Query 012473
Match_columns 463
No_of_seqs 166 out of 1406
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:00:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012473.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012473hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 3E-103 6E-108 803.5 34.9 384 25-462 22-416 (454)
2 PLN02209 serine carboxypeptida 100.0 4.4E-94 9.6E-99 742.9 40.6 387 20-462 12-403 (437)
3 PLN03016 sinapoylglucose-malat 100.0 6.1E-94 1.3E-98 741.8 38.2 380 25-462 15-399 (433)
4 PF00450 Peptidase_S10: Serine 100.0 4.5E-89 9.9E-94 708.0 31.1 371 37-463 1-385 (415)
5 PTZ00472 serine carboxypeptida 100.0 2.2E-83 4.7E-88 670.7 35.8 350 41-461 41-421 (462)
6 PLN02213 sinapoylglucose-malat 100.0 5.1E-65 1.1E-69 510.3 27.5 280 125-462 1-285 (319)
7 KOG1283 Serine carboxypeptidas 100.0 2.2E-58 4.8E-63 438.3 13.7 363 48-463 4-383 (414)
8 COG2939 Carboxypeptidase C (ca 100.0 7.9E-58 1.7E-62 463.4 16.9 335 61-462 86-459 (498)
9 TIGR03611 RutD pyrimidine util 98.1 2.8E-05 6.1E-10 73.7 10.5 107 74-223 11-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 98.0 3.2E-05 6.9E-10 74.4 9.8 128 49-222 4-132 (288)
11 PLN02824 hydrolase, alpha/beta 98.0 5.1E-05 1.1E-09 74.9 10.8 122 51-221 12-137 (294)
12 PHA02857 monoglyceride lipase; 98.0 7.4E-05 1.6E-09 72.9 11.6 123 59-222 10-133 (276)
13 TIGR03056 bchO_mg_che_rel puta 97.9 8E-05 1.7E-09 72.0 11.1 123 51-223 10-132 (278)
14 PRK00870 haloalkane dehalogena 97.9 0.00017 3.7E-09 71.5 12.9 139 31-220 9-149 (302)
15 TIGR01249 pro_imino_pep_1 prol 97.9 0.00012 2.7E-09 72.9 11.5 126 49-222 6-131 (306)
16 PRK10673 acyl-CoA esterase; Pr 97.7 0.00015 3.3E-09 69.4 9.5 104 71-219 11-114 (255)
17 PLN02298 hydrolase, alpha/beta 97.7 0.00027 5.8E-09 71.1 11.1 139 46-222 31-170 (330)
18 PF10340 DUF2424: Protein of u 97.7 0.00012 2.5E-09 74.4 8.1 132 62-225 106-239 (374)
19 PRK06489 hypothetical protein; 97.7 0.00044 9.6E-09 70.7 12.3 141 44-220 38-188 (360)
20 PF12697 Abhydrolase_6: Alpha/ 97.6 0.00013 2.9E-09 67.0 7.2 104 79-224 1-104 (228)
21 TIGR02240 PHA_depoly_arom poly 97.6 0.00045 9.7E-09 67.6 10.5 117 59-222 11-127 (276)
22 PLN02385 hydrolase; alpha/beta 97.6 0.00078 1.7E-08 68.5 12.5 127 58-222 70-198 (349)
23 PLN02578 hydrolase 97.5 0.00095 2.1E-08 68.1 12.4 112 59-220 75-186 (354)
24 PLN02652 hydrolase; alpha/beta 97.5 0.00082 1.8E-08 69.8 11.3 127 59-222 120-246 (395)
25 PRK03592 haloalkane dehalogena 97.5 0.0012 2.6E-08 65.1 11.7 120 51-223 11-130 (295)
26 PRK11126 2-succinyl-6-hydroxy- 97.4 0.00062 1.3E-08 64.7 9.2 100 76-220 2-101 (242)
27 PRK03204 haloalkane dehalogena 97.4 0.0017 3.7E-08 64.1 11.6 122 47-220 14-135 (286)
28 PRK10749 lysophospholipase L2; 97.3 0.0018 3.9E-08 65.3 11.1 125 59-222 40-167 (330)
29 TIGR02427 protocat_pcaD 3-oxoa 97.3 0.0017 3.7E-08 60.7 10.1 90 73-196 10-99 (251)
30 PLN03084 alpha/beta hydrolase 97.3 0.0025 5.3E-08 65.9 12.0 131 44-221 101-232 (383)
31 TIGR03695 menH_SHCHC 2-succiny 97.3 0.0014 3E-08 61.1 9.1 104 76-220 1-104 (251)
32 PLN02894 hydrolase, alpha/beta 97.2 0.0029 6.2E-08 65.9 12.1 109 74-221 103-211 (402)
33 COG1506 DAP2 Dipeptidyl aminop 97.2 0.00052 1.1E-08 75.4 6.6 135 52-223 368-509 (620)
34 PLN02679 hydrolase, alpha/beta 97.2 0.004 8.7E-08 63.7 11.9 104 75-220 87-190 (360)
35 TIGR03343 biphenyl_bphD 2-hydr 97.1 0.0018 3.9E-08 63.0 8.5 75 126-220 61-135 (282)
36 PRK05077 frsA fermentation/res 97.1 0.0031 6.7E-08 65.9 10.6 79 126-222 223-301 (414)
37 PRK14875 acetoin dehydrogenase 97.0 0.0048 1E-07 62.7 10.3 103 74-220 129-231 (371)
38 PLN03087 BODYGUARD 1 domain co 96.9 0.0073 1.6E-07 64.1 11.4 132 46-219 175-307 (481)
39 TIGR03101 hydr2_PEP hydrolase, 96.9 0.0045 9.9E-08 60.7 9.2 127 59-224 9-137 (266)
40 PRK10349 carboxylesterase BioH 96.9 0.0044 9.6E-08 59.6 8.6 95 77-220 14-108 (256)
41 TIGR02821 fghA_ester_D S-formy 96.8 0.021 4.5E-07 56.1 13.2 42 173-224 135-176 (275)
42 KOG4409 Predicted hydrolase/ac 96.8 0.0046 9.9E-08 61.8 7.8 136 45-224 63-198 (365)
43 TIGR01840 esterase_phb esteras 96.8 0.0064 1.4E-07 57.2 8.6 37 159-196 79-115 (212)
44 PLN02211 methyl indole-3-aceta 96.7 0.0074 1.6E-07 59.3 9.3 106 74-220 16-121 (273)
45 TIGR01738 bioH putative pimelo 96.7 0.0043 9.4E-08 57.8 7.3 96 76-220 4-99 (245)
46 PLN02965 Probable pheophorbida 96.7 0.0054 1.2E-07 59.2 7.9 76 126-220 31-106 (255)
47 PLN02442 S-formylglutathione h 96.6 0.01 2.2E-07 58.7 9.0 57 155-224 125-181 (283)
48 KOG1455 Lysophospholipase [Lip 96.6 0.045 9.7E-07 53.9 12.9 123 58-220 36-163 (313)
49 PRK05855 short chain dehydroge 96.5 0.013 2.9E-07 63.1 10.3 100 59-193 12-111 (582)
50 PRK08775 homoserine O-acetyltr 96.4 0.016 3.5E-07 58.8 9.5 76 124-221 98-173 (343)
51 PLN02511 hydrolase 96.4 0.035 7.7E-07 57.4 12.1 118 48-196 72-193 (388)
52 PLN02980 2-oxoglutarate decarb 96.4 0.023 5.1E-07 69.1 12.0 107 73-220 1368-1479(1655)
53 PRK10566 esterase; Provisional 96.3 0.024 5.2E-07 54.2 9.6 109 63-196 14-127 (249)
54 COG2267 PldB Lysophospholipase 96.3 0.034 7.3E-07 55.5 10.7 137 47-224 9-145 (298)
55 TIGR01607 PST-A Plasmodium sub 96.2 0.051 1.1E-06 55.0 11.9 93 125-222 74-186 (332)
56 PRK10985 putative hydrolase; P 96.2 0.036 7.8E-07 55.8 10.5 114 52-196 36-151 (324)
57 COG0596 MhpC Predicted hydrola 96.1 0.045 9.8E-07 50.4 10.3 104 76-222 21-124 (282)
58 PRK07581 hypothetical protein; 96.0 0.039 8.5E-07 55.7 9.9 128 59-220 25-158 (339)
59 KOG1515 Arylacetamide deacetyl 96.0 0.057 1.2E-06 54.7 10.7 147 47-225 61-211 (336)
60 PF00561 Abhydrolase_1: alpha/ 95.9 0.014 3E-07 54.2 5.7 75 127-221 2-79 (230)
61 COG3509 LpqC Poly(3-hydroxybut 95.7 0.15 3.2E-06 50.2 11.6 146 59-242 44-202 (312)
62 TIGR03100 hydr1_PEP hydrolase, 95.5 0.11 2.4E-06 51.0 10.5 78 126-222 58-135 (274)
63 TIGR00976 /NonD putative hydro 95.5 0.036 7.7E-07 60.2 7.5 129 59-224 6-135 (550)
64 cd00707 Pancreat_lipase_like P 95.2 0.035 7.6E-07 54.7 5.9 81 125-220 66-146 (275)
65 KOG2564 Predicted acetyltransf 95.0 0.12 2.5E-06 50.5 8.5 108 73-218 71-179 (343)
66 PRK00175 metX homoserine O-ace 95.0 0.2 4.3E-06 51.6 11.0 127 59-220 32-181 (379)
67 KOG4178 Soluble epoxide hydrol 94.9 0.23 4.9E-06 49.6 10.4 140 45-227 20-159 (322)
68 PF00975 Thioesterase: Thioest 94.3 0.26 5.7E-06 46.3 9.2 76 126-220 28-103 (229)
69 PLN00021 chlorophyllase 94.2 0.63 1.4E-05 46.8 12.1 143 44-223 21-168 (313)
70 PF00326 Peptidase_S9: Prolyl 94.0 0.057 1.2E-06 50.5 4.0 90 126-226 15-104 (213)
71 TIGR03230 lipo_lipase lipoprot 93.8 0.16 3.5E-06 53.3 7.1 67 125-196 73-139 (442)
72 PF12695 Abhydrolase_5: Alpha/ 93.7 0.15 3.3E-06 43.9 5.8 95 78-221 1-95 (145)
73 KOG1838 Alpha/beta hydrolase [ 93.6 0.74 1.6E-05 47.5 11.3 109 73-221 122-236 (409)
74 PRK10162 acetyl esterase; Prov 93.6 0.31 6.6E-06 49.0 8.6 45 175-223 153-197 (318)
75 PRK10115 protease 2; Provision 93.4 0.26 5.6E-06 55.0 8.4 143 50-226 417-564 (686)
76 PF06500 DUF1100: Alpha/beta h 93.0 0.062 1.3E-06 55.5 2.6 79 126-222 219-297 (411)
77 KOG4391 Predicted alpha/beta h 92.2 0.35 7.7E-06 45.5 6.1 130 52-223 57-186 (300)
78 PLN02872 triacylglycerol lipas 91.8 0.91 2E-05 47.2 9.4 123 44-191 41-175 (395)
79 PF10230 DUF2305: Uncharacteri 91.1 1.2 2.5E-05 43.7 8.9 118 76-223 2-124 (266)
80 TIGR01392 homoserO_Ac_trn homo 90.9 2.2 4.7E-05 43.3 11.0 79 125-221 72-162 (351)
81 PRK11460 putative hydrolase; P 89.6 1.9 4.1E-05 41.2 8.8 38 158-196 86-123 (232)
82 PRK11071 esterase YqiA; Provis 89.6 1.4 3E-05 40.7 7.7 32 162-196 50-81 (190)
83 KOG2100 Dipeptidyl aminopeptid 89.1 0.98 2.1E-05 50.9 7.3 144 48-224 499-647 (755)
84 cd00312 Esterase_lipase Estera 88.0 2.7 5.9E-05 44.7 9.6 39 156-195 157-195 (493)
85 PLN02454 triacylglycerol lipas 87.9 1.5 3.3E-05 45.5 7.1 67 153-222 206-272 (414)
86 PF10503 Esterase_phd: Esteras 86.9 2.8 6.1E-05 39.9 7.9 44 167-220 88-131 (220)
87 COG0657 Aes Esterase/lipase [L 86.7 4.4 9.6E-05 40.2 9.7 45 175-225 151-195 (312)
88 PF01764 Lipase_3: Lipase (cla 85.8 2 4.3E-05 37.0 5.9 62 154-221 45-106 (140)
89 PF07859 Abhydrolase_3: alpha/ 84.1 2.2 4.8E-05 39.4 5.7 63 155-223 48-112 (211)
90 cd00741 Lipase Lipase. Lipase 83.5 3.4 7.3E-05 36.4 6.4 44 154-200 9-52 (153)
91 PRK13604 luxD acyl transferase 81.7 14 0.0003 37.1 10.5 123 59-223 19-143 (307)
92 PF05677 DUF818: Chlamydia CHL 81.2 2.6 5.7E-05 42.5 5.2 61 124-192 170-231 (365)
93 cd00519 Lipase_3 Lipase (class 81.0 3.8 8.3E-05 38.8 6.2 60 154-221 109-168 (229)
94 PLN02571 triacylglycerol lipas 80.8 5.1 0.00011 41.7 7.3 68 154-222 205-276 (413)
95 PF08237 PE-PPE: PE-PPE domain 79.3 8.1 0.00018 36.9 7.7 86 127-220 4-89 (225)
96 PF02129 Peptidase_S15: X-Pro 79.1 2.6 5.6E-05 41.1 4.4 83 126-225 58-140 (272)
97 TIGR03502 lipase_Pla1_cef extr 78.9 6.5 0.00014 44.4 7.8 46 151-196 521-575 (792)
98 PF06057 VirJ: Bacterial virul 78.5 3.9 8.4E-05 37.9 5.0 64 150-222 45-108 (192)
99 KOG1454 Predicted hydrolase/ac 77.7 7.8 0.00017 39.2 7.5 66 126-200 87-152 (326)
100 COG4099 Predicted peptidase [G 77.6 21 0.00046 35.5 9.9 40 159-198 252-291 (387)
101 PRK10439 enterobactin/ferric e 76.7 15 0.00033 38.3 9.5 36 176-221 288-323 (411)
102 PRK05371 x-prolyl-dipeptidyl a 76.1 4.6 9.9E-05 45.7 5.8 83 125-223 279-375 (767)
103 KOG3101 Esterase D [General fu 75.7 29 0.00064 32.9 9.9 139 63-225 30-180 (283)
104 PLN02733 phosphatidylcholine-s 75.7 6.9 0.00015 41.3 6.6 53 136-196 130-182 (440)
105 PF02230 Abhydrolase_2: Phosph 74.2 10 0.00022 35.4 6.9 60 154-225 85-144 (216)
106 PRK10252 entF enterobactin syn 74.1 19 0.00041 43.1 10.7 103 76-220 1068-1170(1296)
107 PF11288 DUF3089: Protein of u 73.4 5.3 0.00011 37.6 4.5 44 155-200 76-119 (207)
108 PRK06765 homoserine O-acetyltr 72.8 16 0.00035 37.8 8.5 28 410-437 323-350 (389)
109 PF11144 DUF2920: Protein of u 72.6 7 0.00015 40.5 5.6 61 154-224 161-222 (403)
110 PLN02753 triacylglycerol lipas 71.6 11 0.00025 40.2 7.0 72 151-222 285-360 (531)
111 KOG1552 Predicted alpha/beta h 71.1 12 0.00027 36.2 6.5 79 126-225 89-167 (258)
112 PF05990 DUF900: Alpha/beta hy 70.4 8 0.00017 37.1 5.2 68 153-224 73-140 (233)
113 PLN02719 triacylglycerol lipas 69.6 13 0.00028 39.7 6.9 70 153-222 273-346 (518)
114 PF05728 UPF0227: Uncharacteri 69.2 6.9 0.00015 36.3 4.3 40 175-227 58-97 (187)
115 COG3319 Thioesterase domains o 69.0 46 0.001 32.5 10.2 89 77-201 1-90 (257)
116 smart00824 PKS_TE Thioesterase 67.4 28 0.00061 31.2 8.1 75 126-219 26-100 (212)
117 KOG3975 Uncharacterized conser 66.2 11 0.00025 36.4 5.1 103 73-201 26-131 (301)
118 PF05577 Peptidase_S28: Serine 65.6 9.4 0.0002 40.0 5.1 91 126-228 60-155 (434)
119 PLN02324 triacylglycerol lipas 64.0 22 0.00047 37.1 7.1 47 153-200 193-239 (415)
120 PLN02761 lipase class 3 family 63.5 21 0.00046 38.2 7.0 70 153-222 268-343 (527)
121 KOG2183 Prolylcarboxypeptidase 62.7 13 0.00029 38.5 5.2 65 126-193 112-184 (492)
122 KOG2281 Dipeptidyl aminopeptid 62.2 25 0.00054 38.5 7.2 119 74-231 640-772 (867)
123 PF12146 Hydrolase_4: Putative 60.6 30 0.00066 27.0 5.9 78 60-164 2-79 (79)
124 PF03283 PAE: Pectinacetyleste 60.5 73 0.0016 32.7 10.3 153 59-222 34-198 (361)
125 PF05448 AXE1: Acetyl xylan es 58.9 48 0.001 33.4 8.5 147 52-222 59-210 (320)
126 COG2272 PnbA Carboxylesterase 57.5 66 0.0014 34.2 9.4 34 160-194 165-198 (491)
127 PRK14566 triosephosphate isome 56.2 27 0.00058 34.2 5.9 60 154-224 189-248 (260)
128 PF06342 DUF1057: Alpha/beta h 55.9 2.2E+02 0.0047 28.4 12.0 102 72-220 31-136 (297)
129 PRK04940 hypothetical protein; 55.7 27 0.00059 32.1 5.5 38 176-226 60-97 (180)
130 PRK14567 triosephosphate isome 54.7 32 0.00069 33.5 6.1 60 154-224 179-238 (253)
131 COG0400 Predicted esterase [Ge 54.3 51 0.0011 31.0 7.3 78 153-241 77-157 (207)
132 COG0429 Predicted hydrolase of 53.7 1.8E+02 0.004 29.5 11.3 129 49-220 51-185 (345)
133 KOG4627 Kynurenine formamidase 53.4 21 0.00046 33.7 4.4 73 136-223 102-174 (270)
134 PF11187 DUF2974: Protein of u 52.4 20 0.00043 34.2 4.3 39 158-200 70-108 (224)
135 PLN02408 phospholipase A1 51.8 23 0.00051 36.3 4.9 46 154-200 179-224 (365)
136 PLN00413 triacylglycerol lipas 51.1 18 0.0004 38.2 4.1 39 158-199 269-307 (479)
137 PLN02310 triacylglycerol lipas 50.6 35 0.00076 35.5 6.0 64 154-222 186-250 (405)
138 PLN02802 triacylglycerol lipas 50.6 36 0.00077 36.4 6.1 46 154-200 309-354 (509)
139 PF00151 Lipase: Lipase; Inte 50.3 4.2 9E-05 41.2 -0.7 70 125-199 104-173 (331)
140 PLN02847 triacylglycerol lipas 49.8 34 0.00073 37.4 5.8 62 155-224 233-295 (633)
141 PF10081 Abhydrolase_9: Alpha/ 47.2 22 0.00048 35.1 3.7 39 152-190 85-123 (289)
142 PLN02934 triacylglycerol lipas 46.6 30 0.00065 37.0 4.9 41 157-200 305-345 (515)
143 PF06259 Abhydrolase_8: Alpha/ 44.1 39 0.00085 31.0 4.7 65 124-196 62-129 (177)
144 KOG1553 Predicted alpha/beta h 44.0 52 0.0011 33.5 5.8 60 148-222 287-346 (517)
145 PLN02162 triacylglycerol lipas 43.9 30 0.00066 36.6 4.4 39 158-199 263-301 (475)
146 TIGR01836 PHA_synth_III_C poly 43.7 36 0.00078 34.3 4.9 28 410-437 286-313 (350)
147 KOG4569 Predicted lipase [Lipi 43.6 46 0.001 33.7 5.6 57 158-220 156-212 (336)
148 PLN02429 triosephosphate isome 43.6 53 0.0012 33.0 5.9 60 154-224 239-299 (315)
149 PF05057 DUF676: Putative seri 43.3 43 0.00094 31.5 5.1 50 151-201 54-103 (217)
150 KOG3079 Uridylate kinase/adeny 43.3 13 0.00028 34.4 1.4 16 74-89 5-20 (195)
151 COG3208 GrsT Predicted thioest 42.6 33 0.00071 33.1 4.0 66 126-201 34-99 (244)
152 PF06708 DUF1195: Protein of u 42.5 30 0.00065 30.2 3.3 25 1-25 32-56 (157)
153 COG4757 Predicted alpha/beta h 41.9 50 0.0011 31.8 5.1 67 126-196 58-125 (281)
154 COG2945 Predicted hydrolase of 39.0 35 0.00076 31.8 3.5 57 136-199 70-126 (210)
155 COG0627 Predicted esterase [Ge 38.9 84 0.0018 31.7 6.5 130 76-224 54-190 (316)
156 KOG2984 Predicted hydrolase [G 38.7 48 0.001 31.3 4.3 107 51-196 25-134 (277)
157 PLN03037 lipase class 3 family 38.2 66 0.0014 34.6 5.9 46 155-200 296-342 (525)
158 PLN02561 triosephosphate isome 37.6 72 0.0016 31.1 5.6 59 154-223 180-239 (253)
159 PF00326 Peptidase_S9: Prolyl 36.4 34 0.00074 31.5 3.2 32 409-440 143-174 (213)
160 PF08840 BAAT_C: BAAT / Acyl-C 36.0 28 0.0006 32.7 2.5 35 164-198 10-44 (213)
161 PF08386 Abhydrolase_4: TAP-li 35.4 39 0.00085 27.8 3.0 28 411-438 35-62 (103)
162 PF12740 Chlorophyllase2: Chlo 32.6 99 0.0022 30.2 5.7 64 151-221 62-131 (259)
163 PF03403 PAF-AH_p_II: Platelet 32.1 32 0.0007 35.5 2.4 38 177-225 229-266 (379)
164 PF07849 DUF1641: Protein of u 30.6 21 0.00044 24.6 0.4 17 358-374 15-31 (42)
165 KOG1516 Carboxylesterase and r 30.4 3.1E+02 0.0068 29.4 9.8 35 160-195 180-214 (545)
166 PF00681 Plectin: Plectin repe 30.3 38 0.00083 23.4 1.8 33 218-250 11-43 (45)
167 cd00311 TIM Triosephosphate is 29.6 1.4E+02 0.0031 28.8 6.2 59 154-224 176-235 (242)
168 PF01083 Cutinase: Cutinase; 28.3 1.5E+02 0.0032 27.1 5.9 80 128-222 42-124 (179)
169 PRK13604 luxD acyl transferase 28.2 72 0.0016 32.0 4.0 28 410-437 202-229 (307)
170 PF07819 PGAP1: PGAP1-like pro 28.1 76 0.0017 30.1 4.1 35 154-188 61-97 (225)
171 COG5153 CVT17 Putative lipase 28.0 34 0.00073 33.8 1.6 35 161-195 261-295 (425)
172 KOG4540 Putative lipase essent 28.0 34 0.00073 33.8 1.6 35 161-195 261-295 (425)
173 PF12695 Abhydrolase_5: Alpha/ 27.3 1.1E+02 0.0023 25.7 4.5 33 405-437 99-131 (145)
174 PF09292 Neil1-DNA_bind: Endon 26.6 37 0.00081 22.6 1.1 12 76-87 24-35 (39)
175 PRK00042 tpiA triosephosphate 26.4 1.8E+02 0.0038 28.3 6.3 59 154-224 180-239 (250)
176 PF03583 LIP: Secretory lipase 26.1 59 0.0013 32.2 3.0 31 410-440 219-249 (290)
177 TIGR01838 PHA_synth_I poly(R)- 25.9 3.3E+02 0.0072 29.5 8.9 84 126-224 221-305 (532)
178 KOG3877 NADH:ubiquinone oxidor 25.4 75 0.0016 31.4 3.4 48 124-188 69-116 (393)
179 PTZ00333 triosephosphate isome 25.2 1.5E+02 0.0033 28.8 5.6 59 154-223 183-242 (255)
180 KOG3724 Negative regulator of 25.2 95 0.0021 35.1 4.5 97 75-192 89-198 (973)
181 PF03583 LIP: Secretory lipase 24.6 2.1E+02 0.0045 28.3 6.6 66 155-225 47-117 (290)
182 PF06414 Zeta_toxin: Zeta toxi 24.5 53 0.0011 30.3 2.2 25 73-97 11-37 (199)
183 COG3571 Predicted hydrolase of 24.4 79 0.0017 28.8 3.1 28 172-199 85-112 (213)
184 COG2819 Predicted hydrolase of 24.2 6E+02 0.013 24.9 9.4 37 156-192 113-153 (264)
185 PF10503 Esterase_phd: Esteras 23.9 71 0.0015 30.4 3.0 26 410-435 169-194 (220)
186 KOG2382 Predicted alpha/beta h 23.9 1.2E+02 0.0026 30.5 4.7 90 69-187 45-134 (315)
187 PF12532 DUF3732: Protein of u 23.3 1.3E+02 0.0028 28.0 4.5 45 126-170 101-152 (193)
188 COG4425 Predicted membrane pro 22.4 1.1E+02 0.0025 32.2 4.2 36 153-188 374-409 (588)
189 PF02450 LCAT: Lecithin:choles 22.2 39 0.00084 35.0 0.9 41 155-199 102-142 (389)
190 PF00756 Esterase: Putative es 22.1 63 0.0014 30.4 2.3 56 155-224 98-153 (251)
191 PRK14731 coaE dephospho-CoA ki 21.6 93 0.002 29.0 3.3 31 76-106 4-36 (208)
192 PRK01184 hypothetical protein; 21.5 67 0.0015 28.9 2.3 27 78-104 2-30 (184)
193 PF08538 DUF1749: Protein of u 21.3 2.1E+02 0.0045 28.7 5.7 71 151-226 82-153 (303)
194 PF10929 DUF2811: Protein of u 21.2 87 0.0019 23.1 2.3 21 155-175 6-26 (57)
195 PF06309 Torsin: Torsin; Inte 21.1 77 0.0017 27.4 2.3 17 73-89 49-65 (127)
196 PRK06762 hypothetical protein; 21.0 55 0.0012 28.9 1.5 21 77-97 2-24 (166)
197 PF13956 Ibs_toxin: Toxin Ibs, 20.8 32 0.0007 19.1 -0.0 6 12-17 5-10 (19)
198 PF15613 WHIM2: WSTF, HB1, Itc 20.5 1.3E+02 0.0028 20.3 2.8 27 61-87 12-38 (38)
199 PRK15492 triosephosphate isome 20.3 2.1E+02 0.0045 28.0 5.5 59 154-224 189-248 (260)
200 PF05414 DUF1717: Viral domain 20.2 63 0.0014 25.7 1.5 12 409-420 39-50 (101)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-103 Score=803.45 Aligned_cols=384 Identities=50% Similarity=0.927 Sum_probs=342.1
Q ss_pred cCCCCCCccccCCCCCCCCCCceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceec
Q 012473 25 HSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFE 104 (463)
Q Consensus 25 ~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~ 104 (463)
.+++++++|+.|||+.+++++++|||||+|++..+++|||||+||+++|++|||||||||||||||+.|+|.|+|||+|+
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVK 101 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEc
Confidence 46778899999999977899999999999998889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeec
Q 012473 105 APTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGES 184 (463)
Q Consensus 105 ~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GES 184 (463)
.+ +.+|+.|||||||.||||||||||||||||+++..++.++|+.+|+|++.||++||++||||++|||||+|||
T Consensus 102 ~~-----G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GES 176 (454)
T KOG1282|consen 102 YN-----GKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGES 176 (454)
T ss_pred CC-----CCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccc
Confidence 54 2589999999999999999999999999999888888889999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcccccccchhhhhcCCCCCHHHHHHHHHhccC---CCCC--C
Q 012473 185 YAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQG---NFYN--P 259 (463)
Q Consensus 185 YgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~~~~s~~~~~y~~gli~~~~~~~~~~~c~~---~~~~--~ 259 (463)
|||||||+||++|+++|+....+.|||||++||||++|+..|..++.+|+++||+|++++++.+++.|.. ++.. .
T Consensus 177 YAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~ 256 (454)
T KOG1282|consen 177 YAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDP 256 (454)
T ss_pred ccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCC
Confidence 9999999999999999976556789999999999999999999999999999999999999999999987 3333 3
Q ss_pred CchHHHHHHHHHH-HHhcCCCcccCccc-CcCCchhhHHHhhhccCCccccccCCCCCCcchhhhccCCCCCCCCCCCCC
Q 012473 260 LSEACDSKLSEVE-KDIAGLNMYDILEP-CYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDG 337 (463)
Q Consensus 260 ~~~~C~~~~~~i~-~~~~~in~Yni~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 337 (463)
....|..+++++. .+..+++.|+++.+ |.... + . ... +..
T Consensus 257 ~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~------------~--~-----~~~-------------~~~------ 298 (454)
T KOG1282|consen 257 SNTKCNKAVEEFDSKTTGDIDNYYILTPDCYPTS------------Y--E-----LKK-------------PTD------ 298 (454)
T ss_pred chhHHHHHHHHHHHHHhccCchhhhcchhhcccc------------c--c-----ccc-------------ccc------
Confidence 4678999999987 67778888888876 86421 0 0 000 000
Q ss_pred CCCCccccccCCCCCCCCchHHhhhcCcHHHHHhhcCCCCccccccccccccc--ccccccCchHHHHHHHhhcC-ceEE
Q 012473 338 IVPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDAGSMIKYHKNLTLRG-YRAL 414 (463)
Q Consensus 338 ~~~~~~~~~~~~~~~C~~~~~~~~yLN~~~Vr~ALhV~~~~~~~~w~~cs~~v--~~~~d~~~~~~~~~~LL~~g-irVL 414 (463)
...+++|++... ..|||+++||+||||+.... .+|+.|++.+ .|..+..+|++.+..++.++ +|||
T Consensus 299 ---------~~~~~~c~~~~~-~~ylN~~~VrkALh~~~~~~-~~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvl 367 (454)
T KOG1282|consen 299 ---------CYGYDPCLSDYA-EKYLNRPEVRKALHANKTSI-GKWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVL 367 (454)
T ss_pred ---------ccccCCchhhhH-HHhcCCHHHHHHhCCCCCCC-CcccccChhhhcccccCccchHHHHHHHhhcCceEEE
Confidence 012478887655 78999999999999998753 2799999998 57788889999999998865 9999
Q ss_pred EEecCCccccCchhHHHHHHhcCCCCccceeeeeeC-CEEeEEEEEecc
Q 012473 415 IFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSN-GQVAGYFLQLCI 462 (463)
Q Consensus 415 iY~Gd~D~icn~~Gte~wi~~L~w~~~~~~~~W~~~-~~v~Gyvk~y~~ 462 (463)
||+||.|++||++||++||++|+++..++||||+++ +|||||+|+|++
T Consensus 368 iysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ 416 (454)
T KOG1282|consen 368 IYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGG 416 (454)
T ss_pred EEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecC
Confidence 999999999999999999999999999999999996 899999999986
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=4.4e-94 Score=742.90 Aligned_cols=387 Identities=40% Similarity=0.827 Sum_probs=332.6
Q ss_pred HHhhccCCCCCCccccCCCCCCCCCCceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcC
Q 012473 20 FSVLTHSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHG 99 (463)
Q Consensus 20 ~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~G 99 (463)
+++++.++++.++|++|||+.++++++++|||++|++..+++||||||||+++|+++||+|||||||||||+.|+|.|+|
T Consensus 12 ~~~~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~G 91 (437)
T PLN02209 12 LLVSSHHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENG 91 (437)
T ss_pred HHHhcccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcC
Confidence 44556778888999999999778999999999999877789999999999999999999999999999999999999999
Q ss_pred CceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEE
Q 012473 100 PFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFF 179 (463)
Q Consensus 100 P~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~y 179 (463)
||+++.++.++...+++.||+||++.|||||||||+||||||+++.... .+++++|+++++||+.||++||+|+++|+|
T Consensus 92 P~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~y 170 (437)
T PLN02209 92 PLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFY 170 (437)
T ss_pred CceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEE
Confidence 9999865322223589999999999999999999999999998765444 355567899999999999999999999999
Q ss_pred EEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcccccccchhhhhcCCCCCHHHHHHHHHhccCCCCC-
Q 012473 180 IAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN- 258 (463)
Q Consensus 180 i~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~~~~s~~~~~y~~gli~~~~~~~~~~~c~~~~~~- 258 (463)
|+||||||||||.||.+|+++|+....++||||||+||||++||..|..++.+|+|.+|+|++++++++++.|...+..
T Consensus 171 i~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~ 250 (437)
T PLN02209 171 VVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSV 250 (437)
T ss_pred EEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccC
Confidence 9999999999999999999988654456899999999999999999999999999999999999999999999753322
Q ss_pred -CCchHHHHHHHHHHHHhcCCCcccCc-ccCcCCchhhHHHhhhccCCccccccCCCCCCcchhhhccCCCCCCCCCCCC
Q 012473 259 -PLSEACDSKLSEVEKDIAGLNMYDIL-EPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRD 336 (463)
Q Consensus 259 -~~~~~C~~~~~~i~~~~~~in~Yni~-~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 336 (463)
+....|..+++++..|...++.|++. ..|.... . ++.
T Consensus 251 ~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~-----------------------~-~~~----------------- 289 (437)
T PLN02209 251 DPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDSN-----------------------T-QHI----------------- 289 (437)
T ss_pred CCChHHHHHHHHHHHHHhhcCCccccccccccccc-----------------------c-ccC-----------------
Confidence 34578999988888888888887654 3464210 0 000
Q ss_pred CCCCCccccccCCCCCCCC--chHHhhhcCcHHHHHhhcCCCCcccccccccccccccccccCchHHHHHHHhhcCceEE
Q 012473 337 GIVPSWPQLLNSNSVPCTD--DRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRAL 414 (463)
Q Consensus 337 ~~~~~~~~~~~~~~~~C~~--~~~~~~yLN~~~Vr~ALhV~~~~~~~~w~~cs~~v~~~~d~~~~~~~~~~LL~~girVL 414 (463)
...|.+ ...+..|||+++||+||||+.... ..|..|+..+.+..|..++++.+.++|++|+|||
T Consensus 290 -------------~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~~~~~~~~~~d~~~~~~~~~~~l~~girVL 355 (437)
T PLN02209 290 -------------SPDCYYYPYHLVECWANNESVREALHVDKGSI-GEWIRDHRGIPYKSDIRSSIPYHMNNSINGYRSL 355 (437)
T ss_pred -------------CCCcccccHHHHHHHhCCHHHHHHhCCCCCCC-CCCccccchhhcccchhhhHHHHHHHHhcCceEE
Confidence 034533 345678999999999999985432 5899999887788888777877777777899999
Q ss_pred EEecCCccccCchhHHHHHHhcCCCCccceeeeeeCCEEeEEEEEecc
Q 012473 415 IFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYFLQLCI 462 (463)
Q Consensus 415 iY~Gd~D~icn~~Gte~wi~~L~w~~~~~~~~W~~~~~v~Gyvk~y~~ 462 (463)
||+||.|+|||++|||+|+++|+|+++++|++|++++|++||+|+|+|
T Consensus 356 iY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n 403 (437)
T PLN02209 356 IFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSN 403 (437)
T ss_pred EEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCC
Confidence 999999999999999999999999999999999999999999999986
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=6.1e-94 Score=741.81 Aligned_cols=380 Identities=42% Similarity=0.858 Sum_probs=329.8
Q ss_pred cCCCCCCccccCCCCCCCCCCceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceec
Q 012473 25 HSAPETALIAQIPGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFE 104 (463)
Q Consensus 25 ~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~ 104 (463)
.+++..+.|++|||+.++++++++|||++|++..+.+|||||+||+++|+++||||||||||||||+.|+|.|+|||+++
T Consensus 15 ~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~ 94 (433)
T PLN03016 15 HHVDSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLK 94 (433)
T ss_pred hcccccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceee
Confidence 44567788999999977899999999999987667899999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeec
Q 012473 105 APTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGES 184 (463)
Q Consensus 105 ~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GES 184 (463)
.+...+...+++.||+||++.|||||||||+||||||+++.... .++.++|+++++||+.||++||+|+++|+||+|||
T Consensus 95 ~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GES 173 (433)
T PLN03016 95 FEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDS 173 (433)
T ss_pred ccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccC
Confidence 54222223689999999999999999999999999998765544 35556679999999999999999999999999999
Q ss_pred ccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcccccccchhhhhcCCCCCHHHHHHHHHhccCCCCC--CCch
Q 012473 185 YAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSE 262 (463)
Q Consensus 185 YgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~~~~s~~~~~y~~gli~~~~~~~~~~~c~~~~~~--~~~~ 262 (463)
|||||||.+|++|+++|+....++||||||+||||++||..|..++.+|+|.+|+|++++++++++.|...+.. ....
T Consensus 174 YaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~ 253 (433)
T PLN03016 174 YSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNT 253 (433)
T ss_pred ccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchH
Confidence 99999999999999988655556899999999999999999999999999999999999999999999764432 3457
Q ss_pred HHHHHHHHHHHHhcCCCcccCccc-CcCCchhhHHHhhhccCCccccccCCCCCCcchhhhccCCCCCCCCCCCCCCCCC
Q 012473 263 ACDSKLSEVEKDIAGLNMYDILEP-CYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPS 341 (463)
Q Consensus 263 ~C~~~~~~i~~~~~~in~Yni~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 341 (463)
.|..+++.+..+.+++|+||++.+ |... +.+
T Consensus 254 ~C~~~~~~~~~~~~~~n~yni~~~~~~~~---------------------------~~~--------------------- 285 (433)
T PLN03016 254 QCLKLTEEYHKCTAKINIHHILTPDCDVT---------------------------NVT--------------------- 285 (433)
T ss_pred HHHHHHHHHHHHhcCCChhhccCCccccc---------------------------ccC---------------------
Confidence 899999988888899999999966 5210 000
Q ss_pred ccccccCCCCCCCC--chHHhhhcCcHHHHHhhcCCCCcccccccccccccccccccCchHHHHHHHhhcCceEEEEecC
Q 012473 342 WPQLLNSNSVPCTD--DRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGD 419 (463)
Q Consensus 342 ~~~~~~~~~~~C~~--~~~~~~yLN~~~Vr~ALhV~~~~~~~~w~~cs~~v~~~~d~~~~~~~~~~LL~~girVLiY~Gd 419 (463)
...|+. ...++.|||+++||+||||+.... .+|+.|+..+.+..|..++++.+..++++|+|||||+||
T Consensus 286 --------~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~-~~w~~cn~~v~~~~d~~~~~~~~~~~l~~~irVLiY~Gd 356 (433)
T PLN03016 286 --------SPDCYYYPYHLIECWANDESVREALHIEKGSK-GKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGD 356 (433)
T ss_pred --------CCcccccchHHHHHHhCCHHHHHHhCCCCCCC-CCCccCCcccccccccchhhHHHHHHHhcCceEEEEECC
Confidence 034543 245678999999999999985311 489999999888778777787777777789999999999
Q ss_pred CccccCchhHHHHHHhcCCCCccceeeeeeCCEEeEEEEEecc
Q 012473 420 HDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYFLQLCI 462 (463)
Q Consensus 420 ~D~icn~~Gte~wi~~L~w~~~~~~~~W~~~~~v~Gyvk~y~~ 462 (463)
.|++||++|||+|+++|+|++.++|++|+++++++||+|+|+|
T Consensus 357 ~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n 399 (433)
T PLN03016 357 HDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSN 399 (433)
T ss_pred ccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCC
Confidence 9999999999999999999999999999999999999999975
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=4.5e-89 Score=708.05 Aligned_cols=371 Identities=37% Similarity=0.725 Sum_probs=302.6
Q ss_pred CCCCCCCCCceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeE
Q 012473 37 PGFSGNLPSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLH 116 (463)
Q Consensus 37 pg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~ 116 (463)
||+..++++++|||||+|+++.+++||||||||+++|+++||||||||||||||+.|+|+|+|||+++.+ +..+++
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~----~~~~l~ 76 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPD----GPYTLE 76 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETT----STSEEE
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeec----cccccc
Confidence 8887789999999999999777899999999999999999999999999999999999999999999942 237999
Q ss_pred ecCCCcccccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 117 VNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 117 ~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
.||+||++.|||||||||+||||||+++...+..+++++|+++++||+.||.+||+|+++|+||+||||||||||.||.+
T Consensus 77 ~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 77 DNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp E-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 99999999999999999999999999877766779999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCceeeeeeeeccCcCCcccccccchhhhhcCCCCCHHHHHHHHHhccCC-CCCCCchHHHHHHHHHHH--
Q 012473 197 VMKGIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGN-FYNPLSEACDSKLSEVEK-- 273 (463)
Q Consensus 197 i~~~n~~~~~~~inLkGi~iGNg~~dp~~~~~s~~~~~y~~gli~~~~~~~~~~~c~~~-~~~~~~~~C~~~~~~i~~-- 273 (463)
|+++++.+..+.||||||+||||++||..|..++.+|+|.+|+|++++++.+.+.|... ........|.++.+.+..
T Consensus 157 i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 236 (415)
T PF00450_consen 157 ILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQY 236 (415)
T ss_dssp HHHHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHC
T ss_pred hhhccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhc
Confidence 99999766557899999999999999999999999999999999999999999999643 122345789988887765
Q ss_pred ----HhcCCCcccCcccCcCCchhhHHHhhhccCCccccccCCCCCCcchhhhccCCCCCCCCCCCCCCCCCccccccCC
Q 012473 274 ----DIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSN 349 (463)
Q Consensus 274 ----~~~~in~Yni~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (463)
+..++|+||++.+|.... . ...+ .. .
T Consensus 237 ~~~~~~~~~n~Ydi~~~~~~~~----------------~------~~~~--------------~~--------------~ 266 (415)
T PF00450_consen 237 AISQCNGGINPYDIRQPCYNPS----------------R------SSYD--------------NS--------------P 266 (415)
T ss_dssp HHHHHHTTSETTSTTSEETT-S----------------H------CTTC--------------CC--------------C
T ss_pred ccccccCCcceeeeeccccccc----------------c------cccc--------------cc--------------c
Confidence 346899999999874310 0 0000 00 0
Q ss_pred CCCCCCchHHhhhcCcHHHHHhhcCCC-Ccccccccccccccc---ccccc-CchHHHHHHHhhcCceEEEEecCCcccc
Q 012473 350 SVPCTDDRVATLWLNDAAVRTAIHAEP-ESIAGSWELCTDRIL---FEHDA-GSMIKYHKNLTLRGYRALIFSGDHDMCV 424 (463)
Q Consensus 350 ~~~C~~~~~~~~yLN~~~Vr~ALhV~~-~~~~~~w~~cs~~v~---~~~d~-~~~~~~~~~LL~~girVLiY~Gd~D~ic 424 (463)
...|.....+..|||+++||+||||+. .. ..|+.|++.|. ...|. .++++.++.||++++|||||+||.|++|
T Consensus 267 ~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~--~~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~ 344 (415)
T PF00450_consen 267 SNDPPDDDYLEAYLNRPDVREALHVPVDSN--VNWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLIC 344 (415)
T ss_dssp TTTTTCHHHHHHHHTSHHHHHHTT-STTTS--SS--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS
T ss_pred cccccchhhHHHHhccHHHHHhhCCCcccC--CcccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEE
Confidence 134556677889999999999999973 22 59999999872 23343 5778999999999999999999999999
Q ss_pred CchhHHHHHHhcCCCCccceeeeee--CCEEeEEEEEeccC
Q 012473 425 PFTGSEAWTRSVGYKIVDKWRPWTS--NGQVAGYFLQLCIY 463 (463)
Q Consensus 425 n~~Gte~wi~~L~w~~~~~~~~W~~--~~~v~Gyvk~y~~~ 463 (463)
|++|+++|+++|+|+++++|++|.. +++++||+|+|+||
T Consensus 345 n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~l 385 (415)
T PF00450_consen 345 NFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNL 385 (415)
T ss_dssp -HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTE
T ss_pred EeccchhhhhccccCcccccccccccccccccceeEEeccE
Confidence 9999999999999999999999988 88999999999885
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.2e-83 Score=670.66 Aligned_cols=350 Identities=29% Similarity=0.585 Sum_probs=294.2
Q ss_pred CCCCCceEEEEEEecC-CCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecC
Q 012473 41 GNLPSKHYSGYVTVDE-SHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNP 119 (463)
Q Consensus 41 ~~~~~~~~sGy~~v~~-~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~ 119 (463)
.+.++++|||||+|++ ..+.+||||||||+++|+++||+|||||||||||+.|+|.|+|||+++.++ .+++.||
T Consensus 41 ~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~-----~~~~~n~ 115 (462)
T PTZ00472 41 CDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETT-----GDIYNNT 115 (462)
T ss_pred cCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCC-----CceeECC
Confidence 4557899999999975 457899999999999999999999999999999999999999999999642 5799999
Q ss_pred CCcccccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHh
Q 012473 120 YSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (463)
Q Consensus 120 ~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (463)
+||++.+||||||||+||||||+... .+..+++++|+++++||+.||++||+++.+|+||+||||||+|+|.+|.+|++
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~ 194 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINM 194 (462)
T ss_pred cccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHh
Confidence 99999999999999999999998654 45567889999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCceeeeeeeeccCcCCcccccccchhhhhc-------CCCCCHHHHHHHHHh---ccCC-----CCC-CCchH
Q 012473 200 GIDAGEKPVLNFKGYLVGNGVTDEEIDGNALVPFVHG-------MGLISDDLYEEVQNL---CQGN-----FYN-PLSEA 263 (463)
Q Consensus 200 ~n~~~~~~~inLkGi~iGNg~~dp~~~~~s~~~~~y~-------~gli~~~~~~~~~~~---c~~~-----~~~-~~~~~ 263 (463)
+|+.+...+||||||+|||||+||..|..++.+|+|. +|+|++++++++.+. |... ... .....
T Consensus 195 ~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~ 274 (462)
T PTZ00472 195 GNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSS 274 (462)
T ss_pred hccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchH
Confidence 9876656789999999999999999999999999995 589999999888753 4210 000 12234
Q ss_pred HHHHHHHHHH-----HhcCCCcccCcccCcCCchhhHHHhhhccCCccccccCCCCCCcchhhhccCCCCCCCCCCCCCC
Q 012473 264 CDSKLSEVEK-----DIAGLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGI 338 (463)
Q Consensus 264 C~~~~~~i~~-----~~~~in~Yni~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 338 (463)
|..+...+.+ ...++|+||++.+|..
T Consensus 275 c~~a~~~c~~~~~~~~~~g~n~Ydi~~~c~~------------------------------------------------- 305 (462)
T PTZ00472 275 CSVARALCNEYIAVYSATGLNNYDIRKPCIG------------------------------------------------- 305 (462)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhheeccCCC-------------------------------------------------
Confidence 5433222211 1245666666655521
Q ss_pred CCCccccccCCCCCCCCchHHhhhcCcHHHHHhhcCCCCccccccccccccc--ccccccC-chHHHHHHHhhcCceEEE
Q 012473 339 VPSWPQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDAG-SMIKYHKNLTLRGYRALI 415 (463)
Q Consensus 339 ~~~~~~~~~~~~~~C~~~~~~~~yLN~~~Vr~ALhV~~~~~~~~w~~cs~~v--~~~~d~~-~~~~~~~~LL~~girVLi 415 (463)
+.|++...+..|||+++||+||||+. .+|+.|++.| .+..|.. ++.+.++.||++|+||||
T Consensus 306 ------------~~c~~~~~~~~yLN~~~Vq~AL~v~~----~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLi 369 (462)
T PTZ00472 306 ------------PLCYNMDNTIAFMNREDVQSSLGVKP----ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMI 369 (462)
T ss_pred ------------CCccCHHHHHHHhCCHHHHHHhCCCC----CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEE
Confidence 45777667889999999999999984 3799999998 4556654 566889999999999999
Q ss_pred EecCCccccCchhHHHHHHhcCCCCccce-----eee-eeCCEEeEEEEEec
Q 012473 416 FSGDHDMCVPFTGSEAWTRSVGYKIVDKW-----RPW-TSNGQVAGYFLQLC 461 (463)
Q Consensus 416 Y~Gd~D~icn~~Gte~wi~~L~w~~~~~~-----~~W-~~~~~v~Gyvk~y~ 461 (463)
|+||.|++||++|+++|+++|+|+++++| ++| .++++++||+|+|+
T Consensus 370 YnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~ 421 (462)
T PTZ00472 370 YAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAA 421 (462)
T ss_pred EECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEe
Confidence 99999999999999999999999987654 899 46889999999998
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=5.1e-65 Score=510.31 Aligned_cols=280 Identities=41% Similarity=0.817 Sum_probs=239.9
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCC
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (463)
.|||||||||+||||||+++.... .+++++|++++.||+.||++||+|+++||||+||||||||||+||.+|+++|+.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765444 3555667999999999999999999999999999999999999999999988655
Q ss_pred CCCceeeeeeeeccCcCCcccccccchhhhhcCCCCCHHHHHHHHHhccCCCCC--CCchHHHHHHHHHHHHhcCCCccc
Q 012473 205 EKPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNLCQGNFYN--PLSEACDSKLSEVEKDIAGLNMYD 282 (463)
Q Consensus 205 ~~~~inLkGi~iGNg~~dp~~~~~s~~~~~y~~gli~~~~~~~~~~~c~~~~~~--~~~~~C~~~~~~i~~~~~~in~Yn 282 (463)
..++||||||+|||||+||..|..++.+|+|.+|+|++++++.+++.|...... +....|.++...+..+.+.+|+||
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 159 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHH 159 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhh
Confidence 556899999999999999999999999999999999999999999999754332 345689999988888888999999
Q ss_pred Cccc-CcCCchhhHHHhhhccCCccccccCCCCCCcchhhhccCCCCCCCCCCCCCCCCCccccccCCCCCCCC--chHH
Q 012473 283 ILEP-CYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTD--DRVA 359 (463)
Q Consensus 283 i~~~-C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--~~~~ 359 (463)
++.+ |... +.+ .+.|+. ...+
T Consensus 160 ~~~~~~~~~---------------------------~~~-----------------------------~~~c~~~~~~~~ 183 (319)
T PLN02213 160 ILTPDCDVT---------------------------NVT-----------------------------SPDCYYYPYHLI 183 (319)
T ss_pred cccCcccCc---------------------------cCC-----------------------------CCCcccchhHHH
Confidence 9855 5210 000 034553 2356
Q ss_pred hhhcCcHHHHHhhcCCCCcccccccccccccccccccCchHHHHHHHhhcCceEEEEecCCccccCchhHHHHHHhcCCC
Q 012473 360 TLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYK 439 (463)
Q Consensus 360 ~~yLN~~~Vr~ALhV~~~~~~~~w~~cs~~v~~~~d~~~~~~~~~~LL~~girVLiY~Gd~D~icn~~Gte~wi~~L~w~ 439 (463)
..|||+++||+||||+.... .+|+.|+..+.+..|..++++.+..+|.+|+||||||||.|++||++|+++|+++|+|+
T Consensus 184 ~~ylN~~~V~~aL~v~~~~~-~~w~~c~~~v~~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~ 262 (319)
T PLN02213 184 ECWANDESVREALHIEKGSK-GKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYS 262 (319)
T ss_pred HHHhCCHHHHHHhCcCCCCC-CCCccCCcccccccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCC
Confidence 89999999999999985311 48999999988888877777777677778999999999999999999999999999999
Q ss_pred CccceeeeeeCCEEeEEEEEecc
Q 012473 440 IVDKWRPWTSNGQVAGYFLQLCI 462 (463)
Q Consensus 440 ~~~~~~~W~~~~~v~Gyvk~y~~ 462 (463)
+.++|++|+++++++||+|+|+|
T Consensus 263 ~~~~~~~w~~~~~~~G~vk~y~~ 285 (319)
T PLN02213 263 PIHNWRPWMINNQIAGYTRAYSN 285 (319)
T ss_pred CCCCCccccCCCEeeeEEEEecC
Confidence 99999999999999999999976
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-58 Score=438.33 Aligned_cols=363 Identities=23% Similarity=0.414 Sum_probs=282.3
Q ss_pred EEEEEEecCCCCeeEEEEEeeccCC-CCCCCEEEEeCCCCCcchH-hhHhhhcCCceecCCCCCCCCCeeEecCCCcccc
Q 012473 48 YSGYVTVDESHGRNLFYYFVESEGN-PSKDPVVLWLNGGPGCSSF-DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKV 125 (463)
Q Consensus 48 ~sGy~~v~~~~~~~lfy~f~es~~~-~~~~Pl~lWlnGGPG~SS~-~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 125 (463)
-.||+++++ +.|+|||++-+..+ ...+|+.|||+||||+||. +|+|.|+||+..+ +.+|+.+|.+.
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~----------~~~r~~TWlk~ 71 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD----------GSPRDWTWLKD 71 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC----------CCcCCchhhhh
Confidence 479999996 79999999976533 3789999999999999986 7999999999877 46799999999
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
|+|||||+|||+||||++..+.|.++++++|.|+.+.|++||..||+|+..||||+-|||||+..+.+|..+....+++
T Consensus 72 adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G- 150 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG- 150 (414)
T ss_pred ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC-
Confidence 9999999999999999999899999999999999999999999999999999999999999999999999999988776
Q ss_pred CCceeeeeeeeccCcCCcccccccchhhhhcCCCCCHHHHHHHHHh---ccCCCCC---CCchHH-HHHHHHHHHHhcCC
Q 012473 206 KPVLNFKGYLVGNGVTDEEIDGNALVPFVHGMGLISDDLYEEVQNL---CQGNFYN---PLSEAC-DSKLSEVEKDIAGL 278 (463)
Q Consensus 206 ~~~inLkGi~iGNg~~dp~~~~~s~~~~~y~~gli~~~~~~~~~~~---c~~~~~~---~~~~~C-~~~~~~i~~~~~~i 278 (463)
+.+.|+.|+|+|++||+|.....++.+|++..+++|+..++...+. |.+.... ...+.| ..+...|.+...++
T Consensus 151 ~i~~nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~V 230 (414)
T KOG1283|consen 151 EIKLNFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGV 230 (414)
T ss_pred ceeecceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCc
Confidence 3679999999999999999999999999999999999988776653 3321111 011112 22333455667789
Q ss_pred CcccCcccCcCCchhhHHHhhhccCCccccccCCCCCCcchhhhccCCCCCCCCCCCCCCCCCccccccCCCCCCCCchH
Q 012473 279 NMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTDDRV 358 (463)
Q Consensus 279 n~Yni~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 358 (463)
+.||++.+.... .|+........+ +.+-+|. ..+. ..-.+.+.
T Consensus 231 dfYNil~~t~~d--~~~~ss~~~~~~----------~~~~rrl-------~~~~------------------~~~~~~D~ 273 (414)
T KOG1283|consen 231 DFYNILTKTLGD--QYSLSSRAAMTP----------EEVMRRL-------LVRF------------------VGDEDRDK 273 (414)
T ss_pred ceeeeeccCCCc--chhhhhhhhcch----------HHHHHHH-------Hhcc------------------CcchhHHH
Confidence 999999764322 111100000000 0000000 0000 00011234
Q ss_pred HhhhcCcHHHHHhhcCCCCccccccccccccc--cccccc-CchHHHHHHHhhcCceEEEEecCCccccCchhHHHHHHh
Q 012473 359 ATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDA-GSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRS 435 (463)
Q Consensus 359 ~~~yLN~~~Vr~ALhV~~~~~~~~w~~cs~~v--~~~~d~-~~~~~~~~~LL~~girVLiY~Gd~D~icn~~Gte~wi~~ 435 (463)
+.+++ +..||++|+|...- ..|...+..+ ....|. .+.+..+.+||++|++|.||||++|.||++.|+++|+++
T Consensus 274 L~~lM-~g~vrkkLgIip~~--~~wGgqsg~vFt~lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~ 350 (414)
T KOG1283|consen 274 LSDLM-NGPVRKKLGIIPGG--VKWGGQSGDVFTKLQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEK 350 (414)
T ss_pred HHHHh-cccccccccccCCC--CcccCcCCchHHHhhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhh
Confidence 55554 45699999998655 5899888876 555664 467789999999999999999999999999999999999
Q ss_pred cCCCCcccee--eee---eCCEEeEEEEEeccC
Q 012473 436 VGYKIVDKWR--PWT---SNGQVAGYFLQLCIY 463 (463)
Q Consensus 436 L~w~~~~~~~--~W~---~~~~v~Gyvk~y~~~ 463 (463)
|.|+....|. +|+ ++-..+||+|+|.|+
T Consensus 351 l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl 383 (414)
T KOG1283|consen 351 LEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNL 383 (414)
T ss_pred eecCCCCccccceeeeccceeecchhhhhhccc
Confidence 9999988774 443 455789999999985
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-58 Score=463.41 Aligned_cols=335 Identities=27% Similarity=0.462 Sum_probs=255.7
Q ss_pred eEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccc
Q 012473 61 NLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLS 140 (463)
Q Consensus 61 ~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfS 140 (463)
.+|||+|+++++|.++||||||||||||||+.|+|+|+||++|+.+. .+.--+||+||+.++||||||||+|||||
T Consensus 86 ~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~----~P~~~~NP~SW~~~adLvFiDqPvGTGfS 161 (498)
T COG2939 86 FFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGT----SPSYPDNPGSWLDFADLVFIDQPVGTGFS 161 (498)
T ss_pred eEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCC----CCCCCCCccccccCCceEEEecCcccCcc
Confidence 38899999999999999999999999999999999999999999752 11112799999999999999999999999
Q ss_pred cccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCC--CEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeecc
Q 012473 141 YSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLAN--PFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (463)
Q Consensus 141 y~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~--~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN 218 (463)
++ .......+-..+.+|+..|++.||+.||++.+. |+||+||||||+|+|.||.+|++++.. .+..+||++++|||
T Consensus 162 ~a-~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~-~~~~~nlssvlign 239 (498)
T COG2939 162 RA-LGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA-LNGNVNLSSVLIGN 239 (498)
T ss_pred cc-cccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc-cCCceEeeeeeecC
Confidence 97 233345566778899999999999999999887 999999999999999999999998632 23469999999999
Q ss_pred C-cCCcccccccchhhhhcC----CCCCHHHHHHHHHhccCCCCC---------CCchHHHHHHHHHHHHh------cC-
Q 012473 219 G-VTDEEIDGNALVPFVHGM----GLISDDLYEEVQNLCQGNFYN---------PLSEACDSKLSEVEKDI------AG- 277 (463)
Q Consensus 219 g-~~dp~~~~~s~~~~~y~~----gli~~~~~~~~~~~c~~~~~~---------~~~~~C~~~~~~i~~~~------~~- 277 (463)
| +|||..|+..|.+++... +..+.+..+++++.|.+++.. ..-..|..+...+...+ .+
T Consensus 240 g~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~ 319 (498)
T COG2939 240 GLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGG 319 (498)
T ss_pred CcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhccccc
Confidence 9 999999999999998744 456677888888888764422 11235555544433211 12
Q ss_pred --CCcccCcccCcCCchhhHHHhhhccCCccccccCCCCCCcchhhhccCCCCCCCCCCCCCCCCCccccccCCCCCCCC
Q 012473 278 --LNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQLLNSNSVPCTD 355 (463)
Q Consensus 278 --in~Yni~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 355 (463)
.|.|++.+.|.... + .-.|++
T Consensus 320 ~~~n~y~~r~~~~d~g------------------------------------------~---------------~~~~y~ 342 (498)
T COG2939 320 RLLNVYDIREECRDPG------------------------------------------L---------------GGSCYD 342 (498)
T ss_pred cccccccchhhcCCCC------------------------------------------c---------------cccccc
Confidence 45555554442210 0 023554
Q ss_pred c-hHHhhhcCcHHHHHhhcCCCCccccccccccccc--cc---ccccCc-hHHHHHHHhhcCceEEEEecCCccccCchh
Q 012473 356 D-RVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LF---EHDAGS-MIKYHKNLTLRGYRALIFSGDHDMCVPFTG 428 (463)
Q Consensus 356 ~-~~~~~yLN~~~Vr~ALhV~~~~~~~~w~~cs~~v--~~---~~d~~~-~~~~~~~LL~~girVLiY~Gd~D~icn~~G 428 (463)
. ....+|++...++++++... ..|..|+..+ +| ..+..+ ....+..++.+++.+++|.||.|.+||+.|
T Consensus 343 ~~~~~ld~~~~~~~~~~~~~~~----d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~ 418 (498)
T COG2939 343 TLSTSLDYFNFDPEQEVNDPEV----DNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRG 418 (498)
T ss_pred ceeeccccccccchhccccccc----cchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhh
Confidence 2 33467889888999888654 4799999886 55 344443 345567788899999999999999999999
Q ss_pred HHHHHHhcCCCCccce-----eeeee--CCEEeEEEEEecc
Q 012473 429 SEAWTRSVGYKIVDKW-----RPWTS--NGQVAGYFLQLCI 462 (463)
Q Consensus 429 te~wi~~L~w~~~~~~-----~~W~~--~~~v~Gyvk~y~~ 462 (463)
++.|..+|+|.++..| ++|.. ..+..|-+++|.|
T Consensus 419 ~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n 459 (498)
T COG2939 419 NMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRN 459 (498)
T ss_pred hcccCCcceEeeecchhhhcCCCcccccchhhcccccccCC
Confidence 9999999999998776 33433 3444444455544
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.05 E-value=2.8e-05 Score=73.73 Aligned_cols=107 Identities=21% Similarity=0.206 Sum_probs=73.6
Q ss_pred CCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChH
Q 012473 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDL 153 (463)
Q Consensus 74 ~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~ 153 (463)
++.|+||+++|.+|.+..+..+.+ .+ .+..+++.+|.| |.|.|....... .+.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~D~~-G~G~S~~~~~~~--~~~~ 64 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLD----------------VL-------TQRFHVVTYDHR-GTGRSPGELPPG--YSIA 64 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHH----------------HH-------HhccEEEEEcCC-CCCCCCCCCccc--CCHH
Confidence 467999999999777665533321 01 123689999988 999996432222 3556
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCc
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp 223 (463)
+.++++.++++.. ...+++|+|+|+||..+..+|.+..+ .++++++.+++..+
T Consensus 65 ~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 65 HMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCCC
Confidence 6677777777532 23579999999999999888875322 27888887776553
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=97.99 E-value=3.2e-05 Score=74.42 Aligned_cols=128 Identities=22% Similarity=0.314 Sum_probs=78.7
Q ss_pred EEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHh-hHhhhcCCceecCCCCCCCCCeeEecCCCcccccc
Q 012473 49 SGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS 127 (463)
Q Consensus 49 sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 127 (463)
.+++.++ +..+.|.-+. .+...|.||+++||||+++.+ ..+.+. +. + +-.+
T Consensus 4 ~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~----------------l~-~-----~g~~ 55 (288)
T TIGR01250 4 EGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL----------------LK-E-----EGRE 55 (288)
T ss_pred cceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH----------------HH-h-----cCCE
Confidence 4566665 3344443322 223357889999999998653 333211 11 0 1378
Q ss_pred eeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCC
Q 012473 128 IIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKP 207 (463)
Q Consensus 128 llfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~ 207 (463)
++.+|.| |.|.|..........+.+..++++..+++. +...+++|.|+|+||..+..+|..-
T Consensus 56 vi~~d~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~---------- 117 (288)
T TIGR01250 56 VIMYDQL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY---------- 117 (288)
T ss_pred EEEEcCC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC----------
Confidence 9999988 999986432211012445566666655543 2235699999999999988888752
Q ss_pred ceeeeeeeeccCcCC
Q 012473 208 VLNFKGYLVGNGVTD 222 (463)
Q Consensus 208 ~inLkGi~iGNg~~d 222 (463)
.-.++++++.++...
T Consensus 118 p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 118 GQHLKGLIISSMLDS 132 (288)
T ss_pred ccccceeeEeccccc
Confidence 123788888877643
No 11
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=97.97 E-value=5.1e-05 Score=74.92 Aligned_cols=122 Identities=17% Similarity=0.141 Sum_probs=83.5
Q ss_pred EEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceee
Q 012473 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (463)
Q Consensus 51 y~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (463)
|++++ +.+++|.- . .+ ..|.||+|+|.++.+..+-.+.+. +.+..+++.
T Consensus 12 ~~~~~---~~~i~y~~--~-G~--~~~~vlllHG~~~~~~~w~~~~~~-----------------------L~~~~~vi~ 60 (294)
T PLN02824 12 TWRWK---GYNIRYQR--A-GT--SGPALVLVHGFGGNADHWRKNTPV-----------------------LAKSHRVYA 60 (294)
T ss_pred eEEEc---CeEEEEEE--c-CC--CCCeEEEECCCCCChhHHHHHHHH-----------------------HHhCCeEEE
Confidence 66665 56666543 1 11 237899999999988887554421 123468999
Q ss_pred ecCCCCcccccccCCC----CcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCC
Q 012473 131 LDSPAGVGLSYSENKT----DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (463)
Q Consensus 131 iDqP~G~GfSy~~~~~----~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (463)
+|.| |.|.|...+.. ....+.++.|+++.++|... ...+++|.|+|.||..+-.+|.+-.+
T Consensus 61 ~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~------- 125 (294)
T PLN02824 61 IDLL-GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE------- 125 (294)
T ss_pred EcCC-CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh-------
Confidence 9999 99999754321 11235567788888877643 23589999999999999888865322
Q ss_pred CceeeeeeeeccCcC
Q 012473 207 PVLNFKGYLVGNGVT 221 (463)
Q Consensus 207 ~~inLkGi~iGNg~~ 221 (463)
.++++++.|+..
T Consensus 126 ---~v~~lili~~~~ 137 (294)
T PLN02824 126 ---LVRGVMLINISL 137 (294)
T ss_pred ---heeEEEEECCCc
Confidence 378999888754
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=97.96 E-value=7.4e-05 Score=72.91 Aligned_cols=123 Identities=15% Similarity=0.145 Sum_probs=81.1
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCccc-ccceeeecCCCCc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK-VSSIIYLDSPAGV 137 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiDqP~G~ 137 (463)
|..|++.++++. +..+|+||.++|..++|..+-.+.+. +.+ -..++-+|.| |.
T Consensus 10 g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~~~-----------------------l~~~g~~via~D~~-G~ 63 (276)
T PHA02857 10 NDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELAEN-----------------------ISSLGILVFSHDHI-GH 63 (276)
T ss_pred CCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHHHH-----------------------HHhCCCEEEEccCC-CC
Confidence 678999877764 34469999999997776665443311 112 2678999988 99
Q ss_pred ccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeec
Q 012473 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (463)
Q Consensus 138 GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 217 (463)
|.|...... ..+-....+++.+++..+-+.++ ..+++|+|+|.||..+..+|.+- .-+++|+++.
T Consensus 64 G~S~~~~~~--~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~~----------p~~i~~lil~ 128 (276)
T PHA02857 64 GRSNGEKMM--IDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYKN----------PNLFTAMILM 128 (276)
T ss_pred CCCCCccCC--cCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHhC----------ccccceEEEe
Confidence 999542211 12333445667777765444443 46899999999998666666431 1248999999
Q ss_pred cCcCC
Q 012473 218 NGVTD 222 (463)
Q Consensus 218 Ng~~d 222 (463)
+|.++
T Consensus 129 ~p~~~ 133 (276)
T PHA02857 129 SPLVN 133 (276)
T ss_pred ccccc
Confidence 88765
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.92 E-value=8e-05 Score=71.98 Aligned_cols=123 Identities=17% Similarity=0.093 Sum_probs=79.8
Q ss_pred EEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceee
Q 012473 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (463)
Q Consensus 51 y~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (463)
|+.++ +.+++|. +. .+.+.|.||+++|.+|.+..+..+.+ .| .+..+++.
T Consensus 10 ~~~~~---~~~~~~~--~~--g~~~~~~vv~~hG~~~~~~~~~~~~~----------------~l-------~~~~~vi~ 59 (278)
T TIGR03056 10 RVTVG---PFHWHVQ--DM--GPTAGPLLLLLHGTGASTHSWRDLMP----------------PL-------ARSFRVVA 59 (278)
T ss_pred eeeEC---CEEEEEE--ec--CCCCCCeEEEEcCCCCCHHHHHHHHH----------------HH-------hhCcEEEe
Confidence 44554 4555543 22 33446899999999877666543321 11 12368999
Q ss_pred ecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCcee
Q 012473 131 LDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN 210 (463)
Q Consensus 131 iDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in 210 (463)
+|.| |.|.|...... ..+-+..++++.++++. +...+++|.|+|+||..+..+|.+- .-.
T Consensus 60 ~D~~-G~G~S~~~~~~--~~~~~~~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~ 119 (278)
T TIGR03056 60 PDLP-GHGFTRAPFRF--RFTLPSMAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG----------PVT 119 (278)
T ss_pred ecCC-CCCCCCCcccc--CCCHHHHHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC----------Ccc
Confidence 9988 99998643321 23556677777777753 2235789999999998777776542 123
Q ss_pred eeeeeeccCcCCc
Q 012473 211 FKGYLVGNGVTDE 223 (463)
Q Consensus 211 LkGi~iGNg~~dp 223 (463)
++++++.++..++
T Consensus 120 v~~~v~~~~~~~~ 132 (278)
T TIGR03056 120 PRMVVGINAALMP 132 (278)
T ss_pred cceEEEEcCcccc
Confidence 7888888887654
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.88 E-value=0.00017 Score=71.53 Aligned_cols=139 Identities=22% Similarity=0.272 Sum_probs=87.0
Q ss_pred CccccCCCCCCCCCCceEEEEEEecCCCCe--eEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCC
Q 012473 31 ALIAQIPGFSGNLPSKHYSGYVTVDESHGR--NLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTT 108 (463)
Q Consensus 31 ~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~--~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~ 108 (463)
.++++||.+ ++ .-.|+.++...+. +++|.- ..++ +.|.||.++|.|+.+..+..+. |.. .
T Consensus 9 ~~~~~~~~~----~~--~~~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~w~~~~---~~L-~---- 70 (302)
T PRK00870 9 SRFENLPDY----PF--APHYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYLYRKMI---PIL-A---- 70 (302)
T ss_pred ccccCCcCC----CC--CceeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhhHHHHH---HHH-H----
Confidence 456677765 22 4567888753333 566552 2333 4578899999988777764443 211 1
Q ss_pred CCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeeccccc
Q 012473 109 KGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGI 188 (463)
Q Consensus 109 ~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~ 188 (463)
. +-.+++.+|.| |.|.|-..... ...+.+..++++.++|+. +...++.|.|+|+||.
T Consensus 71 --------~------~gy~vi~~Dl~-G~G~S~~~~~~-~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ 127 (302)
T PRK00870 71 --------A------AGHRVIAPDLI-GFGRSDKPTRR-EDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGL 127 (302)
T ss_pred --------h------CCCEEEEECCC-CCCCCCCCCCc-ccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHH
Confidence 0 13689999988 99998432111 113445666666666653 2235799999999999
Q ss_pred chHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 189 YVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 189 yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
.+-.+|.+-. =.++++++.++.
T Consensus 128 ia~~~a~~~p----------~~v~~lvl~~~~ 149 (302)
T PRK00870 128 IGLRLAAEHP----------DRFARLVVANTG 149 (302)
T ss_pred HHHHHHHhCh----------hheeEEEEeCCC
Confidence 8888886521 127888877654
No 15
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=97.86 E-value=0.00012 Score=72.92 Aligned_cols=126 Identities=22% Similarity=0.331 Sum_probs=77.2
Q ss_pred EEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccce
Q 012473 49 SGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSI 128 (463)
Q Consensus 49 sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anl 128 (463)
.+|+.+.+ +..++|.-. ..+.. |-||.++|+||.++..... .+ + . .+..++
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~~-~~lvllHG~~~~~~~~~~~----~~-------------~--~----~~~~~v 56 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPDG-KPVVFLHGGPGSGTDPGCR----RF-------------F--D----PETYRI 56 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCCC-CEEEEECCCCCCCCCHHHH----hc-------------c--C----ccCCEE
Confidence 57888875 667877542 22333 4468899999976532110 00 0 0 134789
Q ss_pred eeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCc
Q 012473 129 IYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPV 208 (463)
Q Consensus 129 lfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~ 208 (463)
+.+|.| |.|.|..... ....+..+.++++..+++. . ...++++.|+|+||..+..+|.+-.
T Consensus 57 i~~D~~-G~G~S~~~~~-~~~~~~~~~~~dl~~l~~~----l---~~~~~~lvG~S~GG~ia~~~a~~~p---------- 117 (306)
T TIGR01249 57 VLFDQR-GCGKSTPHAC-LEENTTWDLVADIEKLREK----L---GIKNWLVFGGSWGSTLALAYAQTHP---------- 117 (306)
T ss_pred EEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH----c---CCCCEEEEEECHHHHHHHHHHHHCh----------
Confidence 999988 9999964321 1122344555555555432 2 2347999999999987777776532
Q ss_pred eeeeeeeeccCcCC
Q 012473 209 LNFKGYLVGNGVTD 222 (463)
Q Consensus 209 inLkGi~iGNg~~d 222 (463)
-.++++++.+..+.
T Consensus 118 ~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 118 EVVTGLVLRGIFLL 131 (306)
T ss_pred HhhhhheeeccccC
Confidence 13678887776654
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.73 E-value=0.00015 Score=69.42 Aligned_cols=104 Identities=18% Similarity=0.109 Sum_probs=74.5
Q ss_pred CCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCccc
Q 012473 71 GNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVT 150 (463)
Q Consensus 71 ~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~ 150 (463)
+.+.+.|.||+++|.+|.+..+..+.+. +.+..+++.+|.| |.|.|.... . .
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~~~~~~~-----------------------l~~~~~vi~~D~~-G~G~s~~~~--~--~ 62 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNLGVLARD-----------------------LVNDHDIIQVDMR-NHGLSPRDP--V--M 62 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHHHHHHHH-----------------------HhhCCeEEEECCC-CCCCCCCCC--C--C
Confidence 4566789999999998887766444311 1234799999999 999886422 2 3
Q ss_pred ChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccC
Q 012473 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (463)
Q Consensus 151 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 219 (463)
+.++.++++.++|..+ ...++.|.|+|.||..+..+|.+-.+ .++++++.++
T Consensus 63 ~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~----------~v~~lvli~~ 114 (255)
T PRK10673 63 NYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPD----------RIDKLVAIDI 114 (255)
T ss_pred CHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHh----------hcceEEEEec
Confidence 5567788888888752 23479999999999999888866322 2778777653
No 17
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.70 E-value=0.00027 Score=71.12 Aligned_cols=139 Identities=19% Similarity=0.152 Sum_probs=84.6
Q ss_pred ceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCccc-
Q 012473 46 KHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK- 124 (463)
Q Consensus 46 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~- 124 (463)
+...+++...+ +..++|+-.........+|+||+++|..+.++ + .+.+.. ..+.+
T Consensus 31 ~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~-~-~~~~~~--------------------~~L~~~ 86 (330)
T PLN02298 31 KGSKSFFTSPR--GLSLFTRSWLPSSSSPPRALIFMVHGYGNDIS-W-TFQSTA--------------------IFLAQM 86 (330)
T ss_pred ccccceEEcCC--CCEEEEEEEecCCCCCCceEEEEEcCCCCCcc-e-ehhHHH--------------------HHHHhC
Confidence 34566777643 67888854432222234689999999843322 1 011000 01222
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCC
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (463)
-.+++-+|.| |.|.|... .....+.+..++|+..+++.... ..++...+++|+|+|.||..+..+|.+ ..
T Consensus 87 Gy~V~~~D~r-GhG~S~~~--~~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~----~p-- 156 (330)
T PLN02298 87 GFACFALDLE-GHGRSEGL--RAYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLA----NP-- 156 (330)
T ss_pred CCEEEEecCC-CCCCCCCc--cccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhc----Cc--
Confidence 3789999999 99998532 22223555678888888875433 222334589999999999877655432 11
Q ss_pred CCCceeeeeeeeccCcCC
Q 012473 205 EKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 205 ~~~~inLkGi~iGNg~~d 222 (463)
-.++|+++.+++.+
T Consensus 157 ----~~v~~lvl~~~~~~ 170 (330)
T PLN02298 157 ----EGFDGAVLVAPMCK 170 (330)
T ss_pred ----ccceeEEEeccccc
Confidence 13899999988764
No 18
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.68 E-value=0.00012 Score=74.44 Aligned_cols=132 Identities=21% Similarity=0.231 Sum_probs=81.0
Q ss_pred EEEEEeec--cCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCccc
Q 012473 62 LFYYFVES--EGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGL 139 (463)
Q Consensus 62 lfy~f~es--~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~Gf 139 (463)
-.||++++ +.+|++|||||+++|| |.+.+.=|+.+.. ..+=+...+...||.+|-..-.
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~----------L~~i~~~l~~~SILvLDYsLt~-- 166 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIEF----------LLNIYKLLPEVSILVLDYSLTS-- 166 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHHH----------HHHHHHHcCCCeEEEEeccccc--
Confidence 35899984 3468889999999999 5555555655431 1111222223489999955332
Q ss_pred ccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccC
Q 012473 140 SYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (463)
Q Consensus 140 Sy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 219 (463)
| ......+.+-. .++.+..+...+.. ...++.|+|+|-||+-+-++.+++.+.++. ..+ |..++.+|
T Consensus 167 ~-~~~~~~yPtQL----~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~----~~P-k~~iLISP 233 (374)
T PF10340_consen 167 S-DEHGHKYPTQL----RQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKL----PYP-KSAILISP 233 (374)
T ss_pred c-ccCCCcCchHH----HHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCC----CCC-ceeEEECC
Confidence 0 00112222222 22333333333222 235799999999999999999998775431 122 78999999
Q ss_pred cCCccc
Q 012473 220 VTDEEI 225 (463)
Q Consensus 220 ~~dp~~ 225 (463)
|+++..
T Consensus 234 Wv~l~~ 239 (374)
T PF10340_consen 234 WVNLVP 239 (374)
T ss_pred CcCCcC
Confidence 999974
No 19
>PRK06489 hypothetical protein; Provisional
Probab=97.67 E-value=0.00044 Score=70.68 Aligned_cols=141 Identities=16% Similarity=0.009 Sum_probs=75.4
Q ss_pred CCceEEEEEEecCCCCeeEEEEEeecc---CCCCCCCEEEEeCCCCCcchHhh--HhhhcCCceecCCCCCCCCCeeEec
Q 012473 44 PSKHYSGYVTVDESHGRNLFYYFVESE---GNPSKDPVVLWLNGGPGCSSFDG--FIYEHGPFNFEAPTTKGSLPKLHVN 118 (463)
Q Consensus 44 ~~~~~sGy~~v~~~~~~~lfy~f~es~---~~~~~~Pl~lWlnGGPG~SS~~g--~f~E~GP~~~~~~~~~~~~~~l~~n 118 (463)
++...+|. .++ +..++|.-+-.. .+.++.|.||.++|++|.+..+- .+.+ ..+. ..
T Consensus 38 ~~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~---~l~~------------~~ 98 (360)
T PRK06489 38 DFTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAG---ELFG------------PG 98 (360)
T ss_pred ceeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHH---HhcC------------CC
Confidence 34555664 332 566777633210 01223688999999988765431 1110 0000 00
Q ss_pred CCCcccccceeeecCCCCcccccccCCCC----cccChHHHHHHHHHHHHHHHhhCcccCCCCE-EEEeecccccchHHH
Q 012473 119 PYSWTKVSSIIYLDSPAGVGLSYSENKTD----YVTGDLKTASDTHTFLLKWFELYPEFLANPF-FIAGESYAGIYVPTL 193 (463)
Q Consensus 119 ~~sW~~~anllfiDqP~G~GfSy~~~~~~----~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~-yi~GESYgG~yvP~l 193 (463)
..--.+..+++.+|.| |.|.|....... ...+-++.++++..++.. . +.-.++ +|.|+|.||..+-.+
T Consensus 99 ~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~---~---lgi~~~~~lvG~SmGG~vAl~~ 171 (360)
T PRK06489 99 QPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE---G---LGVKHLRLILGTSMGGMHAWMW 171 (360)
T ss_pred CcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH---h---cCCCceeEEEEECHHHHHHHHH
Confidence 0001244789999999 999985422110 012444555555554432 1 112345 489999999888777
Q ss_pred HHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 194 AYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 194 a~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
|.+-.+ .++++++.++.
T Consensus 172 A~~~P~----------~V~~LVLi~s~ 188 (360)
T PRK06489 172 GEKYPD----------FMDALMPMASQ 188 (360)
T ss_pred HHhCch----------hhheeeeeccC
Confidence 765322 26777766553
No 20
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.64 E-value=0.00013 Score=67.01 Aligned_cols=104 Identities=22% Similarity=0.177 Sum_probs=72.6
Q ss_pred EEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHHHHH
Q 012473 79 VLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASD 158 (463)
Q Consensus 79 ~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~ 158 (463)
||.++|.+|.+..+..+.+ .| .+..+++.+|.| |.|.|..... ....+-++.+++
T Consensus 1 vv~~hG~~~~~~~~~~~~~----------------~l-------~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~ 55 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE----------------AL-------ARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAED 55 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH----------------HH-------HTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHH----------------HH-------hCCCEEEEEecC-Cccccccccc-cCCcchhhhhhh
Confidence 6899999988866654442 11 134689999999 9999965432 112355666777
Q ss_pred HHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 159 ~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
+.++|+. .. ..+++|.|+|+||..+-.+|.+..+ .++|+++.++.....
T Consensus 56 l~~~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 56 LAELLDA----LG---IKKVILVGHSMGGMIALRLAARYPD----------RVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHHH----TT---TSSEEEEEETHHHHHHHHHHHHSGG----------GEEEEEEESESSSHH
T ss_pred hhhcccc----cc---ccccccccccccccccccccccccc----------ccccceeeccccccc
Confidence 7777754 22 2589999999999999888866321 489999998887654
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.59 E-value=0.00045 Score=67.57 Aligned_cols=117 Identities=17% Similarity=0.065 Sum_probs=76.5
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~G 138 (463)
+..++|+..+. . +..|.||+++|-++.+..+..+.+ .| .+..+++.+|.| |.|
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w~~~~~----------------~L-------~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELVFPFIE----------------AL-------DPDLEVIAFDVP-GVG 63 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHHHHHHH----------------Hh-------ccCceEEEECCC-CCC
Confidence 56788876432 2 234567899996666655533331 11 234699999998 999
Q ss_pred cccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeecc
Q 012473 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (463)
Q Consensus 139 fSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN 218 (463)
.|-... . ..+.+..++++.++|... .-.+++|.|+|+||..+-.+|.+-. -.++++++.|
T Consensus 64 ~S~~~~-~--~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p----------~~v~~lvl~~ 123 (276)
T TIGR02240 64 GSSTPR-H--PYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYP----------ERCKKLILAA 123 (276)
T ss_pred CCCCCC-C--cCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCH----------HHhhheEEec
Confidence 995321 1 234455667776666642 2357999999999998887776522 1389999998
Q ss_pred CcCC
Q 012473 219 GVTD 222 (463)
Q Consensus 219 g~~d 222 (463)
+...
T Consensus 124 ~~~~ 127 (276)
T TIGR02240 124 TAAG 127 (276)
T ss_pred cCCc
Confidence 8754
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.58 E-value=0.00078 Score=68.51 Aligned_cols=127 Identities=20% Similarity=0.207 Sum_probs=79.7
Q ss_pred CCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHh-hHhhhcCCceecCCCCCCCCCeeEecCCCccc-ccceeeecCCC
Q 012473 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK-VSSIIYLDSPA 135 (463)
Q Consensus 58 ~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiDqP~ 135 (463)
.|..+|+......+ .+.+|+||+++|..+.++.+ -.+. +. +.+ -.+++-+|.|
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~---~~--------------------l~~~g~~v~~~D~~- 124 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIA---RK--------------------IASSGYGVFAMDYP- 124 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHH---HH--------------------HHhCCCEEEEecCC-
Confidence 36778875544322 23468999999986554432 1111 11 111 2689999999
Q ss_pred CcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeee
Q 012473 136 GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYL 215 (463)
Q Consensus 136 G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~ 215 (463)
|.|.|.... .+..+-+..++++.++++.. ...+++...+++|.|+|+||..+..+|.+- . -.++|++
T Consensus 125 G~G~S~~~~--~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~---p-------~~v~glV 191 (349)
T PLN02385 125 GFGLSEGLH--GYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQ---P-------NAWDGAI 191 (349)
T ss_pred CCCCCCCCC--CCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhC---c-------chhhhee
Confidence 999986422 22235556678888777653 333445556899999999998776665431 1 1378999
Q ss_pred eccCcCC
Q 012473 216 VGNGVTD 222 (463)
Q Consensus 216 iGNg~~d 222 (463)
+.++...
T Consensus 192 Li~p~~~ 198 (349)
T PLN02385 192 LVAPMCK 198 (349)
T ss_pred Eeccccc
Confidence 8887643
No 23
>PLN02578 hydrolase
Probab=97.53 E-value=0.00095 Score=68.09 Aligned_cols=112 Identities=17% Similarity=0.190 Sum_probs=71.9
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~G 138 (463)
+.+++|.-. . +.|-||.++|-++.+..+.... | .| .+..+++-+|.| |.|
T Consensus 75 ~~~i~Y~~~--g----~g~~vvliHG~~~~~~~w~~~~---~-------------~l-------~~~~~v~~~D~~-G~G 124 (354)
T PLN02578 75 GHKIHYVVQ--G----EGLPIVLIHGFGASAFHWRYNI---P-------------EL-------AKKYKVYALDLL-GFG 124 (354)
T ss_pred CEEEEEEEc--C----CCCeEEEECCCCCCHHHHHHHH---H-------------HH-------hcCCEEEEECCC-CCC
Confidence 566776532 2 1244688998765544443222 1 11 234789999999 999
Q ss_pred cccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeecc
Q 012473 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (463)
Q Consensus 139 fSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN 218 (463)
.|.... . ..+....++++.+|++... ..+++|.|+|+||..+..+|.+-.+ .++++++.|
T Consensus 125 ~S~~~~-~--~~~~~~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~----------~v~~lvLv~ 184 (354)
T PLN02578 125 WSDKAL-I--EYDAMVWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGYPE----------LVAGVALLN 184 (354)
T ss_pred CCCCcc-c--ccCHHHHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhChH----------hcceEEEEC
Confidence 985432 1 2345556777777776532 3589999999999987777776322 378888877
Q ss_pred Cc
Q 012473 219 GV 220 (463)
Q Consensus 219 g~ 220 (463)
+.
T Consensus 185 ~~ 186 (354)
T PLN02578 185 SA 186 (354)
T ss_pred CC
Confidence 64
No 24
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.48 E-value=0.00082 Score=69.75 Aligned_cols=127 Identities=19% Similarity=0.089 Sum_probs=82.2
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~G 138 (463)
+..+|++.+.... .+.+|+||+++|.++.+..+-.+. +.. . .+-.+++-+|.| |.|
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~~~a---~~L-~------------------~~Gy~V~~~D~r-GhG 175 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFA---KQL-T------------------SCGFGVYAMDWI-GHG 175 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHHHHHHH---HHH-H------------------HCCCEEEEeCCC-CCC
Confidence 4577776665432 334689999999977655443222 111 1 112588999988 999
Q ss_pred cccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeecc
Q 012473 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (463)
Q Consensus 139 fSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN 218 (463)
.|-.. ..+..+.+..++++..+++..-..+| ..+++|+|+|.||..+..+|.+ .+ ..-.++|+++.+
T Consensus 176 ~S~~~--~~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~----p~----~~~~v~glVL~s 242 (395)
T PLN02652 176 GSDGL--HGYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASY----PS----IEDKLEGIVLTS 242 (395)
T ss_pred CCCCC--CCCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhc----cC----cccccceEEEEC
Confidence 88543 22334555667888888887666665 3489999999999877654421 11 012488999988
Q ss_pred CcCC
Q 012473 219 GVTD 222 (463)
Q Consensus 219 g~~d 222 (463)
|+++
T Consensus 243 P~l~ 246 (395)
T PLN02652 243 PALR 246 (395)
T ss_pred cccc
Confidence 8764
No 25
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.45 E-value=0.0012 Score=65.08 Aligned_cols=120 Identities=16% Similarity=0.134 Sum_probs=80.6
Q ss_pred EEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceee
Q 012473 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (463)
Q Consensus 51 y~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (463)
+++++ +..++|.-. . +.|.||+++|.|+.+..+-.+.+ .| .+...++-
T Consensus 11 ~~~~~---g~~i~y~~~--G----~g~~vvllHG~~~~~~~w~~~~~----------------~L-------~~~~~via 58 (295)
T PRK03592 11 RVEVL---GSRMAYIET--G----EGDPIVFLHGNPTSSYLWRNIIP----------------HL-------AGLGRCLA 58 (295)
T ss_pred EEEEC---CEEEEEEEe--C----CCCEEEEECCCCCCHHHHHHHHH----------------HH-------hhCCEEEE
Confidence 45554 566776532 1 24788999999988877744431 11 22348999
Q ss_pred ecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCcee
Q 012473 131 LDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN 210 (463)
Q Consensus 131 iDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in 210 (463)
+|.| |.|.|..... . .+....|+++..+|+.. ...+++|.|+|.||..+-.+|.+-. =.
T Consensus 59 ~D~~-G~G~S~~~~~-~--~~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~ 117 (295)
T PRK03592 59 PDLI-GMGASDKPDI-D--YTFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHP----------DR 117 (295)
T ss_pred EcCC-CCCCCCCCCC-C--CCHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhCh----------hh
Confidence 9988 9999964322 2 35556677777777642 2358999999999988877776532 12
Q ss_pred eeeeeeccCcCCc
Q 012473 211 FKGYLVGNGVTDE 223 (463)
Q Consensus 211 LkGi~iGNg~~dp 223 (463)
++++++.|+...+
T Consensus 118 v~~lil~~~~~~~ 130 (295)
T PRK03592 118 VRGIAFMEAIVRP 130 (295)
T ss_pred eeEEEEECCCCCC
Confidence 7999999985544
No 26
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.45 E-value=0.00062 Score=64.71 Aligned_cols=100 Identities=23% Similarity=0.240 Sum_probs=69.0
Q ss_pred CCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHH
Q 012473 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (463)
Q Consensus 76 ~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~ 155 (463)
.|.||+++|.||++..+-.+.+ . + +..+++.+|.| |.|.|.... ..+-++.
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~---~-------------l--------~~~~vi~~D~~-G~G~S~~~~----~~~~~~~ 52 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGE---A-------------L--------PDYPRLYIDLP-GHGGSAAIS----VDGFADV 52 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHH---H-------------c--------CCCCEEEecCC-CCCCCCCcc----ccCHHHH
Confidence 5889999999988876644431 1 1 13789999988 999985322 1255566
Q ss_pred HHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 156 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
++++.++|.. +...+++++|+|+||..+-.+|.+... -.++++++.++.
T Consensus 53 ~~~l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~---------~~v~~lvl~~~~ 101 (242)
T PRK11126 53 SRLLSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLA---------GGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCc---------ccccEEEEeCCC
Confidence 7777777753 234589999999999888888776311 016777776654
No 27
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.38 E-value=0.0017 Score=64.12 Aligned_cols=122 Identities=20% Similarity=0.195 Sum_probs=74.0
Q ss_pred eEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCccccc
Q 012473 47 HYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS 126 (463)
Q Consensus 47 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 126 (463)
..+.+++++ +..++|.- .. +.|.||.|+|.|..+..+-.+. |. +.+..
T Consensus 14 ~~~~~~~~~---~~~i~y~~---~G---~~~~iv~lHG~~~~~~~~~~~~---~~--------------------l~~~~ 61 (286)
T PRK03204 14 FESRWFDSS---RGRIHYID---EG---TGPPILLCHGNPTWSFLYRDII---VA--------------------LRDRF 61 (286)
T ss_pred ccceEEEcC---CcEEEEEE---CC---CCCEEEEECCCCccHHHHHHHH---HH--------------------HhCCc
Confidence 345678875 45566542 12 2477888999985554443332 11 12347
Q ss_pred ceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCC
Q 012473 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (463)
Q Consensus 127 nllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (463)
+++-+|.| |.|.|-... ....+.+..++++.++++. . ...+++|.|+|+||..+-.+|.. .
T Consensus 62 ~vi~~D~~-G~G~S~~~~--~~~~~~~~~~~~~~~~~~~----~---~~~~~~lvG~S~Gg~va~~~a~~----~----- 122 (286)
T PRK03204 62 RCVAPDYL-GFGLSERPS--GFGYQIDEHARVIGEFVDH----L---GLDRYLSMGQDWGGPISMAVAVE----R----- 122 (286)
T ss_pred EEEEECCC-CCCCCCCCC--ccccCHHHHHHHHHHHHHH----h---CCCCEEEEEECccHHHHHHHHHh----C-----
Confidence 89999988 999985322 1123444555666555543 2 23579999999999765444432 1
Q ss_pred CceeeeeeeeccCc
Q 012473 207 PVLNFKGYLVGNGV 220 (463)
Q Consensus 207 ~~inLkGi~iGNg~ 220 (463)
.-.++++++.++.
T Consensus 123 -p~~v~~lvl~~~~ 135 (286)
T PRK03204 123 -ADRVRGVVLGNTW 135 (286)
T ss_pred -hhheeEEEEECcc
Confidence 1248888887765
No 28
>PRK10749 lysophospholipase L2; Provisional
Probab=97.31 E-value=0.0018 Score=65.35 Aligned_cols=125 Identities=13% Similarity=0.011 Sum_probs=78.7
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~G 138 (463)
+..++|..+... ..+|+||.++|-.+.+..+.-+ .+.... +-.+++-+|.| |.|
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y~~~---~~~l~~-------------------~g~~v~~~D~~-G~G 93 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVKYAEL---AYDLFH-------------------LGYDVLIIDHR-GQG 93 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHHHHHH---HHHHHH-------------------CCCeEEEEcCC-CCC
Confidence 567888765432 3467899999975444333222 211111 12688999988 999
Q ss_pred cccccCCC---CcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeee
Q 012473 139 LSYSENKT---DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYL 215 (463)
Q Consensus 139 fSy~~~~~---~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~ 215 (463)
.|...... ....+-+..++++..+++.....++ ..++++.|+|.||..+-.+|.+- . -.++|++
T Consensus 94 ~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~---p-------~~v~~lv 160 (330)
T PRK10749 94 RSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRH---P-------GVFDAIA 160 (330)
T ss_pred CCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhC---C-------CCcceEE
Confidence 98532111 1112445667788888876554443 46899999999998776666541 1 1378999
Q ss_pred eccCcCC
Q 012473 216 VGNGVTD 222 (463)
Q Consensus 216 iGNg~~d 222 (463)
+.++...
T Consensus 161 l~~p~~~ 167 (330)
T PRK10749 161 LCAPMFG 167 (330)
T ss_pred EECchhc
Confidence 8887653
No 29
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.29 E-value=0.0017 Score=60.70 Aligned_cols=90 Identities=20% Similarity=0.149 Sum_probs=60.2
Q ss_pred CCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccCh
Q 012473 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGD 152 (463)
Q Consensus 73 ~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~ 152 (463)
++.+|++|.++|-++.+..+..+.+. + .+..+++.+|.| |.|.|..... ..+.
T Consensus 10 ~~~~~~li~~hg~~~~~~~~~~~~~~----------------l-------~~~~~v~~~d~~-G~G~s~~~~~---~~~~ 62 (251)
T TIGR02427 10 ADGAPVLVFINSLGTDLRMWDPVLPA----------------L-------TPDFRVLRYDKR-GHGLSDAPEG---PYSI 62 (251)
T ss_pred CCCCCeEEEEcCcccchhhHHHHHHH----------------h-------hcccEEEEecCC-CCCCCCCCCC---CCCH
Confidence 34679999998864444444333211 1 123689999998 9998843221 2355
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 153 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
++.++++.++++.+ ...+++|.|+|+||..+-.+|.+
T Consensus 63 ~~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 63 EDLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 66677777777642 23479999999999988888775
No 30
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.29 E-value=0.0025 Score=65.92 Aligned_cols=131 Identities=17% Similarity=0.067 Sum_probs=81.9
Q ss_pred CCceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcc
Q 012473 44 PSKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT 123 (463)
Q Consensus 44 ~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~ 123 (463)
+.++-+++.... .+..+||. +. .+...|.||.++|.|+.+..+-.+.+ .| .
T Consensus 101 ~~~~~~~~~~~~--~~~~~~y~--~~--G~~~~~~ivllHG~~~~~~~w~~~~~----------------~L-------~ 151 (383)
T PLN03084 101 GLKMGAQSQASS--DLFRWFCV--ES--GSNNNPPVLLIHGFPSQAYSYRKVLP----------------VL-------S 151 (383)
T ss_pred cccccceeEEcC--CceEEEEE--ec--CCCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------h
Confidence 345556665532 25556554 22 23346889999999887766543331 11 1
Q ss_pred cccceeeecCCCCcccccccCCC-CcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhcc
Q 012473 124 KVSSIIYLDSPAGVGLSYSENKT-DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGID 202 (463)
Q Consensus 124 ~~anllfiDqP~G~GfSy~~~~~-~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 202 (463)
+..+++-+|.| |.|.|...... ....+.++.++++.++|+.. ...+++|.|+|+||..+-.+|.+-.
T Consensus 152 ~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P---- 219 (383)
T PLN03084 152 KNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHP---- 219 (383)
T ss_pred cCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhCh----
Confidence 23689999988 99999653221 11235566777888777652 2347999999999965444443311
Q ss_pred CCCCCceeeeeeeeccCcC
Q 012473 203 AGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 203 ~~~~~~inLkGi~iGNg~~ 221 (463)
-.++++++.|+..
T Consensus 220 ------~~v~~lILi~~~~ 232 (383)
T PLN03084 220 ------DKIKKLILLNPPL 232 (383)
T ss_pred ------HhhcEEEEECCCC
Confidence 2388999988754
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.26 E-value=0.0014 Score=61.14 Aligned_cols=104 Identities=23% Similarity=0.260 Sum_probs=65.8
Q ss_pred CCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHH
Q 012473 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (463)
Q Consensus 76 ~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~ 155 (463)
+|.||.++|.+|.+..+-.+. + .|. +..+++-+|.| |.|.|..... ....+.++.
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~---~-------------~L~-------~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~ 55 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALI---E-------------LLG-------PHFRCLAIDLP-GHGSSQSPDE-IERYDFEEA 55 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHH---H-------------Hhc-------ccCeEEEEcCC-CCCCCCCCCc-cChhhHHHH
Confidence 478999999988776653332 1 111 23688999988 9998854211 111233444
Q ss_pred HHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 156 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
++++ +..+.+.. ...+++|.|+|+||..+..+|.+.. -.++++++.++.
T Consensus 56 ~~~~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~----------~~v~~lil~~~~ 104 (251)
T TIGR03695 56 AQDI---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYP----------ERVQGLILESGS 104 (251)
T ss_pred HHHH---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCc----------hheeeeEEecCC
Confidence 5552 22222333 2468999999999998888887632 237888887664
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.24 E-value=0.0029 Score=65.87 Aligned_cols=109 Identities=15% Similarity=0.160 Sum_probs=68.0
Q ss_pred CCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChH
Q 012473 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDL 153 (463)
Q Consensus 74 ~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~ 153 (463)
.+.|.||.|+|.++.+..+.... . .| .+..+++-+|.| |.|-|..... . ..+.+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~-------~---------~L-------~~~~~vi~~D~r-G~G~S~~~~~-~-~~~~~ 156 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNF-------D---------AL-------ASRFRVIAIDQL-GWGGSSRPDF-T-CKSTE 156 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHH-------H---------HH-------HhCCEEEEECCC-CCCCCCCCCc-c-cccHH
Confidence 45699999999977655542211 0 11 223689999988 9998843211 1 12223
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcC
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~ 221 (463)
+..+.+.+.+..|.+.. ...+++|.|+|+||..+-.+|.+- .-.++++++.++..
T Consensus 157 ~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~----------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 157 ETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH----------PEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC----------chhhcEEEEECCcc
Confidence 34444555666665533 234799999999998777766542 12378888877653
No 33
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.22 E-value=0.00052 Score=75.38 Aligned_cols=135 Identities=21% Similarity=0.270 Sum_probs=81.4
Q ss_pred EEecCCCCeeEEEEEeeccC-CCC-CCCEEEEeCCCCCcchHhh--HhhhcCCceecCCCCCCCCCeeEecCCCcccccc
Q 012473 52 VTVDESHGRNLFYYFVESEG-NPS-KDPVVLWLNGGPGCSSFDG--FIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS 127 (463)
Q Consensus 52 ~~v~~~~~~~lfy~f~es~~-~~~-~~Pl~lWlnGGPG~SS~~g--~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 127 (463)
+.+....|..+..|++...+ ++. +-|+|++++||| +++.+ ...|+=++ +.+-..
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~~~~~~~~q~~--------------------~~~G~~ 425 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVGYSFNPEIQVL--------------------ASAGYA 425 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccccccccchhhHHH--------------------hcCCeE
Confidence 33333347788888887543 333 359999999999 44443 22222222 233467
Q ss_pred eeeecCCCCcccccc--cCCC-CcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCC
Q 012473 128 IIYLDSPAGVGLSYS--ENKT-DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (463)
Q Consensus 128 llfiDqP~G~GfSy~--~~~~-~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (463)
||+++..--+||+.. .... .+.. ...+|+.+++. |+.+.|.....++.|+|.||||-..-.++..-
T Consensus 426 V~~~n~RGS~GyG~~F~~~~~~~~g~---~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~------- 494 (620)
T COG1506 426 VLAPNYRGSTGYGREFADAIRGDWGG---VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKT------- 494 (620)
T ss_pred EEEeCCCCCCccHHHHHHhhhhccCC---ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcC-------
Confidence 888885544565432 1110 1111 23567888888 88999988878899999999997655444331
Q ss_pred CCCceeeeeeeeccCcCCc
Q 012473 205 EKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 205 ~~~~inLkGi~iGNg~~dp 223 (463)
. -++..+...|.+|.
T Consensus 495 ---~-~f~a~~~~~~~~~~ 509 (620)
T COG1506 495 ---P-RFKAAVAVAGGVDW 509 (620)
T ss_pred ---c-hhheEEeccCcchh
Confidence 1 25666555555543
No 34
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.15 E-value=0.004 Score=63.72 Aligned_cols=104 Identities=19% Similarity=0.101 Sum_probs=67.6
Q ss_pred CCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHH
Q 012473 75 KDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLK 154 (463)
Q Consensus 75 ~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~ 154 (463)
+.|.||.|+|.++.+..+..+.+. | .+...++-+|.| |.|.|..... ...+.+.
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~----------------L-------~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~ 140 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGV----------------L-------AKNYTVYAIDLL-GFGASDKPPG--FSYTMET 140 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHH----------------H-------hcCCEEEEECCC-CCCCCCCCCC--ccccHHH
Confidence 347788999998887776444320 1 123689999999 9999854222 1235556
Q ss_pred HHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
.++++.++|+.. ...+++|.|+|+||..+-.+|..- .. =.++++++.|+.
T Consensus 141 ~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~--~P-------~rV~~LVLi~~~ 190 (360)
T PLN02679 141 WAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASES--TR-------DLVRGLVLLNCA 190 (360)
T ss_pred HHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHhc--Ch-------hhcCEEEEECCc
Confidence 677777777642 235899999999996654444321 11 127888888764
No 35
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.11 E-value=0.0018 Score=63.04 Aligned_cols=75 Identities=17% Similarity=0.126 Sum_probs=49.0
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
.+++-+|.| |.|.|...... .. .....++++.++++. +...++++.|+|+||..+-.+|.+-.+
T Consensus 61 ~~vi~~D~~-G~G~S~~~~~~-~~-~~~~~~~~l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~------ 124 (282)
T TIGR03343 61 YRVILKDSP-GFNKSDAVVMD-EQ-RGLVNARAVKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPD------ 124 (282)
T ss_pred CEEEEECCC-CCCCCCCCcCc-cc-ccchhHHHHHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChH------
Confidence 789999988 99999543111 11 111235556555543 234589999999999999998875322
Q ss_pred CCceeeeeeeeccCc
Q 012473 206 KPVLNFKGYLVGNGV 220 (463)
Q Consensus 206 ~~~inLkGi~iGNg~ 220 (463)
.++++++.++.
T Consensus 125 ----~v~~lvl~~~~ 135 (282)
T TIGR03343 125 ----RIGKLILMGPG 135 (282)
T ss_pred ----hhceEEEECCC
Confidence 15677766553
No 36
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.11 E-value=0.0031 Score=65.92 Aligned_cols=79 Identities=19% Similarity=0.127 Sum_probs=53.4
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
.++|-+|.| |+|.|.... ...+. ..+...+..|+...|.....++.|+|.|+||..++.+|..-.
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~~d~----~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p------- 287 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LTQDS----SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP------- 287 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---ccccH----HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC-------
Confidence 678999999 999985321 11111 112234445556677666678999999999999998886521
Q ss_pred CCceeeeeeeeccCcCC
Q 012473 206 KPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 206 ~~~inLkGi~iGNg~~d 222 (463)
-.++++++.+|.++
T Consensus 288 ---~ri~a~V~~~~~~~ 301 (414)
T PRK05077 288 ---PRLKAVACLGPVVH 301 (414)
T ss_pred ---cCceEEEEECCccc
Confidence 13788888777654
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=96.96 E-value=0.0048 Score=62.70 Aligned_cols=103 Identities=19% Similarity=0.094 Sum_probs=68.2
Q ss_pred CCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChH
Q 012473 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDL 153 (463)
Q Consensus 74 ~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~ 153 (463)
.+.|.||+++|.+|.+..+..+.+. |. +..+++-+|.| |.|.|-.... ..+.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~----------------l~-------~~~~v~~~d~~-g~G~s~~~~~---~~~~~ 181 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAA----------------LA-------AGRPVIALDLP-GHGASSKAVG---AGSLD 181 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHH----------------Hh-------cCCEEEEEcCC-CCCCCCCCCC---CCCHH
Confidence 4468899999998887776544421 11 12679999988 9998843211 23555
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
+.++++..+++. +...+++|.|+|+||..+..+|.+-. -.++++++.++.
T Consensus 182 ~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~----------~~v~~lv~~~~~ 231 (371)
T PRK14875 182 ELAAAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARAP----------QRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhCc----------hheeEEEEECcC
Confidence 666666666543 23357999999999999988876521 236777776554
No 38
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=96.91 E-value=0.0073 Score=64.15 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=79.4
Q ss_pred ceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhH-hhhcCCceecCCCCCCCCCeeEecCCCccc
Q 012473 46 KHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGF-IYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (463)
Q Consensus 46 ~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~-f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (463)
+...-|+..+ +..+||+....... ...|.||+++|.+|.+..+.. +. |. +.. .+.+
T Consensus 175 ~~~~~~~~~~---~~~l~~~~~gp~~~-~~k~~VVLlHG~~~s~~~W~~~~~---~~-------------L~~---~~~~ 231 (481)
T PLN03087 175 KFCTSWLSSS---NESLFVHVQQPKDN-KAKEDVLFIHGFISSSAFWTETLF---PN-------------FSD---AAKS 231 (481)
T ss_pred ceeeeeEeeC---CeEEEEEEecCCCC-CCCCeEEEECCCCccHHHHHHHHH---HH-------------HHH---HhhC
Confidence 3445666664 46788876543322 224778999999888876542 11 00 000 1234
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCC
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (463)
...++-+|.| |.|-|-..... ..+.++.++++. +.+.+.. ...+++|.|+|.||..+-.+|.+-.+
T Consensus 232 ~yrVia~Dl~-G~G~S~~p~~~--~ytl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe----- 297 (481)
T PLN03087 232 TYRLFAVDLL-GFGRSPKPADS--LYTLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPG----- 297 (481)
T ss_pred CCEEEEECCC-CCCCCcCCCCC--cCCHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChH-----
Confidence 4689999988 99988532111 124444455543 1233322 34589999999999988887775221
Q ss_pred CCCceeeeeeeeccC
Q 012473 205 EKPVLNFKGYLVGNG 219 (463)
Q Consensus 205 ~~~~inLkGi~iGNg 219 (463)
.++++++.++
T Consensus 298 -----~V~~LVLi~~ 307 (481)
T PLN03087 298 -----AVKSLTLLAP 307 (481)
T ss_pred -----hccEEEEECC
Confidence 2678888775
No 39
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.91 E-value=0.0045 Score=60.69 Aligned_cols=127 Identities=11% Similarity=0.042 Sum_probs=74.1
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchH-hhHhhhcCCceecCCCCCCCCCeeEecCCCcc-cccceeeecCCCC
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSF-DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT-KVSSIIYLDSPAG 136 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~-~~anllfiDqP~G 136 (463)
..++|.|+++.... ..+|+||.++|-.+-..- .-.+..... .+. .-.+++-+|.| |
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la~--------------------~La~~Gy~Vl~~Dl~-G 66 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQAR--------------------AFAAGGFGVLQIDLY-G 66 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHHH--------------------HHHHCCCEEEEECCC-C
Confidence 45577777765432 236899999985331100 011111111 011 22688999998 9
Q ss_pred cccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeee
Q 012473 137 VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLV 216 (463)
Q Consensus 137 ~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~i 216 (463)
.|.|...... .+.....+|+..+++ |++... ..+++|.|+|.||..+..+|.+.. -.++++++
T Consensus 67 ~G~S~g~~~~---~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p----------~~v~~lVL 129 (266)
T TIGR03101 67 CGDSAGDFAA---ARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLA----------AKCNRLVL 129 (266)
T ss_pred CCCCCCcccc---CCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCc----------cccceEEE
Confidence 9998643221 133334455554433 333322 358999999999999887775521 23788898
Q ss_pred ccCcCCcc
Q 012473 217 GNGVTDEE 224 (463)
Q Consensus 217 GNg~~dp~ 224 (463)
-++.++..
T Consensus 130 ~~P~~~g~ 137 (266)
T TIGR03101 130 WQPVVSGK 137 (266)
T ss_pred eccccchH
Confidence 88887754
No 40
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.85 E-value=0.0044 Score=59.60 Aligned_cols=95 Identities=15% Similarity=0.064 Sum_probs=63.4
Q ss_pred CEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHHH
Q 012473 77 PVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTA 156 (463)
Q Consensus 77 Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a 156 (463)
|.||.++|.++++..+-.+.+ . +.+..+++.+|.| |.|.|...+ . .+.++.+
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~----------------~-------L~~~~~vi~~Dl~-G~G~S~~~~--~--~~~~~~~ 65 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDE----------------E-------LSSHFTLHLVDLP-GFGRSRGFG--A--LSLADMA 65 (256)
T ss_pred CeEEEECCCCCChhHHHHHHH----------------H-------HhcCCEEEEecCC-CCCCCCCCC--C--CCHHHHH
Confidence 568999998887777644331 1 1345789999988 999995421 1 2444444
Q ss_pred HHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 157 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
+++.+ +...++++.|+|+||..+..+|.+-. -.++++++.|+.
T Consensus 66 ~~l~~-----------~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lili~~~ 108 (256)
T PRK10349 66 EAVLQ-----------QAPDKAIWLGWSLGGLVASQIALTHP----------ERVQALVTVASS 108 (256)
T ss_pred HHHHh-----------cCCCCeEEEEECHHHHHHHHHHHhCh----------HhhheEEEecCc
Confidence 44432 12357999999999998888876421 237888887763
No 41
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.83 E-value=0.021 Score=56.12 Aligned_cols=42 Identities=17% Similarity=0.034 Sum_probs=30.7
Q ss_pred cCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 173 FLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 173 ~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
....+++|+|+|.||.-+-.+|.+-. =.+++++..+|..++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p----------~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNP----------DRFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCc----------ccceEEEEECCccCcc
Confidence 34467999999999987777765521 1267888888888764
No 42
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.76 E-value=0.0046 Score=61.84 Aligned_cols=136 Identities=13% Similarity=0.202 Sum_probs=83.9
Q ss_pred CceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCccc
Q 012473 45 SKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (463)
Q Consensus 45 ~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (463)
.+..+-|+.+.. +... |.++-...+++++-++.++| =|++++ +|.- |=.+..+
T Consensus 63 v~~~~~~v~i~~--~~~i--w~~~~~~~~~~~~plVliHG-yGAg~g--~f~~--------------------Nf~~La~ 115 (365)
T KOG4409|consen 63 VPYSKKYVRIPN--GIEI--WTITVSNESANKTPLVLIHG-YGAGLG--LFFR--------------------NFDDLAK 115 (365)
T ss_pred CCcceeeeecCC--Ccee--EEEeecccccCCCcEEEEec-cchhHH--HHHH--------------------hhhhhhh
Confidence 344566777763 2222 33332223344555556776 466543 2321 2222344
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCC
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (463)
.-||-.||.| |-|.|-...- ..+-+.+-+.+.+-|++|..... -.+.+|.|||+||--...-|.+-.+.
T Consensus 116 ~~~vyaiDll-G~G~SSRP~F---~~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer---- 184 (365)
T KOG4409|consen 116 IRNVYAIDLL-GFGRSSRPKF---SIDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER---- 184 (365)
T ss_pred cCceEEeccc-CCCCCCCCCC---CCCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh----
Confidence 7889999988 9999965332 22333344578899999998765 34799999999997766665553332
Q ss_pred CCCceeeeeeeeccCcCCcc
Q 012473 205 EKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 205 ~~~~inLkGi~iGNg~~dp~ 224 (463)
++-++|.+||--|.
T Consensus 185 ------V~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 185 ------VEKLILVSPWGFPE 198 (365)
T ss_pred ------hceEEEeccccccc
Confidence 67788888886655
No 43
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.75 E-value=0.0064 Score=57.24 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 159 ~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
+.++++...+.++ ....+++|+|+|.||..+-.+|.+
T Consensus 79 ~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a~~ 115 (212)
T TIGR01840 79 LHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLGCT 115 (212)
T ss_pred HHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHHHh
Confidence 4444444334443 344579999999999876666654
No 44
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=96.74 E-value=0.0074 Score=59.27 Aligned_cols=106 Identities=18% Similarity=0.129 Sum_probs=67.3
Q ss_pred CCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChH
Q 012473 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDL 153 (463)
Q Consensus 74 ~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~ 153 (463)
.++|.||+++|..+.++.+..+.+ .|.. +-.+++-+|.| |.|-|...... ..+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~----------------~L~~------~g~~vi~~dl~-g~G~s~~~~~~--~~~~~ 70 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRC----------------LMEN------SGYKVTCIDLK-SAGIDQSDADS--VTTFD 70 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHH----------------HHHh------CCCEEEEeccc-CCCCCCCCccc--CCCHH
Confidence 567999999998776665533321 0110 12588999999 99977432211 13555
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
+.++++.++|+. ... ..+++|.|+||||..+-.++.+..+ .++++++.++.
T Consensus 71 ~~~~~l~~~i~~----l~~--~~~v~lvGhS~GG~v~~~~a~~~p~----------~v~~lv~~~~~ 121 (273)
T PLN02211 71 EYNKPLIDFLSS----LPE--NEKVILVGHSAGGLSVTQAIHRFPK----------KICLAVYVAAT 121 (273)
T ss_pred HHHHHHHHHHHh----cCC--CCCEEEEEECchHHHHHHHHHhChh----------heeEEEEeccc
Confidence 666666666653 221 3589999999999977777754321 26777776554
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=96.73 E-value=0.0043 Score=57.80 Aligned_cols=96 Identities=15% Similarity=0.108 Sum_probs=60.4
Q ss_pred CCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHH
Q 012473 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (463)
Q Consensus 76 ~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~ 155 (463)
.|.||.++|.++.+..+-.+.+ .+ .+..+++.+|.| |.|.|..... .+.++.
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~----------------~l-------~~~~~vi~~d~~-G~G~s~~~~~----~~~~~~ 55 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDE----------------EL-------SAHFTLHLVDLP-GHGRSRGFGP----LSLADA 55 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHH----------------hh-------ccCeEEEEecCC-cCccCCCCCC----cCHHHH
Confidence 4788999998665555433321 11 123689999988 9998854211 233344
Q ss_pred HHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 156 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
++++.+.+ ..++++.|+|+||..+..+|.+-.+ .++++++.++.
T Consensus 56 ~~~~~~~~-----------~~~~~lvG~S~Gg~~a~~~a~~~p~----------~v~~~il~~~~ 99 (245)
T TIGR01738 56 AEAIAAQA-----------PDPAIWLGWSLGGLVALHIAATHPD----------RVRALVTVASS 99 (245)
T ss_pred HHHHHHhC-----------CCCeEEEEEcHHHHHHHHHHHHCHH----------hhheeeEecCC
Confidence 44433221 2489999999999988877764221 26777776664
No 46
>PLN02965 Probable pheophorbidase
Probab=96.70 E-value=0.0054 Score=59.20 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=53.1
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
..++-+|.| |.|.|-..... ..+.++.|+++.++|.. .+ ...++++.|+|+||..+..+|.+..+
T Consensus 31 ~~via~Dl~-G~G~S~~~~~~--~~~~~~~a~dl~~~l~~----l~--~~~~~~lvGhSmGG~ia~~~a~~~p~------ 95 (255)
T PLN02965 31 FKSTCVDLT-GAGISLTDSNT--VSSSDQYNRPLFALLSD----LP--PDHKVILVGHSIGGGSVTEALCKFTD------ 95 (255)
T ss_pred ceEEEecCC-cCCCCCCCccc--cCCHHHHHHHHHHHHHh----cC--CCCCEEEEecCcchHHHHHHHHhCch------
Confidence 578999999 99999532221 23556677777777763 11 12489999999999988888875321
Q ss_pred CCceeeeeeeeccCc
Q 012473 206 KPVLNFKGYLVGNGV 220 (463)
Q Consensus 206 ~~~inLkGi~iGNg~ 220 (463)
.++++++.++.
T Consensus 96 ----~v~~lvl~~~~ 106 (255)
T PLN02965 96 ----KISMAIYVAAA 106 (255)
T ss_pred ----heeEEEEEccc
Confidence 26788887764
No 47
>PLN02442 S-formylglutathione hydrolase
Probab=96.58 E-value=0.01 Score=58.72 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
..+++...+..++.. ....+++|+|.|+||.-+-.+|.+- . =.+++++..+|..|+.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~----p------~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKN----P------DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhC----c------hhEEEEEEECCccCcc
Confidence 344555566655543 3445799999999998666655541 1 1268888899988864
No 48
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.55 E-value=0.045 Score=53.88 Aligned_cols=123 Identities=20% Similarity=0.158 Sum_probs=81.7
Q ss_pred CCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchH-h----hHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeec
Q 012473 58 HGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSF-D----GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLD 132 (463)
Q Consensus 58 ~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~-~----g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiD 132 (463)
.+..+|.-.......++-+-+|+.++|.=+-||. + ..|...| .-+--+|
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g--------------------------~~v~a~D 89 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSG--------------------------FAVYAID 89 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCC--------------------------CeEEEee
Confidence 3678887444444444667789999987555532 2 2222211 2355688
Q ss_pred CCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeee
Q 012473 133 SPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFK 212 (463)
Q Consensus 133 qP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLk 212 (463)
+. |.|.|-+ ...+..+-+.+++|...|+..+. ..++++..|.|++|||-||-.+-.++.+ +- --..
T Consensus 90 ~~-GhG~SdG--l~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~p--------~~w~ 155 (313)
T KOG1455|consen 90 YE-GHGRSDG--LHAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK--DP--------NFWD 155 (313)
T ss_pred cc-CCCcCCC--CcccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh--CC--------cccc
Confidence 88 9999964 45667788888888888887644 4567788899999999999776666655 11 1256
Q ss_pred eeeeccCc
Q 012473 213 GYLVGNGV 220 (463)
Q Consensus 213 Gi~iGNg~ 220 (463)
|+++..|.
T Consensus 156 G~ilvaPm 163 (313)
T KOG1455|consen 156 GAILVAPM 163 (313)
T ss_pred cceeeecc
Confidence 66665554
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=96.52 E-value=0.013 Score=63.14 Aligned_cols=100 Identities=18% Similarity=0.171 Sum_probs=66.0
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~G 138 (463)
+..++|+-+. +.+.|.||.++|.++.+..+..+.+. | .+..+++.+|.| |.|
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w~~~~~~----------------L-------~~~~~Vi~~D~~-G~G 63 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVWDGVAPL----------------L-------ADRFRVVAYDVR-GAG 63 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHHHHHHHH----------------h-------hcceEEEEecCC-CCC
Confidence 5667776432 23478999999998776665443311 1 123689999988 999
Q ss_pred cccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHH
Q 012473 139 LSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTL 193 (463)
Q Consensus 139 fSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~l 193 (463)
.|....... ..+.+..++++..+++.. .+ ..|++|+|+|+||..+-.+
T Consensus 64 ~S~~~~~~~-~~~~~~~a~dl~~~i~~l---~~---~~~~~lvGhS~Gg~~a~~~ 111 (582)
T PRK05855 64 RSSAPKRTA-AYTLARLADDFAAVIDAV---SP---DRPVHLLAHDWGSIQGWEA 111 (582)
T ss_pred CCCCCCccc-ccCHHHHHHHHHHHHHHh---CC---CCcEEEEecChHHHHHHHH
Confidence 997532211 235667788888888752 11 3479999999999554333
No 50
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=96.41 E-value=0.016 Score=58.75 Aligned_cols=76 Identities=16% Similarity=0.110 Sum_probs=51.3
Q ss_pred cccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccC
Q 012473 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 203 (463)
Q Consensus 124 ~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 203 (463)
+...++.+|.| |.|=|. . .. .+....|+++.++|+.. .. .+.+.|.|+|+||..+-.+|.+-.+
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~--~-~~--~~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG~vA~~~A~~~P~---- 161 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL--D-VP--IDTADQADAIALLLDAL-----GI-ARLHAFVGYSYGALVGLQFASRHPA---- 161 (343)
T ss_pred cccEEEEEeCC-CCCCCC--C-CC--CCHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHHHHHHHHHHHChH----
Confidence 45789999999 766552 1 11 23455688888877642 11 1245799999999988888876422
Q ss_pred CCCCceeeeeeeeccCcC
Q 012473 204 GEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 204 ~~~~~inLkGi~iGNg~~ 221 (463)
.++++++.++..
T Consensus 162 ------~V~~LvLi~s~~ 173 (343)
T PRK08775 162 ------RVRTLVVVSGAH 173 (343)
T ss_pred ------hhheEEEECccc
Confidence 278888887753
No 51
>PLN02511 hydrolase
Probab=96.39 E-value=0.035 Score=57.45 Aligned_cols=118 Identities=17% Similarity=0.162 Sum_probs=71.2
Q ss_pred EEEEEEecCCCCeeEEE-EEee-ccCCCCCCCEEEEeCCCCCcchH-h-hHhhhcCCceecCCCCCCCCCeeEecCCCcc
Q 012473 48 YSGYVTVDESHGRNLFY-YFVE-SEGNPSKDPVVLWLNGGPGCSSF-D-GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT 123 (463)
Q Consensus 48 ~sGy~~v~~~~~~~lfy-~f~e-s~~~~~~~Pl~lWlnGGPG~SS~-~-g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~ 123 (463)
.--.+...+ |..+.+ |+.. ....+.++|+||.|+|..|+|.. + -.+.. . + ..
T Consensus 72 ~re~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~---~-------------~------~~ 127 (388)
T PLN02511 72 RRECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL---R-------------A------RS 127 (388)
T ss_pred eEEEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH---H-------------H------HH
Confidence 344666654 455555 4332 12345678999999999998742 1 11110 0 0 01
Q ss_pred cccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 124 ~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
+-.+++-+|.| |.|-|-......+. ...++|+.++|+..-.++| ..++++.|+|.||..+-..+.+
T Consensus 128 ~g~~vv~~d~r-G~G~s~~~~~~~~~---~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 128 KGWRVVVFNSR-GCADSPVTTPQFYS---ASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred CCCEEEEEecC-CCCCCCCCCcCEEc---CCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 23578999988 88888543222111 1235566667766556666 4689999999999886655543
No 52
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=96.36 E-value=0.023 Score=69.09 Aligned_cols=107 Identities=20% Similarity=0.167 Sum_probs=70.9
Q ss_pred CCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCC-----CC
Q 012473 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENK-----TD 147 (463)
Q Consensus 73 ~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~-----~~ 147 (463)
.+..|.||+|+|.+|.+..+-.+.+ .+ .+..+++.+|.| |.|.|..... ..
T Consensus 1368 ~~~~~~vVllHG~~~s~~~w~~~~~----------------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~ 1423 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGEDWIPIMK----------------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTE 1423 (1655)
T ss_pred CCCCCeEEEECCCCCCHHHHHHHHH----------------HH-------hCCCEEEEEcCC-CCCCCCCcccccccccc
Confidence 4456899999999998876543331 11 123689999988 9998864321 01
Q ss_pred cccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 148 YVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 148 ~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
...+.+..++++.++++. +...+++|.|+|+||..+-.+|.+-.+ .++++++.++.
T Consensus 1424 ~~~si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~----------~V~~lVlis~~ 1479 (1655)
T PLN02980 1424 PTLSVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD----------KIEGAVIISGS 1479 (1655)
T ss_pred ccCCHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH----------hhCEEEEECCC
Confidence 123455667777777653 233589999999999988888765322 26777776653
No 53
>PRK10566 esterase; Provisional
Probab=96.30 E-value=0.024 Score=54.18 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=61.3
Q ss_pred EEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCccc-ccceeeecCCCCccccc
Q 012473 63 FYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK-VSSIIYLDSPAGVGLSY 141 (463)
Q Consensus 63 fy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~-~anllfiDqP~G~GfSy 141 (463)
++.+++........|+||.++|++|....+..+. . .+.+ -.+++.+|.| |.|-|+
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~---~--------------------~l~~~G~~v~~~d~~-g~G~~~ 69 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFA---V--------------------ALAQAGFRVIMPDAP-MHGARF 69 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHH---H--------------------HHHhCCCEEEEecCC-cccccC
Confidence 3444444333345799999999988765432221 0 0111 1578888988 777654
Q ss_pred ccCCCC-c---ccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 142 SENKTD-Y---VTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 142 ~~~~~~-~---~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
...... . ........+++..++ .++...+.....++.|+|+|+||..+..++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 70 SGDEARRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred CCccccchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 321111 0 000112334444443 33444444455689999999999999877654
No 54
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=96.27 E-value=0.034 Score=55.53 Aligned_cols=137 Identities=20% Similarity=0.197 Sum_probs=91.4
Q ss_pred eEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCccccc
Q 012473 47 HYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS 126 (463)
Q Consensus 47 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 126 (463)
...|+....+ +..++|+-++..+++. .+|++++|.=..+.-+-.+.+ . +.. .=.
T Consensus 9 ~~~~~~~~~d--~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry~~la~---~-l~~------------------~G~ 62 (298)
T COG2267 9 RTEGYFTGAD--GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRYEELAD---D-LAA------------------RGF 62 (298)
T ss_pred cccceeecCC--CceEEEEeecCCCCCC--cEEEEecCchHHHHHHHHHHH---H-HHh------------------CCC
Confidence 3445555443 6789998887665554 799999998544443322221 1 111 115
Q ss_pred ceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCC
Q 012473 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (463)
Q Consensus 127 nllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (463)
+++=+|.| |.|-|.. ...+...+-.+...++..|++..-..+| ..|+||+|+|-||-.+...+..-.
T Consensus 63 ~V~~~D~R-GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~-------- 129 (298)
T COG2267 63 DVYALDLR-GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP-------- 129 (298)
T ss_pred EEEEecCC-CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC--------
Confidence 78889999 9999973 2223333455666777777776655555 579999999999988777666532
Q ss_pred CceeeeeeeeccCcCCcc
Q 012473 207 PVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 207 ~~inLkGi~iGNg~~dp~ 224 (463)
-+++|+++-+|++...
T Consensus 130 --~~i~~~vLssP~~~l~ 145 (298)
T COG2267 130 --PRIDGLVLSSPALGLG 145 (298)
T ss_pred --ccccEEEEECccccCC
Confidence 3489999999998865
No 55
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=96.22 E-value=0.051 Score=54.97 Aligned_cols=93 Identities=20% Similarity=0.160 Sum_probs=62.4
Q ss_pred ccceeeecCCCCcccccccCC-CCcccChHHHHHHHHHHHHHHHh-------------------hCcccCCCCEEEEeec
Q 012473 125 VSSIIYLDSPAGVGLSYSENK-TDYVTGDLKTASDTHTFLLKWFE-------------------LYPEFLANPFFIAGES 184 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~-~~~~~~~~~~a~~~~~fl~~f~~-------------------~~p~~~~~~~yi~GES 184 (463)
-.+++-+|.| |.|-|.+... .....+-++.++|+..+++..-+ .+|. ..|+||.|+|
T Consensus 74 G~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~l~GhS 150 (332)
T TIGR01607 74 GYSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKEN--RLPMYIIGLS 150 (332)
T ss_pred CCcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccC--CCceeEeecc
Confidence 3789999988 9999975422 22223556778888888876543 2331 5699999999
Q ss_pred ccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCC
Q 012473 185 YAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 185 YgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~d 222 (463)
.||..+..++....+..... ....++|+++..|.+.
T Consensus 151 mGg~i~~~~~~~~~~~~~~~--~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 151 MGGNIALRLLELLGKSNENN--DKLNIKGCISLSGMIS 186 (332)
T ss_pred CccHHHHHHHHHhccccccc--cccccceEEEeccceE
Confidence 99998887776653321100 0245899988887764
No 56
>PRK10985 putative hydrolase; Provisional
Probab=96.18 E-value=0.036 Score=55.77 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=56.5
Q ss_pred EEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchH-hh-HhhhcCCceecCCCCCCCCCeeEecCCCccccccee
Q 012473 52 VTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSF-DG-FIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSII 129 (463)
Q Consensus 52 ~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g-~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 129 (463)
+...+ |..+.+++.+....+.++|+||.++|.+|++.. .. .+. ..... +-.+++
T Consensus 36 ~~~~d--g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~---~~l~~-------------------~G~~v~ 91 (324)
T PRK10985 36 LELPD--GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLL---EAAQK-------------------RGWLGV 91 (324)
T ss_pred EECCC--CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHH---HHHHH-------------------CCCEEE
Confidence 55544 444544333322334568999999999987532 11 111 00001 013455
Q ss_pred eecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 130 YLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 130 fiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
-+|.+ |.|=|-......+.... .+|+..+++..-+.+| ..+++++|+|.||..+-..+.+
T Consensus 92 ~~d~r-G~g~~~~~~~~~~~~~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~ 151 (324)
T PRK10985 92 VMHFR-GCSGEPNRLHRIYHSGE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAK 151 (324)
T ss_pred EEeCC-CCCCCccCCcceECCCc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHh
Confidence 56765 65533211111111122 2333333332223444 4589999999999876554443
No 57
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.13 E-value=0.045 Score=50.39 Aligned_cols=104 Identities=21% Similarity=0.185 Sum_probs=63.8
Q ss_pred CCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHH
Q 012473 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (463)
Q Consensus 76 ~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~ 155 (463)
.|.+++++|+|+++..+....+..+. ... + .+++.+|+| |.|.|. .. .......
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~----------------~~~---~-~~~~~~d~~-g~g~s~-~~----~~~~~~~ 74 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPA----------------LAA---R-YRVIAPDLR-GHGRSD-PA----GYSLSAY 74 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhc----------------ccc---c-eEEEEeccc-CCCCCC-cc----cccHHHH
Confidence 66999999999998876441111110 111 1 789999999 999996 11 1111122
Q ss_pred HHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCC
Q 012473 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 156 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~d 222 (463)
++++..+++ ... ..++.+.|+|+||..+-.++.+..+ .++++++.++...
T Consensus 75 ~~~~~~~~~----~~~---~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~ 124 (282)
T COG0596 75 ADDLAALLD----ALG---LEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHHH----HhC---CCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCC
Confidence 444444443 222 2349999999997777666665433 3677777666554
No 58
>PRK07581 hypothetical protein; Validated
Probab=96.02 E-value=0.039 Score=55.66 Aligned_cols=128 Identities=18% Similarity=0.101 Sum_probs=68.4
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVG 138 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~G 138 (463)
+..++|.-... ..+..+|+||.++|++|.+.........||- +. .+...+|-+|.| |.|
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~-------------l~------~~~~~vi~~D~~-G~G 83 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQDNEWLIGPGRA-------------LD------PEKYFIIIPNMF-GNG 83 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCcccchhhccCCCc-------------cC------cCceEEEEecCC-CCC
Confidence 45677654321 1345568888876665554443221111111 11 134789999999 999
Q ss_pred cccccCCC--CcccC---hHHHHHHHHHHHHHHHhhCcccCCCC-EEEEeecccccchHHHHHHHHhhccCCCCCceeee
Q 012473 139 LSYSENKT--DYVTG---DLKTASDTHTFLLKWFELYPEFLANP-FFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFK 212 (463)
Q Consensus 139 fSy~~~~~--~~~~~---~~~~a~~~~~fl~~f~~~~p~~~~~~-~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLk 212 (463)
.|-..... .+... ....++++........+. +.-.+ ..|.|.|+||..+-.+|.+-.+. ++
T Consensus 84 ~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a~~~P~~----------V~ 150 (339)
T PRK07581 84 LSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWAVRYPDM----------VE 150 (339)
T ss_pred CCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHHHHCHHH----------Hh
Confidence 98543211 11111 112344444322222221 22346 57899999999999998874432 56
Q ss_pred eeeeccCc
Q 012473 213 GYLVGNGV 220 (463)
Q Consensus 213 Gi~iGNg~ 220 (463)
++++.++.
T Consensus 151 ~Lvli~~~ 158 (339)
T PRK07581 151 RAAPIAGT 158 (339)
T ss_pred hheeeecC
Confidence 66666544
No 59
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.97 E-value=0.057 Score=54.66 Aligned_cols=147 Identities=16% Similarity=0.139 Sum_probs=86.0
Q ss_pred eEEEEEEecCCCCeeEEEEEeeccCC-C-CCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcc-
Q 012473 47 HYSGYVTVDESHGRNLFYYFVESEGN-P-SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT- 123 (463)
Q Consensus 47 ~~sGy~~v~~~~~~~lfy~f~es~~~-~-~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~- 123 (463)
..+.-+.+.+ ...++.+.|..... + ..+|++||++||=-|-+.-- .....+-.++.
T Consensus 61 v~~~dv~~~~--~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~-------------------~~~y~~~~~~~a 119 (336)
T KOG1515|consen 61 VTSKDVTIDP--FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSAN-------------------SPAYDSFCTRLA 119 (336)
T ss_pred ceeeeeEecC--CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCC-------------------CchhHHHHHHHH
Confidence 3344444443 56788888876543 3 58999999999955533100 00011111121
Q ss_pred cccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHH-HHhhCcccCCCCEEEEeecccccchHHHHHHHHhhcc
Q 012473 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLK-WFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGID 202 (463)
Q Consensus 124 ~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~-f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 202 (463)
+.++.+-| .++|=-+ ....+...-++.-+.+.-+++. |.+.+-..+ .++|+|.|-||..+-.+|.++.+..
T Consensus 120 ~~~~~vvv----SVdYRLA-PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~- 191 (336)
T KOG1515|consen 120 AELNCVVV----SVDYRLA-PEHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK- 191 (336)
T ss_pred HHcCeEEE----ecCcccC-CCCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc-
Confidence 33443332 2333322 1222222222333444555555 777666554 4999999999999999999998753
Q ss_pred CCCCCceeeeeeeeccCcCCccc
Q 012473 203 AGEKPVLNFKGYLVGNGVTDEEI 225 (463)
Q Consensus 203 ~~~~~~inLkGi~iGNg~~dp~~ 225 (463)
...+.|+|.++.-|+.....
T Consensus 192 ---~~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 192 ---LSKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred ---CCCcceEEEEEEecccCCCC
Confidence 12477999999988876543
No 60
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=95.91 E-value=0.014 Score=54.24 Aligned_cols=75 Identities=19% Similarity=0.172 Sum_probs=50.5
Q ss_pred ceeeecCCCCcccccc---cCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccC
Q 012473 127 SIIYLDSPAGVGLSYS---ENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA 203 (463)
Q Consensus 127 nllfiDqP~G~GfSy~---~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~ 203 (463)
+++-+|+| |.|+|.. ..... .+ .+++.+.+..+.++.+ ..++++.|+|+||..+-..|..-.+
T Consensus 2 ~vi~~d~r-G~g~S~~~~~~~~~~--~~----~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~---- 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPHWDPDFPD--YT----TDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE---- 67 (230)
T ss_dssp EEEEEECT-TSTTSSSCCGSGSCT--HC----HHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG----
T ss_pred EEEEEeCC-CCCCCCCCccCCccc--cc----HHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch----
Confidence 57889988 9999974 12221 22 3445555555555555 3459999999999888777765322
Q ss_pred CCCCceeeeeeeeccCcC
Q 012473 204 GEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 204 ~~~~~inLkGi~iGNg~~ 221 (463)
.++++++.++..
T Consensus 68 ------~v~~lvl~~~~~ 79 (230)
T PF00561_consen 68 ------RVKKLVLISPPP 79 (230)
T ss_dssp ------GEEEEEEESESS
T ss_pred ------hhcCcEEEeeec
Confidence 488888877764
No 61
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.67 E-value=0.15 Score=50.21 Aligned_cols=146 Identities=18% Similarity=0.225 Sum_probs=77.2
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccc-----eeeecC
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS-----IIYLDS 133 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~an-----llfiDq 133 (463)
+...-||++....-++..||||-|+|+=|.....-. -..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~------------------------~sg~d~lAd~~gFlV~yPdg 99 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLH------------------------GTGWDALADREGFLVAYPDG 99 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhc------------------------ccchhhhhcccCcEEECcCc
Confidence 566778888877778888999999998665544311 123333332 333321
Q ss_pred ------CCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCC
Q 012473 134 ------PAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKP 207 (463)
Q Consensus 134 ------P~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~ 207 (463)
|-+.|=++...+. ..+...+..+.+.+.....+|- .....+||+|-|-||..+-.++-.-.+
T Consensus 100 ~~~~wn~~~~~~~~~p~~~---~~g~ddVgflr~lva~l~~~~g-idp~RVyvtGlS~GG~Ma~~lac~~p~-------- 167 (312)
T COG3509 100 YDRAWNANGCGNWFGPADR---RRGVDDVGFLRALVAKLVNEYG-IDPARVYVTGLSNGGRMANRLACEYPD-------- 167 (312)
T ss_pred cccccCCCcccccCCcccc---cCCccHHHHHHHHHHHHHHhcC-cCcceEEEEeeCcHHHHHHHHHhcCcc--------
Confidence 2244444332111 1111223333344443334443 234579999999999988777765221
Q ss_pred ceeeeeeeeccCcC-Ccc-cccccchhhhhcCCCCCH
Q 012473 208 VLNFKGYLVGNGVT-DEE-IDGNALVPFVHGMGLISD 242 (463)
Q Consensus 208 ~inLkGi~iGNg~~-dp~-~~~~s~~~~~y~~gli~~ 242 (463)
-+.++++..|.. +.. -....-.+.+-.||..|.
T Consensus 168 --~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp 202 (312)
T COG3509 168 --IFAAIAPVAGLLALGVACTPPRPVSVMAFHGTADP 202 (312)
T ss_pred --cccceeeeecccCCCcccCCCCchhHHHhcCCCCC
Confidence 155666655555 222 222333444445555444
No 62
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.49 E-value=0.11 Score=50.95 Aligned_cols=78 Identities=21% Similarity=0.124 Sum_probs=52.7
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
.+++-+|.| |.|-|.... .+-....+++.++++.+-+..|.+ .++.++|+|.||..+-.+|.. .
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----~---- 121 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA----D---- 121 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----C----
Confidence 688999988 999885421 133345566777777655555543 359999999999765444321 1
Q ss_pred CCceeeeeeeeccCcCC
Q 012473 206 KPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 206 ~~~inLkGi~iGNg~~d 222 (463)
-.++|+++.|+++.
T Consensus 122 ---~~v~~lil~~p~~~ 135 (274)
T TIGR03100 122 ---LRVAGLVLLNPWVR 135 (274)
T ss_pred ---CCccEEEEECCccC
Confidence 13899999998854
No 63
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.47 E-value=0.036 Score=60.16 Aligned_cols=129 Identities=19% Similarity=0.171 Sum_probs=75.4
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcc-cccceeeecCCCCc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT-KVSSIIYLDSPAGV 137 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~-~~anllfiDqP~G~ 137 (463)
+..|+..++.... ....|+||.++|--..+...... +. . ...-|. +-..++-+|.+ |.
T Consensus 6 G~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~~~-~~-----~-------------~~~~l~~~Gy~vv~~D~R-G~ 64 (550)
T TIGR00976 6 GTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRWGL-DK-----T-------------EPAWFVAQGYAVVIQDTR-GR 64 (550)
T ss_pred CCEEEEEEEecCC-CCCCCEEEEecCCCCchhhcccc-cc-----c-------------cHHHHHhCCcEEEEEecc-cc
Confidence 6678776554332 34679999998653322110000 00 0 000111 23678999977 99
Q ss_pred ccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeec
Q 012473 138 GLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVG 217 (463)
Q Consensus 138 GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iG 217 (463)
|.|.+.... + + ...++|+.++|+ |+.+.| +...++.++|.||||...-.+|.. . .-.|++++..
T Consensus 65 g~S~g~~~~-~--~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~----~------~~~l~aiv~~ 128 (550)
T TIGR00976 65 GASEGEFDL-L--G-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVL----Q------PPALRAIAPQ 128 (550)
T ss_pred ccCCCceEe-c--C-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhcc----C------CCceeEEeec
Confidence 999753221 1 1 234566666665 555655 334589999999999765554432 1 1248999998
Q ss_pred cCcCCcc
Q 012473 218 NGVTDEE 224 (463)
Q Consensus 218 Ng~~dp~ 224 (463)
++..|..
T Consensus 129 ~~~~d~~ 135 (550)
T TIGR00976 129 EGVWDLY 135 (550)
T ss_pred Ccccchh
Confidence 8887744
No 64
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.20 E-value=0.035 Score=54.69 Aligned_cols=81 Identities=11% Similarity=0.044 Sum_probs=50.3
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCC
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (463)
..|++.||-+.+..-.|. ....+...+++++.++|+...+.. .....+++|+|+|.||+.+-.+|.+..+
T Consensus 66 ~~nVi~vD~~~~~~~~y~----~a~~~~~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----- 135 (275)
T cd00707 66 DYNVIVVDWGRGANPNYP----QAVNNTRVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----- 135 (275)
T ss_pred CCEEEEEECccccccChH----HHHHhHHHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC-----
Confidence 478999997643111111 001233455667777777655442 1234579999999999999888877532
Q ss_pred CCCceeeeeeeeccCc
Q 012473 205 EKPVLNFKGYLVGNGV 220 (463)
Q Consensus 205 ~~~~inLkGi~iGNg~ 220 (463)
+++.|+..+|.
T Consensus 136 -----~v~~iv~LDPa 146 (275)
T cd00707 136 -----KLGRITGLDPA 146 (275)
T ss_pred -----ccceeEEecCC
Confidence 36677766554
No 65
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.03 E-value=0.12 Score=50.50 Aligned_cols=108 Identities=22% Similarity=0.321 Sum_probs=71.4
Q ss_pred CCCCCEEEEeCCCCCcchH-hhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccC
Q 012473 73 PSKDPVVLWLNGGPGCSSF-DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTG 151 (463)
Q Consensus 73 ~~~~Pl~lWlnGGPG~SS~-~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~ 151 (463)
...-|+++.++|| |.|.+ +..|.. ++..+-. --+|-+|-- |.|=+...+..+ -+
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~----------------el~s~~~-----~r~~a~DlR-gHGeTk~~~e~d--lS 125 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFAS----------------ELKSKIR-----CRCLALDLR-GHGETKVENEDD--LS 125 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHH----------------HHHhhcc-----eeEEEeecc-ccCccccCChhh--cC
Confidence 3456999999998 77776 455541 1111100 112668854 999887766654 36
Q ss_pred hHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeecc
Q 012473 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN 218 (463)
Q Consensus 152 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN 218 (463)
.+..++|+...++.+|..-| -++.|.|||.||-.+...|..=. --+|-|+.+.+
T Consensus 126 ~eT~~KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~---------lpsl~Gl~viD 179 (343)
T KOG2564|consen 126 LETMSKDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKT---------LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhh---------chhhhceEEEE
Confidence 66789999999998885444 36999999999988755554311 12477877654
No 66
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=94.99 E-value=0.2 Score=51.61 Aligned_cols=127 Identities=17% Similarity=0.085 Sum_probs=73.4
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhH----------hhhc-CCceecCCCCCCCCCeeEecCCCcccccc
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGF----------IYEH-GPFNFEAPTTKGSLPKLHVNPYSWTKVSS 127 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~----------f~E~-GP~~~~~~~~~~~~~~l~~n~~sW~~~an 127 (463)
+.+++|.-+-. .++...|.||.++|-+|.+..+.. +..+ ||-. .+- .+...
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~-----------~l~------~~~~~ 93 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGK-----------PID------TDRYF 93 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCC-----------ccC------ccceE
Confidence 45677764321 123346999999999887764321 1111 1100 000 23468
Q ss_pred eeeecCCCCcccccccCC------CCc-----ccChHHHHHHHHHHHHHHHhhCcccCCCC-EEEEeecccccchHHHHH
Q 012473 128 IIYLDSPAGVGLSYSENK------TDY-----VTGDLKTASDTHTFLLKWFELYPEFLANP-FFIAGESYAGIYVPTLAY 195 (463)
Q Consensus 128 llfiDqP~G~GfSy~~~~------~~~-----~~~~~~~a~~~~~fl~~f~~~~p~~~~~~-~yi~GESYgG~yvP~la~ 195 (463)
||-+|.|-+.|.|..... ..+ ..+.+..++++.++|+. . .-.+ .+|.|+|+||..+-.+|.
T Consensus 94 vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----l---~~~~~~~lvG~S~Gg~ia~~~a~ 166 (379)
T PRK00175 94 VICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDA----L---GITRLAAVVGGSMGGMQALEWAI 166 (379)
T ss_pred EEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHH----h---CCCCceEEEEECHHHHHHHHHHH
Confidence 999998843455532111 000 23455666666666654 2 2245 589999999988888887
Q ss_pred HHHhhccCCCCCceeeeeeeeccCc
Q 012473 196 EVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 196 ~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
+-.+ .++++++.|+.
T Consensus 167 ~~p~----------~v~~lvl~~~~ 181 (379)
T PRK00175 167 DYPD----------RVRSALVIASS 181 (379)
T ss_pred hChH----------hhhEEEEECCC
Confidence 6322 37888888764
No 67
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=94.87 E-value=0.23 Score=49.56 Aligned_cols=140 Identities=21% Similarity=0.187 Sum_probs=91.8
Q ss_pred CceEEEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCccc
Q 012473 45 SKHYSGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTK 124 (463)
Q Consensus 45 ~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~ 124 (463)
....-+|+.++ + +.+++.|. .++..|+++.|+|=|=.+=.+=.-. ..|. ..
T Consensus 20 ~~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~----------------~~la------~~ 70 (322)
T KOG4178|consen 20 SAISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQI----------------PGLA------SR 70 (322)
T ss_pred hhcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchhhhhhh----------------hhhh------hc
Confidence 45567888875 3 77777765 6788999999999887653321100 0000 01
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCC
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (463)
-..++.+|.+ |.|+|...... ...+-...+.++..+|.. +.....++.|++||+..+=.+|..-.+..+
T Consensus 71 ~~rviA~Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~-- 139 (322)
T KOG4178|consen 71 GYRVIAPDLR-GYGFSDAPPHI-SEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVD-- 139 (322)
T ss_pred ceEEEecCCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcc--
Confidence 1568899988 99999764331 224555667777777753 224579999999999988888887665432
Q ss_pred CCCceeeeeeeeccCcCCccccc
Q 012473 205 EKPVLNFKGYLVGNGVTDEEIDG 227 (463)
Q Consensus 205 ~~~~inLkGi~iGNg~~dp~~~~ 227 (463)
..+++++... |+..+|....
T Consensus 140 --~lv~~nv~~~-~p~~~~~~~~ 159 (322)
T KOG4178|consen 140 --GLVTLNVPFP-NPKLKPLDSS 159 (322)
T ss_pred --eEEEecCCCC-Ccccchhhhh
Confidence 2355665555 7777776543
No 68
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=94.27 E-value=0.26 Score=46.29 Aligned_cols=76 Identities=18% Similarity=0.233 Sum_probs=55.6
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
.++..|+.| |-+ .......+-++.|+...+.|+ ...|+ .|++|+|.|+||..+=.+|.++.++.
T Consensus 28 ~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~I~---~~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G---- 91 (229)
T PF00975_consen 28 IGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEAIR---ARQPE---GPYVLAGWSFGGILAFEMARQLEEAG---- 91 (229)
T ss_dssp EEEEEECST-TSC-----TTSHEESSHHHHHHHHHHHHH---HHTSS---SSEEEEEETHHHHHHHHHHHHHHHTT----
T ss_pred EEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHHhh---hhCCC---CCeeehccCccHHHHHHHHHHHHHhh----
Confidence 567788877 555 112233577788888777776 35553 39999999999999999999998764
Q ss_pred CCceeeeeeeeccCc
Q 012473 206 KPVLNFKGYLVGNGV 220 (463)
Q Consensus 206 ~~~inLkGi~iGNg~ 220 (463)
.....+++.++.
T Consensus 92 ---~~v~~l~liD~~ 103 (229)
T PF00975_consen 92 ---EEVSRLILIDSP 103 (229)
T ss_dssp ----SESEEEEESCS
T ss_pred ---hccCceEEecCC
Confidence 447888888865
No 69
>PLN00021 chlorophyllase
Probab=94.20 E-value=0.63 Score=46.80 Aligned_cols=143 Identities=18% Similarity=0.078 Sum_probs=73.3
Q ss_pred CCceEEEEEEecCCCCeeE-EEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCc
Q 012473 44 PSKHYSGYVTVDESHGRNL-FYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSW 122 (463)
Q Consensus 44 ~~~~~sGy~~v~~~~~~~l-fy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW 122 (463)
++...-+-+...+.....+ ...+.++. ..+.|+|++++|+.+....+..+.+. +. +|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~p~~v~~P~~--~g~~PvVv~lHG~~~~~~~y~~l~~~----La----------------s~ 78 (313)
T PLN00021 21 KFPVELITVDESSRPSPPKPLLVATPSE--AGTYPVLLFLHGYLLYNSFYSQLLQH----IA----------------SH 78 (313)
T ss_pred CceeEEEEecCCCcCCCCceEEEEeCCC--CCCCCEEEEECCCCCCcccHHHHHHH----HH----------------hC
Confidence 4555555555432211212 22333332 35679999999997765544222211 00 00
Q ss_pred ccccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhh----CcccCCCCEEEEeecccccchHHHHHHHH
Q 012473 123 TKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFEL----YPEFLANPFFIAGESYAGIYVPTLAYEVM 198 (463)
Q Consensus 123 ~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~----~p~~~~~~~yi~GESYgG~yvP~la~~i~ 198 (463)
-..++.+|-+ | ++.... ..+.+.+.++..++..-++. ..+....+++|+|+|.||..+-.+|.+..
T Consensus 79 --G~~VvapD~~-g--~~~~~~-----~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 79 --GFIVVAPQLY-T--LAGPDG-----TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred --CCEEEEecCC-C--cCCCCc-----hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 1344555544 2 221110 12223344555555543321 12233457999999999998888886643
Q ss_pred hhccCCCCCceeeeeeeeccCcCCc
Q 012473 199 KGIDAGEKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 199 ~~n~~~~~~~inLkGi~iGNg~~dp 223 (463)
... ....+++++..+++...
T Consensus 149 ~~~-----~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 149 AVS-----LPLKFSALIGLDPVDGT 168 (313)
T ss_pred ccc-----cccceeeEEeecccccc
Confidence 221 12457888887776543
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.04 E-value=0.057 Score=50.51 Aligned_cols=90 Identities=17% Similarity=0.111 Sum_probs=58.0
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
..++.+|..-+.||+..-........-....+|+.++++...++. ......+.|+|.||||+-+-.++.+ ..
T Consensus 15 y~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~---~~---- 86 (213)
T PF00326_consen 15 YAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQ---HP---- 86 (213)
T ss_dssp -EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHH---TC----
T ss_pred EEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcc---cc----
Confidence 678899988778777532111111222345677777776554444 4556689999999999988877762 11
Q ss_pred CCceeeeeeeeccCcCCcccc
Q 012473 206 KPVLNFKGYLVGNGVTDEEID 226 (463)
Q Consensus 206 ~~~inLkGi~iGNg~~dp~~~ 226 (463)
-..+.++.++|.+|+...
T Consensus 87 ---~~f~a~v~~~g~~d~~~~ 104 (213)
T PF00326_consen 87 ---DRFKAAVAGAGVSDLFSY 104 (213)
T ss_dssp ---CGSSEEEEESE-SSTTCS
T ss_pred ---eeeeeeeccceecchhcc
Confidence 126889999999987654
No 71
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=93.78 E-value=0.16 Score=53.31 Aligned_cols=67 Identities=10% Similarity=0.014 Sum_probs=44.0
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
..|+|-+|-| |-|-|.-... ..+...+|+++.++|+...+.. .+.-.+++|.|+|.|||.+-.+|.+
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a---~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTS---AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred CCEEEEEECC-CcCCCCCccc---cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHh
Confidence 3799999988 4443321111 1233567777777776544333 2445689999999999988887764
No 72
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=93.68 E-value=0.15 Score=43.86 Aligned_cols=95 Identities=20% Similarity=0.207 Sum_probs=58.3
Q ss_pred EEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHHHH
Q 012473 78 VVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTAS 157 (463)
Q Consensus 78 l~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~ 157 (463)
+||+++|+.|.+..+..+.+ .+.. +-.+++.+|.| +.|-+.. ...++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~----~l~~------------------~G~~v~~~~~~-~~~~~~~----------~~~~~ 47 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAE----ALAE------------------QGYAVVAFDYP-GHGDSDG----------ADAVE 47 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHH----HHHH------------------TTEEEEEESCT-TSTTSHH----------SHHHH
T ss_pred CEEEECCCCCCHHHHHHHHH----HHHH------------------CCCEEEEEecC-CCCccch----------hHHHH
Confidence 58999999776655544433 1111 12567778877 6665411 11233
Q ss_pred HHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcC
Q 012473 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 158 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~ 221 (463)
++++.+. ...+ ..++++++|.|.||..+..++.+- -.++++++-+|+.
T Consensus 48 ~~~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-----------~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 48 RVLADIR---AGYP--DPDRIILIGHSMGGAIAANLAARN-----------PRVKAVVLLSPYP 95 (145)
T ss_dssp HHHHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-----------TTESEEEEESESS
T ss_pred HHHHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-----------cceeEEEEecCcc
Confidence 3333332 3233 457899999999999888877742 2378888888853
No 73
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=93.61 E-value=0.74 Score=47.55 Aligned_cols=109 Identities=23% Similarity=0.214 Sum_probs=71.9
Q ss_pred CCCCCEEEEeCCCCCcchH------hhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCC
Q 012473 73 PSKDPVVLWLNGGPGCSSF------DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKT 146 (463)
Q Consensus 73 ~~~~Pl~lWlnGGPG~SS~------~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~ 146 (463)
..++|+++.|.|=+|.|.. .....+.| +++- +.| +-|-|-|-.+++.
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~V-----------VfN---------------~RG~~g~~LtTpr 174 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRVV-----------VFN---------------HRGLGGSKLTTPR 174 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEEE-----------EEC---------------CCCCCCCccCCCc
Confidence 4678999999999999853 34455566 4422 222 4588888777665
Q ss_pred CcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcC
Q 012473 147 DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 147 ~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~ 221 (463)
-+.-...+ |+-++++.--++||+ .++|.+|.|+||.. +.+++-+..++. -=..|++|-|||-
T Consensus 175 ~f~ag~t~---Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~i---L~nYLGE~g~~~----~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 175 LFTAGWTE---DLREVVNHIKKRYPQ---APLFAVGFSMGGNI---LTNYLGEEGDNT----PLIAAVAVCNPWD 236 (409)
T ss_pred eeecCCHH---HHHHHHHHHHHhCCC---CceEEEEecchHHH---HHHHhhhccCCC----CceeEEEEeccch
Confidence 55444433 344444444478884 69999999999975 466666544321 1257889999983
No 74
>PRK10162 acetyl esterase; Provisional
Probab=93.58 E-value=0.31 Score=49.01 Aligned_cols=45 Identities=16% Similarity=0.037 Sum_probs=34.6
Q ss_pred CCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCc
Q 012473 175 ANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 175 ~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp 223 (463)
..++.|+|+|.||+-+..++.++.+... ....++++++..|++|.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 4579999999999999999987755321 12347889988888874
No 75
>PRK10115 protease 2; Provisional
Probab=93.42 E-value=0.26 Score=54.97 Aligned_cols=143 Identities=13% Similarity=0.058 Sum_probs=73.8
Q ss_pred EEEEecCCCCeeEEEEEeecc--CCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccc
Q 012473 50 GYVTVDESHGRNLFYYFVESE--GNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSS 127 (463)
Q Consensus 50 Gy~~v~~~~~~~lfy~f~es~--~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 127 (463)
-.+.+....|..+..|++-.. ......|+||+..||||.+...++..+.. +|...-=
T Consensus 417 e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~---------------------~l~~rG~ 475 (686)
T PRK10115 417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRL---------------------SLLDRGF 475 (686)
T ss_pred EEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHH---------------------HHHHCCc
Confidence 334443344667766554322 12345699999999999985433322221 1111111
Q ss_pred eeeecCCC-Ccccccc--cCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCC
Q 012473 128 IIYLDSPA-GVGLSYS--ENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAG 204 (463)
Q Consensus 128 llfiDqP~-G~GfSy~--~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~ 204 (463)
++.+=.+- |+||-.. .... .. .-...-+|+.+..+.. ...+--....+.|.|-||||--+-.++.. ..
T Consensus 476 ~v~~~n~RGs~g~G~~w~~~g~-~~-~k~~~~~D~~a~~~~L-v~~g~~d~~rl~i~G~S~GG~l~~~~~~~---~P--- 546 (686)
T PRK10115 476 VYAIVHVRGGGELGQQWYEDGK-FL-KKKNTFNDYLDACDAL-LKLGYGSPSLCYGMGGSAGGMLMGVAINQ---RP--- 546 (686)
T ss_pred EEEEEEcCCCCccCHHHHHhhh-hh-cCCCcHHHHHHHHHHH-HHcCCCChHHeEEEEECHHHHHHHHHHhc---Ch---
Confidence 11111122 3444321 1100 00 0012345566555433 33333345679999999999854433322 11
Q ss_pred CCCceeeeeeeeccCcCCcccc
Q 012473 205 EKPVLNFKGYLVGNGVTDEEID 226 (463)
Q Consensus 205 ~~~~inLkGi~iGNg~~dp~~~ 226 (463)
=.++.++.+.|++|....
T Consensus 547 ----dlf~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 547 ----ELFHGVIAQVPFVDVVTT 564 (686)
T ss_pred ----hheeEEEecCCchhHhhh
Confidence 128999999999998754
No 76
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=93.03 E-value=0.062 Score=55.53 Aligned_cols=79 Identities=20% Similarity=0.181 Sum_probs=51.0
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
.+||=||-| |+|+|.... +..+ .+.+++.+-.|+..-|+.....+-++|-|+||.|++.+|..= .
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~~D----~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le--~----- 283 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LTQD----SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE--D----- 283 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S-S-----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT--T-----
T ss_pred CEEEEEccC-CCcccccCC---CCcC----HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc--c-----
Confidence 578999999 999985322 1111 223556666777888998888999999999999999998641 1
Q ss_pred CCceeeeeeeeccCcCC
Q 012473 206 KPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 206 ~~~inLkGi~iGNg~~d 222 (463)
-.||+++.-.|.++
T Consensus 284 ---~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 284 ---PRLKAVVALGAPVH 297 (411)
T ss_dssp ---TT-SEEEEES---S
T ss_pred ---cceeeEeeeCchHh
Confidence 12788766555544
No 77
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=92.25 E-value=0.35 Score=45.51 Aligned_cols=130 Identities=17% Similarity=0.208 Sum_probs=82.1
Q ss_pred EEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeee
Q 012473 52 VTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYL 131 (463)
Q Consensus 52 ~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfi 131 (463)
|++.......+.=|.+.+++ ++|.+|.++|--|- +|.+. .+.. ... =+=.-||+-+
T Consensus 57 i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh~NAGN---mGhr~------~i~~--------~fy----~~l~mnv~iv 112 (300)
T KOG4391|consen 57 IELRTRDKVTLDAYLMLSES---SRPTLLYFHANAGN---MGHRL------PIAR--------VFY----VNLKMNVLIV 112 (300)
T ss_pred EEEEcCcceeEeeeeecccC---CCceEEEEccCCCc---ccchh------hHHH--------HHH----HHcCceEEEE
Confidence 44443335566655555443 78999999976552 22222 1100 000 0223678888
Q ss_pred cCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceee
Q 012473 132 DSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNF 211 (463)
Q Consensus 132 DqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inL 211 (463)
+-- |-|-|.+.....--.-|.++ . ..++..+|...+.++.++|.|-||--+-.+|.+-.. .+
T Consensus 113 sYR-GYG~S~GspsE~GL~lDs~a---v----ldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~----------ri 174 (300)
T KOG4391|consen 113 SYR-GYGKSEGSPSEEGLKLDSEA---V----LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD----------RI 174 (300)
T ss_pred Eee-ccccCCCCccccceeccHHH---H----HHHHhcCccCCcceEEEEecccCCeeEEEeeccchh----------he
Confidence 876 99999876543222233333 2 234467899988999999999999888887776432 48
Q ss_pred eeeeeccCcCCc
Q 012473 212 KGYLVGNGVTDE 223 (463)
Q Consensus 212 kGi~iGNg~~dp 223 (463)
.++++-|-+++-
T Consensus 175 ~~~ivENTF~SI 186 (300)
T KOG4391|consen 175 SAIIVENTFLSI 186 (300)
T ss_pred eeeeeechhccc
Confidence 899999988774
No 78
>PLN02872 triacylglycerol lipase
Probab=91.82 E-value=0.91 Score=47.18 Aligned_cols=123 Identities=15% Similarity=0.080 Sum_probs=69.7
Q ss_pred CCceEEEEEEecCCCCeeEEEEEeeccC---CCCCCCEEEEeCCCCCcchHhhHhhh-cCC-ceecCCCCCCCCCeeEec
Q 012473 44 PSKHYSGYVTVDESHGRNLFYYFVESEG---NPSKDPVVLWLNGGPGCSSFDGFIYE-HGP-FNFEAPTTKGSLPKLHVN 118 (463)
Q Consensus 44 ~~~~~sGy~~v~~~~~~~lfy~f~es~~---~~~~~Pl~lWlnGGPG~SS~~g~f~E-~GP-~~~~~~~~~~~~~~l~~n 118 (463)
.+..+.-+|+..| |-.|-.+-+...+ .+..+|.||.++|..++|..+..-.+ .+. +.+..
T Consensus 41 gy~~e~h~v~T~D--Gy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~------------- 105 (395)
T PLN02872 41 GYSCTEHTIQTKD--GYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD------------- 105 (395)
T ss_pred CCCceEEEEECCC--CcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh-------------
Confidence 4566777777765 4444444433221 22457899999999877776532110 110 11111
Q ss_pred CCCcccccceeeecCCCCcccccccCC-----CC-cccChHHHH-HHHHHHHHHHHhhCcccCCCCEEEEeecccccchH
Q 012473 119 PYSWTKVSSIIYLDSPAGVGLSYSENK-----TD-YVTGDLKTA-SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVP 191 (463)
Q Consensus 119 ~~sW~~~anllfiDqP~G~GfSy~~~~-----~~-~~~~~~~~a-~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP 191 (463)
+-.++.-.|.. |.|+|+.... .. +..+-++.| .|+-++++...+.. ..++++.|+|.||...-
T Consensus 106 -----~GydV~l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 106 -----HGFDVWVGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred -----CCCCccccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHHH
Confidence 11355556666 8888764211 11 123444566 67777777665432 35899999999996553
No 79
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=91.15 E-value=1.2 Score=43.74 Aligned_cols=118 Identities=12% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCC-----CCccc
Q 012473 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENK-----TDYVT 150 (463)
Q Consensus 76 ~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~-----~~~~~ 150 (463)
+++++|+-|=||....+--|.+ .|..+- +....++=+.. .|+|..... +.-..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~----------------~L~~~l---~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~ 59 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLS----------------ALYEKL---NPQFEILGISH---AGHSTSPSNSKFSPNGRLF 59 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHH----------------HHHHhC---CCCCeeEEecC---CCCcCCcccccccCCCCcc
Confidence 5799999999998887655442 111111 33344444442 355543332 22235
Q ss_pred ChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCc
Q 012473 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 151 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp 223 (463)
+.+++.++-.+||+++....+ ....+++|.|||=|...+-.+..++. ....+++++++-=|.+.-
T Consensus 60 sL~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~-------~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 60 SLQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP-------DLKFRVKKVILLFPTIED 124 (266)
T ss_pred CHHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc-------ccCCceeEEEEeCCcccc
Confidence 778888999999999887664 13568999999998766555555544 123556666655555443
No 80
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=90.86 E-value=2.2 Score=43.27 Aligned_cols=79 Identities=10% Similarity=0.016 Sum_probs=48.9
Q ss_pred ccceeeecCCCC--cccccccC--CCC-------cccChHHHHHHHHHHHHHHHhhCcccCCCC-EEEEeecccccchHH
Q 012473 125 VSSIIYLDSPAG--VGLSYSEN--KTD-------YVTGDLKTASDTHTFLLKWFELYPEFLANP-FFIAGESYAGIYVPT 192 (463)
Q Consensus 125 ~anllfiDqP~G--~GfSy~~~--~~~-------~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~-~yi~GESYgG~yvP~ 192 (463)
...||-+|.| | .|-|-..+ ..+ ...+.++.++++.++++. . .-.+ +.|+|+|.||..+-.
T Consensus 72 ~~~vi~~D~~-G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l---~~~~~~~l~G~S~Gg~ia~~ 143 (351)
T TIGR01392 72 RYFVVCSNVL-GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH----L---GIEQIAAVVGGSMGGMQALE 143 (351)
T ss_pred ceEEEEecCC-CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHH
Confidence 3689999988 7 45442111 000 113445566666666653 2 2234 999999999988887
Q ss_pred HHHHHHhhccCCCCCceeeeeeeeccCcC
Q 012473 193 LAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 193 la~~i~~~n~~~~~~~inLkGi~iGNg~~ 221 (463)
+|.+-. -.++++++.++..
T Consensus 144 ~a~~~p----------~~v~~lvl~~~~~ 162 (351)
T TIGR01392 144 WAIDYP----------ERVRAIVVLATSA 162 (351)
T ss_pred HHHHCh----------HhhheEEEEccCC
Confidence 776622 1278888877643
No 81
>PRK11460 putative hydrolase; Provisional
Probab=89.64 E-value=1.9 Score=41.19 Aligned_cols=38 Identities=13% Similarity=-0.005 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 158 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
.+.++++...++. .....+++|+|.|.||..+-.++.+
T Consensus 86 ~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 86 TFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHh
Confidence 3444444433332 3345679999999999998777654
No 82
>PRK11071 esterase YqiA; Provisional
Probab=89.64 E-value=1.4 Score=40.74 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=23.5
Q ss_pred HHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 162 FLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 162 fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
++..+.+... ..+++|.|.|.||.++-.+|.+
T Consensus 50 ~l~~l~~~~~---~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 50 LLESLVLEHG---GDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHcC---CCCeEEEEECHHHHHHHHHHHH
Confidence 4444444332 4589999999999999988876
No 83
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=89.12 E-value=0.98 Score=50.91 Aligned_cols=144 Identities=20% Similarity=0.176 Sum_probs=80.0
Q ss_pred EEEEEEecCCCCeeEEEEEeeccC--CCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccc
Q 012473 48 YSGYVTVDESHGRNLFYYFVESEG--NPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKV 125 (463)
Q Consensus 48 ~sGy~~v~~~~~~~lfy~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 125 (463)
..+-+.++ +..+++++....+ +.++-||+++..||||+-+..+.| .+..|++.+...
T Consensus 499 ~~~~i~~~---~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~------------------~~~~~~~~~s~~ 557 (755)
T KOG2100|consen 499 EFGKIEID---GITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKF------------------SVDWNEVVVSSR 557 (755)
T ss_pred eeEEEEec---cEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeE------------------EecHHHHhhccC
Confidence 44555552 4566676665432 334679999999999943332111 222334433333
Q ss_pred -cceeeecCCCCcccccccCCCCccc--ChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhcc
Q 012473 126 -SSIIYLDSPAGVGLSYSENKTDYVT--GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGID 202 (463)
Q Consensus 126 -anllfiDqP~G~GfSy~~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 202 (463)
+=++-|| +-|+|+.=..-...... .+ ...+|.....+.+.+.+ ..-...+.|+|.||||-.. ..++...+
T Consensus 558 g~~v~~vd-~RGs~~~G~~~~~~~~~~lG~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t----~~~l~~~~ 630 (755)
T KOG2100|consen 558 GFAVLQVD-GRGSGGYGWDFRSALPRNLGD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLT----LKLLESDP 630 (755)
T ss_pred CeEEEEEc-CCCcCCcchhHHHHhhhhcCC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHH----HHHhhhCc
Confidence 4467788 66887642110011111 11 12455666666666665 4444569999999999643 33333221
Q ss_pred CCCCCceeeeeeeeccCcCCcc
Q 012473 203 AGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 203 ~~~~~~inLkGi~iGNg~~dp~ 224 (463)
.--+|.-+.-+|.+|..
T Consensus 631 -----~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 631 -----GDVFKCGVAVAPVTDWL 647 (755)
T ss_pred -----CceEEEEEEecceeeee
Confidence 12356657788888877
No 84
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=87.95 E-value=2.7 Score=44.65 Aligned_cols=39 Identities=18% Similarity=0.101 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHH
Q 012473 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (463)
Q Consensus 156 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~ 195 (463)
....++++++-...|. -..+++.|+|||.||+-+-.++.
T Consensus 157 ~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 157 QRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhh
Confidence 3445566666666664 23468999999999976654443
No 85
>PLN02454 triacylglycerol lipase
Probab=87.85 E-value=1.5 Score=45.49 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCC
Q 012473 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 153 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~d 222 (463)
..+.+++...|++..+++|..+ ..++|+|||-||-.+-..|..|.+.... ...+++..+..|.|-+-
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCccc
Confidence 4567789999999999998754 3699999999999999999888764321 12345667777777654
No 86
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=86.94 E-value=2.8 Score=39.90 Aligned_cols=44 Identities=20% Similarity=0.229 Sum_probs=30.8
Q ss_pred HhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 167 FELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 167 ~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
+........+++|++|.|=||.....++..-.+ -+.++++..|.
T Consensus 88 v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd----------~faa~a~~sG~ 131 (220)
T PF10503_consen 88 VAARYNIDPSRVYVTGLSNGGMMANVLACAYPD----------LFAAVAVVSGV 131 (220)
T ss_pred HhhhcccCCCceeeEEECHHHHHHHHHHHhCCc----------cceEEEeeccc
Confidence 333445566789999999999888777765322 26677776665
No 87
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=86.70 E-value=4.4 Score=40.24 Aligned_cols=45 Identities=16% Similarity=0.053 Sum_probs=38.2
Q ss_pred CCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCccc
Q 012473 175 ANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (463)
Q Consensus 175 ~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~ 225 (463)
..++.|+|+|=||+-+..+|....+.. ...+++.++..|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 567999999999999999999987752 244789999999999876
No 88
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=85.78 E-value=2 Score=37.00 Aligned_cols=62 Identities=21% Similarity=0.221 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcC
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~ 221 (463)
...+.+.+.|++..+++| +..+.|+|||-||-.+..+|..+.+.... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccc
Confidence 345567777888778888 46799999999999999999999876532 135577777776654
No 89
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=84.05 E-value=2.2 Score=39.42 Aligned_cols=63 Identities=16% Similarity=0.038 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHhhC--cccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCc
Q 012473 155 TASDTHTFLLKWFELY--PEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~--p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp 223 (463)
..+|+.++++-..+.- -.+...+++|+|+|=||+.+..++..+.+... ..++++++..|++|.
T Consensus 48 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 48 ALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred cccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 3445555554333320 12345689999999999999999988877531 239999999999877
No 90
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.54 E-value=3.4 Score=36.44 Aligned_cols=44 Identities=16% Similarity=0.210 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
..++.+...+++....+| ..+++|+|+|-||..+-.+|..+.+.
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 344555666666666667 45899999999999999999998764
No 91
>PRK13604 luxD acyl transferase; Provisional
Probab=81.66 E-value=14 Score=37.09 Aligned_cols=123 Identities=15% Similarity=0.138 Sum_probs=67.8
Q ss_pred CeeEEEEEeecc-CCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCc
Q 012473 59 GRNLFYYFVESE-GNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGV 137 (463)
Q Consensus 59 ~~~lfy~f~es~-~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~ 137 (463)
+..|.=|+.+.+ +.+...|++|..+| .|+... .+...- .+=+.+=.++|-.|.--|.
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~--~~~~~A-------------------~~La~~G~~vLrfD~rg~~ 76 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIASG-FARRMD--HFAGLA-------------------EYLSSNGFHVIRYDSLHHV 76 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChH--HHHHHH-------------------HHHHHCCCEEEEecCCCCC
Confidence 677777776654 34566788887765 676532 111110 1111223677888865456
Q ss_pred ccccccCCCCcc-cChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeee
Q 012473 138 GLSYSENKTDYV-TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLV 216 (463)
Q Consensus 138 GfSy~~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~i 216 (463)
|=|-++-. ... +.....+....++++. .. ..+++|.|+|-||.-+...|.. .+++++++
T Consensus 77 GeS~G~~~-~~t~s~g~~Dl~aaid~lk~----~~---~~~I~LiG~SmGgava~~~A~~------------~~v~~lI~ 136 (307)
T PRK13604 77 GLSSGTID-EFTMSIGKNSLLTVVDWLNT----RG---INNLGLIAASLSARIAYEVINE------------IDLSFLIT 136 (307)
T ss_pred CCCCCccc-cCcccccHHHHHHHHHHHHh----cC---CCceEEEEECHHHHHHHHHhcC------------CCCCEEEE
Confidence 87744221 111 1112223333444443 21 3479999999999884333321 23788998
Q ss_pred ccCcCCc
Q 012473 217 GNGVTDE 223 (463)
Q Consensus 217 GNg~~dp 223 (463)
..|+.+.
T Consensus 137 ~sp~~~l 143 (307)
T PRK13604 137 AVGVVNL 143 (307)
T ss_pred cCCcccH
Confidence 8888773
No 92
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=81.15 E-value=2.6 Score=42.49 Aligned_cols=61 Identities=18% Similarity=0.176 Sum_probs=39.9
Q ss_pred cccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcc-cCCCCEEEEeecccccchHH
Q 012473 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPE-FLANPFFIAGESYAGIYVPT 192 (463)
Q Consensus 124 ~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~-~~~~~~yi~GESYgG~yvP~ 192 (463)
..+|++..--| |||+|.+... ..+..++++...++| ..+++ -+.+.+.+.|+|-||-....
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~~s---~~dLv~~~~a~v~yL----~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGPPS---RKDLVKDYQACVRYL----RDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEECCC-ccccCCCCCC---HHHHHHHHHHHHHHH----HhcccCCChheEEEeeccccHHHHHH
Confidence 34899999988 9999976432 123334444444444 33332 34578999999999976553
No 93
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=81.02 E-value=3.8 Score=38.77 Aligned_cols=60 Identities=18% Similarity=0.221 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcC
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~ 221 (463)
...+++...++...+++| ..+++++|||-||-.+..+|..+.+.. ...+++.+..|.|-+
T Consensus 109 ~~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~v 168 (229)
T cd00519 109 SLYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCC
Confidence 334455566666666666 457999999999999999998887653 124578888887765
No 94
>PLN02571 triacylglycerol lipase
Probab=80.78 E-value=5.1 Score=41.70 Aligned_cols=68 Identities=9% Similarity=0.050 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccC----CCCCceeeeeeeeccCcCC
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDA----GEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~----~~~~~inLkGi~iGNg~~d 222 (463)
.+.+++...|+.+.+++|.. ..+++|+|||-||-.+-..|..|....-. .....+++..+..|.|-+-
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 45677888899888888865 34799999999999999999888753211 0112345666777776654
No 95
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=79.32 E-value=8.1 Score=36.88 Aligned_cols=86 Identities=13% Similarity=0.120 Sum_probs=58.7
Q ss_pred ceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCC
Q 012473 127 SIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (463)
Q Consensus 127 nllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (463)
+...|+-|.+.+-=.+-....+..+..+.++.+.+.|+.+.. ..+++.|+|.|-|+.-+-..++++.+.....
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC--
Confidence 455677776543311111223345666778888888887665 4679999999999999998888888753211
Q ss_pred CceeeeeeeeccCc
Q 012473 207 PVLNFKGYLVGNGV 220 (463)
Q Consensus 207 ~~inLkGi~iGNg~ 220 (463)
.-+|+-+.+||+-
T Consensus 77 -~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 77 -PDDLSFVLIGNPR 89 (225)
T ss_pred -cCceEEEEecCCC
Confidence 1458899999885
No 96
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=79.14 E-value=2.6 Score=41.12 Aligned_cols=83 Identities=20% Similarity=0.199 Sum_probs=53.3
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
..+|.+|.- |+|-|.+.-... ..+.++|.++.| +|....| +.+-++-++|-||+|.....+|..-
T Consensus 58 Y~vV~~D~R-G~g~S~G~~~~~----~~~e~~D~~d~I-~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~-------- 122 (272)
T PF02129_consen 58 YAVVVQDVR-GTGGSEGEFDPM----SPNEAQDGYDTI-EWIAAQP-WSNGKVGMYGISYGGFTQWAAAARR-------- 122 (272)
T ss_dssp -EEEEEE-T-TSTTS-S-B-TT----SHHHHHHHHHHH-HHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT--------
T ss_pred CEEEEECCc-ccccCCCccccC----ChhHHHHHHHHH-HHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcC--------
Confidence 457888855 999998753321 334455555544 4666665 4444799999999999888887621
Q ss_pred CCceeeeeeeeccCcCCccc
Q 012473 206 KPVLNFKGYLVGNGVTDEEI 225 (463)
Q Consensus 206 ~~~inLkGi~iGNg~~dp~~ 225 (463)
.-.||.|+...+..|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 123999999888877654
No 97
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=78.87 E-value=6.5 Score=44.39 Aligned_cols=46 Identities=13% Similarity=-0.029 Sum_probs=32.2
Q ss_pred ChHHHHHHHHHHHHHHH------h---hCcccCCCCEEEEeecccccchHHHHHH
Q 012473 151 GDLKTASDTHTFLLKWF------E---LYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 151 ~~~~~a~~~~~fl~~f~------~---~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
+..+.+.|++......- . .+..+...++++.|||.||.....++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 55777777775554432 1 1233556799999999999999888854
No 98
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=78.50 E-value=3.9 Score=37.95 Aligned_cols=64 Identities=11% Similarity=0.106 Sum_probs=50.9
Q ss_pred cChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCC
Q 012473 150 TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 150 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~d 222 (463)
.+-+++|.|+.+.|+.+.++. ..+.+.|.|-|+|.-.+|.+..++....+ =.++++++-.+-..
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~~r------~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAALR------ARVAQVVLLSPSTT 108 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHHHH------hheeEEEEeccCCc
Confidence 466789999999999888754 46789999999999999999999977543 23777777665543
No 99
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=77.71 E-value=7.8 Score=39.17 Aligned_cols=66 Identities=17% Similarity=0.231 Sum_probs=42.5
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
--++=||-| |-|+|-..+.... .+ +.+....++.|+..+ ...+++|.|+||||..+-.+|....+.
T Consensus 87 ~~v~aiDl~-G~g~~s~~~~~~~-y~----~~~~v~~i~~~~~~~---~~~~~~lvghS~Gg~va~~~Aa~~P~~ 152 (326)
T KOG1454|consen 87 LRVLAIDLP-GHGYSSPLPRGPL-YT----LRELVELIRRFVKEV---FVEPVSLVGHSLGGIVALKAAAYYPET 152 (326)
T ss_pred eEEEEEecC-CCCcCCCCCCCCc-ee----hhHHHHHHHHHHHhh---cCcceEEEEeCcHHHHHHHHHHhCccc
Confidence 447889988 8885433222211 22 344455555555533 346799999999999999998885543
No 100
>COG4099 Predicted peptidase [General function prediction only]
Probab=77.56 E-value=21 Score=35.50 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHH
Q 012473 159 THTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVM 198 (463)
Q Consensus 159 ~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~ 198 (463)
..+.+.+-+..++....+++|++|-|-||.-.-+++.+..
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP 291 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP 291 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc
Confidence 3444554456677777889999999999987776666543
No 101
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=76.68 E-value=15 Score=38.32 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=24.7
Q ss_pred CCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcC
Q 012473 176 NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 176 ~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~ 221 (463)
....|+|.|+||--.-.+|.+=.+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd----------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE----------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc----------cccEEEEeccce
Confidence 358999999999888777765221 155666666543
No 102
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=76.08 E-value=4.6 Score=45.73 Aligned_cols=83 Identities=13% Similarity=0.174 Sum_probs=52.9
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhC--------------cccCCCCEEEEeecccccch
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELY--------------PEFLANPFFIAGESYAGIYV 190 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~--------------p~~~~~~~yi~GESYgG~yv 190 (463)
=.++|++|.. |+|-|.+.-.. ....+.+.+.+..+ |+... -.|.+-++-++|.||+|...
T Consensus 279 GYaVV~~D~R-Gtg~SeG~~~~-~~~~E~~D~~~vIe----Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 279 GFAVVYVSGI-GTRGSDGCPTT-GDYQEIESMKAVID----WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred CeEEEEEcCC-CCCCCCCcCcc-CCHHHHHHHHHHHH----HHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 4789999966 99999774321 11223333333444 55422 22445689999999999877
Q ss_pred HHHHHHHHhhccCCCCCceeeeeeeeccCcCCc
Q 012473 191 PTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 191 P~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp 223 (463)
-.+|..- .-.||.|+-..|+.|.
T Consensus 353 ~~aAa~~----------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 353 NAVATTG----------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHhhC----------CCcceEEEeeCCCCcH
Confidence 7666531 1238999988887764
No 103
>KOG3101 consensus Esterase D [General function prediction only]
Probab=75.70 E-value=29 Score=32.86 Aligned_cols=139 Identities=15% Similarity=0.145 Sum_probs=67.3
Q ss_pred EEEEee-ccCCCCCCCEEEEeCCCCCcchHhhHhh----------hcCCceecCCCCCCCCCeeEecCCCcccccceeee
Q 012473 63 FYYFVE-SEGNPSKDPVVLWLNGGPGCSSFDGFIY----------EHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYL 131 (463)
Q Consensus 63 fy~f~e-s~~~~~~~Pl~lWlnGGPG~SS~~g~f~----------E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfi 131 (463)
|=.|++ +....+.-|+++||.|= -|.- -+|. ++|=-.|..|... -+-.+.--+.||.
T Consensus 30 f~vylPp~a~~~k~~P~lf~LSGL-TCT~--~Nfi~Ksg~qq~As~hgl~vV~PDTSP-RG~~v~g~~eswD-------- 97 (283)
T KOG3101|consen 30 FGVYLPPDAPRGKRCPVLFYLSGL-TCTH--ENFIEKSGFQQQASKHGLAVVAPDTSP-RGVEVAGDDESWD-------- 97 (283)
T ss_pred EEEecCCCcccCCcCceEEEecCC-cccc--hhhHhhhhHHHhHhhcCeEEECCCCCC-CccccCCCccccc--------
Confidence 334444 22333446999999973 5542 2232 3454455543211 1122333455774
Q ss_pred cCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHh-hCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCcee
Q 012473 132 DSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFE-LYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN 210 (463)
Q Consensus 132 DqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~-~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in 210 (463)
==.|.|| |.+.+.......-+.-+.+.+-|-+-+. .+-.+...+.=|+|+|.|||=+-.++.+ | .-.
T Consensus 98 -FG~GAGF-YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lk----n------~~k 165 (283)
T KOG3101|consen 98 -FGQGAGF-YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLK----N------PSK 165 (283)
T ss_pred -ccCCcee-EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEc----C------ccc
Confidence 3457887 4443332222222223333333322222 2223334468999999999965544433 1 113
Q ss_pred eeeeeeccCcCCccc
Q 012473 211 FKGYLVGNGVTDEEI 225 (463)
Q Consensus 211 LkGi~iGNg~~dp~~ 225 (463)
.|.+---.|..+|..
T Consensus 166 ykSvSAFAPI~NP~~ 180 (283)
T KOG3101|consen 166 YKSVSAFAPICNPIN 180 (283)
T ss_pred ccceeccccccCccc
Confidence 555555556666653
No 104
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=75.68 E-value=6.9 Score=41.27 Aligned_cols=53 Identities=15% Similarity=0.172 Sum_probs=37.3
Q ss_pred CcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 136 GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 136 G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
|.||+.... ....+..+++.+.++..++..+ ..++.|.|||.||..+-.++..
T Consensus 130 g~gYDwR~~-----~~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 130 GFGYDFRQS-----NRLPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred cCCCCcccc-----ccHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 666664321 1223456778888888887765 4689999999999887766644
No 105
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=74.24 E-value=10 Score=35.43 Aligned_cols=60 Identities=15% Similarity=0.088 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCccc
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~ 225 (463)
++++.+.++|....+.. ...++++|.|-|=||...-.++.+-. -.+.|++.-+|++-+..
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p----------~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYP----------EPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTS----------STSSEEEEES---TTGC
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcC----------cCcCEEEEeeccccccc
Confidence 34455556666544432 45668999999999998888776521 24889999888875543
No 106
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=74.15 E-value=19 Score=43.07 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=66.1
Q ss_pred CCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHH
Q 012473 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (463)
Q Consensus 76 ~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~ 155 (463)
.|-++.++|+.|.+..+..+.+. + .....++-+|.| |.|-+. ....+.++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~----------------l-------~~~~~v~~~~~~-g~~~~~-----~~~~~l~~l 1118 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRY----------------L-------DPQWSIYGIQSP-RPDGPM-----QTATSLDEV 1118 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHh----------------c-------CCCCcEEEEECC-CCCCCC-----CCCCCHHHH
Confidence 35578889988877665444321 1 112566777877 665331 112466777
Q ss_pred HHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 156 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
|+++.+.++. ..| ..|+.+.|+|+||..+-.+|.++.+.. ..+..+++.+++
T Consensus 1119 a~~~~~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~-------~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1119 CEAHLATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG-------EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC-------CceeEEEEecCC
Confidence 8888777764 233 348999999999999999998886542 235555555543
No 107
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=73.39 E-value=5.3 Score=37.64 Aligned_cols=44 Identities=25% Similarity=0.393 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
+-.|+.++.+.|++.+++ .+||.|+|||=|+..+-.|-+...+.
T Consensus 76 ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~ 119 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAG 119 (207)
T ss_pred hHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcC
Confidence 345777888888888875 78999999999998887776665443
No 108
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=72.79 E-value=16 Score=37.82 Aligned_cols=28 Identities=11% Similarity=0.057 Sum_probs=23.8
Q ss_pred CceEEEEecCCccccCchhHHHHHHhcC
Q 012473 410 GYRALIFSGDHDMCVPFTGSEAWTRSVG 437 (463)
Q Consensus 410 girVLiY~Gd~D~icn~~Gte~wi~~L~ 437 (463)
..+|||..|+.|.++|..-.+...+.+.
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp 350 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQ 350 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 6899999999999999887777766663
No 109
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=72.58 E-value=7 Score=40.46 Aligned_cols=61 Identities=21% Similarity=0.273 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhhCcccCC-CCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 154 KTASDTHTFLLKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~-~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
-+|-|...+|..-...+|.+.. .|+.+.|.|||| |+..|+.+|.= -.+.||+=-+++.-|.
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP---------~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAP---------WLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCc---------cceeEEEecCccccch
Confidence 3588999999888889999985 799999999987 67777777631 2355665555555553
No 110
>PLN02753 triacylglycerol lipase
Probab=71.58 E-value=11 Score=40.24 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=49.5
Q ss_pred ChHHHHHHHHHHHHHHHhhCccc--CCCCEEEEeecccccchHHHHHHHHhhcc--CCCCCceeeeeeeeccCcCC
Q 012473 151 GDLKTASDTHTFLLKWFELYPEF--LANPFFIAGESYAGIYVPTLAYEVMKGID--AGEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 151 ~~~~~a~~~~~fl~~f~~~~p~~--~~~~~yi~GESYgG~yvP~la~~i~~~n~--~~~~~~inLkGi~iGNg~~d 222 (463)
+...+.+++...|+...+++|.- ....++|+|||-||-.+-..|..|.+... ......+++.-+..|.|-+-
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 33456788999999988888742 24579999999999999999998876321 11112345556666666554
No 111
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=71.10 E-value=12 Score=36.24 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=54.3
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
.|+.=.|-- |.|.|.++... .+.-...+..++.|++ .+. +..++.|.|.|-|..---.+|.+
T Consensus 89 ~nv~~~DYS-GyG~S~G~psE---~n~y~Di~avye~Lr~---~~g--~~~~Iil~G~SiGt~~tv~Lasr--------- 150 (258)
T KOG1552|consen 89 CNVVSYDYS-GYGRSSGKPSE---RNLYADIKAVYEWLRN---RYG--SPERIILYGQSIGTVPTVDLASR--------- 150 (258)
T ss_pred ceEEEEecc-cccccCCCccc---ccchhhHHHHHHHHHh---hcC--CCceEEEEEecCCchhhhhHhhc---------
Confidence 456666655 99999886553 3555556778888875 332 45789999999997653333332
Q ss_pred CCceeeeeeeeccCcCCccc
Q 012473 206 KPVLNFKGYLVGNGVTDEEI 225 (463)
Q Consensus 206 ~~~inLkGi~iGNg~~dp~~ 225 (463)
..+.|+++-+|+++-..
T Consensus 151 ---~~~~alVL~SPf~S~~r 167 (258)
T KOG1552|consen 151 ---YPLAAVVLHSPFTSGMR 167 (258)
T ss_pred ---CCcceEEEeccchhhhh
Confidence 12999999999988543
No 112
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=70.39 E-value=8 Score=37.06 Aligned_cols=68 Identities=9% Similarity=0.020 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 153 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
...+.+|.+||+...+..+ ..+++|.+||.|+.-+-.....+...... ....-+|..|++.+|-+|..
T Consensus 73 ~~s~~~l~~~L~~L~~~~~---~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 73 RFSGPALARFLRDLARAPG---IKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHHhccC---CceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHH
Confidence 3456667777766554423 46899999999999888877777665431 01123688999999988864
No 113
>PLN02719 triacylglycerol lipase
Probab=69.60 E-value=13 Score=39.69 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHhhCcccC--CCCEEEEeecccccchHHHHHHHHhhcc--CCCCCceeeeeeeeccCcCC
Q 012473 153 LKTASDTHTFLLKWFELYPEFL--ANPFFIAGESYAGIYVPTLAYEVMKGID--AGEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 153 ~~~a~~~~~fl~~f~~~~p~~~--~~~~yi~GESYgG~yvP~la~~i~~~n~--~~~~~~inLkGi~iGNg~~d 222 (463)
..+.+++...|++..+++|... ...+.|+|||-||-.+--.|..|.+..- ......+++.-+..|.|-+-
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 3566788899999888888642 3469999999999999999999876421 11111234555666665543
No 114
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=69.19 E-value=6.9 Score=36.25 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=31.6
Q ss_pred CCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCccccc
Q 012473 175 ANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEIDG 227 (463)
Q Consensus 175 ~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~~~ 227 (463)
...+.|.|-|-||.|+-.+|.+. +++. ++.||.+.|....
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHH
Confidence 34599999999999999998774 2455 7789999987543
No 115
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=68.95 E-value=46 Score=32.46 Aligned_cols=89 Identities=18% Similarity=0.240 Sum_probs=60.4
Q ss_pred CEEEEeCCCCCcchH-hhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCcccChHHH
Q 012473 77 PVVLWLNGGPGCSSF-DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKT 155 (463)
Q Consensus 77 Pl~lWlnGGPG~SS~-~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~ 155 (463)
|.+|+++++=|.-.. -.+..+++|- .=++-++.| |.|. . . ....+.++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~------------------------~~v~~l~a~-g~~~--~--~-~~~~~l~~~ 50 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL------------------------LPVYGLQAP-GYGA--G--E-QPFASLDDM 50 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC------------------------ceeeccccC-cccc--c--c-cccCCHHHH
Confidence 568889877665433 3455556653 223445656 4432 1 1 112467778
Q ss_pred HHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhc
Q 012473 156 ASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (463)
Q Consensus 156 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n 201 (463)
++...+.|+ +..|+ -|.+|.|.|+||.-+=.+|.++..+.
T Consensus 51 a~~yv~~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 51 AAAYVAAIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred HHHHHHHHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCC
Confidence 888787777 57785 49999999999999999999998765
No 116
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=67.36 E-value=28 Score=31.17 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=47.4
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGE 205 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~ 205 (463)
..++.+|.| |.|.+... ..+.+..++.....++. ..+ ..++.++|+|.||..+-.+|.++.+..
T Consensus 26 ~~v~~~~~~-g~~~~~~~-----~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~---- 89 (212)
T smart00824 26 RDVSALPLP-GFGPGEPL-----PASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARG---- 89 (212)
T ss_pred ccEEEecCC-CCCCCCCC-----CCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCC----
Confidence 567888877 66644221 12344445555555442 333 458999999999999999999887543
Q ss_pred CCceeeeeeeeccC
Q 012473 206 KPVLNFKGYLVGNG 219 (463)
Q Consensus 206 ~~~inLkGi~iGNg 219 (463)
...+++++.+.
T Consensus 90 ---~~~~~l~~~~~ 100 (212)
T smart00824 90 ---IPPAAVVLLDT 100 (212)
T ss_pred ---CCCcEEEEEcc
Confidence 12566655544
No 117
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=66.17 E-value=11 Score=36.43 Aligned_cols=103 Identities=17% Similarity=0.371 Sum_probs=54.1
Q ss_pred CCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCC---cc
Q 012473 73 PSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTD---YV 149 (463)
Q Consensus 73 ~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~---~~ 149 (463)
-.++|+++|+-|-||-+. +.+|+|==....- ..+ ..-|+-....| .+.|+ |-.++.+. -.
T Consensus 26 ~~~~~li~~IpGNPG~~g---FY~~F~~~L~~~l-----~~r--~~~wtIsh~~H---~~~P~----sl~~~~s~~~~ei 88 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLG---FYTEFARHLHLNL-----IDR--LPVWTISHAGH---ALMPA----SLREDHSHTNEEI 88 (301)
T ss_pred CCCceEEEEecCCCCchh---HHHHHHHHHHHhc-----ccc--cceeEEecccc---ccCCc----ccccccccccccc
Confidence 377899999999999654 4455443211100 000 11222222222 22331 11111111 11
Q ss_pred cChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhc
Q 012473 150 TGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (463)
Q Consensus 150 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n 201 (463)
-+.+++.++=.+|++++. | +++++||.|+|=|.- +..+|+..+
T Consensus 89 fsL~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGaY----m~Lqil~~~ 131 (301)
T KOG3975|consen 89 FSLQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGAY----MVLQILPSI 131 (301)
T ss_pred cchhhHHHHHHHHHHHhC---C--CCCEEEEEecchhHH----HHHHHhhhc
Confidence 355566777788888655 4 367899999998754 444555443
No 118
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=65.64 E-value=9.4 Score=39.97 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=52.0
Q ss_pred cceeeecCCCCcccccccCC-----CCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 126 SSIIYLDSPAGVGLSYSENK-----TDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~-----~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
|-||++|.- =-|-|..... -.+ -+.+|+-.|+..|++.+-.++....+.|+.++|-||||.-..-+-.+-.
T Consensus 60 a~~v~lEHR-yYG~S~P~~~~s~~nL~y-Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP-- 135 (434)
T PF05577_consen 60 ALVVALEHR-YYGKSQPFGDLSTENLRY-LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP-- 135 (434)
T ss_dssp EEEEEE--T-TSTTB-TTGGGGGSTTTC--SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T--
T ss_pred CcEEEeehh-hhcCCCCccccchhhHHh-cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC--
Confidence 556666644 4444442111 012 2667888999999999887776666779999999999976655544421
Q ss_pred ccCCCCCceeeeeeeeccCcCCcccccc
Q 012473 201 IDAGEKPVLNFKGYLVGNGVTDEEIDGN 228 (463)
Q Consensus 201 n~~~~~~~inLkGi~iGNg~~dp~~~~~ 228 (463)
.+ +.|.+--+|-+....+..
T Consensus 136 -------~~-~~ga~ASSapv~a~~df~ 155 (434)
T PF05577_consen 136 -------HL-FDGAWASSAPVQAKVDFW 155 (434)
T ss_dssp -------TT--SEEEEET--CCHCCTTT
T ss_pred -------Ce-eEEEEeccceeeeecccH
Confidence 11 556666666666554443
No 119
>PLN02324 triacylglycerol lipase
Probab=64.00 E-value=22 Score=37.12 Aligned_cols=47 Identities=17% Similarity=0.194 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 153 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
..+.+++...|++..+++|... ..+.|+|||-||--+-..|..|.+.
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~ 239 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYG 239 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHh
Confidence 4566778888898888888532 3699999999999999888888763
No 120
>PLN02761 lipase class 3 family protein
Probab=63.49 E-value=21 Score=38.19 Aligned_cols=70 Identities=9% Similarity=0.041 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHhhCccc-C--CCCEEEEeecccccchHHHHHHHHhhccC---CCCCceeeeeeeeccCcCC
Q 012473 153 LKTASDTHTFLLKWFELYPEF-L--ANPFFIAGESYAGIYVPTLAYEVMKGIDA---GEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 153 ~~~a~~~~~fl~~f~~~~p~~-~--~~~~yi~GESYgG~yvP~la~~i~~~n~~---~~~~~inLkGi~iGNg~~d 222 (463)
..+.+++...|+...+.+|.. + ...++|+|||-||-.+-..|..|...+.. .....+++.-+..|.|-+-
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 356678888999988888532 1 23599999999999999999888753211 0112345556666665543
No 121
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=62.70 E-value=13 Score=38.47 Aligned_cols=65 Identities=20% Similarity=0.401 Sum_probs=38.1
Q ss_pred cceeeec-------CCCCcccccccCCC-CcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHH
Q 012473 126 SSIIYLD-------SPAGVGLSYSENKT-DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTL 193 (463)
Q Consensus 126 anllfiD-------qP~G~GfSy~~~~~-~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~l 193 (463)
|-|||+| +|.|.- ||.+... ++- +.+|+=.|+...| .++++..-=...|+..+|-||||+-..-+
T Consensus 112 AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL-tseQALADfA~ll-~~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 112 ALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL-TSEQALADFAELL-TFLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred ceEEEeehhccccCCCCcch-hccChhhhccc-cHHHHHHHHHHHH-HHHhhccccccCcEEEecCchhhHHHHHH
Confidence 5677776 577776 5543221 233 3445544554444 44544433346699999999999654433
No 122
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=62.17 E-value=25 Score=38.54 Aligned_cols=119 Identities=24% Similarity=0.371 Sum_probs=62.6
Q ss_pred CCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCccccc----------ceeeecCCCCc---ccc
Q 012473 74 SKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVS----------SIIYLDSPAGV---GLS 140 (463)
Q Consensus 74 ~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~a----------nllfiDqP~G~---GfS 140 (463)
++-|++|.+-||||. .++.|.+.|.+.. =|++||.- |+ |.-
T Consensus 640 kkYptvl~VYGGP~V-------------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hRGlk 693 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGV-------------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHRGLK 693 (867)
T ss_pred CCCceEEEEcCCCce-------------------------EEeeccccceehhhhhhhhhcceEEEEEcCC-Cccccchh
Confidence 457999999999993 4777888887753 25889944 32 110
Q ss_pred cccCCCCcccChHHHHHHHHHHHHHHHhhCcccCC-CCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccC
Q 012473 141 YSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNG 219 (463)
Q Consensus 141 y~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~-~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg 219 (463)
+-..-. ......+ ++|=.+-||-.-++.. |.+ ..+-|-|.||||-.. ...+.+- ++| ++-.+-|.|
T Consensus 694 FE~~ik-~kmGqVE-~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLS----lm~L~~~-----P~I-frvAIAGap 760 (867)
T KOG2281|consen 694 FESHIK-KKMGQVE-VEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLS----LMGLAQY-----PNI-FRVAIAGAP 760 (867)
T ss_pred hHHHHh-hccCeee-ehhhHHHHHHHHHhcC-cccchheeEeccccccHHH----HHHhhcC-----cce-eeEEeccCc
Confidence 000000 0001111 1222333433333333 333 359999999999543 2222211 111 555666888
Q ss_pred cCCcccccccch
Q 012473 220 VTDEEIDGNALV 231 (463)
Q Consensus 220 ~~dp~~~~~s~~ 231 (463)
.++...--..|.
T Consensus 761 VT~W~~YDTgYT 772 (867)
T KOG2281|consen 761 VTDWRLYDTGYT 772 (867)
T ss_pred ceeeeeecccch
Confidence 888875443333
No 123
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=60.62 E-value=30 Score=27.03 Aligned_cols=78 Identities=23% Similarity=0.209 Sum_probs=47.3
Q ss_pred eeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCccc
Q 012473 60 RNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGL 139 (463)
Q Consensus 60 ~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~Gf 139 (463)
..||+..++..+. .+.+|+.++|- |..|. -+.+.....-. +-.+++-+|+. |.|.
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~-~eh~~--ry~~~a~~L~~-------------------~G~~V~~~D~r-GhG~ 56 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGF-GEHSG--RYAHLAEFLAE-------------------QGYAVFAYDHR-GHGR 56 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCc-HHHHH--HHHHHHHHHHh-------------------CCCEEEEECCC-cCCC
Confidence 4577755554332 57899999986 43332 34433332211 11567889988 9999
Q ss_pred ccccCCCCcccChHHHHHHHHHHHH
Q 012473 140 SYSENKTDYVTGDLKTASDTHTFLL 164 (463)
Q Consensus 140 Sy~~~~~~~~~~~~~~a~~~~~fl~ 164 (463)
|.+. .....+-++..+|+..|+|
T Consensus 57 S~g~--rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 57 SEGK--RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCCc--ccccCCHHHHHHHHHHHhC
Confidence 9753 2334566677788777764
No 124
>PF03283 PAE: Pectinacetylesterase
Probab=60.51 E-value=73 Score=32.72 Aligned_cols=153 Identities=16% Similarity=0.109 Sum_probs=75.5
Q ss_pred CeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhH----hhhcCCceecCCCCC-CC--CCeeEecCCCcccccceeee
Q 012473 59 GRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGF----IYEHGPFNFEAPTTK-GS--LPKLHVNPYSWTKVSSIIYL 131 (463)
Q Consensus 59 ~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~----f~E~GP~~~~~~~~~-~~--~~~l~~n~~sW~~~anllfi 131 (463)
|+.-.|++.+.. ....+-+||.|+||=-|.+..-- ..++|-..--.+... .+ ...-..||.=+ ..|+|||
T Consensus 34 GS~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~v 110 (361)
T PF03283_consen 34 GSPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFV 110 (361)
T ss_pred CCCCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEE
Confidence 444556665542 23446799999999788764322 223443221100000 00 01123455322 2677887
Q ss_pred cCCCCcccccccCCCCcccCh---HHH-HHHHHHHHHHHHhh-CcccCCCCEEEEeecccccchHHHHHHHHhhccCCCC
Q 012473 132 DSPAGVGLSYSENKTDYVTGD---LKT-ASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (463)
Q Consensus 132 DqP~G~GfSy~~~~~~~~~~~---~~~-a~~~~~fl~~f~~~-~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (463)
=-=.|.-|+= +........ --. ...+.++|...... +++ ...+.|+|.|-||.=+..-+.+|.+.-..
T Consensus 111 pYC~Gd~~~G--~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~--- 183 (361)
T PF03283_consen 111 PYCDGDSHSG--DVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS--- 183 (361)
T ss_pred EecCCccccC--cccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---
Confidence 4333433332 111111111 011 23334444444555 453 34799999999999888888888765321
Q ss_pred CceeeeeeeeccCcCC
Q 012473 207 PVLNFKGYLVGNGVTD 222 (463)
Q Consensus 207 ~~inLkGi~iGNg~~d 222 (463)
...++++.=..-++|
T Consensus 184 -~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 184 -SVKVKCLSDSGFFLD 198 (361)
T ss_pred -CceEEEecccccccc
Confidence 244555544433344
No 125
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=58.87 E-value=48 Score=33.37 Aligned_cols=147 Identities=12% Similarity=-0.004 Sum_probs=70.7
Q ss_pred EEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHh---hHhhhcCCceecCCCCCCCCCeeEecCCCcc-cccc
Q 012473 52 VTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFD---GFIYEHGPFNFEAPTTKGSLPKLHVNPYSWT-KVSS 127 (463)
Q Consensus 52 ~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~---g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~-~~an 127 (463)
|.+....+..++=|+...++.....|.||-++|..|.+... ..+...|=..+..+- ...- +..+
T Consensus 59 v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~------------rGqg~~~~d 126 (320)
T PF05448_consen 59 VSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDV------------RGQGGRSPD 126 (320)
T ss_dssp EEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--------------TTTSSSS-B
T ss_pred EEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeEEEEecC------------CCCCCCCCC
Confidence 33333336777767776654567789999999988775432 234555554443321 1111 1111
Q ss_pred eeeecCCCCcccccccCCCCcccC-hHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCC
Q 012473 128 IIYLDSPAGVGLSYSENKTDYVTG-DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEK 206 (463)
Q Consensus 128 llfiDqP~G~GfSy~~~~~~~~~~-~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~ 206 (463)
..-...+..-|+-.....+...+. -..+..|.+.++ .|+...|++....+.++|+|-||...-.+|.. ..
T Consensus 127 ~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aaL-d~------- 197 (320)
T PF05448_consen 127 YRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL-DP------- 197 (320)
T ss_dssp -SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH-SS-------
T ss_pred ccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHHh-Cc-------
Confidence 111111222333221000000000 011223333333 35677899988899999999999877666653 11
Q ss_pred CceeeeeeeeccCcCC
Q 012473 207 PVLNFKGYLVGNGVTD 222 (463)
Q Consensus 207 ~~inLkGi~iGNg~~d 222 (463)
.++.++...|++.
T Consensus 198 ---rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 198 ---RVKAAAADVPFLC 210 (320)
T ss_dssp ---T-SEEEEESESSS
T ss_pred ---cccEEEecCCCcc
Confidence 1677777766643
No 126
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=57.51 E-value=66 Score=34.22 Aligned_cols=34 Identities=18% Similarity=0.130 Sum_probs=24.0
Q ss_pred HHHHHHHHhhCcccCCCCEEEEeecccccchHHHH
Q 012473 160 HTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLA 194 (463)
Q Consensus 160 ~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la 194 (463)
++.+++..+.|.-= ..++=|+|||=|++-|-.+.
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~Ll 198 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILTLL 198 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHHhh
Confidence 45566666666643 34699999999998776654
No 127
>PRK14566 triosephosphate isomerase; Provisional
Probab=56.18 E-value=27 Score=34.16 Aligned_cols=60 Identities=22% Similarity=0.400 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
+.|.+++.||++++...-.-....+=|. |||---|.-+..|.... ++.|+.||..-+|+.
T Consensus 189 e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 189 EQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 4578899999999865421112233333 99999999999998654 489999999998875
No 128
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=55.94 E-value=2.2e+02 Score=28.36 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=61.6
Q ss_pred CCCCCCEEEEeCCCCCcchH----hhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCC
Q 012473 72 NPSKDPVVLWLNGGPGCSSF----DGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTD 147 (463)
Q Consensus 72 ~~~~~Pl~lWlnGGPG~SS~----~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~ 147 (463)
..+....|+=++|-||+--= --.|.|.|= -+|=|.-| |.|++-......
T Consensus 31 ~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~i--------------------------R~I~iN~P-Gf~~t~~~~~~~ 83 (297)
T PF06342_consen 31 SGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGI--------------------------RFIGINYP-GFGFTPGYPDQQ 83 (297)
T ss_pred CCCCceeEEEecCCCCCccchhhhhhHHHHcCe--------------------------EEEEeCCC-CCCCCCCCcccc
Confidence 34455689999999997521 112222221 23445557 888876543333
Q ss_pred cccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 148 YVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 148 ~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
++..+- ..|...+++.-. . +..+.+.|||-|+--+-.+|... .+.|+++.||.
T Consensus 84 --~~n~er----~~~~~~ll~~l~-i-~~~~i~~gHSrGcenal~la~~~------------~~~g~~lin~~ 136 (297)
T PF06342_consen 84 --YTNEER----QNFVNALLDELG-I-KGKLIFLGHSRGCENALQLAVTH------------PLHGLVLINPP 136 (297)
T ss_pred --cChHHH----HHHHHHHHHHcC-C-CCceEEEEeccchHHHHHHHhcC------------ccceEEEecCC
Confidence 333332 234444444332 2 25788999999998887777653 36799999887
No 129
>PRK04940 hypothetical protein; Provisional
Probab=55.73 E-value=27 Score=32.14 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=30.0
Q ss_pred CCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcccc
Q 012473 176 NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEID 226 (463)
Q Consensus 176 ~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~~ 226 (463)
.++.|.|-|-||.|+-.||.+- .++. +|.||.+.|...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~a-VLiNPAv~P~~~ 97 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQ-VIFNPNLFPEEN 97 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCE-EEECCCCChHHH
Confidence 4789999999999999999883 2444 456899998653
No 130
>PRK14567 triosephosphate isomerase; Provisional
Probab=54.67 E-value=32 Score=33.49 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
+.+.+.+.++++++..+-+-....+=|. |||---|.-+..|.+.. ++.|+.||.+.+++.
T Consensus 179 e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 179 EQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 5678899999999876422112233333 99999999999998653 489999999999875
No 131
>COG0400 Predicted esterase [General function prediction only]
Probab=54.33 E-value=51 Score=31.02 Aligned_cols=78 Identities=18% Similarity=0.110 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcccc---ccc
Q 012473 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEID---GNA 229 (463)
Q Consensus 153 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~~---~~s 229 (463)
...+..+.+||....+.+.- ..+++++.|-|=|+.++..+...-. -.++|+++-.|..-+..+ ...
T Consensus 77 ~~~~~~~~~~l~~~~~~~gi-~~~~ii~~GfSqGA~ial~~~l~~~----------~~~~~ail~~g~~~~~~~~~~~~~ 145 (207)
T COG0400 77 DLETEKLAEFLEELAEEYGI-DSSRIILIGFSQGANIALSLGLTLP----------GLFAGAILFSGMLPLEPELLPDLA 145 (207)
T ss_pred HHHHHHHHHHHHHHHHHhCC-ChhheEEEecChHHHHHHHHHHhCc----------hhhccchhcCCcCCCCCccccccC
Confidence 34466788888887777653 3568999999999998887776632 237777777777654432 123
Q ss_pred chhhhhcCCCCC
Q 012473 230 LVPFVHGMGLIS 241 (463)
Q Consensus 230 ~~~~~y~~gli~ 241 (463)
-.+.+..||--|
T Consensus 146 ~~pill~hG~~D 157 (207)
T COG0400 146 GTPILLSHGTED 157 (207)
T ss_pred CCeEEEeccCcC
Confidence 344455555433
No 132
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=53.74 E-value=1.8e+02 Score=29.50 Aligned_cols=129 Identities=18% Similarity=0.200 Sum_probs=69.3
Q ss_pred EEEEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcch------HhhHhhhcCCceecCCCCCCCCCeeEecCCCc
Q 012473 49 SGYVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSS------FDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSW 122 (463)
Q Consensus 49 sGy~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS------~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW 122 (463)
.--|...+ .+.-.+.|.-. ......|+++-++|==|.|. +...+.+-| |.
T Consensus 51 re~v~~pd-g~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg-~~-------------------- 106 (345)
T COG0429 51 RERLETPD-GGFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG-WL-------------------- 106 (345)
T ss_pred eEEEEcCC-CCEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC-Ce--------------------
Confidence 33444433 34556677532 12344699999999877763 223344444 32
Q ss_pred ccccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhcc
Q 012473 123 TKVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGID 202 (463)
Q Consensus 123 ~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~ 202 (463)
++-++- -|-|.+-.+.+.-+...+. +|+..||..-.+.+| .+++|.+|-|.||. .+|..+.+...
T Consensus 107 -----~Vv~~~-Rgcs~~~n~~p~~yh~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~ 171 (345)
T COG0429 107 -----VVVFHF-RGCSGEANTSPRLYHSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGD 171 (345)
T ss_pred -----EEEEec-ccccCCcccCcceecccch---hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhcc
Confidence 222221 1444443333333333333 334444444345677 58999999999995 46667665432
Q ss_pred CCCCCceeeeeeeeccCc
Q 012473 203 AGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 203 ~~~~~~inLkGi~iGNg~ 220 (463)
+. ....++++-+|+
T Consensus 172 ---d~-~~~aa~~vs~P~ 185 (345)
T COG0429 172 ---DL-PLDAAVAVSAPF 185 (345)
T ss_pred ---Cc-ccceeeeeeCHH
Confidence 12 225666666666
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=53.40 E-value=21 Score=33.68 Aligned_cols=73 Identities=12% Similarity=0.015 Sum_probs=51.1
Q ss_pred CcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeee
Q 012473 136 GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYL 215 (463)
Q Consensus 136 G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~ 215 (463)
-+||-+++.. ++.++...++..+++--++.+|.-+ .+-+.|+|-|.|-+..+..++.. -.+.|++
T Consensus 102 svgY~l~~q~----htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~---------prI~gl~ 166 (270)
T KOG4627|consen 102 SVGYNLCPQV----HTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS---------PRIWGLI 166 (270)
T ss_pred EeccCcCccc----ccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC---------chHHHHH
Confidence 4666666443 4667777888888887778887533 49999999999987777777432 2267777
Q ss_pred eccCcCCc
Q 012473 216 VGNGVTDE 223 (463)
Q Consensus 216 iGNg~~dp 223 (463)
+-.|+-+-
T Consensus 167 l~~GvY~l 174 (270)
T KOG4627|consen 167 LLCGVYDL 174 (270)
T ss_pred HHhhHhhH
Confidence 77776554
No 134
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=52.38 E-value=20 Score=34.18 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 158 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
.-.++++...+.+++ +++|+|||=||.-+-+.|..+.+.
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~ 108 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDE 108 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHH
Confidence 344666666666764 699999999999999888886554
No 135
>PLN02408 phospholipase A1
Probab=51.77 E-value=23 Score=36.30 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
.+.+++.+.|++..+.+|.. ...++|+|||-||-.+-..|..|.+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 45677888888888888864 23699999999999999988888753
No 136
>PLN00413 triacylglycerol lipase
Probab=51.13 E-value=18 Score=38.25 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHh
Q 012473 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (463)
Q Consensus 158 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (463)
++...|++.++.+|. .+++|+|||-||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHHh
Confidence 566777888888884 479999999999999888877653
No 137
>PLN02310 triacylglycerol lipase
Probab=50.58 E-value=35 Score=35.53 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHhhCccc-CCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCC
Q 012473 154 KTASDTHTFLLKWFELYPEF-LANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~-~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~d 222 (463)
.+.+++.+.+++..+.+++- ....+.|+|||-||-.+-..|..|.... +.+++.-+..|.|-+-
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVG 250 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCcc
Confidence 34566777777777666531 2346999999999999888887775432 1244555566665543
No 138
>PLN02802 triacylglycerol lipase
Probab=50.56 E-value=36 Score=36.43 Aligned_cols=46 Identities=13% Similarity=0.081 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 154 KTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
.+.+++.+-++.+.+++|.- ...++|+|||-||-.+-..|..|.+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~ 354 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATC 354 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHh
Confidence 45567888888888887743 23699999999999999998888654
No 139
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=50.29 E-value=4.2 Score=41.25 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=44.6
Q ss_pred ccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHh
Q 012473 125 VSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (463)
Q Consensus 125 ~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (463)
..|||.||=-.+..-.|.. ...+...+++.+.+||+...... .+...+++|.|+|.|+|.+-.+++++..
T Consensus 104 d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 5799999944333222221 11344566777777777666332 2234579999999999999999999876
No 140
>PLN02847 triacylglycerol lipase
Probab=49.79 E-value=34 Score=37.36 Aligned_cols=62 Identities=21% Similarity=0.239 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeecc-CcCCcc
Q 012473 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGN-GVTDEE 224 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGN-g~~dp~ 224 (463)
..+.+...|++-+..+|.| ++.|+|||.||--+..++..+.+... .-++..++.|- |+++..
T Consensus 233 I~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 233 IAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecCchhcCHH
Confidence 3344445556666678864 69999999999988888776643221 23466666664 344443
No 141
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=47.17 E-value=22 Score=35.05 Aligned_cols=39 Identities=15% Similarity=0.132 Sum_probs=30.0
Q ss_pred hHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccch
Q 012473 152 DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYV 190 (463)
Q Consensus 152 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yv 190 (463)
-.+++..|.+.+.......|+=..-++|+.|||-|..=.
T Consensus 85 a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~ 123 (289)
T PF10081_consen 85 AREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGG 123 (289)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccch
Confidence 356788899999888888887654469999999876433
No 142
>PLN02934 triacylglycerol lipase
Probab=46.62 E-value=30 Score=36.98 Aligned_cols=41 Identities=12% Similarity=0.139 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhh
Q 012473 157 SDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 157 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
.++...|+++.+++|. .+++++|||-||-.+-..|..|...
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l~ 345 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVLQ 345 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHHh
Confidence 3577788888888885 4799999999999988888776543
No 143
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=44.09 E-value=39 Score=30.99 Aligned_cols=65 Identities=18% Similarity=0.091 Sum_probs=40.1
Q ss_pred cccceeeecCCCC--cccccccCCCCcccChHHHHHHHHHHHHHHHhhC-cccCCCCEEEEeecccccchHHHHHH
Q 012473 124 KVSSIIYLDSPAG--VGLSYSENKTDYVTGDLKTASDTHTFLLKWFELY-PEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 124 ~~anllfiDqP~G--~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~-p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
+.|-|.|++..+. ...+-.++ .--+..|.+|..|++..=..+ | ...+-++|||||..-+-..+..
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~-----~~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASP-----GYARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCc-----hHHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 6677888864444 22221110 112345777888887766566 3 3469999999998876655554
No 144
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=44.02 E-value=52 Score=33.49 Aligned_cols=60 Identities=20% Similarity=0.259 Sum_probs=42.8
Q ss_pred cccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCC
Q 012473 148 YVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTD 222 (463)
Q Consensus 148 ~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~d 222 (463)
+..++..+++.+.+|-..-+ .|+..++.|.|.|-||.-+...|.. .-+.|++++-.-+-|
T Consensus 287 ~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDAtFDD 346 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDATFDD 346 (517)
T ss_pred CcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeecchhh
Confidence 45677777777777765433 3446799999999999988877764 245888887554433
No 145
>PLN02162 triacylglycerol lipase
Probab=43.93 E-value=30 Score=36.57 Aligned_cols=39 Identities=10% Similarity=0.139 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHh
Q 012473 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (463)
Q Consensus 158 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (463)
.+.+.|+..+.++|. .+++++|||-||-.+-..|..+..
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 456667777788885 479999999999988887776654
No 146
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=43.71 E-value=36 Score=34.33 Aligned_cols=28 Identities=25% Similarity=0.213 Sum_probs=25.5
Q ss_pred CceEEEEecCCccccCchhHHHHHHhcC
Q 012473 410 GYRALIFSGDHDMCVPFTGSEAWTRSVG 437 (463)
Q Consensus 410 girVLiY~Gd~D~icn~~Gte~wi~~L~ 437 (463)
..+||+..|+.|.+++....+.+.+.++
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~ 313 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS 313 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC
Confidence 5899999999999999999998888875
No 147
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=43.65 E-value=46 Score=33.75 Aligned_cols=57 Identities=23% Similarity=0.316 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCc
Q 012473 158 DTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGV 220 (463)
Q Consensus 158 ~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 220 (463)
.+.+-++.-...+| ...++++|+|-||-.+...|..|...... ....++=+..|-|-
T Consensus 156 ~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 156 GLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPR 212 (336)
T ss_pred HHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCC
Confidence 34455555556777 45799999999999999999999876532 12334444445443
No 148
>PLN02429 triosephosphate isomerase
Probab=43.59 E-value=53 Score=33.01 Aligned_cols=60 Identities=23% Similarity=0.335 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHhh-CcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 154 KTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~-~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
+.++.+++++++|+.. +.+-....+-|. |||---|.-+..|... -++.|+.||.+.+++.
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 4577889999998864 433222344444 9999999999998764 3489999999998765
No 149
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=43.32 E-value=43 Score=31.47 Aligned_cols=50 Identities=12% Similarity=0.013 Sum_probs=36.6
Q ss_pred ChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhc
Q 012473 151 GDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (463)
Q Consensus 151 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n 201 (463)
+-+..++.+.+.|.+..+..+.- .+++-+.|+|-||.++=.....+....
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 34456778888888777766643 368999999999999976666665543
No 150
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=43.30 E-value=13 Score=34.35 Aligned_cols=16 Identities=31% Similarity=0.852 Sum_probs=13.5
Q ss_pred CCCCEEEEeCCCCCcc
Q 012473 74 SKDPVVLWLNGGPGCS 89 (463)
Q Consensus 74 ~~~Pl~lWlnGGPG~S 89 (463)
.+.|-|||+-|||||.
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 3568899999999985
No 151
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.63 E-value=33 Score=33.12 Aligned_cols=66 Identities=21% Similarity=0.290 Sum_probs=45.9
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhc
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGI 201 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n 201 (463)
..++=|+-| |-|==+.. ...++.++.|+.+...|+. -+...|+-++|+|+||+-.=.+|.++.+..
T Consensus 34 iel~avqlP-GR~~r~~e---p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~g 99 (244)
T COG3208 34 IELLAVQLP-GRGDRFGE---PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERAG 99 (244)
T ss_pred hheeeecCC-CcccccCC---cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHcC
Confidence 446667767 76632221 2335666777777766642 345689999999999999999999997653
No 152
>PF06708 DUF1195: Protein of unknown function (DUF1195); InterPro: IPR010608 This family consists of several plant specific hypothetical proteins of around 160 residues in length. The function of this family is unknown.
Probab=42.47 E-value=30 Score=30.16 Aligned_cols=25 Identities=32% Similarity=0.507 Sum_probs=20.7
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhcc
Q 012473 1 MGKGRLIMYKILACYTLLSFSVLTH 25 (463)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ 25 (463)
.||||.+.+.+.+++|+.++.++.+
T Consensus 32 ~gKgrYK~WaLaAIlLLAfWSM~tg 56 (157)
T PF06708_consen 32 FGKGRYKFWALAAILLLAFWSMFTG 56 (157)
T ss_pred ccCchhHHHHHHHHHHHHHHHHhhe
Confidence 4899999999999998887766643
No 153
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=41.90 E-value=50 Score=31.82 Aligned_cols=67 Identities=18% Similarity=0.212 Sum_probs=39.7
Q ss_pred cceeeecCCCCcccccccCCCCcccC-hHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTG-DLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~-~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
.++|-.|-- |+|=|.....+..... .+.+-.||-.+|..-=..-| ..|+|..|+||||+-.=-+++.
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccccC
Confidence 456666755 8887765443322211 22344455555544333345 5799999999999977655543
No 154
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=38.96 E-value=35 Score=31.84 Aligned_cols=57 Identities=26% Similarity=0.350 Sum_probs=42.1
Q ss_pred CcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHh
Q 012473 136 GVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (463)
Q Consensus 136 G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (463)
|||=|-++-.++ ..+.+.|....+.+| .+||+-. -+.++|-|+|+-.+-.+|.+..+
T Consensus 70 gVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 70 GVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred ccccccCcccCC--cchHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc
Confidence 999887755444 466666777777777 5888643 36999999999888888877643
No 155
>COG0627 Predicted esterase [General function prediction only]
Probab=38.92 E-value=84 Score=31.66 Aligned_cols=130 Identities=23% Similarity=0.187 Sum_probs=65.8
Q ss_pred CCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEec-CCCcccccceeeecCCCCcccccccCCCCcccChHH
Q 012473 76 DPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVN-PYSWTKVSSIIYLDSPAGVGLSYSENKTDYVTGDLK 154 (463)
Q Consensus 76 ~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n-~~sW~~~anllfiDqP~G~GfSy~~~~~~~~~~~~~ 154 (463)
-|| +|+.+|..|.. =.+.+.++++=..+. .+-.++-+ -.-+....++--|+ |+|.|.|+-.+.........
T Consensus 54 ipV-~~~l~G~t~~~--~~~~~~~g~~~~a~~---~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~- 125 (316)
T COG0627 54 IPV-LYLLSGLTCNE--PNVYLLDGLRRQADE---SGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG- 125 (316)
T ss_pred CCE-EEEeCCCCCCC--CceEeccchhhhhhh---cCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC-
Confidence 344 45555688874 223344444322211 11222222 22355555555566 68999987543321100000
Q ss_pred HHHHHHHHH-----HHHHhhCcccCC-CCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 155 TASDTHTFL-----LKWFELYPEFLA-NPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 155 ~a~~~~~fl-----~~f~~~~p~~~~-~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
.-+...|| ..|.+.||.-++ ..-.|+|+|-||+=+-.+|.+-.+. ++.++--.|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR----------FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch----------hceecccccccccc
Confidence 12233333 245566664332 3689999999999888877764211 44444455555654
No 156
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=38.72 E-value=48 Score=31.27 Aligned_cols=107 Identities=25% Similarity=0.277 Sum_probs=66.0
Q ss_pred EEEecCCCCeeEEEEEeeccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceee
Q 012473 51 YVTVDESHGRNLFYYFVESEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIY 130 (463)
Q Consensus 51 y~~v~~~~~~~lfy~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllf 130 (463)
-+.|+ +..+.|.-+-+. +--||-+-|--||+-.. .+|-..+. ++ -. ...|+=
T Consensus 25 kv~vn---g~ql~y~~~G~G-----~~~iLlipGalGs~~tD-----f~pql~~l------------~k--~l-~~Tiva 76 (277)
T KOG2984|consen 25 KVHVN---GTQLGYCKYGHG-----PNYILLIPGALGSYKTD-----FPPQLLSL------------FK--PL-QVTIVA 76 (277)
T ss_pred eeeec---CceeeeeecCCC-----CceeEeccccccccccc-----CCHHHHhc------------CC--CC-ceEEEE
Confidence 34554 577777633221 23567788888887552 34433221 10 01 167899
Q ss_pred ecCCCCcccccccCCC---CcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH
Q 012473 131 LDSPAGVGLSYSENKT---DYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE 196 (463)
Q Consensus 131 iDqP~G~GfSy~~~~~---~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~ 196 (463)
+|.| |.|-|...+.. ..-..|.+.|-++.++|. -.+|-|.|.|=||.-.-..|.+
T Consensus 77 wDPp-GYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk----------~~~fsvlGWSdGgiTalivAak 134 (277)
T KOG2984|consen 77 WDPP-GYGTSRPPERKFEVQFFMKDAEYAVDLMEALK----------LEPFSVLGWSDGGITALIVAAK 134 (277)
T ss_pred ECCC-CCCCCCCCcccchHHHHHHhHHHHHHHHHHhC----------CCCeeEeeecCCCeEEEEeecc
Confidence 9955 99998764332 112456677778887774 2479999999999877666554
No 157
>PLN03037 lipase class 3 family protein; Provisional
Probab=38.25 E-value=66 Score=34.56 Aligned_cols=46 Identities=15% Similarity=0.229 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhhCccc-CCCCEEEEeecccccchHHHHHHHHhh
Q 012473 155 TASDTHTFLLKWFELYPEF-LANPFFIAGESYAGIYVPTLAYEVMKG 200 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~~-~~~~~yi~GESYgG~yvP~la~~i~~~ 200 (463)
+.+++.+-+++..+.+++. ....++|+|||-||--+--.|..|.+.
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~ 342 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARS 342 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHh
Confidence 3456777777777777642 234699999999999998888777654
No 158
>PLN02561 triosephosphate isomerase
Probab=37.61 E-value=72 Score=31.06 Aligned_cols=59 Identities=24% Similarity=0.327 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHhh-CcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCc
Q 012473 154 KTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~-~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp 223 (463)
+.++..++++++++.. +..-....+-|. |||---|.-+..|... .++.|+.||.+.+|+
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 4567788889888753 433223344444 9999999999998754 358999999999986
No 159
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=36.37 E-value=34 Score=31.53 Aligned_cols=32 Identities=22% Similarity=0.118 Sum_probs=28.1
Q ss_pred cCceEEEEecCCccccCchhHHHHHHhcCCCC
Q 012473 409 RGYRALIFSGDHDMCVPFTGSEAWTRSVGYKI 440 (463)
Q Consensus 409 ~girVLiY~Gd~D~icn~~Gte~wi~~L~w~~ 440 (463)
...+|||.+|+.|.+||...++++.++|.-.+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g 174 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAG 174 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcC
Confidence 46899999999999999999999999986333
No 160
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=36.00 E-value=28 Score=32.72 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=29.2
Q ss_pred HHHHhhCcccCCCCEEEEeecccccchHHHHHHHH
Q 012473 164 LKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVM 198 (463)
Q Consensus 164 ~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~ 198 (463)
.+|++.+|+....++=|.|-|.||-.+-.+|....
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 35788999998889999999999999999998863
No 161
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=35.39 E-value=39 Score=27.75 Aligned_cols=28 Identities=25% Similarity=0.450 Sum_probs=26.6
Q ss_pred ceEEEEecCCccccCchhHHHHHHhcCC
Q 012473 411 YRALIFSGDHDMCVPFTGSEAWTRSVGY 438 (463)
Q Consensus 411 irVLiY~Gd~D~icn~~Gte~wi~~L~w 438 (463)
.+||+.+|..|.++|+.+.+...+.|.-
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~ 62 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG 62 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC
Confidence 8999999999999999999999999874
No 162
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=32.55 E-value=99 Score=30.21 Aligned_cols=64 Identities=20% Similarity=0.306 Sum_probs=37.1
Q ss_pred ChHHHHHHHHHHHHHHH-hhC-----cccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcC
Q 012473 151 GDLKTASDTHTFLLKWF-ELY-----PEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVT 221 (463)
Q Consensus 151 ~~~~~a~~~~~fl~~f~-~~~-----p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~ 221 (463)
.+.+.+.++.++|.+=+ ... |++ ..+.|+|||=||+-+-.+|... .+. ...+++++++..+|.-
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~--~~~---~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGN--ASS---SLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhh--ccc---ccccceeEEEEecccc
Confidence 44455566666654411 112 233 2599999999999444444332 111 1246789999887774
No 163
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=32.12 E-value=32 Score=35.53 Aligned_cols=38 Identities=16% Similarity=0.022 Sum_probs=23.5
Q ss_pred CEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCccc
Q 012473 177 PFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEI 225 (463)
Q Consensus 177 ~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~ 225 (463)
.+-++||||||--+-..+..- ..++..++-+||+-|..
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d-----------~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD-----------TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH------------TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHHHHHhhc-----------cCcceEEEeCCcccCCC
Confidence 599999999997766544432 23778889999988753
No 164
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=30.57 E-value=21 Score=24.56 Aligned_cols=17 Identities=18% Similarity=0.036 Sum_probs=13.9
Q ss_pred HHhhhcCcHHHHHhhcC
Q 012473 358 VATLWLNDAAVRTAIHA 374 (463)
Q Consensus 358 ~~~~yLN~~~Vr~ALhV 374 (463)
.+-.-|++||||.+|++
T Consensus 15 gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 34467999999999986
No 165
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=30.41 E-value=3.1e+02 Score=29.39 Aligned_cols=35 Identities=11% Similarity=0.061 Sum_probs=24.3
Q ss_pred HHHHHHHHhhCcccCCCCEEEEeecccccchHHHHH
Q 012473 160 HTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (463)
Q Consensus 160 ~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~ 195 (463)
++++++....|-- ..+++-|+|||.||..|-.++.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHhc
Confidence 4555655555552 2457999999999998866553
No 166
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=30.25 E-value=38 Score=23.40 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=24.8
Q ss_pred cCcCCcccccccchhhhhcCCCCCHHHHHHHHH
Q 012473 218 NGVTDEEIDGNALVPFVHGMGLISDDLYEEVQN 250 (463)
Q Consensus 218 Ng~~dp~~~~~s~~~~~y~~gli~~~~~~~~~~ 250 (463)
.|.+||..-..-..+=|+..|+||.+....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 377788776665677889999999998877654
No 167
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=29.56 E-value=1.4e+02 Score=28.77 Aligned_cols=59 Identities=31% Similarity=0.459 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhh-CcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 154 KTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~-~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
+.+.+.+.+|++++.. +.+ ....+-|. |||---|.=+..|.+.. ++.|+.||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 3467788999998864 433 33344444 99999999999987643 389999999998854
No 168
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=28.32 E-value=1.5e+02 Score=27.07 Aligned_cols=80 Identities=14% Similarity=0.164 Sum_probs=50.2
Q ss_pred eeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHH--HHhhccCCC
Q 012473 128 IIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYE--VMKGIDAGE 205 (463)
Q Consensus 128 llfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~--i~~~n~~~~ 205 (463)
+--|+-|+..+.. .+..+....++++.+.|+.+..+-| +.++.|+|-|=|++-+-.++.. +...
T Consensus 42 ~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~----- 107 (179)
T PF01083_consen 42 VQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD----- 107 (179)
T ss_dssp EEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH-----
T ss_pred EEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh-----
Confidence 3335667666652 2334566778889999999999999 4589999999999888777666 1110
Q ss_pred CCceeeeee-eeccCcCC
Q 012473 206 KPVLNFKGY-LVGNGVTD 222 (463)
Q Consensus 206 ~~~inLkGi-~iGNg~~d 222 (463)
..=++.++ .+|||.-.
T Consensus 108 -~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 108 -VADRIAAVVLFGDPRRG 124 (179)
T ss_dssp -HHHHEEEEEEES-TTTB
T ss_pred -hhhhEEEEEEecCCccc
Confidence 12246664 66888764
No 169
>PRK13604 luxD acyl transferase; Provisional
Probab=28.24 E-value=72 Score=31.99 Aligned_cols=28 Identities=14% Similarity=0.143 Sum_probs=25.9
Q ss_pred CceEEEEecCCccccCchhHHHHHHhcC
Q 012473 410 GYRALIFSGDHDMCVPFTGSEAWTRSVG 437 (463)
Q Consensus 410 girVLiY~Gd~D~icn~~Gte~wi~~L~ 437 (463)
..+||+.+|+.|..|+..+.+...++++
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~ 229 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR 229 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc
Confidence 4899999999999999999999998874
No 170
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=28.10 E-value=76 Score=30.10 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHhhC--cccCCCCEEEEeeccccc
Q 012473 154 KTASDTHTFLLKWFELY--PEFLANPFFIAGESYAGI 188 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~~--p~~~~~~~yi~GESYgG~ 188 (463)
+.++.+.+.++...+.. ..-...++.|.|||.||.
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl 97 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL 97 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH
Confidence 44566666666666555 122356899999999996
No 171
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=27.96 E-value=34 Score=33.84 Aligned_cols=35 Identities=14% Similarity=0.133 Sum_probs=21.8
Q ss_pred HHHHHHHhhCcccCCCCEEEEeecccccchHHHHH
Q 012473 161 TFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (463)
Q Consensus 161 ~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~ 195 (463)
+.|..|...-..|-...++++|||-||..+.-+..
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~ 295 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGI 295 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcc
Confidence 33444443333344578999999999976554443
No 172
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=27.96 E-value=34 Score=33.84 Aligned_cols=35 Identities=14% Similarity=0.133 Sum_probs=21.8
Q ss_pred HHHHHHHhhCcccCCCCEEEEeecccccchHHHHH
Q 012473 161 TFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY 195 (463)
Q Consensus 161 ~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~ 195 (463)
+.|..|...-..|-...++++|||-||..+.-+..
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~ 295 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGI 295 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcc
Confidence 33444443333344578999999999976554443
No 173
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=27.33 E-value=1.1e+02 Score=25.68 Aligned_cols=33 Identities=18% Similarity=0.213 Sum_probs=27.8
Q ss_pred HHhhcCceEEEEecCCccccCchhHHHHHHhcC
Q 012473 405 NLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVG 437 (463)
Q Consensus 405 ~LL~~girVLiY~Gd~D~icn~~Gte~wi~~L~ 437 (463)
.+-...++|++..|+.|.+++....+.+.++++
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 344567899999999999999999999988888
No 174
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=26.59 E-value=37 Score=22.64 Aligned_cols=12 Identities=33% Similarity=1.088 Sum_probs=6.3
Q ss_pred CCEEEEeCCCCC
Q 012473 76 DPVVLWLNGGPG 87 (463)
Q Consensus 76 ~Pl~lWlnGGPG 87 (463)
.-=+||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345799999998
No 175
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=26.42 E-value=1.8e+02 Score=28.28 Aligned_cols=59 Identities=29% Similarity=0.393 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHhh-CcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 154 KTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~-~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
+.++.+++|++.++.. +. -....+-|. |||---|.-+..+... -++.|+.||.+.+++.
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 4577888999988753 33 112234444 9999999999998754 3489999999998765
No 176
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=26.13 E-value=59 Score=32.19 Aligned_cols=31 Identities=23% Similarity=0.221 Sum_probs=27.2
Q ss_pred CceEEEEecCCccccCchhHHHHHHhcCCCC
Q 012473 410 GYRALIFSGDHDMCVPFTGSEAWTRSVGYKI 440 (463)
Q Consensus 410 girVLiY~Gd~D~icn~~Gte~wi~~L~w~~ 440 (463)
..+|+||+|..|-++|+..+++.++++-=.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G 249 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAG 249 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcC
Confidence 5899999999999999999999998874344
No 177
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=25.91 E-value=3.3e+02 Score=29.54 Aligned_cols=84 Identities=12% Similarity=-0.014 Sum_probs=48.8
Q ss_pred cceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHH-HHHhhccCC
Q 012473 126 SSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAY-EVMKGIDAG 204 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~-~i~~~n~~~ 204 (463)
..++-||-+ |.|.|..... -++-+.+.+.++|..+.+..+ ..++.+.|+|-||..+...+. ....+..
T Consensus 221 f~V~~iDwr-gpg~s~~~~~-----~ddY~~~~i~~al~~v~~~~g---~~kv~lvG~cmGGtl~a~ala~~aa~~~~-- 289 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADKT-----FDDYIRDGVIAALEVVEAITG---EKQVNCVGYCIGGTLLSTALAYLAARGDD-- 289 (532)
T ss_pred cEEEEEECC-CCCcccccCC-----hhhhHHHHHHHHHHHHHHhcC---CCCeEEEEECcCcHHHHHHHHHHHHhCCC--
Confidence 346667754 7776633211 111222345566665554443 468999999999998766333 2222211
Q ss_pred CCCceeeeeeeeccCcCCcc
Q 012473 205 EKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 205 ~~~~inLkGi~iGNg~~dp~ 224 (463)
-.++++++.+..+|..
T Consensus 290 ----~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 290 ----KRIKSATFFTTLLDFS 305 (532)
T ss_pred ----CccceEEEEecCcCCC
Confidence 1378888888777765
No 178
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=25.39 E-value=75 Score=31.45 Aligned_cols=48 Identities=27% Similarity=0.474 Sum_probs=34.7
Q ss_pred cccceeeecCCCCcccccccCCCCcccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeeccccc
Q 012473 124 KVSSIIYLDSPAGVGLSYSENKTDYVTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGI 188 (463)
Q Consensus 124 ~~anllfiDqP~G~GfSy~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~ 188 (463)
+.+-||-||-|+|+|-| ..|+++.+-|- |..||++.--.+|+ .|||+-
T Consensus 69 enSkvI~VeGnI~sGK~-------------klAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D 116 (393)
T KOG3877|consen 69 ENSKVIVVEGNIGSGKT-------------KLAKELAEQLG--FVHFPEFRMDDIYV--DSYGND 116 (393)
T ss_pred ccceEEEEeCCcccCch-------------hHHHHHHHHhC--Ccccccccccceee--cccCcc
Confidence 34678999999999965 23555555554 67899998767777 688764
No 179
>PTZ00333 triosephosphate isomerase; Provisional
Probab=25.19 E-value=1.5e+02 Score=28.83 Aligned_cols=59 Identities=25% Similarity=0.419 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHhh-CcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCc
Q 012473 154 KTASDTHTFLLKWFEL-YPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDE 223 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~~-~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp 223 (463)
+.+++.+.++++++.. +.......+-|. |||---|.-+..|... -++.|+.||.+.+++
T Consensus 183 e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 183 EQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 5678889999987753 432222334444 9999999999998754 348999999998874
No 180
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.17 E-value=95 Score=35.07 Aligned_cols=97 Identities=21% Similarity=0.261 Sum_probs=54.1
Q ss_pred CCCEEEEeCCCCCcc-------hHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCC
Q 012473 75 KDPVVLWLNGGPGCS-------SFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTD 147 (463)
Q Consensus 75 ~~Pl~lWlnGGPG~S-------S~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~ 147 (463)
.-|| |++-|--|+- |...+....||++=.. -.+||++. +.. -+| ..=-||.-
T Consensus 89 GIPV-LFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~---------~~d~~~~~-DFF---aVD--FnEe~tAm----- 147 (973)
T KOG3724|consen 89 GIPV-LFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTE---------DRDNPFSF-DFF---AVD--FNEEFTAM----- 147 (973)
T ss_pred CceE-EEecCCCCchHHHHHHHHHHhhhhcCCchhhhh---------cccCcccc-ceE---EEc--ccchhhhh-----
Confidence 3465 4566666642 4455566789987332 24567665 222 222 01111100
Q ss_pred cccChHHHHHHHHHHHHHHH---hhCcccC---CCCEEEEeecccccchHH
Q 012473 148 YVTGDLKTASDTHTFLLKWF---ELYPEFL---ANPFFIAGESYAGIYVPT 192 (463)
Q Consensus 148 ~~~~~~~~a~~~~~fl~~f~---~~~p~~~---~~~~yi~GESYgG~yvP~ 192 (463)
..+...+.++.+.++|+.-+ +.-++++ ...+.|.|||+||.-+=+
T Consensus 148 ~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra 198 (973)
T KOG3724|consen 148 HGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARA 198 (973)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHH
Confidence 11355667777777776554 4445565 556999999999975443
No 181
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=24.65 E-value=2.1e+02 Score=28.26 Aligned_cols=66 Identities=21% Similarity=0.134 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHhhCcc--c-CCCCEEEEeecccccchHHHHHHHHhhccCCCCCcee--eeeeeeccCcCCccc
Q 012473 155 TASDTHTFLLKWFELYPE--F-LANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLN--FKGYLVGNGVTDEEI 225 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~--~-~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~in--LkGi~iGNg~~dp~~ 225 (463)
.|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|..+... - .+.++ |.|.+.|.+-.|...
T Consensus 47 ~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~-Y---ApeL~~~l~Gaa~gg~~~dl~~ 117 (290)
T PF03583_consen 47 EAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPS-Y---APELNRDLVGAAAGGPPADLAA 117 (290)
T ss_pred HHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHH-h---CcccccceeEEeccCCccCHHH
Confidence 344445444443333332 2 35689999999998754 334444332 1 24688 999999998877644
No 182
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=24.48 E-value=53 Score=30.29 Aligned_cols=25 Identities=28% Similarity=0.674 Sum_probs=16.6
Q ss_pred CCCCCEEEEeCCCCCc--chHhhHhhh
Q 012473 73 PSKDPVVLWLNGGPGC--SSFDGFIYE 97 (463)
Q Consensus 73 ~~~~Pl~lWlnGGPG~--SS~~g~f~E 97 (463)
+...|+++.+-|+||| |++...+.+
T Consensus 11 ~~~~P~~~i~aG~~GsGKSt~~~~~~~ 37 (199)
T PF06414_consen 11 PQEKPTLIIIAGQPGSGKSTLARQLLE 37 (199)
T ss_dssp --SS-EEEEEES-TTSTTHHHHHHHHH
T ss_pred cccCCEEEEEeCCCCCCHHHHHHHhhh
Confidence 6678999999999999 677644444
No 183
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=24.41 E-value=79 Score=28.79 Aligned_cols=28 Identities=25% Similarity=0.408 Sum_probs=23.6
Q ss_pred ccCCCCEEEEeecccccchHHHHHHHHh
Q 012473 172 EFLANPFFIAGESYAGIYVPTLAYEVMK 199 (463)
Q Consensus 172 ~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (463)
....-|+.|.|.||||.....+|..+..
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcC
Confidence 4455689999999999999999998753
No 184
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=24.17 E-value=6e+02 Score=24.92 Aligned_cols=37 Identities=22% Similarity=0.273 Sum_probs=22.9
Q ss_pred HHHHHHHHHH----HHhhCcccCCCCEEEEeecccccchHH
Q 012473 156 ASDTHTFLLK----WFELYPEFLANPFFIAGESYAGIYVPT 192 (463)
Q Consensus 156 a~~~~~fl~~----f~~~~p~~~~~~~yi~GESYgG~yvP~ 192 (463)
|+.+.+||.+ |.+.-=+....+--|+||||||-.+-.
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~ 153 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLF 153 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHH
Confidence 4556666655 333311223345899999999987643
No 185
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=23.89 E-value=71 Score=30.36 Aligned_cols=26 Identities=23% Similarity=0.470 Sum_probs=21.4
Q ss_pred CceEEEEecCCccccCchhHHHHHHh
Q 012473 410 GYRALIFSGDHDMCVPFTGSEAWTRS 435 (463)
Q Consensus 410 girVLiY~Gd~D~icn~~Gte~wi~~ 435 (463)
+++++|++|+.|..|+....++.++.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 57899999999999998877665554
No 186
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=23.86 E-value=1.2e+02 Score=30.49 Aligned_cols=90 Identities=21% Similarity=0.175 Sum_probs=53.9
Q ss_pred ccCCCCCCCEEEEeCCCCCcchHhhHhhhcCCceecCCCCCCCCCeeEecCCCcccccceeeecCCCCcccccccCCCCc
Q 012473 69 SEGNPSKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAPTTKGSLPKLHVNPYSWTKVSSIIYLDSPAGVGLSYSENKTDY 148 (463)
Q Consensus 69 s~~~~~~~Pl~lWlnGGPG~SS~~g~f~E~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqP~G~GfSy~~~~~~~ 148 (463)
+-.+..+.|-++.++|==|.---+.-+.- +.. .++. +.+.=||.- ..|.|--..
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k------~Ls------~~l~---------~~v~~vd~R-nHG~Sp~~~---- 98 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENWRSVAK------NLS------RKLG---------RDVYAVDVR-NHGSSPKIT---- 98 (315)
T ss_pred cccccCCCCceEEecccccCCCCHHHHHH------Hhc------cccc---------CceEEEecc-cCCCCcccc----
Confidence 33456678888899986665422322220 000 0111 156667755 777774322
Q ss_pred ccChHHHHHHHHHHHHHHHhhCcccCCCCEEEEeecccc
Q 012473 149 VTGDLKTASDTHTFLLKWFELYPEFLANPFFIAGESYAG 187 (463)
Q Consensus 149 ~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG 187 (463)
.++-...|+++..||..+-. .++..+..|.|||.||
T Consensus 99 ~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 99 VHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred ccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 24556778888888875432 2445689999999999
No 187
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=23.28 E-value=1.3e+02 Score=28.03 Aligned_cols=45 Identities=16% Similarity=0.355 Sum_probs=29.6
Q ss_pred cceeeecCCCCcccccccCC-----CCc--ccChHHHHHHHHHHHHHHHhhC
Q 012473 126 SSIIYLDSPAGVGLSYSENK-----TDY--VTGDLKTASDTHTFLLKWFELY 170 (463)
Q Consensus 126 anllfiDqP~G~GfSy~~~~-----~~~--~~~~~~~a~~~~~fl~~f~~~~ 170 (463)
.++|+||||.-|=|.-.... ... ..+|..+...+..+|-.|.+.-
T Consensus 101 P~fL~lDQPSQvYfp~~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~~ 152 (193)
T PF12532_consen 101 PSFLFLDQPSQVYFPSRDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKEI 152 (193)
T ss_pred CCeeeecCCCcCcCCCcccccccchhhccccchHHHHHHHHHHHHHHHHHHh
Confidence 48999999988877651111 111 2355566778888888887653
No 188
>COG4425 Predicted membrane protein [Function unknown]
Probab=22.37 E-value=1.1e+02 Score=32.16 Aligned_cols=36 Identities=14% Similarity=0.293 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhhCcccCCCCEEEEeeccccc
Q 012473 153 LKTASDTHTFLLKWFELYPEFLANPFFIAGESYAGI 188 (463)
Q Consensus 153 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~ 188 (463)
.++|+.+.++.-.....-|+-..-++|+.|||-|..
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 567888999998888888987666799999998753
No 189
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=22.23 E-value=39 Score=35.00 Aligned_cols=41 Identities=5% Similarity=0.058 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHh
Q 012473 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMK 199 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~ 199 (463)
.+..|.+.++.-++.. .+++.|.|||.||-++-.+-....+
T Consensus 102 ~~~~lk~~ie~~~~~~----~~kv~li~HSmGgl~~~~fl~~~~~ 142 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKKN----GKKVVLIAHSMGGLVARYFLQWMPQ 142 (389)
T ss_pred HHHHHHHHHHHHHHhc----CCcEEEEEeCCCchHHHHHHHhccc
Confidence 3444555555544433 5799999999999998887777643
No 190
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=22.06 E-value=63 Score=30.44 Aligned_cols=56 Identities=20% Similarity=0.185 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhhCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 155 TASDTHTFLLKWFELYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
..+++..+|++=|...+ .. .+|+|.|.||.-+-.+|.+-.+ -+.+++.-+|.+++.
T Consensus 98 l~~el~p~i~~~~~~~~---~~-~~i~G~S~GG~~Al~~~l~~Pd----------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDP---DR-RAIAGHSMGGYGALYLALRHPD----------LFGAVIAFSGALDPS 153 (251)
T ss_dssp HHTHHHHHHHHHSSEEE---CC-EEEEEETHHHHHHHHHHHHSTT----------TESEEEEESEESETT
T ss_pred hhccchhHHHHhccccc---ce-eEEeccCCCcHHHHHHHHhCcc----------ccccccccCcccccc
Confidence 45555666664333332 33 9999999999988887776221 277888888887765
No 191
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=21.57 E-value=93 Score=28.99 Aligned_cols=31 Identities=35% Similarity=0.445 Sum_probs=26.0
Q ss_pred CCEEEEeCCCCCc--chHhhHhhhcCCceecCC
Q 012473 76 DPVVLWLNGGPGC--SSFDGFIYEHGPFNFEAP 106 (463)
Q Consensus 76 ~Pl~lWlnGGPG~--SS~~g~f~E~GP~~~~~~ 106 (463)
.|++|=+.||+|| |.+.-.|.+.|-..++.|
T Consensus 4 ~~~~igitG~igsGKSt~~~~l~~~g~~v~d~D 36 (208)
T PRK14731 4 LPFLVGVTGGIGSGKSTVCRFLAEMGCELFEAD 36 (208)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCCCeEEecc
Confidence 5789999999999 677788888988888754
No 192
>PRK01184 hypothetical protein; Provisional
Probab=21.55 E-value=67 Score=28.94 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=17.6
Q ss_pred EEEEeCCCCCcc--hHhhHhhhcCCceec
Q 012473 78 VVLWLNGGPGCS--SFDGFIYEHGPFNFE 104 (463)
Q Consensus 78 l~lWlnGGPG~S--S~~g~f~E~GP~~~~ 104 (463)
.+|+|.|+||+. .+.-++.+.|=..+.
T Consensus 2 ~~i~l~G~~GsGKsT~a~~~~~~g~~~i~ 30 (184)
T PRK01184 2 KIIGVVGMPGSGKGEFSKIAREMGIPVVV 30 (184)
T ss_pred cEEEEECCCCCCHHHHHHHHHHcCCcEEE
Confidence 589999999994 443445556533333
No 193
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=21.31 E-value=2.1e+02 Score=28.71 Aligned_cols=71 Identities=11% Similarity=-0.024 Sum_probs=39.7
Q ss_pred ChHHHHHHHHHHHHHHHhhCcc-cCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcccc
Q 012473 151 GDLKTASDTHTFLLKWFELYPE-FLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEEID 226 (463)
Q Consensus 151 ~~~~~a~~~~~fl~~f~~~~p~-~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~~~ 226 (463)
+.++.++++.+.++-+-..... +...++.|+|||=|=.=|-..... .+... ..-.++|+|+-.|.-|.+..
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~---~~~~~--~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSS---PNPSP--SRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH----TT-----CCCEEEEEEEEE---TTST
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhc---cCccc--cccceEEEEEeCCCCChhHh
Confidence 5556677777777655555422 345689999999987655444433 32211 13569999999999887654
No 194
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=21.16 E-value=87 Score=23.10 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHhhCcccCC
Q 012473 155 TASDTHTFLLKWFELYPEFLA 175 (463)
Q Consensus 155 ~a~~~~~fl~~f~~~~p~~~~ 175 (463)
.-+++++.|+.|.+.||.|..
T Consensus 6 iPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 6 IPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred ccHHHHHHHHHHHHcCCCchH
Confidence 346799999999999999975
No 195
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=21.07 E-value=77 Score=27.44 Aligned_cols=17 Identities=29% Similarity=0.561 Sum_probs=14.8
Q ss_pred CCCCCEEEEeCCCCCcc
Q 012473 73 PSKDPVVLWLNGGPGCS 89 (463)
Q Consensus 73 ~~~~Pl~lWlnGGPG~S 89 (463)
..++||||=|+|.||+.
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 45689999999999985
No 196
>PRK06762 hypothetical protein; Provisional
Probab=21.03 E-value=55 Score=28.94 Aligned_cols=21 Identities=14% Similarity=0.395 Sum_probs=15.4
Q ss_pred CEEEEeCCCCCc--chHhhHhhh
Q 012473 77 PVVLWLNGGPGC--SSFDGFIYE 97 (463)
Q Consensus 77 Pl~lWlnGGPG~--SS~~g~f~E 97 (463)
|.++|+.|.||| |.+.-.+.+
T Consensus 2 ~~li~i~G~~GsGKST~A~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIAKQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 789999999999 445444443
No 197
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=20.83 E-value=32 Score=19.13 Aligned_cols=6 Identities=0% Similarity=0.097 Sum_probs=2.2
Q ss_pred HHHHHH
Q 012473 12 LACYTL 17 (463)
Q Consensus 12 ~~~~~~ 17 (463)
+.++++
T Consensus 5 vIIlvv 10 (19)
T PF13956_consen 5 VIILVV 10 (19)
T ss_pred hHHHHH
Confidence 333333
No 198
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=20.52 E-value=1.3e+02 Score=20.26 Aligned_cols=27 Identities=22% Similarity=0.412 Sum_probs=12.0
Q ss_pred eEEEEEeeccCCCCCCCEEEEeCCCCC
Q 012473 61 NLFYYFVESEGNPSKDPVVLWLNGGPG 87 (463)
Q Consensus 61 ~lfy~f~es~~~~~~~Pl~lWlnGGPG 87 (463)
+-+|||..+........--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 456666444332223333344444564
No 199
>PRK15492 triosephosphate isomerase; Provisional
Probab=20.25 E-value=2.1e+02 Score=27.97 Aligned_cols=59 Identities=17% Similarity=0.314 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHh-hCcccCCCCEEEEeecccccchHHHHHHHHhhccCCCCCceeeeeeeeccCcCCcc
Q 012473 154 KTASDTHTFLLKWFE-LYPEFLANPFFIAGESYAGIYVPTLAYEVMKGIDAGEKPVLNFKGYLVGNGVTDEE 224 (463)
Q Consensus 154 ~~a~~~~~fl~~f~~-~~p~~~~~~~yi~GESYgG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~~dp~ 224 (463)
+.+.+..++|++++. .+.+- ...+-|. |||---|.-+..|.... ++.|+.||..-.|+.
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~~--------diDG~LvG~aSl~~~ 248 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQP--------HIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcCC--------CCCEEEeehhhcCHH
Confidence 456778899998864 34322 2344454 99999999999997653 489999999998875
No 200
>PF05414 DUF1717: Viral domain of unknown function (DUF1717); InterPro: IPR008745 The domain is found towards the N terminus of the polyprotein of Apple stem grooving virus (strain P-209) (ASGV), Citrus tatter leaf virus and from Apple stem grooving virus (strain Korea) (ASGV) (Pear black necrotic leaf spot virus). Its function is unknown [, ].
Probab=20.17 E-value=63 Score=25.67 Aligned_cols=12 Identities=50% Similarity=0.927 Sum_probs=10.6
Q ss_pred cCceEEEEecCC
Q 012473 409 RGYRALIFSGDH 420 (463)
Q Consensus 409 ~girVLiY~Gd~ 420 (463)
-|+||+||.||.
T Consensus 39 lgyrVhiyyGdS 50 (101)
T PF05414_consen 39 LGYRVHIYYGDS 50 (101)
T ss_pred cccEEEEEecce
Confidence 389999999986
Done!