ 267 (463)
... ......+.|...+... ..+ |+++ .+.+....
T Consensus 172 ~~q--~~~GL~G~lIV~~p~~-----------~~y--------------------------D~d~~~l~l~Dw~~~~~~~ 212 (580)
T 3sqr_A 172 SLQ--YGDGLFGPLIINGPAT-----------ADY--------------------------DEDVGVIFLQDWAHESVFE 212 (580)
T ss_dssp TTG--GGGTCEEEEEEECCCS-----------SCC--------------------------SEEEEEEEEEEECSSCHHH
T ss_pred ccc--ccCcCEEEEEeeCccc-----------CCC--------------------------CccceEEEEEEEecCCHHH
Confidence 211 1122334443332100 000 0100 00000000
Q ss_pred ---------cCCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCE
Q 012467 268 ---------INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT 338 (463)
Q Consensus 268 ---------~~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (463)
........|||.....-. + .. + .+.........+.++.|++
T Consensus 213 ~~~~~~~~~~~~~d~~liNG~~~~~c~-~---------------~~-------~-------~~~~~~~~~~~~~v~~G~~ 262 (580)
T 3sqr_A 213 IWDTARLGAPPALENTLMNGTNTFDCS-A---------------ST-------D-------PNCVGGGKKFELTFVEGTK 262 (580)
T ss_dssp HHHHHTTSCCCCBSEEEETTBCCCCCT-T---------------CC-------C-------TTBCCCCCCCEEECCTTCE
T ss_pred HHHHHhccCCCCCceEEECCcccCCCc-c---------------cc-------c-------cccccCCCceeEEEcCCCE
Confidence 000112456665331100 0 00 0 0000001123689999999
Q ss_pred EEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ceeeee
Q 012467 339 VDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWAF 417 (463)
Q Consensus 339 v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~w~~ 417 (463)
++|+|+|.+... .+.||++||.|.|++. +|.+ ..|...|++.|.+|++..|.++++. +|.|.+
T Consensus 263 yRlRlINa~~~~-----~~~~~i~gh~~~VIa~-DG~~----------v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i 326 (580)
T 3sqr_A 263 YRLRLINVGIDS-----HFEFAIDNHTLTVIAN-DLVP----------IVPYTTDTLLIGIGQRYDVIVEANAAADNYWI 326 (580)
T ss_dssp EEEEEEECCSSC-----CEEEEETTCCEEEEEE-TTEE----------EEEEEESSEEECTTCEEEEEEECCSCSSEEEE
T ss_pred EEEEEEeccCCc-----eeeEEeCCceEEEEEe-CCcc----------CCceEeeEEEEccceEEEEEEEeCCCCCeEEE
Confidence 999999988652 7899999999999998 4433 2356789999999999999999986 677777
Q ss_pred cccc
Q 012467 418 HCHI 421 (463)
Q Consensus 418 HCHi 421 (463)
....
T Consensus 327 ~a~~ 330 (580)
T 3sqr_A 327 RGNW 330 (580)
T ss_dssp ECCC
T ss_pred EEec
Confidence 6554
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.89 E-value=2.4e-08 Score=104.49 Aligned_cols=207 Identities=10% Similarity=-0.002 Sum_probs=128.9
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeE-EEEeCCcccceeeEeeEEecC-CceEEEEEecCCCCCCceEEEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMV-VVEADGNYVQPFEVDDMDIYS-GESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~-via~DG~~v~P~~~~~l~i~~-GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
|+|++++|+++++++.|........++.+|-... --..||.+-. ..-.|.| |++++..+++++ .|+||-...
T Consensus 67 P~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~----tq~~I~P~G~~~~Y~f~~~q--~GT~wYH~H 140 (559)
T 2q9o_A 67 PNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGV----TECPIPPKGGQRTYRWRARQ--YGTSWYHSH 140 (559)
T ss_dssp CCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTT----TBCCBCTTTEEEEEEEECCS--CEEEEEEEC
T ss_pred CcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCcc----ccCccCCCCCeEEEEEECCC--CEEEEEEEc
Confidence 5899999999999999988555556666664331 1246888632 2234789 999999999886 699999887
Q ss_pred ecCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEE-EEEeeeecc----
Q 012467 194 VRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRL-TLLNTQNTI---- 268 (463)
Q Consensus 194 ~~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~-~~~~~~~~~---- 268 (463)
... .......+.|.+++... ..+ |+.+ .+.+.....
T Consensus 141 ~~~--q~~~Gl~G~liV~~~~~-----------~~~--------------------------d~d~~~l~l~Dw~~~~~~ 181 (559)
T 2q9o_A 141 FSA--QYGNGVVGTIQINGPAS-----------LPY--------------------------DIDLGVFPITDYYYRAAD 181 (559)
T ss_dssp STT--GGGGTCEEEEEEECCCS-----------SCC--------------------------SEEEEEEEEEEECSSCHH
T ss_pred ccc--hhcCCceEEEEecCCCc-----------CCC--------------------------cccceEEEEeccccCCHH
Confidence 521 11122344444432100 000 1111 111100000
Q ss_pred -----------CCeEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCC
Q 012467 269 -----------NGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNT 337 (463)
Q Consensus 269 -----------~~~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (463)
.......|||..... .. .. .....+.++.|+
T Consensus 182 ~~~~~~~~~~~~~~d~~liNG~~~~~-~~---------~~----------------------------g~~~~~~v~~g~ 223 (559)
T 2q9o_A 182 DLVHFTQNNAPPFSDNVLINGTAVNP-NT---------GE----------------------------GQYANVTLTPGK 223 (559)
T ss_dssp HHHHHHTTSCCCCBSEEEETTBCBCT-TT---------CC----------------------------BCCCEEEECTTC
T ss_pred HHhhhhhcCCCCccceeEECCccccC-cC---------CC----------------------------CCceEEEEcCCC
Confidence 000124455554210 00 00 001248899999
Q ss_pred EEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC-ceeee
Q 012467 338 TVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN-PGAWA 416 (463)
Q Consensus 338 ~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn-pG~w~ 416 (463)
+++|.|.|.+... .|.||++||.|.|++.. |.+ ..|...|++.|.+|+.+.|.++++. +|.+.
T Consensus 224 ~~RlRliNa~~~~-----~~~~~i~gh~~~vi~~D-G~~----------~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~ 287 (559)
T 2q9o_A 224 RHRLRILNTSTEN-----HFQVSLVNHTMTVIAAD-MVP----------VNAMTVDSLFLAVGQRYDVVIDASRAPDNYW 287 (559)
T ss_dssp EEEEEEEECCSSC-----CEEEEETTBCEEEEEET-TEE----------EEEEEESCEEECTTCEEEEEEECCSCSSEEE
T ss_pred EEEEEEEecCCCc-----eEEEEECCCceEEEecC-Ccc----------cCceEeCeEEEccEEEEEEEEECCCCCCcEE
Confidence 9999999988652 78999999999999983 432 1356789999999999999999986 67766
Q ss_pred ecccc
Q 012467 417 FHCHI 421 (463)
Q Consensus 417 ~HCHi 421 (463)
+....
T Consensus 288 i~a~~ 292 (559)
T 2q9o_A 288 FNVTF 292 (559)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 65554
No 65
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.86 E-value=4.8e-09 Score=84.74 Aligned_cols=84 Identities=19% Similarity=0.193 Sum_probs=63.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|.||+|+..+.. . .|. +... ...|++.+.+|+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~~~------~H~~~~~~~~~~~-~--~g~----~~~~------~~~~~~~~~pG~~~~~~f~~ 79 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNKVP------PHNVVFDAALNPA-K--SAD----LAKS------LSHKQLLMSPGQSTSTTFPA 79 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CCCBEECSSSSTT-C--CHH----HHHH------HCBCSCCCSTTCEEEEECCT
T ss_pred EEEECCCCEEEEE--ECCCC------CceEEEeCCCCcc-c--ccc----cchh------ccccceeeCCCCEEEEEEec
Confidence 4889999999886 77655 8999999865421 0 010 0000 11467788999999999988
Q ss_pred -CCceeeeecccchHhHHccceeeeecc
Q 012467 410 -DNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 410 -dnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
+.||.|.|||| .|.++||.+.|.+.
T Consensus 80 ~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 80 DAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp TCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 78999999999 89999999988653
No 66
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.76 E-value=1.4e-08 Score=86.45 Aligned_cols=95 Identities=22% Similarity=0.287 Sum_probs=69.3
Q ss_pred EEccCCCEEEEEEEe--CCCCCCCCCCCCCeeecCC--ceEEEe-e----c-CCCCCccccccCCCCCCCccceEEeCCC
Q 012467 331 YMLGLNTTVDVILQN--ANAIRPNLSEIHPWHLHGH--DFWVLG-R----G-EGKFTKEDEKKFNLKNPPLKNTAVIFPY 400 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N--~~~~~~~~~~~HP~HlHG~--~f~vl~-~----g-~g~~~~~~~~~~n~~~p~~rDTv~v~~~ 400 (463)
++++.|++|+|++.| .+.+ .|.||++.. .+.-+. . + ...|.+. .-....+++|..|.+|
T Consensus 35 i~v~~G~tV~~~~~N~~~~~~------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 35 LSLPANTVVRLDFVNQNNLGV------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPP-----PDTPNALAWTAMLNAG 103 (140)
T ss_dssp EEEETTCEEEEEEEECCSSCC------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC-----TTCTTEEEECCCBCTT
T ss_pred EEECCCCEEEEEEECCCCCCC------ceeEEEeccCcchhhhhhhhhhhcccccccCc-----cccccccccceeeCCC
Confidence 899999999999999 5555 899999853 121100 0 0 0001000 0001246789999999
Q ss_pred cEEEEEEEcCCceeeeecccchHhHHccceeeeecc
Q 012467 401 GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 436 (463)
Q Consensus 401 g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~ 436 (463)
....+.|.++.||.|.|||++..|...||.+.|.+.
T Consensus 104 ~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 104 ESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred ceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999988764
No 67
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.76 E-value=8e-08 Score=99.88 Aligned_cols=218 Identities=13% Similarity=0.148 Sum_probs=128.1
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEE-EEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEe
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVV-VEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV 194 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~v-ia~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~ 194 (463)
|+|++++|+++++++.|.-......++.+|-.+.. -..||.+-. ..-.|.||++++..+++++ ..|+||-....
T Consensus 34 P~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~v----tq~pI~PG~~~~Y~f~~~~-~~GT~wYH~H~ 108 (534)
T 1zpu_A 34 PDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFL----TQCPIAPGSTMLYNFTVDY-NVGTYWYHSHT 108 (534)
T ss_dssp CCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTT----TBCCBCTTCEEEEEEECSS-CCEEEEEECCS
T ss_pred ccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcc----ccCCcCCCCeEEEEEEeCc-cceeEEEEEcC
Confidence 58999999999999999886455566666644321 257887631 1234889999999999985 47999998765
Q ss_pred cCCCCCCCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccCCeEEE
Q 012467 195 RGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKW 274 (463)
Q Consensus 195 ~~~~~~~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~ 274 (463)
... ......+.|..++.. . |. ..|+++.+.+.. |
T Consensus 109 ~~q--~~~Gl~G~liV~~~~------~-----p~-------------------------~~d~e~~l~l~D--------w 142 (534)
T 1zpu_A 109 DGQ--YEDGMKGLFIIKDDS------F-----PY-------------------------DYDEELSLSLSE--------W 142 (534)
T ss_dssp SSG--GGGTCEEEEEEECTT------C-----CS-------------------------CCSEEEEEEEEE--------E
T ss_pred ccc--ccCcceeeEEeCCCC------C-----CC-------------------------CCcceEEEEeec--------c
Confidence 321 112233444443210 0 00 112333333221 2
Q ss_pred EEecccCCCCCCCCccccc--cCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCCCEEEEEEEeCCCCCCC
Q 012467 275 AINNVSLTLPPTPYLGSIK--YGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 352 (463)
Q Consensus 275 ~iNg~~~~~p~~p~l~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~vl~N~~~~~~~ 352 (463)
..+... .++.... +...+ ....+. .+ ..+.. ....+.++.|++++|.|.|.+...
T Consensus 143 ~~~~~~------~~~~~~~~~~~~~g---~~~~~d----~~-liNG~-------~~~~~~v~~g~~~RlRliNa~~~~-- 199 (534)
T 1zpu_A 143 YHDLVT------DLTKSFMSVYNPTG---AEPIPQ----NL-IVNNT-------MNLTWEVQPDTTYLLRIVNVGGFV-- 199 (534)
T ss_dssp CSSCHH------HHHHHHSSTTCTTC---CCCCCS----EE-EETTB-------SSCEEECCSSCEEEEEEEECCSSC--
T ss_pred ccCCHH------HHHHHHhccccCCC---CCCCCc----eE-EECCC-------CceEEEEECCCEEEEEEEeccCCc--
Confidence 111000 0000000 00000 000000 00 00000 012589999999999999988652
Q ss_pred CCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC--ceeeeecccc
Q 012467 353 LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN--PGAWAFHCHI 421 (463)
Q Consensus 353 ~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn--pG~w~~HCHi 421 (463)
.+-||++||.|.|++. +|.+. .|...|++.|.+|+...|.+++++ .|.+.++...
T Consensus 200 ---~~~~~i~gh~~~vi~~-DG~~~----------~P~~~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~ 256 (534)
T 1zpu_A 200 ---SQYFWIEDHEMTVVEI-DGITT----------EKNVTDMLYITVAQRYTVLVHTKNDTDKNFAIMQKF 256 (534)
T ss_dssp ---CEEEEETTBCEEEEEE-TTEEE----------EEEEESCEEECTTCEEEEEEECCSCSSCCEEEEEEE
T ss_pred ---eEEEEEcCCeeEEEec-cCcCc----------cccEeceEEECccceEEEEEEcCCCCCCcEEEEEec
Confidence 7899999999999998 44331 356679999999999999999975 3666666654
No 68
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.64 E-value=3.4e-07 Score=93.56 Aligned_cols=197 Identities=15% Similarity=0.151 Sum_probs=126.1
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|+++.|+++++|+.|.-. ....++.+|-... -+.||.+ .-.|.||++++..+++++...|+||-.....
T Consensus 82 PtIr~~~Gd~v~v~v~N~l~-~~tsiHwHGl~~~-~~~DG~p-------q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~ 152 (481)
T 3zx1_A 82 PKIEVFEGDKLEILVKNKLK-EATTIHWHGVPVP-PDQDGSP-------HDPILAGEERIYRFEIPQDSAGTYWYHPHPH 152 (481)
T ss_dssp CBEEEETTCEEEEEEEECSS-SCBCCEEETCCCC-GGGSCCT-------TSCBCTTCEEEEEEECCTTCCEEEEEECCCT
T ss_pred ceEEEECCcEEEEEEEeCCC-CCeeEEecCcccC-CccCCCc-------cCcCCCCCeEEEEEeCCCCCCceEEEeecCC
Confidence 58999999999999999864 4456666665432 2578875 2368999999999999875578999987643
Q ss_pred CCCC-C-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeecc--CC-
Q 012467 196 GRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTI--NG- 270 (463)
Q Consensus 196 ~~~~-~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~--~~- 270 (463)
.... + .....+.|.+++.... . ... ++.+ +.+..... ++
T Consensus 153 ~~t~~q~~~GL~G~lIV~~~~~~---~---~~~-----------------------------~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 153 YTASKQVFMGLAGAFVIKAKKDA---L---SHL-----------------------------KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp TTHHHHHHTTCCEEEEEECSSCT---T---TTS-----------------------------EEEE-EEEEEECCBTTSC
T ss_pred CcchhhhhccceEEEEEcCcccc---c---cCC-----------------------------Ccee-EEEEEEeccCCCc
Confidence 2111 1 1122233333321100 0 000 0011 11100000 00
Q ss_pred --------------eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 271 --------------FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 271 --------------~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
.....|||..+ ..+.++.|
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~~-----------------------------------------------p~l~v~~g 229 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQFK-----------------------------------------------PKIKLATN 229 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEES-----------------------------------------------CEEEEETT
T ss_pred cccccchhhccCCcCCEEEECCccC-----------------------------------------------ceEEecCC
Confidence 01123333321 14788999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCCceeee
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADNPGAWA 416 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adnpG~w~ 416 (463)
+ +|.|.|.+... .+.||++||.|.||+...|.. ..|...|++.|.+|+.+.|-++++.+|.|.
T Consensus 230 ~--RlRliNa~~~~-----~~~l~i~g~~~~vIa~DGg~~----------~~P~~~~~l~l~pgeR~dvlv~~~~~~~~~ 292 (481)
T 3zx1_A 230 E--RIRIYNATAAR-----YLNLRIQGAKFILVGTDGGLI----------EKTIYKEELFLSPASRVEVLIDAPKDGNFK 292 (481)
T ss_dssp E--EEEEEECCSSC-----CEEEEETTCEEEEEEETTEEE----------EEEEEESSEEECTTCEEEEEEECSSCEEEE
T ss_pred C--EEEEEecCCCe-----EEEEEECCCceEEEEcCCCcc----------CCceEeCeEEECCccEEEEEEEcCCCcEEE
Confidence 9 99999987652 799999999999999843332 235667999999999999999999999999
Q ss_pred ecccc
Q 012467 417 FHCHI 421 (463)
Q Consensus 417 ~HCHi 421 (463)
+-++.
T Consensus 293 l~~~~ 297 (481)
T 3zx1_A 293 LESAY 297 (481)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88764
No 69
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.63 E-value=2.7e-08 Score=79.07 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=59.3
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.|+ |.+.. .|.||+|+..+- +. +... ...|++.+.+|+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~p--g~--------~~~~------~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNKLS------PHNIVFDADGVP--AD--------TAAK------LSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECCSSSC--HH--------HHHH------HCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCCCC--cc--------cccc------ccccccccCCCCEEEEEc--
Confidence 4899999999987 66655 899999875421 10 0000 115788999999988877
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|..+||.+.|.+
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 78999999999 7999999998865
No 70
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.59 E-value=1.1e-07 Score=75.35 Aligned_cols=79 Identities=14% Similarity=0.213 Sum_probs=59.9
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+| .|.+.. .|.||+|+..+- ..++. ...++|++.+.+|+...++|
T Consensus 19 ~i~v~~G~~V~~--~n~~~~------~H~~~~~~~~~p------~~~~~---------~~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNAGF------PHNIVFDEDAIP------SGVNA---------DAISRDDYLNAPGETYSVKL-- 73 (98)
T ss_dssp EEEECTTCEEEE--EECSSC------CEEEEECGGGSC------TTCCH---------HHHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCCC------Ccccc---------ccccccceecCCCCEEEEEe--
Confidence 488999999987 577666 899999975320 01110 00246889999999988876
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||| .|.++||.+.|.+
T Consensus 74 ~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 74 TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred CCCeEEEEEcC--CccccCCeEEEEE
Confidence 58999999999 7999999998865
No 71
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.50 E-value=2.7e-07 Score=72.02 Aligned_cols=71 Identities=20% Similarity=0.303 Sum_probs=56.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|.|+ |.+.. .|.+|+|+.. . ...++..+.+|+...+.|
T Consensus 20 ~i~v~~Gd~V~~~--n~~~~------~H~v~~~~~~---------~--------------~~~~~~~~~~g~~~~~~f-- 66 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNKLA------PHNVVVEGQP---------E--------------LSHKDLAFSPGETFEATF-- 66 (91)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEETTCG---------G--------------GCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CcEEEEeCCC---------c--------------cCcccceeCCCCEEEEEe--
Confidence 4889999999886 66545 8999998721 0 124677889999887776
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|...||.+.+.+
T Consensus 67 ~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 67 SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 88999999999 8999999988764
No 72
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.47 E-value=2.5e-07 Score=94.08 Aligned_cols=198 Identities=12% Similarity=0.128 Sum_probs=122.8
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|++++|+++++++.|.-. ....++.+|-... -+.||.+- -.|.||+.++..+++++ ..|+||-.....
T Consensus 38 P~i~~~~Gd~v~v~~~N~l~-~~tsiHwHG~~~~-~~~DG~~~-------~~i~PG~~~~Y~f~~~~-~~GT~wYH~H~~ 107 (448)
T 3aw5_A 38 PTIILRRGQRVDMTLKNKLT-EPTIVHWHGFDVN-WHNDAHPS-------FAITPGESYNYSFDVVN-RAGTYLYHPHPH 107 (448)
T ss_dssp CEEEEETTCEEEEEEEECSS-SCBCEEEETCCCC-HHHHTCGG-------GCBCTTCEEEEEEECCS-CSEEEEEEECCT
T ss_pred ceEEEeCCCEEEEEEEECCC-CceeEEeCCccCC-CccCCCCC-------ccCCCCCEEEEEEEcCC-CCCceEeccCCC
Confidence 58999999999999999874 4456666665432 24688775 45789999999999986 479999988743
Q ss_pred CCCC-C-CCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCcccccccccccccCCCCCCCCccceEEEEEeeeeccC-C--
Q 012467 196 GRKP-A-TPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTIN-G-- 270 (463)
Q Consensus 196 ~~~~-~-~~~~~a~l~y~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~-~-- 270 (463)
.... + .....+.|..++.... . ..| +. .+++.+.+.....+ +
T Consensus 108 ~~~~~q~~~Gl~G~liV~~~~~~------~-~l~-~d-------------------------~~e~~l~l~D~~~~~~~~ 154 (448)
T 3aw5_A 108 GLTAKQFYMGQLGLVIVEDSGSD------L-GFK-YG-------------------------VNDLPLVISDRRFIGGAP 154 (448)
T ss_dssp TTHHHHHHTTCCEEEEEECTTTT------T-TCC-BT-------------------------TTEEEEEEEEEEEETTEE
T ss_pred CchHHHHhccceEEEEEeCCccc------c-CCC-CC-------------------------CceEEEEEEeeccCCCcc
Confidence 2211 1 1122333333321100 0 000 00 02222222110000 0
Q ss_pred --------------eEEEEEecccCCCCCCCCccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCccccceEEEccCC
Q 012467 271 --------------FTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLN 336 (463)
Q Consensus 271 --------------~~~~~iNg~~~~~p~~p~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 336 (463)
.....|||..+ ..+.++.|
T Consensus 155 ~~~~~~~~~~~~~~~~~~liNG~~~-----------------------------------------------p~~~v~~g 187 (448)
T 3aw5_A 155 VYNPTPMEMIAGFLGNAVLVNGVKD-----------------------------------------------AVFKLSGG 187 (448)
T ss_dssp ECCCCHHHHHHCCCCSEEEETTEET-----------------------------------------------CEEEEEEE
T ss_pred cccccccccccCccccEEEECCccc-----------------------------------------------ceEEECCC
Confidence 01122222211 14889999
Q ss_pred CEEEEEEEeCCCCCCCCCCCCCeee--cC---CceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcCC
Q 012467 337 TTVDVILQNANAIRPNLSEIHPWHL--HG---HDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVADN 411 (463)
Q Consensus 337 ~~v~~vl~N~~~~~~~~~~~HP~Hl--HG---~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~adn 411 (463)
+++|.|.|.+... .+.||+ +| |.|+|++. +|.+- ..|...|++.|.+|+.+.|.++++
T Consensus 188 -~~RlRliNa~~~~-----~~~~~i~~~~~~~~~~~via~-DG~~~---------~~P~~~~~l~l~pgeR~dvlv~~~- 250 (448)
T 3aw5_A 188 -SYRLRLVNGSNAR-----LYMLSIVKKNGDVVPMRLIAV-DQGFL---------ARPIEVRALFLAPAERAEVVVELG- 250 (448)
T ss_dssp -EEEEEEEECSSSC-----CEEEEEEETTSCEECEEEEEE-TTEEE---------EEEEEESCEEECTTCEEEEEEEEC-
T ss_pred -eEEEEEEcCCCcc-----eEEEEEEcCCCCCccEEEEEe-CCCcc---------CCceEeceEEECCcceEEEEEECC-
Confidence 9999999988652 799999 99 99999998 44332 124567999999999999999987
Q ss_pred ceeeeeccc
Q 012467 412 PGAWAFHCH 420 (463)
Q Consensus 412 pG~w~~HCH 420 (463)
.|.|.+..+
T Consensus 251 ~~~y~l~~~ 259 (448)
T 3aw5_A 251 EGVYLLKNT 259 (448)
T ss_dssp SEEEEEEEC
T ss_pred CCceEEEcc
Confidence 466444444
No 73
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.45 E-value=7.5e-08 Score=76.29 Aligned_cols=77 Identities=18% Similarity=0.272 Sum_probs=58.3
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|.+++++..+. .+. . ....++..+.+|+...+.|
T Consensus 20 ~i~v~~G~~V~~~--n~~~~------~H~~~~~~~~~~-----~~~------~------~~~~~~~~~~~g~~~~~tf-- 72 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKVG------PHNVIFDKVPAG-----ESA------P------ALSNTKLAIAPGSFYSVTL-- 72 (97)
T ss_dssp EEEECTTCEEEEE--ECSSC------CCCBEEEECCTT-----SCH------H------HHCBCCCCCSCSCCEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CeEEEEeCCCCc-----ccc------c------cccccceecCCCCEEEEEe--
Confidence 3899999998886 66655 899999876541 000 0 0114677788998888876
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|.++||.+.+.+
T Consensus 73 ~~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 73 GTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp CSCSEEEEECS--STTTTTCEEEEEE
T ss_pred CCCeEEEEEcc--ChhhcCCEEEEEE
Confidence 89999999999 8999999988865
No 74
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.38 E-value=6.5e-07 Score=71.04 Aligned_cols=81 Identities=14% Similarity=0.179 Sum_probs=59.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+| .|.+.. .|.||+++..|. .| ++.. .. ...+|++.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~~~~~~~~~p-----~g-~~~~-~~------~~~~~~~~~~~G~~~~~~f-- 74 (99)
T 1byp_A 18 DLSIASGEKITF--KNNAGF------PHNDLFDKKEVP-----AG-VDVT-KI------SMPEEDLLNAPGEEYSVTL-- 74 (99)
T ss_dssp EEEECTTEEEEE--EECSSC------CBCCEECTTSSC-----TT-CCHH-HH------SCCTTCCBCSTTCEEEEEE--
T ss_pred EEEECCCCEEEE--EECCCC------cceEEEeCCCCc-----cc-cccc-cc------cccccceeeCCCCEEEEEe--
Confidence 488999999887 577666 899999986441 01 1100 00 0125667889999888877
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|.++||.+.|.+
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 75 TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCcEEEEEcC--CccccCCEEEEEE
Confidence 59999999999 8999999998865
No 75
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.35 E-value=1.4e-06 Score=69.28 Aligned_cols=71 Identities=15% Similarity=0.282 Sum_probs=58.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|++.|.+.. .|.|.+.+..+ ...+.+|....+.|++
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~------~H~~~~~~~~~---------------------------~~~~~pg~~~~~~~t~ 75 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKS------EHTFTIKKLGI---------------------------DVVVESGKEKNITVKP 75 (100)
T ss_dssp EEEECTTSCEEEEEEECSSS------CEEEEEGGGTE---------------------------EEEECTTCEEEEEECC
T ss_pred EEEECCCCEEEEEEEcCCCc------eEEEEEecCCc---------------------------ceeecCCcceeEEEec
Confidence 38999999999999998765 67766544322 2346788999999999
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|+|. .|...||.+.+.+
T Consensus 76 ~~~G~Y~y~C~--~H~~~gM~G~i~V 99 (100)
T 4hci_A 76 KSAGTYELICR--YHLLKGMEGKVIV 99 (100)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred ccCceEEEECc--cccCCCCEEEEEE
Confidence 99999999997 6999999988765
No 76
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.34 E-value=1.5e-06 Score=70.72 Aligned_cols=72 Identities=19% Similarity=0.337 Sum_probs=56.5
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|++.|.+.. .|-|++... .-+..+.||+...+.|.+
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~------~H~~~i~~~---------------------------~~~~~i~pG~~~~~~f~~ 85 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPI------SEGFSIDAF---------------------------GVQEVIKAGETKTISFTA 85 (112)
T ss_dssp EEEEETTCEEEEEEEECSSS------CEEEEEGGG---------------------------TEEEEECTTCEEEEEEEC
T ss_pred EEEEeCCCEEEEEEEECCCC------eEEEEEcCC---------------------------CceeEeCCCCEEEEEEEC
Confidence 38999999999999998754 455544321 125678999999999999
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
++||.|.||||+..|... |.+.+.+
T Consensus 86 ~~~G~y~~~C~~~~~~~~-M~g~i~V 110 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNIH-LPGTLNV 110 (112)
T ss_dssp CSCEEEEEBCSSSCTTTB-CCEEEEE
T ss_pred CCCEEEEEECCCCCchHH-CEEEEEE
Confidence 999999999998877543 8777754
No 77
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.25 E-value=6.3e-06 Score=85.52 Aligned_cols=70 Identities=10% Similarity=0.063 Sum_probs=53.3
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEec
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVR 195 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~ 195 (463)
|+|.++.|+++++|+.|.... ...++.+|-...- ..||.+-. .|.||++++..+++++ .+|+||-.....
T Consensus 69 PtI~~~~Gd~v~v~v~N~l~~-~tsiHwHGl~~~~-~~DG~~~~-------~i~PG~~~~Y~f~~~~-~~GT~WYH~H~~ 138 (534)
T 3abg_A 69 PTFQVPRGVETVVRFINNAEA-PNSVHLHGSFSRA-AFDGWAED-------ITEPGSFKDYYYPNRQ-SARTLWYHDHAM 138 (534)
T ss_dssp EEEEEETTCCEEEEEEECSSS-CBCEEEETCCCCT-TTTTCSSS-------CBSSCSCCCEEECCCS-SSCEEEEEECCT
T ss_pred ceEEEeCCcEEEEEEEECCCC-CceEEECCCcCCC-CCCCCCCC-------CCCCCCeEEEEEecCC-cceeEEEecCcc
Confidence 689999999999999999753 4556666643221 47886422 3789999999998887 578999988754
No 78
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.25 E-value=1.4e-06 Score=69.53 Aligned_cols=83 Identities=17% Similarity=0.183 Sum_probs=57.4
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCc-cceEEeCCCcEEEEEEE
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPL-KNTAVIFPYGWTALRFV 408 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~-rDTv~v~~~g~~~irf~ 408 (463)
.+.++.|++|+|+ |.+.. .|.++++.-... .+.+. .... .+.+ .+++.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~~--n~~~~------~H~~~~~~~~~~-----~~~~~--~~~~----~~~~~~~~~~~~pG~~~~~tf- 77 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVGET------GHNIVFDIPAGA-----PGTVA--SELK----AASMDENDLLSEDEPSFKAKV- 77 (102)
T ss_dssp EEEECTTCCEEEE--ECSSS------CBCCEECCCTTC-----CHHHH--HHHH----HTSCCTTCCBBTTBCEEEECC-
T ss_pred EEEECCCCEEEEE--ECCCC------CeEEEEeCcccc-----ccccc--chhh----cccccccceecCCCCEEEEEe-
Confidence 4899999999876 76655 899998731110 00000 0000 0122 4677888999888876
Q ss_pred cCCceeeeecccchHhHHccceeeeec
Q 012467 409 ADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 409 adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|..+||.+.|.+
T Consensus 78 -~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 78 -STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp -CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred -CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 89999999999 9999999998865
No 79
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=98.23 E-value=3.2e-06 Score=87.51 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=57.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCC-ceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGH-DFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~-~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
.+.++.+ +++|.|.|.+... .+.||++|| .|+|++. +|.+. ..|...|++.|.+|+.+.|.++
T Consensus 242 ~~~v~~~-~~RlRliNa~~~~-----~~~~~i~~~~~~~via~-DG~~~---------~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 242 YLEVEPR-KYRFRVINASNTR-----TYNLSLDNGGDFIQIGS-DGGLL---------PRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp EEECCSS-EEEEEEEECCSSC-----CEEEEETTCCCEEEEEE-TTEEE---------EEEEEESEEEECTTCEEEEEEE
T ss_pred eEEecCC-EEEEEEEccCCcc-----eEEEEECCCCeEEEEcc-CCCcc---------cCceEeCeEEECCeeeEEEEEE
Confidence 4677764 8999999988652 789999999 9999998 44331 1345679999999999999999
Q ss_pred cCC-ceeeee
Q 012467 409 ADN-PGAWAF 417 (463)
Q Consensus 409 adn-pG~w~~ 417 (463)
++. +|.|+.
T Consensus 306 ~~~~~g~~~~ 315 (513)
T 2wsd_A 306 FTAYEGESII 315 (513)
T ss_dssp CGGGTTCEEE
T ss_pred CCCCCCcEEE
Confidence 876 787654
No 80
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.04 E-value=5.6e-06 Score=65.58 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=57.6
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+| .|.+.. .|.++++...+- .| .+.. .. ...++.+.+.+|+...+.|
T Consensus 18 ~i~v~~G~tV~~--~n~~~~------~H~v~~~~~~~p-----~~-~~~~-~~------~~~~~~~~~~~G~~~~~tf-- 74 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNAGF------PHNIVFDEDSIP-----SG-VDAS-KI------SMSEEDLLNAKGETFEVAL-- 74 (99)
T ss_dssp EEEECTTCEEEE--EECSSC------CBCCEECTTSSC-----TT-CCHH-HH------CCCTTCCBCSTTCEEEEEC--
T ss_pred EEEECCCCEEEE--EECCCC------ceEEEEeCCCCc-----cc-cccc-cc------ccccCccccCCCCEEEEEE--
Confidence 489999999987 577655 899999875431 01 0000 00 0124556788999888766
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.|.|||+ .|..+||.+.+.+
T Consensus 75 ~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 75 SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CCCceEEEEcC--CCcccCCEEEEEE
Confidence 59999999999 7999999988865
No 81
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=98.00 E-value=1.5e-05 Score=68.46 Aligned_cols=82 Identities=20% Similarity=0.306 Sum_probs=58.4
Q ss_pred EEEccCCCEEEEEEEeCC-CCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccce-------EEeCCCc
Q 012467 330 VYMLGLNTTVDVILQNAN-AIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNT-------AVIFPYG 401 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~-~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDT-------v~v~~~g 401 (463)
.++++.|+.|.+++.|.+ .+ .|-|-++.. +. .+.. .|.-.+. ..|.||+
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~------~H~~~i~~~-------~~-~~~~---------~~~~~~~~~~~~~~~~i~PG~ 118 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGF------GHSFDITKK-------GP-PYAV---------MPVIDPIVAGTGFSPVPKDGK 118 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTC------CCCCEEESC-------CS-CCCS---------SCCCCSEEEEBCCCCCCBTTB
T ss_pred EEEEeCCCEEEEEEEcCCCCe------eeEEEEeec-------Cc-chhc---------cccccccccccccccccCCCC
Confidence 489999999999999974 33 566555521 10 0100 0001111 2567888
Q ss_pred --EEEEEEEcCCceeeeecccchHhHHccceeeeec
Q 012467 402 --WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 402 --~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
...+.|++ .||.+.||||+.-|...||-+.+.+
T Consensus 119 sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 119 FGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp EEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred ceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 99999999 9999999999999999999988764
No 82
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.00 E-value=1.7e-05 Score=80.97 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=62.7
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccce---eeEeeEEecCCceEEEEEecCCCC--CCceEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQP---FEVDDMDIYSGESYSVLLTTNQDP--SYNYWIS 191 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P---~~~~~l~i~~GeR~dvlV~~~~~~--~g~y~ir 191 (463)
.++++.|+++||+|+|.+....+.|+|++|.|+|++.||..+.| ...|++.|. ||+..|+++++... +|.|-+.
T Consensus 393 ~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~H 471 (488)
T 3od3_A 393 MFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAH 471 (488)
T ss_dssp SEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEE
T ss_pred ceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEe
Confidence 57899999999999999876779999999999999999998754 357999999 99999999998632 3556544
No 83
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.86 E-value=3.8e-05 Score=61.47 Aligned_cols=71 Identities=23% Similarity=0.278 Sum_probs=50.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|+ |.+.. .|.+|+|+.. .|.- .+ ++-.+.+|+...+.|
T Consensus 34 ~i~v~~Gd~V~~~--N~d~~------~H~v~~~~~~-------~g~~-------------~~-~~~~~~pG~~~~~tf-- 82 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NREAM------PHNVHFVAGV-------LGEA-------------AL-KGPMMKKEQAYSLTF-- 82 (105)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSSS-------------CE-ECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEcCCC-------CCcc-------------cc-cccccCCCCEEEEEe--
Confidence 4899999999885 77665 8999988532 1110 01 122367888777666
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|||++ |. ||.+.|.+
T Consensus 83 ~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 83 TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 799999999997 65 99887754
No 84
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.77 E-value=5.5e-05 Score=78.43 Aligned_cols=77 Identities=22% Similarity=0.289 Sum_probs=60.4
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 329 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 329 ~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
..+.++.|+.|+|++.|.+.. ....|.|+++++.+. ..+.||....++|+
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~---~Dv~Hgf~ip~~gv~---------------------------~~i~PG~t~t~~Ft 562 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEI---DDLTHGFTMGNYGVA---------------------------MEIGPQMTSSVTFV 562 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCS---TTCCEEEEETTTTEE---------------------------EEECTTCEEEEEEE
T ss_pred CEEEEECCCEEEEEEEeCCCC---CCceeeEEecCCCcc---------------------------eeeCCCCeEEEEEE
Confidence 468899999999999996431 011688888875422 35778999999999
Q ss_pred cCCceeeeeccc---chHhHHccceeeeeccc
Q 012467 409 ADNPGAWAFHCH---IEPHFHIGMGVVLALGV 437 (463)
Q Consensus 409 adnpG~w~~HCH---i~~H~~~GM~~~~~~~~ 437 (463)
++.||.|.|||| ...|. ||.+.+.+.+
T Consensus 563 a~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 563 AANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp CCSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 999999999999 45775 9999887654
No 85
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=97.56 E-value=0.0007 Score=71.47 Aligned_cols=81 Identities=11% Similarity=-0.069 Sum_probs=50.3
Q ss_pred EEccCCCEEEEEEEeCCCCCCC--CCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 331 YMLGLNTTVDVILQNANAIRPN--LSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~--~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
+.++ +.+++|+|+|.+....- .-+.|-.++.++.|+||+. +|.+-. +.+....|...+++.|.+|+++.|-++
T Consensus 267 ~~v~-~~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~-DG~~l~---~Pv~v~~p~~~~~l~i~pGeRydVlV~ 341 (612)
T 3gyr_A 267 ADVD-DGWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGS-DGGLLP---RPVPVDFDDTLPVLSAAPAERFDLLVD 341 (612)
T ss_dssp EEEE-SSEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEE-TTEEEE---EEEEECSSSSSSSEEECTTCEEEEEEE
T ss_pred Eecc-CcEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEe-CCCccc---cceeccCcccccEEEeccceEEEEEEE
Confidence 4444 55899999998754100 0013444455567999998 443321 111122345678999999999999999
Q ss_pred cCC-ceeee
Q 012467 409 ADN-PGAWA 416 (463)
Q Consensus 409 adn-pG~w~ 416 (463)
++. +|.++
T Consensus 342 ~~~~~~~~~ 350 (612)
T 3gyr_A 342 FRALGGRRL 350 (612)
T ss_dssp CTTCTTCEE
T ss_pred CCCCCceEE
Confidence 876 45443
No 86
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=97.54 E-value=0.00023 Score=74.71 Aligned_cols=75 Identities=5% Similarity=-0.021 Sum_probs=61.0
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc------------------------c---ceeeEeeEEec
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY------------------------V---QPFEVDDMDIY 169 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~------------------------v---~P~~~~~l~i~ 169 (463)
.++++.|++++|+|+|.+ ...+.|+|++|.|+|++.+|.. + ++...|++.|.
T Consensus 473 ~~~v~~G~~v~w~l~N~~-~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~ 551 (612)
T 2g23_A 473 GFTIGEGTHEQWTFLNLS-PILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVP 551 (612)
T ss_dssp CEEEETTCEEEEEEEECS-SSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEEC
T ss_pred ceEecCCCEEEEEEEeCC-CCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEEC
Confidence 688999999999999997 5579999999999999875421 1 12357999999
Q ss_pred CCceEEEEEecCCCCCCceEEEEE
Q 012467 170 SGESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 170 ~GeR~dvlV~~~~~~~g~y~ir~~ 193 (463)
|||++.|.++++. .+|.|-+.-.
T Consensus 552 Pg~~~~i~~~~~~-~pG~w~~HCH 574 (612)
T 2g23_A 552 GPQGLRVMGKFDG-AYGRFMYHCH 574 (612)
T ss_dssp SSEEEEEEEECCS-CCEEEEEEES
T ss_pred CCcEEEEEEEeCC-CCccEEEEeC
Confidence 9999999999984 3688776543
No 87
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.21 E-value=0.0013 Score=51.56 Aligned_cols=79 Identities=10% Similarity=0.171 Sum_probs=53.6
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|-+.+....+ ...++. . ....+...+.+|+...+.|
T Consensus 19 ~i~v~~GdtV~~~--n~~~~------~H~v~~~~~~~------p~g~~~---~------~~~~~~~~~~~g~~~~~tf-- 73 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNAGF------PHNIVFDEDAV------PAGVDA---D------AISYDDYLNSKGETVVRKL-- 73 (98)
T ss_dssp EEEECTTCEEEEE--ECSSC------CEEEEECTTSS------CTTCCH---H------HHCEEEEECSTTCEEEEEC--
T ss_pred EEEECCCCEEEEE--ECCCC------CEEEEEeCCCC------cccccc---c------cccccccccCCCCEEEEEc--
Confidence 4899999999986 66545 67766554110 000100 0 0113446788999887776
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|-+ |..+||.+.+.+
T Consensus 74 ~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 74 STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred CCCEEEEEEchh--hccCCCEEEEEE
Confidence 799999999986 999999988764
No 88
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.19 E-value=0.0006 Score=55.94 Aligned_cols=73 Identities=15% Similarity=0.186 Sum_probs=51.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|+|+..+ . .|-+..+.. .+. .-.+.+.+.+|....+.|
T Consensus 23 ~i~V~~GDTV~f~n~~---~------~Hnv~~~~~----------~~p------------~g~~~~~~~pg~t~s~TF-- 69 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD---K------SHNAESVRE----------VWP------------EGVAPVKGGFSKEVVFNA-- 69 (124)
T ss_dssp EEEECTTCEEEEECSS---S------SCCCEECTT----------TSC------------TTSCCCBCCTTCCEEEEC--
T ss_pred EEEECCCCEEEEEECC---C------CccEEEeCC----------cCC------------CCccccccCCCCEEEEEe--
Confidence 4899999999988543 3 677766522 111 001222345777766666
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.||.|.|||- .|..+||.+.+.++.
T Consensus 70 ~~~G~y~Y~C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 70 EKEGLYVLKCA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp CSSEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEcC--CCCcCCCEEEEEECC
Confidence 79999999996 899999999997764
No 89
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.13 E-value=0.0013 Score=52.56 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=49.7
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|+.|+|+ |.+.. .|.+++....- +.. ..++-.+.+|+...+.|
T Consensus 35 ~i~V~~G~tV~~~--N~d~~------~H~v~~~~~~~-----~~~----------------~~~s~~l~~g~~~~~tf-- 83 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGEVM------PHNVAFKKGIV-----GED----------------AFRGEMMTKDQAYAITF-- 83 (106)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTTS-----SSS----------------CEECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------cEEEEEeCCCC-----Ccc----------------cccccccCCCCEEEEEe--
Confidence 4899999999987 76655 68776654220 000 11233467888877777
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|-+ |. ||.+.+.+
T Consensus 84 ~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 84 NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 799999999987 76 99888764
No 90
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=97.12 E-value=0.00087 Score=56.33 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=50.6
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCC-----------------cccc----eeeEeeEEecCCc
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG-----------------NYVQ----PFEVDDMDIYSGE 172 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG-----------------~~v~----P~~~~~l~i~~Ge 172 (463)
.+..|+|++|++++|+|.|.+... .|.|.+...+. .++. ....++..|.|||
T Consensus 33 ~p~~i~v~~G~~V~~~~~N~~~~~-------~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 33 DKTELTVSAGQTVTIRFKNNSAVQ-------QHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNE 105 (139)
T ss_dssp SCSEEEECTTCEEEEEEECCCSSC-------CBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTC
T ss_pred cCCeEEECCCCEEEEEEEeCCCCC-------CeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCC
Confidence 345899999999999999987542 57776665331 1221 1234667799999
Q ss_pred eEEEEEecCCCCCCceEEEE
Q 012467 173 SYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 173 R~dvlV~~~~~~~g~y~ir~ 192 (463)
++++.+++++ +|.|++.=
T Consensus 106 t~~v~f~~~~--pG~y~f~C 123 (139)
T 2aan_A 106 TVEVTFTAPA--AGTYLYIC 123 (139)
T ss_dssp EEEEEEECCS--SEEEEEEC
T ss_pred EEEEEEECCC--CeEEEEEc
Confidence 9999999875 68998753
No 91
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.06 E-value=0.0011 Score=54.35 Aligned_cols=73 Identities=15% Similarity=0.199 Sum_probs=51.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|.|++.| . .|-+..+.. .+. .-.+.+.+.+|+...+.|
T Consensus 22 ~i~V~~GdtV~f~~~~---~------~H~v~~~~~----------~~P------------~g~~~f~~~pg~t~s~TF-- 68 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD---K------SHNVEAIKE----------ILP------------EGVESFKSKINESYTLTV-- 68 (123)
T ss_dssp EEEECTTEEEEEEESS---T------TCCCEECTT----------SSC------------TTCCCCBCCTTCCEEEEE--
T ss_pred EEEECCCCEEEEEECC---C------CceEEEcCC----------cCC------------CCccceecCCCCEEEEEe--
Confidence 3899999999999776 2 566665421 010 000112235777776666
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.||.|.|+|- .|...||.+.+.++.
T Consensus 69 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 69 TEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 79999999999 899999999997763
No 92
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.98 E-value=0.00094 Score=55.11 Aligned_cols=73 Identities=19% Similarity=0.210 Sum_probs=48.8
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.++++.|++|.|++.|. .|-+..+... +. .-...+.+.+|+...+.|
T Consensus 24 ~i~V~~GDtVtf~n~~~---------~H~v~~~~~~----------~P------------~g~~~f~s~pGet~s~TF-- 70 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKDK---------GHNSALMKGG----------AP------------EGAETWKGKINEEITVTL-- 70 (127)
T ss_dssp EEEECTTCEEEEECSSS---------SCCCEECTTC----------SC------------TTCCCCBCCTTCCCEEEC--
T ss_pred EEEECCCCEEEEEECCC---------CceEEEccCc----------CC------------CCccceecCCCCEEEEEe--
Confidence 48999999999986542 4655544210 00 000112234677655555
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.||.|.|||- .|...||.+.+.+++
T Consensus 71 ~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 71 SKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 89999999999 699999999997664
No 93
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.93 E-value=0.0022 Score=53.32 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=50.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|+|+ |.+.. .|-+++.... .|. ..-++-.+.+|+...+.|
T Consensus 61 ~i~V~~GdtV~~~--N~d~~------~H~v~~~~~~-------~g~--------------~~~~s~~l~pG~t~~~tF-- 109 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGEVM------PHNVAFKKGI-------VGE--------------DAFRGEMMTKDQAYAITF-- 109 (132)
T ss_dssp EEEECTTCEEEEE--ECSSS------CBCCEECTTT-------SSS--------------SCEECCCBCTTEEEEEEE--
T ss_pred EEEECCCCEEEEE--ECCCC------ceEEEEeCCC-------CCc--------------ccccccccCCCCEEEEEc--
Confidence 4899999999986 76655 7887765322 010 011233567888877777
Q ss_pred CCceeeeecccchHhHHccceeeeec
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+.||.+.|+|-+ |. ||.+.+.+
T Consensus 110 ~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 110 NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 799999999987 76 99888764
No 94
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.58 E-value=0.0084 Score=48.07 Aligned_cols=59 Identities=17% Similarity=0.317 Sum_probs=44.8
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
++.|+|++|+++||++.|.... .+.|.+.+. | -...+.||+.+++.+++++ +|.|+..-
T Consensus 37 p~~i~v~~G~~V~~~~~n~d~~-~H~~~i~~~--------~--------~~~~i~pG~~~~~~f~~~~--~G~y~~~C 95 (112)
T 1iby_A 37 PETLVVKKGDAVKVVVENKSPI-SEGFSIDAF--------G--------VQEVIKAGETKTISFTADK--AGAFTIWC 95 (112)
T ss_dssp SCEEEEETTCEEEEEEEECSSS-CEEEEEGGG--------T--------EEEEECTTCEEEEEEECCS--CEEEEEBC
T ss_pred CCEEEEeCCCEEEEEEEECCCC-eEEEEEcCC--------C--------ceeEeCCCCEEEEEEECCC--CEEEEEEC
Confidence 3579999999999999999843 344444432 1 1567999999999999875 79998753
No 95
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.54 E-value=0.0052 Score=53.01 Aligned_cols=94 Identities=13% Similarity=0.148 Sum_probs=59.3
Q ss_pred EEc-cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc---c--ccccCCCC---C-CCccceEEeCCC
Q 012467 331 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---E--DEKKFNLK---N-PPLKNTAVIFPY 400 (463)
Q Consensus 331 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~---~--~~~~~n~~---~-p~~rDTv~v~~~ 400 (463)
+.+ +.|+.|.|+|.|.+.. .. --=+|.|-+...+ .+.. + .....++. + -....+..|.+|
T Consensus 60 itV~kaG~~Vtv~~~N~g~~------p~--~~m~Hn~vi~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQ------PK--ASMGHNLVIAKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEETTCSSEEEEEEECSCS------CH--HHHCBCCEEEEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred EEEecCCCEEEEEEEECCCC------cc--ccccceEEeccCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 889 9999999999998743 20 0002334333321 0000 0 00000000 0 123456678999
Q ss_pred cEEEEEEEcC--CceeeeecccchHhHHccceeeeec
Q 012467 401 GWTALRFVAD--NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 401 g~~~irf~ad--npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
+...|.|.+. .||.+-|+|-+--|.. ||-+.|.+
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V 165 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTL 165 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEE
Confidence 9999999988 8999999999988988 89888765
No 96
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=96.35 E-value=0.002 Score=49.54 Aligned_cols=28 Identities=32% Similarity=0.539 Sum_probs=23.0
Q ss_pred cccccceeEEEeccchhhhhcceeeEEEEe
Q 012467 4 VWQVQAGTYFYHGHLGMQRSAGLYGSLIVD 33 (463)
Q Consensus 4 ~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~ 33 (463)
+...++|+|||||| .+...||.|.|+|+
T Consensus 64 ~~f~~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 64 ATFSEPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EECCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EEeCCCEEEEEEeC--CCccCCCEEEEEEC
Confidence 34478999999999 55666999999984
No 97
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.35 E-value=0.014 Score=48.18 Aligned_cols=94 Identities=16% Similarity=0.230 Sum_probs=59.6
Q ss_pred EEccCC-CEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc--cc----cccCCCC---CC-CccceEEeCC
Q 012467 331 YMLGLN-TTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK--ED----EKKFNLK---NP-PLKNTAVIFP 399 (463)
Q Consensus 331 ~~~~~g-~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~--~~----~~~~n~~---~p-~~rDTv~v~~ 399 (463)
+.++.| +.|.++|.|.+.. .. --=+|.|-+...+. ... .+ ....++. ++ ....+..|.|
T Consensus 20 i~V~~G~~~vtv~~~N~g~~------~~--~~m~H~~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 20 ISVPASCAEFTVNFEHKGHM------PK--TGMGHNWVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEETTCSEEEEEEEECSSS------CH--HHHCBCCEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred EEEcCCCeEEEEEEEECCCC------cc--cccccceEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 899999 9999999998753 10 00023343433221 000 00 0000000 00 2335667899
Q ss_pred CcEEEEEEEcC---CceeeeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~ad---npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|.++ .||.+-|.|-+--|.. ||-+.+.+
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V 127 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKL 127 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEE
Confidence 99999999997 8999999999988988 89888765
No 98
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.30 E-value=0.0086 Score=49.01 Aligned_cols=36 Identities=31% Similarity=0.574 Sum_probs=28.8
Q ss_pred CCCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 398 FPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 398 ~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
.+|+...+.| +.||.|.|+|- .|...||.+.+.+.+
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYVLTV--TQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEEEEe--CCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 4677655555 78999999997 599999999997654
No 99
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.23 E-value=0.0031 Score=51.98 Aligned_cols=33 Identities=21% Similarity=0.451 Sum_probs=27.0
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVAD 36 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~ 36 (463)
|++....+|+|||||- .+...||.|.|+|.++.
T Consensus 66 ~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 66 ITVTLSKPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEECCSCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEEeCCCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 3455578999999998 46678999999999864
No 100
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.20 E-value=0.0028 Score=51.92 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=26.4
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVA 35 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 35 (463)
|++....+|+|||+|- .+...||.|.|+|.++
T Consensus 64 ~s~TF~~pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 64 YTLTVTEPGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp EEEEECSCEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred EEEEeCCCeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 3445578999999998 6777899999999874
No 101
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.06 E-value=0.0095 Score=48.74 Aligned_cols=37 Identities=27% Similarity=0.628 Sum_probs=29.6
Q ss_pred eCCCcEEEEEEEcCCceeeeecccchHhHHccceeeeeccc
Q 012467 397 IFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 397 v~~~g~~~irf~adnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.+|+...+.| +.||.|.|+|. .|...||.+.+.+.+
T Consensus 58 ~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 58 TTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred cCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 35777655555 78999999998 599999999997654
No 102
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=95.98 E-value=0.0044 Score=50.74 Aligned_cols=33 Identities=12% Similarity=0.048 Sum_probs=26.8
Q ss_pred cccccccceeEEEeccchhhhhcceeeEEEEeCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVAD 36 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~~ 36 (463)
|++....+|+|||||- .+...||.|.|+|.++.
T Consensus 65 ~s~TF~~~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 65 VVFNAEKEGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp EEEECCSSEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred EEEEeCCCeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 3455578999999995 67778999999998753
No 103
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=95.91 E-value=0.012 Score=48.42 Aligned_cols=77 Identities=18% Similarity=0.257 Sum_probs=46.1
Q ss_pred CceEEEe-cCCCeEEEEEEecCcce----EEEEEEeCce-eEEEEe-------CCccccee----eEeeEEecCCceEEE
Q 012467 114 APQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVEA-------DGNYVQPF----EVDDMDIYSGESYSV 176 (463)
Q Consensus 114 ~~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via~-------DG~~v~P~----~~~~l~i~~GeR~dv 176 (463)
.+..|+| ++|++++|.|.|.+... .+.|.|.... +.-++. |-.++.+- ...+-.|.|||++++
T Consensus 16 ~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~sv 95 (128)
T 1nwp_A 16 NTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSV 95 (128)
T ss_dssp SCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEE
Confidence 3458999 99999999999998542 2444443221 000001 11233211 122336999999999
Q ss_pred EEecC--CCCCCceEEE
Q 012467 177 LLTTN--QDPSYNYWIS 191 (463)
Q Consensus 177 lV~~~--~~~~g~y~ir 191 (463)
.++++ + ++++|+..
T Consensus 96 tf~~~~l~-~G~~Y~f~ 111 (128)
T 1nwp_A 96 TFDVSKLA-AGEKYGFF 111 (128)
T ss_dssp EEEGGGSC-TTSCEEEE
T ss_pred EEeccccC-CCceEEEE
Confidence 99986 4 34559864
No 104
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.82 E-value=0.015 Score=47.92 Aligned_cols=77 Identities=21% Similarity=0.221 Sum_probs=46.3
Q ss_pred CceEEEe-cCCCeEEEEEEecCcce----EEEEEEeCce-eEEEE-------eCCcccce---e-eEeeEEecCCceEEE
Q 012467 114 APQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVE-------ADGNYVQP---F-EVDDMDIYSGESYSV 176 (463)
Q Consensus 114 ~~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via-------~DG~~v~P---~-~~~~l~i~~GeR~dv 176 (463)
.+..|+| ++|++++|.|.|.+... .+.|.|.+.. +.-++ .|-.++.+ . ...+-.|.|||++++
T Consensus 16 ~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~sv 95 (129)
T 2ccw_A 16 NVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSV 95 (129)
T ss_dssp SCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEE
Confidence 3458999 99999999999998542 3334443221 00000 01122221 1 123346899999999
Q ss_pred EEecC--CCCCCceEEE
Q 012467 177 LLTTN--QDPSYNYWIS 191 (463)
Q Consensus 177 lV~~~--~~~~g~y~ir 191 (463)
.++++ + ++++|+..
T Consensus 96 tf~~~~l~-~G~~Y~f~ 111 (129)
T 2ccw_A 96 TFDVSKIA-AGENYAYF 111 (129)
T ss_dssp EEEGGGSC-TTCCEEEE
T ss_pred EEeccccC-CCceEEEE
Confidence 99987 4 45669874
No 105
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.79 E-value=0.023 Score=58.03 Aligned_cols=79 Identities=22% Similarity=0.269 Sum_probs=57.0
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEE
Q 012467 329 GVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFV 408 (463)
Q Consensus 329 ~~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ 408 (463)
..+.++.|+.|+|++.|.+... ...|.|.+.+.... +.+.||....+.|+
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~ve---DViHSF~IPslGIK---------------------------~DaiPGrtnsvtFt 607 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIE---DVSHGFVVVNHGVS---------------------------MEISPQQTSSITFV 607 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCST---TCCEEEEETTTTEE---------------------------EEECTTCEEEEEEE
T ss_pred CEEEEecCceeEEEEecCCcCC---CceeeeEecCCCce---------------------------eeeCCCCeEEEEEE
Confidence 3578999999999999974210 01677666553321 25668999999999
Q ss_pred cCCceeeeecccchHhHH-ccceeeeeccc
Q 012467 409 ADNPGAWAFHCHIEPHFH-IGMGVVLALGV 437 (463)
Q Consensus 409 adnpG~w~~HCHi~~H~~-~GM~~~~~~~~ 437 (463)
++.||.+.++|...-|.. .+|.+.+.+.+
T Consensus 608 adkPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 608 ADKPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp CCSCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred cCCCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999999754432 57888776643
No 106
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=95.70 E-value=0.041 Score=42.98 Aligned_cols=58 Identities=14% Similarity=0.277 Sum_probs=43.3
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|++.|.+.. .+.|.+++... ...+.||+..++.+++++ +|.|.+.
T Consensus 27 P~~i~v~~G~tV~~~~~n~d~~-~H~~~~~~~~~----------------~~~~~pg~~~~~~~t~~~--~G~Y~y~ 84 (100)
T 4hci_A 27 PNVITIPINESTTLLLKNKGKS-EHTFTIKKLGI----------------DVVVESGKEKNITVKPKS--AGTYELI 84 (100)
T ss_dssp SSEEEECTTSCEEEEEEECSSS-CEEEEEGGGTE----------------EEEECTTCEEEEEECCCS--CEEEEEE
T ss_pred CCEEEECCCCEEEEEEEcCCCc-eEEEEEecCCc----------------ceeecCCcceeEEEeccc--CceEEEE
Confidence 3479999999999999998743 24555544322 245789999999999886 6899764
No 107
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.70 E-value=0.018 Score=47.34 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=45.5
Q ss_pred CceEEEe-cCCCeEEEEEEecCcce----EEEEEEeCce-eEEEE-------eCCcccc---ee-eEeeEEecCCceEEE
Q 012467 114 APQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVE-------ADGNYVQ---PF-EVDDMDIYSGESYSV 176 (463)
Q Consensus 114 ~~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via-------~DG~~v~---P~-~~~~l~i~~GeR~dv 176 (463)
.+..|+| ++|++++|.|.|.+... .+.|.|.... +.-++ .|-.++. +. ...+-.|.|||++++
T Consensus 15 ~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~v 94 (128)
T 2iaa_C 15 NTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSV 94 (128)
T ss_dssp SCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEE
T ss_pred ecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEE
Confidence 3458999 99999999999998542 2333333210 00000 1112222 11 123346899999999
Q ss_pred EEecCCCCCC-ceEEE
Q 012467 177 LLTTNQDPSY-NYWIS 191 (463)
Q Consensus 177 lV~~~~~~~g-~y~ir 191 (463)
.++++.-.+| +|+..
T Consensus 95 tf~~~~l~~G~~Y~f~ 110 (128)
T 2iaa_C 95 TFDVSKLKEGEDYAFF 110 (128)
T ss_dssp EEESSCCCTTCCEEEE
T ss_pred EEeccccCCCceEEEE
Confidence 9998721245 68764
No 108
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=95.63 E-value=0.012 Score=46.45 Aligned_cols=73 Identities=16% Similarity=0.307 Sum_probs=46.1
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
.++.|+|++|++++| +|.+. ..+.+++.+..+.. .+|..-.....+.+.|.|||++++-++++. .+|.||+.-
T Consensus 17 ~p~~i~v~~Gd~V~~--~N~~~-~~H~v~~~~~~~~~--~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~-~~G~y~y~C 89 (105)
T 3cvb_A 17 EPANVTVHPGDTVKW--VNNKL-PPHNILFDDKQVPG--ASKELADKLSHSQLMFSPGESYEITFSSDF-PAGTYTYYC 89 (105)
T ss_dssp ESSEEEECTTEEEEE--EECSS-CCEEEEECTTSSGG--GCHHHHHHHCEEEEECSTTCEEEEEECTTS-CSEEEEEEC
T ss_pred eCCEEEEcCCCEEEE--EECCC-CCCeEEEeCCCCCc--ccccccccccccccccCCCCeEEEEEecCC-CCeeEEEEe
Confidence 345899999998765 68763 34566666543221 011111111246688999999999887743 479999853
No 109
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.54 E-value=0.044 Score=45.47 Aligned_cols=69 Identities=17% Similarity=0.314 Sum_probs=50.8
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|+|++.|.+. .|. |++-+.+ --+.+.||....+.|+++
T Consensus 62 l~Vp~G~~V~~~vts~DV-------~Hs-------f~ip~~~--------------------~k~d~~PG~~~~~~~~~~ 107 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPDV-------IHG-------FHVEGTN--------------------INVEVLPGEVSTVRYTFK 107 (135)
T ss_dssp EEEETTSEEEEEEEBSSS-------CEE-------EEETTSS--------------------CEEEECBTBCEEEEEECC
T ss_pred EEEcCCCEEEEEEEeCCc-------cce-------EEecCCC--------------------ceeEeCCCCcEEEEEEcC
Confidence 889999999999998753 344 4432211 114566788888999999
Q ss_pred Cceeeeecccc---hHhHHccceeeeec
Q 012467 411 NPGAWAFHCHI---EPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi---~~H~~~GM~~~~~~ 435 (463)
.||.+.++|.. ..| .+|-+.+.+
T Consensus 108 ~~G~y~~~C~e~CG~~H--~~M~g~v~V 133 (135)
T 2cua_A 108 RPGEYRIICNQYCGLGH--QNMFGTIVV 133 (135)
T ss_dssp SCEEEEEECCSCCSTTS--TTCEEEEEE
T ss_pred CCEEEEEECcccCCCCc--CCCEEEEEE
Confidence 99999999976 667 478776643
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.43 E-value=0.064 Score=44.12 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=57.8
Q ss_pred EEc-cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCcc--c----cccCCCC---CC-CccceEEeCC
Q 012467 331 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKE--D----EKKFNLK---NP-PLKNTAVIFP 399 (463)
Q Consensus 331 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~--~----~~~~n~~---~p-~~rDTv~v~~ 399 (463)
+.+ +.|+.|.++|.|.+.. . ---=+|.|-+...+ .+..- + ...-++. ++ ....+..|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~p 89 (129)
T 2ccw_A 20 IVVDKSCKQFTMHLKHVGKM------A--KVAMGHNLVLTKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGG 89 (129)
T ss_dssp EEECTTCSEEEEEEEECSCC------C--HHHHCBCCEEEEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCc------c--cccCcceEEEcCcc--chhhhHHHhhhhcccccccccccccceeeeeEECC
Confidence 888 8899999999998753 2 00002334333321 00000 0 0000000 00 1234557899
Q ss_pred CcEEEEEEEcC--Ccee-eeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~ad--npG~-w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|.++ .||. +-|.|-+--|.. ||-+.+.+
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V 127 (129)
T 2ccw_A 90 GESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKL 127 (129)
T ss_dssp TCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEE
Confidence 99999999998 7765 999999988988 89888765
No 111
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=95.18 E-value=0.013 Score=47.95 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=25.3
Q ss_pred ccccccceeEEEeccchhhhhcceeeEEEEeCC
Q 012467 3 DVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVA 35 (463)
Q Consensus 3 ~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 35 (463)
++....+|+|||+|- .+...||.|.|+|.++
T Consensus 65 ~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 65 VLTVTQPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp EEECCSCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred EEEeCCCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 445578999999996 4667799999999874
No 112
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.14 E-value=0.025 Score=48.74 Aligned_cols=77 Identities=22% Similarity=0.264 Sum_probs=45.8
Q ss_pred ceEEEe-cCCCeEEEEEEecCcce----EEEEEEeCce-eEEEEe------CCcccce---e-eEeeEEecCCceEEEEE
Q 012467 115 PQILHV-QPNKTYRLRIASTTALA----SLNLAVKNHK-MVVVEA------DGNYVQP---F-EVDDMDIYSGESYSVLL 178 (463)
Q Consensus 115 ~~~~~v-~~g~~~RlRliNa~~~~----~~~~~i~~h~-~~via~------DG~~v~P---~-~~~~l~i~~GeR~dvlV 178 (463)
+..|+| ++|++++|.|.|.+... .+.|.|.... +.-++. +-.++.+ . ......|.|||+++|.+
T Consensus 57 P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf 136 (167)
T 3ay2_A 57 TKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTL 136 (167)
T ss_dssp CSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred cceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEE
Confidence 347999 99999999999998542 2333332211 000000 1122221 1 22345689999999999
Q ss_pred ecCCCCCCceEEE
Q 012467 179 TTNQDPSYNYWIS 191 (463)
Q Consensus 179 ~~~~~~~g~y~ir 191 (463)
+++...+|.|+..
T Consensus 137 ~~~~lkpG~Y~f~ 149 (167)
T 3ay2_A 137 DPAKLADGDYKFA 149 (167)
T ss_dssp CGGGGTTSCEEEE
T ss_pred ecCCCCCcEEEEE
Confidence 9872126889874
No 113
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=95.13 E-value=0.023 Score=46.23 Aligned_cols=77 Identities=21% Similarity=0.285 Sum_probs=46.7
Q ss_pred ceEEEecC-CCeEEEEEEecCcce----EEEEEEeCc-eeEEEEe-------CCcccce----eeEeeEEecCCceEEEE
Q 012467 115 PQILHVQP-NKTYRLRIASTTALA----SLNLAVKNH-KMVVVEA-------DGNYVQP----FEVDDMDIYSGESYSVL 177 (463)
Q Consensus 115 ~~~~~v~~-g~~~RlRliNa~~~~----~~~~~i~~h-~~~via~-------DG~~v~P----~~~~~l~i~~GeR~dvl 177 (463)
+..|+|++ |+++||.|.|.|... .+.|-|... .+.-++. |-.|+.+ ....+-.|+|||++++.
T Consensus 17 p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vt 96 (125)
T 3fsa_A 17 TNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVT 96 (125)
T ss_dssp CSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEE
T ss_pred cCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEE
Confidence 34899976 999999999999642 233333211 1111111 3344532 22345569999999999
Q ss_pred EecCC-CCCCceEEE
Q 012467 178 LTTNQ-DPSYNYWIS 191 (463)
Q Consensus 178 V~~~~-~~~g~y~ir 191 (463)
++++. .++|+|...
T Consensus 97 f~~~~l~~~G~y~f~ 111 (125)
T 3fsa_A 97 FDVSKLKEGEQYMFF 111 (125)
T ss_dssp EEGGGC---CCEEEE
T ss_pred EeCcCcCCCccEEEE
Confidence 99872 136888764
No 114
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=95.11 E-value=0.047 Score=45.51 Aligned_cols=69 Identities=22% Similarity=0.212 Sum_probs=46.8
Q ss_pred ceEEEecCCCeEEEEEEe--cCcceEEEEEEeCceeEEEEeC----------------Ccccc-----eeeEeeEEecCC
Q 012467 115 PQILHVQPNKTYRLRIAS--TTALASLNLAVKNHKMVVVEAD----------------GNYVQ-----PFEVDDMDIYSG 171 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliN--a~~~~~~~~~i~~h~~~via~D----------------G~~v~-----P~~~~~l~i~~G 171 (463)
+..|+|++|++++|++.| .+. . .|.|.+...+ ..++. ....++..|.+|
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~-~-------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG 103 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLG-V-------QHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAG 103 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSC-C-------CBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTT
T ss_pred CCeEEECCCCEEEEEEECCCCCC-C-------ceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCC
Confidence 457999999999999999 332 2 3444444211 12221 123456789999
Q ss_pred ceEEEEEecCCCCCCceEEEEE
Q 012467 172 ESYSVLLTTNQDPSYNYWISAG 193 (463)
Q Consensus 172 eR~dvlV~~~~~~~g~y~ir~~ 193 (463)
++.++.+++++ +|.|++.=.
T Consensus 104 ~~~~~~~~~~~--~G~y~f~C~ 123 (140)
T 1qhq_A 104 ESGSVTFRTPA--PGTYLYICT 123 (140)
T ss_dssp EEEEEEEECCS--SEEEEEECC
T ss_pred ceeEEEEEeCC--CeeEEEEeC
Confidence 99999999975 689987543
No 115
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=94.98 E-value=0.024 Score=46.70 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=46.1
Q ss_pred CceEEEecCC-CeEEEEEEecCcce----EEEEEEeCce-eEEEEeC-------Ccccc---ee-eEeeEEecCCceEEE
Q 012467 114 APQILHVQPN-KTYRLRIASTTALA----SLNLAVKNHK-MVVVEAD-------GNYVQ---PF-EVDDMDIYSGESYSV 176 (463)
Q Consensus 114 ~~~~~~v~~g-~~~RlRliNa~~~~----~~~~~i~~h~-~~via~D-------G~~v~---P~-~~~~l~i~~GeR~dv 176 (463)
.+..|+|++| ++++|.|.|.+... .+.|.|.... +.-++.| -.++. +. ...+..|.|||++++
T Consensus 16 ~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~sv 95 (129)
T 1cuo_A 16 STRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSV 95 (129)
T ss_dssp SCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEE
T ss_pred ccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEE
Confidence 3458999999 99999999998532 3333333221 0000000 01221 11 123346899999999
Q ss_pred EEecCC-CCCCceEEE
Q 012467 177 LLTTNQ-DPSYNYWIS 191 (463)
Q Consensus 177 lV~~~~-~~~g~y~ir 191 (463)
.++++. ..+|+|+..
T Consensus 96 tf~~~~~~~~G~Y~f~ 111 (129)
T 1cuo_A 96 KFKVSALSKDEAYTYF 111 (129)
T ss_dssp EEEGGGCCTTSCEEEE
T ss_pred EEeccccCCCceEEEE
Confidence 999861 036899874
No 116
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=94.96 E-value=0.016 Score=47.44 Aligned_cols=31 Identities=16% Similarity=0.129 Sum_probs=25.3
Q ss_pred ccccccceeEEEeccchhhhhcceeeEEEEeCC
Q 012467 3 DVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVA 35 (463)
Q Consensus 3 ~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 35 (463)
++....+|+|||+|- .+...||.|.|+|.++
T Consensus 65 ~~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 65 VVKFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp EEECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred EEEeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 445568999999996 4666799999999864
No 117
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.93 E-value=0.067 Score=43.91 Aligned_cols=43 Identities=26% Similarity=0.357 Sum_probs=36.8
Q ss_pred cceEEeCCCcEEEEEEEcC--Cce-eeeecccchHhHHccceeeeec
Q 012467 392 KNTAVIFPYGWTALRFVAD--NPG-AWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 392 rDTv~v~~~g~~~irf~ad--npG-~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
..|..|.||+...|.|.+. .|| .+-|.|-+--|.. ||-+.+.+
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 126 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIEL 126 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEE
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 3456789999999999998 899 4999999999988 99888765
No 118
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.75 E-value=0.096 Score=42.98 Aligned_cols=94 Identities=16% Similarity=0.227 Sum_probs=57.7
Q ss_pred EEc-cCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCC------CCccccccCCCC---CC-CccceEEeCC
Q 012467 331 YML-GLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGK------FTKEDEKKFNLK---NP-PLKNTAVIFP 399 (463)
Q Consensus 331 ~~~-~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~------~~~~~~~~~n~~---~p-~~rDTv~v~~ 399 (463)
+.+ +.|+.|.+++.|.+.. . ---=+|.|-+...+.-. .... ..-++. ++ ....|-.|.|
T Consensus 20 i~V~k~G~~vtv~~~N~g~~------p--~~~m~H~~vi~~~~~~~~~~~~~m~~~--~~~~~~~~~~~~~~~~t~~l~p 89 (128)
T 1nwp_A 20 IAIDKSCKTFTVELTHSGSL------P--KNVMGHNLVISKEADMQPIATDGLSAG--IDKQYLKDGDARVIAHTKVIGA 89 (128)
T ss_dssp EEECTTCSEEEEEEEECSSC------C--HHHHCBCCEEEEGGGHHHHHHHHTTTC--GGGTTSCTTCTTEEEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCCC------c--ccCCCceEEEccccchhhHHHHHhhcc--ccccccccccchhheeeeeeCC
Confidence 889 8999999999998753 2 00002234333221000 0000 000000 00 1234556899
Q ss_pred CcEEEEEEEcC--Ccee-eeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVAD--NPGA-WAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~ad--npG~-w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|.+. .||. +-|.|-+--|.. ||-+.+.+
T Consensus 90 Get~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 90 GEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp TCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 99999999998 7876 999999988988 89887754
No 119
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=94.66 E-value=0.052 Score=44.19 Aligned_cols=71 Identities=18% Similarity=0.178 Sum_probs=45.2
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEc
Q 012467 330 VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVA 409 (463)
Q Consensus 330 ~~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~a 409 (463)
.+.++.|++|.|+ |.+. .|-+++.. +.+... ...+.+.+|+...+.|
T Consensus 22 ~i~V~~GdtV~f~--n~d~-------~H~v~~~~----------~~~p~~------------~~~~~~~~g~t~~~tF-- 68 (122)
T 2ux6_A 22 SLKVAPGDTVTFI--PTDK-------GHNVETIK----------GMIPDG------------AEAFKSKINENYKVTF-- 68 (122)
T ss_dssp EEEECTTEEEEEE--ESSS-------SCCCEECT----------TCSCTT------------CCCCBCCTTCCEEEEE--
T ss_pred EEEECCCCEEEEE--ECCC-------CcEEEEcc----------cccCCC------------cceeecCCCCEEEEEe--
Confidence 4899999999886 4431 46666553 111100 0011234677766666
Q ss_pred CCceeeeecccchHhHHccceeeeeccc
Q 012467 410 DNPGAWAFHCHIEPHFHIGMGVVLALGV 437 (463)
Q Consensus 410 dnpG~w~~HCHi~~H~~~GM~~~~~~~~ 437 (463)
+.||.|.|+|-+ |.. |.+.+.+.+
T Consensus 69 ~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 69 TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 799999999987 766 888886653
No 120
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.55 E-value=0.12 Score=41.99 Aligned_cols=91 Identities=15% Similarity=0.235 Sum_probs=57.5
Q ss_pred EEccC-CCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCc---c---ccccCCC----CCCCccceEEeCC
Q 012467 331 YMLGL-NTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK---E---DEKKFNL----KNPPLKNTAVIFP 399 (463)
Q Consensus 331 ~~~~~-g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~---~---~~~~~n~----~~p~~rDTv~v~~ 399 (463)
+.++. |+.|+++|.|.+.+ |--.=||.|-+...+ .... + ....-++ .....-.|..|.+
T Consensus 20 i~V~~~Ge~V~~~l~N~G~~--------p~~~M~Hn~Vl~~~~--~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~p 89 (125)
T 3fsa_A 20 ITVDKSCKQFTVNLSHPGNL--------PKNVMGHNWVLSTAA--DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGS 89 (125)
T ss_dssp EEECTTCSEEEEEEECCSSC--------CHHHHCBCCEEEEHH--HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCT
T ss_pred EEEecCCCEEEEEEEECCcc--------cccccCceEEEcccc--hHHHHHHHHHhcChhhccCCCCCccceeccceeCC
Confidence 88876 99999999998854 111114566444221 1100 0 0000111 1124456778999
Q ss_pred CcEEEEEEEcC---CceeeeecccchHhHHccceeeeec
Q 012467 400 YGWTALRFVAD---NPGAWAFHCHIEPHFHIGMGVVLAL 435 (463)
Q Consensus 400 ~g~~~irf~ad---npG~w~~HCHi~~H~~~GM~~~~~~ 435 (463)
|+...|.|.+. .+|.+-|-|- -|. ||-+.+.+
T Consensus 90 Ges~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 90 GEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp TCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred CcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 99999999988 8999999999 888 99887754
No 121
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=93.96 E-value=0.18 Score=43.30 Aligned_cols=71 Identities=15% Similarity=0.320 Sum_probs=52.6
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|+|.+.|.+. .|.|.+=+... -+.+.||....+.|.++
T Consensus 95 l~VP~G~~Vr~~vTS~DV-------iHsf~IP~lgi---------------------------k~da~PG~~n~~~~~~~ 140 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSPDV-------IHGFHVEGTNI---------------------------NVEVLPGEVSTVRYTFK 140 (168)
T ss_dssp EEEETTSEEEEEEECSSS-------CEEEEETTSSC---------------------------EEEECTTBCEEEEEECC
T ss_pred EEEeCCCeEEEEEecCCc-------eEEEEECCCCe---------------------------EEEecCCceeEEEEEeC
Confidence 889999999999999764 46544432211 13455788888999999
Q ss_pred Cceeeeecccc-hHhHHccceeeeec
Q 012467 411 NPGAWAFHCHI-EPHFHIGMGVVLAL 435 (463)
Q Consensus 411 npG~w~~HCHi-~~H~~~GM~~~~~~ 435 (463)
.||.+.+.|.. .-+...+|...+.+
T Consensus 141 kpG~y~g~Cse~CG~~Hs~M~g~V~V 166 (168)
T 3s8f_B 141 RPGEYRIICNQYCGLGHQNMFGTIVV 166 (168)
T ss_dssp SCEEEEEECCSCCSTTGGGCEEEEEE
T ss_pred CCEEEEEECCcCCCCCcCCCEEEEEE
Confidence 99999999984 55556788777654
No 122
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=93.50 E-value=0.068 Score=45.44 Aligned_cols=74 Identities=8% Similarity=0.007 Sum_probs=42.4
Q ss_pred eEEEecCCCeEEEEEEecCcceEEEEEEeCc--eeEEEEeCCcccceeeEeeEEecCCc--eEEEEEecCCCCCCceEEE
Q 012467 116 QILHVQPNKTYRLRIASTTALASLNLAVKNH--KMVVVEADGNYVQPFEVDDMDIYSGE--SYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 116 ~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h--~~~via~DG~~v~P~~~~~l~i~~Ge--R~dvlV~~~~~~~g~y~ir 191 (463)
+.|+|++|++++|++.|.+....+.|.|... .+.....+ ..+.+..-....|.||| ..++.+++ + +|.||..
T Consensus 61 p~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~i~PG~sgt~t~tft~-~--pGtY~y~ 136 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVI-DPIVAGTGFSPVPKDGKFGYTDFTWHP-T--AGTYYYV 136 (154)
T ss_dssp CEEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCC-CSEEEEBCCCCCCBTTBEEEEEEEECC-C--SEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccc-cccccccccccccCCCCceEEEEEEEE-C--CceEEEE
Confidence 4899999999999999975333444444321 11000000 00111000112679999 77777777 5 6999986
Q ss_pred EE
Q 012467 192 AG 193 (463)
Q Consensus 192 ~~ 193 (463)
-.
T Consensus 137 C~ 138 (154)
T 2cal_A 137 CQ 138 (154)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 123
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=93.32 E-value=0.022 Score=44.91 Aligned_cols=71 Identities=14% Similarity=0.237 Sum_probs=40.6
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|+ |.+.. .+.|.+.+..+.. .+|..-.....+.+.+.|||++++.++++. .+|.|++.
T Consensus 19 P~~i~v~~Gd~V~~~--n~~~~-~H~~~~~~~~~~~--~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~-~~G~y~y~ 89 (106)
T 2gim_A 19 PAKLTIKPGDTVEFL--NNKVP-PHNVVFDAALNPA--KSADLAKSLSHKQLLMSPGQSTSTTFPADA-PAGEYTFY 89 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS-CCCBEECSSSSTT--CCHHHHHHHCBCSCCCSTTCEEEEECCTTC-CSEEEEEE
T ss_pred CCEEEECCCCEEEEE--ECCCC-CceEEEeCCCCcc--cccccchhccccceeeCCCCEEEEEEecCC-CCceEEEE
Confidence 458999999988775 77632 2333333221100 011110111135678999999999766533 47999876
No 124
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=92.32 E-value=0.36 Score=37.07 Aligned_cols=66 Identities=20% Similarity=0.306 Sum_probs=40.3
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++| .|.+. ..+.|.+.+..+ -+|..-.....+.+.+.||+++.+ ++++ +|.|++.
T Consensus 17 P~~i~v~~G~~V~~--~n~~~-~~H~~~~~~~~~----p~~~~~~~~~~~~~~~~pG~~~~~--tf~~--~G~y~y~ 82 (98)
T 2plt_A 17 PKTLTIKSGETVNF--VNNAG-FPHNIVFDEDAI----PSGVNADAISRDDYLNAPGETYSV--KLTA--AGEYGYY 82 (98)
T ss_dssp SSEEEECTTCEEEE--EECSS-CCEEEEECGGGS----CTTCCHHHHCEEEEECSTTCEEEE--ECCS--CEEEEEE
T ss_pred CCEEEECCCCEEEE--EECCC-CceEEEEeCCCC----CCccccccccccceecCCCCEEEE--EeCC--CeEEEEE
Confidence 45799999998876 68763 345555544211 011111111245688999999988 4443 6899875
No 125
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=91.85 E-value=0.29 Score=37.63 Aligned_cols=66 Identities=11% Similarity=0.189 Sum_probs=39.6
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|..|+|++|++++|+ |.+. ..+.+.+.+.... |..-.....+.+.+.||+.+.+ +++ .+|.|++.=
T Consensus 18 P~~i~v~~G~~V~~~--n~~~-~~H~~~~~~~~~p-----g~~~~~~~~~~~~~~pG~~~~~--tf~--~~G~y~~~C 83 (98)
T 1pcs_A 18 PSTVTIKAGEEVKWV--NNKL-SPHNIVFDADGVP-----ADTAAKLSHKGLLFAAGESFTS--TFT--EPGTYTYYC 83 (98)
T ss_dssp SSEEEECTTCEEEEE--ECSS-CCEEEEECCSSSC-----HHHHHHHCEEEEECSTTCEEEE--ECC--SCEEEEEEC
T ss_pred CCEEEECCCCEEEEE--ECCC-CCcEEEEeCCCCC-----ccccccccccccccCCCCEEEE--EcC--CCeEEEEEc
Confidence 457999999998876 7653 2344444432110 0000011245788999999887 444 368998753
No 126
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=91.43 E-value=0.17 Score=39.34 Aligned_cols=64 Identities=13% Similarity=0.161 Sum_probs=40.2
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcc-------cce-eeEeeEEecCCceEEEEEecCCCCC
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNY-------VQP-FEVDDMDIYSGESYSVLLTTNQDPS 185 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~-------v~P-~~~~~l~i~~GeR~dvlV~~~~~~~ 185 (463)
.|..|+|++|++++|+ |.+.. .|.+.+..-+|.. ..| ...+.+.+.|||++.+ +++ .+
T Consensus 15 ~P~~i~v~~G~tV~~~--n~~~~--------~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~--tf~--~~ 80 (102)
T 1kdj_A 15 YPDSITVSAGEAVEFT--LVGET--------GHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKA--KVS--TP 80 (102)
T ss_dssp ESSEEEECTTCCEEEE--ECSSS--------CBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEE--CCC--SC
T ss_pred eCCEEEECCCCEEEEE--ECCCC--------CeEEEEeCcccccccccchhhcccccccceecCCCCEEEE--EeC--CC
Confidence 3457999999998875 77632 3565554333421 001 1124577899999888 454 46
Q ss_pred CceEEE
Q 012467 186 YNYWIS 191 (463)
Q Consensus 186 g~y~ir 191 (463)
|.|++.
T Consensus 81 G~y~y~ 86 (102)
T 1kdj_A 81 GTYTFY 86 (102)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 899875
No 127
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=90.80 E-value=0.53 Score=36.02 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=39.1
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCccc--ceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYV--QPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v--~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|+ |.+.. .|.+.+.+.+. +. .....+.+.+.||+++++- ++ .+|.|++.
T Consensus 18 P~~i~v~~G~~V~~~--n~~~~--------~H~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~t--f~--~~G~y~y~ 81 (97)
T 1b3i_A 18 PKALSISAGDTVEFV--MNKVG--------PHNVIFDKVPA-GESAPALSNTKLAIAPGSFYSVT--LG--TPGTYSFY 81 (97)
T ss_dssp SSEEEECTTCEEEEE--ECSSC--------CCCBEEEECCT-TSCHHHHCBCCCCCSCSCCEEEE--CC--SCSEEEEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------CeEEEEeCCCC-ccccccccccceecCCCCEEEEE--eC--CCeEEEEE
Confidence 457999999987765 76531 36665544321 11 0111356788999999884 44 46899875
No 128
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=90.03 E-value=0.9 Score=34.87 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=38.5
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.|..|+|++|++++|+ |.+. ..+.+.+....+ -+|........+.+.+.+|+++.+- ++ .+|.|++.
T Consensus 16 ~P~~i~v~~GdtV~~~--n~~~-~~H~v~~~~~~~----p~g~~~~~~~~~~~~~~~g~~~~~t--f~--~~G~y~y~ 82 (98)
T 1iuz_A 16 VPSKISVAAGEAIEFV--NNAG-FPHNIVFDEDAV----PAGVDADAISYDDYLNSKGETVVRK--LS--TPGVYGVY 82 (98)
T ss_dssp ESSEEEECTTCEEEEE--ECSS-CCEEEEECTTSS----CTTCCHHHHCEEEEECSTTCEEEEE--CC--SCEEEEEE
T ss_pred eCCEEEECCCCEEEEE--ECCC-CCEEEEEeCCCC----ccccccccccccccccCCCCEEEEE--cC--CCEEEEEE
Confidence 3458999999988775 7653 233333332100 0111111112345789999998884 44 36899874
No 129
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=89.60 E-value=0.96 Score=46.85 Aligned_cols=62 Identities=13% Similarity=0.170 Sum_probs=47.6
Q ss_pred CceEEEecCCCeEEEEEEecCc--ceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTA--LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~--~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.++.|+|++|++++|++.|... ...+.|.+.++.+. ..+.||+..++.+++++ +|.||..
T Consensus 511 ~pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------~~i~PG~t~t~~Fta~~--pGtY~yh 572 (595)
T 1fwx_A 511 SIESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------MEIGPQMTSSVTFVAAN--PGVYWYY 572 (595)
T ss_dssp SCSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS--CEEEEEE
T ss_pred cCCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------eeeCCCCeEEEEEECCC--CEEEEEE
Confidence 4568999999999999999643 23466666654321 57899999999999975 7999986
Q ss_pred EE
Q 012467 192 AG 193 (463)
Q Consensus 192 ~~ 193 (463)
-.
T Consensus 573 C~ 574 (595)
T 1fwx_A 573 CQ 574 (595)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 130
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=89.39 E-value=5.2 Score=32.01 Aligned_cols=76 Identities=13% Similarity=0.264 Sum_probs=51.9
Q ss_pred CCCeE--EEEEEecCcceEEEEEEe-Cce--eEEEEeCCcccc--------eeeEeeEEecCCceEEEEEecCC-CCCCc
Q 012467 122 PNKTY--RLRIASTTALASLNLAVK-NHK--MVVVEADGNYVQ--------PFEVDDMDIYSGESYSVLLTTNQ-DPSYN 187 (463)
Q Consensus 122 ~g~~~--RlRliNa~~~~~~~~~i~-~h~--~~via~DG~~v~--------P~~~~~l~i~~GeR~dvlV~~~~-~~~g~ 187 (463)
.|+.+ .|.+.|.+. ....|.+. |.+ |.|...+|..|- +.......|.|||...+-++.++ ..+|.
T Consensus 16 ~g~~v~~~ltv~N~s~-~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSE-RAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSS-SCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCC-CcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44454 677888884 44555553 444 444444576662 34567899999999999999985 35799
Q ss_pred eEEEEEecCCC
Q 012467 188 YWISAGVRGRK 198 (463)
Q Consensus 188 y~ir~~~~~~~ 198 (463)
|.+.+......
T Consensus 95 Ytl~a~l~~~~ 105 (120)
T 3isy_A 95 YEVKVTFKGRA 105 (120)
T ss_dssp EEEEEEECCEE
T ss_pred EEEEEEEEeee
Confidence 99998765543
No 131
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=87.90 E-value=0.25 Score=40.06 Aligned_cols=29 Identities=21% Similarity=0.114 Sum_probs=22.1
Q ss_pred ccccccceeEEEeccchhhhhcceeeEEEEeCC
Q 012467 3 DVWQVQAGTYFYHGHLGMQRSAGLYGSLIVDVA 35 (463)
Q Consensus 3 ~~~~~~~GT~WYHsH~~~q~~~Gl~G~lIV~~~ 35 (463)
++...++|+|||+|-. +.. |.|.|+|.++
T Consensus 65 ~~tF~~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 65 KVTFTAPGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp EEEECSCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred EEEeCCCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 3444689999999975 222 9999999874
No 132
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=87.10 E-value=0.97 Score=35.26 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=37.0
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA 192 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~ 192 (463)
|..|+|++|++++| +|... ..+.+.+.+ ..||.. ..+.-.|.+|+++.+-+ + .+|.|++.-
T Consensus 32 P~~i~v~~Gd~V~~--~N~d~-~~H~v~~~~------~~~g~~----~~~~~~~~pG~~~~~tf--~--~~G~y~y~C 92 (105)
T 2ov0_A 32 TPELHVKVGDTVTW--INREA-MPHNVHFVA------GVLGEA----ALKGPMMKKEQAYSLTF--T--EAGTYDYHC 92 (105)
T ss_dssp SSEEEECTTCEEEE--EECSS-SCBCCEECT------TTSSSS----CEECCCBCTTEEEEEEE--C--SCEEEEEEC
T ss_pred CCEEEECCCCEEEE--EECCC-CCEEEEEcC------CCCCcc----cccccccCCCCEEEEEe--C--CCEEEEEEe
Confidence 45899999999877 48764 223333322 113321 12233478999988755 4 368998863
No 133
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=81.69 E-value=1.3 Score=33.86 Aligned_cols=67 Identities=13% Similarity=0.264 Sum_probs=37.6
Q ss_pred CceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccc--eeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQ--PFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~--P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.|..|+|++|++++| .|.+. ..+.+.+.+..+ -||.... ....+.+.+.|||.+.+- +++ +|.|++.
T Consensus 15 ~P~~i~v~~G~tV~~--~n~~~-~~H~v~~~~~~~----p~~~~~~~~~~~~~~~~~~~G~~~~~t--f~~--~G~y~~~ 83 (99)
T 1plc_A 15 VPSEFSISPGEKIVF--KNNAG-FPHNIVFDEDSI----PSGVDASKISMSEEDLLNAKGETFEVA--LSN--KGEYSFY 83 (99)
T ss_dssp ESSEEEECTTCEEEE--EECSS-CCBCCEECTTSS----CTTCCHHHHCCCTTCCBCSTTCEEEEE--CCS--CEEEEEE
T ss_pred eCCEEEECCCCEEEE--EECCC-CceEEEEeCCCC----cccccccccccccCccccCCCCEEEEE--ECC--CceEEEE
Confidence 345899999998877 67763 223333332111 0221100 011233678999998884 443 6899875
No 134
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=81.30 E-value=0.96 Score=34.66 Aligned_cols=63 Identities=21% Similarity=0.294 Sum_probs=37.2
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEe---CCcccc--eeeEeeEEecCCceEEEEEecCCCCCCceE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEA---DGNYVQ--PFEVDDMDIYSGESYSVLLTTNQDPSYNYW 189 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~---DG~~v~--P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ 189 (463)
|..|+|++|++++| .|.+.. .|.+.+... ||.... ....+.+.+.+||.+.+-+ ++ +|.|+
T Consensus 16 P~~i~v~~G~tV~~--~n~~~~--------~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f--~~--~G~y~ 81 (99)
T 1byp_A 16 PSDLSIASGEKITF--KNNAGF--------PHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTL--TE--KGTYK 81 (99)
T ss_dssp SSEEEECTTEEEEE--EECSSC--------CBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEE--CS--CEEEE
T ss_pred CCEEEECCCCEEEE--EECCCC--------cceEEEeCCCCccccccccccccccceeeCCCCEEEEEe--CC--CcEEE
Confidence 45799999998776 677632 244433221 222110 0112346789999988855 43 68887
Q ss_pred EE
Q 012467 190 IS 191 (463)
Q Consensus 190 ir 191 (463)
+.
T Consensus 82 ~~ 83 (99)
T 1byp_A 82 FY 83 (99)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 135
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=80.69 E-value=5 Score=32.89 Aligned_cols=55 Identities=18% Similarity=0.285 Sum_probs=40.6
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.+.|+.|+++||++-|.. ..+.|.|.+..+ .+.+.||+.-.+.+++++ +|.|...
T Consensus 61 ~l~Vp~G~~V~~~vts~D--V~Hsf~ip~~~~----------------k~d~~PG~~~~~~~~~~~--~G~y~~~ 115 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD--VIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR--PGEYRII 115 (135)
T ss_dssp SEEEETTSEEEEEEEBSS--SCEEEEETTSSC----------------EEEECBTBCEEEEEECCS--CEEEEEE
T ss_pred EEEEcCCCEEEEEEEeCC--ccceEEecCCCc----------------eeEeCCCCcEEEEEEcCC--CEEEEEE
Confidence 689999999999988865 345555554432 245678988888888886 6899875
No 136
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=80.55 E-value=5.4 Score=40.92 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=46.4
Q ss_pred CceEEEecCCCeEEEEEEecCc--ceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 114 APQILHVQPNKTYRLRIASTTA--LASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~--~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.+..|.|+.|+++||.+-|... .-.+.|.|.+..+. +.+.||+...+.+++++ +|.|+..
T Consensus 556 sP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------~DaiPGrtnsvtFtadk--PGvY~y~ 617 (638)
T 3sbq_A 556 GVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------MEISPQQTSSITFVADK--PGLHWYY 617 (638)
T ss_dssp SCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------EEECTTCEEEEEEECCS--CEEEEEE
T ss_pred cCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------eeeCCCCeEEEEEEcCC--CEEEEEE
Confidence 3457999999999999999742 45677777665432 36889999999999986 6999875
No 137
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=77.06 E-value=3.4 Score=32.13 Aligned_cols=60 Identities=12% Similarity=0.135 Sum_probs=35.7
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|+ |.+.. .|.+... ++. .-....+.-.|.+|+.+.+-+ + .+|.|++.
T Consensus 33 P~~i~V~~G~tV~~~--N~d~~--------~H~v~~~--~~~-~~~~~~~s~~l~~g~~~~~tf--~--~~G~y~~~ 92 (106)
T 1id2_A 33 TPEVTIKAGETVYWV--NGEVM--------PHNVAFK--KGI-VGEDAFRGEMMTKDQAYAITF--N--EAGSYDYF 92 (106)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--------CBCCEEC--TTT-SSSSCEECCCBCTTEEEEEEE--C--SCEEEEEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------cEEEEEe--CCC-CCcccccccccCCCCEEEEEe--C--CCEEEEEE
Confidence 458999999998776 77642 2333221 121 000112334678999988755 4 36898775
No 138
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=77.04 E-value=6.5 Score=31.94 Aligned_cols=60 Identities=10% Similarity=0.111 Sum_probs=36.4
Q ss_pred ceEEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 115 PQILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 115 ~~~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
|..|+|++|++++|+ |.... .|.+... ++.. -....+...+.+|+++++-+ + .+|.|++.
T Consensus 59 P~~i~V~~GdtV~~~--N~d~~--------~H~v~~~--~~~~-g~~~~~s~~l~pG~t~~~tF--~--~~G~y~y~ 118 (132)
T 3c75_A 59 TPEVTIKAGETVYWV--NGEVM--------PHNVAFK--KGIV-GEDAFRGEMMTKDQAYAITF--N--EAGSYDYF 118 (132)
T ss_dssp SSEEEECTTCEEEEE--ECSSS--------CBCCEEC--TTTS-SSSCEECCCBCTTEEEEEEE--C--SCEEEEEE
T ss_pred CCEEEECCCCEEEEE--ECCCC--------ceEEEEe--CCCC-CcccccccccCCCCEEEEEc--C--CCEEEEEE
Confidence 458999999998775 77632 2443332 1110 00123344678999998765 4 36899875
No 139
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=75.50 E-value=8.5 Score=32.79 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=42.0
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWIS 191 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir 191 (463)
.+.++.|+.+||++-|. .-.+.|.|.+..+ .+.+.||+.-.+.+++++ +|.|+..
T Consensus 94 ~l~VP~G~~Vr~~vTS~--DViHsf~IP~lgi----------------k~da~PG~~n~~~~~~~k--pG~y~g~ 148 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSP--DVIHGFHVEGTNI----------------NVEVLPGEVSTVRYTFKR--PGEYRII 148 (168)
T ss_dssp SEEEETTSEEEEEEECS--SSCEEEEETTSSC----------------EEEECTTBCEEEEEECCS--CEEEEEE
T ss_pred EEEEeCCCeEEEEEecC--CceEEEEECCCCe----------------EEEecCCceeEEEEEeCC--CEEEEEE
Confidence 68899999999999986 4556667765433 235678988888888886 6899875
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=75.00 E-value=5.2 Score=35.25 Aligned_cols=69 Identities=20% Similarity=0.228 Sum_probs=48.4
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|++.|.+.+.+ |. |+|-+.| .. +.+-||-...+.|.++
T Consensus 43 l~lP~g~~V~~~lTS~DVi-------HS-------F~IP~lg-----------------vK---~daiPGr~n~l~~~~~ 88 (205)
T 1cyx_A 43 IAFPANTPVYFKVTSNSVM-------HS-------FFIPRLG-----------------SQ---IYAMAGMQTRLHLIAN 88 (205)
T ss_dssp EEEETTSCEEEEEEESSSC-------EE-------EEEGGGT-----------------EE---EEECTTCCEEEEECCS
T ss_pred EEEeCCCEEEEEEecCCce-------ee-------EEecccC-----------------cE---EEecCCceEEEEEEeC
Confidence 8899999999999998754 44 5553322 11 2344688888999999
Q ss_pred CceeeeecccchHhHH-ccceeee
Q 012467 411 NPGAWAFHCHIEPHFH-IGMGVVL 433 (463)
Q Consensus 411 npG~w~~HCHi~~H~~-~GM~~~~ 433 (463)
.||.+...|--.-... ..|-..+
T Consensus 89 ~pG~y~g~CsE~CG~~Hs~M~~~v 112 (205)
T 1cyx_A 89 EPGTYDGICAEICGPGHSGMKFKA 112 (205)
T ss_dssp SSEEEEEEECSCCSTTSTTCCEEE
T ss_pred CCeEEEEEcccccccchhhceEEE
Confidence 9999999998544333 3354444
No 141
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=71.38 E-value=11 Score=29.81 Aligned_cols=46 Identities=22% Similarity=0.317 Sum_probs=32.2
Q ss_pred eEEEEEEecCcc-eEEEEEEeCc-eeEEEEeCCcccceeeEeeEEecCCceEEEEEec
Q 012467 125 TYRLRIASTTAL-ASLNLAVKNH-KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTT 180 (463)
Q Consensus 125 ~~RlRliNa~~~-~~~~~~i~~h-~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~ 180 (463)
.|+|||+|.+.. ..|.|++.|. .+.++. +. .+.+.+||..++-|..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~~---~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------KQ---TIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEES-------CC---EEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEeC-------CC---cEEECCCCEEEEEEEE
Confidence 589999999976 5688888874 233332 11 3899999977665554
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=66.34 E-value=13 Score=34.81 Aligned_cols=69 Identities=19% Similarity=0.187 Sum_probs=48.5
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|++.+.+.+.. |. |+|-+.| .. +.+-||....+.|.++
T Consensus 191 lvlP~g~~V~~~ltS~DVi-------Hs-------f~iP~lg-----------------~k---~daiPG~~n~~~~~~~ 236 (298)
T 3hb3_B 191 VVVPVGKKVLVQVTATDVI-------HA-------WTIPAFA-----------------VK---QDAVPGRIAQLWFSVD 236 (298)
T ss_dssp EEEESSSEEEEEEEESSSC-------EE-------EEEGGGT-----------------EE---EEECTTCCEEEEEECS
T ss_pred EEEEcCCEEEEEEEeCCcc-------ce-------eeEcccC-----------------ce---EEecCCceEEEEEEeC
Confidence 8899999999999998754 55 4443221 11 2344688888999999
Q ss_pred CceeeeecccchH-hHHccceeee
Q 012467 411 NPGAWAFHCHIEP-HFHIGMGVVL 433 (463)
Q Consensus 411 npG~w~~HCHi~~-H~~~GM~~~~ 433 (463)
.||.+...|.-.- .-...|-..+
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v 260 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVV 260 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEE
T ss_pred CCEEEEEEcccccCcCccCCeeEE
Confidence 9999999999433 2334455555
No 143
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=64.02 E-value=14 Score=33.81 Aligned_cols=69 Identities=25% Similarity=0.302 Sum_probs=47.8
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|++.+.+.+.. |. |+|-+.| ...| +-||....+.|.++
T Consensus 173 l~lP~g~~v~~~~tS~DVi-------Hs-------f~ip~l~-----------------~k~d---a~PG~~n~~~~~~~ 218 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVI-------HS-------WTVPAFG-----------------VKQD---AVPGRLAQLWFRAE 218 (262)
T ss_dssp EEEETTSEEEEEEEESSSC-------EE-------EEEGGGT-----------------EEEE---ECBTCCEEEEEECC
T ss_pred EEEecCCEEEEEEEECccc-------ce-------eeecccC-----------------ceEE---ecCCceeEEEEecC
Confidence 8899999999999988753 54 4443322 1223 34677788999999
Q ss_pred CceeeeecccchHhH-Hccceeee
Q 012467 411 NPGAWAFHCHIEPHF-HIGMGVVL 433 (463)
Q Consensus 411 npG~w~~HCHi~~H~-~~GM~~~~ 433 (463)
.||.+...|--.--. ...|-..+
T Consensus 219 ~~G~y~g~Cse~CG~~H~~M~~~v 242 (262)
T 2gsm_B 219 REGIFFGQCSELCGISHAYMPITV 242 (262)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEE
T ss_pred CcEEEEEEChHhcccCcccCeEEE
Confidence 999999999854333 23354444
No 144
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=60.41 E-value=64 Score=25.83 Aligned_cols=71 Identities=15% Similarity=0.143 Sum_probs=46.6
Q ss_pred EecCCCeE--EEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecC
Q 012467 119 HVQPNKTY--RLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 196 (463)
Q Consensus 119 ~v~~g~~~--RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~ 196 (463)
.+.+|+.+ +..+-|.|....-.+.+ .+ -.||..+.-. .+.|++|+.-.|-+.......|+|.|++....
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~l-yvng~~v~t~---~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RV-YINGTLYKNW---TVSLGPKEEKVLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EE-EETTEEEEEE---EEEECTTCEEEEEEEECCSSCEEEEEEEEEST
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EE-EECCEEEeeE---EeccCCCCeEEEEEEEEcCCCcEEEEEEEEcC
Confidence 45677776 66688988765433332 22 2366655322 34699999988888876545789999987654
Q ss_pred CC
Q 012467 197 RK 198 (463)
Q Consensus 197 ~~ 198 (463)
..
T Consensus 99 ~n 100 (127)
T 3idu_A 99 EN 100 (127)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 145
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=51.33 E-value=25 Score=31.45 Aligned_cols=69 Identities=17% Similarity=0.276 Sum_probs=47.5
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|++.+.+.+.. |. |+|-+.| ...| +-||-...+.|.++
T Consensus 142 lvlP~~~~Vr~~vtS~DVi-------Hs-------f~vP~lg-----------------~K~D---aiPGr~n~~~~~~~ 187 (227)
T 1v54_B 142 VVLPMEMTIRMLVSSEDVL-------HS-------WAVPSLG-----------------LKTD---AIPGRLNQTTLMSS 187 (227)
T ss_dssp EEEETTSCEEEEEEESSSC-------EE-------EEEGGGT-----------------EEEE---ECTTCCEEEEECCS
T ss_pred EEEecCCEEEEEEEeCccc-------ce-------eeecccC-----------------cEEE---ecCCceEEEEEecC
Confidence 8899999999999998753 55 5443322 1223 33677788899999
Q ss_pred CceeeeecccchHhHHc-cceeee
Q 012467 411 NPGAWAFHCHIEPHFHI-GMGVVL 433 (463)
Q Consensus 411 npG~w~~HCHi~~H~~~-GM~~~~ 433 (463)
.||.+...|.-.--..- -|-..+
T Consensus 188 ~~G~y~g~Cse~CG~~Hs~M~~~v 211 (227)
T 1v54_B 188 RPGLYYGQCSEICGSNHSFMPIVL 211 (227)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEE
T ss_pred CcEEEEEEehhhcccccccCeEEE
Confidence 99999999985443333 344444
No 146
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=43.91 E-value=24 Score=33.22 Aligned_cols=69 Identities=17% Similarity=0.163 Sum_probs=47.3
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCCCCeeecCCceEEEeecCCCCCccccccCCCCCCCccceEEeCCCcEEEEEEEcC
Q 012467 331 YMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEKKFNLKNPPLKNTAVIFPYGWTALRFVAD 410 (463)
Q Consensus 331 ~~~~~g~~v~~vl~N~~~~~~~~~~~HP~HlHG~~f~vl~~g~g~~~~~~~~~~n~~~p~~rDTv~v~~~g~~~irf~ad 410 (463)
+.++.|+.|++.+...+.. |. |+|-+.| ...| +-||-...+.|.++
T Consensus 153 l~lP~g~~V~~~lTS~DVi-------Hs-------f~IP~lg-----------------~k~D---aiPGr~n~~~~~~~ 198 (315)
T 1fft_B 153 IAFPANTPVYFKVTSNSVM-------NS-------FFIPRLG-----------------SQIY---AMAGMQTRLHLIAN 198 (315)
T ss_dssp CCCCSSSEEEEEECBSSSC-------EE-------EEEGGGT-----------------EEEE---ECBTSCEEEEEECC
T ss_pred EEEeCCCEEEEEEEeCCcc-------ce-------eeecccC-----------------cEEe---ecCCcceeeEEecC
Confidence 6789999999999987753 54 5553321 1223 34677888999999
Q ss_pred CceeeeecccchHhHH-ccceeee
Q 012467 411 NPGAWAFHCHIEPHFH-IGMGVVL 433 (463)
Q Consensus 411 npG~w~~HCHi~~H~~-~GM~~~~ 433 (463)
.||.+...|--.--.. ..|-..+
T Consensus 199 ~~G~y~g~CsE~CG~~Hs~M~~~v 222 (315)
T 1fft_B 199 EPGTYDGISASYSGPGFSGMKFKA 222 (315)
T ss_dssp SCBCCEEBCCSCCSTTTTTCCEEC
T ss_pred CCeEEEEeccccchhhHHhccceE
Confidence 9999999997543332 3454544
No 147
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=42.10 E-value=11 Score=30.42 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=17.3
Q ss_pred EEEecCCCeEEEEEEecCcce
Q 012467 117 ILHVQPNKTYRLRIASTTALA 137 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~ 137 (463)
.|+|++||++||.+.|-+...
T Consensus 72 ~InV~~GETVrF~v~nkt~~W 92 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVAW 92 (131)
T ss_dssp EEEEETTCEEEEEETTEEEEE
T ss_pred EEEecCCCEEEEEeCCcEEEE
Confidence 599999999999999866433
No 148
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=32.11 E-value=1.8e+02 Score=27.62 Aligned_cols=47 Identities=26% Similarity=0.258 Sum_probs=33.0
Q ss_pred eeEEEEeCCcccc----------eeeEeeEEecCCceEEEEEecCCC----CCCceEEEEEe
Q 012467 147 KMVVVEADGNYVQ----------PFEVDDMDIYSGESYSVLLTTNQD----PSYNYWISAGV 194 (463)
Q Consensus 147 ~~~via~DG~~v~----------P~~~~~l~i~~GeR~dvlV~~~~~----~~g~y~ir~~~ 194 (463)
.|.| ..||..|+ |..-+-+.|+|||..++.+++... .+|.|.|++..
T Consensus 67 ~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs~gG~y~v~~~g 127 (343)
T 2x3c_A 67 LFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMSAQGQYSIRYQL 127 (343)
T ss_dssp CEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCCSCEEEEEEEC-
T ss_pred eEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccCCCceEEEEEee
Confidence 3444 57776652 323356899999999999998642 46889998864
No 149
>1x9l_A CUI-DR1885; copper binding protein, solution ST holo-form, structural proteomics in europe, spine, structur genomics; NMR {Deinococcus radiodurans} SCOP: b.2.10.1 PDB: 2jqa_A
Probab=27.89 E-value=2.2e+02 Score=23.29 Aligned_cols=55 Identities=5% Similarity=0.058 Sum_probs=33.7
Q ss_pred EEEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCCcccceeeEeeEEecCCceEEE
Q 012467 117 ILHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 176 (463)
Q Consensus 117 ~~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG~~v~P~~~~~l~i~~GeR~dv 176 (463)
.++++....--.||+.+++...-...|+.+.+ +++-.+-..++.|.|.+|+...+
T Consensus 48 y~ti~N~g~~~d~Lv~vsS~~a~~velH~~~~-----~~Gvm~M~~v~~i~IPag~~v~L 102 (149)
T 1x9l_A 48 YMTLTNKSDQPIKLVGAATPLATSPMLMTTTH-----SGGMAGMKMVPWLTIPARGTLTL 102 (149)
T ss_dssp EEECCCBSCCEEEECCCBCSSEEEEEEEEEST-----TSSCEECSCCSCEEEESCCCCEE
T ss_pred EEEEEeCCCCCcEEEEEECCCCCcEEEEEEEc-----cCCeEEEEEcCcEEECCCCeEec
Confidence 45665444456777888876655666665543 33333334456788888888655
No 150
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=26.46 E-value=47 Score=26.17 Aligned_cols=40 Identities=15% Similarity=0.233 Sum_probs=0.0
Q ss_pred cccccccceeEEEeccchhhhhcceeeEE-EEeCCCCCCCC
Q 012467 2 LDVWQVQAGTYFYHGHLGMQRSAGLYGSL-IVDVADGEKEP 41 (463)
Q Consensus 2 ~~~~~~~~GT~WYHsH~~~q~~~Gl~G~l-IV~~~~~~~~p 41 (463)
..+.+..+|++||=|=.+.+=..||...| .|..+.....|
T Consensus 72 ~~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~~~~~~~ 112 (116)
T 1x9u_A 72 VKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGA 112 (116)
T ss_dssp EEEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-------
T ss_pred eEEEECCCCCEEEECCCCCccccCCEEEEEEECCCCCCCCC
No 151
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=25.30 E-value=96 Score=27.33 Aligned_cols=22 Identities=23% Similarity=0.492 Sum_probs=19.0
Q ss_pred CceEEEecCCCeEEEEEEecCc
Q 012467 114 APQILHVQPNKTYRLRIASTTA 135 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~ 135 (463)
.||.+++++|+...+||+..+.
T Consensus 64 tPPl~Rl~p~~~q~lRI~~~~~ 85 (218)
T 4ay0_A 64 TPPLFRLDAKQQNSLRIAQAGG 85 (218)
T ss_dssp ESSEEEECTTCEEEEEEEECSC
T ss_pred CCCeEEeCCCCceEEEEEecCC
Confidence 3568999999999999998874
No 152
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=25.05 E-value=55 Score=29.75 Aligned_cols=22 Identities=41% Similarity=0.530 Sum_probs=19.0
Q ss_pred CceEEEecCCCeEEEEEEecCc
Q 012467 114 APQILHVQPNKTYRLRIASTTA 135 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~ 135 (463)
.||.+++++|+...+||+..+.
T Consensus 83 tPPl~rl~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 83 TPAVTRVEPNGGAVLRIAYLKA 104 (257)
T ss_dssp ESSEEEECTTEEEEEEEEECCC
T ss_pred cCCEEEECCCCceEEEEEECCC
Confidence 3578999999999999998774
No 153
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=24.84 E-value=60 Score=24.44 Aligned_cols=69 Identities=12% Similarity=0.175 Sum_probs=36.9
Q ss_pred ecCCCeEEEEEEecCcceEEEEEEeCc--eeEEEEeCCcccceeeEeeEEecCCceEEEEEecCCC-CCCceEEEEEe
Q 012467 120 VQPNKTYRLRIASTTALASLNLAVKNH--KMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQD-PSYNYWISAGV 194 (463)
Q Consensus 120 v~~g~~~RlRliNa~~~~~~~~~i~~h--~~~via~DG~~v~P~~~~~l~i~~GeR~dvlV~~~~~-~~g~y~ir~~~ 194 (463)
-+||+++++|++--..... -..+- .++|..-+|..+.-.. ........++.-+.++.. ..|.|.|++..
T Consensus 13 YrPGetV~~~~~~~~~~~~---p~~~~~~~v~l~dp~g~~v~~~~---~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 13 YKPGQTVKFRVVSMDENFH---PLNELIPLVYIQDPKGNRIAQWQ---SFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp ECTTCEEEEEEEEECGGGC---BCCCEEEEEEEECTTSCEEEEEE---EEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred cCCCCEEEEEEEEECCCCc---CCCCCceEEEEECCCCCEEEEEE---eecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 4799999999764322110 01111 3455556666543211 111223456666666553 35899999875
No 154
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=24.39 E-value=2.6e+02 Score=21.94 Aligned_cols=85 Identities=12% Similarity=0.059 Sum_probs=43.3
Q ss_pred EEecCCCeEEEEEEecCcceEEEEEEeCceeEEEEeCC-cccceeeEeeEEecCCceEEEEEecCCCCCCceEEEEEecC
Q 012467 118 LHVQPNKTYRLRIASTTALASLNLAVKNHKMVVVEADG-NYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRG 196 (463)
Q Consensus 118 ~~v~~g~~~RlRliNa~~~~~~~~~i~~h~~~via~DG-~~v~P~~~~~l~i~~GeR~dvlV~~~~~~~g~y~ir~~~~~ 196 (463)
++++....--.||+.+++...-...|+.+.+. ..+| +-.+-..++.|.|.+|++..+ ++|-|.|-.....
T Consensus 20 ~ti~N~g~~~~~Lv~v~S~~a~~velH~~~~~--~~~~~gvm~M~~v~~i~ipag~~v~l-------~PGG~HvML~gl~ 90 (120)
T 2k6w_A 20 LTLENPGDLPLRLVGARTPVAERVELHETFMR--EVEGKKVMGMRPVPFLEVPPKGRVEL-------KPGGYHFMLLGLK 90 (120)
T ss_dssp EEEECCSSSCEEEEECCCSSEEEEEEEEEEEE--ESSSSEEEEEEECSCEEECTTCEEEE-------CTTTEEEEEEEES
T ss_pred EEEEeCCCCCcEEEEEECCCCCcEEEEEEEec--CCccCCeeEEEEcCcEeECCCCEEec-------cCCceEEEEeCCC
Confidence 44443333456777777665555555544331 1111 333444556888999988665 2455655443333
Q ss_pred CCCCCC-CeEEEEEeC
Q 012467 197 RKPATP-PALTLLNYH 211 (463)
Q Consensus 197 ~~~~~~-~~~a~l~y~ 211 (463)
...... ..-.+|.++
T Consensus 91 ~~l~~G~~v~ltL~Fe 106 (120)
T 2k6w_A 91 RPLKAGEEVELDLLFA 106 (120)
T ss_dssp SCBCTTCEEEEEEEET
T ss_pred CCCCCCCEEEEEEEEC
Confidence 222222 233456665
No 155
>2kcq_A MOV34/MPN/PAD-1 family; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Salinibacter ruber dsm 13855}
Probab=23.27 E-value=32 Score=28.46 Aligned_cols=6 Identities=50% Similarity=0.905 Sum_probs=5.3
Q ss_pred EEEecc
Q 012467 12 YFYHGH 17 (463)
Q Consensus 12 ~WYHsH 17 (463)
=|||||
T Consensus 80 G~yHSH 85 (153)
T 2kcq_A 80 GVYHSH 85 (153)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 499999
No 156
>2kks_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; NMR {Desulfitobacterium hafniense}
Probab=22.51 E-value=34 Score=28.05 Aligned_cols=6 Identities=33% Similarity=0.578 Sum_probs=5.4
Q ss_pred EEEecc
Q 012467 12 YFYHGH 17 (463)
Q Consensus 12 ~WYHsH 17 (463)
=|||||
T Consensus 78 G~~HSH 83 (146)
T 2kks_A 78 GNFHSH 83 (146)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 499999
No 157
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=21.21 E-value=89 Score=28.02 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=19.0
Q ss_pred CceEEEecCCCeEEEEEEecCc
Q 012467 114 APQILHVQPNKTYRLRIASTTA 135 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~ 135 (463)
.||.+++++|+...|||+..+.
T Consensus 72 tPPlfRlep~~~q~lRIi~~~~ 93 (239)
T 4djm_A 72 TPPLFRLDGQQSSRLRIVRTGG 93 (239)
T ss_dssp ESSEEEECTTEEEEEEEEECSC
T ss_pred cCCeEEECCCCceEEEEEECCC
Confidence 3578999999999999998774
No 158
>3p6b_A Cellulose 1,4-beta-cellobiosidase; beta-sandwich, carbohydrate binding, sugar binding protein; 2.00A {Clostridium thermocellum}
Probab=20.91 E-value=4e+02 Score=22.99 Aligned_cols=58 Identities=10% Similarity=0.129 Sum_probs=32.9
Q ss_pred EEEecCCCeEEEEEEe-cCcceEEEEEEeCceeEEEEeCCcccceeeEe---eEEecC--CceEEEEEecCC
Q 012467 117 ILHVQPNKTYRLRIAS-TTALASLNLAVKNHKMVVVEADGNYVQPFEVD---DMDIYS--GESYSVLLTTNQ 182 (463)
Q Consensus 117 ~~~v~~g~~~RlRliN-a~~~~~~~~~i~~h~~~via~DG~~v~P~~~~---~l~i~~--GeR~dvlV~~~~ 182 (463)
-|.+++|++|+|.|-= |+..+.+.+.| ..+|.+-..+.-+ .+.|.+ -|+|++.+++..
T Consensus 97 gi~L~~G~tY~lSFdAkA~~~r~i~v~i--------~~~~~~y~~Y~~~~~~~i~ltt~e~q~yt~~FT~~~ 160 (205)
T 3p6b_A 97 GITLEQGHTYTVRFTIWSDKSCRVYAKI--------GQMGEPYTEYWNNNWNPFNLTPGQKLTVEQNFTMNY 160 (205)
T ss_dssp EEEECTTCEEEEEEEEEESSCEEEEEEE--------EESSTTCCEEESSTTCCEEEBTTEEEEEEEEEECCS
T ss_pred CEEecCCCEEEEEEEEEeCCCceEEEEE--------ecCCCCcceeccCccceEEecCCCCEEEEEEEEeCC
Confidence 4789999999987643 23334444333 3344432223222 566754 467777777753
No 159
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=20.80 E-value=59 Score=28.91 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=18.9
Q ss_pred CceEEEecCCCeEEEEEEecCc
Q 012467 114 APQILHVQPNKTYRLRIASTTA 135 (463)
Q Consensus 114 ~~~~~~v~~g~~~RlRliNa~~ 135 (463)
.||.+++++|+...|||+..+.
T Consensus 52 tPPlfRlep~~~q~lRIi~~~~ 73 (224)
T 3gfu_C 52 TPSFFKVKPNGQQTLRIIMASD 73 (224)
T ss_dssp ESSEEEECTTCEEEEEEEECSC
T ss_pred cCCeEEECCCCceEEEEEECCC
Confidence 3578999999999999998763
No 160
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=20.42 E-value=1.7e+02 Score=25.81 Aligned_cols=30 Identities=10% Similarity=0.174 Sum_probs=22.4
Q ss_pred EEEEEecCcceEEEEEEeCceeEEEEeCCccc
Q 012467 127 RLRIASTTALASLNLAVKNHKMVVVEADGNYV 158 (463)
Q Consensus 127 RlRliNa~~~~~~~~~i~~h~~~via~DG~~v 158 (463)
++++.|+|....+.++ +.++..+..|+.++
T Consensus 109 ~l~~~~aG~~~~~l~r--~g~~~~l~~~~~~l 138 (242)
T 3pu9_A 109 SVLVTRNSEVPMLLGR--NGEFEQISESGGRI 138 (242)
T ss_dssp EEEEEEESCCCEEEEE--TTEEEEECCCCCCB
T ss_pred EEEEEeCCCCcEEEEE--CCEEEEeCCCCccc
Confidence 7889999987776654 45677777777765
Done!