Query 012474
Match_columns 463
No_of_seqs 132 out of 1224
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 10:08:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.2E-69 4.1E-74 529.8 33.1 437 10-462 9-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.3E-64 4.5E-69 504.8 35.4 447 12-463 6-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 1.7E-61 5.7E-66 480.7 42.5 439 12-462 4-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 9.1E-62 3.1E-66 479.5 32.8 436 12-462 5-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 5.4E-59 1.9E-63 460.9 35.7 426 13-461 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.9E-46 9.8E-51 368.4 30.7 398 10-461 8-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.7E-45 9.2E-50 358.8 26.1 366 5-458 13-397 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.8E-43 9.4E-48 345.8 25.1 373 15-458 1-397 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 4.4E-42 1.5E-46 337.6 27.3 380 11-462 17-414 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 6E-43 2.1E-47 343.6 17.5 371 15-456 1-395 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 4.8E-41 1.6E-45 328.8 29.1 377 13-461 3-398 (402)
12 2yjn_A ERYCIII, glycosyltransf 100.0 1.1E-40 3.7E-45 330.1 27.6 376 9-461 15-435 (441)
13 3h4t_A Glycosyltransferase GTF 100.0 1.9E-41 6.5E-46 331.2 18.6 373 15-461 1-382 (404)
14 2iyf_A OLED, oleandomycin glyc 100.0 1.4E-39 4.6E-44 321.4 27.7 379 12-460 5-398 (430)
15 2p6p_A Glycosyl transferase; X 100.0 8.5E-39 2.9E-43 310.9 27.8 353 15-461 1-379 (384)
16 4fzr_A SSFS6; structural genom 100.0 3.9E-38 1.3E-42 307.7 16.8 363 6-455 7-394 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 3.9E-37 1.3E-41 300.6 22.7 358 7-460 13-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.5E-35 5.3E-40 288.7 21.3 355 14-460 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.7E-33 9.3E-38 274.7 26.2 371 6-461 12-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2.7E-30 9.3E-35 248.1 20.2 307 15-423 3-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 2.1E-27 7.2E-32 202.9 13.8 159 264-440 9-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 6.2E-21 2.1E-25 183.5 23.2 338 14-463 6-357 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.5E-16 5.2E-21 144.9 14.9 116 275-405 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2.8E-16 9.5E-21 137.2 8.9 131 274-419 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.4 2.9E-11 9.8E-16 118.8 26.1 370 10-462 16-424 (438)
26 3fro_A GLGA glycogen synthase; 99.4 3E-11 1E-15 118.5 23.9 382 13-463 1-430 (439)
27 3okp_A GDP-mannose-dependent a 99.4 4.8E-12 1.7E-16 122.4 17.4 344 12-463 2-379 (394)
28 2jjm_A Glycosyl transferase, g 99.3 1.2E-09 4.1E-14 105.6 29.8 347 14-462 15-384 (394)
29 2gek_A Phosphatidylinositol ma 99.3 2.1E-10 7.3E-15 111.3 24.1 339 12-462 18-382 (406)
30 2iuy_A Avigt4, glycosyltransfe 99.3 1.4E-10 4.6E-15 110.0 17.9 125 279-421 164-307 (342)
31 2iw1_A Lipopolysaccharide core 99.3 1.1E-09 3.9E-14 104.8 24.6 129 276-423 195-338 (374)
32 1vgv_A UDP-N-acetylglucosamine 99.3 1E-10 3.6E-15 112.7 16.8 129 275-422 204-342 (384)
33 1v4v_A UDP-N-acetylglucosamine 99.2 1E-10 3.6E-15 112.4 15.4 128 275-422 197-334 (376)
34 2r60_A Glycosyl transferase, g 99.2 1.8E-09 6.1E-14 107.9 24.4 168 277-462 262-458 (499)
35 3ot5_A UDP-N-acetylglucosamine 99.2 1.2E-10 4.1E-15 112.7 14.8 77 336-422 282-361 (403)
36 3dzc_A UDP-N-acetylglucosamine 99.2 1.2E-10 4E-15 112.6 13.6 158 275-462 229-396 (396)
37 3beo_A UDP-N-acetylglucosamine 99.2 4.8E-10 1.6E-14 107.6 15.9 163 275-461 204-374 (375)
38 2x6q_A Trehalose-synthase TRET 99.1 5E-09 1.7E-13 102.0 20.3 112 335-463 292-414 (416)
39 3s28_A Sucrose synthase 1; gly 98.8 1.5E-07 5.3E-12 97.8 18.4 168 276-461 571-767 (816)
40 4hwg_A UDP-N-acetylglucosamine 98.7 2.3E-08 7.8E-13 95.8 8.9 128 276-423 203-343 (385)
41 3oy2_A Glycosyltransferase B73 98.7 3.4E-06 1.2E-10 81.7 22.7 109 338-462 256-389 (413)
42 1rzu_A Glycogen synthase 1; gl 98.7 7.8E-07 2.7E-11 88.3 17.8 161 278-462 292-474 (485)
43 2qzs_A Glycogen synthase; glyc 98.6 1E-06 3.4E-11 87.5 17.5 163 276-462 291-475 (485)
44 2vsy_A XCC0866; transferase, g 98.6 2.4E-05 8.2E-10 79.2 26.5 116 336-462 434-558 (568)
45 2f9f_A First mannosyl transfer 98.4 4E-07 1.4E-11 77.1 7.0 129 278-423 24-163 (177)
46 2hy7_A Glucuronosyltransferase 98.4 1.2E-05 4.2E-10 77.7 17.6 74 336-423 265-353 (406)
47 2xci_A KDO-transferase, 3-deox 98.4 1.6E-05 5.6E-10 75.8 18.1 96 338-440 262-364 (374)
48 3vue_A GBSS-I, granule-bound s 98.1 0.001 3.5E-08 66.4 24.2 167 276-463 326-511 (536)
49 2x0d_A WSAF; GT4 family, trans 97.9 0.00027 9.2E-09 68.3 15.5 79 336-423 295-380 (413)
50 4gyw_A UDP-N-acetylglucosamine 97.8 0.00037 1.3E-08 72.2 16.0 134 274-422 520-668 (723)
51 2bfw_A GLGA glycogen synthase; 97.7 0.00027 9.2E-09 60.6 11.0 78 337-423 96-182 (200)
52 3qhp_A Type 1 capsular polysac 97.7 0.00013 4.3E-09 60.6 8.5 140 277-437 2-156 (166)
53 1psw_A ADP-heptose LPS heptosy 97.5 0.002 7E-08 60.4 15.5 103 15-139 1-106 (348)
54 3tov_A Glycosyl transferase fa 97.5 0.003 1E-07 59.3 16.3 107 11-139 5-115 (349)
55 3q3e_A HMW1C-like glycosyltran 97.4 0.0014 5E-08 65.2 12.9 140 276-423 440-589 (631)
56 3rhz_A GTF3, nucleotide sugar 97.3 0.00054 1.9E-08 64.0 8.1 109 337-458 215-335 (339)
57 2gt1_A Lipopolysaccharide hept 95.7 0.069 2.4E-06 49.3 10.8 131 275-422 177-322 (326)
58 3ty2_A 5'-nucleotidase SURE; s 93.2 0.75 2.6E-05 40.3 10.5 46 10-57 7-52 (261)
59 2phj_A 5'-nucleotidase SURE; S 88.3 7.4 0.00025 33.9 12.1 41 15-57 2-42 (251)
60 1j9j_A Stationary phase surviV 88.2 8.2 0.00028 33.6 12.4 111 15-143 1-129 (247)
61 1l5x_A SurviVal protein E; str 87.6 6 0.0002 35.2 11.3 110 15-143 1-128 (280)
62 2e6c_A 5'-nucleotidase SURE; S 86.4 13 0.00045 32.2 12.6 109 15-143 1-130 (244)
63 3nb0_A Glycogen [starch] synth 83.3 2.8 9.5E-05 42.4 7.7 40 342-383 499-551 (725)
64 2v4n_A Multifunctional protein 82.7 24 0.00081 30.8 12.8 42 14-57 1-42 (254)
65 4dzz_A Plasmid partitioning pr 82.2 4.8 0.00017 33.6 8.1 39 15-53 1-41 (206)
66 1g5t_A COB(I)alamin adenosyltr 81.8 5.8 0.0002 33.2 8.1 99 13-124 27-131 (196)
67 3qxc_A Dethiobiotin synthetase 80.0 14 0.00048 32.0 10.3 39 12-50 18-58 (242)
68 2wqk_A 5'-nucleotidase SURE; S 78.2 9.6 0.00033 33.3 8.6 27 29-56 15-41 (251)
69 3t5t_A Putative glycosyltransf 77.3 11 0.00038 36.6 9.6 109 337-461 353-471 (496)
70 1uqt_A Alpha, alpha-trehalose- 74.8 13 0.00045 36.0 9.5 103 341-462 337-453 (482)
71 1ccw_A Protein (glutamate muta 74.0 4.3 0.00015 31.7 4.8 39 13-51 2-40 (137)
72 4b4o_A Epimerase family protei 73.4 2.9 0.0001 37.5 4.3 32 15-50 1-32 (298)
73 3vot_A L-amino acid ligase, BL 72.5 19 0.00066 34.1 10.0 96 12-137 3-101 (425)
74 2yxb_A Coenzyme B12-dependent 71.8 3.5 0.00012 33.3 3.9 40 12-51 16-55 (161)
75 3zqu_A Probable aromatic acid 71.6 5.7 0.00019 33.6 5.3 38 13-51 3-40 (209)
76 1id1_A Putative potassium chan 70.9 3.5 0.00012 32.8 3.7 35 12-51 1-35 (153)
77 1sbz_A Probable aromatic acid 70.9 5.2 0.00018 33.5 4.8 36 15-51 1-37 (197)
78 2iz6_A Molybdenum cofactor car 68.4 20 0.00067 29.3 7.7 76 340-421 93-173 (176)
79 2gk4_A Conserved hypothetical 67.4 23 0.00077 30.4 8.2 23 30-52 31-53 (232)
80 3ug7_A Arsenical pump-driving 67.3 4.3 0.00015 37.6 4.0 40 14-53 25-65 (349)
81 3cio_A ETK, tyrosine-protein k 67.1 14 0.00047 33.2 7.3 41 12-52 101-143 (299)
82 3lqk_A Dipicolinate synthase s 66.7 8.6 0.00029 32.3 5.3 41 13-54 6-47 (201)
83 2vo1_A CTP synthase 1; pyrimid 66.1 6.4 0.00022 34.4 4.4 48 5-52 13-63 (295)
84 1lss_A TRK system potassium up 64.6 6.1 0.00021 30.4 3.9 34 13-51 3-36 (140)
85 1kjn_A MTH0777; hypotethical p 64.3 10 0.00036 29.7 4.8 42 11-52 3-46 (157)
86 3qjg_A Epidermin biosynthesis 63.9 7.9 0.00027 31.7 4.5 38 15-53 6-43 (175)
87 3la6_A Tyrosine-protein kinase 63.7 14 0.00047 33.0 6.5 41 13-53 90-132 (286)
88 3l4e_A Uncharacterized peptida 63.7 14 0.00047 31.2 6.1 45 266-310 18-62 (206)
89 2r8r_A Sensor protein; KDPD, P 62.2 14 0.00047 31.7 5.8 41 12-52 4-44 (228)
90 3dm5_A SRP54, signal recogniti 62.2 12 0.00042 35.7 6.1 42 13-54 99-140 (443)
91 1xmp_A PURE, phosphoribosylami 61.7 61 0.0021 26.0 11.4 140 275-443 10-163 (170)
92 1y80_A Predicted cobalamin bin 61.1 9.9 0.00034 32.1 4.8 40 12-51 86-125 (210)
93 1mvl_A PPC decarboxylase athal 60.4 10 0.00034 32.1 4.6 40 12-53 17-56 (209)
94 2i2x_B MTAC, methyltransferase 60.3 13 0.00045 32.5 5.6 40 12-51 121-160 (258)
95 2g1u_A Hypothetical protein TM 59.7 11 0.00036 30.0 4.6 36 12-52 17-52 (155)
96 3mc3_A DSRE/DSRF-like family p 59.5 14 0.00047 28.6 5.0 38 14-51 15-55 (134)
97 3s2u_A UDP-N-acetylglucosamine 59.4 22 0.00076 32.8 7.4 26 352-379 92-120 (365)
98 3mcu_A Dipicolinate synthase, 58.8 8.7 0.0003 32.4 3.9 40 13-53 4-44 (207)
99 2lnd_A De novo designed protei 58.8 13 0.00043 25.4 3.9 49 372-421 49-100 (112)
100 3auf_A Glycinamide ribonucleot 57.3 44 0.0015 28.6 8.3 106 12-143 20-132 (229)
101 3gpi_A NAD-dependent epimerase 56.6 13 0.00043 32.9 5.0 34 13-51 2-35 (286)
102 3pdi_B Nitrogenase MOFE cofact 55.2 47 0.0016 31.9 8.9 88 13-140 312-399 (458)
103 3kjh_A CO dehydrogenase/acetyl 54.7 9.1 0.00031 33.0 3.6 38 15-52 1-38 (254)
104 3ezx_A MMCP 1, monomethylamine 54.7 15 0.00051 31.2 4.8 41 11-51 89-129 (215)
105 1qkk_A DCTD, C4-dicarboxylate 54.3 37 0.0013 26.2 7.0 63 373-440 74-136 (155)
106 2ejb_A Probable aromatic acid 52.3 24 0.00083 29.2 5.6 36 15-51 2-37 (189)
107 2hy5_A Putative sulfurtransfer 51.6 20 0.00069 27.4 4.8 37 15-51 1-41 (130)
108 3qvl_A Putative hydantoin race 51.5 65 0.0022 27.8 8.5 94 15-140 2-97 (245)
109 1qzu_A Hypothetical protein MD 51.0 13 0.00044 31.3 3.8 42 11-53 16-58 (206)
110 1hdo_A Biliverdin IX beta redu 50.7 50 0.0017 26.9 7.6 34 14-51 3-36 (206)
111 3eag_A UDP-N-acetylmuramate:L- 50.3 16 0.00054 33.3 4.6 34 13-50 3-36 (326)
112 2q5c_A NTRC family transcripti 50.1 55 0.0019 27.1 7.6 30 352-384 51-80 (196)
113 1u0t_A Inorganic polyphosphate 49.7 18 0.00063 32.6 4.9 32 349-382 72-107 (307)
114 4e21_A 6-phosphogluconate dehy 49.4 12 0.0004 34.8 3.6 43 4-51 12-54 (358)
115 3kcq_A Phosphoribosylglycinami 48.9 49 0.0017 28.0 7.1 101 12-143 6-113 (215)
116 1yt5_A Inorganic polyphosphate 48.7 10 0.00035 33.3 2.9 53 352-422 41-96 (258)
117 4dll_A 2-hydroxy-3-oxopropiona 48.5 20 0.00068 32.5 5.0 34 12-50 29-62 (320)
118 1p9o_A Phosphopantothenoylcyst 48.4 11 0.00036 34.2 3.0 23 30-52 67-89 (313)
119 4gi5_A Quinone reductase; prot 47.9 30 0.001 30.7 5.8 44 7-50 15-61 (280)
120 1p3y_1 MRSD protein; flavoprot 47.7 14 0.00048 30.8 3.4 38 13-51 7-44 (194)
121 1pno_A NAD(P) transhydrogenase 47.7 22 0.00076 28.4 4.3 39 13-51 22-63 (180)
122 3llv_A Exopolyphosphatase-rela 47.7 14 0.00047 28.6 3.3 33 14-51 6-38 (141)
123 3lp6_A Phosphoribosylaminoimid 47.4 1.1E+02 0.0038 24.7 10.2 138 275-441 6-155 (174)
124 2b8t_A Thymidine kinase; deoxy 47.2 1.3E+02 0.0044 25.4 10.2 40 12-52 10-50 (223)
125 3l7i_A Teichoic acid biosynthe 47.2 7 0.00024 40.3 1.8 108 342-460 605-718 (729)
126 1bg6_A N-(1-D-carboxylethyl)-L 47.1 13 0.00044 34.2 3.6 34 12-50 2-35 (359)
127 3to5_A CHEY homolog; alpha(5)b 46.9 80 0.0027 24.1 7.6 54 366-421 74-132 (134)
128 1d4o_A NADP(H) transhydrogenas 46.8 23 0.00079 28.4 4.3 39 13-51 21-62 (184)
129 3of5_A Dethiobiotin synthetase 46.8 20 0.00069 30.6 4.5 38 13-50 2-41 (228)
130 3s40_A Diacylglycerol kinase; 46.2 32 0.0011 30.9 5.9 81 277-382 11-97 (304)
131 3ghy_A Ketopantoate reductase 46.1 12 0.00042 34.2 3.2 34 13-51 2-35 (335)
132 2ew2_A 2-dehydropantoate 2-red 45.5 14 0.00048 33.2 3.4 32 14-50 3-34 (316)
133 1z82_A Glycerol-3-phosphate de 45.5 14 0.0005 33.6 3.6 42 4-50 4-45 (335)
134 1ehi_A LMDDL2, D-alanine:D-lac 45.2 19 0.00067 33.5 4.5 39 13-51 2-45 (377)
135 2bru_C NAD(P) transhydrogenase 44.9 25 0.00086 28.2 4.2 40 13-52 29-71 (186)
136 3q0i_A Methionyl-tRNA formyltr 44.8 35 0.0012 30.9 5.9 36 12-52 5-40 (318)
137 3ew7_A LMO0794 protein; Q8Y8U8 44.8 31 0.001 28.7 5.4 33 15-51 1-33 (221)
138 2fsv_C NAD(P) transhydrogenase 44.5 26 0.00088 28.7 4.3 38 14-51 46-86 (203)
139 1u11_A PURE (N5-carboxyaminoim 44.4 1.3E+02 0.0044 24.5 11.0 139 276-443 21-173 (182)
140 1djl_A Transhydrogenase DIII; 44.0 26 0.0009 28.8 4.3 38 14-51 45-85 (207)
141 2ywr_A Phosphoribosylglycinami 43.9 54 0.0018 27.7 6.6 103 15-143 2-111 (216)
142 3l4b_C TRKA K+ channel protien 43.8 9.5 0.00032 32.3 1.9 32 15-51 1-32 (218)
143 2vqe_B 30S ribosomal protein S 43.8 1.6E+02 0.0055 25.5 11.1 34 112-145 157-192 (256)
144 2r85_A PURP protein PF1517; AT 43.5 21 0.00072 32.3 4.4 32 14-51 2-33 (334)
145 4hb9_A Similarities with proba 43.4 15 0.00052 34.2 3.4 31 14-49 1-31 (412)
146 3dfu_A Uncharacterized protein 43.3 17 0.00057 31.3 3.3 34 12-50 4-37 (232)
147 2l2q_A PTS system, cellobiose- 42.9 25 0.00087 25.9 3.9 38 13-50 3-40 (109)
148 3h2s_A Putative NADH-flavin re 42.7 34 0.0012 28.6 5.4 33 15-51 1-33 (224)
149 3fgn_A Dethiobiotin synthetase 42.4 26 0.00091 30.5 4.5 39 12-50 23-63 (251)
150 1ks9_A KPA reductase;, 2-dehyd 42.3 21 0.00072 31.5 4.1 32 15-51 1-32 (291)
151 4g65_A TRK system potassium up 41.9 7.8 0.00027 37.4 1.1 34 13-51 2-35 (461)
152 2bon_A Lipid kinase; DAG kinas 41.8 38 0.0013 30.8 5.8 78 278-382 33-118 (332)
153 1tvm_A PTS system, galactitol- 41.7 89 0.003 23.1 6.8 43 8-50 15-58 (113)
154 3e8x_A Putative NAD-dependent 41.6 38 0.0013 28.7 5.5 37 11-51 18-54 (236)
155 2d1p_A TUSD, hypothetical UPF0 41.5 40 0.0014 26.2 5.0 38 13-50 11-52 (140)
156 3fwz_A Inner membrane protein 41.4 19 0.00063 27.9 3.1 35 13-52 6-40 (140)
157 1g63_A Epidermin modifying enz 41.0 22 0.00074 29.2 3.5 37 16-53 4-40 (181)
158 2i2c_A Probable inorganic poly 40.2 11 0.00037 33.4 1.7 28 353-382 36-69 (272)
159 2qv7_A Diacylglycerol kinase D 40.0 27 0.00091 31.9 4.4 81 278-382 28-114 (337)
160 1e4e_A Vancomycin/teicoplanin 39.7 21 0.00072 32.7 3.7 39 13-51 2-44 (343)
161 3g79_A NDP-N-acetyl-D-galactos 39.3 27 0.00092 33.8 4.4 37 12-53 16-54 (478)
162 3k96_A Glycerol-3-phosphate de 39.1 20 0.0007 33.1 3.5 35 12-51 27-61 (356)
163 3qjg_A Epidermin biosynthesis 39.1 1.1E+02 0.0039 24.7 7.6 115 276-401 6-143 (175)
164 3doj_A AT3G25530, dehydrogenas 38.9 25 0.00085 31.6 4.0 34 12-50 19-52 (310)
165 3hn2_A 2-dehydropantoate 2-red 38.9 25 0.00086 31.6 4.0 32 15-51 3-34 (312)
166 3l18_A Intracellular protease 38.8 68 0.0023 25.4 6.3 38 13-51 1-38 (168)
167 2bw0_A 10-FTHFDH, 10-formyltet 38.6 52 0.0018 29.9 6.0 36 12-52 20-55 (329)
168 3rfo_A Methionyl-tRNA formyltr 38.5 39 0.0013 30.5 5.2 36 12-52 2-37 (317)
169 1e2b_A Enzyme IIB-cellobiose; 38.4 59 0.002 23.8 5.3 39 13-51 2-40 (106)
170 2raf_A Putative dinucleotide-b 38.2 28 0.00096 29.2 4.0 35 12-51 17-51 (209)
171 3av3_A Phosphoribosylglycinami 38.1 1E+02 0.0035 25.8 7.4 103 15-143 4-113 (212)
172 3l77_A Short-chain alcohol deh 37.9 33 0.0011 29.1 4.5 33 15-50 2-34 (235)
173 3tqr_A Phosphoribosylglycinami 37.9 77 0.0026 26.7 6.6 106 12-143 3-114 (215)
174 2pju_A Propionate catabolism o 37.4 31 0.0011 29.4 4.1 67 353-422 64-153 (225)
175 2x4g_A Nucleoside-diphosphate- 37.3 46 0.0016 30.0 5.6 36 12-51 11-46 (342)
176 3dqp_A Oxidoreductase YLBE; al 37.3 41 0.0014 28.1 4.9 33 15-51 1-33 (219)
177 3bfv_A CAPA1, CAPB2, membrane 37.3 38 0.0013 29.8 4.8 41 12-52 79-121 (271)
178 2c5m_A CTP synthase; cytidine 37.2 24 0.00081 30.7 3.2 41 12-52 20-63 (294)
179 1o4v_A Phosphoribosylaminoimid 37.0 1.7E+02 0.0058 23.8 13.0 139 276-443 13-163 (183)
180 3ic5_A Putative saccharopine d 36.9 29 0.00098 25.4 3.5 33 14-51 5-38 (118)
181 2i87_A D-alanine-D-alanine lig 36.7 18 0.00062 33.4 2.7 39 13-51 2-44 (364)
182 2q5c_A NTRC family transcripti 36.7 52 0.0018 27.3 5.3 47 95-149 129-175 (196)
183 2pzm_A Putative nucleotide sug 36.7 32 0.0011 31.1 4.4 37 10-50 16-52 (330)
184 1jx7_A Hypothetical protein YC 36.6 38 0.0013 24.9 4.2 36 16-51 3-43 (117)
185 1fmt_A Methionyl-tRNA FMet for 36.6 34 0.0012 30.9 4.4 35 13-52 2-36 (314)
186 3i83_A 2-dehydropantoate 2-red 36.4 27 0.00091 31.6 3.8 32 15-51 3-34 (320)
187 1jkx_A GART;, phosphoribosylgl 36.3 1.5E+02 0.0052 24.8 8.2 102 15-143 1-110 (212)
188 3iqw_A Tail-anchored protein t 36.2 32 0.0011 31.4 4.3 42 12-53 13-55 (334)
189 3hwr_A 2-dehydropantoate 2-red 36.2 24 0.00083 31.9 3.5 31 13-48 18-48 (318)
190 1ydh_A AT5G11950; structural g 35.6 1.4E+02 0.0048 25.1 7.9 67 352-420 105-188 (216)
191 2ozl_B PDHE1-B, pyruvate dehyd 35.5 1.7E+02 0.0057 26.6 9.0 110 274-421 215-340 (341)
192 1gsa_A Glutathione synthetase; 35.5 29 0.001 30.9 3.9 37 15-51 2-41 (316)
193 3end_A Light-independent proto 35.3 41 0.0014 30.0 4.9 40 13-52 39-79 (307)
194 3guy_A Short-chain dehydrogena 35.3 29 0.001 29.3 3.7 34 15-51 1-34 (230)
195 3ju3_A Probable 2-oxoacid ferr 35.2 1.4E+02 0.0047 22.2 10.5 30 275-308 13-42 (118)
196 2vrn_A Protease I, DR1199; cys 34.9 87 0.003 25.4 6.5 41 11-52 6-46 (190)
197 2an1_A Putative kinase; struct 34.8 17 0.00057 32.5 2.1 31 350-382 61-95 (292)
198 3sbx_A Putative uncharacterize 34.7 53 0.0018 27.1 5.0 38 12-50 11-52 (189)
199 1u7z_A Coenzyme A biosynthesis 34.7 40 0.0014 28.8 4.3 23 30-52 36-58 (226)
200 3g0o_A 3-hydroxyisobutyrate de 34.7 21 0.00073 31.9 2.8 33 13-50 6-38 (303)
201 3rg8_A Phosphoribosylaminoimid 34.6 1.7E+02 0.0059 23.2 10.8 136 277-441 3-148 (159)
202 1qyd_A Pinoresinol-lariciresin 34.3 37 0.0013 30.2 4.4 34 14-51 4-37 (313)
203 1fjh_A 3alpha-hydroxysteroid d 34.3 45 0.0015 28.6 4.9 33 15-50 1-33 (257)
204 1iow_A DD-ligase, DDLB, D-ALA\ 34.1 52 0.0018 29.1 5.4 38 14-51 2-43 (306)
205 2fb6_A Conserved hypothetical 34.1 41 0.0014 25.2 3.8 38 14-51 7-48 (117)
206 2pn1_A Carbamoylphosphate synt 34.0 50 0.0017 29.7 5.3 34 12-51 2-37 (331)
207 3zzm_A Bifunctional purine bio 34.0 22 0.00076 34.2 2.8 104 12-127 7-115 (523)
208 4hn9_A Iron complex transport 33.8 49 0.0017 30.0 5.2 39 100-143 108-146 (335)
209 1dhr_A Dihydropteridine reduct 33.5 42 0.0014 28.6 4.5 35 14-51 6-40 (241)
210 1jay_A Coenzyme F420H2:NADP+ o 33.3 34 0.0012 28.5 3.8 32 15-50 1-32 (212)
211 3e5n_A D-alanine-D-alanine lig 33.2 27 0.00094 32.6 3.4 43 9-51 17-63 (386)
212 3cky_A 2-hydroxymethyl glutara 33.0 44 0.0015 29.6 4.7 33 13-50 3-35 (301)
213 1ydh_A AT5G11950; structural g 32.9 53 0.0018 27.8 4.8 39 12-50 6-49 (216)
214 4e3z_A Putative oxidoreductase 32.9 46 0.0016 29.0 4.7 38 10-50 21-58 (272)
215 4eg0_A D-alanine--D-alanine li 32.8 62 0.0021 29.0 5.7 37 14-50 13-53 (317)
216 2yvu_A Probable adenylyl-sulfa 32.7 62 0.0021 26.1 5.2 42 10-51 9-50 (186)
217 3i12_A D-alanine-D-alanine lig 32.7 28 0.00097 32.1 3.4 40 12-51 1-44 (364)
218 3c1o_A Eugenol synthase; pheny 32.5 42 0.0014 30.0 4.5 34 14-51 4-37 (321)
219 3lyh_A Cobalamin (vitamin B12) 32.5 93 0.0032 23.3 5.8 37 275-311 5-41 (126)
220 3qvo_A NMRA family protein; st 32.4 90 0.0031 26.3 6.5 35 14-51 22-57 (236)
221 2ph1_A Nucleotide-binding prot 32.3 37 0.0013 29.5 4.0 40 14-53 17-58 (262)
222 1lld_A L-lactate dehydrogenase 32.1 25 0.00084 31.7 2.8 37 10-51 3-41 (319)
223 3sju_A Keto reductase; short-c 32.1 42 0.0014 29.5 4.3 37 11-50 20-56 (279)
224 1sb8_A WBPP; epimerase, 4-epim 32.0 44 0.0015 30.4 4.6 40 7-50 20-59 (352)
225 3ius_A Uncharacterized conserv 32.0 41 0.0014 29.4 4.2 32 15-51 6-37 (286)
226 4gbj_A 6-phosphogluconate dehy 31.9 42 0.0014 30.0 4.3 30 16-50 7-36 (297)
227 3ko8_A NAD-dependent epimerase 31.8 97 0.0033 27.3 6.8 33 15-51 1-33 (312)
228 3nbm_A PTS system, lactose-spe 31.7 44 0.0015 24.7 3.6 40 11-50 3-42 (108)
229 3t6k_A Response regulator rece 31.7 1.5E+02 0.0052 21.9 7.1 47 374-422 78-124 (136)
230 3m6m_D Sensory/regulatory prot 31.7 61 0.0021 24.6 4.8 45 1-49 1-45 (143)
231 2jk1_A HUPR, hydrogenase trans 31.5 1.1E+02 0.0037 22.8 6.2 48 374-422 72-119 (139)
232 3gl9_A Response regulator; bet 31.5 1.5E+02 0.005 21.4 7.8 47 373-421 75-121 (122)
233 3lrx_A Putative hydrogenase; a 31.5 45 0.0015 26.4 4.0 37 14-53 23-59 (158)
234 3d7l_A LIN1944 protein; APC893 31.4 70 0.0024 26.1 5.4 34 13-51 2-35 (202)
235 3rkr_A Short chain oxidoreduct 31.3 54 0.0019 28.3 4.9 33 15-50 29-61 (262)
236 3hly_A Flavodoxin-like domain; 31.3 61 0.0021 25.6 4.8 36 15-50 1-37 (161)
237 1zmt_A Haloalcohol dehalogenas 31.3 42 0.0014 28.9 4.1 33 15-50 1-33 (254)
238 2a33_A Hypothetical protein; s 31.3 58 0.002 27.5 4.8 37 13-49 11-52 (215)
239 2w36_A Endonuclease V; hypoxan 31.2 74 0.0025 27.0 5.3 32 112-143 102-140 (225)
240 1txg_A Glycerol-3-phosphate de 31.1 26 0.0009 31.7 2.8 31 15-50 1-31 (335)
241 1evy_A Glycerol-3-phosphate de 31.0 26 0.0009 32.3 2.9 32 15-51 15-47 (366)
242 1mv8_A GMD, GDP-mannose 6-dehy 31.0 45 0.0015 31.7 4.5 31 15-50 1-31 (436)
243 3tqq_A Methionyl-tRNA formyltr 30.9 46 0.0016 30.0 4.3 35 14-53 2-36 (314)
244 4id9_A Short-chain dehydrogena 30.5 49 0.0017 29.9 4.6 36 12-51 17-52 (347)
245 3ego_A Probable 2-dehydropanto 30.4 30 0.001 31.1 3.0 32 14-51 2-33 (307)
246 2a5l_A Trp repressor binding p 30.3 64 0.0022 26.4 4.9 37 14-50 5-42 (200)
247 3kkl_A Probable chaperone prot 30.3 83 0.0029 27.1 5.8 38 14-51 3-51 (244)
248 3qsg_A NAD-binding phosphogluc 30.3 27 0.00093 31.5 2.7 34 12-50 22-56 (312)
249 3dtt_A NADP oxidoreductase; st 30.2 45 0.0015 28.7 4.0 36 11-51 16-51 (245)
250 3c85_A Putative glutathione-re 30.1 34 0.0012 27.7 3.1 35 12-51 37-72 (183)
251 2xj4_A MIPZ; replication, cell 30.0 57 0.002 28.7 4.8 38 15-52 4-43 (286)
252 4e5s_A MCCFLIKE protein (BA_56 30.0 80 0.0027 28.7 5.8 73 289-382 62-136 (331)
253 2qyt_A 2-dehydropantoate 2-red 30.0 24 0.00084 31.6 2.4 32 14-50 8-45 (317)
254 3k9g_A PF-32 protein; ssgcid, 29.8 53 0.0018 28.4 4.5 40 12-52 24-65 (267)
255 3f6r_A Flavodoxin; FMN binding 29.6 56 0.0019 25.2 4.2 37 15-51 2-39 (148)
256 2h78_A Hibadh, 3-hydroxyisobut 29.6 42 0.0014 29.9 3.9 32 14-50 3-34 (302)
257 2dkn_A 3-alpha-hydroxysteroid 29.6 58 0.002 27.7 4.8 33 15-50 1-33 (255)
258 3pef_A 6-phosphogluconate dehy 29.6 38 0.0013 29.9 3.6 31 15-50 2-32 (287)
259 1wcv_1 SOJ, segregation protei 29.5 42 0.0014 29.0 3.8 40 13-52 4-45 (257)
260 3bul_A Methionine synthase; tr 29.4 54 0.0018 32.4 4.8 40 12-51 96-135 (579)
261 4huj_A Uncharacterized protein 29.3 22 0.00076 30.1 1.9 34 12-50 21-54 (220)
262 3r5x_A D-alanine--D-alanine li 29.3 31 0.0011 30.8 3.0 39 13-51 2-44 (307)
263 3f67_A Putative dienelactone h 29.1 69 0.0024 26.5 5.1 37 14-50 31-67 (241)
264 2gas_A Isoflavone reductase; N 28.9 44 0.0015 29.6 3.9 33 15-51 3-35 (307)
265 3md9_A Hemin-binding periplasm 28.8 50 0.0017 28.4 4.1 37 100-141 51-89 (255)
266 3ea0_A ATPase, para family; al 28.8 44 0.0015 28.4 3.8 41 13-53 2-45 (245)
267 3ia7_A CALG4; glycosysltransfe 28.5 1.1E+02 0.0037 28.1 6.7 35 277-313 6-40 (402)
268 3dhn_A NAD-dependent epimerase 28.5 43 0.0015 28.0 3.6 33 15-51 5-37 (227)
269 3i6i_A Putative leucoanthocyan 28.2 60 0.002 29.4 4.8 36 12-51 8-43 (346)
270 2a33_A Hypothetical protein; s 28.0 1.1E+02 0.0037 25.8 5.8 76 341-418 96-190 (215)
271 3qha_A Putative oxidoreductase 27.9 53 0.0018 29.2 4.2 33 14-51 15-47 (296)
272 2q62_A ARSH; alpha/beta, flavo 27.9 77 0.0026 27.4 5.1 41 10-50 30-73 (247)
273 2zki_A 199AA long hypothetical 27.9 58 0.002 26.7 4.3 36 14-50 4-40 (199)
274 2hmt_A YUAA protein; RCK, KTN, 27.9 35 0.0012 26.0 2.7 32 15-51 7-38 (144)
275 2etv_A Iron(III) ABC transport 27.7 42 0.0015 30.6 3.6 38 100-142 88-126 (346)
276 4ezb_A Uncharacterized conserv 27.6 40 0.0014 30.4 3.4 33 14-51 24-57 (317)
277 3kcn_A Adenylate cyclase homol 27.6 1.3E+02 0.0044 22.8 6.1 48 373-422 75-123 (151)
278 2gf2_A Hibadh, 3-hydroxyisobut 27.6 42 0.0014 29.7 3.5 31 15-50 1-31 (296)
279 1f4p_A Flavodoxin; electron tr 27.5 50 0.0017 25.4 3.6 36 15-50 1-37 (147)
280 1o5i_A 3-oxoacyl-(acyl carrier 27.5 72 0.0025 27.3 4.9 34 14-50 18-51 (249)
281 2qs7_A Uncharacterized protein 27.4 77 0.0026 24.6 4.6 35 17-51 11-45 (144)
282 2rir_A Dipicolinate synthase, 27.3 86 0.0029 27.8 5.5 34 11-49 4-37 (300)
283 1yb4_A Tartronic semialdehyde 27.2 44 0.0015 29.5 3.6 31 14-49 3-33 (295)
284 1t1j_A Hypothetical protein; s 27.1 88 0.003 23.8 4.6 33 14-46 7-47 (125)
285 3qrx_B Melittin; calcium-bindi 27.0 20 0.00069 18.1 0.7 17 363-379 1-17 (26)
286 2vns_A Metalloreductase steap3 26.9 43 0.0015 28.1 3.2 33 13-50 27-59 (215)
287 3foj_A Uncharacterized protein 26.9 1.7E+02 0.0057 20.6 6.3 35 12-50 54-88 (100)
288 2r6j_A Eugenol synthase 1; phe 26.9 61 0.0021 28.9 4.5 32 16-51 13-44 (318)
289 2z1m_A GDP-D-mannose dehydrata 26.8 78 0.0027 28.4 5.3 35 13-51 2-36 (345)
290 1f0y_A HCDH, L-3-hydroxyacyl-C 26.7 40 0.0014 30.0 3.2 32 14-50 15-46 (302)
291 4e5v_A Putative THUA-like prot 26.7 74 0.0025 28.1 4.8 39 12-51 2-43 (281)
292 1udb_A Epimerase, UDP-galactos 26.5 64 0.0022 29.0 4.6 32 15-50 1-32 (338)
293 2khz_A C-MYC-responsive protei 26.5 1.5E+02 0.0052 23.5 6.3 125 275-421 10-150 (165)
294 2x5n_A SPRPN10, 26S proteasome 26.5 1.3E+02 0.0043 24.7 6.0 38 14-51 106-144 (192)
295 2c5a_A GDP-mannose-3', 5'-epim 26.4 1.7E+02 0.0057 26.8 7.6 34 14-51 29-62 (379)
296 2bi7_A UDP-galactopyranose mut 26.3 80 0.0027 29.3 5.3 34 13-51 2-35 (384)
297 2f1k_A Prephenate dehydrogenas 26.2 50 0.0017 28.9 3.7 31 15-50 1-31 (279)
298 2pk3_A GDP-6-deoxy-D-LYXO-4-he 26.2 53 0.0018 29.2 4.0 36 13-51 10-45 (321)
299 1eiw_A Hypothetical protein MT 26.1 56 0.0019 24.3 3.3 65 350-421 36-109 (111)
300 2lpm_A Two-component response 26.1 44 0.0015 25.2 2.9 41 96-141 41-86 (123)
301 3obb_A Probable 3-hydroxyisobu 26.1 67 0.0023 28.7 4.5 29 16-49 5-33 (300)
302 4b79_A PA4098, probable short- 26.1 1.8E+02 0.0061 24.9 7.1 35 14-51 10-44 (242)
303 1uzm_A 3-oxoacyl-[acyl-carrier 26.0 88 0.003 26.7 5.2 33 15-50 15-47 (247)
304 2a3d_A Protein (de novo three- 26.0 98 0.0033 19.4 3.8 31 425-459 4-34 (73)
305 3enk_A UDP-glucose 4-epimerase 25.9 66 0.0023 28.9 4.6 33 14-50 5-37 (341)
306 2y0c_A BCEC, UDP-glucose dehyd 25.8 44 0.0015 32.3 3.4 35 12-51 6-40 (478)
307 3f9i_A 3-oxoacyl-[acyl-carrier 25.8 88 0.003 26.6 5.2 38 10-50 9-46 (249)
308 3l6d_A Putative oxidoreductase 25.7 35 0.0012 30.6 2.6 34 12-50 7-40 (306)
309 3gg2_A Sugar dehydrogenase, UD 25.6 45 0.0015 31.9 3.4 32 15-51 3-34 (450)
310 3lyu_A Putative hydrogenase; t 25.4 60 0.0021 25.1 3.6 35 14-51 18-52 (142)
311 1u9c_A APC35852; structural ge 25.4 1.2E+02 0.0041 25.4 5.9 37 16-52 7-52 (224)
312 1y1p_A ARII, aldehyde reductas 25.3 1.1E+02 0.0038 27.3 6.0 36 11-50 8-43 (342)
313 4ao6_A Esterase; hydrolase, th 25.3 64 0.0022 27.7 4.2 38 13-50 54-93 (259)
314 1li5_A Cysrs, cysteinyl-tRNA s 25.2 53 0.0018 31.5 3.8 26 25-50 38-66 (461)
315 4g6h_A Rotenone-insensitive NA 25.1 36 0.0012 33.1 2.7 36 11-51 39-74 (502)
316 4hcj_A THIJ/PFPI domain protei 25.1 1.2E+02 0.0043 24.4 5.6 39 12-51 5-44 (177)
317 1qo0_D AMIR; binding protein, 25.0 2.4E+02 0.0082 22.5 7.6 54 367-422 69-125 (196)
318 1xgk_A Nitrogen metabolite rep 25.0 66 0.0022 29.4 4.4 34 14-51 5-38 (352)
319 1oi4_A Hypothetical protein YH 25.0 1.5E+02 0.0053 24.1 6.3 40 12-52 21-60 (193)
320 2q8p_A Iron-regulated surface 24.9 63 0.0022 27.8 4.1 39 100-143 52-91 (260)
321 4dim_A Phosphoribosylglycinami 24.8 66 0.0022 29.9 4.5 34 12-50 5-38 (403)
322 1zi8_A Carboxymethylenebutenol 24.7 90 0.0031 25.7 5.0 37 14-50 27-63 (236)
323 3ruf_A WBGU; rossmann fold, UD 24.6 68 0.0023 29.0 4.4 36 12-51 23-58 (351)
324 3r6d_A NAD-dependent epimerase 24.6 87 0.003 26.0 4.8 34 15-51 5-39 (221)
325 4iin_A 3-ketoacyl-acyl carrier 24.6 94 0.0032 26.9 5.2 34 14-50 28-61 (271)
326 2ywx_A Phosphoribosylaminoimid 24.6 2.6E+02 0.009 22.1 12.2 129 279-441 2-143 (157)
327 1rpn_A GDP-mannose 4,6-dehydra 24.6 93 0.0032 27.8 5.4 36 12-51 12-47 (335)
328 4e12_A Diketoreductase; oxidor 24.4 59 0.002 28.6 3.8 33 13-50 3-35 (283)
329 3q9l_A Septum site-determining 24.3 79 0.0027 27.0 4.6 37 16-52 3-41 (260)
330 4hv4_A UDP-N-acetylmuramate--L 24.3 83 0.0028 30.4 5.1 34 13-50 21-54 (494)
331 1i36_A Conserved hypothetical 24.3 38 0.0013 29.4 2.5 29 15-48 1-29 (264)
332 3hn7_A UDP-N-acetylmuramate-L- 24.3 65 0.0022 31.5 4.4 34 13-50 18-51 (524)
333 4fbl_A LIPS lipolytic enzyme; 24.2 45 0.0015 29.1 3.0 32 18-49 54-85 (281)
334 3rp8_A Flavoprotein monooxygen 24.2 51 0.0018 30.7 3.6 38 8-50 17-54 (407)
335 4h1h_A LMO1638 protein; MCCF-l 24.1 1.1E+02 0.0038 27.7 5.6 72 290-382 63-136 (327)
336 3fkq_A NTRC-like two-domain pr 24.1 70 0.0024 29.5 4.4 40 12-51 140-181 (373)
337 3lqk_A Dipicolinate synthase s 24.1 3.1E+02 0.01 22.7 10.6 142 275-422 7-186 (201)
338 3g17_A Similar to 2-dehydropan 24.0 21 0.00073 31.8 0.8 32 15-51 3-34 (294)
339 2r7a_A Bacterial heme binding 23.9 69 0.0024 27.5 4.1 37 100-141 51-89 (256)
340 1ooe_A Dihydropteridine reduct 23.8 82 0.0028 26.5 4.6 33 16-51 4-36 (236)
341 3k3p_A D-alanine--D-alanine li 23.8 48 0.0017 30.9 3.2 42 10-51 33-78 (383)
342 1ydg_A Trp repressor binding p 23.8 1E+02 0.0035 25.4 5.1 38 13-50 5-43 (211)
343 1rw7_A YDR533CP; alpha-beta sa 23.7 1.5E+02 0.0053 25.2 6.3 38 15-52 4-52 (243)
344 2nwq_A Probable short-chain de 23.7 74 0.0025 27.7 4.3 32 16-50 22-53 (272)
345 3tem_A Ribosyldihydronicotinam 23.7 97 0.0033 26.3 4.9 37 14-50 1-40 (228)
346 3grc_A Sensor protein, kinase; 23.7 1.4E+02 0.0049 22.0 5.6 49 373-422 79-127 (140)
347 3oh8_A Nucleoside-diphosphate 23.6 1E+02 0.0034 29.9 5.6 34 14-51 147-180 (516)
348 2wtm_A EST1E; hydrolase; 1.60A 23.6 1E+02 0.0035 25.9 5.3 37 14-50 26-64 (251)
349 3dkr_A Esterase D; alpha beta 23.6 68 0.0023 26.5 4.0 37 14-50 21-57 (251)
350 3h1g_A Chemotaxis protein CHEY 23.5 2.1E+02 0.0073 20.7 8.3 55 366-422 68-127 (129)
351 3pdu_A 3-hydroxyisobutyrate de 23.5 51 0.0017 29.1 3.2 31 15-50 2-32 (287)
352 3ors_A N5-carboxyaminoimidazol 23.5 2.8E+02 0.0096 22.1 11.1 137 276-441 3-153 (163)
353 3psh_A Protein HI_1472; substr 23.4 75 0.0026 28.5 4.4 39 100-143 76-115 (326)
354 1wma_A Carbonyl reductase [NAD 23.4 89 0.0031 26.8 4.8 35 14-51 3-38 (276)
355 2q1w_A Putative nucleotide sug 23.3 1.1E+02 0.0036 27.5 5.5 36 12-51 19-54 (333)
356 2zyd_A 6-phosphogluconate dehy 23.3 42 0.0014 32.5 2.7 36 10-50 11-46 (480)
357 2izz_A Pyrroline-5-carboxylate 23.2 33 0.0011 31.0 1.9 41 5-50 13-57 (322)
358 3o26_A Salutaridine reductase; 23.2 81 0.0028 27.8 4.6 36 13-51 10-45 (311)
359 2pju_A Propionate catabolism o 23.1 63 0.0022 27.5 3.5 39 96-142 142-180 (225)
360 3l6e_A Oxidoreductase, short-c 23.1 81 0.0028 26.7 4.4 33 15-50 3-35 (235)
361 4fu0_A D-alanine--D-alanine li 22.9 54 0.0019 30.1 3.4 40 12-51 1-44 (357)
362 3slg_A PBGP3 protein; structur 22.9 89 0.003 28.5 4.9 37 11-51 21-58 (372)
363 3pfb_A Cinnamoyl esterase; alp 22.9 1.1E+02 0.0037 25.8 5.3 36 15-50 46-83 (270)
364 3ahc_A Phosphoketolase, xylulo 22.8 6.6E+02 0.022 26.1 13.4 82 358-448 727-813 (845)
365 3icc_A Putative 3-oxoacyl-(acy 22.8 1.1E+02 0.0036 26.1 5.1 34 14-50 6-39 (255)
366 3kbq_A Protein TA0487; structu 22.8 1.3E+02 0.0044 24.3 5.1 82 278-382 6-97 (172)
367 3pg5_A Uncharacterized protein 22.8 65 0.0022 29.6 3.9 39 15-53 1-41 (361)
368 1vpd_A Tartronate semialdehyde 22.7 91 0.0031 27.4 4.8 31 15-50 6-36 (299)
369 4egf_A L-xylulose reductase; s 22.7 92 0.0031 26.9 4.7 34 14-50 19-52 (266)
370 4gwg_A 6-phosphogluconate dehy 22.7 47 0.0016 32.1 2.9 34 12-50 2-35 (484)
371 3ppi_A 3-hydroxyacyl-COA dehyd 22.6 98 0.0033 26.9 4.9 34 14-50 29-62 (281)
372 3osu_A 3-oxoacyl-[acyl-carrier 22.6 1.1E+02 0.0036 26.1 5.0 33 15-50 4-36 (246)
373 3pid_A UDP-glucose 6-dehydroge 22.6 59 0.002 30.9 3.5 36 10-51 32-67 (432)
374 3u7q_B Nitrogenase molybdenum- 22.5 5.3E+02 0.018 24.9 11.8 34 13-51 363-396 (523)
375 1n2z_A Vitamin B12 transport p 22.5 1E+02 0.0035 26.1 5.0 38 100-142 49-88 (245)
376 1xv5_A AGT, DNA alpha-glucosyl 22.5 1E+02 0.0035 25.6 4.4 37 15-51 2-41 (401)
377 2xdo_A TETX2 protein; tetracyc 22.4 65 0.0022 29.9 3.9 36 11-51 23-58 (398)
378 2gdz_A NAD+-dependent 15-hydro 22.4 1.1E+02 0.0037 26.4 5.1 32 16-50 8-39 (267)
379 2uyy_A N-PAC protein; long-cha 22.3 59 0.002 29.1 3.5 33 13-50 29-61 (316)
380 3imf_A Short chain dehydrogena 22.3 95 0.0032 26.6 4.7 34 15-51 6-39 (257)
381 1cp2_A CP2, nitrogenase iron p 22.2 83 0.0028 27.1 4.3 37 17-53 4-40 (269)
382 2iz1_A 6-phosphogluconate dehy 22.2 50 0.0017 31.8 3.1 34 12-50 3-36 (474)
383 2rcy_A Pyrroline carboxylate r 22.1 39 0.0013 29.3 2.1 33 13-50 3-39 (262)
384 3h7a_A Short chain dehydrogena 22.0 92 0.0032 26.7 4.6 34 14-50 6-39 (252)
385 3sr3_A Microcin immunity prote 21.9 1.3E+02 0.0044 27.4 5.6 74 289-383 63-138 (336)
386 1qgu_B Protein (nitrogenase mo 21.9 5.5E+02 0.019 24.8 10.8 34 13-51 359-392 (519)
387 3i4f_A 3-oxoacyl-[acyl-carrier 21.8 1.1E+02 0.0039 26.1 5.2 34 14-50 6-39 (264)
388 4f0j_A Probable hydrolytic enz 21.8 79 0.0027 27.3 4.2 37 15-51 46-82 (315)
389 1imj_A CIB, CCG1-interacting f 21.8 1.6E+02 0.0054 23.5 5.9 37 14-50 31-69 (210)
390 3afo_A NADH kinase POS5; alpha 21.7 40 0.0014 31.5 2.1 35 346-382 108-147 (388)
391 3oid_A Enoyl-[acyl-carrier-pro 21.7 1.1E+02 0.0037 26.3 5.0 34 14-50 3-36 (258)
392 3czc_A RMPB; alpha/beta sandwi 21.7 91 0.0031 22.9 3.8 38 12-49 16-55 (110)
393 3vps_A TUNA, NAD-dependent epi 21.7 1.1E+02 0.0037 27.0 5.1 34 14-51 7-40 (321)
394 1mio_B Nitrogenase molybdenum 21.7 5.1E+02 0.018 24.4 10.2 90 13-140 311-409 (458)
395 1vl0_A DTDP-4-dehydrorhamnose 21.7 46 0.0016 29.2 2.6 35 12-50 10-44 (292)
396 1mio_A Nitrogenase molybdenum 21.6 4.1E+02 0.014 25.8 9.5 35 13-52 334-368 (533)
397 2ahr_A Putative pyrroline carb 21.6 62 0.0021 27.9 3.4 32 14-50 3-34 (259)
398 3dqz_A Alpha-hydroxynitrIle ly 21.5 52 0.0018 27.6 2.8 35 16-50 5-39 (258)
399 3ka7_A Oxidoreductase; structu 21.5 56 0.0019 30.5 3.2 31 15-50 1-31 (425)
400 1ta9_A Glycerol dehydrogenase; 21.4 1.3E+02 0.0043 28.7 5.7 92 266-383 82-178 (450)
401 3qua_A Putative uncharacterize 21.4 1.3E+02 0.0046 24.9 5.1 38 12-50 20-61 (199)
402 2r79_A Periplasmic binding pro 21.4 88 0.003 27.4 4.4 37 100-141 51-89 (283)
403 1zl0_A Hypothetical protein PA 21.3 1.7E+02 0.0057 26.3 6.1 74 289-383 64-139 (311)
404 3nva_A CTP synthase; rossman f 21.3 98 0.0033 30.1 4.7 40 14-53 2-44 (535)
405 3vtz_A Glucose 1-dehydrogenase 21.3 1.2E+02 0.0039 26.4 5.1 37 12-51 11-47 (269)
406 3eme_A Rhodanese-like domain p 21.3 1.4E+02 0.0048 21.1 4.8 35 12-50 54-88 (103)
407 1vl8_A Gluconate 5-dehydrogena 21.2 1.1E+02 0.0037 26.5 4.9 34 14-50 20-53 (267)
408 2ph3_A 3-oxoacyl-[acyl carrier 21.2 1.1E+02 0.0037 25.8 4.8 32 15-49 1-32 (245)
409 1e7w_A Pteridine reductase; di 21.2 1E+02 0.0034 27.1 4.7 32 15-49 9-40 (291)
410 3m2p_A UDP-N-acetylglucosamine 21.2 1.3E+02 0.0043 26.6 5.5 33 15-51 3-35 (311)
411 3v2h_A D-beta-hydroxybutyrate 21.1 89 0.003 27.3 4.3 34 14-50 24-57 (281)
412 1e6u_A GDP-fucose synthetase; 21.1 85 0.0029 27.8 4.3 34 13-50 2-35 (321)
413 2b69_A UDP-glucuronate decarbo 21.0 1.3E+02 0.0043 27.1 5.5 35 12-50 25-59 (343)
414 3ox4_A Alcohol dehydrogenase 2 21.0 59 0.002 30.3 3.2 43 266-310 22-64 (383)
415 3l9w_A Glutathione-regulated p 21.0 60 0.002 30.6 3.2 34 13-51 3-36 (413)
416 2q3e_A UDP-glucose 6-dehydroge 20.9 81 0.0028 30.2 4.3 32 14-50 5-38 (467)
417 2rk3_A Protein DJ-1; parkinson 20.8 2.4E+02 0.0081 22.9 6.7 38 14-52 3-40 (197)
418 4h1h_A LMO1638 protein; MCCF-l 20.7 1.4E+02 0.0049 26.9 5.7 79 275-367 12-92 (327)
419 3n7t_A Macrophage binding prot 20.6 1.7E+02 0.0058 25.1 5.9 37 15-51 10-57 (247)
420 3ucx_A Short chain dehydrogena 20.6 1.1E+02 0.0039 26.3 4.9 34 14-50 10-43 (264)
421 3ezl_A Acetoacetyl-COA reducta 20.6 1.1E+02 0.0036 26.2 4.7 37 11-50 9-45 (256)
422 3sty_A Methylketone synthase 1 20.6 83 0.0028 26.4 4.0 35 16-50 13-47 (267)
423 2qk4_A Trifunctional purine bi 20.6 4.6E+02 0.016 24.5 9.6 32 14-50 24-56 (452)
424 2dpo_A L-gulonate 3-dehydrogen 20.6 65 0.0022 29.1 3.3 34 12-50 4-37 (319)
425 4h15_A Short chain alcohol deh 20.5 1.1E+02 0.0039 26.5 4.8 34 14-50 10-43 (261)
426 3orf_A Dihydropteridine reduct 20.5 98 0.0034 26.4 4.4 34 15-51 22-55 (251)
427 2bon_A Lipid kinase; DAG kinas 20.5 1E+02 0.0034 27.9 4.6 37 15-51 30-66 (332)
428 2o6l_A UDP-glucuronosyltransfe 20.5 2.9E+02 0.01 21.3 7.1 38 14-51 20-60 (170)
429 3m1a_A Putative dehydrogenase; 20.4 1.1E+02 0.0037 26.6 4.7 35 14-51 4-38 (281)
430 3b6i_A Flavoprotein WRBA; flav 20.4 1.2E+02 0.0041 24.6 4.8 36 15-50 2-39 (198)
431 2zat_A Dehydrogenase/reductase 20.4 1.4E+02 0.0048 25.5 5.4 32 16-50 15-46 (260)
432 1mxh_A Pteridine reductase 2; 20.3 1E+02 0.0036 26.6 4.6 32 16-50 12-43 (276)
433 2p5y_A UDP-glucose 4-epimerase 20.3 1.2E+02 0.0041 26.7 5.1 32 15-50 1-32 (311)
434 2gkg_A Response regulator homo 20.3 87 0.003 22.6 3.6 47 373-422 79-125 (127)
435 2a87_A TRXR, TR, thioredoxin r 20.3 47 0.0016 29.9 2.4 37 9-50 9-45 (335)
436 1weh_A Conserved hypothetical 20.3 1.1E+02 0.0039 24.5 4.4 35 16-50 3-41 (171)
437 3lk7_A UDP-N-acetylmuramoylala 20.1 1E+02 0.0035 29.3 4.8 34 12-50 7-40 (451)
438 3c24_A Putative oxidoreductase 20.1 70 0.0024 28.1 3.4 31 15-50 12-43 (286)
439 3nrn_A Uncharacterized protein 20.0 67 0.0023 30.0 3.5 31 15-50 1-31 (421)
440 3uhj_A Probable glycerol dehyd 20.0 63 0.0022 30.1 3.2 90 267-383 45-139 (387)
441 2d1p_B TUSC, hypothetical UPF0 20.0 1.8E+02 0.0062 21.5 5.3 35 17-51 5-41 (119)
442 1t35_A Hypothetical protein YV 20.0 1.1E+02 0.0037 25.2 4.3 34 16-49 3-40 (191)
443 1xq6_A Unknown protein; struct 20.0 1.7E+02 0.0057 24.5 5.9 35 13-51 3-39 (253)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.2e-69 Score=529.78 Aligned_cols=437 Identities=27% Similarity=0.474 Sum_probs=357.7
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC-----CCCCCceEEeCCCCCCCcccccccH
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKG--FSITIIHTNFNSPNP-----SNYPHFSFNSISESLWESEVSTENA 82 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (463)
.+.++.||+++|+|++||++|++.||+.|+++| +.|||++++.+.... ...++++|+.+|++++++.+...+.
T Consensus 9 ~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~ 88 (454)
T 3hbf_A 9 NGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGNP 88 (454)
T ss_dssp ---CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSCT
T ss_pred cCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCCh
Confidence 345688999999999999999999999999999 999999986332111 1125799999999988876554444
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcc
Q 012474 83 ISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGY 162 (463)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 162 (463)
...+..+.+.+...+++.++++.+..+ .++|+||+|.++.|+..+|+++|||++.+++++++.++.+.+.+.......
T Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 89 REPIFLFIKAMQENFKHVIDEAVAETG--KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 444445555555567777776643221 579999999999999999999999999999999999988887665443311
Q ss_pred ccccccCCCCCCCccccCCCCCCCcCCCCcccc-CCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhcCCCC
Q 012474 163 LAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVT-HDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIP 241 (463)
Q Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~ 241 (463)
.... ........+++++.+...+++.... +....+.+.+.+..+...+++.+++||+++||++.++.+++.+ ++
T Consensus 167 ~~~~----~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~ 241 (454)
T 3hbf_A 167 SKEV----HDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KL 241 (454)
T ss_dssp HHHH----TTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SC
T ss_pred CCcc----ccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CC
Confidence 1111 0111123467777888888886543 4455677788888888889999999999999999888888755 57
Q ss_pred ccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCc
Q 012474 242 MFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVE 321 (463)
Q Consensus 242 v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~ 321 (463)
+++|||++...+. ...+.+.++.+||+.++++++|||||||....+.+.+.+++.+|+..++++||+++...
T Consensus 242 v~~vGPl~~~~~~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~----- 313 (454)
T 3hbf_A 242 LLNVGPFNLTTPQ---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP----- 313 (454)
T ss_dssp EEECCCHHHHSCC---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH-----
T ss_pred EEEECCccccccc---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc-----
Confidence 9999999875442 22333456899999888899999999999998889999999999999999999998653
Q ss_pred cCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhcee
Q 012474 322 WLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGL 401 (463)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~ 401 (463)
.+.+|+++.++.++|+++++|+||.++|+|+++++||||||+||+.||+++|||+|++|+++||+.||+++++.+|+|+
T Consensus 314 -~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv 392 (454)
T 3hbf_A 314 -KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGV 392 (454)
T ss_dssp -HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEE
T ss_pred -hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeE
Confidence 2347889988999999999999999999999988899999999999999999999999999999999999998459999
Q ss_pred ecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 402 HLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 402 ~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
.++. .++.++|.++|+++|+++++++||++|+++++.+++++.+|||+.+.++++++.|.+
T Consensus 393 ~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 393 GVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp ECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred EecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 9988 899999999999999985566899999999999999999999999999999999863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.3e-64 Score=504.79 Aligned_cols=447 Identities=32% Similarity=0.654 Sum_probs=343.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---------CCCceEEeCCCCCCCcc---ccc
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN---------YPHFSFNSISESLWESE---VST 79 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~---~~~ 79 (463)
++++||+++|+|+.||++|++.||++|++|||+|||++++.+.....+ .++++|+.+++++++.. ...
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 456899999999999999999999999999999999998744221111 14899999997766521 112
Q ss_pred ccHHHHHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHH
Q 012474 80 ENAISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLE 159 (463)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 159 (463)
.+...++..+...|...++++++.+....+. .++|+||+|.+..|+..+|+++|||++.++++++..+....+.+.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~-~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 164 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNV-PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVE 164 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSS-CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccC-CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHh
Confidence 3444455555466777777788777532000 579999999999999999999999999999999887776666666666
Q ss_pred hcccccc-ccCCCC---CCCccccCCCCCCCcCCCCcccc--CCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHH
Q 012474 160 KGYLAEQ-VSFSSD---SQLEKPVTELPPLRVKDIPIIVT--HDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTR 233 (463)
Q Consensus 160 ~~~~p~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~ 233 (463)
.++.|.. ..+... ......+++++.++..+++.... .....+.+.+....+...+++.+++||+++||++.++.
T Consensus 165 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 165 RGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred cCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 7777765 222211 11112234444455555553322 12344556666667777889999999999999998888
Q ss_pred hhhcCCCCcccccccccc-cccc------C--CCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcC
Q 012474 234 LHKDFPIPMFPIGPFHKY-CLAS------S--SSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS 304 (463)
Q Consensus 234 ~~~~~~~~v~~vGpl~~~-~~~~------~--~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~ 304 (463)
+++.+ +++++|||++.. .... . ...++.+.++.+||+.++++++|||||||....+.+.+..++.+|++.
T Consensus 245 ~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 323 (482)
T 2pq6_A 245 LSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANC 323 (482)
T ss_dssp HHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 88876 679999999864 2110 0 011234456899999887889999999999887888899999999999
Q ss_pred CCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceecccccc
Q 012474 305 RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFG 384 (463)
Q Consensus 305 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~ 384 (463)
++++||+++.....+. ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+++
T Consensus 324 ~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~ 401 (482)
T 2pq6_A 324 KKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 401 (482)
T ss_dssp TCEEEEECCGGGSTTT--GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CCcEEEEEcCCccccc--cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCccc
Confidence 9999999975421110 12278888888899999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHH-HHhhceeecCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhcC
Q 012474 385 DQLVNARYVS-HVWRVGLHLERKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILSF 463 (463)
Q Consensus 385 DQ~~na~rv~-~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (463)
||+.||++++ + +|+|+.++..++.++|.++|+++|+|+++++||++|+++++.+++|+.+|||+.+++++|++.+.++
T Consensus 402 dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 402 DQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp THHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 9999999997 7 6999999867999999999999999854447999999999999999999999999999999998653
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.7e-61 Score=480.67 Aligned_cols=439 Identities=26% Similarity=0.399 Sum_probs=326.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCC--CCCCCC-----CCCceEEeCCCCCCCcccccccHH
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSK-GFSITIIHTNFN--SPNPSN-----YPHFSFNSISESLWESEVSTENAI 83 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~--~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~ 83 (463)
.+++||+++|+|+.||++|+++||++|++| ||+|||++++.+ .....+ ..+++|+.++....+......+..
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRIE 83 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCCHH
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCchhHH
Confidence 456899999999999999999999999998 999999999763 221111 258999999864222111112333
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhCCCCCCCc-eEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcc
Q 012474 84 SLLTVLNDKCVVPFQDCLAKLISNGDQEEPV-TCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGY 162 (463)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~p-D~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 162 (463)
..+......+...+.++++++... .++ |+||+|.+..|+..+|+++|||++.++++++..+..+.+.+.......
T Consensus 84 ~~~~~~~~~~~~~l~~ll~~~~~~----~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (480)
T 2vch_A 84 SRISLTVTRSNPELRKVFDSFVEG----GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVS 159 (480)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHT----TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhhHHHHHHHHHhccC----CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCC
Confidence 333333345556666777666421 468 999999998889999999999999999999887777666554433221
Q ss_pred ccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhcC--CC
Q 012474 163 LAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDF--PI 240 (463)
Q Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~--~~ 240 (463)
.+.. .......++++..+...+++.....+....+..+.+....+.+.+.+++|++.++|++....+.+.. .+
T Consensus 160 ~~~~-----~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~ 234 (480)
T 2vch_A 160 CEFR-----ELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKP 234 (480)
T ss_dssp SCGG-----GCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCC
T ss_pred Cccc-----ccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCC
Confidence 1111 0000112344444444444433322222344444555555667788999999999998777666421 14
Q ss_pred CccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCC-
Q 012474 241 PMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPG- 319 (463)
Q Consensus 241 ~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~- 319 (463)
++++|||++..... ....+.+.++.+||+.++++++|||||||....+.+.+..++.+++..++++||+++.....+
T Consensus 235 ~v~~vGpl~~~~~~--~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~ 312 (480)
T 2vch_A 235 PVYPVGPLVNIGKQ--EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIAN 312 (480)
T ss_dssp CEEECCCCCCCSCS--CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTT
T ss_pred cEEEEecccccccc--ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccc
Confidence 69999999865321 000123456899999987889999999999888889999999999999999999998643111
Q ss_pred --------CccC-CCCchhHHHHhcCCCceee-ccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhh
Q 012474 320 --------VEWL-EPLPKGFLEMLDGRGHIVK-WAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVN 389 (463)
Q Consensus 320 --------~~~~-~~~~~~~~~~~~~~~~~~~-~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~n 389 (463)
...+ ..+|+++.++..++++++. |+||.+||+|+++++||||||+||++||+++|||||++|+++||+.|
T Consensus 313 ~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~n 392 (480)
T 2vch_A 313 SSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMN 392 (480)
T ss_dssp TTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred ccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHH
Confidence 0111 2488999888888888886 99999999999988899999999999999999999999999999999
Q ss_pred HHHH-HHHhhceeecCC----ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 390 ARYV-SHVWRVGLHLER----KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 390 a~rv-~~~~G~G~~l~~----~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
|+++ ++ +|+|+.++. .+|.++|.++|+++|+++++++||++|+++++.+++++.++|++.++++++++.+++
T Consensus 393 a~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 393 AVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 9997 68 799999975 489999999999999854348999999999999999999999999999999998763
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=9.1e-62 Score=479.46 Aligned_cols=436 Identities=27% Similarity=0.485 Sum_probs=327.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCCCCC-----CCC-CCCCceEEeCCCCCCCcccccccHH
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFS--ITIIHTNFNSP-----NPS-NYPHFSFNSISESLWESEVSTENAI 83 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~--Vt~~~~~~~~~-----~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (463)
++++||+++|+|+.||++|+++||++|++|||+ |||++++.+.. ... ...+++++.+++++++......+..
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~ 84 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQ 84 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTT
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChH
Confidence 346899999999999999999999999999765 57788752211 011 1247999999987776542222223
Q ss_pred HHHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHh-cc
Q 012474 84 SLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEK-GY 162 (463)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~-~~ 162 (463)
..+..+...+...+++.++++.+..+ .+||+||+|.++.|+..+|+++|||++.++++++..+..+.+.+..... +.
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETG--RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGV 162 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCS
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccC--CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCC
Confidence 33333333333445556655542111 5799999999988999999999999999999988777665444332221 21
Q ss_pred ccccccCCCCCCCccccCCCCCCCcCCCCcccc--CCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhcCCC
Q 012474 163 LAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVT--HDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPI 240 (463)
Q Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 240 (463)
.+.. .........+++++.++..+++.... .....+.+.+.+..+...+++.+++||+++||++....+++.+ +
T Consensus 163 ~~~~---~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~ 238 (456)
T 2c1x_A 163 SGIQ---GREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-K 238 (456)
T ss_dssp SCCT---TCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-S
T ss_pred cccc---cccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-C
Confidence 1100 00011112344555555555553221 1223344555555566678899999999999998887777765 5
Q ss_pred CccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCC
Q 012474 241 PMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGV 320 (463)
Q Consensus 241 ~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~ 320 (463)
++++|||++...+. ..++.+.++.+|++.++++++|||||||....+.+.+..++.+++..+++++|+++...
T Consensus 239 ~~~~vGpl~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~---- 311 (456)
T 2c1x_A 239 TYLNIGPFNLITPP---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA---- 311 (456)
T ss_dssp CEEECCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG----
T ss_pred CEEEecCcccCccc---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc----
Confidence 79999999875432 11333456889999877889999999999988888899999999999999999997643
Q ss_pred ccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhce
Q 012474 321 EWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVG 400 (463)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G 400 (463)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||+.||+++|||+|++|+++||+.||+++++.||+|
T Consensus 312 --~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g 389 (456)
T 2c1x_A 312 --RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIG 389 (456)
T ss_dssp --GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCE
T ss_pred --hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeE
Confidence 234788888888899999999999999999998899999999999999999999999999999999999999934999
Q ss_pred eecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 401 LHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 401 ~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
+.++. .++.++|.++|+++|+|+++++||++|+++++.++++..+|||+.+.++++++.+.+
T Consensus 390 ~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 390 VRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp EECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred EEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 99987 799999999999999985455899999999999999999999999999999998864
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5.4e-59 Score=460.91 Aligned_cols=426 Identities=26% Similarity=0.423 Sum_probs=320.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCC-C--------CCCCCceEEeCCCCCCCccccccc
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPN-P--------SNYPHFSFNSISESLWESEVSTEN 81 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~-~--------~~~~g~~~~~~~~~~~~~~~~~~~ 81 (463)
+++||+++|+|+.||++|++.||+.|++| ||+|||++++.+... . ....+++|+.+|+...+......+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 87 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKS 87 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGS
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccccCC
Confidence 45899999999999999999999999999 999999999765321 0 112589999999753222211111
Q ss_pred HHHHHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhc
Q 012474 82 AISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKG 161 (463)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
....+......+...++++++++ .. .+||+||+|.++.|+..+|+++|||++.++++++..+..+.+.+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~ll~~~-~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (463)
T 2acv_A 88 PEFYILTFLESLIPHVKATIKTI-LS----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE- 161 (463)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHH-CC----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-
T ss_pred ccHHHHHHHHhhhHHHHHHHHhc-cC----CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc-
Confidence 11113233345555666677665 21 5799999999999999999999999999999988876655433211100
Q ss_pred cccccccCCCCCCC---ccccCCC-CCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhc
Q 012474 162 YLAEQVSFSSDSQL---EKPVTEL-PPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKD 237 (463)
Q Consensus 162 ~~p~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~ 237 (463)
.+.. .... ...++++ ..+...+++.....+ ...+..+.+....+..++.+++||++++|++...++.+.
T Consensus 162 -~~~~-----~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~ 234 (463)
T 2acv_A 162 -EVFD-----DSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDH 234 (463)
T ss_dssp -CCCC-----CSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHH
T ss_pred -CCCC-----CccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhc
Confidence 0000 0000 1234444 444444444322222 224444444555567788899999999999888777765
Q ss_pred C--CCCcccccccccccc-ccCCCcccccchhccccccCCCCeEEEEecCCcc-cCCHHHHHHHHHHHhcCCCceEEEEc
Q 012474 238 F--PIPMFPIGPFHKYCL-ASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIV-VVNVTEFLEIAWGLANSRVPFLWVVR 313 (463)
Q Consensus 238 ~--~~~v~~vGpl~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~v~~~~ 313 (463)
. .+++++|||++.... .......+.+.++.+|++.++++++|||||||.. ..+.+.+..++.+|+..++++||+++
T Consensus 235 ~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 314 (463)
T 2acv_A 235 DEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNS 314 (463)
T ss_dssp CTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred cccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEC
Confidence 5 567999999986532 1000001233568999998878899999999999 77888899999999999999999997
Q ss_pred CCCCCCCccCCCCchhHHHHh--cCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHH
Q 012474 314 PGLVPGVEWLEPLPKGFLEML--DGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNAR 391 (463)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 391 (463)
.+. +.+|+++.++. ++|+++++|+||.++|+|+++++||||||+||+.||+++|||+|++|+++||+.||+
T Consensus 315 ~~~-------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~ 387 (463)
T 2acv_A 315 AEK-------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAF 387 (463)
T ss_dssp CCG-------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHH
T ss_pred CCc-------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHH
Confidence 630 12677787777 789999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHhhceeec-C----C--ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012474 392 YV-SHVWRVGLHL-E----R--KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 392 rv-~~~~G~G~~l-~----~--~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (463)
++ ++ +|+|+.+ + . .++.++|.++|+++|++. ++||++|+++++.+++++.++|++.+++++|++.+.
T Consensus 388 ~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 388 RLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 95 78 6999999 3 2 489999999999999731 579999999999999999999999999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.9e-46 Score=368.40 Aligned_cols=398 Identities=16% Similarity=0.191 Sum_probs=269.5
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccc----cccHHHH
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS----TENAISL 85 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~ 85 (463)
.+++.|||+++++++.||++|+++||++|+++||+|+|++++........ .|++|++++..++..... ..+....
T Consensus 8 ~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (424)
T 2iya_A 8 ASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-AGATPVVYDSILPKESNPEESWPEDQESA 86 (424)
T ss_dssp ---CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCEEEECCCCSCCTTCTTCCCCSSHHHH
T ss_pred CCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEecCccccccccchhhcchhHHHH
Confidence 34678899999999999999999999999999999999999654322222 478999998755433211 1233333
Q ss_pred HHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhccccc
Q 012474 86 LTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAE 165 (463)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 165 (463)
+..+...+..... .+.++.+. .+||+||+|.+..++..+|+.+|||++.+++.+...... .........+.
T Consensus 87 ~~~~~~~~~~~~~-~l~~~l~~----~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~----~~~~~~~~~~~ 157 (424)
T 2iya_A 87 MGLFLDEAVRVLP-QLEDAYAD----DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGF----EEDVPAVQDPT 157 (424)
T ss_dssp HHHHHHHHHHHHH-HHHHHTTT----SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTH----HHHSGGGSCCC
T ss_pred HHHHHHHHHHHHH-HHHHHHhc----cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccc----ccccccccccc
Confidence 3333332222222 33344432 689999999988889999999999999998776421110 00000000000
Q ss_pred c-ccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHH----------hhccCCceEEEcchhhhhHHHHHHh
Q 012474 166 Q-VSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVV----------SKTKACSGLIWNSFEDLEQTELTRL 234 (463)
Q Consensus 166 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~s~~~le~~~~~~~ 234 (463)
. .+. ............... ...+ ......+.+.... ......+.++++++++++++
T Consensus 158 ~~~~~--~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~----- 224 (424)
T 2iya_A 158 ADRGE--EAAAPAGTGDAEEGA-EAED-----GLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK----- 224 (424)
T ss_dssp C------------------------HH-----HHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----
T ss_pred ccccc--ccccccccccchhhh-ccch-----hHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----
Confidence 0 000 000000000000000 0000 0000011111111 11125678999999999875
Q ss_pred hhcCCCCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcC
Q 012474 235 HKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRP 314 (463)
Q Consensus 235 ~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~ 314 (463)
...+++++++|||+..... +..+|++..+++++|||++||......+.+..+++++++.+.+++|.++.
T Consensus 225 ~~~~~~~~~~vGp~~~~~~-----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 293 (424)
T 2iya_A 225 GDTVGDNYTFVGPTYGDRS-----------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGR 293 (424)
T ss_dssp GGGCCTTEEECCCCCCCCG-----------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCT
T ss_pred ccCCCCCEEEeCCCCCCcc-----------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECC
Confidence 2446677999999764211 12467765567889999999998666788889999999888899888875
Q ss_pred CCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHH
Q 012474 315 GLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVS 394 (463)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~ 394 (463)
.... +.+.. .++|+.+++|+||.++|+++++ ||||||+||++||+++|||+|++|...||..||++++
T Consensus 294 ~~~~--~~~~~--------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 361 (424)
T 2iya_A 294 FVDP--ADLGE--------VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIV 361 (424)
T ss_dssp TSCG--GGGCS--------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred cCCh--HHhcc--------CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHH
Confidence 4210 11112 3456699999999999999999 9999999999999999999999999999999999999
Q ss_pred HHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012474 395 HVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 395 ~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (463)
+ +|+|+.++. .+++++|.++|+++|+| ++++++++++++.++ ..++..++++.+.+.+.
T Consensus 362 ~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 362 E-LGLGRHIPRDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIR----EAGGARAAADILEGILA 421 (424)
T ss_dssp H-TTSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred H-CCCEEEcCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHh
Confidence 9 599999987 78999999999999999 789999999999988 56777888777776654
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.7e-45 Score=358.81 Aligned_cols=366 Identities=16% Similarity=0.180 Sum_probs=233.1
Q ss_pred hhhhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCccc-------
Q 012474 5 KESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEV------- 77 (463)
Q Consensus 5 ~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------- 77 (463)
++..+.--+.|||+|+++|+.||++|+++||++|++|||+|||++++..... .. .|+.+.++.........
T Consensus 13 ~g~~~~~~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 13 LGTENLYFQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAV-AE-AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp --------CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHH-HT-TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCcccCCCCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhH-Hh-cCCeeEecCCchhHhhhccccccc
Confidence 4444555678999999999999999999999999999999999998644322 22 47888877643321110
Q ss_pred ---cc----ccHHHHHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHH
Q 012474 78 ---ST----ENAISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLA 150 (463)
Q Consensus 78 ---~~----~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (463)
.. .........+.......+.++++.+.. .+||+||+|.+.+++..+|+.+|||++.+...+......
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS-----WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 00 001111122222222333334444443 679999999999999999999999999987665443221
Q ss_pred HHHHHHHHHhccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhh-ccCCceEEEcchhhhhHH
Q 012474 151 FSAFQILLEKGYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSK-TKACSGLIWNSFEDLEQT 229 (463)
Q Consensus 151 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~s~~~le~~ 229 (463)
...... .. ......+..-. .......+....+.....
T Consensus 166 ~~~~~~---~~---------------------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (400)
T 4amg_A 166 LGALIR---RA---------------------------------------MSKDYERHGVTGEPTGSVRLTTTPPSVEAL 203 (400)
T ss_dssp HHHHHH---HH---------------------------------------THHHHHHTTCCCCCSCEEEEECCCHHHHHT
T ss_pred hhhHHH---HH---------------------------------------HHHHHHHhCCCcccccchhhcccCchhhcc
Confidence 111000 00 00000000000 011122222222222211
Q ss_pred HHHHhhhcCC-CCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCC--HHHHHHHHHHHhcCCC
Q 012474 230 ELTRLHKDFP-IPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVN--VTEFLEIAWGLANSRV 306 (463)
Q Consensus 230 ~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~~ 306 (463)
. +.... +....+.+.... ....+.+|++..+++++||||+||..... .+.+..++++++..+.
T Consensus 204 ~----~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~ 269 (400)
T 4amg_A 204 L----PEDRRSPGAWPMRYVPYN----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDA 269 (400)
T ss_dssp S----CGGGCCTTCEECCCCCCC----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSS
T ss_pred C----cccccCCcccCccccccc----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCc
Confidence 0 00000 112222222111 11224678888888999999999987633 3567889999999999
Q ss_pred ceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccch
Q 012474 307 PFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQ 386 (463)
Q Consensus 307 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ 386 (463)
+++|..++..... ...+|++ +++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++||
T Consensus 270 ~~v~~~~~~~~~~---~~~~~~~--------v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ 336 (400)
T 4amg_A 270 EFVLTLGGGDLAL---LGELPAN--------VRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQ 336 (400)
T ss_dssp EEEEECCTTCCCC---CCCCCTT--------EEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---C
T ss_pred eEEEEecCccccc---cccCCCC--------EEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccH
Confidence 9999987654211 3334554 499999999999999999 99999999999999999999999999999
Q ss_pred hhhHHHHHHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 012474 387 LVNARYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVD 458 (463)
Q Consensus 387 ~~na~rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 458 (463)
+.||+++++ +|+|+.++. .++.+ +|+++|+| ++||++|++++++++ ...+..++++.+.+
T Consensus 337 ~~na~~v~~-~G~g~~l~~~~~~~~----al~~lL~d---~~~r~~a~~l~~~~~----~~~~~~~~a~~le~ 397 (400)
T 4amg_A 337 DTNRDVLTG-LGIGFDAEAGSLGAE----QCRRLLDD---AGLREAALRVRQEMS----EMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHHH-HTSEEECCTTTCSHH----HHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCEEEcCCCCchHH----HHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHH
Confidence 999999999 599999987 66654 67788899 899999999999998 45566666655543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.8e-43 Score=345.85 Aligned_cols=373 Identities=13% Similarity=0.076 Sum_probs=249.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccc-cccHHHHHHHHHHhc
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS-TENAISLLTVLNDKC 93 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 93 (463)
|||+++++++.||++|+++||++|+++||+|||++++........ .|++++.++....+.... .......+ ...+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-VGVPHVPVGPSARAPIQRAKPLTAEDV---RRFT 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCCEEECCC-------CCSCCCHHHH---HHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-cCCeeeeCCCCHHHHhhcccccchHHH---HHHH
Confidence 899999999999999999999999999999999999653222222 589999988543211111 00111111 1112
Q ss_pred CchHHHHHHHHHhCCCCCCCceEEEeCC-chhh--HHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcccccc-ccC
Q 012474 94 VVPFQDCLAKLISNGDQEEPVTCLITDA-IWHF--AQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQ-VSF 169 (463)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~pD~VI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~ 169 (463)
...+.+.++++.... .+||+||+|. +..+ +..+|+.+|||++.+.+.+.... ..+.|.. .+
T Consensus 77 ~~~~~~~~~~l~~~~---~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-----------~~~~p~~~~~- 141 (415)
T 1iir_A 77 TEAIATQFDEIPAAA---EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-----------SPYYPPPPLG- 141 (415)
T ss_dssp HHHHHHHHHHHHHHT---TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSCCCC---
T ss_pred HHHHHHHHHHHHHHh---cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-----------CcccCCccCC-
Confidence 222334455554211 6799999998 6788 89999999999999988753311 1111211 00
Q ss_pred CCCCCCccc-cCCCCCCCcCCCCccccCCCchHH----HHHHHHHhh------------ccCCceEEEcchhhhhH-HHH
Q 012474 170 SSDSQLEKP-VTELPPLRVKDIPIIVTHDTRNFH----QLISAVVSK------------TKACSGLIWNSFEDLEQ-TEL 231 (463)
Q Consensus 170 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------------~~~~~~~l~~s~~~le~-~~~ 231 (463)
..+... ..|. +.... .....+ ..+...... .... ..++++++++++ +
T Consensus 142 ---~~~~~~~~~n~-------~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-- 206 (415)
T 1iir_A 142 ---EPSTQDTIDIP-------AQWER--NNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-- 206 (415)
T ss_dssp ----------CHHH-------HHHHH--HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC--
T ss_pred ---ccccchHHHHH-------HHHHH--HHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC--
Confidence 000000 0000 00000 000000 001111111 1122 578999999986 3
Q ss_pred HHhhhcCCCCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEE
Q 012474 232 TRLHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWV 311 (463)
Q Consensus 232 ~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~ 311 (463)
+..+ ++++|||+..... .+.+.++.+|++. ++++|||++||.. ...+....+++++++.+.+++|+
T Consensus 207 ---~~~~--~~~~vG~~~~~~~------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~ 272 (415)
T 1iir_A 207 ---PTDL--DAVQTGAWILPDE------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILS 272 (415)
T ss_dssp ---CCSS--CCEECCCCCCCCC------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEEC
T ss_pred ---cccC--CeEeeCCCccCcc------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEE
Confidence 2222 6899999876532 1223458899976 3579999999987 57778888999999999999998
Q ss_pred EcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHH
Q 012474 312 VRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNAR 391 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 391 (463)
++.... + ...++ +|+.+++|+||.++|+.+++ ||||||+||++||+++|||+|++|..+||..||+
T Consensus 273 ~g~~~~---~-~~~~~--------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~ 338 (415)
T 1iir_A 273 RGWADL---V-LPDDG--------ADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAG 338 (415)
T ss_dssp TTCTTC---C-CSSCG--------GGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred eCCCcc---c-ccCCC--------CCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHH
Confidence 875431 0 11233 34589999999999988888 9999999999999999999999999999999999
Q ss_pred HHHHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 012474 392 YVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVD 458 (463)
Q Consensus 392 rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 458 (463)
++++ +|+|+.++. .++.++|.++|+++ +| ++++++++++++.++ ..++.+++++.+.+
T Consensus 339 ~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ 397 (415)
T 1iir_A 339 RVAE-LGVGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDA 397 (415)
T ss_dssp HHHH-HTSEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHH
T ss_pred HHHH-CCCcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHH
Confidence 9999 599999987 78999999999999 88 889999999998876 34444555444443
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=4.4e-42 Score=337.63 Aligned_cols=380 Identities=14% Similarity=0.153 Sum_probs=265.1
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccc----cccHHHHH
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS----TENAISLL 86 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~ 86 (463)
..+.|||+++++++.||++|+++||++|+++||+|+|++++........ .|+.+..++...+..... ..+....+
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-AGATVVPYQSEIIDADAAEVFGSDDLGVRP 95 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCEEEECCCSTTTCCHHHHHHSSSSCHHH
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-cCCEEEeccccccccccchhhccccHHHHH
Confidence 3557999999999999999999999999999999999998543332222 589999988644432110 00111111
Q ss_pred HH-HHHhcCchHHHHHHHHHhCCCCCCCceEEEeC-CchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcccc
Q 012474 87 TV-LNDKCVVPFQDCLAKLISNGDQEEPVTCLITD-AIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLA 164 (463)
Q Consensus 87 ~~-~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 164 (463)
.. +.......+.++.+. .+. .+||+||+| ....++..+|+.+|||++.+.+.......... .+...... ..
T Consensus 96 ~~~~~~~~~~~~~~l~~~-l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~-~~ 168 (415)
T 3rsc_A 96 HLMYLRENVSVLRATAEA-LDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMVTLA-GT 168 (415)
T ss_dssp HHHHHHHHHHHHHHHHHH-HSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHHHHH-TC
T ss_pred HHHHHHHHHHHHHHHHHH-Hhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-cccccccc-cc
Confidence 12 222222223333333 333 789999999 77788999999999999998755332100000 00000000 00
Q ss_pred ccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHH----------HhhccCC-ceEEEcchhhhhHHHHHH
Q 012474 165 EQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAV----------VSKTKAC-SGLIWNSFEDLEQTELTR 233 (463)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~l~~s~~~le~~~~~~ 233 (463)
.. .. ......+.+... ....... +..++.+.++++++
T Consensus 169 ~~---------p~-------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~---- 216 (415)
T 3rsc_A 169 ID---------PL-------------------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA---- 216 (415)
T ss_dssp CC---------GG-------------------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT----
T ss_pred CC---------hh-------------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC----
Confidence 00 00 000001111111 1112222 77788888888764
Q ss_pred hhhcCCCCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEc
Q 012474 234 LHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVR 313 (463)
Q Consensus 234 ~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~ 313 (463)
+..++.+++++||+...... ..+|....+++++||+++||......+.+..+++++++.+.+++|.++
T Consensus 217 -~~~~~~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g 284 (415)
T 3rsc_A 217 -GDTFDDRFVFVGPCFDDRRF-----------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLG 284 (415)
T ss_dssp -GGGCCTTEEECCCCCCCCGG-----------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECT
T ss_pred -cccCCCceEEeCCCCCCccc-----------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeC
Confidence 44556679999987654221 244555455788999999999877777889999999998888898887
Q ss_pred CCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHH
Q 012474 314 PGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYV 393 (463)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv 393 (463)
.+. ..+.+..+ ++|+.+.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||..||+++
T Consensus 285 ~~~--~~~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l 352 (415)
T 3rsc_A 285 GQV--DPAALGDL--------PPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRV 352 (415)
T ss_dssp TTS--CGGGGCCC--------CTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH
T ss_pred CCC--ChHHhcCC--------CCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHH
Confidence 542 11112223 345689999999999999999 999999999999999999999999999999999999
Q ss_pred HHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 394 SHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 394 ~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
++. |+|..++. .++++.|.++|+++++| ++++++++++++.+. ..++.+++++.+.+.+.+
T Consensus 353 ~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 353 DQL-GLGAVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVR----RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HHH-TCEEECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHH
T ss_pred HHc-CCEEEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhc
Confidence 995 99999988 78999999999999999 899999999999988 578888888888777654
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6e-43 Score=343.64 Aligned_cols=371 Identities=12% Similarity=0.032 Sum_probs=250.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccc--cccHHHHHHHHHHh
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS--TENAISLLTVLNDK 92 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 92 (463)
|||++++.++.||++|+++||++|+++||+|+|++++........ .|+++++++......... .......+..+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-VGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAA- 78 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHH-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cCCeeeecCCCHHHHHhhccccchhHHHHHHHH-
Confidence 899999999999999999999999999999999998643222222 578999888543211100 0111111111111
Q ss_pred cCchHHHHHHHHHhCCCCCCCceEEEeCC-chhh--HHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhccccccccC
Q 012474 93 CVVPFQDCLAKLISNGDQEEPVTCLITDA-IWHF--AQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQVSF 169 (463)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~pD~VI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 169 (463)
..+.+.++.+.... .+||+||+|. +.++ +..+|+.+|||++.+.+++.... ..+.|...+
T Consensus 79 --~~~~~~~~~l~~~~---~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~-----------~~~~p~~~~- 141 (416)
T 1rrv_A 79 --MTVEMQFDAVPGAA---EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-----------SPHLPPAYD- 141 (416)
T ss_dssp --HHHHHHHHHHHHHT---TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSCCCBC-
T ss_pred --HHHHHHHHHHHHHh---cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-----------CcccCCCCC-
Confidence 12233444444211 6799999996 4677 88999999999999887753210 111110000
Q ss_pred CCCCCC-ccccCCCCCCCcCCCCccccCCCchH----HHHHHHHH------------hhccCCceEEEcchhhhhHHHHH
Q 012474 170 SSDSQL-EKPVTELPPLRVKDIPIIVTHDTRNF----HQLISAVV------------SKTKACSGLIWNSFEDLEQTELT 232 (463)
Q Consensus 170 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~~~~l~~s~~~le~~~~~ 232 (463)
+.+ ..++.+. +.... ..... ...+.... +..... .++++++++++++
T Consensus 142 ---~~~~~~r~~n~-------~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~--- 205 (416)
T 1rrv_A 142 ---EPTTPGVTDIR-------VLWEE--RAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL--- 205 (416)
T ss_dssp ---SCCCTTCCCHH-------HHHHH--HHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC---
T ss_pred ---CCCCchHHHHH-------HHHHH--HHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC---
Confidence 000 0000000 00000 00000 00011111 111223 6899999999864
Q ss_pred HhhhcCCCCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCccc-CCHHHHHHHHHHHhcCCCceEEE
Q 012474 233 RLHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVV-VNVTEFLEIAWGLANSRVPFLWV 311 (463)
Q Consensus 233 ~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~v~~ 311 (463)
+..+ ++++|||+..+.. .+.+.++.+|++. ++++|||++||... ...+.+..++++++..+.+++|+
T Consensus 206 --~~~~--~~~~vG~~~~~~~------~~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~ 273 (416)
T 1rrv_A 206 --QPDV--DAVQTGAWLLSDE------RPLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILS 273 (416)
T ss_dssp --CSSC--CCEECCCCCCCCC------CCCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred --CCCC--CeeeECCCccCcc------CCCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEE
Confidence 1222 6899999876532 1223457899976 35799999999864 45567888999999999999999
Q ss_pred EcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHH
Q 012474 312 VRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNAR 391 (463)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 391 (463)
++.... + ...+ ++|+.+++|+||.++|+++++ ||||||+||++||+++|||+|++|...||..||+
T Consensus 274 ~g~~~~---~-~~~~--------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~ 339 (416)
T 1rrv_A 274 RGWTEL---V-LPDD--------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAG 339 (416)
T ss_dssp CTTTTC---C-CSCC--------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHH
T ss_pred eCCccc---c-ccCC--------CCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHH
Confidence 876531 0 1123 345689999999999988888 9999999999999999999999999999999999
Q ss_pred HHHHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHH
Q 012474 392 YVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERL 456 (463)
Q Consensus 392 rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~ 456 (463)
++++ +|+|+.++. .++.++|.++|+++ .| +++++++++++++++ ..++. ++++.+
T Consensus 340 ~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i 395 (416)
T 1rrv_A 340 RVAA-LGIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVL----TDGAA-AAADLV 395 (416)
T ss_dssp HHHH-HTSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC----CCHHH-HHHHHH
T ss_pred HHHH-CCCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh----hcCcH-HHHHHH
Confidence 9999 599999987 78999999999999 88 889999999998887 34444 555555
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4.8e-41 Score=328.83 Aligned_cols=377 Identities=18% Similarity=0.215 Sum_probs=262.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcc----cccccHHHHHHH
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESE----VSTENAISLLTV 88 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~ 88 (463)
+.|||++++.++.||++|++.||++|+++||+|+|++++........ .|+.+..++...+... ....+....+..
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-AGAEVVLYKSEFDTFHVPEVVKQEDAETQLHL 81 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-TTCEEEECCCGGGTSSSSSSSCCTTHHHHHHH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-cCCEEEecccccccccccccccccchHHHHHH
Confidence 34599999999999999999999999999999999998543222222 5899998885333211 111223333333
Q ss_pred -HHHhcCchHHHHHHHHHhCCCCCCCceEEEeC-CchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcccccc
Q 012474 89 -LNDKCVVPFQDCLAKLISNGDQEEPVTCLITD-AIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQ 166 (463)
Q Consensus 89 -~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 166 (463)
+.......+.++.+.+.+ .+||+||+| .+..++..+|+.+|||++.+.+.......... .+....... ...
T Consensus 82 ~~~~~~~~~~~~l~~~l~~-----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 154 (402)
T 3ia7_A 82 VYVRENVAILRAAEEALGD-----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKSNG-QRH 154 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHHHT-CCC
T ss_pred HHHHHHHHHHHHHHHHHhc-----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccccc-ccC
Confidence 333332333334444433 789999999 77788999999999999998755332110000 000000000 000
Q ss_pred ccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHH----------HhhccCC-ceEEEcchhhhhHHHHHHhh
Q 012474 167 VSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAV----------VSKTKAC-SGLIWNSFEDLEQTELTRLH 235 (463)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~l~~s~~~le~~~~~~~~ 235 (463)
. . ........+.+. ....... +..+..+.++++++ .
T Consensus 155 ------~---~-------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~ 201 (402)
T 3ia7_A 155 ------P---A-------------------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----A 201 (402)
T ss_dssp ------G---G-------------------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----G
T ss_pred ------h---h-------------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----c
Confidence 0 0 000001111111 1111222 66777888887764 4
Q ss_pred hcCCCCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCC
Q 012474 236 KDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPG 315 (463)
Q Consensus 236 ~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~ 315 (463)
..++.+++++||+...... ..+|+...+++++||+++||......+.+..++++++..+.+++|.++.+
T Consensus 202 ~~~~~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 270 (402)
T 3ia7_A 202 ETFDERFAFVGPTLTGRDG-----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGF 270 (402)
T ss_dssp GGCCTTEEECCCCCCC---------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTT
T ss_pred ccCCCCeEEeCCCCCCccc-----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCc
Confidence 4456679999987654221 23455545578899999999987777788999999999888888887754
Q ss_pred CCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceecccc-ccchhhhHHHHH
Q 012474 316 LVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPC-FGDQLVNARYVS 394 (463)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~rv~ 394 (463)
. ..+.+..+ ++|+.+.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|. ..||..||++++
T Consensus 271 ~--~~~~~~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~ 338 (402)
T 3ia7_A 271 L--DPAVLGPL--------PPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVI 338 (402)
T ss_dssp S--CGGGGCSC--------CTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHH
T ss_pred C--ChhhhCCC--------CCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHH
Confidence 2 10112223 455689999999999999999 9999999999999999999999999 999999999999
Q ss_pred HHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012474 395 HVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 395 ~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (463)
+. |+|..+.. .++++.|.++|.++|+| ++++++++++++.+. ..++.+++++.+.+.+.
T Consensus 339 ~~-g~g~~~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 339 EL-GLGSVLRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGPARAADEVEAYLG 398 (402)
T ss_dssp HT-TSEEECCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred Hc-CCEEEccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHh
Confidence 95 99999988 78999999999999999 889999999999887 67788888888877664
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.1e-40 Score=330.05 Aligned_cols=376 Identities=12% Similarity=0.089 Sum_probs=248.0
Q ss_pred ccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCC-ccc----------
Q 012474 9 VQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWE-SEV---------- 77 (463)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~---------- 77 (463)
..+...|||++++.++.||++|+++||++|+++||+|+|++++........ .|+++++++..... ...
T Consensus 15 ~~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 15 VPRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp ----CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred cccCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-CCCceeecCCccchHHHhhhhhcccccc
Confidence 344567999999999999999999999999999999999998653222222 68999998854310 000
Q ss_pred ----------cc-ccHH---HHHHHHHHhcC-----c-hHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCe
Q 012474 78 ----------ST-ENAI---SLLTVLNDKCV-----V-PFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPR 137 (463)
Q Consensus 78 ----------~~-~~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~ 137 (463)
.. .... ..+..+...+. . .+.++++.+.+ .+||+||+|.+..++..+|+.+|||+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pDlVv~d~~~~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-----WRPDLVIWEPLTFAAPIAAAVTGTPH 168 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-----HCCSEEEECTTCTHHHHHHHHHTCCE
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-----cCCCEEEecCcchhHHHHHHHcCCCE
Confidence 00 0111 11112222111 2 44555554444 67999999997788999999999999
Q ss_pred EEEeCchhHHHHHHHHHHHHHHhccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhcc----
Q 012474 138 IVLRTSSISSFLAFSAFQILLEKGYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTK---- 213 (463)
Q Consensus 138 v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 213 (463)
+.+...+....... .+......+.+.. . ......+.+....+...
T Consensus 169 v~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~----------------------~~~~~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 169 ARLLWGPDITTRAR--QNFLGLLPDQPEE-------H----------------------REDPLAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp EEECSSCCHHHHHH--HHHHHHGGGSCTT-------T----------------------CCCHHHHHHHHHHHHTTCCCC
T ss_pred EEEecCCCcchhhh--hhhhhhccccccc-------c----------------------ccchHHHHHHHHHHHcCCCCC
Confidence 99866543321111 0111111111110 0 00112222222222111
Q ss_pred -----CCceEEEcchhhhhHHHHHHhhhcCC-CCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcc
Q 012474 214 -----ACSGLIWNSFEDLEQTELTRLHKDFP-IPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIV 287 (463)
Q Consensus 214 -----~~~~~l~~s~~~le~~~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~ 287 (463)
..+..+..+.+.++++ .+++ .++.++++ .. ..++.+|++..+++++|||++||..
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~---~~----------~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD------TGLKTVGMRYVDY---NG----------PSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC------CCCCEEECCCCCC---CS----------SCCCCGGGSSCCSSCEEEEEC----
T ss_pred CccccCCCeEEEecCccccCC------CCCCCCceeeeCC---CC----------CcccchHhhcCCCCCEEEEECCCCc
Confidence 1344566555655532 1111 12333311 11 1225678876567789999999987
Q ss_pred cC---CHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccCh
Q 012474 288 VV---NVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGW 364 (463)
Q Consensus 288 ~~---~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~ 364 (463)
.. ..+.+..++++++..+.+++|++++... +.+..+ ++|+.+++|+||.++|+.+++ ||||||+
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~---~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~V~~~G~ 345 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQL---EGVANI--------PDNVRTVGFVPMHALLPTCAA--TVHHGGP 345 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTTT---SSCSSC--------CSSEEECCSCCHHHHGGGCSE--EEECCCH
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcch---hhhccC--------CCCEEEecCCCHHHHHhhCCE--EEECCCH
Confidence 63 3356777889999889999998875431 112122 356689999999999999999 9999999
Q ss_pred hhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Q 012474 365 NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSL 443 (463)
Q Consensus 365 ~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~ 443 (463)
||++||+++|||+|++|...||..||+++++ .|+|+.++. .++++.|.++|+++++| ++++++++++++.+.
T Consensus 346 ~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~--- 418 (441)
T 2yjn_A 346 GSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDML--- 418 (441)
T ss_dssp HHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH---
Confidence 9999999999999999999999999999999 599999987 78999999999999999 899999999999988
Q ss_pred hhCCChHHHHHHHHHHHh
Q 012474 444 LEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 444 ~~~g~~~~~~~~~~~~~~ 461 (463)
..++..++++.+.+.+.
T Consensus 419 -~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 419 -AEPSPAEVVGICEELAA 435 (441)
T ss_dssp -TSCCHHHHHHHHHHHHH
T ss_pred -cCCCHHHHHHHHHHHHH
Confidence 57777888777776654
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.9e-41 Score=331.21 Aligned_cols=373 Identities=14% Similarity=0.083 Sum_probs=246.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCccc-ccccHHHHHHHHHHhc
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEV-STENAISLLTVLNDKC 93 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 93 (463)
|||+|++.++.||++|+++||++|+++||+|+|++++....... ..|+.+.+++........ ...........+....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~-~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCA-EVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVV 79 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHH-HTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH-HcCCceeecCCCHHHHhccccCCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999854322222 258899988744321100 0000000000111111
Q ss_pred CchHHHHHHHHHhCCCCCCCceEEEeCCchhhH---HHHHHHcCCCeEEEeCchhHHHHHHHH-HHHHHHh---cccccc
Q 012474 94 VVPFQDCLAKLISNGDQEEPVTCLITDAIWHFA---QTVADTLRLPRIVLRTSSISSFLAFSA-FQILLEK---GYLAEQ 166 (463)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~-~~~~~~~---~~~p~~ 166 (463)
...+. .+.++. .+||+||+|.....+ ..+|+.+|||++.+...+......... ....... ......
T Consensus 80 ~~~~~-~l~~~~------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (404)
T 3h4t_A 80 AEWFD-KVPAAI------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFGDA 152 (404)
T ss_dssp HHHHH-HHHHHH------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHh------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHHHHHhHHH
Confidence 11111 222333 359999998665444 789999999999988876531110000 0000000 000000
Q ss_pred ccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhcCCCCccccc
Q 012474 167 VSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIG 246 (463)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vG 246 (463)
...+... .++.. ... .. ... ..+..+.++.+.+.+. ..++..++++|
T Consensus 153 -----~~~~~~~-lgl~~------------~~~-~~-------~~~-~~~~~l~~~~~~l~p~------~~~~~~~~~~G 199 (404)
T 3h4t_A 153 -----VNSHRAS-IGLPP------------VEH-LY-------DYG-YTDQPWLAADPVLSPL------RPTDLGTVQTG 199 (404)
T ss_dssp -----HHHHHHH-TTCCC------------CCC-HH-------HHH-HCSSCEECSCTTTSCC------CTTCCSCCBCC
T ss_pred -----HHHHHHH-cCCCC------------Ccc-hh-------hcc-ccCCeEEeeCcceeCC------CCCCCCeEEeC
Confidence 0000000 00000 000 00 000 1233466777777653 22345688999
Q ss_pred cccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCC
Q 012474 247 PFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPL 326 (463)
Q Consensus 247 pl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~ 326 (463)
++..+.. ..++ .++.+|++. ++++|||++||... ..+.+..+++++++.+.++||+++..... ....
T Consensus 200 ~~~~~~~----~~~~--~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~----~~~~ 266 (404)
T 3h4t_A 200 AWILPDQ----RPLS--AELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLG----RIDE 266 (404)
T ss_dssp CCCCCCC----CCCC--HHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCC----CSSC
T ss_pred ccccCCC----CCCC--HHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccc----cccC
Confidence 8765432 2233 447888875 56899999999987 67788999999999999999998764311 1112
Q ss_pred chhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCC-
Q 012474 327 PKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER- 405 (463)
Q Consensus 327 ~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~- 405 (463)
++|+.+++|+||.++|+++++ ||||||+||+.||+++|||+|++|+.+||+.||+++++ .|+|..++.
T Consensus 267 --------~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~~ 335 (404)
T 3h4t_A 267 --------GDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDGP 335 (404)
T ss_dssp --------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSSS
T ss_pred --------CCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCcC
Confidence 355689999999999999999 99999999999999999999999999999999999999 599999987
Q ss_pred ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012474 406 KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 406 ~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (463)
.++++.|.++|+++++ ++|+++++++++.+. . .+.+++++.+.+.+.
T Consensus 336 ~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 336 TPTVESLSAALATALT----PGIRARAAAVAGTIR----T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp SCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHh
Confidence 7899999999999997 379999999999886 4 566666666665543
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.4e-39 Score=321.42 Aligned_cols=379 Identities=14% Similarity=0.152 Sum_probs=251.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccc----cccHHHHHH
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVS----TENAISLLT 87 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~ 87 (463)
|+.|||++++.++.||++|++.|+++|+++||+|+++++......... .|++++.++...+..... ..+....+.
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-TGPRPVLYHSTLPGPDADPEAWGSTLLDNVE 83 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-TSCEEEECCCCSCCTTSCGGGGCSSHHHHHH
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEEcCCcCccccccccccchhhHHHHH
Confidence 446899999999999999999999999999999999998654222222 588999888644322111 112223332
Q ss_pred HHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcc--ccc
Q 012474 88 VLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGY--LAE 165 (463)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~--~p~ 165 (463)
.+...+...+..+ .++.+. .+||+||+|.+..++..+|+.+|||++.+.+.+.................. .+.
T Consensus 84 ~~~~~~~~~~~~l-~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (430)
T 2iyf_A 84 PFLNDAIQALPQL-ADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTER 158 (430)
T ss_dssp HHHHHHHHHHHHH-HHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHH-HHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhhhhccchH
Confidence 2222222223333 333333 789999999877788999999999999988664311100000000000000 000
Q ss_pred cccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHH------HHhhccCCceEEEcchhhhhHHHHHHhhhcCC
Q 012474 166 QVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISA------VVSKTKACSGLIWNSFEDLEQTELTRLHKDFP 239 (463)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 239 (463)
... ......+.+.+ ........+.+++++.+.++++ ...++
T Consensus 159 ~~~----------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~ 205 (430)
T 2iyf_A 159 GRA----------------------------YYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADRVD 205 (430)
T ss_dssp HHH----------------------------HHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGGSC
T ss_pred HHH----------------------------HHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----cccCC
Confidence 000 00000000000 0011224678899999998864 23455
Q ss_pred CC-ccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcC-CCceEEEEcCCCC
Q 012474 240 IP-MFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS-RVPFLWVVRPGLV 317 (463)
Q Consensus 240 ~~-v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~ 317 (463)
.+ ++++||....... ..+|.+..+++++||+++||......+.+..+++++++. +.+++|.++.+..
T Consensus 206 ~~~v~~vG~~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~ 274 (430)
T 2iyf_A 206 EDVYTFVGACQGDRAE-----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT 274 (430)
T ss_dssp TTTEEECCCCC----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---C
T ss_pred CccEEEeCCcCCCCCC-----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC
Confidence 66 9999985432110 134554445678999999999855677888899999886 7788888765421
Q ss_pred CCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHh
Q 012474 318 PGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVW 397 (463)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~ 397 (463)
.+.++. .++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|..+||..||+++++ .
T Consensus 275 --~~~l~~--------~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~ 341 (430)
T 2iyf_A 275 --PAELGE--------LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-L 341 (430)
T ss_dssp --GGGGCS--------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-T
T ss_pred --hHHhcc--------CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-c
Confidence 011111 3456689999999999999999 99999999999999999999999999999999999999 5
Q ss_pred hceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012474 398 RVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 460 (463)
Q Consensus 398 G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 460 (463)
|+|..++. .+++++|.++|.++++| +++++++.++++.+.+ .++.++.++.+.+.+
T Consensus 342 g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 342 GVARKLATEEATADLLRETALALVDD---PEVARRLRRIQAEMAQ----EGGTRRAADLIEAEL 398 (430)
T ss_dssp TSEEECCCC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HCHHHHHHHHHHTTS
T ss_pred CCEEEcCCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHh
Confidence 99999987 78999999999999998 7899999999888873 355666666655443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=8.5e-39 Score=310.92 Aligned_cols=353 Identities=13% Similarity=0.107 Sum_probs=249.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcc-----------c-ccccH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESE-----------V-STENA 82 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~-~~~~~ 82 (463)
|||++++.++.||++|+++|+++|+++||+|++++++....... ..|+.++.++....... . .....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVT-GVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVA 79 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH-HTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHH-hCCCEEEEeCCcchHHHHhhhcccCccccCcchHH
Confidence 79999999999999999999999999999999999854321111 25788888875321000 0 00011
Q ss_pred HHHH-HH-HHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHh
Q 012474 83 ISLL-TV-LNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEK 160 (463)
Q Consensus 83 ~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 160 (463)
...+ .. +...+...+.++.+.+.+ .+||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~------------- 141 (384)
T 2p6p_A 80 QARFTGRWFARMAASSLPRMLDFSRA-----WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA------------- 141 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc-----cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-------------
Confidence 1111 11 112222233344444443 679999999877888899999999999876442110
Q ss_pred ccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhc-----cCCceEEEcchhhhhHHHHHHhh
Q 012474 161 GYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKT-----KACSGLIWNSFEDLEQTELTRLH 235 (463)
Q Consensus 161 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~~~~~~~~ 235 (463)
. . . .......+.+....+ ...+.+++++.+.++++.
T Consensus 142 -----~-----~--~----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~----- 182 (384)
T 2p6p_A 142 -----D-----G--I----------------------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN----- 182 (384)
T ss_dssp -----T-----T--T----------------------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----
T ss_pred -----c-----h--h----------------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----
Confidence 0 0 0 000011111111111 115678899998887631
Q ss_pred hcCC-CCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccC-----CHHHHHHHHHHHhcCCCceE
Q 012474 236 KDFP-IPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVV-----NVTEFLEIAWGLANSRVPFL 309 (463)
Q Consensus 236 ~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~v 309 (463)
.++ .++.+++ .. .+ .++.+|++..+++++||+++||.... +.+.+..+++++++.+.+++
T Consensus 183 -~~~~~~~~~~~-~~--~~----------~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 248 (384)
T 2p6p_A 183 -AAPARMMRHVA-TS--RQ----------CPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELI 248 (384)
T ss_dssp -SCCCEECCCCC-CC--CC----------CBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEE
T ss_pred -CCCCCceEecC-CC--CC----------CCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEE
Confidence 122 2344543 11 01 12567887645678999999998864 45678889999999899999
Q ss_pred EEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhh
Q 012474 310 WVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVN 389 (463)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~n 389 (463)
|++++.. .+.+ +..++|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||..|
T Consensus 249 ~~~g~~~----------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~ 314 (384)
T 2p6p_A 249 VAAPDTV----------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAP 314 (384)
T ss_dssp EECCHHH----------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred EEeCCCC----------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHH
Confidence 9876421 1222 235678899 99999999999998 99999999999999999999999999999999
Q ss_pred HHHHHHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012474 390 ARYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 390 a~rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (463)
|+++++ .|+|+.++. .+++++|.++|+++|+| ++++++++++++.++ ...+.+++++.+.+++.
T Consensus 315 a~~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 315 ARRVAD-YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREIS----GMPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHH-HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHHH
T ss_pred HHHHHH-CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHhh
Confidence 999999 599999987 78999999999999999 889999999999998 67788888888777664
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=3.9e-38 Score=307.74 Aligned_cols=363 Identities=16% Similarity=0.138 Sum_probs=223.6
Q ss_pred hhhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCC---------cc
Q 012474 6 ESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWE---------SE 76 (463)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~---------~~ 76 (463)
.....++.+|||+|++.++.||++|+++|+++|+++||+|++++++........ .|+.+..++..... ..
T Consensus 7 ~~~~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 7 SSGVPRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-AGLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp --------CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-TTCCEEEEESSCCHHHHHSBCTTSC
T ss_pred cCCCCCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-CCCeeEecCCccchHhhhhhhccCc
Confidence 345566778999999999999999999999999999999999998532222222 57778877632110 00
Q ss_pred --cccccHH----HHHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHH
Q 012474 77 --VSTENAI----SLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLA 150 (463)
Q Consensus 77 --~~~~~~~----~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 150 (463)
....+.. .....+.......+.++.+.+.+ ++||+|++|...+++..+|+.+|+|++.+..........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER-----WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 0000111 11111222222223333333333 679999999877889999999999999877664321111
Q ss_pred HHHHHHHHHhccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHH-HhhccCCceEEEcchhhhhHH
Q 012474 151 FSAFQILLEKGYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAV-VSKTKACSGLIWNSFEDLEQT 229 (463)
Q Consensus 151 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~s~~~le~~ 229 (463)
.... ... + ...+.+. .......+..+..+.+.+..+
T Consensus 161 ~~~~----~~~-l--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T 4fzr_A 161 KSAG----VGE-L--------------------------------------APELAELGLTDFPDPLLSIDVCPPSMEAQ 197 (398)
T ss_dssp HHHH----HHH-T--------------------------------------HHHHHTTTCSSCCCCSEEEECSCGGGC--
T ss_pred hHHH----HHH-H--------------------------------------HHHHHHcCCCCCCCCCeEEEeCChhhCCC
Confidence 0000 000 0 0000000 000112345566666666553
Q ss_pred HHHHhhhcCCCCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccC--------CHHHHHHHHHHH
Q 012474 230 ELTRLHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVV--------NVTEFLEIAWGL 301 (463)
Q Consensus 230 ~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~al 301 (463)
. .....++.++++.. . ...+.+|+...+++++||+++||.... ..+.+..+++++
T Consensus 198 ~-----~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al 260 (398)
T 4fzr_A 198 P-----KPGTTKMRYVPYNG---R---------NDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQEL 260 (398)
T ss_dssp -------CCCEECCCCCCCC---S---------SCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHG
T ss_pred C-----CCCCCCeeeeCCCC---C---------CCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHH
Confidence 1 10111233332210 0 112456666555778999999998653 345688899999
Q ss_pred hcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccc
Q 012474 302 ANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQP 381 (463)
Q Consensus 302 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P 381 (463)
++.+.+++|+.++... +.+. ..++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|
T Consensus 261 ~~~~~~~v~~~~~~~~---~~l~--------~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p 327 (398)
T 4fzr_A 261 PKLGFEVVVAVSDKLA---QTLQ--------PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVP 327 (398)
T ss_dssp GGGTCEEEECCCC-------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred HhCCCEEEEEeCCcch---hhhc--------cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecC
Confidence 9989999988765420 1112 23456699999999999999999 999999999999999999999999
Q ss_pred cccchhhhHHHHHHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 012474 382 CFGDQLVNARYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLER 455 (463)
Q Consensus 382 ~~~DQ~~na~rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~ 455 (463)
...||..||+++++. |+|+.++. .++++.|.++|.++|+| +++++++++.++.+. +..+.++.++.
T Consensus 328 ~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~ 394 (398)
T 4fzr_A 328 VIAEVWDSARLLHAA-GAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMA----TLPTPADIVRL 394 (398)
T ss_dssp CSGGGHHHHHHHHHT-TSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHT----TSCCHHHHHHH
T ss_pred CchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH----cCCCHHHHHHH
Confidence 999999999999995 99999987 78999999999999999 789999999999887 45555444443
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.9e-37 Score=300.61 Aligned_cols=358 Identities=15% Similarity=0.137 Sum_probs=239.1
Q ss_pred hhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCc-----------
Q 012474 7 SNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWES----------- 75 (463)
Q Consensus 7 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------- 75 (463)
..+.+.+.|||+|++.++.||++|++.|+++|.++||+|+++++ ........ .|+.+..++......
T Consensus 13 ~~~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~ 90 (398)
T 3oti_A 13 SGHIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-AGLEVVDVAPDYSAVKVFEQVAKDNP 90 (398)
T ss_dssp ------CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-TTCEEEESSTTCCHHHHHHHHHHHCH
T ss_pred ccchhhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-CCCeeEecCCccCHHHHhhhcccCCc
Confidence 34445667999999999999999999999999999999999998 33222222 689999988532100
Q ss_pred ----------ccccccHHHHHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchh
Q 012474 76 ----------EVSTENAISLLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSI 145 (463)
Q Consensus 76 ----------~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~ 145 (463)
..........+ .......+.++.+.+.+ ++||+||+|...+++..+|+.+|+|++.+.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~-----~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~ 162 (398)
T 3oti_A 91 RFAETVATRPAIDLEEWGVQI---AAVNRPLVDGTMALVDD-----YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW 162 (398)
T ss_dssp HHHHTGGGSCCCSGGGGHHHH---HHHHGGGHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC
T ss_pred cccccccCChhhhHHHHHHHH---HHHHHHHHHHHHHHHHH-----cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCC
Confidence 00011111222 22222334444444443 6799999998888899999999999998765422
Q ss_pred HHHHHHHHHHHHHHhccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhh
Q 012474 146 SSFLAFSAFQILLEKGYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFED 225 (463)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 225 (463)
....... .. . ......+.+..-.....+..+..+.+.
T Consensus 163 ~~~~~~~----~~-~--------------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~ 199 (398)
T 3oti_A 163 RTRGMHR----SI-A--------------------------------------SFLTDLMDKHQVSLPEPVATIESFPPS 199 (398)
T ss_dssp CCTTHHH----HH-H--------------------------------------TTCHHHHHHTTCCCCCCSEEECSSCGG
T ss_pred Cccchhh----HH-H--------------------------------------HHHHHHHHHcCCCCCCCCeEEEeCCHH
Confidence 1100000 00 0 000001111000011224455555555
Q ss_pred hhHHHHHHhhhcCCCCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccC--CHHHHHHHHHHHhc
Q 012474 226 LEQTELTRLHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVV--NVTEFLEIAWGLAN 303 (463)
Q Consensus 226 le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~ 303 (463)
+..+ ......++.++. . .. ...+.+|+...+++++||+++||.... ..+.+..+++++++
T Consensus 200 ~~~~-----~~~~~~~~~~~~-~--~~----------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 3oti_A 200 LLLE-----AEPEGWFMRWVP-Y--GG----------GAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE 261 (398)
T ss_dssp GGTT-----SCCCSBCCCCCC-C--CC----------CEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT
T ss_pred HCCC-----CCCCCCCccccC-C--CC----------CcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc
Confidence 5432 000011222221 1 10 112456766556788999999998652 56678889999999
Q ss_pred CCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccc
Q 012474 304 SRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCF 383 (463)
Q Consensus 304 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~ 383 (463)
.+.+++|+.++... +.+..+ ++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|..
T Consensus 262 ~~~~~v~~~g~~~~---~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~ 328 (398)
T 3oti_A 262 VDADFVLALGDLDI---SPLGTL--------PRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDP 328 (398)
T ss_dssp SSSEEEEECTTSCC---GGGCSC--------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCT
T ss_pred CCCEEEEEECCcCh---hhhccC--------CCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCC
Confidence 89999998876421 112223 345599999999999999999 99999999999999999999999999
Q ss_pred cchhhhH--HHHHHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012474 384 GDQLVNA--RYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 460 (463)
Q Consensus 384 ~DQ~~na--~rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 460 (463)
.||..|| +++++ .|+|..++. .++++.|. ++++| ++++++++++++.+. ...+..+.++.+.+.+
T Consensus 329 ~dq~~~a~~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 329 RDQFQHTAREAVSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMV----ALPTPAETVRRIVERI 396 (398)
T ss_dssp TCCSSCTTHHHHHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 9999999 99999 599999988 77888877 88888 899999999999988 6777777777776654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.5e-35 Score=288.68 Aligned_cols=355 Identities=15% Similarity=0.207 Sum_probs=235.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeC-CCCCC--Cc--------c-----c
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSI-SESLW--ES--------E-----V 77 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~-~~~~~--~~--------~-----~ 77 (463)
+|||+|++.++.||++|++.|+++|.++||+|++++++........ .|+.+..+ +.... .. . .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG-AGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH-BTCEEEEC--------------CCSCCGGGGCT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh-CCCceeeecCCccchhhhhhhcccccccccccc
Confidence 5999999999999999999999999999999999997432111112 57888877 32110 00 0 0
Q ss_pred ccccHHHHHHHHHHhc----CchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHHHHHH
Q 012474 78 STENAISLLTVLNDKC----VVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFLAFSA 153 (463)
Q Consensus 78 ~~~~~~~~~~~~~~~~----~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 153 (463)
........+....... ...+.++.+.+.+ .+||+||+|...+++..+|+.+|||++.+...........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~-- 152 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-----WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGPF-- 152 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTHH--
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-----cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccccc--
Confidence 0011111121111111 0013333333333 6799999998778888999999999998765532111000
Q ss_pred HHHHHHhccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhc-----cCCceEEEcchhhhhH
Q 012474 154 FQILLEKGYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKT-----KACSGLIWNSFEDLEQ 228 (463)
Q Consensus 154 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le~ 228 (463)
.......+......+ ...+..+..+.++++.
T Consensus 153 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (391)
T 3tsa_A 153 --------------------------------------------SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQA 188 (391)
T ss_dssp --------------------------------------------HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSC
T ss_pred --------------------------------------------cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcC
Confidence 000111111111111 1125556666666554
Q ss_pred HHHHHhhhcCCCCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCccc--CC-HHHHHHHHHHHhcC-
Q 012474 229 TELTRLHKDFPIPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVV--VN-VTEFLEIAWGLANS- 304 (463)
Q Consensus 229 ~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~al~~~- 304 (463)
. ......++.++ |+.. ...+..|+...+++++|++++||... .. .+.+..++++ ++.
T Consensus 189 ~-----~~~~~~~~~~~-p~~~------------~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p 249 (391)
T 3tsa_A 189 S-----DAPQGAPVQYV-PYNG------------SGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELP 249 (391)
T ss_dssp T-----TSCCCEECCCC-CCCC------------CEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTST
T ss_pred C-----CCCccCCeeee-cCCC------------CcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCC
Confidence 2 11111223343 1111 11245676655678999999999854 23 6778888888 877
Q ss_pred CCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceecccccc
Q 012474 305 RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFG 384 (463)
Q Consensus 305 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~ 384 (463)
+.+++|+.++... +.+..+ ++|+.+.+|+|+.++|+.+++ ||||||.||+.||+++|+|+|++|...
T Consensus 250 ~~~~v~~~~~~~~---~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 316 (391)
T 3tsa_A 250 GVEAVIAVPPEHR---ALLTDL--------PDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYF 316 (391)
T ss_dssp TEEEEEECCGGGG---GGCTTC--------CTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCST
T ss_pred CeEEEEEECCcch---hhcccC--------CCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcc
Confidence 6788888765320 112223 355689999999999999999 999999999999999999999999999
Q ss_pred chhhhHHHHHHHhhceeecCC---ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012474 385 DQLVNARYVSHVWRVGLHLER---KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 460 (463)
Q Consensus 385 DQ~~na~rv~~~~G~G~~l~~---~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 460 (463)
||..|+.++++. |+|..++. ..+++.|.++|.++|+| ++++++++++++.+. +.++..++++.+.+.+
T Consensus 317 ~q~~~a~~~~~~-g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 387 (391)
T 3tsa_A 317 DQFDYARNLAAA-GAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEIT----AMPHPAALVRTLENTA 387 (391)
T ss_dssp THHHHHHHHHHT-TSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHH----TSCCHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHc-CCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHH
Confidence 999999999995 99999874 47999999999999999 789999999999887 6777777777766554
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=2.7e-33 Score=274.71 Aligned_cols=371 Identities=18% Similarity=0.170 Sum_probs=244.3
Q ss_pred hhhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcc---------
Q 012474 6 ESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESE--------- 76 (463)
Q Consensus 6 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------- 76 (463)
...+.+..+|||++++.++.||++|++.|+++|+++||+|++++++...... ...|+.+..++.......
T Consensus 12 ~~~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 12 SSGHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTL-RKLGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp ------CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HHTTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred ccCCcccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHH-HhcCCceeecCcccccchhhhhhhhhc
Confidence 3445667799999999999999999999999999999999999985321111 125888988874110000
Q ss_pred ---cccccHHH----HHHHHHHh-cCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHH
Q 012474 77 ---VSTENAIS----LLTVLNDK-CVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSF 148 (463)
Q Consensus 77 ---~~~~~~~~----~~~~~~~~-~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~ 148 (463)
....+... ....+... ....+..+.+.+.+ .+||+||+|...+++..+|+.+|+|++.+........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 165 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-----LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPD 165 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCS
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-----cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCch
Confidence 00000111 11111111 11112233333333 6799999998777788899999999998765532111
Q ss_pred HHHHHH----HHHHHhccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchh
Q 012474 149 LAFSAF----QILLEKGYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFE 224 (463)
Q Consensus 149 ~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 224 (463)
...... .........+.. . .......+.++..+..
T Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~------~-----------------------------------~~~~~~~d~~i~~~~~ 204 (412)
T 3otg_A 166 DLTRSIEEEVRGLAQRLGLDLP------P-----------------------------------GRIDGFGNPFIDIFPP 204 (412)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC------S-----------------------------------SCCGGGGCCEEECSCG
T ss_pred hhhHHHHHHHHHHHHHcCCCCC------c-----------------------------------ccccCCCCeEEeeCCH
Confidence 000000 000000000000 0 0001234566766666
Q ss_pred hhhHHHHHHhhhcCC---CCccccccccccccccCCCcccccchhccc-cccCCCCeEEEEecCCcccCCHHHHHHHHHH
Q 012474 225 DLEQTELTRLHKDFP---IPMFPIGPFHKYCLASSSSLLSQDQSCISW-LDKQAAKSVMYVSFGSIVVVNVTEFLEIAWG 300 (463)
Q Consensus 225 ~le~~~~~~~~~~~~---~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 300 (463)
.++... ..+. .++.++++- ......+| ....+++++|++++||......+.+..++++
T Consensus 205 ~~~~~~-----~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 266 (412)
T 3otg_A 205 SLQEPE-----FRARPRRHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDG 266 (412)
T ss_dssp GGSCHH-----HHTCTTEEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHH
T ss_pred HhcCCc-----ccCCCCcceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHH
Confidence 666431 1111 112222211 01113455 2323467899999999976677888999999
Q ss_pred HhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHHHHhhCCceecc
Q 012474 301 LANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQ 380 (463)
Q Consensus 301 l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~ 380 (463)
+++.+.+++|+.++.. ..+.+..++ +|+.+.+|+|+.++|+++++ ||+|||+||+.||+++|+|+|++
T Consensus 267 l~~~~~~~~~~~g~~~--~~~~l~~~~--------~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~ 334 (412)
T 3otg_A 267 LAGLDADVLVASGPSL--DVSGLGEVP--------ANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSF 334 (412)
T ss_dssp HHTSSSEEEEECCSSC--CCTTCCCCC--------TTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEEC
T ss_pred HHcCCCEEEEEECCCC--ChhhhccCC--------CcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEec
Confidence 9988889998887643 111122333 45589999999999999999 99999999999999999999999
Q ss_pred ccccchhhhHHHHHHHhhceeecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 012474 381 PCFGDQLVNARYVSHVWRVGLHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDH 459 (463)
Q Consensus 381 P~~~DQ~~na~rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~ 459 (463)
|...||..|++++++. |.|..++. .+++++|.++|.++++| +++++++.+.++++. +..+.++.++.+.+.
T Consensus 335 p~~~~q~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l 406 (412)
T 3otg_A 335 PWAGDSFANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA----AMPGPDEVVRLLPGF 406 (412)
T ss_dssp CCSTTHHHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HSCCHHHHHTTHHHH
T ss_pred CCchhHHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----cCCCHHHHHHHHHHH
Confidence 9999999999999995 99999988 78999999999999999 789999988888887 567888888877776
Q ss_pred Hh
Q 012474 460 IL 461 (463)
Q Consensus 460 ~~ 461 (463)
+.
T Consensus 407 ~~ 408 (412)
T 3otg_A 407 AS 408 (412)
T ss_dssp HC
T ss_pred hc
Confidence 54
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2.7e-30 Score=248.15 Aligned_cols=307 Identities=14% Similarity=0.104 Sum_probs=188.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCceEEeCCCCCCCcc---cccccHHHHHHHHH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSP-NPSNYPHFSFNSISESLWESE---VSTENAISLLTVLN 90 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 90 (463)
.||++...|+.||++|+++||++|.++||+|+|+++....+ ......|+.++.++..-.... .....+..++..+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~- 81 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSL- 81 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHH-
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHH-
Confidence 47888888777999999999999999999999999754321 111225788888773211111 0111122222111
Q ss_pred HhcCchHHHHHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcccccccc
Q 012474 91 DKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQVS 168 (463)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 168 (463)
....+-+.+ .+||+||++... ..+..+|+.+|+|++..-.. ..|..
T Consensus 82 -------~~~~~~l~~-----~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n------------------~~~G~-- 129 (365)
T 3s2u_A 82 -------FQALRVIRQ-----LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN------------------AVAGT-- 129 (365)
T ss_dssp -------HHHHHHHHH-----HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS------------------SSCCH--
T ss_pred -------HHHHHHHHh-----cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc------------------hhhhh--
Confidence 122222333 679999999654 34567889999999873211 11111
Q ss_pred CCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhcCCCCccccccc
Q 012474 169 FSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIGPF 248 (463)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl 248 (463)
.-++ . .+.++.++ .++++..+ .....+++|..
T Consensus 130 --------------------------------~nr~----l--~~~a~~v~-~~~~~~~~---------~~~k~~~~g~p 161 (365)
T 3s2u_A 130 --------------------------------ANRS----L--APIARRVC-EAFPDTFP---------ASDKRLTTGNP 161 (365)
T ss_dssp --------------------------------HHHH----H--GGGCSEEE-ESSTTSSC---------C---CEECCCC
T ss_pred --------------------------------HHHh----h--ccccceee-eccccccc---------CcCcEEEECCC
Confidence 0000 0 11123333 22322111 02236677744
Q ss_pred cccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcC----CCceEEEEcCCCCCCCccCC
Q 012474 249 HKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS----RVPFLWVVRPGLVPGVEWLE 324 (463)
Q Consensus 249 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~~ 324 (463)
...... . .. .......+++++|++..||.+... ..+.+.+++..+ +..++|.++... .+
T Consensus 162 vr~~~~---~---~~---~~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~------~~ 224 (365)
T 3s2u_A 162 VRGELF---L---DA---HARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH------AE 224 (365)
T ss_dssp CCGGGC---C---CT---TSSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT------HH
T ss_pred Cchhhc---c---ch---hhhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc------cc
Confidence 333211 0 00 111112235778999999987532 334455666654 334666655432 11
Q ss_pred CCchhHHHHhcCCCceeeccCh-hhhhcCCCCcccccccChhhHHHHHhhCCceeccccc----cchhhhHHHHHHHhhc
Q 012474 325 PLPKGFLEMLDGRGHIVKWAPQ-QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCF----GDQLVNARYVSHVWRV 399 (463)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~vpq-~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~rv~~~~G~ 399 (463)
.+.+ ..+..+.++.+..|+++ .++|+.+|+ +|||+|.+|++|++++|+|+|++|+. .+|..||+.+++. |+
T Consensus 225 ~~~~-~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~ 300 (365)
T 3s2u_A 225 ITAE-RYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GA 300 (365)
T ss_dssp HHHH-HHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TS
T ss_pred cccc-eecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CC
Confidence 1111 11334567788899998 679999999 99999999999999999999999974 5899999999995 99
Q ss_pred eeecCC-ccCHHHHHHHHHHHhccc
Q 012474 400 GLHLER-KFERREIETAIRRVTVEA 423 (463)
Q Consensus 400 G~~l~~-~~t~~~l~~~i~~~l~~~ 423 (463)
|..++. .+|++.|.++|.++++|+
T Consensus 301 a~~l~~~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 301 GRLLPQKSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHCT
T ss_pred EEEeecCCCCHHHHHHHHHHHHCCH
Confidence 999988 899999999999999994
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.1e-27 Score=202.91 Aligned_cols=159 Identities=25% Similarity=0.414 Sum_probs=134.7
Q ss_pred chhccccccCCCCeEEEEecCCccc-CCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceee
Q 012474 264 QSCISWLDKQAAKSVMYVSFGSIVV-VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVK 342 (463)
Q Consensus 264 ~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (463)
.++.+|++..+++++||+++||... .+.+.+..+++++++.+.+++|++++.. .+.+ ++|+.+.+
T Consensus 9 ~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~--------~~~v~~~~ 74 (170)
T 2o6l_A 9 KEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------PDTL--------GLNTRLYK 74 (170)
T ss_dssp HHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------CTTC--------CTTEEEES
T ss_pred HHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------cccC--------CCcEEEec
Confidence 4589999876677899999999864 5677889999999988899999887542 1123 34558999
Q ss_pred ccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCC-ccCHHHHHHHHHHHhc
Q 012474 343 WAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER-KFERREIETAIRRVTV 421 (463)
Q Consensus 343 ~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~-~~t~~~l~~~i~~~l~ 421 (463)
|+||.+++.|+.+++||||||+||++||+++|+|+|++|...||..||+++++ .|+|+.++. .++.++|.++|.++++
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~ 153 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRVIN 153 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHHHc
Confidence 99999999665555599999999999999999999999999999999999999 599999987 7899999999999999
Q ss_pred cchHHHHHHHHHHHHHHHH
Q 012474 422 EAEGQEMRERIMHLKEKLE 440 (463)
Q Consensus 422 ~~~~~~~~~~a~~~~~~~~ 440 (463)
| ++|+++++++++.++
T Consensus 154 ~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 154 D---PSYKENVMKLSRIQH 169 (170)
T ss_dssp C---HHHHHHHHHHC----
T ss_pred C---HHHHHHHHHHHHHhh
Confidence 9 789999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=6.2e-21 Score=183.47 Aligned_cols=338 Identities=12% Similarity=0.071 Sum_probs=203.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCCCCCceEEeCCCCCCCcccccccHHHHHHHHHHh
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSP-NPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDK 92 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (463)
.|||++++.+..||..+++.|+++|.++||+|++++...... ......|+.++.++....... .....+......
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~ 81 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGK----GIKALIAAPLRI 81 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTC----CHHHHHTCHHHH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCcC----ccHHHHHHHHHH
Confidence 389999998877999999999999999999999999854211 011114777777663211110 111111000000
Q ss_pred cCchHHHHHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhccccccccCC
Q 012474 93 CVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQVSFS 170 (463)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 170 (463)
. ..+..+.+.+.+ .+||+|+++... ..+..++...|+|++....... +..
T Consensus 82 ~-~~~~~l~~~l~~-----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------~~~---- 133 (364)
T 1f0k_A 82 F-NAWRQARAIMKA-----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------AGL---- 133 (364)
T ss_dssp H-HHHHHHHHHHHH-----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------------CCH----
T ss_pred H-HHHHHHHHHHHh-----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------------CcH----
Confidence 0 112222333333 579999998643 4456778889999986443210 000
Q ss_pred CCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhcCCCCccccccccc
Q 012474 171 SDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIGPFHK 250 (463)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~v~~vGpl~~ 250 (463)
.. .-....+|.+++.+... ++ ++..+|....
T Consensus 134 ------------------------------~~------~~~~~~~d~v~~~~~~~------------~~-~~~~i~n~v~ 164 (364)
T 1f0k_A 134 ------------------------------TN------KWLAKIATKVMQAFPGA------------FP-NAEVVGNPVR 164 (364)
T ss_dssp ------------------------------HH------HHHTTTCSEEEESSTTS------------SS-SCEECCCCCC
T ss_pred ------------------------------HH------HHHHHhCCEEEecChhh------------cC-CceEeCCccc
Confidence 00 00112345555543221 12 3445553221
Q ss_pred cccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcC--CCceEEEEcCCCCCCCccCCCCch
Q 012474 251 YCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS--RVPFLWVVRPGLVPGVEWLEPLPK 328 (463)
Q Consensus 251 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~v~~~~~~~~~~~~~~~~~~~ 328 (463)
...- . +.. ..+.+....++++|+++.|+.. .......++++++.+ +.++++.++.+. .+
T Consensus 165 ~~~~---~--~~~--~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~----------~~ 225 (364)
T 1f0k_A 165 TDVL---A--LPL--PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGS----------QQ 225 (364)
T ss_dssp HHHH---T--SCC--HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTC----------HH
T ss_pred hhhc---c--cch--hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCch----------HH
Confidence 1110 0 000 0111222234567888888875 344455566666554 345566665432 12
Q ss_pred hHHH---Hhc-CCCceeeccCh-hhhhcCCCCcccccccChhhHHHHHhhCCceeccccc---cchhhhHHHHHHHhhce
Q 012474 329 GFLE---MLD-GRGHIVKWAPQ-QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCF---GDQLVNARYVSHVWRVG 400 (463)
Q Consensus 329 ~~~~---~~~-~~~~~~~~vpq-~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~rv~~~~G~G 400 (463)
.+.+ ... +++.+.+|+++ .+++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+. |.|
T Consensus 226 ~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g 302 (364)
T 1f0k_A 226 SVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAA 302 (364)
T ss_dssp HHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSE
T ss_pred HHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcE
Confidence 2222 222 57888999965 889999999 99999999999999999999999987 7999999999995 999
Q ss_pred eecCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhcC
Q 012474 401 LHLER-KFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILSF 463 (463)
Q Consensus 401 ~~l~~-~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (463)
..++. +++.+++.++|.++ | ++.+++..+-+.... +..+.++.++++.+.++++
T Consensus 303 ~~~~~~d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 303 KIIEQPQLSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVARAL 357 (364)
T ss_dssp EECCGGGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTTC
T ss_pred EEeccccCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHHH
Confidence 98887 67799999999999 5 344433333332222 3556777888887777653
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.70 E-value=1.5e-16 Score=144.87 Aligned_cols=116 Identities=9% Similarity=0.060 Sum_probs=89.8
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHh--cCCCceeeccCh-hhhhc
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEML--DGRGHIVKWAPQ-QEVLA 351 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vpq-~~lL~ 351 (463)
+.+.|+|++|.... ......+++++.... ++.++++.+. ...+.+.+.. ..|+.+..|+++ .+++.
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~--------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN--------PNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC--------TTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc--------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 45689999997543 335667788887644 5666665542 1233333322 247888899998 57999
Q ss_pred CCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCC
Q 012474 352 HPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER 405 (463)
Q Consensus 352 ~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~ 405 (463)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.+++. |++..+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 9999 999999 89999999999999999999999999999995 99998875
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.65 E-value=2.8e-16 Score=137.19 Aligned_cols=131 Identities=13% Similarity=0.070 Sum_probs=96.3
Q ss_pred CCCeEEEEecCCcccCCHHHHHHH-----HHHHhcCC-CceEEEEcCCCCCCCccCCCCchhHHHHh-------------
Q 012474 274 AAKSVMYVSFGSIVVVNVTEFLEI-----AWGLANSR-VPFLWVVRPGLVPGVEWLEPLPKGFLEML------------- 334 (463)
Q Consensus 274 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~------------- 334 (463)
.++++|||+.||... -.+.+..+ +++|.+.+ .++++.++.... + ..+.+.+..
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~------~-~~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS------S-EFEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC------C-CCCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch------h-hHHHHHHhhhcccccccccccc
Confidence 457899999999843 34444444 48888777 788888886531 0 111111111
Q ss_pred -------------cC--CCceeeccCh-hhhhc-CCCCcccccccChhhHHHHHhhCCceeccccc----cchhhhHHHH
Q 012474 335 -------------DG--RGHIVKWAPQ-QEVLA-HPAVGGFWTHNGWNSTLESICEGVPMICQPCF----GDQLVNARYV 393 (463)
Q Consensus 335 -------------~~--~~~~~~~vpq-~~lL~-~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~rv 393 (463)
.. ++.+.+|+++ .++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 01 2345588887 58999 9999 99999999999999999999999984 4799999999
Q ss_pred HHHhhceeecCCccCHHHHHHHHHHH
Q 012474 394 SHVWRVGLHLERKFERREIETAIRRV 419 (463)
Q Consensus 394 ~~~~G~G~~l~~~~t~~~l~~~i~~~ 419 (463)
++. |+|+.+ +++.|.++|.++
T Consensus 176 ~~~-G~~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 176 VEL-GYVWSC----APTETGLIAGLR 196 (224)
T ss_dssp HHH-SCCCEE----CSCTTTHHHHHH
T ss_pred HHC-CCEEEc----CHHHHHHHHHHH
Confidence 995 998765 667788888777
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.45 E-value=2.9e-11 Score=118.82 Aligned_cols=370 Identities=13% Similarity=0.079 Sum_probs=188.1
Q ss_pred cCCCCcEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC---CCCCCceEEeCCCCCCCc
Q 012474 10 QQKKGRRVILFPL-----------PLQGHINPMLQLASILYSKGFSITIIHTNFNSPNP---SNYPHFSFNSISESLWES 75 (463)
Q Consensus 10 ~~~~~~~il~~~~-----------~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~ 75 (463)
...+.|||++++. ...|+-.....|++.|.++||+|++++........ ....++.++.++......
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~ 95 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEG 95 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSS
T ss_pred cCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCccc
Confidence 3466899999995 23478889999999999999999999975321111 112467777666321111
Q ss_pred ccccccHHHHHHHHHHhcCchHHHHHHH-HHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEeCchhHHHHHHH
Q 012474 76 EVSTENAISLLTVLNDKCVVPFQDCLAK-LISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFS 152 (463)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 152 (463)
. ...+....+..+ ....++. +... .+||+|++.... ..+..++..+|+|++..........
T Consensus 96 ~-~~~~~~~~~~~~-------~~~~~~~~~~~~----~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~---- 159 (438)
T 3c48_A 96 L-SKEELPTQLAAF-------TGGMLSFTRREK----VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK---- 159 (438)
T ss_dssp C-CGGGGGGGHHHH-------HHHHHHHHHHHT----CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH----
T ss_pred c-chhHHHHHHHHH-------HHHHHHHHHhcc----CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc----
Confidence 1 011111111111 1112222 2221 249999987532 2344567778999988666532110
Q ss_pred HHHHHHHhccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHH
Q 012474 153 AFQILLEKGYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELT 232 (463)
Q Consensus 153 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~ 232 (463)
....... . .........+ ....+..+|.+++.|....+.-
T Consensus 160 -------~~~~~~~------~----------------------~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~--- 199 (438)
T 3c48_A 160 -------NSYRDDS------D----------------------TPESEARRIC--EQQLVDNADVLAVNTQEEMQDL--- 199 (438)
T ss_dssp -------SCC----------C----------------------CHHHHHHHHH--HHHHHHHCSEEEESSHHHHHHH---
T ss_pred -------ccccccc------C----------------------CcchHHHHHH--HHHHHhcCCEEEEcCHHHHHHH---
Confidence 0000000 0 0000001111 1223456788888887765532
Q ss_pred HhhhcCC---CCccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcC-----
Q 012474 233 RLHKDFP---IPMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS----- 304 (463)
Q Consensus 233 ~~~~~~~---~~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----- 304 (463)
.+.++ .++..+..-.....- ..........+.+-+.- +.+..+++..|+... ...+..+++++..+
T Consensus 200 --~~~~g~~~~k~~vi~ngvd~~~~-~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p 273 (438)
T 3c48_A 200 --MHHYDADPDRISVVSPGADVELY-SPGNDRATERSRRELGI-PLHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDP 273 (438)
T ss_dssp --HHHHCCCGGGEEECCCCCCTTTS-CCC----CHHHHHHTTC-CSSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCT
T ss_pred --HHHhCCChhheEEecCCcccccc-CCcccchhhhhHHhcCC-CCCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCC
Confidence 12122 124444422211110 00000000002222221 123456677787653 22233333443332
Q ss_pred CCce-EEEEcCCCCCCCccCCCCchhHH---HH--hcCCCceeeccCh---hhhhcCCCCcccccc----cChhhHHHHH
Q 012474 305 RVPF-LWVVRPGLVPGVEWLEPLPKGFL---EM--LDGRGHIVKWAPQ---QEVLAHPAVGGFWTH----NGWNSTLESI 371 (463)
Q Consensus 305 ~~~~-v~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~vpq---~~lL~~~~~~~~I~h----gG~~s~~eal 371 (463)
+.++ ++.++.....+ ...+.+. +. ..+++.+.+|+|+ .+++..+++ +|.- |..+++.||+
T Consensus 274 ~~~~~l~i~G~~~~~g-----~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eam 346 (438)
T 3c48_A 274 DRNLRVIICGGPSGPN-----ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQ 346 (438)
T ss_dssp TCSEEEEEECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHH
T ss_pred CcceEEEEEeCCCCCC-----cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHH
Confidence 1133 23333311000 0112222 22 2367888999986 568888998 7754 3346899999
Q ss_pred hhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhhCCChH
Q 012474 372 CEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSY 450 (463)
Q Consensus 372 ~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~ 450 (463)
++|+|+|+.+. ......++.. +.|..++. -+.+++.++|.++++|++ ...+.+++++..+.+ +.+
T Consensus 347 a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~--------s~~ 412 (438)
T 3c48_A 347 ASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHARTF--------SWA 412 (438)
T ss_dssp HTTCCEEEESC----TTHHHHSCBT-TTEEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--------HHH
T ss_pred HcCCCEEecCC----CChhHHhhCC-CcEEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC--------CHH
Confidence 99999998763 4455566663 67887775 689999999999999843 334555555544443 356
Q ss_pred HHHHHHHHHHhc
Q 012474 451 QSLERLVDHILS 462 (463)
Q Consensus 451 ~~~~~~~~~~~~ 462 (463)
+.++++.+.+++
T Consensus 413 ~~~~~~~~~~~~ 424 (438)
T 3c48_A 413 ATAAQLSSLYND 424 (438)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666543
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.42 E-value=3e-11 Score=118.53 Aligned_cols=382 Identities=13% Similarity=0.061 Sum_probs=194.5
Q ss_pred CCcEEEEEcCC-----CccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------------------CCCCceEEeC
Q 012474 13 KGRRVILFPLP-----LQGHINPMLQLASILYSKGFSITIIHTNFNSPNPS-------------------NYPHFSFNSI 68 (463)
Q Consensus 13 ~~~~il~~~~~-----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~-------------------~~~g~~~~~~ 68 (463)
++|||++++.. ..|--.-+..|+++|+++||+|+++++........ ...|+.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 57999999843 33555668999999999999999999754322110 2246666666
Q ss_pred CCCCCCcccccccHHHH-HHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEeCchh
Q 012474 69 SESLWESEVSTENAISL-LTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSI 145 (463)
Q Consensus 69 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~~~~~ 145 (463)
+................ ...+.... ..+...+..+.... .+||+|.+.... ..+..++...|+|++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~ 156 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFG-RASVLLLNDLLREE---PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLN 156 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHH-HHHHHHHHHHTTTS---CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCC
T ss_pred cchhccccccccCCcchhhhhhHHHH-HHHHHHHHHHhccC---CCCeEEEecchhhhhhHHHHhhccCCCEEEEecccc
Confidence 54110000000001111 11111111 22333444442211 679999987643 2345666778999998766532
Q ss_pred HHHHHHHHHHHHHHhccccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhh
Q 012474 146 SSFLAFSAFQILLEKGYLAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFED 225 (463)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 225 (463)
...... ......... .... ...... .......+|.+++.|...
T Consensus 157 ~~~~~~----~~~~~~~~~-------------~~~~--------------~~~~~~------~~~~~~~ad~ii~~S~~~ 199 (439)
T 3fro_A 157 KSKLPA----FYFHEAGLS-------------ELAP--------------YPDIDP------EHTGGYIADIVTTVSRGY 199 (439)
T ss_dssp CCCEEH----HHHHHTTCG-------------GGCC--------------SSEECH------HHHHHHHCSEEEESCHHH
T ss_pred cccCch----HHhCccccc-------------cccc--------------cceeeH------hhhhhhhccEEEecCHHH
Confidence 100000 000000000 0000 000001 122334578888888766
Q ss_pred hhHHHHHHhhhcCCCCcccccc-ccccccccCCCcc-----cccchhccccccCCCCeEEEEecCCcc-c-CCHHHHHHH
Q 012474 226 LEQTELTRLHKDFPIPMFPIGP-FHKYCLASSSSLL-----SQDQSCISWLDKQAAKSVMYVSFGSIV-V-VNVTEFLEI 297 (463)
Q Consensus 226 le~~~~~~~~~~~~~~v~~vGp-l~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~-~~~~~~~~~ 297 (463)
.+.. ...... ...++..+.. +....-. .... .....+.+-+.- +++ .+++..|+.. . -..+.+...
T Consensus 200 ~~~~-~~~~~~-~~~~i~vi~ngvd~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a 273 (439)
T 3fro_A 200 LIDE-WGFFRN-FEGKITYVFNGIDCSFWN--ESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKA 273 (439)
T ss_dssp HHHT-HHHHGG-GTTSEEECCCCCCTTTSC--GGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHH
T ss_pred HHHH-hhhhhh-cCCceeecCCCCCchhcC--cccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHH
Confidence 6541 110000 1233333332 1111000 0000 011112222222 233 7777788876 3 334444444
Q ss_pred HHHHhcC----CCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChh---hhhcCCCCcccccc----cChhh
Q 012474 298 AWGLANS----RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQ---EVLAHPAVGGFWTH----NGWNS 366 (463)
Q Consensus 298 ~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~---~lL~~~~~~~~I~h----gG~~s 366 (463)
+..+... +.++++ ++.+. ....+.-....+..++++.+.+|+|+. +++..+++ +|.- |--++
T Consensus 274 ~~~l~~~~~~~~~~l~i-~G~g~----~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~ 346 (439)
T 3fro_A 274 IEILSSKKEFQEMRFII-IGKGD----PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLV 346 (439)
T ss_dssp HHHHHTSGGGGGEEEEE-ECCCC----HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHH
T ss_pred HHHHHhcccCCCeEEEE-EcCCC----hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHH
Confidence 4444442 233333 33321 000001112222333444556889874 47888888 7732 33479
Q ss_pred HHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhc-cch-HHHHHHHHHHHHHHHHHHHh
Q 012474 367 TLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTV-EAE-GQEMRERIMHLKEKLELSLL 444 (463)
Q Consensus 367 ~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~-~~~-~~~~~~~a~~~~~~~~~~~~ 444 (463)
+.||+++|+|+|+... ......++. |.|..++. -+.+++.++|.++++ |++ ...+.+++++..+
T Consensus 347 ~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~------- 412 (439)
T 3fro_A 347 ALEAMCLGAIPIASAV----GGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAM------- 412 (439)
T ss_dssp HHHHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH-------
T ss_pred HHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh-------
Confidence 9999999999998653 334444433 78887775 789999999999998 643 3445555544442
Q ss_pred hCCChHHHHHHHHHHHhcC
Q 012474 445 EAGSSYQSLERLVDHILSF 463 (463)
Q Consensus 445 ~~g~~~~~~~~~~~~~~~~ 463 (463)
.-+.+..++++.+.++++
T Consensus 413 -~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 413 -SFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp -TSCHHHHHHHHHHHHHTC
T ss_pred -hCcHHHHHHHHHHHHHHH
Confidence 356788888888887753
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.41 E-value=4.8e-12 Score=122.39 Aligned_cols=344 Identities=13% Similarity=0.042 Sum_probs=187.0
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC---CCCCCCCceEEeCCCCCCCcccccccHHH
Q 012474 12 KKGRRVILFPL--P--LQGHINPMLQLASILYSKGFSITIIHTNFNSP---NPSNYPHFSFNSISESLWESEVSTENAIS 84 (463)
Q Consensus 12 ~~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (463)
+++|||++++. + ..|.-..+..+++.| +||+|++++...... ......++.+..++....-. ..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-- 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLP-----TP-- 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCS-----CH--
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEcccccccc-----ch--
Confidence 56899999985 3 347888899999999 799999999854321 11122467777766422110 00
Q ss_pred HHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcc
Q 012474 85 LLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGY 162 (463)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 162 (463)
.....+.++.+. .+||+|++.... .....++..+|+|.+++........ ..
T Consensus 73 -----------~~~~~l~~~~~~----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-----------~~- 125 (394)
T 3okp_A 73 -----------TTAHAMAEIIRE----REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG-----------WS- 125 (394)
T ss_dssp -----------HHHHHHHHHHHH----TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH-----------HT-
T ss_pred -----------hhHHHHHHHHHh----cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh-----------hh-
Confidence 011122222222 679999976543 3345567889999555433321100 00
Q ss_pred ccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhcCC--C
Q 012474 163 LAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFP--I 240 (463)
Q Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~--~ 240 (463)
........ .......+|.+++.|....+.- .+.+. .
T Consensus 126 ----------------------------------~~~~~~~~---~~~~~~~~d~ii~~s~~~~~~~-----~~~~~~~~ 163 (394)
T 3okp_A 126 ----------------------------------MLPGSRQS---LRKIGTEVDVLTYISQYTLRRF-----KSAFGSHP 163 (394)
T ss_dssp ----------------------------------TSHHHHHH---HHHHHHHCSEEEESCHHHHHHH-----HHHHCSSS
T ss_pred ----------------------------------hcchhhHH---HHHHHHhCCEEEEcCHHHHHHH-----HHhcCCCC
Confidence 00001111 1223356788888887665532 22121 2
Q ss_pred CccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcC-----CCceEEEEcCC
Q 012474 241 PMFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPG 315 (463)
Q Consensus 241 ~v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~ 315 (463)
++..+..-.....- ..........+.+-+.- +++..+++..|+... ...+..++++++.+ +.++++ ++.+
T Consensus 164 ~~~vi~ngv~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g 238 (394)
T 3okp_A 164 TFEHLPSGVDVKRF-TPATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLI-VGSG 238 (394)
T ss_dssp EEEECCCCBCTTTS-CCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEE-ECCC
T ss_pred CeEEecCCcCHHHc-CCCCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEE-EcCc
Confidence 34444422211110 00000011112222222 234466777787643 22233344444332 344444 3332
Q ss_pred CCCCCccCCCCchhHH---HHhcCCCceeeccCh---hhhhcCCCCccccc-----------ccChhhHHHHHhhCCcee
Q 012474 316 LVPGVEWLEPLPKGFL---EMLDGRGHIVKWAPQ---QEVLAHPAVGGFWT-----------HNGWNSTLESICEGVPMI 378 (463)
Q Consensus 316 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~vpq---~~lL~~~~~~~~I~-----------hgG~~s~~eal~~GvP~l 378 (463)
. ..+.+. ....+++.+.+|+|+ .+++..+++ +|. -|.-+++.||+++|+|+|
T Consensus 239 ~---------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI 307 (394)
T 3okp_A 239 R---------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVI 307 (394)
T ss_dssp T---------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEE
T ss_pred h---------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEE
Confidence 1 122222 223467788999985 447888998 776 555679999999999999
Q ss_pred ccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHH
Q 012474 379 CQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLV 457 (463)
Q Consensus 379 ~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~ 457 (463)
+.+..+ ....+.. |.|...+. -+.+++.++|.++++|++ ...+.+++++. ++ +.-+.+..++++.
T Consensus 308 ~~~~~~----~~e~i~~--~~g~~~~~-~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~---~~----~~~s~~~~~~~~~ 373 (394)
T 3okp_A 308 AGTSGG----APETVTP--ATGLVVEG-SDVDKLSELLIELLDDPIRRAAMGAAGRAH---VE----AEWSWEIMGERLT 373 (394)
T ss_dssp ECSSTT----GGGGCCT--TTEEECCT-TCHHHHHHHHHHHHTCHHHHHHHHHHHHHH---HH----HHTBHHHHHHHHH
T ss_pred EeCCCC----hHHHHhc--CCceEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---HH----HhCCHHHHHHHHH
Confidence 977532 2233333 57777765 689999999999999832 22233333322 22 4567888889998
Q ss_pred HHHhcC
Q 012474 458 DHILSF 463 (463)
Q Consensus 458 ~~~~~~ 463 (463)
+.++++
T Consensus 374 ~~~~~~ 379 (394)
T 3okp_A 374 NILQSE 379 (394)
T ss_dssp HHHHSC
T ss_pred HHHHHh
Confidence 888764
No 28
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.35 E-value=1.2e-09 Score=105.65 Aligned_cols=347 Identities=13% Similarity=0.090 Sum_probs=179.0
Q ss_pred CcEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccccccHHHHHHHHHHh
Q 012474 14 GRRVILFPLPLQ-GHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDK 92 (463)
Q Consensus 14 ~~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (463)
+.++....+|.. |.-.....|+++|.++||+|++++............++.+..++.......... .. .+...
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~~--- 88 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYP--PY-DLALA--- 88 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSC--CH-HHHHH---
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccccc--cc-cHHHH---
Confidence 456777777754 677788899999999999999999853322112235677766552111000000 00 00000
Q ss_pred cCchHHHHHHHHHhCCCCCCCceEEEeCCchh--hHHHHHH-Hc--CCCeEEEeCchhHHHHHHHHHHHHHHhccccccc
Q 012474 93 CVVPFQDCLAKLISNGDQEEPVTCLITDAIWH--FAQTVAD-TL--RLPRIVLRTSSISSFLAFSAFQILLEKGYLAEQV 167 (463)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~--~~~~~A~-~~--giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 167 (463)
..+...+++ .+||+|++..... ....++. .+ ++|++........ ......
T Consensus 89 --~~l~~~l~~--------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--------------~~~~~~- 143 (394)
T 2jjm_A 89 --SKMAEVAQR--------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--------------TVLGSD- 143 (394)
T ss_dssp --HHHHHHHHH--------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--------------HTTTTC-
T ss_pred --HHHHHHHHH--------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--------------cccCCC-
Confidence 111222222 5699999875332 1233343 34 4898876554211 000000
Q ss_pred cCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHHHHhhccCCceEEEcchhhhhHHHHHHhhhcCC--CCcccc
Q 012474 168 SFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFP--IPMFPI 245 (463)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~--~~v~~v 245 (463)
.. .... ....+..+|.+++.|....+.- .+.++ .++..+
T Consensus 144 ----------------------------~~---~~~~---~~~~~~~ad~ii~~s~~~~~~~-----~~~~~~~~~~~vi 184 (394)
T 2jjm_A 144 ----------------------------PS---LNNL---IRFGIEQSDVVTAVSHSLINET-----HELVKPNKDIQTV 184 (394)
T ss_dssp ----------------------------TT---THHH---HHHHHHHSSEEEESCHHHHHHH-----HHHTCCSSCEEEC
T ss_pred ----------------------------HH---HHHH---HHHHHhhCCEEEECCHHHHHHH-----HHhhCCcccEEEe
Confidence 00 0111 1112345788888887655431 22222 234444
Q ss_pred ccccccccccCCCcccccchhccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhc----CCCceEEEEcCCCCCCCc
Q 012474 246 GPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLAN----SRVPFLWVVRPGLVPGVE 321 (463)
Q Consensus 246 Gpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~----~~~~~v~~~~~~~~~~~~ 321 (463)
..-.....- .. .....+.+-+.. +++..+++..|.... ...+..++++++. .+.+++ .++.+.
T Consensus 185 ~ngv~~~~~---~~-~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~----- 251 (394)
T 2jjm_A 185 YNFIDERVY---FK-RDMTQLKKEYGI-SESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLL-LVGDGP----- 251 (394)
T ss_dssp CCCCCTTTC---CC-CCCHHHHHHTTC-C---CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEE-EECCCT-----
T ss_pred cCCccHHhc---CC-cchHHHHHHcCC-CCCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEE-EECCch-----
Confidence 422211110 00 011112222221 123355666777653 2233334444433 234433 344321
Q ss_pred cCCCCchhHHHHh-----cCCCceeeccCh-hhhhcCCCCcccc----cccChhhHHHHHhhCCceeccccccchhhhHH
Q 012474 322 WLEPLPKGFLEML-----DGRGHIVKWAPQ-QEVLAHPAVGGFW----THNGWNSTLESICEGVPMICQPCFGDQLVNAR 391 (463)
Q Consensus 322 ~~~~~~~~~~~~~-----~~~~~~~~~vpq-~~lL~~~~~~~~I----~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 391 (463)
..+.+.+.. .+++.+.++..+ .+++..+++ +| .-|.-+++.||+++|+|+|+.+.. ....
T Consensus 252 ----~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e 321 (394)
T 2jjm_A 252 ----EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPE 321 (394)
T ss_dssp ----THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTT
T ss_pred ----HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHH
Confidence 112222221 356777787665 779999999 88 556668999999999999987753 2333
Q ss_pred HHHHHhhceeecCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 392 YVSHVWRVGLHLERKFERREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 392 rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
.++.. +.|...+. -+.+++.++|.++++|++ ...+.+++++.. .+.-+.++.++++.+.+++
T Consensus 322 ~v~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 322 VIQHG-DTGYLCEV-GDTTGVADQAIQLLKDEELHRNMGERARESV-------YEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp TCCBT-TTEEEECT-TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-------HHHSCHHHHHHHHHHHHHH
T ss_pred HhhcC-CceEEeCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHHH
Confidence 44442 57777764 688999999999999832 222333333322 2456678888888887765
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.34 E-value=2.1e-10 Score=111.25 Aligned_cols=339 Identities=11% Similarity=0.036 Sum_probs=177.6
Q ss_pred CCCcEEEEEcCC---C-ccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCC---CCceEEeCCCCCCCcccccccHHH
Q 012474 12 KKGRRVILFPLP---L-QGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNY---PHFSFNSISESLWESEVSTENAIS 84 (463)
Q Consensus 12 ~~~~~il~~~~~---~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~ 84 (463)
.+.|||+++... . .|.-.....+++.|.++||+|++++........... .+ .+..++.. . ....
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~----~----~~~~ 88 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYN----G----SVAR 88 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC------------------
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEecccc----C----Cccc
Confidence 458999999842 2 466688999999999999999999986433211110 01 11111100 0 0000
Q ss_pred HHHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEeCchhHHHHHHHHHHHHHHhcc
Q 012474 85 LLTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRTSSISSFLAFSAFQILLEKGY 162 (463)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 162 (463)
+ .........+.++.+. .+||+|++.... ..+..++...|+|++..........
T Consensus 89 ----~--~~~~~~~~~l~~~l~~----~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------- 144 (406)
T 2gek_A 89 ----L--RFGPATHRKVKKWIAE----GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS-------------- 144 (406)
T ss_dssp --------CCHHHHHHHHHHHHH----HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSH--------------
T ss_pred ----c--cccHHHHHHHHHHHHh----cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhh--------------
Confidence 0 0000011122222222 469999987644 2245567778999988665521100
Q ss_pred ccccccCCCCCCCccccCCCCCCCcCCCCccccCCCchHHHHHHH-HHhhccCCceEEEcchhhhhHHHHHHhhhcCCCC
Q 012474 163 LAEQVSFSSDSQLEKPVTELPPLRVKDIPIIVTHDTRNFHQLISA-VVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIP 241 (463)
Q Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~ 241 (463)
.....+.+ .......+|.+++.|....+.- .+.++..
T Consensus 145 -------------------------------------~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-----~~~~~~~ 182 (406)
T 2gek_A 145 -------------------------------------LTLSVFQGILRPYHEKIIGRIAVSDLARRWQ-----MEALGSD 182 (406)
T ss_dssp -------------------------------------HHHHHHHSTTHHHHTTCSEEEESSHHHHHHH-----HHHHSSC
T ss_pred -------------------------------------hhHHHHHHHHHHHHhhCCEEEECCHHHHHHH-----HHhcCCC
Confidence 00000000 1123466788888876655431 1222222
Q ss_pred -ccccccccccccccCCCcccccchhccccccCCCCeEEEEecCCc-cc-CCHHHHHHHHHHHhcC--CCceEEEEcCCC
Q 012474 242 -MFPIGPFHKYCLASSSSLLSQDQSCISWLDKQAAKSVMYVSFGSI-VV-VNVTEFLEIAWGLANS--RVPFLWVVRPGL 316 (463)
Q Consensus 242 -v~~vGpl~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~-~~-~~~~~~~~~~~al~~~--~~~~v~~~~~~~ 316 (463)
+ .+..-.....- ...+.. .. + ..+..+++..|+. .. -..+.+..++..+.+. +.+++ .++.+.
T Consensus 183 ~~-vi~~~v~~~~~---~~~~~~---~~-~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~~~ 250 (406)
T 2gek_A 183 AV-EIPNGVDVASF---ADAPLL---DG-Y---PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEIL-IVGRGD 250 (406)
T ss_dssp EE-ECCCCBCHHHH---HTCCCC---TT-C---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEE-EESCSC
T ss_pred cE-EecCCCChhhc---CCCchh---hh-c---cCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEE-EEcCCc
Confidence 3 34322111100 000000 00 0 1122466677876 42 2233333333333322 33433 344321
Q ss_pred CCCCccCCCCchhHHHHh---cCCCceeeccCh---hhhhcCCCCccccc----ccCh-hhHHHHHhhCCceeccccccc
Q 012474 317 VPGVEWLEPLPKGFLEML---DGRGHIVKWAPQ---QEVLAHPAVGGFWT----HNGW-NSTLESICEGVPMICQPCFGD 385 (463)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~vpq---~~lL~~~~~~~~I~----hgG~-~s~~eal~~GvP~l~~P~~~D 385 (463)
. +.+.+.. .+++.+.+|+++ .+++..+++ +|. +.|. +++.||+++|+|+|+.+.
T Consensus 251 ---------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~--- 315 (406)
T 2gek_A 251 ---------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL--- 315 (406)
T ss_dssp ---------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC---
T ss_pred ---------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC---
Confidence 1 3333222 467788899996 578889999 773 3344 599999999999998765
Q ss_pred hhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 386 QLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 386 Q~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
......+... +.|...+. -+.+++.++|.++++| +..++ ++++..++... .-+.++.++++.+.+++
T Consensus 316 -~~~~e~i~~~-~~g~~~~~-~d~~~l~~~i~~l~~~---~~~~~---~~~~~~~~~~~-~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 316 -DAFRRVLADG-DAGRLVPV-DDADGMAAALIGILED---DQLRA---GYVARASERVH-RYDWSVVSAQIMRVYET 382 (406)
T ss_dssp -HHHHHHHTTT-TSSEECCT-TCHHHHHHHHHHHHHC---HHHHH---HHHHHHHHHGG-GGBHHHHHHHHHHHHHH
T ss_pred -CcHHHHhcCC-CceEEeCC-CCHHHHHHHHHHHHcC---HHHHH---HHHHHHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 4566667763 77887765 6889999999999998 33332 22222222222 45667777777776654
No 30
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.27 E-value=1.4e-10 Score=110.04 Aligned_cols=125 Identities=12% Similarity=0.049 Sum_probs=83.6
Q ss_pred EEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChh---hhhcCCCC
Q 012474 279 MYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQ---EVLAHPAV 355 (463)
Q Consensus 279 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~---~lL~~~~~ 355 (463)
+++..|... +.+.+..++++++..+.+++++ +.+. ..+.-+.+.+...+++.+.+|+++. +++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW------EPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC------CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc------cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 455567755 3445667777777777776554 3321 0001122333444788999999964 78889998
Q ss_pred ccccc-------------ccC-hhhHHHHHhhCCceeccccccchhhhHHHHHH--HhhceeecCCccCHHHHHHHHHHH
Q 012474 356 GGFWT-------------HNG-WNSTLESICEGVPMICQPCFGDQLVNARYVSH--VWRVGLHLERKFERREIETAIRRV 419 (463)
Q Consensus 356 ~~~I~-------------hgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~--~~G~G~~l~~~~t~~~l~~~i~~~ 419 (463)
+|. +-| -+++.||+++|+|+|+... ..+...++. . +.|...+. +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~--d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF--APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC--CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC--CHHHHHHHHHHH
Confidence 762 233 4689999999999999875 345555655 4 56665554 999999999999
Q ss_pred hc
Q 012474 420 TV 421 (463)
Q Consensus 420 l~ 421 (463)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 86
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.27 E-value=1.1e-09 Score=104.82 Aligned_cols=129 Identities=18% Similarity=0.269 Sum_probs=89.1
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhcCCC----ce-EEEEcCCCCCCCccCCCCchhHH---HH--hcCCCceeeccC
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRV----PF-LWVVRPGLVPGVEWLEPLPKGFL---EM--LDGRGHIVKWAP 345 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~~-v~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~vp 345 (463)
+..+++..|+.. +...+..++++++.+.. .+ ++.++.+. .+.+. +. ..+++.+.++..
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~----------~~~~~~~~~~~~~~~~v~~~g~~~ 262 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK----------PRKFEALAEKLGVRSNVHFFSGRN 262 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC----------CHHHHHHHHHHTCGGGEEEESCCS
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC----------HHHHHHHHHHcCCCCcEEECCCcc
Confidence 446677778765 33456667777776532 22 33444321 12222 22 236778888766
Q ss_pred h-hhhhcCCCCccccc----ccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHh
Q 012474 346 Q-QEVLAHPAVGGFWT----HNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVT 420 (463)
Q Consensus 346 q-~~lL~~~~~~~~I~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l 420 (463)
+ .+++..+++ +|. -|.-+++.||+++|+|+|+.+. ..+...+++. +.|..++..-+.+++.++|.+++
T Consensus 263 ~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 263 DVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKAL 335 (374)
T ss_dssp CHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHH
T ss_pred cHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHH
Confidence 5 778999998 775 4566899999999999999765 3556778884 89998874478999999999999
Q ss_pred ccc
Q 012474 421 VEA 423 (463)
Q Consensus 421 ~~~ 423 (463)
+|+
T Consensus 336 ~~~ 338 (374)
T 2iw1_A 336 TQS 338 (374)
T ss_dssp HCH
T ss_pred cCh
Confidence 983
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.26 E-value=1e-10 Score=112.68 Aligned_cols=129 Identities=13% Similarity=0.119 Sum_probs=84.3
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcC-----CCceEEEEcCCCCCCCccCCCCchhHHHHh--cCCCceeeccCh-
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVPGVEWLEPLPKGFLEML--DGRGHIVKWAPQ- 346 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vpq- 346 (463)
+++.++++.|...... +.+..+++++..+ +.++++..+.+. ..-+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--------NVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--------HHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4567888888755321 3345555555432 334444323210 0112222222 257778666664
Q ss_pred --hhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 347 --QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 347 --~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
.+++..+++ +|+.+| +++.||+++|+|+|+.+..++.. .+.+. |.|..++. ++++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVGT--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEECS--SHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeCC--CHHHHHHHHHHHHhC
Confidence 668999999 999986 45889999999999998754433 24554 88888865 899999999999998
No 33
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.24 E-value=1e-10 Score=112.39 Aligned_cols=128 Identities=9% Similarity=0.064 Sum_probs=82.8
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcC-----CCceEEEEcCCCCCCCccCCCCchhHHHHh--cCCCceeeccCh-
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVPGVEWLEPLPKGFLEML--DGRGHIVKWAPQ- 346 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vpq- 346 (463)
+++.|+++.|...... .+..++++++.+ +.++++..+.+. .+-+.+.+.. .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--------VVREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--------HHHHHHHHHhccCCCEEEECCCCHH
Confidence 3557777777543221 344455555432 344444434221 0112222221 247777765554
Q ss_pred --hhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 347 --QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 347 --~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
.+++..+++ ||+.+| |.+.||+++|+|+|+.+..+++.. +.+. |.|..++ .++++|.++|.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~--~d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG--TDPEGVYRVVKGLLEN 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC--SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC--CCHHHHHHHHHHHHhC
Confidence 589999999 999884 446699999999999887666655 3454 8888775 4899999999999998
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.23 E-value=1.8e-09 Score=107.92 Aligned_cols=168 Identities=11% Similarity=0.081 Sum_probs=100.3
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHhcCCC----c-eEEEEcCCCCCCCccCCCC-------chhHHHH-----hcCCCc
Q 012474 277 SVMYVSFGSIVVVNVTEFLEIAWGLANSRV----P-FLWVVRPGLVPGVEWLEPL-------PKGFLEM-----LDGRGH 339 (463)
Q Consensus 277 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~v~~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~ 339 (463)
..+++..|... ..+.+..+++++..+.. . .++.++....+..+ +..+ -+.+.+. ..+++.
T Consensus 262 ~~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~-y~~l~~~~~~y~~~l~~~~~~~~l~~~V~ 338 (499)
T 2r60_A 262 LPAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFED-YSRAGQEEKEILGKIIELIDNNDCRGKVS 338 (499)
T ss_dssp SCEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTB-CTTSCHHHHHHHHHHHHHHHHTTCBTTEE
T ss_pred CcEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccc-cccccccchHHHHHHHHHHHhcCCCceEE
Confidence 35667778764 34456667777766532 2 34455542111000 0001 1222222 246788
Q ss_pred eeeccCh---hhhhcCC----CCcccccc----cChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccC
Q 012474 340 IVKWAPQ---QEVLAHP----AVGGFWTH----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFE 408 (463)
Q Consensus 340 ~~~~vpq---~~lL~~~----~~~~~I~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t 408 (463)
+.+++|+ ..++..+ ++ +|.- |--.++.||+++|+|+|+... ......+... +.|..++. -+
T Consensus 339 ~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~-~d 410 (499)
T 2r60_A 339 MFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP-ED 410 (499)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-TC
T ss_pred ECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-CC
Confidence 8999985 4578888 88 7732 333689999999999998763 3445555552 57887775 78
Q ss_pred HHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 409 RREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 409 ~~~l~~~i~~~l~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
.+++.++|.++++|++ ...+.+++++..+ +.-+.++.++++.+.+++
T Consensus 411 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 411 PEDIARGLLKAFESEETWSAYQEKGKQRVE-------ERYTWQETARGYLEVIQE 458 (499)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHH-------HHSBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHH
Confidence 9999999999999832 2223333332222 345667777777766653
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.22 E-value=1.2e-10 Score=112.67 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=60.9
Q ss_pred CCCceeeccCh---hhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHH
Q 012474 336 GRGHIVKWAPQ---QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREI 412 (463)
Q Consensus 336 ~~~~~~~~vpq---~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l 412 (463)
+++.+++++++ ..+++.+++ +|+..|..+ .||.++|+|+|++|-.+++.. +.+. |.|..+.. ++++|
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~--d~~~l 351 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT--NKENL 351 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS--CHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC--CHHHH
Confidence 57788888873 568889998 998875333 799999999999976666554 2454 98876653 89999
Q ss_pred HHHHHHHhcc
Q 012474 413 ETAIRRVTVE 422 (463)
Q Consensus 413 ~~~i~~~l~~ 422 (463)
.+++.++++|
T Consensus 352 ~~ai~~ll~~ 361 (403)
T 3ot5_A 352 IKEALDLLDN 361 (403)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHcC
Confidence 9999999998
No 36
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.20 E-value=1.2e-10 Score=112.57 Aligned_cols=158 Identities=10% Similarity=0.075 Sum_probs=95.3
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcC-----CCceEEEEcCCCCCCCccCCCCchhHHHH--hcCCCceeeccC--
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANS-----RVPFLWVVRPGLVPGVEWLEPLPKGFLEM--LDGRGHIVKWAP-- 345 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~vp-- 345 (463)
++++|+++.+-...... .+..++++++.+ +.++++.++.+. + +-+.+.+. ..+++.+.++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~----~----~~~~l~~~~~~~~~v~~~~~lg~~ 299 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP----N----VREPVNKLLKGVSNIVLIEPQQYL 299 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH----H----HHHHHHHHTTTCTTEEEECCCCHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh----H----HHHHHHHHHcCCCCEEEeCCCCHH
Confidence 46677776532222221 245566666543 345555443211 0 11223222 135777877775
Q ss_pred -hhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhccch
Q 012474 346 -QQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAE 424 (463)
Q Consensus 346 -q~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~ 424 (463)
...+++.+++ +|+-.| |.+.||.++|+|+|++.-..+++ .+.+. |.++.+. .++++|.+++.++++|
T Consensus 300 ~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~--~d~~~l~~ai~~ll~d-- 367 (396)
T 3dzc_A 300 PFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVG--TNQQQICDALSLLLTD-- 367 (396)
T ss_dssp HHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECT--TCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcC--CCHHHHHHHHHHHHcC--
Confidence 3578889999 999988 66689999999999975555543 24454 8876554 3799999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 425 GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 425 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
+..++ +|++..+ . -+..++.+++++.|++
T Consensus 368 -~~~~~---~m~~~~~----~-~~~~~aa~ri~~~l~~ 396 (396)
T 3dzc_A 368 -PQAYQ---AMSQAHN----P-YGDGKACQRIADILAK 396 (396)
T ss_dssp -HHHHH---HHHTSCC----T-TCCSCHHHHHHHHHHC
T ss_pred -HHHHH---HHhhccC----C-CcCChHHHHHHHHHhC
Confidence 44443 3333222 1 2345667777777654
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.17 E-value=4.8e-10 Score=107.61 Aligned_cols=163 Identities=11% Similarity=0.099 Sum_probs=95.7
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcC---CCceEEEEcCCCCCCCccCCCCchhHHHHhc--CCCceeeccCh---
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANS---RVPFLWVVRPGLVPGVEWLEPLPKGFLEMLD--GRGHIVKWAPQ--- 346 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~vpq--- 346 (463)
+++.++++.|...... +.+..++++++.+ ..++.+.++.+. . ..+-+.+.+... +++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~--~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHM--N----PVVRETANDILGDYGRIHLIEPLDVIDF 276 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCS--C----HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCC--C----HHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence 4567777887654321 3455666666543 112223333221 0 001122222223 57788777764
Q ss_pred hhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhccchHH
Q 012474 347 QEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAEGQ 426 (463)
Q Consensus 347 ~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~~~ 426 (463)
..++..+++ +|+..| +.+.||+++|+|+|+....+.. ..+.+. |.|..++. +++++.++|.++++| +
T Consensus 277 ~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~~--d~~~la~~i~~ll~~---~ 343 (375)
T 3beo_A 277 HNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAGT--DEETIFSLADELLSD---K 343 (375)
T ss_dssp HHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECCS--CHHHHHHHHHHHHHC---H
T ss_pred HHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcCC--CHHHHHHHHHHHHhC---h
Confidence 568889999 998874 5588999999999998543333 223454 88887763 899999999999998 4
Q ss_pred HHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012474 427 EMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 427 ~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (463)
+.+++ |++..++ ..+..+.++.++.+.+.++
T Consensus 344 ~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 344 EAHDK---MSKASNP-YGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHH---HCCCCCT-TCCSCHHHHHHHHHHHHTT
T ss_pred HhHhh---hhhcCCC-CCCCcHHHHHHHHHHHHhh
Confidence 43332 2222211 1134555666666655543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.11 E-value=5e-09 Score=102.01 Aligned_cols=112 Identities=13% Similarity=0.085 Sum_probs=78.4
Q ss_pred cCCCceeeccC-----h-hhhhcCCCCccccccc----ChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecC
Q 012474 335 DGRGHIVKWAP-----Q-QEVLAHPAVGGFWTHN----GWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLE 404 (463)
Q Consensus 335 ~~~~~~~~~vp-----q-~~lL~~~~~~~~I~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 404 (463)
.+++.+.+|++ + .+++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...++.. +.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 36788888776 2 457888888 77543 45789999999999998764 3456666663 6787776
Q ss_pred CccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhcC
Q 012474 405 RKFERREIETAIRRVTVEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILSF 463 (463)
Q Consensus 405 ~~~t~~~l~~~i~~~l~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (463)
+.+++.++|.++++|++ ...+.+++++. + .+.-+.+..++++.+.++++
T Consensus 365 ---d~~~la~~i~~ll~~~~~~~~~~~~a~~~---~----~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKHPEVSKEMGAKAKER---V----RKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp ---SHHHHHHHHHHHHHCHHHHHHHHHHHHHH---H----HHHTBHHHHHHHHHHHHHTC
T ss_pred ---CHHHHHHHHHHHHhCHHHHHHHHHHHHHH---H----HHHcCHHHHHHHHHHHHHHh
Confidence 88999999999999832 22223333222 2 24556788888888887753
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.80 E-value=1.5e-07 Score=97.81 Aligned_cols=168 Identities=13% Similarity=0.099 Sum_probs=93.9
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhcCC-----CceEEEEcCCCCCCCccCC--CCchhHH---HH--hcCCCceee-
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLANSR-----VPFLWVVRPGLVPGVEWLE--PLPKGFL---EM--LDGRGHIVK- 342 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~v~~~~~~~~~~~~~~~--~~~~~~~---~~--~~~~~~~~~- 342 (463)
+..+++..|... +.+.+..+++|+..+. .+++++ +++...+....+ +.-+.+. ++ +.+++.+.+
T Consensus 571 ~~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIv-G~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~ 647 (816)
T 3s28_A 571 KKPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVV-GGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISS 647 (816)
T ss_dssp TSCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEE-CCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECC
T ss_pred CCeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEE-eCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccC
Confidence 446677778765 3445666666666542 344443 332200000000 0001111 11 236667776
Q ss_pred ---ccChhhhhc----CCCCcccccc----cChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHH
Q 012474 343 ---WAPQQEVLA----HPAVGGFWTH----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERRE 411 (463)
Q Consensus 343 ---~vpq~~lL~----~~~~~~~I~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~ 411 (463)
++|+.++.. .+++ +|.- |--.++.||+++|+|+|+. |.......+... +.|..++. -++++
T Consensus 648 ~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-~D~e~ 719 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-YHGDQ 719 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-TSHHH
T ss_pred ccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-CCHHH
Confidence 444455444 4566 6632 3347999999999999986 444455666663 67888775 78899
Q ss_pred HHHHHHHHh----ccch-HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012474 412 IETAIRRVT----VEAE-GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 412 l~~~i~~~l----~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (463)
++++|.+++ .|++ ...+.+++++ ...+.-+-+..++++++...
T Consensus 720 LA~aI~~lL~~Ll~d~~~~~~m~~~ar~-------~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 720 AADTLADFFTKCKEDPSHWDEISKGGLQ-------RIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHHHH-------HHHHSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHH-------HHHHhCCHHHHHHHHHHHHH
Confidence 999997776 6632 2223333322 22245667777777777554
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.73 E-value=2.3e-08 Score=95.81 Aligned_cols=128 Identities=12% Similarity=0.074 Sum_probs=82.2
Q ss_pred CeEEEEecCCcccCC-HHHHHHHHHHHhcC----CCceEEEEcCCCCCCCccCCCCchhHHHH---h--cCCCceeeccC
Q 012474 276 KSVMYVSFGSIVVVN-VTEFLEIAWGLANS----RVPFLWVVRPGLVPGVEWLEPLPKGFLEM---L--DGRGHIVKWAP 345 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~vp 345 (463)
++.|+++.|...... .+.+..+++++..+ +..+|+...+. +.+.+.+. . .+|+.+.+.++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~----------~~~~l~~~~~~~~~~~~v~l~~~lg 272 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR----------TKKRLEDLEGFKELGDKIRFLPAFS 272 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----------HHHHHHTSGGGGGTGGGEEECCCCC
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----------HHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 568888887654322 24456666766543 45666654321 11112111 1 24556655554
Q ss_pred ---hhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 346 ---QQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 346 ---q~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
...+++.+++ +|+-.|. .+.||.+.|+|+|+++-..+-+. ..++ |.++.+. .+++.|.+++.++++|
T Consensus 273 ~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~--~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 273 FTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG--FKAERVLQAVKTITEE 342 (385)
T ss_dssp HHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC--SSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC--CCHHHHHHHHHHHHhC
Confidence 4578999999 9999875 46999999999999987544221 2454 8776654 4899999999999998
Q ss_pred c
Q 012474 423 A 423 (463)
Q Consensus 423 ~ 423 (463)
+
T Consensus 343 ~ 343 (385)
T 4hwg_A 343 H 343 (385)
T ss_dssp C
T ss_pred h
Confidence 4
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.67 E-value=3.4e-06 Score=81.70 Aligned_cols=109 Identities=11% Similarity=0.020 Sum_probs=72.0
Q ss_pred CceeeccCh---hhhhcCCCCccccc----ccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhc-----------
Q 012474 338 GHIVKWAPQ---QEVLAHPAVGGFWT----HNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRV----------- 399 (463)
Q Consensus 338 ~~~~~~vpq---~~lL~~~~~~~~I~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~----------- 399 (463)
+.+.+|+|+ .+++..+++ +|. -|.-.++.||+++|+|+|+... ......+.. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHcc--Ccccccccccccc
Confidence 455589984 457888888 773 2334689999999999998653 233444433 33
Q ss_pred -----ee--ecCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 400 -----GL--HLERKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 400 -----G~--~l~~~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
|. .++. -+.+++.++| ++++| ++.+ +++++..++...+.-+.++.++++.+.+++
T Consensus 328 ~~~~~G~~gl~~~-~d~~~la~~i-~l~~~---~~~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-IDVDDLVEAF-TFFKD---EKNR---KEYGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp CTTTCSSCCEEEE-CCHHHHHHHH-HHTTS---HHHH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC-CCHHHHHHHH-HHhcC---HHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44 4443 5899999999 99998 4433 223333333233566788888888887764
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.66 E-value=7.8e-07 Score=88.28 Aligned_cols=161 Identities=11% Similarity=-0.017 Sum_probs=93.2
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHhc---CCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCc-eeeccCh--hhhhc
Q 012474 278 VMYVSFGSIVVVNVTEFLEIAWGLAN---SRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGH-IVKWAPQ--QEVLA 351 (463)
Q Consensus 278 ~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vpq--~~lL~ 351 (463)
.+++..|.... .+.+..+++++.. .+.+++++-.+.. . +.+.-....+...+++. +.++... ..++.
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~----~-~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGDV----A-LEGALLAAASRHHGRVGVAIGYNEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBCH----H-HHHHHHHHHHHTTTTEEEEESCCHHHHHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCch----H-HHHHHHHHHHhCCCcEEEecCCCHHHHHHHHh
Confidence 47777888763 2333344444433 3556555443210 0 00001122223346776 5677333 36788
Q ss_pred CCCCccccc----ccChhhHHHHHhhCCceeccccccchhhhHHHHHHHh---------hceeecCCccCHHHHHHHHHH
Q 012474 352 HPAVGGFWT----HNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVW---------RVGLHLERKFERREIETAIRR 418 (463)
Q Consensus 352 ~~~~~~~I~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~---------G~G~~l~~~~t~~~l~~~i~~ 418 (463)
.+++ +|. -|.-.++.||+++|+|+|+... ......+.. - +.|..++. -+.+++.++|.+
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i~~ 436 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-VTLDGLKQAIRR 436 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-CCHHHHHHHHHH
Confidence 9998 773 2334689999999999999764 233444433 2 46777764 688999999999
Q ss_pred Hh---ccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 419 VT---VEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 419 ~l---~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
++ +| +..++ ++++..++ +.-+.+..++++.+..++
T Consensus 437 ll~~~~~---~~~~~---~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 437 TVRYYHD---PKLWT---QMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHTC---HHHHH---HHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred HHHHhCC---HHHHH---HHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 99 67 33332 22222221 466777778887776654
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.62 E-value=1e-06 Score=87.51 Aligned_cols=163 Identities=10% Similarity=-0.005 Sum_probs=93.9
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhc---CCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCc-eeeccCh--hhh
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLAN---SRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGH-IVKWAPQ--QEV 349 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vpq--~~l 349 (463)
+..+++..|.... .+.+..++++++. .+.+++++-.+.. . ..+.-....+...+++. +.++... ..+
T Consensus 291 ~~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~----~-~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~ 363 (485)
T 2qzs_A 291 KVPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDP----V-LQEGFLAAAAEYPGQVGVQIGYHEAFSHRI 363 (485)
T ss_dssp TSCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECH----H-HHHHHHHHHHHSTTTEEEEESCCHHHHHHH
T ss_pred CCeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCch----H-HHHHHHHHHHhCCCcEEEeCCCCHHHHHHH
Confidence 3456666776543 2334444444443 3556555443210 0 00001112223335675 5677333 367
Q ss_pred hcCCCCcccccc----cChhhHHHHHhhCCceeccccccchhhhHHHHHHHh---------hceeecCCccCHHHHHHHH
Q 012474 350 LAHPAVGGFWTH----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVW---------RVGLHLERKFERREIETAI 416 (463)
Q Consensus 350 L~~~~~~~~I~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~---------G~G~~l~~~~t~~~l~~~i 416 (463)
+..+++ +|.- |.-+++.||+++|+|+|+... ......+.. - +.|..++. -+.+++.++|
T Consensus 364 ~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i 435 (485)
T 2qzs_A 364 MGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-SNAWSLLRAI 435 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-SSHHHHHHHH
T ss_pred HHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-CCHHHHHHHH
Confidence 889998 7732 334688999999999998754 234444443 1 36777765 6899999999
Q ss_pred HHHh---ccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 417 RRVT---VEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 417 ~~~l---~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
.+++ .| +..++ ++++..++ +.-+.+..++++.+.+++
T Consensus 436 ~~ll~~~~~---~~~~~---~~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 436 RRAFVLWSR---PSLWR---FVQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp HHHHHHHTS---HHHHH---HHHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC---HHHHH---HHHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 9999 66 33332 22222222 567778888888877654
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.58 E-value=2.4e-05 Score=79.19 Aligned_cols=116 Identities=9% Similarity=0.045 Sum_probs=77.4
Q ss_pred CCCceeeccCh---hhhhcCCCCcccc---cccChhhHHHHHhhCCceeccccccchhhh-HHHHHHHhhceeecCCccC
Q 012474 336 GRGHIVKWAPQ---QEVLAHPAVGGFW---THNGWNSTLESICEGVPMICQPCFGDQLVN-ARYVSHVWRVGLHLERKFE 408 (463)
Q Consensus 336 ~~~~~~~~vpq---~~lL~~~~~~~~I---~hgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~rv~~~~G~G~~l~~~~t 408 (463)
+++.+.+++|+ ..++..+++ || ..|+.+++.||+++|+|+|++|-..=..+. +..+.. .|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 56788899984 457888888 76 236678999999999999998743211222 455666 477655543 8
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH--hhCCChHHHHHHHHHHHhc
Q 012474 409 RREIETAIRRVTVEAEGQEMRERIMHLKEKLELSL--LEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 409 ~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~ 462 (463)
++++.+++.++++| +..++ ++++..++.. .+..+.+..++++.+.+++
T Consensus 509 ~~~la~~i~~l~~~---~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALT---ALHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999998 43332 2333332222 2456677777777766553
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.41 E-value=4e-07 Score=77.13 Aligned_cols=129 Identities=10% Similarity=0.053 Sum_probs=87.3
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHhcC-CCceEEEEcCCCCCCCccCCCCchhH---HHHhcCCCceeeccCh---hhhh
Q 012474 278 VMYVSFGSIVVVNVTEFLEIAWGLANS-RVPFLWVVRPGLVPGVEWLEPLPKGF---LEMLDGRGHIVKWAPQ---QEVL 350 (463)
Q Consensus 278 ~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~vpq---~~lL 350 (463)
.+++..|+.. ....+..++++++.+ +.+++++-.+.. .+.+-+-+ .....+|+.+.+|+++ ..++
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~------~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFSK------GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY 95 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCT------TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCcc------HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH
Confidence 4455677765 344566777777776 445555433221 11122222 1124568899999997 6788
Q ss_pred cCCCCccccc---ccCh-hhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhccc
Q 012474 351 AHPAVGGFWT---HNGW-NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEA 423 (463)
Q Consensus 351 ~~~~~~~~I~---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~ 423 (463)
..+++ +|. +.|. .++.||+++|+|+|+... ..+...++.. +.|..+ . -+.+++.++|.++++|+
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-ADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-SCHHHHHHHHHHHHHCT
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-CCHHHHHHHHHHHHhCH
Confidence 89998 776 3344 599999999999998753 4556666663 678777 3 78999999999999884
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.38 E-value=1.2e-05 Score=77.67 Aligned_cols=74 Identities=11% Similarity=0.016 Sum_probs=57.0
Q ss_pred CCCceeeccChh---hhhcCCCCccccc---ccCh-hhHHHHH-------hhCCceeccccccchhhhHHHHHHHhhcee
Q 012474 336 GRGHIVKWAPQQ---EVLAHPAVGGFWT---HNGW-NSTLESI-------CEGVPMICQPCFGDQLVNARYVSHVWRVGL 401 (463)
Q Consensus 336 ~~~~~~~~vpq~---~lL~~~~~~~~I~---hgG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~ 401 (463)
+|+.+.+++|+. +++..+++ +|. +.|. +++.||+ ++|+|+|+... +... ..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 455889999864 57888998 663 3343 6789999 99999999865 5553 5677
Q ss_pred e-cCCccCHHHHHHHHHHHhccc
Q 012474 402 H-LERKFERREIETAIRRVTVEA 423 (463)
Q Consensus 402 ~-l~~~~t~~~l~~~i~~~l~~~ 423 (463)
. ++. -+++++.++|.++++|+
T Consensus 332 l~v~~-~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 332 FGYTP-GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEECT-TCHHHHHHHHHHHHHCC
T ss_pred EEeCC-CCHHHHHHHHHHHHhCc
Confidence 6 664 68999999999999874
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.38 E-value=1.6e-05 Score=75.85 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=70.2
Q ss_pred CceeeccCh-hhhhcCCCCcccccc-----cChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHH
Q 012474 338 GHIVKWAPQ-QEVLAHPAVGGFWTH-----NGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERRE 411 (463)
Q Consensus 338 ~~~~~~vpq-~~lL~~~~~~~~I~h-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~ 411 (463)
+++.++..+ ..++..+++ ++.- +|..++.||+++|+|+|+-|..++.......+... |.++.. -++++
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~---~d~~~ 335 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV---KNETE 335 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC---CSHHH
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe---CCHHH
Confidence 444455554 668888887 6542 23478999999999999877777777766666664 877755 36799
Q ss_pred HHHHHHHHhccch-HHHHHHHHHHHHHHHH
Q 012474 412 IETAIRRVTVEAE-GQEMRERIMHLKEKLE 440 (463)
Q Consensus 412 l~~~i~~~l~~~~-~~~~~~~a~~~~~~~~ 440 (463)
|.++|.++++| + ...|.+++++..+.-.
T Consensus 336 La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 336 LVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 99999999988 5 5678888877665443
No 48
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.07 E-value=0.001 Score=66.42 Aligned_cols=167 Identities=14% Similarity=0.118 Sum_probs=92.3
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhc---CCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccCh---hhh
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLAN---SRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQ---QEV 349 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq---~~l 349 (463)
+.++++..|.... .+.+..+++++.+ .+.+++++..+.. . ....-....+..+.++.+..+.++ ..+
T Consensus 326 ~~p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~----~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 326 KIPLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKK----K-FEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp TSCEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCH----H-HHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CCcEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCc----h-HHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 4456666777653 3344455555543 4556555443321 0 000112223345567777766665 347
Q ss_pred hcCCCCcccccc---cCh-hhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCC---------ccCHHHHHHHH
Q 012474 350 LAHPAVGGFWTH---NGW-NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLER---------KFERREIETAI 416 (463)
Q Consensus 350 L~~~~~~~~I~h---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~---------~~t~~~l~~~i 416 (463)
++.+++ ||.= =|. .++.||+++|+|+|+.... .....|.+. .-|..... ..+.++|.++|
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai 471 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATL 471 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHH
Confidence 888888 7743 233 5899999999999986542 333444432 33332211 35678999999
Q ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhcC
Q 012474 417 RRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILSF 463 (463)
Q Consensus 417 ~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (463)
++++...+.+.+++ ..++++...-|=++.+++..+.++++
T Consensus 472 ~ral~~~~~~~~~~-------~~~~am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 472 KRAIKVVGTPAYEE-------MVRNCMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HHHHHHTTSHHHHH-------HHHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred HHHHHhcCcHHHHH-------HHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 98875211133332 22233335566677777777776653
No 49
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.88 E-value=0.00027 Score=68.27 Aligned_cols=79 Identities=11% Similarity=0.040 Sum_probs=56.5
Q ss_pred CCCceeeccCh---hhhhcCCCCccccccc---Ch-hhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccC
Q 012474 336 GRGHIVKWAPQ---QEVLAHPAVGGFWTHN---GW-NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFE 408 (463)
Q Consensus 336 ~~~~~~~~vpq---~~lL~~~~~~~~I~hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t 408 (463)
+++.+.+++|+ .+++..+++ ||.-. |. .++.||+++|+|+|+ -..+ ....++.. ..|..++. -+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~d 365 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-LN 365 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-CS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-CC
Confidence 35578899986 457888898 77421 33 578999999999997 3222 12334442 46777775 78
Q ss_pred HHHHHHHHHHHhccc
Q 012474 409 RREIETAIRRVTVEA 423 (463)
Q Consensus 409 ~~~l~~~i~~~l~~~ 423 (463)
+++++++|.++++|+
T Consensus 366 ~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 366 PENIAETLVELCMSF 380 (413)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCH
Confidence 999999999999983
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.81 E-value=0.00037 Score=72.22 Aligned_cols=134 Identities=18% Similarity=0.240 Sum_probs=93.4
Q ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHh------cCCCceeeccChh
Q 012474 274 AAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEML------DGRGHIVKWAPQQ 347 (463)
Q Consensus 274 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~vpq~ 347 (463)
+++.+||.||....-.+++.+....+-|++.+.-++|....... .-+++.+.. .+++.+.+..|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~--------~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV--------GEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG--------GHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH--------HHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 35679999999888899999999999999998888888765421 112332222 2566777888864
Q ss_pred h---hhcCCCCccccc---ccChhhHHHHHhhCCceeccccccchhh--h-HHHHHHHhhceeecCCccCHHHHHHHHHH
Q 012474 348 E---VLAHPAVGGFWT---HNGWNSTLESICEGVPMICQPCFGDQLV--N-ARYVSHVWRVGLHLERKFERREIETAIRR 418 (463)
Q Consensus 348 ~---lL~~~~~~~~I~---hgG~~s~~eal~~GvP~l~~P~~~DQ~~--n-a~rv~~~~G~G~~l~~~~t~~~l~~~i~~ 418 (463)
+ .+..+|+ ++- .+|.+|++|||+.|||+|.+|- +++. . +..+.. +|+.-.+ .-+.++-.+.-.+
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g--~~~~sR~~~s~l~~-~gl~e~i--a~~~~~Y~~~a~~ 664 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPG--ETLASRVAASQLTC-LGCLELI--AKNRQEYEDIAVK 664 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCC--SSGGGTHHHHHHHH-HTCGGGB--CSSHHHHHHHHHH
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccC--CCccHhHHHHHHHH-cCCcccc--cCCHHHHHHHHHH
Confidence 4 4455666 764 8899999999999999999993 3332 2 344455 4665433 3466777666667
Q ss_pred Hhcc
Q 012474 419 VTVE 422 (463)
Q Consensus 419 ~l~~ 422 (463)
+-+|
T Consensus 665 la~d 668 (723)
T 4gyw_A 665 LGTD 668 (723)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 7777
No 51
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.70 E-value=0.00027 Score=60.58 Aligned_cols=78 Identities=13% Similarity=0.115 Sum_probs=60.1
Q ss_pred CCce-eeccCh---hhhhcCCCCccccccc---C-hhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccC
Q 012474 337 RGHI-VKWAPQ---QEVLAHPAVGGFWTHN---G-WNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFE 408 (463)
Q Consensus 337 ~~~~-~~~vpq---~~lL~~~~~~~~I~hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t 408 (463)
++.+ .+++++ ..++..+++ +|.-. | -.++.||+++|+|+|+... ......+ .. +.|..++. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-CC
Confidence 7888 899984 568889988 77432 3 4689999999999988754 3445555 53 77877764 68
Q ss_pred HHHHHHHHHHHhc-cc
Q 012474 409 RREIETAIRRVTV-EA 423 (463)
Q Consensus 409 ~~~l~~~i~~~l~-~~ 423 (463)
.+++.++|.++++ |+
T Consensus 167 ~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 167 PGELANAILKALELSR 182 (200)
T ss_dssp HHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHhcCH
Confidence 9999999999998 83
No 52
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.69 E-value=0.00013 Score=60.58 Aligned_cols=140 Identities=14% Similarity=0.148 Sum_probs=82.7
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHhcCCC--ceE-EEEcCCCCCCCccCCCCchhHH---HHhcCCCceeeccCh---h
Q 012474 277 SVMYVSFGSIVVVNVTEFLEIAWGLANSRV--PFL-WVVRPGLVPGVEWLEPLPKGFL---EMLDGRGHIVKWAPQ---Q 347 (463)
Q Consensus 277 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~v-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~vpq---~ 347 (463)
+++++..|... ....+..+++++..+.. ++- +.++.+. ..+.+. +...-++.+ +|+|+ .
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~---------~~~~~~~~~~~~~~~v~~-g~~~~~~~~ 69 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP---------DEKKIKLLAQKLGVKAEF-GFVNSNELL 69 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST---------THHHHHHHHHHHTCEEEC-CCCCHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc---------cHHHHHHHHHHcCCeEEE-eecCHHHHH
Confidence 46777788775 34456667777776532 332 3333321 112222 223336677 99986 4
Q ss_pred hhhcCCCCccccc----ccChhhHHHHHhhCC-ceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 348 EVLAHPAVGGFWT----HNGWNSTLESICEGV-PMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 348 ~lL~~~~~~~~I~----hgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
.++..+++ +|. -|.-.++.||+++|+ |+|+....+. ....+... +. .++ .-+.+++.++|.++++|
T Consensus 70 ~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~-~~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 70 EILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFE-PNNAKDLSAKIDWWLEN 140 (166)
T ss_dssp HHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EEC-TTCHHHHHHHHHHHHHC
T ss_pred HHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEc-CCCHHHHHHHHHHHHhC
Confidence 57888888 775 233469999999996 9999432211 11122221 33 223 36899999999999998
Q ss_pred ch-HHHHHHHHHHHHH
Q 012474 423 AE-GQEMRERIMHLKE 437 (463)
Q Consensus 423 ~~-~~~~~~~a~~~~~ 437 (463)
++ ...+.+++++..+
T Consensus 141 ~~~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 141 KLERERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 43 3445555555443
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.53 E-value=0.002 Score=60.45 Aligned_cols=103 Identities=10% Similarity=0.016 Sum_probs=65.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCc-eEEeCCCCCCCcccccccHHHHHHHHHH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPNPSNYPHF-SFNSISESLWESEVSTENAISLLTVLND 91 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (463)
|||+++...+.|++.-..++.++|+++ |.+|++++.+.........+.+ +++.++.. ... .. +
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~~~---~~----~----- 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--HGA---LE----I----- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC------------C----H-----
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--ccc---cc----h-----
Confidence 799999999999999999999999987 9999999996443333333444 34444311 000 00 0
Q ss_pred hcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEE
Q 012474 92 KCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIV 139 (463)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~ 139 (463)
..+..+.+.+.+ .++|++|.=....-+..++...|+|...
T Consensus 67 ---~~~~~l~~~l~~-----~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 ---GERRKLGHSLRE-----KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ---HHHHHHHHHTTT-----TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---HHHHHHHHHHHh-----cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 112234445544 6799999322334456677888999744
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.52 E-value=0.003 Score=59.32 Aligned_cols=107 Identities=9% Similarity=0.033 Sum_probs=74.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCce-EEeCCCCCCCcccccccHHHHHH
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPNPSNYPHFS-FNSISESLWESEVSTENAISLLT 87 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 87 (463)
.-..+||+++-..+.|++.-+.++.++|+++ +.+|++++.+.........+.++ ++.++... ....+.
T Consensus 5 ~l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~~---------~~~~~~ 75 (349)
T 3tov_A 5 ELDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKKG---------RHNSIS 75 (349)
T ss_dssp CCTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCSS---------HHHHHH
T ss_pred CCCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCccc---------ccccHH
Confidence 3457899999999999999999999999998 99999999976665555556664 55554210 000111
Q ss_pred HHHHhcCchHHHHHHHHHhCCCCCCCc-eEEEeCCchhhHHHHHHHcCCCeEE
Q 012474 88 VLNDKCVVPFQDCLAKLISNGDQEEPV-TCLITDAIWHFAQTVADTLRLPRIV 139 (463)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~p-D~VI~D~~~~~~~~~A~~~giP~v~ 139 (463)
.+..++..+.+ .++ |++|.=....-...++...|+|..+
T Consensus 76 --------~~~~l~~~Lr~-----~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 --------GLNEVAREINA-----KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --------HHHHHHHHHHH-----HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --------HHHHHHHHHhh-----CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 12234455554 569 9999655555566778888998655
No 55
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.41 E-value=0.0014 Score=65.18 Aligned_cols=140 Identities=11% Similarity=0.073 Sum_probs=89.9
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEE--cCCCCCCCccCCCCchhHH-HHhcCCCceeeccChhh---h
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVV--RPGLVPGVEWLEPLPKGFL-EMLDGRGHIVKWAPQQE---V 349 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~vpq~~---l 349 (463)
..++|.+|+...-..++.+....+.+++.+..++|.. +... +.. ..+-+.+. ..+.+++.+.+.+|+.+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~~--~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--GIT--HPYVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--GGG--HHHHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--hhh--HHHHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 3689999998877889999998888988887777643 3221 100 00111111 12346777788888654 4
Q ss_pred hcCCCCcccc---cccChhhHHHHHhhCCceeccccccchhhh-HHHHHHHhhceeecCCccCHHHHHHHHHHHhccc
Q 012474 350 LAHPAVGGFW---THNGWNSTLESICEGVPMICQPCFGDQLVN-ARYVSHVWRVGLHLERKFERREIETAIRRVTVEA 423 (463)
Q Consensus 350 L~~~~~~~~I---~hgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~ 423 (463)
+..+|+ ++ ..+|..|+.||+++|||+|.++--.=--.. +..+.. .|+.-.+- .-+.++..+...++.+|.
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LI-A~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLI-ANTVDEYVERAVRLAENH 589 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGE-ESSHHHHHHHHHHHHHCH
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCccee-cCCHHHHHHHHHHHhCCH
Confidence 577877 54 347889999999999999998843211112 222334 35543211 246888888888999983
No 56
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.30 E-value=0.00054 Score=63.99 Aligned_cols=109 Identities=16% Similarity=0.259 Sum_probs=79.5
Q ss_pred CCceeeccChhhh---hcCCCCcccccccCh---------hhHHHHHhhCCceeccccccchhhhHHHHHHHhhceeecC
Q 012474 337 RGHIVKWAPQQEV---LAHPAVGGFWTHNGW---------NSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLE 404 (463)
Q Consensus 337 ~~~~~~~vpq~~l---L~~~~~~~~I~hgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 404 (463)
|+.+.+|+|+.++ |..++.+++.+-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|...+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 6689999998664 555566556544433 34789999999999744 56788899996 9999887
Q ss_pred CccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHH
Q 012474 405 RKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVD 458 (463)
Q Consensus 405 ~~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 458 (463)
+.+++.++|..+.. ++.+.|++++++.+++++ .+.-..+++.+.+.
T Consensus 290 ---~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~ 335 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILR----KGFFTRRLLTESVF 335 (339)
T ss_dssp ---SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHH
Confidence 36788888888653 345789999999998887 45555555555443
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.66 E-value=0.069 Score=49.35 Aligned_cols=131 Identities=13% Similarity=0.024 Sum_probs=75.9
Q ss_pred CCeEEEEecCCccc---CCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeec--cCh-hh
Q 012474 275 AKSVMYVSFGSIVV---VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKW--APQ-QE 348 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--vpq-~~ 348 (463)
+++.|.+..|+... .+.+.+.++++.+.+.+.++++..++.. + .+..+.+.+.. +++.+.+- +.+ .+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~----e--~~~~~~i~~~~-~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH----E--EERAKRLAEGF-AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH----H--HHHHHHHHTTC-TTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH----H--HHHHHHHHhhC-CcccccCCCCHHHHHH
Confidence 45678888887543 7788888888888766777655433211 0 00111121111 12222222 234 77
Q ss_pred hhcCCCCcccccccChhhHHHHHhhCCceecc--ccccchhhhHHHHHHHhhce-eec-----CC-ccCHHHHHHHHHHH
Q 012474 349 VLAHPAVGGFWTHNGWNSTLESICEGVPMICQ--PCFGDQLVNARYVSHVWRVG-LHL-----ER-KFERREIETAIRRV 419 (463)
Q Consensus 349 lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~--P~~~DQ~~na~rv~~~~G~G-~~l-----~~-~~t~~~l~~~i~~~ 419 (463)
++.++++ +|+.= .|++.=|.+.|+|+|++ |.... +.-= +|-. ..+ .. .++++++.+++.++
T Consensus 250 li~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~------~~~P-~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~ 319 (326)
T 2gt1_A 250 VLAGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPG------LIGG-YGKNQMVCRAPGNELSQLTANAVKQFIEEN 319 (326)
T ss_dssp HHHTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHH------HHCC-CSSSEEEEECGGGCGGGCCHHHHHHHHHHT
T ss_pred HHHhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChh------hcCC-CCCCceEecCCcccccCCCHHHHHHHHHHH
Confidence 8999999 99982 34455577799999988 32111 1100 1111 111 11 68999999999999
Q ss_pred hcc
Q 012474 420 TVE 422 (463)
Q Consensus 420 l~~ 422 (463)
|++
T Consensus 320 l~~ 322 (326)
T 2gt1_A 320 AEK 322 (326)
T ss_dssp TTT
T ss_pred HHH
Confidence 976
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=93.17 E-value=0.75 Score=40.31 Aligned_cols=46 Identities=13% Similarity=0.017 Sum_probs=32.0
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNP 57 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 57 (463)
+++++|||++.-=-+. |---+..|+++|.+ +|+|+++.+..+....
T Consensus 7 ~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 7 TATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp ----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred ccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 4566799888766665 44557888888877 8999999998665443
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=88.32 E-value=7.4 Score=33.87 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=30.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNP 57 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 57 (463)
|||++.-=-+. |---+..|+++|.+.| +|+++.+..+....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTS
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCC
Confidence 78777665554 4455888999999988 99999998665443
No 60
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=88.22 E-value=8.2 Score=33.56 Aligned_cols=111 Identities=8% Similarity=0.114 Sum_probs=59.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCceEEeCCCCCC-CcccccccHHHHHHHH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN----YPHFSFNSISESLW-ESEVSTENAISLLTVL 89 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 89 (463)
|||++.-=-+. |---+..|+++|.+.| +|+++.|..+...... ...+++..++.+-. ....-...+..-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV--- 75 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCV--- 75 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHH---
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHH---
Confidence 56665544443 3344788999999888 8999999866544322 12244444432100 0011111121111
Q ss_pred HHhcCchHHHHHHHHHhCCCCCCCceEEEeCC----------ch---hhHHHHHHHcCCCeEEEeCc
Q 012474 90 NDKCVVPFQDCLAKLISNGDQEEPVTCLITDA----------IW---HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~----------~~---~~~~~~A~~~giP~v~~~~~ 143 (463)
.=.+..+.. .+||+||+.. ++ .+++.=|..+|||.|.++..
T Consensus 76 --------~lal~~l~~-----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 129 (247)
T 1j9j_A 76 --------KLAYNVVMD-----KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSA 129 (247)
T ss_dssp --------HHHHHTTST-----TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEES
T ss_pred --------HHHHHhhcc-----CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecC
Confidence 112222322 4699999632 22 44455566689999998763
No 61
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=87.56 E-value=6 Score=35.16 Aligned_cols=110 Identities=8% Similarity=0.029 Sum_probs=59.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCC----CCceEEeCCCCCCCcccccccHHHHHHHHH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNY----PHFSFNSISESLWESEVSTENAISLLTVLN 90 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (463)
|||++.-=-+. +---+..|+++|.+.| +|+++.|..+....... ..+++..++.+-.....-...+..
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaD------ 72 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSD------ 72 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHH------
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHH------
Confidence 56665544443 3344788999999988 99999998665443321 123343332210001111111211
Q ss_pred HhcCchHHHHHHHHHhCCCCCCCceEEEeCC-----------c---hhhHHHHHHHcCCCeEEEeCc
Q 012474 91 DKCVVPFQDCLAKLISNGDQEEPVTCLITDA-----------I---WHFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~-----------~---~~~~~~~A~~~giP~v~~~~~ 143 (463)
.+.=.+..+ . .+||+||+.. + +.+++.=|..+|||.|.++..
T Consensus 73 -----CV~lal~~l-~-----~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 73 -----TVYLATFGL-G-----RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp -----HHHHHHHHH-T-----SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred -----HHHHHHhcC-C-----CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 111123334 2 5799999631 1 244455556689999998774
No 62
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=86.38 E-value=13 Score=32.19 Aligned_cols=109 Identities=10% Similarity=0.020 Sum_probs=60.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCceEEeCCCCCC----CcccccccHHHHH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSN----YPHFSFNSISESLW----ESEVSTENAISLL 86 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~----~~g~~~~~~~~~~~----~~~~~~~~~~~~~ 86 (463)
|||++.-=-+. |---+..|+++|.+.| +|+++.+..+...... ...+++..++.+.+ ....-...+..-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 56665544443 3344788999999888 8999999866544322 12356665543210 1111112222111
Q ss_pred HHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeC----------Cc---hhhHHHHHHHcCCCeEEEeCc
Q 012474 87 TVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITD----------AI---WHFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D----------~~---~~~~~~~A~~~giP~v~~~~~ 143 (463)
.. .+. + . .+||+||+. .+ +.+++.=|..+|||.|.++..
T Consensus 79 ~l-----------al~-l-~-----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 130 (244)
T 2e6c_A 79 AL-----------GLH-L-F-----GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVP 130 (244)
T ss_dssp HH-----------HHH-H-S-----CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HH-----------HHc-C-C-----CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEecc
Confidence 11 111 2 2 579999963 22 244455566689999998764
No 63
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=83.32 E-value=2.8 Score=42.36 Aligned_cols=40 Identities=18% Similarity=0.196 Sum_probs=30.3
Q ss_pred eccCh---------hhhhcCCCCccccccc---Ch-hhHHHHHhhCCceeccccc
Q 012474 342 KWAPQ---------QEVLAHPAVGGFWTHN---GW-NSTLESICEGVPMICQPCF 383 (463)
Q Consensus 342 ~~vpq---------~~lL~~~~~~~~I~hg---G~-~s~~eal~~GvP~l~~P~~ 383 (463)
.|++. .++++.+++ ||.-. |+ .+..||+++|+|+|+.-..
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 77775 357888888 77542 33 6999999999999986654
No 64
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=82.72 E-value=24 Score=30.79 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNP 57 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 57 (463)
.|||++.-=-+. |---+..|+++|.+.| +|+++.|..+....
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~ 42 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGA 42 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCc
Confidence 367776655454 4445788999998876 99999998665443
No 65
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=82.16 E-value=4.8 Score=33.59 Aligned_cols=39 Identities=23% Similarity=0.411 Sum_probs=31.6
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 15 RRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 15 ~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
||++.+.. |+.|=..-...||..|+++|++|.++-.+..
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 56666654 4668899999999999999999999987643
No 66
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=81.83 E-value=5.8 Score=33.17 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=60.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC------CCCCCCCCceEEeCCCCCCCcccccccHHHHH
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNS------PNPSNYPHFSFNSISESLWESEVSTENAISLL 86 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (463)
++-.|.+++..+.|-....+.+|-+.+.+|++|.|+..-... ....+. +++++....++.. ...+...-.
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L-~v~~~~~g~gf~~---~~~~~~~~~ 102 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH-GVEFQVMATGFTW---ETQNREADT 102 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG-TCEEEECCTTCCC---CGGGHHHHH
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC-CcEEEEccccccc---CCCCcHHHH
Confidence 456788999999999999999999999999999999764321 011222 5788877764331 111111100
Q ss_pred HHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchh
Q 012474 87 TVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWH 124 (463)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~ 124 (463)
..+...+....+.+.+ .++|+||.|.+..
T Consensus 103 ----~~a~~~l~~a~~~l~~-----~~yDlvILDEi~~ 131 (196)
T 1g5t_A 103 ----AACMAVWQHGKRMLAD-----PLLDMVVLDELTY 131 (196)
T ss_dssp ----HHHHHHHHHHHHHTTC-----TTCSEEEEETHHH
T ss_pred ----HHHHHHHHHHHHHHhc-----CCCCEEEEeCCCc
Confidence 1111222223333322 5699999998754
No 67
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=80.02 E-value=14 Score=32.04 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=30.4
Q ss_pred CCCcEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLP--LQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.+.+|.++++.. ..|=..-...|++.|.++|.+|.++=+
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 345566666655 348999999999999999999999854
No 68
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=78.18 E-value=9.6 Score=33.27 Aligned_cols=27 Identities=19% Similarity=0.225 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 012474 29 NPMLQLASILYSKGFSITIIHTNFNSPN 56 (463)
Q Consensus 29 ~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 56 (463)
--+..|+++|.+.| +|+++.+..+...
T Consensus 15 pGi~~L~~~l~~~g-~V~VvAP~~~~Sg 41 (251)
T 2wqk_A 15 PGINALREALKSLG-RVVVVAPDRNLSG 41 (251)
T ss_dssp HHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred HHHHHHHHHHHhCC-CEEEEeeCCCCcc
Confidence 34778899999888 5999998765544
No 69
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=77.26 E-value=11 Score=36.59 Aligned_cols=109 Identities=14% Similarity=0.087 Sum_probs=69.8
Q ss_pred CCceeeccCh---hhhhcCCCCccccc---ccChh-hHHHHHhhC---CceeccccccchhhhHHHHHHHhhceeecCCc
Q 012474 337 RGHIVKWAPQ---QEVLAHPAVGGFWT---HNGWN-STLESICEG---VPMICQPCFGDQLVNARYVSHVWRVGLHLERK 406 (463)
Q Consensus 337 ~~~~~~~vpq---~~lL~~~~~~~~I~---hgG~~-s~~eal~~G---vP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 406 (463)
.+.+...+|+ ..++..+++ ++. +=|+| +..||+++| .|+|+--+.+ .+..+. .-|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 4566677776 456777887 663 45887 568999996 5655544332 222221 23677775
Q ss_pred cCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012474 407 FERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHIL 461 (463)
Q Consensus 407 ~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (463)
-+.++++++|.++|+++. +.-+++.+++.+.+. ......-++.+++.|.
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHh
Confidence 789999999999998642 233445555555553 3556677777777664
No 70
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=74.81 E-value=13 Score=36.03 Aligned_cols=103 Identities=14% Similarity=0.194 Sum_probs=66.0
Q ss_pred eeccChh---hhhcCCCCccccc---ccChh-hHHHHHhhCC-----ceecccccc--chhhhHHHHHHHhhceeecCCc
Q 012474 341 VKWAPQQ---EVLAHPAVGGFWT---HNGWN-STLESICEGV-----PMICQPCFG--DQLVNARYVSHVWRVGLHLERK 406 (463)
Q Consensus 341 ~~~vpq~---~lL~~~~~~~~I~---hgG~~-s~~eal~~Gv-----P~l~~P~~~--DQ~~na~rv~~~~G~G~~l~~~ 406 (463)
.+++++. .++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+ ++. . -|..++.
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l-------~---~g~lv~p- 403 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL-------T---SALIVNP- 403 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC-------T---TSEEECT-
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh-------C---CeEEECC-
Confidence 4777764 57778888 764 34664 8999999998 666554432 222 1 2455554
Q ss_pred cCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012474 407 FERREIETAIRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHILS 462 (463)
Q Consensus 407 ~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (463)
-+.++++++|.++|++++ +.-++..++.++.++ . .+....++++++.+++
T Consensus 404 ~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 404 YDRDEVAAALDRALTMSL-AERISRHAEMLDVIV----K-NDINHWQECFISDLKQ 453 (482)
T ss_dssp TCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHh
Confidence 788999999999998531 122333344444443 3 4678888888887764
No 71
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=74.05 E-value=4.3 Score=31.74 Aligned_cols=39 Identities=15% Similarity=0.145 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
++.||++.+.++-.|-....-++..|..+|++|..+...
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 457899999999999999999999999999999988763
No 72
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=73.41 E-value=2.9 Score=37.49 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||++. |+.|-+- ..|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 887765 3445443 4688999999999999875
No 73
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=72.46 E-value=19 Score=34.05 Aligned_cols=96 Identities=15% Similarity=0.198 Sum_probs=50.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCc-eEEeCCCCCCCcccccccHHHHHHHHH
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHF-SFNSISESLWESEVSTENAISLLTVLN 90 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (463)
++..||+++..+.. + ..+.+++++.|++|+++.+....... ..... .++.++.. .+...+.
T Consensus 3 ~~~k~l~Il~~~~~-~----~~i~~aa~~lG~~vv~v~~~~~~~~~-~~~~~d~~~~~~~~--------~d~~~~~---- 64 (425)
T 3vot_A 3 KRNKNLAIICQNKH-L----PFIFEEAERLGLKVTFFYNSAEDFPG-NLPAVERCVPLPLF--------EDEEAAM---- 64 (425)
T ss_dssp CCCCEEEEECCCTT-C----CHHHHHHHHTTCEEEEEEETTSCCCC-SCTTEEEEEEECTT--------TCHHHHH----
T ss_pred CCCcEEEEECCChh-H----HHHHHHHHHCCCEEEEEECCCccccc-CHhhccEEEecCCC--------CCHHHHH----
Confidence 45567777765432 2 13567888889999998775432111 11111 23333311 1111111
Q ss_pred HhcCchHHHHHHHHHhCCCCCCCceEEEe--CCchhhHHHHHHHcCCCe
Q 012474 91 DKCVVPFQDCLAKLISNGDQEEPVTCLIT--DAIWHFAQTVADTLRLPR 137 (463)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~pD~VI~--D~~~~~~~~~A~~~giP~ 137 (463)
+.+.++... .++|.|+. |.....+..+++.+|+|.
T Consensus 65 --------~~~~~~~~~----~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 --------DVVRQTFVE----FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp --------HHHHHHHHH----SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred --------HHHHHhhhh----cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 222333322 56899885 333355667889999994
No 74
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=71.80 E-value=3.5 Score=33.35 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=36.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.++.||++.+.++-.|-....-++..|..+|++|.++...
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4678999999999999999999999999999999988763
No 75
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=71.62 E-value=5.7 Score=33.62 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=32.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+++||++--.|+.|-+. ...|.++|.++|++|.++.++
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 35688888888877666 889999999999999999985
No 76
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=70.88 E-value=3.5 Score=32.80 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|++.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 45678888843 4443 78899999999999999874
No 77
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=70.87 E-value=5.2 Score=33.47 Aligned_cols=36 Identities=11% Similarity=0.049 Sum_probs=31.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSK-GFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 51 (463)
|||++--.|+.|-+. ...+.++|.++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 688888888876655 89999999999 9999999885
No 78
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=68.40 E-value=20 Score=29.33 Aligned_cols=76 Identities=11% Similarity=0.104 Sum_probs=40.9
Q ss_pred eeeccCh-hhhhc-CCCCcccccccChhhHHH---HHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHH
Q 012474 340 IVKWAPQ-QEVLA-HPAVGGFWTHNGWNSTLE---SICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIET 414 (463)
Q Consensus 340 ~~~~vpq-~~lL~-~~~~~~~I~hgG~~s~~e---al~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~ 414 (463)
++++.+. ..++. .++. .++--||.||.-| ++.+++|++.+|.+. .....+... -..... ..-+++++.+
T Consensus 93 ~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~-~~~~~~e~~~ 166 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVH-VAADVAGAIA 166 (176)
T ss_dssp ECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEE-EESSHHHHHH
T ss_pred EcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEE-EcCCHHHHHH
Confidence 3455554 33333 4443 3555688887655 477999999999832 111111111 111111 1356777777
Q ss_pred HHHHHhc
Q 012474 415 AIRRVTV 421 (463)
Q Consensus 415 ~i~~~l~ 421 (463)
.+.+.+.
T Consensus 167 ~l~~~~~ 173 (176)
T 2iz6_A 167 AVKQLLA 173 (176)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766554
No 79
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=67.43 E-value=23 Score=30.45 Aligned_cols=23 Identities=22% Similarity=0.293 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 012474 30 PMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 30 p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.-.++|++|.++|++|++++.+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 45678999999999999999854
No 80
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=67.33 E-value=4.3 Score=37.62 Aligned_cols=40 Identities=23% Similarity=0.270 Sum_probs=31.8
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 14 GRRVILFPL-PLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 14 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
.++|+|+.. |+.|-..-...||..|+++|++|.++..+..
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 344444443 4669999999999999999999999998753
No 81
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=67.14 E-value=14 Score=33.22 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=32.6
Q ss_pred CCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.+.+|+++++. |+-|=..-...||..|+++|.+|.++-.+.
T Consensus 101 ~~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 101 ETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34556665554 567899999999999999999999998764
No 82
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=66.73 E-value=8.6 Score=32.30 Aligned_cols=41 Identities=17% Similarity=0.007 Sum_probs=33.3
Q ss_pred CCcEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCCCC
Q 012474 13 KGRRVILFPLPLQGHIN-PMLQLASILYSKGFSITIIHTNFNS 54 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~ 54 (463)
+++||++--.|+ +..+ =...+.++|.++|++|.++.++...
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 457888887777 5555 7899999999999999999986443
No 83
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=66.12 E-value=6.4 Score=34.43 Aligned_cols=48 Identities=19% Similarity=0.050 Sum_probs=34.3
Q ss_pred hhhhccCCCCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 5 KESNVQQKKGRRVILFPLP---LQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 5 ~~~~~~~~~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.++....+..||.+|++.| +.|-=.....|+..|.+||++||.+--++
T Consensus 13 ~gt~~~~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 13 LGTENLYFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp --------CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred ccccccccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccc
Confidence 4555666889999999998 34666778899999999999999987654
No 84
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=64.65 E-value=6.1 Score=30.42 Aligned_cols=34 Identities=29% Similarity=0.522 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.|||+++-. |.+- ..+++.|.++||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3589998843 5543 46789999999999998763
No 85
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=64.30 E-value=10 Score=29.70 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=29.3
Q ss_pred CCCCcEEEEEcC-CC-ccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 11 QKKGRRVILFPL-PL-QGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 11 ~~~~~~il~~~~-~~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.++.||++++-. |- .-.+--.+-++..|.++||+|++.+++.
T Consensus 3 ~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA 46 (157)
T 1kjn_A 3 TESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPA 46 (157)
T ss_dssp ---CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred cccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHH
Confidence 355788666533 32 2455568889999999999999999864
No 86
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=63.88 E-value=7.9 Score=31.69 Aligned_cols=38 Identities=18% Similarity=0.100 Sum_probs=31.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
+||++.-.|+.|=+. ...+.+.|.++|++|.++.++..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A 43 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNG 43 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCH
Confidence 688888888765554 88999999999999999998643
No 87
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=63.68 E-value=14 Score=33.01 Aligned_cols=41 Identities=15% Similarity=0.236 Sum_probs=32.0
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 13 KGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 13 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
++.|+++++. |+-|-..-...||..|+++|.+|.++-.+..
T Consensus 90 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 90 AQNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TTCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 3445555544 4668999999999999999999999987643
No 88
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=63.66 E-value=14 Score=31.16 Aligned_cols=45 Identities=11% Similarity=-0.058 Sum_probs=32.9
Q ss_pred hccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEE
Q 012474 266 CISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLW 310 (463)
Q Consensus 266 l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~ 310 (463)
+.+|+.+...+.++||..+|......+.+....++++.++..+.+
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 455664444577999988876544556788899999999987554
No 89
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=62.22 E-value=14 Score=31.67 Aligned_cols=41 Identities=22% Similarity=0.180 Sum_probs=36.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
..+++|++..-|+.|-..-++.+|.+|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34788999999999999999999999999999999888754
No 90
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=62.17 E-value=12 Score=35.68 Aligned_cols=42 Identities=12% Similarity=0.298 Sum_probs=35.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNS 54 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 54 (463)
++..|+++..++.|-..-+..||..|.++|++|.++..+...
T Consensus 99 ~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 99 KPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp SSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred CCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 355677777778899999999999999999999999987554
No 91
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=61.74 E-value=61 Score=26.05 Aligned_cols=140 Identities=14% Similarity=0.140 Sum_probs=80.5
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCC
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPA 354 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~ 354 (463)
.+|.|-|-+||.. +....+++...|+.++.++-+.+.... ..|+.+.+ |+.+.+ -...+
T Consensus 10 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~----------~~~~a~-~~g~~ 68 (170)
T 1xmp_A 10 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--------RTPDYMFE----------YAETAR-ERGLK 68 (170)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHH----------HHHHTT-TTTCC
T ss_pred CCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--------CCHHHHHH----------HHHHHH-hCCCc
Confidence 4677888899877 666788888899998887655444322 25555422 111100 01234
Q ss_pred CcccccccChh----hHHHHHhhCCceeccccccc--hhhhH-HHHHH--Hhhcee---ecC--CccCHHHHHHHHHHHh
Q 012474 355 VGGFWTHNGWN----STLESICEGVPMICQPCFGD--QLVNA-RYVSH--VWRVGL---HLE--RKFERREIETAIRRVT 420 (463)
Q Consensus 355 ~~~~I~hgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na-~rv~~--~~G~G~---~l~--~~~t~~~l~~~i~~~l 420 (463)
+ +|.=.|.. ++.-++ .-+|+|.+|.... ....+ .-..+ . |+.+ .++ ...+..-++..|- -+
T Consensus 69 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~ 143 (170)
T 1xmp_A 69 V--IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GS 143 (170)
T ss_dssp E--EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HT
T ss_pred E--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-cc
Confidence 5 88766643 444444 4689999998642 11121 22233 3 5543 223 1355566665555 34
Q ss_pred ccchHHHHHHHHHHHHHHHHHHH
Q 012474 421 VEAEGQEMRERIMHLKEKLELSL 443 (463)
Q Consensus 421 ~~~~~~~~~~~a~~~~~~~~~~~ 443 (463)
.| +.++++.+.++++.++..
T Consensus 144 ~d---~~l~~kl~~~r~~~~~~v 163 (170)
T 1xmp_A 144 FH---DDIHDALELRREAIEKDV 163 (170)
T ss_dssp TC---HHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHH
Confidence 55 688999988888887543
No 92
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=61.07 E-value=9.9 Score=32.10 Aligned_cols=40 Identities=18% Similarity=0.110 Sum_probs=36.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 86 ~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 86 PSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 3466899999999999999999999999999999998864
No 93
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=60.35 E-value=10 Score=32.10 Aligned_cols=40 Identities=15% Similarity=0.114 Sum_probs=32.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
.+++||++.-.|+.+-+. ...|.++|.++| +|.++.++..
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A 56 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSS 56 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGG
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchH
Confidence 456789999999887666 899999999999 9999998643
No 94
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=60.28 E-value=13 Score=32.55 Aligned_cols=40 Identities=13% Similarity=0.109 Sum_probs=36.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4578999999999999999999999999999999998874
No 95
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=59.70 E-value=11 Score=29.96 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
...++|+++-.|..| ..+++.|.++|++|+++....
T Consensus 17 ~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 457899999554333 568899999999999997743
No 96
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=59.52 E-value=14 Score=28.63 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=28.2
Q ss_pred CcEEEEEcCCC---ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPL---QGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~---~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+|++++-..+ .......+.+|...++.||+|+++-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 45555554444 456778888999999999999988774
No 97
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=59.45 E-value=22 Score=32.84 Aligned_cols=26 Identities=23% Similarity=0.494 Sum_probs=20.8
Q ss_pred CCCCcccccccChhhH---HHHHhhCCceec
Q 012474 352 HPAVGGFWTHNGWNST---LESICEGVPMIC 379 (463)
Q Consensus 352 ~~~~~~~I~hgG~~s~---~eal~~GvP~l~ 379 (463)
+|++ +|++||+-++ .-|...|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 6778 9999998765 456778999985
No 98
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=58.81 E-value=8.7 Score=32.41 Aligned_cols=40 Identities=13% Similarity=0.044 Sum_probs=31.1
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCCC
Q 012474 13 KGRRVILFPLPLQGHINP-MLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
+++||++--.|+ +..+- ...+.+.|.++|++|.++.++..
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 456888877776 45654 78999999999999999998543
No 99
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=58.80 E-value=13 Score=25.38 Aligned_cols=49 Identities=12% Similarity=0.104 Sum_probs=35.1
Q ss_pred hhCCceeccccccchhhhHH-HHHHHhhceeecCC--ccCHHHHHHHHHHHhc
Q 012474 372 CEGVPMICQPCFGDQLVNAR-YVSHVWRVGLHLER--KFERREIETAIRRVTV 421 (463)
Q Consensus 372 ~~GvP~l~~P~~~DQ~~na~-rv~~~~G~G~~l~~--~~t~~~l~~~i~~~l~ 421 (463)
-.|+|++++--...|.+.-. .-+.+ .-|+..+. +.+++++...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneak-kegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAK-KEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHH-HHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHH-hcCcchhhhccCCHHHHHHHHHHHHH
Confidence 46899988887777777433 33442 56666655 7889999999988874
No 100
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=57.35 E-value=44 Score=28.55 Aligned_cols=106 Identities=5% Similarity=-0.037 Sum_probs=59.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEeCCCCCCCcccccccHHHHH
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPN---PSNYPHFSFNSISESLWESEVSTENAISLL 86 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (463)
.+.|||+|+..++. + -+..+.+.|.+. +++|..+.++..... .....|+.+..++..-.. + .
T Consensus 20 ~~~~rI~~l~SG~g-~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~------~-r--- 86 (229)
T 3auf_A 20 GHMIRIGVLISGSG-T--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYP------S-R--- 86 (229)
T ss_dssp TTCEEEEEEESSCC-H--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSS------S-H---
T ss_pred CCCcEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccccc------c-h---
Confidence 44579999987773 3 367788888876 688877665422111 112246666654421000 0 0
Q ss_pred HHHHHhcCchHHH-HHHHHHhCCCCCCCceEEEeCCch-hhHHHHHHHcCCCeEEEeCc
Q 012474 87 TVLNDKCVVPFQD-CLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 87 ~~~~~~~~~~l~~-~l~~l~~~~~~~~~pD~VI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (463)
..+.+ .++.+.+ .+||+||+-.+. .-...+-+.+...++-+.++
T Consensus 87 --------~~~~~~~~~~l~~-----~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 --------TAFDAALAERLQA-----YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --------HHHHHHHHHHHHH-----TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --------hhccHHHHHHHHh-----cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 11111 3333443 679999987653 44455556666667776666
No 101
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=56.63 E-value=13 Score=32.95 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.|||++.- + |- --..|+++|.++||+|+.++-.
T Consensus 2 ~~~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 457888773 4 63 4567899999999999999874
No 102
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=55.19 E-value=47 Score=31.88 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=52.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccccccHHHHHHHHHHh
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDK 92 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (463)
.+.|++++.-+ .-.+.+++-|.+-|.+|..+.+........+.. .......|..
T Consensus 312 ~Gkrv~i~~~~-----~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~------------~~~v~~~D~~--------- 365 (458)
T 3pdi_B 312 SSARTAIAADP-----DLLLGFDALLRSMGAHTVAAVVPARAAALVDSP------------LPSVRVGDLE--------- 365 (458)
T ss_dssp TTCEEEEECCH-----HHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT------------SSCEEESHHH---------
T ss_pred CCCEEEEECCc-----HHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc------------cCcEEeCCHH---------
Confidence 36788886432 455788888988999999988754322111100 0000001111
Q ss_pred cCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEE
Q 012474 93 CVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVL 140 (463)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~ 140 (463)
.++++.+. .+||++|.+.. ...+|+++|||++.+
T Consensus 366 -------~le~~i~~----~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 -------DLEHAARA----GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp -------HHHHHHHH----HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred -------HHHHHHHh----cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 12222221 56999999865 567899999999874
No 103
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=54.72 E-value=9.1 Score=32.99 Aligned_cols=38 Identities=13% Similarity=-0.024 Sum_probs=33.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
|||+|..-|+.|=..-...||..|+++|++|.++-.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 78999777777889999999999999999999998765
No 104
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=54.67 E-value=15 Score=31.18 Aligned_cols=41 Identities=17% Similarity=0.129 Sum_probs=35.8
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
..++.||++.+.++-.|-....-++..|..+|++|..+...
T Consensus 89 ~~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 89 GEEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp ---CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 34578999999999999999999999999999999998874
No 105
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=54.31 E-value=37 Score=26.24 Aligned_cols=63 Identities=17% Similarity=0.178 Sum_probs=40.1
Q ss_pred hCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 012474 373 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAEGQEMRERIMHLKEKLE 440 (463)
Q Consensus 373 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~~~~~~~~a~~~~~~~~ 440 (463)
..+|+|++--..+ ........+ .|+--.+.+.++.++|...|+.++.. ..++...+++++.+.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 4688887754444 334445555 37755565579999999999999976 444444444444443
No 106
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=52.31 E-value=24 Score=29.17 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=30.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+||++.-.|+.|-+ =...+.++|.++|++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECh
Confidence 47888888887754 5789999999999999999885
No 107
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=51.60 E-value=20 Score=27.42 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=26.1
Q ss_pred cEEEEEcCC-Ccc--CHHHHHHHHHHHHhCCCeE-EEEeCC
Q 012474 15 RRVILFPLP-LQG--HINPMLQLASILYSKGFSI-TIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~-~~G--H~~p~l~La~~L~~rGh~V-t~~~~~ 51 (463)
||++++-.. .+| .....+.+|..+.+.||+| .++-..
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 455544443 344 4567899999999999999 877664
No 108
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=51.51 E-value=65 Score=27.80 Aligned_cols=94 Identities=10% Similarity=0.017 Sum_probs=51.7
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccccccHHHHHHHHHHhc
Q 012474 15 RRVILFPLPLQGHI-NPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDKC 93 (463)
Q Consensus 15 ~~il~~~~~~~GH~-~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (463)
|||+++-.-+.-++ ..+...++.+..-|.+|.+.+.++.....+ ...+. ...
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~~gp~~i~-------------------~~~d~--------~~a 54 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPRAGVPSIE-------------------GHFDE--------AIA 54 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCSSSCSSCC-------------------SHHHH--------HHH
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCchhhc-------------------ChhHH--------HHH
Confidence 77877766655444 567778888777788888888642111000 00000 111
Q ss_pred CchHHHHHHHHHhCCCCCCCceEEEeCCchhhHH-HHHHHcCCCeEEE
Q 012474 94 VVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQ-TVADTLRLPRIVL 140 (463)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~-~~A~~~giP~v~~ 140 (463)
...+.+.+..+.+ .++|+||..-++..+. .+.+.+++|++.+
T Consensus 55 ~~~l~~~~~~l~~-----~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 55 AVGVLEQIRAGRE-----QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHHHHHHHHHHH-----HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHHHHHHHHHHHH-----CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 1222333344443 4689999776663333 4555679998864
No 109
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=50.98 E-value=13 Score=31.32 Aligned_cols=42 Identities=14% Similarity=0.168 Sum_probs=31.9
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYS-KGFSITIIHTNFN 53 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~ 53 (463)
..++.||++.-.|+.+=+ -...+.++|.+ +|++|.++.++..
T Consensus 16 ~l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A 58 (206)
T 1qzu_A 16 MERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERA 58 (206)
T ss_dssp CCSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGG
T ss_pred ccCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhH
Confidence 345678888888887644 45899999999 8999999998643
No 110
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=50.72 E-value=50 Score=26.91 Aligned_cols=34 Identities=15% Similarity=0.361 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|+|+++ |+.|-+ -..++++|.++||+|+.++-.
T Consensus 3 ~~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 3 VKKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 3677765 333433 467899999999999998864
No 111
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=50.32 E-value=16 Score=33.29 Aligned_cols=34 Identities=18% Similarity=0.147 Sum_probs=28.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..+||.|+-.++.| +-.+|+.|.++||+|+..=.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 35789999999877 66799999999999998754
No 112
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=50.07 E-value=55 Score=27.11 Aligned_cols=30 Identities=7% Similarity=0.059 Sum_probs=24.5
Q ss_pred CCCCcccccccChhhHHHHHhhCCceecccccc
Q 012474 352 HPAVGGFWTHNGWNSTLESICEGVPMICQPCFG 384 (463)
Q Consensus 352 ~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~ 384 (463)
.+++ +|+.||........ .++|+|-+|..+
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4556 99999998888875 579999999753
No 113
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=49.73 E-value=18 Score=32.56 Aligned_cols=32 Identities=9% Similarity=0.038 Sum_probs=24.4
Q ss_pred hhcCCCCcccccccChhhHHHHHhh----CCceecccc
Q 012474 349 VLAHPAVGGFWTHNGWNSTLESICE----GVPMICQPC 382 (463)
Q Consensus 349 lL~~~~~~~~I~hgG~~s~~eal~~----GvP~l~~P~ 382 (463)
....+++ +|.-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445677 9999999999999754 899999883
No 114
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=49.36 E-value=12 Score=34.75 Aligned_cols=43 Identities=12% Similarity=0.095 Sum_probs=26.8
Q ss_pred chhhhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 4 QKESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 4 ~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+..+....++.|||.|+-.|..| ..+|+.|.++||+|+++...
T Consensus 12 ~~~~~~~Mm~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 12 DLGTENLYFQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp ----------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcccchhhhcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 34444555678999999766544 57889999999999988653
No 115
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=48.89 E-value=49 Score=27.96 Aligned_cols=101 Identities=14% Similarity=0.051 Sum_probs=57.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCceEEeCCCC-CCCcccccccHHHH
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPN---PSNYPHFSFNSISES-LWESEVSTENAISL 85 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~---~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~ 85 (463)
.+++||+++..+. ||. +.+|.+++.+. +++|..+.++..... .....|+.+..++.. +. +
T Consensus 6 ~~~~ri~vl~SG~-gsn--l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~~~-------~---- 71 (215)
T 3kcq_A 6 KKELRVGVLISGR-GSN--LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPLD-------I---- 71 (215)
T ss_dssp -CCEEEEEEESSC-CHH--HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTBC-------H----
T ss_pred CCCCEEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccCC-------h----
Confidence 3467899888876 443 45666666554 378887766422111 111246666655421 10 0
Q ss_pred HHHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCch-hhHHHHHHHcCCCeEEEeCc
Q 012474 86 LTVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 86 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (463)
.+.++.+.+ .+||+||+-.+. .-...+-+...-.++-+.++
T Consensus 72 ------------~~~~~~L~~-----~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 ------------EHISTVLRE-----HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ------------HHHHHHHHH-----TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------------HHHHHHHHH-----hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 234444444 679999987754 44455556666667776666
No 116
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=48.67 E-value=10 Score=33.27 Aligned_cols=53 Identities=15% Similarity=0.195 Sum_probs=37.0
Q ss_pred CCCCcccccccChhhHHHHHhh---CCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 352 HPAVGGFWTHNGWNSTLESICE---GVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 352 ~~~~~~~I~hgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
.+++ +|+=||=||+.+++.. ++|++.++. + . +|.-. .+.++++.+++..+++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G----------~-~Gfl~----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-G----------R-LGFLT----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-S----------S-CCSSC----CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-C----------C-CCccC----cCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999876 889988873 2 1 12222 24566677777776654
No 117
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=48.48 E-value=20 Score=32.50 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=28.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.+.|||+|+-.|..| ..+|+.|+++||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 456899999887766 6788999999999998755
No 118
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=48.42 E-value=11 Score=34.17 Aligned_cols=23 Identities=9% Similarity=0.127 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 012474 30 PMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 30 p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.-..+|+++.++|++|+|++.+.
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCEEEEEecCC
Confidence 56789999999999999999854
No 119
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=47.93 E-value=30 Score=30.72 Aligned_cols=44 Identities=14% Similarity=0.093 Sum_probs=24.9
Q ss_pred hhccCCCCcEEEEEc-CCCccCHHH--HHHHHHHHHhCCCeEEEEeC
Q 012474 7 SNVQQKKGRRVILFP-LPLQGHINP--MLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 7 ~~~~~~~~~~il~~~-~~~~GH~~p--~l~La~~L~~rGh~Vt~~~~ 50 (463)
.....++.|||+++- .|-...++- .-.+.+.|.++||+|+++-=
T Consensus 15 t~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 15 TENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp -------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 344557899987763 343333333 34567788889999999743
No 120
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=47.73 E-value=14 Score=30.77 Aligned_cols=38 Identities=11% Similarity=0.037 Sum_probs=31.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
++.||++.-.|+.|=+. ...+.+.|.++|++|.++.++
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEch
Confidence 34688888888866554 789999999999999999885
No 121
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=47.68 E-value=22 Score=28.40 Aligned_cols=39 Identities=15% Similarity=0.237 Sum_probs=32.1
Q ss_pred CCcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+.+|+++|.-+. --..+...|++.|.++|.+|.|..++
T Consensus 22 ~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 22 NASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp TCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 4677888886644 25668999999999999999999985
No 122
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=47.66 E-value=14 Score=28.60 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.++|+++-. |. --..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CH--HHHHHHHHHHHCCCeEEEEECC
Confidence 457888755 43 2467999999999999998764
No 123
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=47.36 E-value=1.1e+02 Score=24.68 Aligned_cols=138 Identities=15% Similarity=0.127 Sum_probs=77.3
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCC
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPA 354 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~ 354 (463)
.++.|-|-+||.. +....+++...|+.++.++=+.+...+ ..|+.+.+ |+-.. --...+
T Consensus 6 ~~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaH--------R~p~~~~~----------~~~~a-~~~g~~ 64 (174)
T 3lp6_A 6 ERPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAH--------RTPEAMFS----------YARGA-AARGLE 64 (174)
T ss_dssp CCCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHH----------HHHHH-HHHTCC
T ss_pred CCCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCC--------CCHHHHHH----------HHHHH-HhCCCC
Confidence 3456777788876 566778888889988887655444332 15555422 11110 012345
Q ss_pred CcccccccChh----hHHHHHhhCCceeccccccchh-hhHH--HHHHHh--hc--eeec-CCccCHHHHHHHHHHHhcc
Q 012474 355 VGGFWTHNGWN----STLESICEGVPMICQPCFGDQL-VNAR--YVSHVW--RV--GLHL-ERKFERREIETAIRRVTVE 422 (463)
Q Consensus 355 ~~~~I~hgG~~----s~~eal~~GvP~l~~P~~~DQ~-~na~--rv~~~~--G~--G~~l-~~~~t~~~l~~~i~~~l~~ 422 (463)
+ +|.=.|.. ++.-++ .-+|+|.+|...-.. .... -..+ + |+ +.+. +...+...++..|-.+ .|
T Consensus 65 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vq-mp~GvpVatV~I~~~~nAa~lAa~Il~~-~d 139 (174)
T 3lp6_A 65 V--IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQ-MPAGVPVATVSIGGAGNAGLLAVRMLGA-AN 139 (174)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHC-CCTTCCCEECCTTCHHHHHHHHHHHHHT-TC
T ss_pred E--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCeeEEEEcCcchHHHHHHHHHHhC-CC
Confidence 5 88776643 444443 568999999863211 1121 2222 2 43 2222 2245555555555444 44
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 012474 423 AEGQEMRERIMHLKEKLEL 441 (463)
Q Consensus 423 ~~~~~~~~~a~~~~~~~~~ 441 (463)
+.++++.+.++++.++
T Consensus 140 ---~~l~~kl~~~r~~~~~ 155 (174)
T 3lp6_A 140 ---PQLRARIVAFQDRLAD 155 (174)
T ss_dssp ---HHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHH
Confidence 5788888888877764
No 124
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=47.24 E-value=1.3e+02 Score=25.42 Aligned_cols=40 Identities=13% Similarity=0.213 Sum_probs=31.8
Q ss_pred CCCcEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLP-LQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.++. +.+++.+ +.|=..-++.++..+..+|..|.++.+..
T Consensus 10 ~~G~-i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 10 KIGW-IEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp -CCE-EEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCcE-EEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 4444 5555555 88999999999999999999999997654
No 125
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=47.24 E-value=7 Score=40.30 Aligned_cols=108 Identities=10% Similarity=0.027 Sum_probs=73.5
Q ss_pred eccChhhhhcCCCCcccccccChhhHHHHHhhCCceeccccccchhhhHHHHHHHhhceee----cCC--ccCHHHHHHH
Q 012474 342 KWAPQQEVLAHPAVGGFWTHNGWNSTLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLH----LER--KFERREIETA 415 (463)
Q Consensus 342 ~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~----l~~--~~t~~~l~~~ 415 (463)
++.+-.++|..+++ +||-- .+.+.|.+..++|+|....-.|+...- .. |+=.. ++. -.|.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHHHH
Confidence 44455789999999 99984 478999999999999988766665431 11 32211 122 4678999999
Q ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012474 416 IRRVTVEAEGQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDHI 460 (463)
Q Consensus 416 i~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 460 (463)
|.....+. ..++++.+++.+.+-. .+.|.++++.++.+++..
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcC
Confidence 98877532 4677777777777642 235666677777766654
No 126
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=47.15 E-value=13 Score=34.20 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|+.|||+++-.|..| ..+|..|.++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 345899999776555 4578889999999998865
No 127
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=46.90 E-value=80 Score=24.13 Aligned_cols=54 Identities=9% Similarity=0.128 Sum_probs=37.8
Q ss_pred hHHHHHh-----hCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhc
Q 012474 366 STLESIC-----EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTV 421 (463)
Q Consensus 366 s~~eal~-----~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~ 421 (463)
.+++.+. ..+|+|++--..+.. ...+..+ .|+--.+.+.++.++|.+.|++++.
T Consensus 74 el~~~ir~~~~~~~ipvI~lTa~~~~~-~~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 74 DLLKNIRADEELKHLPVLMITAEAKRE-QIIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHHHHHSTTTTTCCEEEEESSCCHH-HHHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCCeEEEEECCCCHH-HHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 4455554 468888877555444 4455556 3887667668999999999999875
No 128
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=46.80 E-value=23 Score=28.43 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=31.8
Q ss_pred CCcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+.+|+++|.-+. --..+...|++.|.++|.+|.|..++
T Consensus 21 ~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 21 EANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp HCSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 3567888887644 24668999999999999999999985
No 129
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=46.78 E-value=20 Score=30.64 Aligned_cols=38 Identities=5% Similarity=-0.004 Sum_probs=30.8
Q ss_pred CCcEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLP--LQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.+||.++++.. +.|-..-...|++.|.++|++|.++=+
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 35776666665 448999999999999999999999753
No 130
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=46.24 E-value=32 Score=30.86 Aligned_cols=81 Identities=12% Similarity=-0.025 Sum_probs=48.8
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCc
Q 012474 277 SVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVG 356 (463)
Q Consensus 277 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 356 (463)
-.|+++--|......+.+..+...|+..+..+.+...... ....+ +. .++....++
T Consensus 11 ~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~-----------~~a~~-------~~-----~~~~~~~d~- 66 (304)
T 3s40_A 11 VLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ-----------GDATK-------YC-----QEFASKVDL- 66 (304)
T ss_dssp EEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST-----------THHHH-------HH-----HHHTTTCSE-
T ss_pred EEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc-----------chHHH-------HH-----HHhhcCCCE-
Confidence 3456665444332345567777888877777655543321 11110 00 111224456
Q ss_pred ccccccChhhHHHHHh------hCCceecccc
Q 012474 357 GFWTHNGWNSTLESIC------EGVPMICQPC 382 (463)
Q Consensus 357 ~~I~hgG~~s~~eal~------~GvP~l~~P~ 382 (463)
+|.-||-||+.|++. .++|+.++|.
T Consensus 67 -vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 67 -IIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp -EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred -EEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 999999999999864 5799999996
No 131
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=46.07 E-value=12 Score=34.17 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.|||+++-.|+.| ..+|..|.++||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 45899999777665 46788999999999999863
No 132
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=45.51 E-value=14 Score=33.16 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4899999776555 4678899999999999865
No 133
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=45.50 E-value=14 Score=33.65 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=27.5
Q ss_pred chhhhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 4 QKESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 4 ~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+|+--+-.--.|||.|+-.|..| ..+|..|.+.||+|+++..
T Consensus 4 ~~~~~~~~~~~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 4 DKIHHHHHHMEMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp ----------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccccccccccCCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 44444445558999999887766 5788999999999999865
No 134
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=45.23 E-value=19 Score=33.46 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQG-H---INPMLQLASIL-YSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~G-H---~~p~l~La~~L-~~rGh~Vt~~~~~ 51 (463)
++|||+++..|..+ | +.....++++| .++||+|+.+...
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 47899999876555 3 33578899999 9999999998753
No 135
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=44.90 E-value=25 Score=28.22 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=32.4
Q ss_pred CCcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 13 KGRRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 13 ~~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.+.+|+++|.-+. -=..+...|++.|.++|.+|.|..++-
T Consensus 29 ~A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 29 NSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp HCSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3668888887644 245689999999999999999999853
No 136
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=44.79 E-value=35 Score=30.92 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
+++|||+|+..+. ......++|.++||+|..+.+.+
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCC
Confidence 5689999997764 23456788889999998877743
No 137
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=44.78 E-value=31 Score=28.73 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++- +.|.+ -..|+++|.++||+|+.++-.
T Consensus 1 MkvlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEc--CCchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 6766553 33444 357899999999999998864
No 138
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=44.49 E-value=26 Score=28.75 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=31.5
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.+|+++|..+. --..+...|++.|.++|.+|.|..++
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 668888887643 35668999999999999999999985
No 139
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=44.43 E-value=1.3e+02 Score=24.52 Aligned_cols=139 Identities=11% Similarity=0.091 Sum_probs=80.4
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCC
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 355 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~ 355 (463)
++.|-|-+||.. +....+++...|+.++..+-+.+...+ ..|+.+.+ |+.+.. -...++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~----------~~~~a~-~~g~~V 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAH--------RTPDRLAD----------YARTAA-ERGLNV 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHH----------HHHHTT-TTTCCE
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEccc--------CCHHHHHH----------HHHHHH-hCCCcE
Confidence 456777788876 666788888899998887655444322 25555421 111100 012345
Q ss_pred cccccccCh----hhHHHHHhhCCceeccccccc--hhhhH-HHHHH--Hhhcee---ecC--CccCHHHHHHHHHHHhc
Q 012474 356 GGFWTHNGW----NSTLESICEGVPMICQPCFGD--QLVNA-RYVSH--VWRVGL---HLE--RKFERREIETAIRRVTV 421 (463)
Q Consensus 356 ~~~I~hgG~----~s~~eal~~GvP~l~~P~~~D--Q~~na-~rv~~--~~G~G~---~l~--~~~t~~~l~~~i~~~l~ 421 (463)
+|.=.|. .++.-++ .-+|+|.+|.... ....+ .-..+ . |+.+ .++ ...+..-+...|- -+.
T Consensus 80 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 154 (182)
T 1u11_A 80 --IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALY 154 (182)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGG
T ss_pred --EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccC
Confidence 8876664 3555554 4799999998642 11121 22333 3 5552 223 1355556665554 345
Q ss_pred cchHHHHHHHHHHHHHHHHHHH
Q 012474 422 EAEGQEMRERIMHLKEKLELSL 443 (463)
Q Consensus 422 ~~~~~~~~~~a~~~~~~~~~~~ 443 (463)
| +.++++.+..++..++..
T Consensus 155 d---~~l~~kL~~~r~~~~~~v 173 (182)
T 1u11_A 155 N---PALAARLETWRALQTASV 173 (182)
T ss_dssp C---HHHHHHHHHHHHHHHHHS
T ss_pred C---HHHHHHHHHHHHHHHHHH
Confidence 5 689999999988887643
No 140
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=43.99 E-value=26 Score=28.79 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=31.6
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.+|+++|..+. --..+...|++.|.++|.+|.|..++
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 668888887643 35678899999999999999999985
No 141
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=43.88 E-value=54 Score=27.70 Aligned_cols=103 Identities=9% Similarity=0.078 Sum_probs=55.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCCCCCCC---CCCCCceEEeCCCCCCCcccccccHHHHHHHH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGF--SITIIHTNFNSPNP---SNYPHFSFNSISESLWESEVSTENAISLLTVL 89 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (463)
|||+|+..|.. + -+..+.++|.+.+| +|..+.++...... ....|+.+..++..-. . +
T Consensus 2 ~rI~vl~SG~g-~--~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~---~---~-------- 64 (216)
T 2ywr_A 2 LKIGVLVSGRG-S--NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEF---P---S-------- 64 (216)
T ss_dssp EEEEEEECSCC-H--HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGS---S---S--------
T ss_pred CEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccc---c---c--------
Confidence 58998877764 2 36778888888888 77665553321110 1113555554432100 0 0
Q ss_pred HHhcCchHHH-HHHHHHhCCCCCCCceEEEeCCch-hhHHHHHHHcCCCeEEEeCc
Q 012474 90 NDKCVVPFQD-CLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 90 ~~~~~~~l~~-~l~~l~~~~~~~~~pD~VI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (463)
...+.+ .++.+.+ .+||+||+-.+. .-...+-+.....++-+.++
T Consensus 65 ----r~~~~~~~~~~l~~-----~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 ----KKEFEERMALELKK-----KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp ----HHHHHHHHHHHHHH-----TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred ----hhhhhHHHHHHHHh-----cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 011112 3333443 679999987653 33444555555567776666
No 142
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=43.79 E-value=9.5 Score=32.32 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++-.|. --..+|+.|.++||+|+++..+
T Consensus 1 M~iiIiG~G~-----~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGET-----TAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHH-----HHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCH-----HHHHHHHHHHhCCCeEEEEECC
Confidence 6788876432 3467899999999999999864
No 143
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=43.78 E-value=1.6e+02 Score=25.51 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=25.2
Q ss_pred CCceEEE-eCCch-hhHHHHHHHcCCCeEEEeCchh
Q 012474 112 EPVTCLI-TDAIW-HFAQTVADTLRLPRIVLRTSSI 145 (463)
Q Consensus 112 ~~pD~VI-~D~~~-~~~~~~A~~~giP~v~~~~~~~ 145 (463)
.-||+|| .|+.. .-+..=|..+|||+|.++-+.+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 3588877 56644 5577788889999999877643
No 144
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=43.52 E-value=21 Score=32.28 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+|||+++..+ ....+++++.++||+|.++...
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 4899998876 4678999999999999998874
No 145
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=43.37 E-value=15 Score=34.23 Aligned_cols=31 Identities=26% Similarity=0.259 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
.|||+|+-.|-.| +.+|-.|+++||+|+++=
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 3899998666434 888999999999999983
No 146
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=43.27 E-value=17 Score=31.30 Aligned_cols=34 Identities=26% Similarity=0.259 Sum_probs=28.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
...|||.|+-.|..|- .||+.|.++||+|+.+..
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 3579999999998874 588999999999988765
No 147
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=42.94 E-value=25 Score=25.93 Aligned_cols=38 Identities=13% Similarity=-0.008 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+.|||+++|..|.|+-.-...+-+.+.++|.++.+-..
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 45899999999988876667888888888988765443
No 148
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=42.75 E-value=34 Score=28.56 Aligned_cols=33 Identities=6% Similarity=0.169 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++- +.|.+ -..|+++|.++||+|+.++-.
T Consensus 1 MkilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLG--ATGRA--GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCCHH--HHHHHHHHHHCCCEEEEEEec
Confidence 6765553 33444 367899999999999999764
No 149
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=42.38 E-value=26 Score=30.45 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=32.0
Q ss_pred CCCcEEEEEcCCC--ccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPL--QGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~--~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.++|+.++++... .|=..-...|++.|.++|++|.++=+
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 4567777776664 38999999999999999999999853
No 150
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=42.34 E-value=21 Score=31.50 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+|+-.|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 688888776555 47889999999999998653
No 151
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=41.93 E-value=7.8 Score=37.42 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=28.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
..|||+++-.|-.| ..||+.|.+.||+|+++-.+
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 57999999887655 46999999999999999764
No 152
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=41.83 E-value=38 Score=30.80 Aligned_cols=78 Identities=10% Similarity=-0.127 Sum_probs=47.5
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcc
Q 012474 278 VMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGG 357 (463)
Q Consensus 278 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~ 357 (463)
.|+++-.+... +.+..+...+++.+..+.+...... ....+ + -...+...+++
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~-----------~~~~~-------~----~~~~~~~~~d~-- 85 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEK-----------GDAAR-------Y----VEEARKFGVAT-- 85 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCST-----------THHHH-------H----HHHHHHHTCSE--
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCc-----------chHHH-------H----HHHHHhcCCCE--
Confidence 45555444332 4567788888888887665543211 11100 0 01122234566
Q ss_pred cccccChhhHHHHH--------hhCCceecccc
Q 012474 358 FWTHNGWNSTLESI--------CEGVPMICQPC 382 (463)
Q Consensus 358 ~I~hgG~~s~~eal--------~~GvP~l~~P~ 382 (463)
+|.-||=||+.|++ ..++|+.++|.
T Consensus 86 vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 86 VIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred EEEEccchHHHHHHHHHhhcccCCCCeEEEecC
Confidence 99999999999985 35789999996
No 153
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=41.66 E-value=89 Score=23.09 Aligned_cols=43 Identities=12% Similarity=0.065 Sum_probs=33.0
Q ss_pred hccCCCCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeC
Q 012474 8 NVQQKKGRRVILFPLPLQGHINP-MLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 8 ~~~~~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~ 50 (463)
.....+.+||+++|..|.|.-.- ...|-+.+.+.|.++.+-..
T Consensus 15 ~~~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 15 LYFQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp CCCSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HhhcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 34455678899999999998774 67777888889998765443
No 154
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=41.59 E-value=38 Score=28.70 Aligned_cols=37 Identities=27% Similarity=0.303 Sum_probs=25.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
..+.|+|++.-. .|.+ -..|+++|.++||+|+.++-.
T Consensus 18 ~l~~~~ilVtGa--tG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 18 YFQGMRVLVVGA--NGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp ---CCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCCeEEEECC--CChH--HHHHHHHHHhCCCeEEEEECC
Confidence 345778776643 3433 357889999999999999864
No 155
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=41.48 E-value=40 Score=26.23 Aligned_cols=38 Identities=16% Similarity=0.249 Sum_probs=26.9
Q ss_pred CCcEEEEEcCC-CccCHH--HHHHHHHHHHhCCCeE-EEEeC
Q 012474 13 KGRRVILFPLP-LQGHIN--PMLQLASILYSKGFSI-TIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~-~~GH~~--p~l~La~~L~~rGh~V-t~~~~ 50 (463)
..||++|+-.. .+|+-. -.+.+|+++.+.||+| .++-.
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~ 52 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFY 52 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEe
Confidence 35777666555 446554 4678899999999999 66655
No 156
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=41.37 E-value=19 Score=27.90 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
-+.||+++-+|..| ..+++.|.++||+|+++..+.
T Consensus 6 ~~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 35688888765444 578999999999999998853
No 157
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=40.97 E-value=22 Score=29.22 Aligned_cols=37 Identities=8% Similarity=0.043 Sum_probs=29.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
||++.-.|+.|=+ =...+.++|.++|++|.++.++..
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A 40 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSS 40 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhH
Confidence 5777777775544 678999999999999999998643
No 158
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=40.17 E-value=11 Score=33.43 Aligned_cols=28 Identities=14% Similarity=0.231 Sum_probs=24.2
Q ss_pred CCCcccccccChhhHHHHHhh------CCceecccc
Q 012474 353 PAVGGFWTHNGWNSTLESICE------GVPMICQPC 382 (463)
Q Consensus 353 ~~~~~~I~hgG~~s~~eal~~------GvP~l~~P~ 382 (463)
+++ +|.=||=||+.+++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 466 9999999999999765 899999984
No 159
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=39.99 E-value=27 Score=31.91 Aligned_cols=81 Identities=9% Similarity=-0.109 Sum_probs=48.1
Q ss_pred EEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcc
Q 012474 278 VMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGG 357 (463)
Q Consensus 278 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~ 357 (463)
.|+++-.+......+.+..+...|+..+..+.+...... . ....+. .......+++
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~-------~-~a~~~~--------------~~~~~~~~d~-- 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKI-------G-DATLEA--------------ERAMHENYDV-- 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCST-------T-HHHHHH--------------HHHTTTTCSE--
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCc-------c-hHHHHH--------------HHHhhcCCCE--
Confidence 456665554332335567788888887766554433211 0 001110 1112234566
Q ss_pred cccccChhhHHHHHh------hCCceecccc
Q 012474 358 FWTHNGWNSTLESIC------EGVPMICQPC 382 (463)
Q Consensus 358 ~I~hgG~~s~~eal~------~GvP~l~~P~ 382 (463)
+|.-||=||+.|++. .++|+.++|.
T Consensus 84 vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 84 LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 999999999999853 4689999996
No 160
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=39.67 E-value=21 Score=32.65 Aligned_cols=39 Identities=8% Similarity=0.075 Sum_probs=29.1
Q ss_pred CCcEEEEEcCCCccCHH----HHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHIN----PMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~----p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
++|||+++..|..+-.. ....++++|.+.||+|..+...
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 47899999865433322 4677899999999999998753
No 161
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=39.27 E-value=27 Score=33.75 Aligned_cols=37 Identities=11% Similarity=0.164 Sum_probs=30.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCCCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSK-GF-SITIIHTNFN 53 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~ 53 (463)
++.|||.|+-.|..| +++|..|+++ || +|+++.....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 567999999888777 5789999999 99 9999876543
No 162
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=39.10 E-value=20 Score=33.07 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=28.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+..|||.|+-.|..| ..+|..|+++||+|++....
T Consensus 27 ~~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 447899999887765 46889999999999998774
No 163
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=39.09 E-value=1.1e+02 Score=24.67 Aligned_cols=115 Identities=9% Similarity=-0.023 Sum_probs=63.3
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCcee---eccChhhhhcC
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIV---KWAPQQEVLAH 352 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~vpq~~lL~~ 352 (463)
+.+++.-.|+++... ...+++.|.+.+.++-++...... +.. -++.+. .+.+.++.. .|+++-++-.+
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A~---~fi--~~~~l~-~l~~~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNGR---KFI--NGEILK-QFCDNYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGGG---GGS--CHHHHH-HHCSCEECTTTCTTCCHHHHHHT
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCHH---HHh--hHHHHH-HhcCCEEecCCCCccccccccch
Confidence 456666667766532 455677787778777666554321 101 133332 233322211 34556666556
Q ss_pred CCCcccccccChhhHHH-------------HHhhCCceeccccccc----h---hhhHHHHHHHhhcee
Q 012474 353 PAVGGFWTHNGWNSTLE-------------SICEGVPMICQPCFGD----Q---LVNARYVSHVWRVGL 401 (463)
Q Consensus 353 ~~~~~~I~hgG~~s~~e-------------al~~GvP~l~~P~~~D----Q---~~na~rv~~~~G~G~ 401 (463)
+++ .+|.=+-+||+.. ++..++|++++|-... . ..|-.++.+ +|+=+
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i 143 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVSI 143 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCEE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCEE
Confidence 664 3555566665443 4778999999995432 1 346667777 47643
No 164
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=38.92 E-value=25 Score=31.65 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=27.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.+.|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 446899999766544 6789999999999998755
No 165
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=38.90 E-value=25 Score=31.63 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=26.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++-.|+.|- .+|..|.++||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcC
Confidence 7899998888774 4688899999999999874
No 166
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=38.82 E-value=68 Score=25.45 Aligned_cols=38 Identities=5% Similarity=0.039 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
++|||+++.+++. ...-+....+.|.+.|++|+++++.
T Consensus 1 ~~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4689999998874 4445666778888899999999985
No 167
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=38.63 E-value=52 Score=29.93 Aligned_cols=36 Identities=8% Similarity=-0.015 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
+.+|||+|+. --+-...+.++|.++||+|..+.+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~p 55 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVP 55 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 3459999992 22333457789999999998776533
No 168
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=38.45 E-value=39 Score=30.54 Aligned_cols=36 Identities=14% Similarity=0.188 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.+.|||+|+..+..+ ....++|.++||+|..+.+.+
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 456999999888643 355688888999999887754
No 169
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=38.42 E-value=59 Score=23.80 Aligned_cols=39 Identities=8% Similarity=-0.005 Sum_probs=30.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.+||+++|..|.|-=.-...+-+.+.++|.++.+-..+
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 456899999998765566668888889999998876553
No 170
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=38.20 E-value=28 Score=29.16 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
-..|||+++-.|..| ..+|+.|.++||+|+++...
T Consensus 17 ~~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 17 FQGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred cCCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 347899998766544 56789999999999988653
No 171
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=38.11 E-value=1e+02 Score=25.85 Aligned_cols=103 Identities=9% Similarity=0.109 Sum_probs=57.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCC---CCCCCceEEeCCCCCCCcccccccHHHHHHHH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPNP---SNYPHFSFNSISESLWESEVSTENAISLLTVL 89 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (463)
|||+++-.|+ |+ -+.++.++|.+. +|+|..+.++...... ....|+.+..++..-. .+
T Consensus 4 ~ki~vl~sG~-g~--~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~------~~-------- 66 (212)
T 3av3_A 4 KRLAVFASGS-GT--NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDY------PS-------- 66 (212)
T ss_dssp EEEEEECCSS-CH--HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGS------SS--------
T ss_pred cEEEEEEECC-cH--HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccc------cc--------
Confidence 5888887776 43 366777888877 7899877664221111 1124566654432100 00
Q ss_pred HHhcCchHH-HHHHHHHhCCCCCCCceEEEeCCch-hhHHHHHHHcCCCeEEEeCc
Q 012474 90 NDKCVVPFQ-DCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 90 ~~~~~~~l~-~~l~~l~~~~~~~~~pD~VI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (463)
...+. +.++.+.+ .+||+||+-.+. .-...+-+.+...++-+.++
T Consensus 67 ----~~~~~~~~~~~l~~-----~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 ----KAAFESEILRELKG-----RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ----HHHHHHHHHHHHHH-----TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ----hhhhHHHHHHHHHh-----cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 01111 13333443 679999987653 44455556666667776666
No 172
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=37.91 E-value=33 Score=29.08 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
||.++++.++.| =-..++++|+++|++|.++..
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 677778776643 346889999999999988765
No 173
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=37.90 E-value=77 Score=26.71 Aligned_cols=106 Identities=7% Similarity=0.062 Sum_probs=57.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCCCCC---CCCCCCceEEeCCCCCCCcccccccHHHHHH
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYS-KGFSITIIHTNFNSPN---PSNYPHFSFNSISESLWESEVSTENAISLLT 87 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (463)
.+++||+++..+..+-+ ..|.++..+ .+++|..+.++..... .....|+.+..++..--+.
T Consensus 3 ~~~~riavl~SG~Gsnl---~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~~~------------ 67 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNL---QAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEFPS------------ 67 (215)
T ss_dssp -CCEEEEEEESSCCHHH---HHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGSSS------------
T ss_pred CCCcEEEEEEeCCcHHH---HHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCccccCc------------
Confidence 35789999988774433 444455444 3688888776432111 1122467666554210000
Q ss_pred HHHHhcCchHH-HHHHHHHhCCCCCCCceEEEeCCch-hhHHHHHHHcCCCeEEEeCc
Q 012474 88 VLNDKCVVPFQ-DCLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 88 ~~~~~~~~~l~-~~l~~l~~~~~~~~~pD~VI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (463)
..... +.++.+.+ .+||+||+-.+. .-...+-+.....++-+.++
T Consensus 68 ------r~~~d~~~~~~l~~-----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 ------RTDFESTLQKTIDH-----YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ------HHHHHHHHHHHHHT-----TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------hhHhHHHHHHHHHh-----cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00111 23344443 679999987654 44455556666667776666
No 174
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.39 E-value=31 Score=29.41 Aligned_cols=67 Identities=13% Similarity=0.128 Sum_probs=41.9
Q ss_pred CCCcccccccChhhHHHHHhhCCceecccccc-c----------------------hhhhHHHHHHHhhceeecCCccCH
Q 012474 353 PAVGGFWTHNGWNSTLESICEGVPMICQPCFG-D----------------------QLVNARYVSHVWRVGLHLERKFER 409 (463)
Q Consensus 353 ~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~-D----------------------Q~~na~rv~~~~G~G~~l~~~~t~ 409 (463)
+++ +|+.||........ .++|+|-++..+ | ....+..+.+.+|+-+....--++
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ 140 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITE 140 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCH
Confidence 667 99999998888875 579999999753 2 222233344323333332223456
Q ss_pred HHHHHHHHHHhcc
Q 012474 410 REIETAIRRVTVE 422 (463)
Q Consensus 410 ~~l~~~i~~~l~~ 422 (463)
+++.+.|+++..+
T Consensus 141 ee~~~~i~~l~~~ 153 (225)
T 2pju_A 141 EDARGQINELKAN 153 (225)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
Confidence 7777777776654
No 175
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=37.29 E-value=46 Score=29.98 Aligned_cols=36 Identities=14% Similarity=0.220 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
...|+|++.- +.|.+ -..|++.|.++||+|+.++-.
T Consensus 11 ~~~M~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 11 GAHVKYAVLG--ATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp -CCCEEEEES--TTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred ccCCEEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 3457877664 33433 357789999999999998764
No 176
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=37.28 E-value=41 Score=28.07 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++- +.|-+ -..++++|.++||+|+.++-.
T Consensus 1 M~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVG--STGRV--GKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 6766654 33433 368899999999999999864
No 177
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=37.25 E-value=38 Score=29.77 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=33.4
Q ss_pred CCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.+.+|+++++. |+.|-..-...||..|+++|.+|.++-.+.
T Consensus 79 ~~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 79 DSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp TCCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45667776664 467899999999999999999999997764
No 178
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=37.19 E-value=24 Score=30.68 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=32.9
Q ss_pred CCCcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
-.+||.+|++.|-. |-=.-...|+..|.+||++||.+--++
T Consensus 20 ~~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDP 63 (294)
T 2c5m_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (294)
T ss_dssp -CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEEC
T ss_pred eeceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCC
Confidence 35799999998843 556778899999999999999976543
No 179
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=36.97 E-value=1.7e+02 Score=23.81 Aligned_cols=139 Identities=14% Similarity=0.133 Sum_probs=77.5
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCC
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 355 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~ 355 (463)
-|.|-|-+||.. +....+++...|+.++.++-..+.... ..|+.+.+. +.+.+ =...++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--------R~p~~l~~~----------~~~a~-~~g~~V 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAH--------RTPDRMFEY----------AKNAE-ERGIEV 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--------TCHHHHHHH----------HHHTT-TTTCCE
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEccc--------CCHHHHHHH----------HHHHH-hCCCcE
Confidence 467888888877 666788888889988887655444322 255554221 11100 012344
Q ss_pred cccccccCh----hhHHHHHhhCCceeccccccc--hhhhH-HHHHHHh--hcee--e-cCCccCHHHHHHHHHHHhccc
Q 012474 356 GGFWTHNGW----NSTLESICEGVPMICQPCFGD--QLVNA-RYVSHVW--RVGL--H-LERKFERREIETAIRRVTVEA 423 (463)
Q Consensus 356 ~~~I~hgG~----~s~~eal~~GvP~l~~P~~~D--Q~~na-~rv~~~~--G~G~--~-l~~~~t~~~l~~~i~~~l~~~ 423 (463)
+|.=.|. .++.-++ .-+|+|.+|.... ....+ .-..+ + |+.+ + ++...+..-++..|- -+.|
T Consensus 72 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d- 145 (183)
T 1o4v_A 72 --IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY- 145 (183)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC-
T ss_pred --EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC-
Confidence 7776664 3444444 6789999998542 11222 22333 4 5322 2 122456666666565 3445
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 012474 424 EGQEMRERIMHLKEKLELSL 443 (463)
Q Consensus 424 ~~~~~~~~a~~~~~~~~~~~ 443 (463)
+.++++.+..++......
T Consensus 146 --~~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 146 --PEIARKVKEYKERMKREV 163 (183)
T ss_dssp --HHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 567777777777666543
No 180
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=36.92 E-value=29 Score=25.37 Aligned_cols=33 Identities=18% Similarity=0.349 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKG-FSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 51 (463)
.++|+++-. |.+ -..+++.|.++| |+|+++...
T Consensus 5 ~~~v~I~G~---G~i--G~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGA---GKI--GQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECC---SHH--HHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECC---CHH--HHHHHHHHHhCCCceEEEEeCC
Confidence 467887744 433 356899999999 999888763
No 181
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=36.74 E-value=18 Score=33.45 Aligned_cols=39 Identities=5% Similarity=0.011 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHI----NPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
++|||+++..+..+-. .-...++++|.++||+|..+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4789999986544433 34477889999999999998754
No 182
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=36.73 E-value=52 Score=27.28 Aligned_cols=47 Identities=11% Similarity=0.027 Sum_probs=36.2
Q ss_pred chHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCchhHHHH
Q 012474 95 VPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTSSISSFL 149 (463)
Q Consensus 95 ~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~ 149 (463)
....+.++++.+ .+.|+||.|.. +..+|+++|+|.+.+.++..+-..
T Consensus 129 ~e~~~~i~~l~~-----~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI~~ 175 (196)
T 2q5c_A 129 DEITTLISKVKT-----ENIKIVVSGKT---VTDEAIKQGLYGETINSGEESLRR 175 (196)
T ss_dssp GGHHHHHHHHHH-----TTCCEEEECHH---HHHHHHHTTCEEEECCCCHHHHHH
T ss_pred HHHHHHHHHHHH-----CCCeEEECCHH---HHHHHHHcCCcEEEEecCHHHHHH
Confidence 345667888887 67999999853 578999999999998886555433
No 183
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=36.67 E-value=32 Score=31.07 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=26.4
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
...++|+|++.- +.|.+ -..|+++|.++||+|+.+.-
T Consensus 16 ~~~~~~~vlVTG--asG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 16 PRGSHMRILITG--GAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp STTTCCEEEEET--TTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred ccCCCCEEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 345578776653 33444 36789999999999999876
No 184
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=36.59 E-value=38 Score=24.94 Aligned_cols=36 Identities=11% Similarity=0.175 Sum_probs=25.6
Q ss_pred EEEEEcCCC---ccCHHHHHHHHHHHHhC-CC-eEEEEeCC
Q 012474 16 RVILFPLPL---QGHINPMLQLASILYSK-GF-SITIIHTN 51 (463)
Q Consensus 16 ~il~~~~~~---~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~ 51 (463)
|++++-..+ .......+.+|..+.+. || +|+++-..
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 444444432 34566789999999999 99 99888764
No 185
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=36.58 E-value=34 Score=30.94 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
++|||+|+..+.. .....++|.+.||+|..+.+.+
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~p 36 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQP 36 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeCC
Confidence 5699999987653 2455677788899998777643
No 186
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=36.36 E-value=27 Score=31.62 Aligned_cols=32 Identities=9% Similarity=0.266 Sum_probs=26.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++-.|+.| ..+|..|.+.||+|+++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 899999887766 45788899999999999874
No 187
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=36.27 E-value=1.5e+02 Score=24.79 Aligned_cols=102 Identities=2% Similarity=-0.000 Sum_probs=58.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCC---CCCCCceEEeCCC-CCCCcccccccHHHHHHH
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTNFNSPNP---SNYPHFSFNSISE-SLWESEVSTENAISLLTV 88 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~---~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 88 (463)
|||+++..+..+ -+..|.+.+.+. +|+|..+.++...... ....|+.+..++. .+. +
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~-------~------- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFD-------S------- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCS-------S-------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCccccc-------c-------
Confidence 588888887743 367777777765 6888776664322111 1124676665432 111 0
Q ss_pred HHHhcCchHHH-HHHHHHhCCCCCCCceEEEeCCch-hhHHHHHHHcCCCeEEEeCc
Q 012474 89 LNDKCVVPFQD-CLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 89 ~~~~~~~~l~~-~l~~l~~~~~~~~~pD~VI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (463)
...+.+ .++.+.+ .+||+||+-.+. .-...+-+.+...++-+.++
T Consensus 64 -----r~~~~~~~~~~l~~-----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 64 -----REAYDRELIHEIDM-----YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -----HHHHHHHHHHHHGG-----GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----hhhccHHHHHHHHh-----cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 011222 3344443 679999987753 43455556666677777666
No 188
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=36.25 E-value=32 Score=31.38 Aligned_cols=42 Identities=19% Similarity=0.084 Sum_probs=33.7
Q ss_pred CCCcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 12 KKGRRVILFPL-PLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 12 ~~~~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
.+.++|+|+.. |+.|-..-...+|..|+++|++|.++..+..
T Consensus 13 ~~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 13 QRSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 34456666554 5669999999999999999999999998743
No 189
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=36.22 E-value=24 Score=31.89 Aligned_cols=31 Identities=19% Similarity=0.356 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (463)
..|||+++-.|+.| ..+|..|.+.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 47999999887766 56788899999999999
No 190
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=35.58 E-value=1.4e+02 Score=25.11 Aligned_cols=67 Identities=7% Similarity=-0.058 Sum_probs=39.0
Q ss_pred CCCCcccccccChhhHHHHH---------hhCCceecccc--ccchhhh-HHHHHHHhhcee--ecCC---ccCHHHHHH
Q 012474 352 HPAVGGFWTHNGWNSTLESI---------CEGVPMICQPC--FGDQLVN-ARYVSHVWRVGL--HLER---KFERREIET 414 (463)
Q Consensus 352 ~~~~~~~I~hgG~~s~~eal---------~~GvP~l~~P~--~~DQ~~n-a~rv~~~~G~G~--~l~~---~~t~~~l~~ 414 (463)
.+++ .++--||.||+-|.. .+++|++++-. ++|.... -..+.+. |.=. ..+. .-|++++.+
T Consensus 105 ~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~-Gfi~~~~~~~~~~~d~~ee~~~ 182 (216)
T 1ydh_A 105 EAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEE-GFIKPGARNIVVSAPTAKELME 182 (216)
T ss_dssp HCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHT-TSSCHHHHTTEEEESSHHHHHH
T ss_pred hCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHC-CCCChHHcCeEEEeCCHHHHHH
Confidence 4443 366789999988775 47999999874 2332222 2344443 5311 1111 457788888
Q ss_pred HHHHHh
Q 012474 415 AIRRVT 420 (463)
Q Consensus 415 ~i~~~l 420 (463)
.|.+..
T Consensus 183 ~l~~~~ 188 (216)
T 1ydh_A 183 KMEEYT 188 (216)
T ss_dssp HHHHCC
T ss_pred HHHHhc
Confidence 776533
No 191
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=35.48 E-value=1.7e+02 Score=26.63 Aligned_cols=110 Identities=15% Similarity=0.085 Sum_probs=0.0
Q ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCC
Q 012474 274 AAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHP 353 (463)
Q Consensus 274 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~ 353 (463)
.+..+++++.|+... ...+..+.|++.+.++=++--.. +.++|... -.+++...
T Consensus 215 ~g~dv~iia~Gs~~~----~a~~Aa~~L~~~Gi~v~vv~~~~-------l~P~d~~~---------------i~~~~~~~ 268 (341)
T 2ozl_B 215 QGTHITVVSHSRPVG----HCLEAAAVLSKEGVECEVINMRT-------IRPMDMET---------------IEASVMKT 268 (341)
T ss_dssp CCSSEEEEECSTHHH----HHHHHHHHHHTTTCCEEEEECCE-------EETCCHHH---------------HHHHHHHH
T ss_pred cCCCEEEEEeCHHHH----HHHHHHHHHHhcCCCeEEEeeee-------ecCCCHHH---------------HHHHHhcC
Q ss_pred CCccccc------ccChhh-HHHHHhh-------CCce--eccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHH
Q 012474 354 AVGGFWT------HNGWNS-TLESICE-------GVPM--ICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIR 417 (463)
Q Consensus 354 ~~~~~I~------hgG~~s-~~eal~~-------GvP~--l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~ 417 (463)
.. +|+ .||+++ +.+.+.. .+|+ +.+|-.+-.... ...++. .+|++.|.++++
T Consensus 269 ~~--vv~vEe~~~~Gg~g~~v~~~l~~~~~~~~l~~~v~~ig~~d~~~~~g~-~l~~~~---------g~~~~~I~~~i~ 336 (341)
T 2ozl_B 269 NH--LVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAK-ILEDNS---------IPQVKDIIFAIK 336 (341)
T ss_dssp SC--EEEECSSCSTTCHHHHHHHHHHHSTTGGGCSSCCEEECCCSSCCCSSH-HHHHTT---------SCCHHHHHHHHH
T ss_pred Ce--EEEEecCcccCcHHHHHHHHHHhhhcccccCCCEEEEecCCcCCCCcH-HHHHHh---------CcCHHHHHHHHH
Q ss_pred HHhc
Q 012474 418 RVTV 421 (463)
Q Consensus 418 ~~l~ 421 (463)
+++.
T Consensus 337 ~~l~ 340 (341)
T 2ozl_B 337 KTLN 340 (341)
T ss_dssp HHHT
T ss_pred HHhc
No 192
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=35.46 E-value=29 Score=30.90 Aligned_cols=37 Identities=5% Similarity=0.148 Sum_probs=28.4
Q ss_pred cEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGH---INPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH---~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6999999874321 234567999999999999998774
No 193
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=35.26 E-value=41 Score=29.99 Aligned_cols=40 Identities=13% Similarity=0.100 Sum_probs=31.0
Q ss_pred CCcE-EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 13 KGRR-VILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 13 ~~~~-il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
+++| |+|..-|+.|=..-...||..|+++|++|.++-.+.
T Consensus 39 ~~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 39 TGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3444 455545566888999999999999999999997754
No 194
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=35.26 E-value=29 Score=29.33 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
||.++++.++.| =-..++++|+++|++|.++...
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 677777777632 3468899999999999888753
No 195
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=35.19 E-value=1.4e+02 Score=22.21 Aligned_cols=30 Identities=17% Similarity=0.316 Sum_probs=20.6
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcCCCce
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPF 308 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 308 (463)
+..+++++.||+.. .....++.+++.+.++
T Consensus 13 g~dv~iv~~Gs~~~----~a~eA~~~L~~~Gi~v 42 (118)
T 3ju3_A 13 EADITFVTWGSQKG----PILDVIEDLKEEGISA 42 (118)
T ss_dssp SCSEEEEEEGGGHH----HHHHHHHHHHHTTCCE
T ss_pred CCCEEEEEECccHH----HHHHHHHHHHHCCCce
Confidence 34589999999764 5555666676666654
No 196
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=34.85 E-value=87 Score=25.39 Aligned_cols=41 Identities=7% Similarity=0.069 Sum_probs=31.9
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.++.+||+++.+++.. ..-+....+.|.+.|++|+++++..
T Consensus 6 ~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 6 DLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 3567899999887654 4556677788889999999999853
No 197
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=34.78 E-value=17 Score=32.49 Aligned_cols=31 Identities=10% Similarity=-0.039 Sum_probs=25.5
Q ss_pred hcCCCCcccccccChhhHHHHHhh----CCceecccc
Q 012474 350 LAHPAVGGFWTHNGWNSTLESICE----GVPMICQPC 382 (463)
Q Consensus 350 L~~~~~~~~I~hgG~~s~~eal~~----GvP~l~~P~ 382 (463)
-..+++ +|+-||=||+.+++.. ++|++.++.
T Consensus 61 ~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 61 GQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred ccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 345677 9999999999999743 889999983
No 198
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=34.73 E-value=53 Score=27.07 Aligned_cols=38 Identities=5% Similarity=0.061 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGH----INPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+.+|+|.+++... +. ..-...|++.|+++|+.|..-..
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG 52 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGG 52 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 3468999998776 43 34567888888999998665543
No 199
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=34.71 E-value=40 Score=28.77 Aligned_cols=23 Identities=13% Similarity=0.220 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 012474 30 PMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 30 p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
--.++|++|+++|++|++++.+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 45788999999999999987643
No 200
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=34.67 E-value=21 Score=31.94 Aligned_cols=33 Identities=18% Similarity=0.034 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 46899999766555 4688999999999998854
No 201
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=34.58 E-value=1.7e+02 Score=23.19 Aligned_cols=136 Identities=11% Similarity=0.089 Sum_probs=72.8
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCc
Q 012474 277 SVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVG 356 (463)
Q Consensus 277 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 356 (463)
+.|-|-+||.. +....++....++.++.++-+.+...+ ..|+.+.+ |+...+--..+++
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saH--------R~p~~~~~----------~~~~a~~~~~~~V- 61 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAH--------KTAEHVVS----------MLKEYEALDRPKL- 61 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTT--------TCHHHHHH----------HHHHHHTSCSCEE-
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEccc--------CCHHHHHH----------HHHHhhhcCCCcE-
Confidence 45677778766 566678888888888877555444322 15555422 1111110012344
Q ss_pred ccccccChh----hHHHHHhhCCceecccccc---chhhhHHHHHHHh--hceee-cCCccCHHHHHHHHHHHhccchHH
Q 012474 357 GFWTHNGWN----STLESICEGVPMICQPCFG---DQLVNARYVSHVW--RVGLH-LERKFERREIETAIRRVTVEAEGQ 426 (463)
Q Consensus 357 ~~I~hgG~~----s~~eal~~GvP~l~~P~~~---DQ~~na~rv~~~~--G~G~~-l~~~~t~~~l~~~i~~~l~~~~~~ 426 (463)
+|.=.|.. ++.-++ .-+|+|.+|... +-.+ -.-..+ + |+.+. ++...+..-++..|-.+ .| +
T Consensus 62 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv~~~~nAa~lA~~Il~~-~d---~ 133 (159)
T 3rg8_A 62 -YITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALVLEPKNAALLAARIFSL-YD---K 133 (159)
T ss_dssp -EEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEECCSHHHHHHHHHHHHTT-TC---H
T ss_pred -EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEecCchHHHHHHHHHHhC-CC---H
Confidence 88776643 444443 568999999653 2222 122222 2 44432 22245555555544433 34 5
Q ss_pred HHHHHHHHHHHHHHH
Q 012474 427 EMRERIMHLKEKLEL 441 (463)
Q Consensus 427 ~~~~~a~~~~~~~~~ 441 (463)
.++++.+..++...+
T Consensus 134 ~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 134 EIADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 778888777776664
No 202
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=34.34 E-value=37 Score=30.15 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|+|+++ |+.|.+ -..++++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 4566665 344555 356789999999999988764
No 203
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=34.31 E-value=45 Score=28.61 Aligned_cols=33 Identities=15% Similarity=0.044 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
||.++++.++. - =-..++++|+++|++|+++.-
T Consensus 1 mk~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCAT-G--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 56677776653 2 346789999999999988765
No 204
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=34.15 E-value=52 Score=29.11 Aligned_cols=38 Identities=5% Similarity=-0.049 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQ-GHIN---PMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~-GH~~---p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+|||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478999876543 2322 4468999999999999998874
No 205
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=34.08 E-value=41 Score=25.24 Aligned_cols=38 Identities=16% Similarity=0.068 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccCH--HHHHHHHHHHHhCC--CeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHI--NPMLQLASILYSKG--FSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~--~p~l~La~~L~~rG--h~Vt~~~~~ 51 (463)
.||++|+-..+.-.. +..+..|....++| |+|.++...
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 488888877754222 44778899999999 899998873
No 206
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=34.00 E-value=50 Score=29.72 Aligned_cols=34 Identities=3% Similarity=0.045 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSK-G-FSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~ 51 (463)
|++|+|+++..+.. .++++.|.+. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 56799999866554 4789999886 7 888887664
No 207
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=34.00 E-value=22 Score=34.17 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=53.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCC--CCCCcc---cccccHHHHH
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISE--SLWESE---VSTENAISLL 86 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~---~~~~~~~~~~ 86 (463)
+.+||-+|++.. +=.-++.+|+.|.+.|++|. .|.. -.....+ .|+.+..+.+ ++|+.. ..+-++.-.-
T Consensus 7 ~~~i~~aLISVs---DK~glvelAk~L~~lGfeI~-ATgG-Tak~L~e-~GI~v~~V~~vTgfPEil~GRVKTLHP~ihg 80 (523)
T 3zzm_A 7 RRPIRRALISVY---DKTGLVDLAQGLSAAGVEII-STGS-TAKTIAD-TGIPVTPVEQLTGFPEVLDGRVKTLHPRVHA 80 (523)
T ss_dssp CCCCCEEEEEES---SCTTHHHHHHHHHHTTCEEE-ECHH-HHHHHHT-TTCCCEEHHHHHSCCCCTTTTSSSCSHHHHH
T ss_pred cccccEEEEEEe---ccccHHHHHHHHHHCCCEEE-Ecch-HHHHHHH-cCCceeeccccCCCchhhCCccccCCchhhh
Confidence 445666666663 34457899999999999965 3321 1111222 4666666652 444433 3333443222
Q ss_pred HHHHHhcCchHHHHHHHHHhCCCCCCCceEEEeCCchhhHH
Q 012474 87 TVLNDKCVVPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQ 127 (463)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~ 127 (463)
..+.+ ....+.++.+.+..= .+.|+||++- +++-.
T Consensus 81 GiLa~---r~~~~h~~~l~~~~i--~~iDlVvvNL-YPF~~ 115 (523)
T 3zzm_A 81 GLLAD---LRKSEHAAALEQLGI--EAFELVVVNL-YPFSQ 115 (523)
T ss_dssp HHHCC---TTSHHHHHHHHHHTC--CCCSEEEEEC-CCHHH
T ss_pred hhccC---CCCHHHHHHHHHCCC--CceeEEEEeC-CChHH
Confidence 22222 222333333433221 5689999984 44333
No 208
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=33.83 E-value=49 Score=30.01 Aligned_cols=39 Identities=5% Similarity=0.079 Sum_probs=26.8
Q ss_pred HHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeCc
Q 012474 100 CLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 100 ~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~~ 143 (463)
.++++.+ .+||+||..........--+..|+|++.+...
T Consensus 108 n~E~i~a-----l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 108 NTEACVA-----ATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CHHHHHH-----TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CHHHHHh-----cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 4677776 68999998754332333445679999988654
No 209
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=33.49 E-value=42 Score=28.60 Aligned_cols=35 Identities=9% Similarity=-0.037 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
..|.++++.++. - =-..+++.|+++|++|+++.-.
T Consensus 6 ~~k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGRG-A--LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTTS-H--HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCCc-H--HHHHHHHHHHhCCCEEEEEeCC
Confidence 345666666553 2 3467899999999999988753
No 210
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=33.27 E-value=34 Score=28.46 Aligned_cols=32 Identities=28% Similarity=0.267 Sum_probs=23.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||+++- +.|.+- ..+++.|.++||+|+++..
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeC
Confidence 6788874 234332 4678999999999998764
No 211
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=33.22 E-value=27 Score=32.60 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=31.0
Q ss_pred ccCCCCcEEEEEcCCCccCHHH----HHHHHHHHHhCCCeEEEEeCC
Q 012474 9 VQQKKGRRVILFPLPLQGHINP----MLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p----~l~La~~L~~rGh~Vt~~~~~ 51 (463)
-..|++|||+++..|..+---- ...++++|.+.||+|+.+...
T Consensus 17 ~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 17 QGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp ----CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 3457899999999886664443 448888888899999998864
No 212
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=33.04 E-value=44 Score=29.61 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
++|||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 468999997776664 467888899999987654
No 213
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=32.93 E-value=53 Score=27.77 Aligned_cols=39 Identities=10% Similarity=0.157 Sum_probs=26.8
Q ss_pred CCCc-EEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGR-RVILFPLPLQG----HINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~-~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.++| +|.+++....+ +..-...|++.|+++|+.|..-..
T Consensus 6 ~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp CCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 3455 59998766554 334678888899999998754433
No 214
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=32.93 E-value=46 Score=28.97 Aligned_cols=38 Identities=13% Similarity=0.154 Sum_probs=27.3
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.++..+|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 21 ~~m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 21 QSMSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp ---CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred hhccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 34556788888887642 346899999999999987754
No 215
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=32.84 E-value=62 Score=28.98 Aligned_cols=37 Identities=8% Similarity=-0.065 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQG-H---INPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
++||+++..+..+ | +.....++++|.++||+|..+.+
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~ 53 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDP 53 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeC
Confidence 6789998887544 2 34678999999999999999985
No 216
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=32.69 E-value=62 Score=26.11 Aligned_cols=42 Identities=26% Similarity=0.404 Sum_probs=34.9
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
..++++.|++.-.++.|=..-...|++.|..+|+.|.++..+
T Consensus 9 ~~~~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d 50 (186)
T 2yvu_A 9 CIEKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGD 50 (186)
T ss_dssp CCSCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred ccCCCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHH
Confidence 335677888888889999888999999999999999888653
No 217
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=32.67 E-value=28 Score=32.13 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCCccCHHH----HHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINP----MLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p----~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|++|||+++..|..+---- ...++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 4578999999886664433 448888888899999998864
No 218
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=32.52 E-value=42 Score=29.97 Aligned_cols=34 Identities=15% Similarity=0.107 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|+|+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECC
Confidence 3455554 4445553 46889999999999998764
No 219
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=32.47 E-value=93 Score=23.32 Aligned_cols=37 Identities=14% Similarity=0.039 Sum_probs=23.5
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEE
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWV 311 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~ 311 (463)
++.+|+++.||........+..+...+++....+.+.
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 4579999999965333345666777776544444444
No 220
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=32.45 E-value=90 Score=26.27 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKG-FSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 51 (463)
.|+.++++.++ |-+ -..|+++|.++| |+|+.++-.
T Consensus 22 ~mk~vlVtGat-G~i--G~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 22 HMKNVLILGAG-GQI--ARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CCEEEEEETTT-SHH--HHHHHHHHTTCTTEEEEEEESS
T ss_pred cccEEEEEeCC-cHH--HHHHHHHHHhCCCceEEEEEcC
Confidence 45555555443 433 367899999999 999998864
No 221
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=32.35 E-value=37 Score=29.47 Aligned_cols=40 Identities=18% Similarity=0.080 Sum_probs=30.5
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 14 GRRVILFP--LPLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 14 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
.+|++.+. -|+.|=..-...||..|+++|++|.++-.+..
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~ 58 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFL 58 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 34444443 33568899999999999999999999877643
No 222
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=32.12 E-value=25 Score=31.74 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=25.0
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGF--SITIIHTN 51 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~ 51 (463)
+..+.|||+++-.|+.|- .+|..|..+|| +|+++...
T Consensus 3 ~~~~~mkI~IiGaG~vG~-----~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 3 TTVKPTKLAVIGAGAVGS-----TLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp ----CCEEEEECCSHHHH-----HHHHHHHHTTCCSEEEEECSS
T ss_pred cCCCCCEEEEECCCHHHH-----HHHHHHHhCCCCCEEEEEeCC
Confidence 445578999987644333 36778899999 99998764
No 223
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=32.07 E-value=42 Score=29.49 Aligned_cols=37 Identities=14% Similarity=0.087 Sum_probs=25.5
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
++.+.|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 20 ~m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp -----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3456678888887743 346789999999999988765
No 224
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=32.04 E-value=44 Score=30.39 Aligned_cols=40 Identities=10% Similarity=0.067 Sum_probs=27.3
Q ss_pred hhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 7 SNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 7 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+...+.+.|+|++.- +.|-+ -..|+++|.++||+|+.++-
T Consensus 20 ~~~~~~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 20 RKELPAQPKVWLITG--VAGFI--GSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp HHHHHHSCCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred chhcCccCCeEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 334445567776653 33433 35788999999999999875
No 225
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=31.98 E-value=41 Score=29.42 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||++.- + |.+- ..|+++|.++||+|+.++-.
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 6777774 4 6554 46889999999999999864
No 226
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=31.89 E-value=42 Score=29.97 Aligned_cols=30 Identities=20% Similarity=0.451 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
||.|+-.|..| .++|+.|.++||+|+++-.
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLEAGYELVVWNR 36 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEC--
T ss_pred cEEEEecHHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 79999888776 4789999999999988643
No 227
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=31.83 E-value=97 Score=27.28 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=22.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||++.- +.|.+ -..|+++|.++||+|+.+...
T Consensus 1 m~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTG--GAGFI--GSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEEC--CCChH--HHHHHHHHHhCCCEEEEEeCC
Confidence 5655543 33444 357899999999999988653
No 228
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=31.71 E-value=44 Score=24.68 Aligned_cols=40 Identities=5% Similarity=-0.110 Sum_probs=27.1
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..+.|||+++|..|.|--.-...+-++..++|.+|.+...
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~ 42 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSG 42 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEc
Confidence 4578999999998865444444555555567999988653
No 229
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=31.69 E-value=1.5e+02 Score=21.90 Aligned_cols=47 Identities=15% Similarity=0.164 Sum_probs=33.0
Q ss_pred CCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 374 GVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 374 GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
.+|++++--..+.. ...+..+ .|+--.+.+.++.++|...|++++..
T Consensus 78 ~~pii~~t~~~~~~-~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 78 TLPILMLTAQGDIS-AKIAGFE-AGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp TCCEEEEECTTCHH-HHHHHHH-HTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CccEEEEecCCCHH-HHHHHHh-cCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 67887776544433 3444445 37766666679999999999999976
No 230
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=31.65 E-value=61 Score=24.58 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=20.3
Q ss_pred ChhchhhhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012474 1 MERQKESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 1 ~~~~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
|++.........+.|||+++- .|-.-...+.+.|.+.|++|+.+.
T Consensus 1 ms~~~~~~~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~ 45 (143)
T 3m6m_D 1 MSNPFLRHRARVRSMRMLVAD----DHEANRMVLQRLLEKAGHKVLCVN 45 (143)
T ss_dssp --------------CEEEEEC----SSHHHHHHHHHHHHC--CEEEEES
T ss_pred CCchhhccccccccceEEEEe----CCHHHHHHHHHHHHHcCCeEEEeC
Confidence 555444444556788998884 455556667777777798887543
No 231
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=31.53 E-value=1.1e+02 Score=22.80 Aligned_cols=48 Identities=8% Similarity=0.099 Sum_probs=29.5
Q ss_pred CCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 374 GVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 374 GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
.+|+|++--..|.....+.+... |+--.+.+.++.++|...|+.++..
T Consensus 72 ~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 72 ETVRIIITGYTDSASMMAAINDA-GIHQFLTKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TSEEEEEESCTTCHHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHhh-chhhhccCCCCHHHHHHHHHHHHHH
Confidence 56776665444433333333431 4533444469999999999999865
No 232
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=31.52 E-value=1.5e+02 Score=21.45 Aligned_cols=47 Identities=9% Similarity=0.167 Sum_probs=33.0
Q ss_pred hCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhc
Q 012474 373 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTV 421 (463)
Q Consensus 373 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~ 421 (463)
..+|++++--..+ .....+..+ .|+--.+.+.++.++|.+.|++++.
T Consensus 75 ~~~pii~~s~~~~-~~~~~~~~~-~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGG-EEDESLALS-LGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCS-HHHHHHHHH-TTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCc-hHHHHHHHh-cChhhhccCCCCHHHHHHHHHHHhc
Confidence 3578877765443 344555556 3876666667999999999999875
No 233
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=31.49 E-value=45 Score=26.43 Aligned_cols=37 Identities=14% Similarity=0.079 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
..+++++..|. | +.|++.+++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 46788887775 3 999999999999999999999 6443
No 234
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=31.39 E-value=70 Score=26.06 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+||+++.- +.|-+ -..++++|. +||+|+++...
T Consensus 2 ~kM~vlVtG--asg~i--G~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIG--ASGTL--GSAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEET--TTSHH--HHHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEc--CCcHH--HHHHHHHHH-CCCeEEEEecC
Confidence 457855443 33444 467899999 99999988753
No 235
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.34 E-value=54 Score=28.34 Aligned_cols=33 Identities=18% Similarity=0.112 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.|.++++.++.| =-..+|++|+++|++|.++..
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 367777776643 346789999999999888765
No 236
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=31.33 E-value=61 Score=25.65 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=27.5
Q ss_pred cEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (463)
|||+++=+..+|+..-+. .|++.|.+.|++|.++.-
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 678887777789887654 578888889999888755
No 237
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=31.31 E-value=42 Score=28.94 Aligned_cols=33 Identities=9% Similarity=-0.102 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
||.++++.++.| + -..+++.|+++|++|.++.-
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 577788776643 3 35789999999999887643
No 238
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=31.30 E-value=58 Score=27.47 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=26.0
Q ss_pred CCc-EEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEe
Q 012474 13 KGR-RVILFPLPLQGH----INPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 13 ~~~-~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
++| +|.+++....+- ..-...|+++|+++|+.|+.-.
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGG 52 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGG 52 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECC
Confidence 445 599997776642 2356788888999998876543
No 239
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=31.20 E-value=74 Score=27.03 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=23.2
Q ss_pred CCceEEEeCCchhh-------HHHHHHHcCCCeEEEeCc
Q 012474 112 EPVTCLITDAIWHF-------AQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 112 ~~pD~VI~D~~~~~-------~~~~A~~~giP~v~~~~~ 143 (463)
.+||+|++|..... +..+...+++|+|.+.=+
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 56999999987643 234555668999987655
No 240
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=31.09 E-value=26 Score=31.71 Aligned_cols=31 Identities=23% Similarity=0.170 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 688888776555 4568889999999999876
No 241
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=31.04 E-value=26 Score=32.30 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=26.0
Q ss_pred c-EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 R-RVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~-~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
| ||+|+-.|..| ..+|..|.++||+|+++...
T Consensus 15 M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 15 LNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 5 89999887655 46789999999999998653
No 242
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=31.04 E-value=45 Score=31.72 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||+|+-.|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 789998766555 5688899999999998865
No 243
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=30.87 E-value=46 Score=30.04 Aligned_cols=35 Identities=9% Similarity=0.130 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
+|||+|+..+..+ .+..++|.++||+|..+.+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCC
Confidence 5999999888654 3556888899999988777543
No 244
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=30.49 E-value=49 Score=29.88 Aligned_cols=36 Identities=8% Similarity=0.205 Sum_probs=22.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+.|+|++.- +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 17 ~~~~~vlVtG--atG~iG--~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 17 RGSHMILVTG--SAGRVG--RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ----CEEEET--TTSHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred cCCCEEEEEC--CCChHH--HHHHHHHHhCCCEEEEEeCC
Confidence 4466666553 334443 46789999999999998764
No 245
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=30.35 E-value=30 Score=31.07 Aligned_cols=32 Identities=13% Similarity=0.018 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+|||+|+-.|+.|- .+|..|. +||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 48999998887664 5678888 99999999874
No 246
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=30.32 E-value=64 Score=26.38 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (463)
.|||+++-....|+..-+. .+++.|.+.|++|.++.-
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3588888777678766544 466777778999988865
No 247
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=30.27 E-value=83 Score=27.06 Aligned_cols=38 Identities=13% Similarity=0.337 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQ----------G-HINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~----------G-H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+||+++..... | ...=+....+.|.+.|++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357777766531 2 3345777888899999999999984
No 248
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=30.27 E-value=27 Score=31.46 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGF-SITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~ 50 (463)
+..|||.|+-.|..| ..+|+.|+++|| +|+++..
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 346899999776655 578999999999 9888765
No 249
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=30.16 E-value=45 Score=28.69 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=26.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
....|||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 16 ~~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3558999999666544 56789999999999988653
No 250
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=30.14 E-value=34 Score=27.70 Aligned_cols=35 Identities=11% Similarity=-0.027 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSK-GFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 51 (463)
..++||+++-.|.. -..+++.|.++ ||+|+++...
T Consensus 37 ~~~~~v~IiG~G~~-----G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 37 PGHAQVLILGMGRI-----GTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CTTCSEEEECCSHH-----HHHHHHHHHHHHCSCEEEEESC
T ss_pred CCCCcEEEECCCHH-----HHHHHHHHHhccCCeEEEEECC
Confidence 44778999854433 35678999999 9999998764
No 251
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=30.03 E-value=57 Score=28.73 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=30.7
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 15 RRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 15 ~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
+|++.+.. |+.|-..-...||..|+++|++|.++-.+.
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 45555544 466899999999999999999999987754
No 252
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=29.97 E-value=80 Score=28.67 Aligned_cols=73 Identities=11% Similarity=0.144 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHH
Q 012474 289 VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTL 368 (463)
Q Consensus 289 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~ 368 (463)
.+.+....+.+++.....+.||.+.++.. .. ++.++++...+-+++.. ||-+.-.....
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~lD~~~i~~~PK~--~~GySDiTaL~ 120 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYN-----------SN--------GLLKYLDYDLIRENPKF--FCGYSDITALN 120 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------GG--------GGGGGCCHHHHHTSCCE--EEECGGGHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-----------HH--------HHHhhcChhHHHhCCeE--EEEecchHHHH
Confidence 34556777888888877788887776541 11 56677776666677887 88777777777
Q ss_pred HHHh--hCCceecccc
Q 012474 369 ESIC--EGVPMICQPC 382 (463)
Q Consensus 369 eal~--~GvP~l~~P~ 382 (463)
-|++ .|++.+-=|.
T Consensus 121 ~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 121 NAIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHHCBCEEECCC
T ss_pred HHHHHhhCCcEEEccc
Confidence 7776 4777766665
No 253
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=29.97 E-value=24 Score=31.59 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSK-----G-FSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~ 50 (463)
+|||+|+-.|..|. .+|..|.++ | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 48999998777663 567888888 9 99999865
No 254
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=29.78 E-value=53 Score=28.45 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=31.4
Q ss_pred CCCcEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLP--LQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.+++|++.+..+ +.|=..-...||..|+ +|++|.++-.+.
T Consensus 24 ~~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 24 NKKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp --CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 456777777555 5588899999999999 999999997754
No 255
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=29.63 E-value=56 Score=25.22 Aligned_cols=37 Identities=14% Similarity=0.329 Sum_probs=26.8
Q ss_pred cEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINP-MLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++-...+|+..- ...|++.|.++|++|.++...
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 4677766666787764 444677788889999988764
No 256
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=29.61 E-value=42 Score=29.86 Aligned_cols=32 Identities=16% Similarity=0.343 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.|||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 3 m~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMG-----APMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4789999877766 4678999999999998854
No 257
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=29.57 E-value=58 Score=27.67 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=22.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
||.++++.++ |-+ -..++++|+++||+|+++.-
T Consensus 1 Mk~vlVtGas-g~i--G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAITGSA-SGI--GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp -CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEeCCC-cHH--HHHHHHHHHhCCCEEEEEeC
Confidence 4455555444 433 45688999999999998875
No 258
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=29.56 E-value=38 Score=29.91 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 789998766544 5678999999999998755
No 259
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=29.47 E-value=42 Score=28.99 Aligned_cols=40 Identities=18% Similarity=0.155 Sum_probs=31.0
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 13 KGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 13 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
++||++.+.. |+.|-..-...||..|+++|++|.++-.+.
T Consensus 4 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 4 AKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp -CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3556665543 456888899999999999999999997754
No 260
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=29.43 E-value=54 Score=32.45 Aligned_cols=40 Identities=10% Similarity=0.080 Sum_probs=36.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.++.+|++.+.++-.|-....-++..|..+|++|..+...
T Consensus 96 ~~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 96 KTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CCSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 3478999999999999999999999999999999998874
No 261
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=29.35 E-value=22 Score=30.07 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
++.|||+|+-.|..| ..+|+.|.++||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 456899999766544 4688999999999998554
No 262
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=29.31 E-value=31 Score=30.75 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQG-H---INPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+|||+++..+..+ | +.-...++++|.++||+|..+...
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 47899999877432 2 344678899999999999998874
No 263
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=29.05 E-value=69 Score=26.53 Aligned_cols=37 Identities=11% Similarity=0.120 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3567777788878888899999999999998877655
No 264
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=28.94 E-value=44 Score=29.57 Aligned_cols=33 Identities=9% Similarity=0.171 Sum_probs=23.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|+|+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 3 ~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 3 NKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECC
T ss_pred cEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECC
Confidence 455554 4445553 46789999999999988763
No 265
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=28.82 E-value=50 Score=28.43 Aligned_cols=37 Identities=8% Similarity=0.085 Sum_probs=25.3
Q ss_pred HHHHHHhCCCCCCCceEEEeCCchh--hHHHHHHHcCCCeEEEe
Q 012474 100 CLAKLISNGDQEEPVTCLITDAIWH--FAQTVADTLRLPRIVLR 141 (463)
Q Consensus 100 ~l~~l~~~~~~~~~pD~VI~D~~~~--~~~~~A~~~giP~v~~~ 141 (463)
.++++.+ .+||+||...... ....--+..|+|++.+.
T Consensus 51 n~E~i~~-----l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEGILA-----MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHHHHT-----TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHc-----cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 4566766 6899999876542 22334456789999875
No 266
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=28.80 E-value=44 Score=28.36 Aligned_cols=41 Identities=15% Similarity=0.129 Sum_probs=32.2
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhC-CCeEEEEeCCCC
Q 012474 13 KGRRVILFPL--PLQGHINPMLQLASILYSK-GFSITIIHTNFN 53 (463)
Q Consensus 13 ~~~~il~~~~--~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~ 53 (463)
++||++.+.. |+.|-..-...||..|+++ |++|.++-.+..
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 3456555543 5679999999999999999 999999987654
No 267
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=28.50 E-value=1.1e+02 Score=28.09 Aligned_cols=35 Identities=14% Similarity=0.132 Sum_probs=24.1
Q ss_pred eEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEc
Q 012474 277 SVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVR 313 (463)
Q Consensus 277 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~ 313 (463)
.+++++.|+.+. ......+.++|.+.|+++.+.+.
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 477777776542 23355678888888888887764
No 268
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.46 E-value=43 Score=28.00 Aligned_cols=33 Identities=18% Similarity=0.424 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|+|+++ |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 5 ~~ilIt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFV--GSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHH--HHHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchH--HHHHHHHHHHCCCEEEEEEcC
Confidence 566655 333444 357899999999999998874
No 269
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=28.18 E-value=60 Score=29.40 Aligned_cols=36 Identities=17% Similarity=0.094 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|.+|+|++.-. .|.+ -..|+++|.++||+|+.++-.
T Consensus 8 M~~~~IlVtGa--tG~i--G~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGA--TGFI--GQFVATASLDAHRPTYILARP 43 (346)
T ss_dssp ---CCEEEECT--TSHH--HHHHHHHHHHTTCCEEEEECS
T ss_pred CCCCeEEEECC--CcHH--HHHHHHHHHHCCCCEEEEECC
Confidence 45677776644 3433 356889999999999998874
No 270
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=28.00 E-value=1.1e+02 Score=25.83 Aligned_cols=76 Identities=12% Similarity=0.034 Sum_probs=40.7
Q ss_pred eeccCh-hhhh-cCCCCcccccccChhhHHHHHh---------hCCceecccc--ccchhhh-HHHHHHHhhcee--ecC
Q 012474 341 VKWAPQ-QEVL-AHPAVGGFWTHNGWNSTLESIC---------EGVPMICQPC--FGDQLVN-ARYVSHVWRVGL--HLE 404 (463)
Q Consensus 341 ~~~vpq-~~lL-~~~~~~~~I~hgG~~s~~eal~---------~GvP~l~~P~--~~DQ~~n-a~rv~~~~G~G~--~l~ 404 (463)
..+.+. ..++ ..++. .++--||.||+-|... +++|++++-. ++|...+ -....+. |.=. ..+
T Consensus 96 ~~~f~~Rk~~~~~~sda-~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~-Gfi~~~~~~ 173 (215)
T 2a33_A 96 VADMHQRKAEMAKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEE-GFISPTARE 173 (215)
T ss_dssp ESSHHHHHHHHHHTCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHH-TSSCHHHHT
T ss_pred cCCHHHHHHHHHHhCCE-EEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHc-CCCCHHHCC
Confidence 344454 3333 34443 4667899999988762 4899998875 3332222 2333332 4311 111
Q ss_pred C---ccCHHHHHHHHHH
Q 012474 405 R---KFERREIETAIRR 418 (463)
Q Consensus 405 ~---~~t~~~l~~~i~~ 418 (463)
. .-|++++.+.|.+
T Consensus 174 ~~~~~d~~ee~~~~l~~ 190 (215)
T 2a33_A 174 IIVSAPTAKELVKKLEE 190 (215)
T ss_dssp TEEEESSHHHHHHHHHC
T ss_pred eEEEeCCHHHHHHHHHH
Confidence 1 3467777766654
No 271
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=27.94 E-value=53 Score=29.19 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|||.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 6799999877766 46889999999999988653
No 272
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=27.94 E-value=77 Score=27.35 Aligned_cols=41 Identities=10% Similarity=0.134 Sum_probs=28.1
Q ss_pred cCCCCcEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCeEEEEeC
Q 012474 10 QQKKGRRVILFPLPLQ--GHINPMLQ-LASILYSKGFSITIIHT 50 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~--GH~~p~l~-La~~L~~rGh~Vt~~~~ 50 (463)
..+..|||+++..... |...-+.. +++.|.+.|++|.++--
T Consensus 30 ~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 30 FSTHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred ccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 3455789988887754 55545444 56667778999988764
No 273
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=27.92 E-value=58 Score=26.65 Aligned_cols=36 Identities=11% Similarity=0.156 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (463)
.|||+++-.. .|+..-+. .+++.|.+.|++|.++.-
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 4789888888 88776544 355666667999998865
No 274
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=27.89 E-value=35 Score=25.96 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+|+++-. |.+ -..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRF--GGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 46777764 333 256789999999999988764
No 275
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=27.69 E-value=42 Score=30.63 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=25.1
Q ss_pred HHHHHHhCCCCCCCceEEEeCCchh-hHHHHHHHcCCCeEEEeC
Q 012474 100 CLAKLISNGDQEEPVTCLITDAIWH-FAQTVADTLRLPRIVLRT 142 (463)
Q Consensus 100 ~l~~l~~~~~~~~~pD~VI~D~~~~-~~~~~A~~~giP~v~~~~ 142 (463)
.++++.+ .+||+||...... ......+.+|||++.+..
T Consensus 88 n~E~Ila-----l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 88 DLESLIT-----LQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CHHHHHH-----HCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CHHHHhc-----CCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 4566665 5799999865422 123345678999998754
No 276
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=27.63 E-value=40 Score=30.38 Aligned_cols=33 Identities=6% Similarity=-0.001 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKG-FSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 51 (463)
.|||.|+-.|..| ..+|+.|+++| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 4789999877655 78899999999 999987653
No 277
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=27.61 E-value=1.3e+02 Score=22.82 Aligned_cols=48 Identities=15% Similarity=-0.007 Sum_probs=30.4
Q ss_pred hCCceeccccccchhhhHHHHHHHhh-ceeecCCccCHHHHHHHHHHHhcc
Q 012474 373 EGVPMICQPCFGDQLVNARYVSHVWR-VGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 373 ~GvP~l~~P~~~DQ~~na~rv~~~~G-~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
..+|+|++--..|... .....+ .| +--.+.+.++.++|.++|+.++..
T Consensus 75 ~~~~ii~~s~~~~~~~-~~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTT-AMEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHH-HHHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHH-HHHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 3566666654444333 334444 26 533444469999999999999976
No 278
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=27.59 E-value=42 Score=29.67 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 6789987776664 578889999999988754
No 279
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=27.53 E-value=50 Score=25.43 Aligned_cols=36 Identities=11% Similarity=0.172 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (463)
||++++-...+|+..-+. .|++.|.++|++|.++.-
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 677777666678765443 456667777999988754
No 280
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=27.49 E-value=72 Score=27.30 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+.|.++++.++ |-+ -..++++|+++|++|+++.-
T Consensus 18 ~~k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 18 RDKGVLVLAAS-RGI--GRAVADVLSQEGAEVTICAR 51 (249)
T ss_dssp TTCEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEcC
Confidence 55566666665 322 45789999999999988765
No 281
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=27.39 E-value=77 Score=24.63 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=27.6
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 17 VILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 17 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+++..+..-.+.+.+.+|...++.|++|+++.+.
T Consensus 11 ~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 11 SIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 33444445678889999999999999999998874
No 282
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=27.26 E-value=86 Score=27.84 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=26.4
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
.+++|||+++... .....+.+.|.+.||+|.+..
T Consensus 4 ~~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 4 MLTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred cccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 3678999888543 356677899999999998764
No 283
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=27.19 E-value=44 Score=29.47 Aligned_cols=31 Identities=16% Similarity=0.257 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
.|||+|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 37999997766664 46888999999998764
No 284
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=27.12 E-value=88 Score=23.75 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 012474 14 GRRVILFPLPLQGHIN--------PMLQLASILYSKGFSIT 46 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~--------p~l~La~~L~~rGh~Vt 46 (463)
.||.++++.|-.|... .+-..|..|.++||.+.
T Consensus 7 ~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 7 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 5788899999777632 45567777889999654
No 285
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=27.03 E-value=20 Score=18.14 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=13.5
Q ss_pred ChhhHHHHHhhCCceec
Q 012474 363 GWNSTLESICEGVPMIC 379 (463)
Q Consensus 363 G~~s~~eal~~GvP~l~ 379 (463)
|.|++...++.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888764
No 286
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=26.91 E-value=43 Score=28.12 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=23.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|||+++-.|..| ..+++.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 45889999644333 4578889999999998765
No 287
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=26.90 E-value=1.7e+02 Score=20.60 Aligned_cols=35 Identities=9% Similarity=0.043 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.+..+|++++..+ ......++.|.+.|++|..+..
T Consensus 54 ~~~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 54 NDNETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp CTTSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 3456788888544 4567888999999998887754
No 288
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=26.86 E-value=61 Score=28.87 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+|+++ |+.|.+ -..|+++|.++||+|+.++-.
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECC
Confidence 55554 444554 357889999999999988764
No 289
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=26.78 E-value=78 Score=28.35 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=23.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.|+|++.- +.|.+ -..|+++|.++||+|+.+.-.
T Consensus 2 ~~~~vlVtG--atG~i--G~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALITG--IRGQD--GAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp -CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEEC--CCChH--HHHHHHHHHHCCCEEEEEECC
Confidence 346666553 33444 357889999999999988753
No 290
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=26.75 E-value=40 Score=30.03 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
-+||+|+-.|..|+ .+|..|+++||+|+++..
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 45799998776665 588899999999998765
No 291
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=26.66 E-value=74 Score=28.12 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCCCccCHHH--HHHHHHHHHhCC-CeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINP--MLQLASILYSKG-FSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p--~l~La~~L~~rG-h~Vt~~~~~ 51 (463)
.++.|||++.. ..+|-.+ ...|++.|.+.| ++|++....
T Consensus 2 ~~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITG-QNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEES-CCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEcC-CCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 46789999944 4488644 357777788888 999999864
No 292
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=26.48 E-value=64 Score=28.98 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=22.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|+|++. |+.|.+ -..|+++|.++||+|+.+..
T Consensus 1 m~vlVT--GatG~i--G~~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVT--GGSGYI--GSHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEec
Confidence 565554 444544 35789999999999998754
No 293
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=26.46 E-value=1.5e+02 Score=23.53 Aligned_cols=125 Identities=17% Similarity=0.143 Sum_probs=65.2
Q ss_pred CCeEEEEecCCcccCC-HH-HHHHHHHHHhcCCCceEEEEcCCCCCCCccCC---C-CchhHHHHhcCCCceeeccChhh
Q 012474 275 AKSVMYVSFGSIVVVN-VT-EFLEIAWGLANSRVPFLWVVRPGLVPGVEWLE---P-LPKGFLEMLDGRGHIVKWAPQQE 348 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~-~~-~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~vpq~~ 348 (463)
+...||++ |...... .. .++.+.+.|++.+ .++ +.....+...... . ....+ +.-...
T Consensus 10 ~~~kVYLA-Gp~~~~~~~~~~~~~i~~~l~~~G-~V~--~~~~~~p~~~~~g~~~~~~~~~i------------~~~d~~ 73 (165)
T 2khz_A 10 APCSVYFC-GSIRGGREDQALYARIVSRLRRYG-KVL--TEHVADAELEPLGEEAAGGDQFI------------HEQDLN 73 (165)
T ss_dssp CCCEEEEE-CCCSSCSHHHHHHHHHHHHHHHHS-EES--GGGTTTTSSSCCSTTSTTCHHHH------------HHHHHH
T ss_pred CCeEEEEE-CCCCCcHHHHHHHHHHHHHHHhcC-Ccc--cccccCchhhccccccccCHHHH------------HHHHHH
Confidence 34579996 4444322 22 4677888898887 543 2111111100000 0 00011 112345
Q ss_pred hhcCCCCccccc---ccChhhHHHH---HhhCCceeccccccc-hhhhHHHHHHHhhcee--ecCC-ccCHHHHHHHHHH
Q 012474 349 VLAHPAVGGFWT---HNGWNSTLES---ICEGVPMICQPCFGD-QLVNARYVSHVWRVGL--HLER-KFERREIETAIRR 418 (463)
Q Consensus 349 lL~~~~~~~~I~---hgG~~s~~ea---l~~GvP~l~~P~~~D-Q~~na~rv~~~~G~G~--~l~~-~~t~~~l~~~i~~ 418 (463)
.+..|++ +|- .-..||.+|. .+.|+|++++---.+ ...|+- ++ |... .+.. ..+.+++...|.+
T Consensus 74 ~i~~aD~--vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~~---g~~~~~~~~~~~y~~~el~~~l~~ 147 (165)
T 2khz_A 74 WLQQADV--VVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-IR---GAADGSRFQVWDYAEGEVETMLDR 147 (165)
T ss_dssp HHHHCSE--EEEECSSCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-HH---HTCCSSSEEEEECCTTTHHHHHHH
T ss_pred HHHhCCE--EEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-hc---ccCccceeEEEecCHHHHHHHHHH
Confidence 6777877 543 4568999996 788999999721111 233333 32 4443 1222 3377778777777
Q ss_pred Hhc
Q 012474 419 VTV 421 (463)
Q Consensus 419 ~l~ 421 (463)
.+.
T Consensus 148 ~~~ 150 (165)
T 2khz_A 148 YFE 150 (165)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 294
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=26.46 E-value=1.3e+02 Score=24.75 Aligned_cols=38 Identities=21% Similarity=0.385 Sum_probs=27.8
Q ss_pred CcEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRV-ILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~i-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.|| +++..+...+-.....+++.|++.|+.|.++.-.
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 3454 4444445567777889999999999999987753
No 295
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=26.41 E-value=1.7e+02 Score=26.77 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|+|++. |+.|-+ -..|+++|.++||+|+.+.-.
T Consensus 29 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISIT--GAGGFI--ASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEE--CCccHH--HHHHHHHHHHCCCeEEEEECC
Confidence 4566555 333433 356889999999999998764
No 296
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=26.29 E-value=80 Score=29.26 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.|+|+++-.|. .-+..|..|.++||+|+++-..
T Consensus 2 ~~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 2 KSKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred CcCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 458898886664 3577899999999999999764
No 297
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=26.24 E-value=50 Score=28.87 Aligned_cols=31 Identities=23% Similarity=0.246 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||+|+-.|..| ..+++.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 688888765544 4678889999999888754
No 298
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=26.23 E-value=53 Score=29.23 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=23.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+++.++++.++ |-+ -..|+++|.++||+|+.+.-.
T Consensus 10 ~~~~~vlVTGat-G~i--G~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 10 HGSMRALITGVA-GFV--GKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp ---CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred cCcceEEEECCC-ChH--HHHHHHHHHHCCCEEEEEecC
Confidence 344444555443 544 357899999999999998764
No 299
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=26.12 E-value=56 Score=24.25 Aligned_cols=65 Identities=11% Similarity=0.014 Sum_probs=46.3
Q ss_pred hcCCCCcccccccChhh---------HHHHHhhCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHh
Q 012474 350 LAHPAVGGFWTHNGWNS---------TLESICEGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVT 420 (463)
Q Consensus 350 L~~~~~~~~I~hgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l 420 (463)
+..+++ +|--.|..| +-.|...|+|++++=..+.+. .-..+++. +.- +- .-+.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~--iV-~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSE--VV-GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSE--EE-CSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cce--ec-cCCHHHHHHHHHhcc
Confidence 567888 999999988 667889999999988777542 22224442 322 12 478899999998876
Q ss_pred c
Q 012474 421 V 421 (463)
Q Consensus 421 ~ 421 (463)
+
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 300
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=26.09 E-value=44 Score=25.22 Aligned_cols=41 Identities=22% Similarity=0.158 Sum_probs=25.7
Q ss_pred hHHHHHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHH---cCCCeEEEe
Q 012474 96 PFQDCLAKLISNGDQEEPVTCLITDAIW--HFAQTVADT---LRLPRIVLR 141 (463)
Q Consensus 96 ~l~~~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~---~giP~v~~~ 141 (463)
.-.+.++.+.. .+||+||.|... ..|..+++. .++|.+.++
T Consensus 41 ~g~eAl~~~~~-----~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 41 RMQEALDIARK-----GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CHHHHHHHHHH-----CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CHHHHHHHHHh-----CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 34456676665 679999999855 233444444 467765543
No 301
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=26.06 E-value=67 Score=28.68 Aligned_cols=29 Identities=17% Similarity=0.402 Sum_probs=25.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
||.|+-.|..| .++|+.|.++||+|++.-
T Consensus 5 kIgfIGlG~MG-----~~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 5 QIAFIGLGHMG-----APMATNLLKAGYLLNVFD 33 (300)
T ss_dssp EEEEECCSTTH-----HHHHHHHHHTTCEEEEEC
T ss_pred EEEEeeehHHH-----HHHHHHHHhCCCeEEEEc
Confidence 79999998877 478999999999999874
No 302
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=26.05 E-value=1.8e+02 Score=24.95 Aligned_cols=35 Identities=11% Similarity=0.068 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+-|+++++.++.| =-.++|+.|+++|.+|.++.-.
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 10 AGQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGLD 44 (242)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4688999988864 2478999999999999988764
No 303
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=25.98 E-value=88 Score=26.66 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.|.++++.++ |- =-..++++|+++|++|.++.-
T Consensus 15 ~k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r 47 (247)
T 1uzm_A 15 SRSVLVTGGN-RG--IGLAIAQRLAADGHKVAVTHR 47 (247)
T ss_dssp CCEEEETTTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 3566777665 32 346789999999999998865
No 304
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=25.96 E-value=98 Score=19.36 Aligned_cols=31 Identities=23% Similarity=0.382 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 012474 425 GQEMRERIMHLKEKLELSLLEAGSSYQSLERLVDH 459 (463)
Q Consensus 425 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~ 459 (463)
+..++++...++.+++ .-|+++.-+..+.+.
T Consensus 4 waefkqrlaaiktrlq----alggseaelaafeke 34 (73)
T 2a3d_A 4 WAEFKQRLAAIKTRLQ----ALGGSEAELAAFEKE 34 (73)
T ss_dssp HHHHHHHHHHHHHHHH----HCSSGGGTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----HhcCcHHHHHHHHHH
Confidence 4578889999999888 466665544444443
No 305
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=25.91 E-value=66 Score=28.89 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=22.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+|+|++.- +.|-+ -..|+++|.++||+|+.+.-
T Consensus 5 ~~~vlVTG--atG~i--G~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTG--GAGYI--GSHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEec--CCcHH--HHHHHHHHHHCCCcEEEEec
Confidence 45665543 33433 25789999999999998865
No 306
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=25.82 E-value=44 Score=32.25 Aligned_cols=35 Identities=11% Similarity=0.148 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
-..|||.++-.|..| +.+|..|+++||+|+++...
T Consensus 6 ~~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 347999999777655 67889999999999998653
No 307
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=25.78 E-value=88 Score=26.58 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=27.9
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
....+.|.++++.++.| --..+++.|+++|++|.++..
T Consensus 9 ~~~~~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSG---IGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp CCCCTTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcC
Confidence 34456667777777643 346889999999999988765
No 308
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=25.68 E-value=35 Score=30.61 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
...|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 7 ~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 456899999766544 4789999999999988744
No 309
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=25.59 E-value=45 Score=31.88 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 899999666444 67899999999999988764
No 310
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=25.39 E-value=60 Score=25.10 Aligned_cols=35 Identities=11% Similarity=0.058 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
..+++++..|. =+.|++.+++.|.++|.+|+++ ..
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 45788887765 4899999999999999999999 54
No 311
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=25.35 E-value=1.2e+02 Score=25.36 Aligned_cols=37 Identities=11% Similarity=0.155 Sum_probs=27.9
Q ss_pred EEEEEcCC---------CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 16 RVILFPLP---------LQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 16 ~il~~~~~---------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
||+++... ..-...-+....+.|.+.|++|+++++..
T Consensus 7 kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 7 RVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp EEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 78887772 22355667778888999999999999853
No 312
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=25.31 E-value=1.1e+02 Score=27.27 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=25.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..+.|+|++.- +.|.+ -..|++.|.++||+|+.+.-
T Consensus 8 ~~~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 8 LPEGSLVLVTG--ANGFV--ASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SCTTCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEEC--CccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 34567776653 33444 35688999999999998875
No 313
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=25.25 E-value=64 Score=27.73 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHI--NPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.+.-++++..|+.+|- ..+..+|+.|+++|+.|..+-.
T Consensus 54 ~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~ 93 (259)
T 4ao6_A 54 SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93 (259)
T ss_dssp CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECC
T ss_pred CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeecc
Confidence 3446788888887774 3578899999999998877655
No 314
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=25.20 E-value=53 Score=31.52 Aligned_cols=26 Identities=19% Similarity=0.351 Sum_probs=19.4
Q ss_pred ccCHHHHH---HHHHHHHhCCCeEEEEeC
Q 012474 25 QGHINPML---QLASILYSKGFSITIIHT 50 (463)
Q Consensus 25 ~GH~~p~l---~La~~L~~rGh~Vt~~~~ 50 (463)
.||+.+++ .|++-|..+|++|+++..
T Consensus 38 iGHar~~v~~D~l~R~lr~~G~~V~~v~~ 66 (461)
T 1li5_A 38 IGHGRTFVAFDVVARYLRFLGYKLKYVRN 66 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred ccccHHHHHHHHHHHHHHHcCCCEEEeec
Confidence 38887643 566677778999999975
No 315
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=25.14 E-value=36 Score=33.08 Aligned_cols=36 Identities=11% Similarity=0.267 Sum_probs=28.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
...|-||+++-.|.-| +.+|+.|.++|++||++...
T Consensus 39 ~~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 3446699998776544 57889999999999999874
No 316
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=25.10 E-value=1.2e+02 Score=24.40 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=24.9
Q ss_pred CCCcEEEEE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILF-PLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+..|++++ ...+. .-.=+..-.+.|.+.|++|++++..
T Consensus 5 ~~t~~~v~il~~~gF-e~~E~~~p~~~l~~ag~~V~~~s~~ 44 (177)
T 4hcj_A 5 GKTNNILYVMSGQNF-QDEEYFESKKIFESAGYKTKVSSTF 44 (177)
T ss_dssp CCCCEEEEECCSEEE-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECCCCc-cHHHHHHHHHHHHHCCCEEEEEECC
Confidence 334454444 33333 2333566677888999999999985
No 317
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=25.03 E-value=2.4e+02 Score=22.47 Aligned_cols=54 Identities=0% Similarity=-0.022 Sum_probs=35.2
Q ss_pred HHHHHh---hCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 367 TLESIC---EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 367 ~~eal~---~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
+.+.+. ..+|+|++--..|. ..+....+ .|+--.+.+.++.++|...|+.++..
T Consensus 69 l~~~~~~~~~~~~ii~lt~~~~~-~~~~~a~~-~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 69 IAALLAAGTPRTTLVALVEYESP-AVLSQIIE-LECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp HHHHHHHSCTTCEEEEEECCCSH-HHHHHHHH-HTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCEEEEEcCCCh-HHHHHHHH-cCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 444444 45777777654444 34555556 37765555568899999999888865
No 318
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=24.97 E-value=66 Score=29.39 Aligned_cols=34 Identities=9% Similarity=0.146 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|+|+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEECC
Confidence 5666665 4445443 46789999999999998753
No 319
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=24.95 E-value=1.5e+02 Score=24.06 Aligned_cols=40 Identities=8% Similarity=0.038 Sum_probs=30.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
...+||+++.+++.. ..-+....+.|.+.|++|++++...
T Consensus 21 ~~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 21 GLSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp TCCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred ccCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 446789999998754 3445667788888999999999854
No 320
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=24.85 E-value=63 Score=27.81 Aligned_cols=39 Identities=8% Similarity=-0.021 Sum_probs=25.1
Q ss_pred HHHHHHhCCCCCCCceEEEeCCch-hhHHHHHHHcCCCeEEEeCc
Q 012474 100 CLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 100 ~l~~l~~~~~~~~~pD~VI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (463)
.++++.+ .+||+||..... ......-+..|||++.+...
T Consensus 52 n~E~i~~-----l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 52 NVEAVKK-----LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp CHHHHHH-----TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred CHHHHHh-----cCCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 3556665 679999986533 22234456679999887543
No 321
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=24.85 E-value=66 Score=29.93 Aligned_cols=34 Identities=12% Similarity=0.060 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
++.+||+++..+.. .+.+++++.+.|++|.+++.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~ 38 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTM 38 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEEC
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcC
Confidence 56789999877754 36689999999999999965
No 322
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=24.74 E-value=90 Score=25.67 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+..++++..+..|...-+..+++.|.++|+.|..+-.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 4456677777777777889999999999999877664
No 323
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=24.62 E-value=68 Score=28.97 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
++.|+|++.- +.|.+ -..|+++|.++||+|+.++-.
T Consensus 23 ~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 23 FSPKTWLITG--VAGFI--GSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp HSCCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCeEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4467777653 33544 357899999999999998763
No 324
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.62 E-value=87 Score=25.98 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILY-SKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~-~rGh~Vt~~~~~ 51 (463)
||.++++.++ |-+ -..++++|. ++||+|+.++-.
T Consensus 5 mk~vlVtGas-g~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAA-GQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTT-SHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCC-cHH--HHHHHHHHHhcCCceEEEEecC
Confidence 5644444433 333 468899999 899999998764
No 325
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=24.59 E-value=94 Score=26.90 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|.++++.++.| =-..+|++|+++|++|.++..
T Consensus 28 ~~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 28 TGKNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp SCCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4467777776643 346899999999999988876
No 326
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=24.57 E-value=2.6e+02 Score=22.08 Aligned_cols=129 Identities=15% Similarity=0.132 Sum_probs=71.7
Q ss_pred EEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhc--CCCCc
Q 012474 279 MYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLA--HPAVG 356 (463)
Q Consensus 279 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~--~~~~~ 356 (463)
|-|-+||.. +....++....++.++.++=.-+...+ ..|+.+.+ +.. ..++
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~saH--------R~p~~~~~----------------~~~~a~~~V- 54 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASAH--------RTPELVEE----------------IVKNSKADV- 54 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TCHHHHHH----------------HHHHCCCSE-
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEccc--------CCHHHHHH----------------HHHhcCCCE-
Confidence 445567755 666778888888888877544444322 25655522 111 1144
Q ss_pred ccccccChh----hHHHHHhhCCceeccccccchhhhHHH--HHH--Hhhce--eec-CCccCHHHHHHHHHHHhccchH
Q 012474 357 GFWTHNGWN----STLESICEGVPMICQPCFGDQLVNARY--VSH--VWRVG--LHL-ERKFERREIETAIRRVTVEAEG 425 (463)
Q Consensus 357 ~~I~hgG~~----s~~eal~~GvP~l~~P~~~DQ~~na~r--v~~--~~G~G--~~l-~~~~t~~~l~~~i~~~l~~~~~ 425 (463)
+|.=.|.. ++.-++ .-+|+|.+|....-...... ..+ . |+. .+- +...+..-+...|. -+.|
T Consensus 55 -iIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~vqmP~-gvpVatV~I~~~~nAa~lA~~Il-~~~d--- 127 (157)
T 2ywx_A 55 -FIAIAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSSVQMPP-GIPVATVGIDRGENAAILALEIL-ALKD--- 127 (157)
T ss_dssp -EEEEEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHHHSCCT-TSCCEECCTTCHHHHHHHHHHHH-TTTC---
T ss_pred -EEEEcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHHhcCCC-CCeeEEEecCCcHHHHHHHHHHH-hcCC---
Confidence 77766643 444444 36899999983221112222 222 2 433 221 22455666665554 3445
Q ss_pred HHHHHHHHHHHHHHHH
Q 012474 426 QEMRERIMHLKEKLEL 441 (463)
Q Consensus 426 ~~~~~~a~~~~~~~~~ 441 (463)
+.++++.+..+++.++
T Consensus 128 ~~l~~kl~~~r~~~~~ 143 (157)
T 2ywx_A 128 ENIAKKLIEYREKMKK 143 (157)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6788888888887774
No 327
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.55 E-value=93 Score=27.75 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
...|+|++.- +.|-+ -..|+++|.++||+|+.++-.
T Consensus 12 ~~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 12 SMTRSALVTG--ITGQD--GAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ---CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEEC--CCChH--HHHHHHHHHHCCCeEEEEeCC
Confidence 4567776653 33444 357889999999999998764
No 328
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=24.42 E-value=59 Score=28.64 Aligned_cols=33 Identities=21% Similarity=0.178 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+.+||+|+-.|..| ..+|+.|+++||+|+++..
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 34689999655444 5789999999999998754
No 329
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=24.30 E-value=79 Score=27.03 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=29.7
Q ss_pred EEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 16 RVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 16 ~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
|++.+.. |+.|-..-...||..|+++|++|.++-.+.
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4555433 466899999999999999999999987754
No 330
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=24.30 E-value=83 Score=30.41 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+..||.|+-.++.| +-.+|+.|.++|++|+..=.
T Consensus 21 ~~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D~ 54 (494)
T 4hv4_A 21 RVRHIHFVGIGGAG----MGGIAEVLANEGYQISGSDL 54 (494)
T ss_dssp -CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEEC
Confidence 35789999999876 44589999999999997643
No 331
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=24.27 E-value=38 Score=29.42 Aligned_cols=29 Identities=28% Similarity=0.217 Sum_probs=22.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITII 48 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 48 (463)
|||.|+-.|..| ..+|+.|.+.||+|++.
T Consensus 1 M~I~iIG~G~mG-----~~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVA-----QTLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHH-----HHHHHHHHHCCCeEEEe
Confidence 688888666555 35789999999999884
No 332
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=24.26 E-value=65 Score=31.45 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=29.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+.+||.|+-.++.| |-.+|+.|.++|++|+..=.
T Consensus 18 ~~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~ 51 (524)
T 3hn7_A 18 QGMHIHILGICGTF----MGSLALLARALGHTVTGSDA 51 (524)
T ss_dssp -CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cCCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECC
Confidence 46899999999876 77899999999999998755
No 333
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=24.22 E-value=45 Score=29.08 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=24.8
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012474 18 ILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 18 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
+++.+|..|+-.-+..+++.|+++|++|..+-
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~D 85 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPR 85 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 44557777777778899999999999876543
No 334
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=24.19 E-value=51 Score=30.68 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=26.5
Q ss_pred hccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 8 NVQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 8 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
...+.+.++|+|+-.|- .-+.+|..|+++|++|+++=.
T Consensus 17 ~~~~~~~~dV~IVGaG~-----aGl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 17 NLYFQGHMKAIVIGAGI-----GGLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp ------CCEEEEECCSH-----HHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCCCCEEEEECCCH-----HHHHHHHHHHhCCCCEEEEeC
Confidence 34445688999987664 347889999999999999955
No 335
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=24.13 E-value=1.1e+02 Score=27.66 Aligned_cols=72 Identities=10% Similarity=0.112 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHHH
Q 012474 290 NVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTLE 369 (463)
Q Consensus 290 ~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~e 369 (463)
+.+....+.+++.....+.||...++.. .. ++.++++...+-++|+. ||-+.-..++.-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~LD~~~i~~~PK~--~~GySDiT~L~~ 121 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFN-----------SN--------QLLPYLDYDLISENPKI--LCGFSDITALAT 121 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------GG--------GGGGGCCHHHHHHSCCE--EEECTTHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchh-----------HH--------HHhhhcchhhhccCCeE--EEecccccHHHH
Confidence 4556777888888878888887766531 11 56677777777777777 776666666666
Q ss_pred HHh--hCCceecccc
Q 012474 370 SIC--EGVPMICQPC 382 (463)
Q Consensus 370 al~--~GvP~l~~P~ 382 (463)
+++ .|+..+.=|+
T Consensus 122 al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 122 AIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhcCeEEEeCcc
Confidence 664 3555444443
No 336
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.13 E-value=70 Score=29.54 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=32.8
Q ss_pred CCCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPL--PLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+++|++.+.. |+.|-..-...||..|+++|++|.++-.+
T Consensus 140 ~~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 140 NDKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TTSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 44667666654 57799999999999999999999999865
No 337
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=24.08 E-value=3.1e+02 Score=22.68 Aligned_cols=142 Identities=12% Similarity=-0.039 Sum_probs=74.4
Q ss_pred CCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCch----hHHHHhcCCCceeec--cChhh
Q 012474 275 AKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPK----GFLEMLDGRGHIVKW--APQQE 348 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--vpq~~ 348 (463)
++.+++.-.|+.+.. +....+++.|.+.+..+-++.......-.... ...+ .+. ...++-...++ +++-.
T Consensus 7 ~k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~~-~~~~~~~~~l~-~l~g~~v~~~~~~~~hi~ 82 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTTDTKF-GESSEWINKIK-QITEEPIVDSMVKAEPFG 82 (201)
T ss_dssp TCEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCTTCCT-TCSCHHHHHHH-HHCCSCCBCSHHHHGGGT
T ss_pred CCEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHHHHHh-hchhHHHHHHH-HHhCCCeEeecCcccccc
Confidence 355666666776653 12334555666667776665554321110100 0111 222 22222122211 12333
Q ss_pred hhcCCCCcccccccChhhHHH----------------HHhhCCceecccc----ccchhhhHHHHHHHhhceeecCC---
Q 012474 349 VLAHPAVGGFWTHNGWNSTLE----------------SICEGVPMICQPC----FGDQLVNARYVSHVWRVGLHLER--- 405 (463)
Q Consensus 349 lL~~~~~~~~I~hgG~~s~~e----------------al~~GvP~l~~P~----~~DQ~~na~rv~~~~G~G~~l~~--- 405 (463)
+-..+++ .+|.=|-+||+.. ++..++|++++|- ....+.|..++.+ +|+=+.-+.
T Consensus 83 ~s~~aD~-mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~ 160 (201)
T 3lqk_A 83 PKTPLDC-MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQD 160 (201)
T ss_dssp TTSCCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEES
T ss_pred cccccCE-EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCcc
Confidence 2233332 3555565554432 2557999999995 3566779999998 586544332
Q ss_pred ---------ccCHHHHHHHHHHHhcc
Q 012474 406 ---------KFERREIETAIRRVTVE 422 (463)
Q Consensus 406 ---------~~t~~~l~~~i~~~l~~ 422 (463)
-.+.+.|.+.|.++|++
T Consensus 161 ~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 161 NPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp CTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred ccccCCCcccCCHHHHHHHHHHHHhc
Confidence 13457888888888875
No 338
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=24.02 E-value=21 Score=31.77 Aligned_cols=32 Identities=19% Similarity=0.056 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+|+-.|+.|- .+|..|.++||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 7899998877664 5788888899999999874
No 339
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=23.90 E-value=69 Score=27.49 Aligned_cols=37 Identities=11% Similarity=-0.004 Sum_probs=24.4
Q ss_pred HHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEe
Q 012474 100 CLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLR 141 (463)
Q Consensus 100 ~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~ 141 (463)
.++++.+ .+||+||..... .....--+..|||++.+.
T Consensus 51 n~E~i~~-----l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 51 SSEGILS-----LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CHHHHHT-----TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHc-----cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 4666665 689999986542 222334456899998764
No 340
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.83 E-value=82 Score=26.54 Aligned_cols=33 Identities=6% Similarity=0.023 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|.++++.++. - =-..++++|+++|++|+++.-.
T Consensus 4 k~vlITGas~-g--IG~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 4 GKVIVYGGKG-A--LGSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp EEEEEETTTS-H--HHHHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEECCCc-H--HHHHHHHHHHHCCCEEEEEecC
Confidence 4566665553 2 3468999999999999988753
No 341
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=23.78 E-value=48 Score=30.86 Aligned_cols=42 Identities=5% Similarity=0.018 Sum_probs=30.5
Q ss_pred cCCCCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 10 QQKKGRRVILFPLPLQGH----INPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
..|++|||+++..|..+- +.-...++++|.+.||+|+.+...
T Consensus 33 ~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 33 GSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp ----CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred ccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 346788999999886553 346778888888889999998864
No 342
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=23.78 E-value=1e+02 Score=25.43 Aligned_cols=38 Identities=11% Similarity=0.101 Sum_probs=27.9
Q ss_pred CCcEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPML-QLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 50 (463)
+.|||+++-....|+..-+. .+++.|.+.|++|.++.-
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 45788888777778776544 456667778999988865
No 343
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=23.74 E-value=1.5e+02 Score=25.19 Aligned_cols=38 Identities=16% Similarity=0.312 Sum_probs=28.1
Q ss_pred cEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 15 RRVILFPLPLQ----------G-HINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 15 ~~il~~~~~~~----------G-H~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
+||+++..... | ...=+....+.|.+.|++|+++++..
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 47887776421 1 45667778888999999999999853
No 344
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=23.73 E-value=74 Score=27.75 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|.++++.++.| + -..++++|+++|++|+++.-
T Consensus 22 k~vlVTGas~g-I--G~aia~~La~~G~~V~~~~r 53 (272)
T 2nwq_A 22 STLFITGATSG-F--GEACARRFAEAGWSLVLTGR 53 (272)
T ss_dssp CEEEESSTTTS-S--HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 67777766543 3 35789999999999998765
No 345
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=23.71 E-value=97 Score=26.28 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCc-cCHH-H-HHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQ-GHIN-P-MLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~-GH~~-p-~l~La~~L~~rGh~Vt~~~~ 50 (463)
.|||+++...-. +-.+ . ...+++.|.++||+|.++--
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 367766654433 3222 2 33466666777999999875
No 346
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=23.70 E-value=1.4e+02 Score=22.02 Aligned_cols=49 Identities=8% Similarity=0.055 Sum_probs=32.7
Q ss_pred hCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 373 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 373 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
..+|+|++--..+.........+ .|+--.+.+.++.++|..+|++++..
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~-~g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQP-LAVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTT-TCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhh-cCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 36788777654444333323444 36655566679999999999999976
No 347
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=23.65 E-value=1e+02 Score=29.94 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|+|++.-.. |-+- ..|++.|.++||+|+.++-.
T Consensus 147 ~m~VLVTGat--G~IG--~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSR--GLVG--RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTT--SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC--CHHH--HHHHHHHHHCCCEEEEEECC
Confidence 6887776433 4333 56899999999999999864
No 348
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=23.61 E-value=1e+02 Score=25.85 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGH--INPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+...+++..|..|+ ..-+..+++.|.++|++|..+--
T Consensus 26 ~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp SEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 34466777777777 67788899999999999866544
No 349
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=23.58 E-value=68 Score=26.53 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..+.+++..|..|+-.-+..+++.|.++|+.|..+-.
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 4456677777778888889999999999998766543
No 350
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=23.52 E-value=2.1e+02 Score=20.69 Aligned_cols=55 Identities=11% Similarity=0.135 Sum_probs=36.0
Q ss_pred hHHHHHhh-----CCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 366 STLESICE-----GVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 366 s~~eal~~-----GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
.+.+.+.. .+|++++--..+.. ...+..+ .|+--.+.+.++.++|.++|+.++..
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~-~~~~~~~-~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 68 DLVKKVRSDSRFKEIPIIMITAEGGKA-EVITALK-AGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp HHHHHHHTSTTCTTCCEEEEESCCSHH-HHHHHHH-HTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCCCCeEEEEeCCCChH-HHHHHHH-cCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 34555543 57777776544433 3344445 37766666679999999999999864
No 351
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=23.50 E-value=51 Score=29.08 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~I~iiG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMG-----GPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTH-----HHHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 578999777666 4578899999999998755
No 352
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=23.49 E-value=2.8e+02 Score=22.06 Aligned_cols=137 Identities=13% Similarity=0.113 Sum_probs=76.4
Q ss_pred CeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCC
Q 012474 276 KSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAV 355 (463)
Q Consensus 276 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~ 355 (463)
++.|-|-+||.. +....+++...|+.++.++=+.+...+ ..|+.+.+. +... --...++
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH--------R~p~~~~~~----------~~~a-~~~g~~V 61 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAH--------RTPKMMVQF----------ASEA-RERGINI 61 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--------TSHHHHHHH----------HHHT-TTTTCCE
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCc--------CCHHHHHHH----------HHHH-HhCCCcE
Confidence 445777788866 666788888889988887655444322 255554221 1000 0122345
Q ss_pred cccccccCh----hhHHHHHhhCCceeccccccchh-hhHHH--HHHHh--hc--eee-cC--CccCHHHHHHHHHHHhc
Q 012474 356 GGFWTHNGW----NSTLESICEGVPMICQPCFGDQL-VNARY--VSHVW--RV--GLH-LE--RKFERREIETAIRRVTV 421 (463)
Q Consensus 356 ~~~I~hgG~----~s~~eal~~GvP~l~~P~~~DQ~-~na~r--v~~~~--G~--G~~-l~--~~~t~~~l~~~i~~~l~ 421 (463)
+|.=.|. .++.-++ .-+|+|.+|...... ..... ..+ + |+ +.+ ++ ...+..-+...|-.+-
T Consensus 62 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~~~- 136 (163)
T 3ors_A 62 --IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLSIQ- 136 (163)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHHTT-
T ss_pred --EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHhCC-
Confidence 8877664 3444444 568999999764321 11112 222 2 44 322 23 1345555555554443
Q ss_pred cchHHHHHHHHHHHHHHHHH
Q 012474 422 EAEGQEMRERIMHLKEKLEL 441 (463)
Q Consensus 422 ~~~~~~~~~~a~~~~~~~~~ 441 (463)
| +.++++.+.+++..++
T Consensus 137 d---~~l~~kl~~~r~~~~~ 153 (163)
T 3ors_A 137 N---PSLVEKLNQYESSLIQ 153 (163)
T ss_dssp C---THHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHH
Confidence 4 5788888888887764
No 353
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=23.40 E-value=75 Score=28.51 Aligned_cols=39 Identities=5% Similarity=0.074 Sum_probs=25.3
Q ss_pred HHHHHHhCCCCCCCceEEEeCCch-hhHHHHHHHcCCCeEEEeCc
Q 012474 100 CLAKLISNGDQEEPVTCLITDAIW-HFAQTVADTLRLPRIVLRTS 143 (463)
Q Consensus 100 ~l~~l~~~~~~~~~pD~VI~D~~~-~~~~~~A~~~giP~v~~~~~ 143 (463)
-++++.+ .+||+||..... .....--+..|||++.+...
T Consensus 76 n~E~i~~-----l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~ 115 (326)
T 3psh_A 76 NIESLLA-----LKPDVVFVTNYAPSEMIKQISDVNIPVVAISLR 115 (326)
T ss_dssp CHHHHHH-----TCCSEEEEETTCCHHHHHHHHTTTCCEEEECSC
T ss_pred CHHHHHc-----cCCCEEEEeCCCChHHHHHHHHcCCCEEEEecc
Confidence 4566665 679999986543 22233445679999987654
No 354
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=23.40 E-value=89 Score=26.81 Aligned_cols=35 Identities=17% Similarity=0.055 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYS-KGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~ 51 (463)
++|.++++.++ |-+ -..+++.|++ +|++|+++.-.
T Consensus 3 ~~k~vlITGas-ggI--G~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGGN-KGI--GLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCEEEESSCS-SHH--HHHHHHHHHHHSSSEEEEEESS
T ss_pred CCCEEEEeCCC-cHH--HHHHHHHHHHhcCCeEEEEeCC
Confidence 34566666554 433 4578999999 99999988753
No 355
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=23.32 E-value=1.1e+02 Score=27.47 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=23.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+.|+|++.- +.|-+ -..|+++|.++||+|+.+.-.
T Consensus 19 ~~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 19 SHMKKVFITG--ICGQI--GSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEeC--CccHH--HHHHHHHHHHCCCEEEEEECC
Confidence 3456665553 22333 357889999999999998753
No 356
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=23.27 E-value=42 Score=32.45 Aligned_cols=36 Identities=17% Similarity=0.383 Sum_probs=27.2
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
-.+++++|.|+-.|..| ..+|..|+++||+|++...
T Consensus 11 ~~~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNR 46 (480)
T ss_dssp ----CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred cccCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 35789999999887655 5689999999999988765
No 357
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=23.21 E-value=33 Score=31.02 Aligned_cols=41 Identities=12% Similarity=-0.019 Sum_probs=25.8
Q ss_pred hhhhccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeC
Q 012474 5 KESNVQQKKGRRVILFPLPLQGHINPMLQLASILYSKG----FSITIIHT 50 (463)
Q Consensus 5 ~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG----h~Vt~~~~ 50 (463)
.+.....++.|||.|+-.|..| ..+|..|.+.| |+|+++..
T Consensus 13 ~~~~~~~~~~mkI~iIG~G~mG-----~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 13 LGTENLYFQSMSVGFIGAGQLA-----FALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp ---------CCCEEEESCSHHH-----HHHHHHHHHTTSSCGGGEEEECS
T ss_pred cCCchhccCCCEEEEECCCHHH-----HHHHHHHHHCCCCCcceEEEECC
Confidence 3444556778999999877654 46788899999 89988754
No 358
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=23.21 E-value=81 Score=27.76 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+.|+++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 10 ~~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 10 TKRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp --CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 35577888877643 3457899999999999888753
No 359
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.10 E-value=63 Score=27.49 Aligned_cols=39 Identities=8% Similarity=0.187 Sum_probs=30.9
Q ss_pred hHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEEeC
Q 012474 96 PFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVLRT 142 (463)
Q Consensus 96 ~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~~~ 142 (463)
...+.+.++.+ .+.|+||.|.. ...+|+++|+|.+.+.+
T Consensus 142 e~~~~i~~l~~-----~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 142 DARGQINELKA-----NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHH-----TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHH-----CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 34457777777 57999999853 57889999999999874
No 360
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=23.08 E-value=81 Score=26.67 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+|.++++.++.| =-.+++++|+++|++|.++.-
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 456677766542 346889999999999988765
No 361
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=22.90 E-value=54 Score=30.07 Aligned_cols=40 Identities=8% Similarity=0.055 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQG-H---INPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|++.||+++..|..+ | +.....++++|.+.||+|+.+...
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i~ 44 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGIT 44 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEEe
Confidence 456789888665444 4 334557899999999999988643
No 362
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=22.89 E-value=89 Score=28.49 Aligned_cols=37 Identities=14% Similarity=0.354 Sum_probs=25.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSK-GFSITIIHTN 51 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 51 (463)
++..|+|+++- +.|.+- ..|+++|.++ ||+|+.++-.
T Consensus 21 ~m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 21 SMKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp --CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred ccCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 35567777654 334443 5788999998 9999999864
No 363
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=22.86 E-value=1.1e+02 Score=25.80 Aligned_cols=36 Identities=6% Similarity=0.048 Sum_probs=27.5
Q ss_pred cEEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGH--INPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..++++..|..|+ ...+..+++.|.++|+.|..+-.
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 83 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDF 83 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcc
Confidence 4566666666655 66688999999999999887755
No 364
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=22.82 E-value=6.6e+02 Score=26.09 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=47.2
Q ss_pred cccccChhhHHHHHhhC-Cc--e--eccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhccchHHHHHHHH
Q 012474 358 FWTHNGWNSTLESICEG-VP--M--ICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVEAEGQEMRERI 432 (463)
Q Consensus 358 ~I~hgG~~s~~eal~~G-vP--~--l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~~~~~~~~~~a 432 (463)
++.||--+.+.|.++-. .| + +.+|-+++-..-...++.. .++.+.|.+++.+++....+..+++..
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~---------gld~~~Iv~~a~~~l~~~~~~~~~~~~ 797 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN---------DMDRYALQAAALKLIDADKYADKIDEL 797 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT---------TCSHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh---------CcCHHHHHHHHHHHcchhhHHHHHHHH
Confidence 44665556667766655 33 3 3333333222334444442 588999999998888743345566666
Q ss_pred HHHHHHHHHHHhhCCC
Q 012474 433 MHLKEKLELSLLEAGS 448 (463)
Q Consensus 433 ~~~~~~~~~~~~~~g~ 448 (463)
+....+.++-..+.|-
T Consensus 798 ~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 798 NAFRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhCC
Confidence 6666666555445554
No 365
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=22.81 E-value=1.1e+02 Score=26.11 Aligned_cols=34 Identities=21% Similarity=0.113 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+.|.++++.++.| =-..++++|+++|++|.++..
T Consensus 6 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 6 KGKVALVTGASRG---IGRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 4577888887754 356899999999999988755
No 366
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=22.78 E-value=1.3e+02 Score=24.31 Aligned_cols=82 Identities=11% Similarity=-0.060 Sum_probs=46.6
Q ss_pred EEEEecCCccc---CCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCC
Q 012474 278 VMYVSFGSIVV---VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPA 354 (463)
Q Consensus 278 ~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~ 354 (463)
+-.++.|+... .....-..+...+++.|..+.+..--.. .++.+.+.+ ...+..++
T Consensus 6 v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~D---------d~~~I~~~l------------~~a~~~~D 64 (172)
T 3kbq_A 6 ASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMD---------DLDEIGWAF------------RVALEVSD 64 (172)
T ss_dssp EEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECS---------CHHHHHHHH------------HHHHHHCS
T ss_pred EEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCC---------CHHHHHHHH------------HHHHhcCC
Confidence 45667776432 2333455577778888887765432110 223332111 22344577
Q ss_pred CcccccccChh-----hHHHHHh--hCCceecccc
Q 012474 355 VGGFWTHNGWN-----STLESIC--EGVPMICQPC 382 (463)
Q Consensus 355 ~~~~I~hgG~~-----s~~eal~--~GvP~l~~P~ 382 (463)
+ +||-||.| -+.||++ .|+++..-|-
T Consensus 65 l--VittGG~g~~~~D~T~ea~a~~~~~~l~~~~e 97 (172)
T 3kbq_A 65 L--VVSSGGLGPTFDDMTVEGFAKCIGQDLRIDED 97 (172)
T ss_dssp E--EEEESCCSSSTTCCHHHHHHHHHTCCCEECHH
T ss_pred E--EEEcCCCcCCcccchHHHHHHHcCCCeeeCHH
Confidence 7 99999987 3566764 6777766664
No 367
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=22.75 E-value=65 Score=29.64 Aligned_cols=39 Identities=15% Similarity=0.087 Sum_probs=31.8
Q ss_pred cEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 15 RRVILFPLP--LQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 15 ~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
||++.+..+ +-|=..-...||..|+++|++|.++-.+..
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q 41 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQ 41 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCC
Confidence 666666644 558888999999999999999999987644
No 368
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=22.74 E-value=91 Score=27.45 Aligned_cols=31 Identities=19% Similarity=0.384 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 7999998776663 468888899999987754
No 369
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=22.71 E-value=92 Score=26.93 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 19 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 19 DGKRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467788777643 346789999999999988765
No 370
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=22.67 E-value=47 Score=32.09 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=27.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+..|+|.|+-.|..| ..+|..|+++||+|++...
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 456899999877655 5689999999999998755
No 371
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=22.65 E-value=98 Score=26.94 Aligned_cols=34 Identities=12% Similarity=0.029 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|.++++.++.| =-.++|++|+++|++|.++.-
T Consensus 29 ~~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 29 EGASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TTEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4467888877654 346799999999999988764
No 372
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=22.59 E-value=1.1e+02 Score=26.11 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.|.++++.++.| =-..++++|+++|++|.++..
T Consensus 4 ~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 4 TKSALVTGASRG---IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp SCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 466777776642 346789999999999988765
No 373
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=22.56 E-value=59 Score=30.85 Aligned_cols=36 Identities=6% Similarity=0.078 Sum_probs=25.5
Q ss_pred cCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 10 QQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 10 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+..+.|||.|+-.|..| +.+|..|++ ||+|+.+-..
T Consensus 32 r~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 32 RGSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp ---CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred cccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 33557899999776545 467778887 9999998754
No 374
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=22.53 E-value=5.3e+02 Score=24.94 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+.|++++. .-.-...+++.|.+-|.+|..+...
T Consensus 363 ~GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 363 HGKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TTCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 467888873 3344567888888899999888763
No 375
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=22.51 E-value=1e+02 Score=26.14 Aligned_cols=38 Identities=8% Similarity=-0.028 Sum_probs=24.3
Q ss_pred HHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEeC
Q 012474 100 CLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLRT 142 (463)
Q Consensus 100 ~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~~ 142 (463)
.++++.+ .+||+||..... .....--+..|||++.+..
T Consensus 49 n~E~i~~-----l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 49 NLERIVA-----LKPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp CHHHHHH-----TCCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred CHHHHhc-----cCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 4566666 679999985321 2223344567999987654
No 376
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=22.49 E-value=1e+02 Score=25.64 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=27.1
Q ss_pred cEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|||+++..-+. |-..-.+.--..+...||+||++...
T Consensus 2 mricifmarglegcgvtkfsleqrdwfiknghevtlvyak 41 (401)
T 1xv5_A 2 MRICIFMARGLEGCGVTKFSLEQRDWFIKNGHEVTLVYAK 41 (401)
T ss_dssp CEEEEEETTCCCSSHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ceEEEEeeccccccCceeeehhhhhhhhcCCcEEEEEEec
Confidence 78887765443 44555666677889999999998764
No 377
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=22.43 E-value=65 Score=29.89 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=28.0
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.++..+|+|+-.|-. -+.+|..|+++|++|+++=..
T Consensus 23 ~~~~~dV~IVGaG~a-----Gl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 23 LLSDKNVAIIGGGPV-----GLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CCTTCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEECS
T ss_pred ccCCCCEEEECCCHH-----HHHHHHHHHHCCCCEEEEeCC
Confidence 345678888877753 478899999999999998653
No 378
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=22.37 E-value=1.1e+02 Score=26.40 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|.++++.++ |- =-..++++|+++|++|+++.-
T Consensus 8 k~vlVTGas-~g--IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTGAA-QG--IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-Cc--HHHHHHHHHHHCCCEEEEEEC
Confidence 456666655 32 246789999999999998765
No 379
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=22.34 E-value=59 Score=29.07 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|||+|+-.|..| ..+|+.|.+.||+|+++..
T Consensus 29 ~~~~I~iIG~G~mG-----~~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 29 TDKKIGFLGLGLMG-----SGIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp CSSCEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEEcccHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 35899999876655 3578889999999988754
No 380
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=22.33 E-value=95 Score=26.64 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|+++++.++.| =-.++|++|+++|++|.++.-.
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 456777777643 3478899999999999887653
No 381
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=22.23 E-value=83 Score=27.14 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=29.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 17 VILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 17 il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
|+|..-|+.|-..-...||..|+++|++|.++-.+..
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~q 40 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCCC
Confidence 4454555678999999999999999999999876543
No 382
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=22.15 E-value=50 Score=31.79 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|++|+|+|+-.|..| ..+|..|.++||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 346889999777655 5678899999999988754
No 383
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=22.14 E-value=39 Score=29.26 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKG----FSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG----h~Vt~~~~ 50 (463)
+.|||.|+-.|..|. .+++.|.++| |+|+++..
T Consensus 3 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp SSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 468999997766553 4678888889 89988755
No 384
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=21.98 E-value=92 Score=26.67 Aligned_cols=34 Identities=9% Similarity=-0.024 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 3466777766643 346899999999999988865
No 385
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=21.93 E-value=1.3e+02 Score=27.36 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCCCCcccccccChhhHH
Q 012474 289 VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHPAVGGFWTHNGWNSTL 368 (463)
Q Consensus 289 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~ 368 (463)
.+.+....+.+++.....+.||.+.++.. .. ++.++++...+-++|.. ||-+.-.....
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~lD~~~i~~~PK~--~~GySDiTaL~ 121 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMN-----------SN--------SLLPYIDYDAFQNNPKI--MIGYSDATALL 121 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSC-----------GG--------GGGGGSCHHHHHHSCCE--EEECGGGHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccccc-----------HH--------HHhhhcChhHHhhCCeE--EEEechHHHHH
Confidence 34566777888888877888887776541 11 56777776666678888 88777777777
Q ss_pred HHHh--hCCceeccccc
Q 012474 369 ESIC--EGVPMICQPCF 383 (463)
Q Consensus 369 eal~--~GvP~l~~P~~ 383 (463)
-+++ .|++.+-=|..
T Consensus 122 ~al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 122 LGIYAKTGIPTFYGPAL 138 (336)
T ss_dssp HHHHHHHCCCEEECCCH
T ss_pred HHHHHhcCceEEECChh
Confidence 7776 58887777753
No 386
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=21.90 E-value=5.5e+02 Score=24.81 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+.|++++. .-.-.+.|++.|.+-|-+|..+...
T Consensus 359 ~Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~ 392 (519)
T 1qgu_B 359 HGKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSH 392 (519)
T ss_dssp TTCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeC
Confidence 466888884 3345678888888899999877663
No 387
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=21.83 E-value=1.1e+02 Score=26.11 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.||.++++.++. -+ -..++++|+++|++|.++..
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcC
Confidence 467888887763 22 46899999999999998765
No 388
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=21.82 E-value=79 Score=27.29 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=28.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
...+++..|..|+..-+..+++.|.++|++|..+-..
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 3455666666677777889999999999998877653
No 389
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=21.82 E-value=1.6e+02 Score=23.54 Aligned_cols=37 Identities=14% Similarity=0.092 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCccCHHHHHH--HHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQ--LASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~--La~~L~~rGh~Vt~~~~ 50 (463)
....+++-.|..|+...+.. +++.|.++|+.|..+-.
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 69 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDL 69 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECC
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecC
Confidence 34566677777788887777 69999999998877654
No 390
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=21.73 E-value=40 Score=31.49 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=26.9
Q ss_pred hhhhhcCCCCcccccccChhhHHHHHhh----CC-ceecccc
Q 012474 346 QQEVLAHPAVGGFWTHNGWNSTLESICE----GV-PMICQPC 382 (463)
Q Consensus 346 q~~lL~~~~~~~~I~hgG~~s~~eal~~----Gv-P~l~~P~ 382 (463)
..++-..+++ +|+=||=||+..|+.. ++ |++.++.
T Consensus 108 ~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 108 EQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 3444556788 9999999999999654 67 7888873
No 391
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=21.73 E-value=1.1e+02 Score=26.29 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+.|+++++.++. -+ -..++++|+++|++|.+...
T Consensus 3 ~~k~vlVTGas~-gI--G~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 3 QNKCALVTGSSR-GV--GKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCCEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 346777777663 23 46789999999999998643
No 392
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=21.68 E-value=91 Score=22.85 Aligned_cols=38 Identities=16% Similarity=-0.000 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEEEe
Q 012474 12 KKGRRVILFPLPLQGHINPML-QLASILYSKGFS-ITIIH 49 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~-Vt~~~ 49 (463)
.+.+||+++|..+.|+-.-.. .|-+.+.++|.+ +.+-.
T Consensus 16 ~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~ 55 (110)
T 3czc_A 16 GSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESAS 55 (110)
T ss_dssp --CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 345789999999998877776 777778888987 65443
No 393
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=21.67 E-value=1.1e+02 Score=27.03 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|+|++.- +.|.+ -..|+++|.++||+|+.++-.
T Consensus 7 ~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITG--GAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEET--TTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEEC--CCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 56666653 33443 357899999999999998764
No 394
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.67 E-value=5.1e+02 Score=24.43 Aligned_cols=90 Identities=19% Similarity=0.274 Sum_probs=52.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCceEEeCCCCCCCcccccccHHHHHHHHHHh
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNFNSPNPSNYPHFSFNSISESLWESEVSTENAISLLTVLNDK 92 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (463)
.+.|++++.-+ .-...+++.|.+-|-+|..+...... ....+.+..+...
T Consensus 311 ~gkrv~i~~~~-----~~~~~l~~~L~elG~~vv~v~~~~~~-------------------------~~~~~~~~~ll~~ 360 (458)
T 1mio_B 311 QGKKVALLGDP-----DEIIALSKFIIELGAIPKYVVTGTPG-------------------------MKFQKEIDAMLAE 360 (458)
T ss_dssp TTCEEEEEECH-----HHHHHHHHHHHTTTCEEEEEEESSCC-------------------------HHHHHHHHHHHHT
T ss_pred CCCEEEEEcCc-----hHHHHHHHHHHHCCCEEEEEEeCCCC-------------------------HHHHHHHHHHHHh
Confidence 45678877543 34567888888889998887753210 0011111111111
Q ss_pred c---C------chHHHHHHHHHhCCCCCCCceEEEeCCchhhHHHHHHHcCCCeEEE
Q 012474 93 C---V------VPFQDCLAKLISNGDQEEPVTCLITDAIWHFAQTVADTLRLPRIVL 140 (463)
Q Consensus 93 ~---~------~~l~~~l~~l~~~~~~~~~pD~VI~D~~~~~~~~~A~~~giP~v~~ 140 (463)
. . ..+.+ ++++.+. .+||++|.+.. ...+|+++|+|++.+
T Consensus 361 ~~~~~~~v~~~~d~~~-l~~~i~~----~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 361 AGIEGSKVKVEGDFFD-VHQWIKN----EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp TTCCSCEEEESCBHHH-HHHHHHH----SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCCCEEEECCCHHH-HHHHHHh----cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 1 1 12222 3333322 57999998864 577889999999975
No 395
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=21.66 E-value=46 Score=29.17 Aligned_cols=35 Identities=9% Similarity=0.178 Sum_probs=23.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
...++|++.- +.|-+ -..|+++|.++||+|+.+.-
T Consensus 10 ~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 10 HHHMKILITG--ANGQL--GREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp --CEEEEEES--TTSHH--HHHHHHHHTTSSEEEEEECT
T ss_pred cccceEEEEC--CCChH--HHHHHHHHHhCCCeEEeccC
Confidence 3456666553 33444 45688999999999998765
No 396
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=21.65 E-value=4.1e+02 Score=25.81 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.+.|++++..+. + ...+++.|.+-|-+|..+.+..
T Consensus 334 ~GKrv~i~~~~~--~---~~~l~~~l~ElGm~vv~~~t~~ 368 (533)
T 1mio_A 334 QGKTACLYVGGS--R---SHTYMNMLKSFGVDSLVAGFEF 368 (533)
T ss_dssp TTCEEEEEESSS--H---HHHHHHHHHHHTCEEEEEEESS
T ss_pred CCCEEEEECCch--H---HHHHHHHHHHCCCEEEEEEecc
Confidence 466888876553 3 4556667777899999988644
No 397
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=21.63 E-value=62 Score=27.88 Aligned_cols=32 Identities=6% Similarity=0.007 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.|||+|+-.|..| ..+++.|.+.||+|+++..
T Consensus 3 ~m~i~iiG~G~mG-----~~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 3 AMKIGIIGVGKMA-----SAIIKGLKQTPHELIISGS 34 (259)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHTTSSCEEEEECS
T ss_pred ccEEEEECCCHHH-----HHHHHHHHhCCCeEEEECC
Confidence 4899999766554 3578889999999877654
No 398
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=21.47 E-value=52 Score=27.60 Aligned_cols=35 Identities=14% Similarity=0.095 Sum_probs=26.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..+++-.|..|+..-+..+++.|.++|++|..+--
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~ 39 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVEL 39 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECC
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecC
Confidence 44555566556666678999999999999877755
No 399
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=21.46 E-value=56 Score=30.53 Aligned_cols=31 Identities=19% Similarity=0.316 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|+|+|+-.|..| +..|..|+++|++|+++=.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeC
Confidence 567777666544 7888999999999999954
No 400
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=21.38 E-value=1.3e+02 Score=28.73 Aligned_cols=92 Identities=18% Similarity=0.150 Sum_probs=48.3
Q ss_pred hccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccC
Q 012474 266 CISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAP 345 (463)
Q Consensus 266 l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp 345 (463)
+.+++...+.+++++|+-++... ...+.+.+.|++.+..+.+..-.+. +-.+.+.+ ..+.+-
T Consensus 82 l~~~l~~~g~~rvlIVtd~~~~~---~~~~~v~~~L~~~gi~~~~~~~~ge--------~~~~~v~~-------~~~~~~ 143 (450)
T 1ta9_A 82 SYMYVKKWATKSAVVLADQNVWN---ICANKIVDSLSQNGMTVTKLVFGGE--------ASLVELDK-------LRKQCP 143 (450)
T ss_dssp HHHHHTTTCSSEEEEEEEHHHHH---HTHHHHHHHHHHTTCEEEEEEECSC--------CCHHHHHH-------HHTTSC
T ss_pred HHHHHHhcCCCEEEEEECccHHH---HHHHHHHHHHHHCCCeEEEEeeCCC--------CCHHHHHH-------HHHHHh
Confidence 33444443333566666333221 2466777888777766532221111 01123321 111111
Q ss_pred hhhhhcCCCCcccccccChhhHHHH-----HhhCCceeccccc
Q 012474 346 QQEVLAHPAVGGFWTHNGWNSTLES-----ICEGVPMICQPCF 383 (463)
Q Consensus 346 q~~lL~~~~~~~~I~hgG~~s~~ea-----l~~GvP~l~~P~~ 383 (463)
+ ++++ +|.=|| ||+.++ ...|+|++.+|..
T Consensus 144 --~---~~D~--IIAvGG-GSviD~AK~iA~~~giP~I~IPTT 178 (450)
T 1ta9_A 144 --D---DTQV--IIGVGG-GKTMDSAKYIAHSMNLPSIICPTT 178 (450)
T ss_dssp --T---TCCE--EEEEES-HHHHHHHHHHHHHTTCCEEEEESS
T ss_pred --h---CCCE--EEEeCC-cHHHHHHHHHHHhcCCCEEEEeCC
Confidence 1 4566 998877 566554 4469999999975
No 401
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=21.37 E-value=1.3e+02 Score=24.86 Aligned_cols=38 Identities=8% Similarity=0.116 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGH----INPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
...++|.+++... +. ..-...|+++|+++|+.|..-..
T Consensus 20 ~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG 61 (199)
T 3qua_A 20 DRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGG 61 (199)
T ss_dssp -CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 3457899997665 32 45667888999999998755433
No 402
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=21.35 E-value=88 Score=27.35 Aligned_cols=37 Identities=8% Similarity=-0.079 Sum_probs=24.4
Q ss_pred HHHHHHhCCCCCCCceEEEeCCch--hhHHHHHHHcCCCeEEEe
Q 012474 100 CLAKLISNGDQEEPVTCLITDAIW--HFAQTVADTLRLPRIVLR 141 (463)
Q Consensus 100 ~l~~l~~~~~~~~~pD~VI~D~~~--~~~~~~A~~~giP~v~~~ 141 (463)
.++++.+ .+||+||..... .....--+..|||++.+.
T Consensus 51 n~E~i~~-----l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 51 AAEGVLA-----LRPDILIGTEEMGPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp CHHHHHT-----TCCSEEEECTTCCCHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHh-----cCCCEEEEeCccCcHHHHHHHHHcCCcEEEec
Confidence 4566665 689999986532 223344456899988763
No 403
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=21.31 E-value=1.7e+02 Score=26.28 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhc-CCCCcccccccChhhH
Q 012474 289 VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLA-HPAVGGFWTHNGWNST 367 (463)
Q Consensus 289 ~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~-~~~~~~~I~hgG~~s~ 367 (463)
.+.+....+.+++.....+.||.+.++.. .. ++.++++...+-+ ++.. ||-+.-....
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-----------a~--------rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG-----------CG--------QLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC-----------GG--------GGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC-----------HH--------HHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 45566777888888877788888776541 11 5667776666666 7888 8888877777
Q ss_pred HHHHh-hCCceeccccc
Q 012474 368 LESIC-EGVPMICQPCF 383 (463)
Q Consensus 368 ~eal~-~GvP~l~~P~~ 383 (463)
.-|++ .|++.+-=|..
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 77876 37777776654
No 404
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=21.30 E-value=98 Score=30.11 Aligned_cols=40 Identities=13% Similarity=0.240 Sum_probs=32.5
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 012474 14 GRRVILFPLPLQ---GHINPMLQLASILYSKGFSITIIHTNFN 53 (463)
Q Consensus 14 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 53 (463)
+||.+|++.|-. |-=.-.-.|+..|..||++||.+--++.
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpy 44 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPY 44 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcc
Confidence 478999998843 5556788999999999999999876543
No 405
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=21.25 E-value=1.2e+02 Score=26.37 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
..+.|.++++.++.| =-.++|++|+++|++|.++.-.
T Consensus 11 ~~~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSG---IGLAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp TTTTCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 445667777777642 3467899999999999887753
No 406
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=21.25 E-value=1.4e+02 Score=21.14 Aligned_cols=35 Identities=9% Similarity=0.007 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.+...|++++..+ ......++.|.+.|++|.++..
T Consensus 54 ~~~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 54 NKNEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp CTTSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 3456788888654 3466788999999998887754
No 407
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.25 E-value=1.1e+02 Score=26.46 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|+++++.++. -+ -..+++.|+++|++|+++.-
T Consensus 20 ~~k~~lVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 20 RGRVALVTGGSR-GL--GFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TTCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 456777776653 23 46889999999999988765
No 408
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=21.25 E-value=1.1e+02 Score=25.80 Aligned_cols=32 Identities=25% Similarity=0.169 Sum_probs=23.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
||.++++.++ |-+ -..++++|+++|++|+++.
T Consensus 1 ~k~vlITGas-ggi--G~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 1 MRKALITGAS-RGI--GRAIALRLAEDGFALAIHY 32 (245)
T ss_dssp CCEEEETTTT-SHH--HHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEc
Confidence 3456666554 433 4578999999999999873
No 409
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=21.21 E-value=1e+02 Score=27.13 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
.|+++++.++.| =-..+++.|+++|++|+++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 467778776643 34689999999999999887
No 410
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=21.21 E-value=1.3e+02 Score=26.56 Aligned_cols=33 Identities=9% Similarity=0.106 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
|+|++.- +.|-+ -..|+++|.++||+|+.++-.
T Consensus 3 ~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTG--GTGFL--GQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC--CCcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 5666653 33433 356789999999999999874
No 411
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=21.14 E-value=89 Score=27.34 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|+++++.++.| =-..+|++|+++|++|.++..
T Consensus 24 ~~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 24 MTKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467777777643 346899999999999988764
No 412
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=21.05 E-value=85 Score=27.82 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=23.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|+|++. |+.|.+ -..|+++|.++||+|+++..
T Consensus 2 ~~~~ilVt--GatG~i--G~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 2 AKQRVFIA--GHRGMV--GSAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp CCEEEEEE--TTTSHH--HHHHHHHHTTCTTEEEECCC
T ss_pred CCCEEEEE--CCCcHH--HHHHHHHHHhCCCeEEEEec
Confidence 34677665 344544 35678999999999887653
No 413
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=21.04 E-value=1.3e+02 Score=27.07 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=23.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
++.|+|++.- +.|-+ -..|+++|.++||+|+.+..
T Consensus 25 ~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILITG--GAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEEc--CccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3456666553 33433 35788999999999999875
No 414
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=20.97 E-value=59 Score=30.26 Aligned_cols=43 Identities=16% Similarity=-0.007 Sum_probs=24.2
Q ss_pred hccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEE
Q 012474 266 CISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLW 310 (463)
Q Consensus 266 l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~ 310 (463)
+.+++...+.+++++|+-++.. .....+.+.+.|++.+..+.+
T Consensus 22 l~~~~~~~g~~~~liVtd~~~~--~~g~~~~v~~~L~~~gi~~~~ 64 (383)
T 3ox4_A 22 AIKDLNGSGFKNALIVSDAFMN--KSGVVKQVADLLKAQGINSAV 64 (383)
T ss_dssp HHHTTTTSCCCEEEEEEEHHHH--HTTHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCCEEEEEECCchh--hCchHHHHHHHHHHcCCeEEE
Confidence 3344444444556666644322 223567788888887776543
No 415
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=20.95 E-value=60 Score=30.60 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.++||+++-+|-. -..+++.|.++||+|+++-.+
T Consensus 3 ~~~~viIiG~Gr~-----G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 3 HGMRVIIAGFGRF-----GQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp -CCSEEEECCSHH-----HHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEECCCHH-----HHHHHHHHHHCCCCEEEEECC
Confidence 4678998876543 467899999999999999875
No 416
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=20.93 E-value=81 Score=30.22 Aligned_cols=32 Identities=9% Similarity=0.150 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~ 50 (463)
.|||+|+-.|..| ..+|..|+++ ||+|+++..
T Consensus 5 ~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 5 IKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred ccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 4799999776655 5678888888 899998865
No 417
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=20.77 E-value=2.4e+02 Score=22.90 Aligned_cols=38 Identities=8% Similarity=0.075 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTNF 52 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 52 (463)
.+||+++.+++. ...-+....+.|.+.|++|++++...
T Consensus 3 ~~~v~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 3 SKRALVILAKGA-EEMETVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCEEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 468888888764 34455667788889999999999753
No 418
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=20.67 E-value=1.4e+02 Score=26.89 Aligned_cols=79 Identities=9% Similarity=0.054 Sum_probs=46.9
Q ss_pred CCeEEEEecCCccc-CCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccChhhhhcCC
Q 012474 275 AKSVMYVSFGSIVV-VNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQQEVLAHP 353 (463)
Q Consensus 275 ~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq~~lL~~~ 353 (463)
++.+-.|+..|... ...+.++..++.|++.|.+++. +........ -+...-++|.. .-++.+..+
T Consensus 12 GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~--~~~~~~~~~---~~agtd~~Ra~---------dL~~a~~Dp 77 (327)
T 4h1h_A 12 GDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTF--GEHVAEMDC---MMSSSIRSRVA---------DIHEAFNDS 77 (327)
T ss_dssp TCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEE--CTTTTCCCT---TSSCCHHHHHH---------HHHHHHHCT
T ss_pred CCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEE--CcchhhccC---cccCCHHHHHH---------HHHHHhhCC
Confidence 55677777766543 4567788888889998888654 222211101 11111112211 236678889
Q ss_pred CCccccc-ccChhhH
Q 012474 354 AVGGFWT-HNGWNST 367 (463)
Q Consensus 354 ~~~~~I~-hgG~~s~ 367 (463)
+++++++ .||+|++
T Consensus 78 ~i~aI~~~rGG~g~~ 92 (327)
T 4h1h_A 78 SVKAILTVIGGFNSN 92 (327)
T ss_dssp TEEEEEESCCCSCGG
T ss_pred CCCEEEEcCCchhHH
Confidence 9888886 5888875
No 419
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=20.62 E-value=1.7e+02 Score=25.13 Aligned_cols=37 Identities=19% Similarity=0.332 Sum_probs=28.0
Q ss_pred cEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQ----------G-HINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~----------G-H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.||+++..... | +..=++.-.+.|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46777766531 2 3555788888999999999999984
No 420
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=20.60 E-value=1.1e+02 Score=26.26 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..|+++++.++.| + -..+|++|+++|++|.++..
T Consensus 10 ~~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPA-L--GTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 3467777777643 2 46889999999999988765
No 421
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=20.57 E-value=1.1e+02 Score=26.16 Aligned_cols=37 Identities=14% Similarity=0.115 Sum_probs=26.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 11 QKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 11 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
...+.|.++++.++.| =-..+|++|+++|++|.++..
T Consensus 9 ~~~~~k~vlITGas~g---iG~~ia~~l~~~G~~v~~~~~ 45 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGG---IGTSICQRLHKDGFRVVAGCG 45 (256)
T ss_dssp ----CEEEEETTTTSH---HHHHHHHHHHHTTEEEEEEEC
T ss_pred CCCCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3456778888877643 346899999999999988774
No 422
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=20.57 E-value=83 Score=26.42 Aligned_cols=35 Identities=9% Similarity=0.123 Sum_probs=26.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
..+++-.|..|+..-...+++.|.++|++|..+--
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEecc
Confidence 45555566667777778999999999999877755
No 423
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=20.57 E-value=4.6e+02 Score=24.49 Aligned_cols=32 Identities=16% Similarity=0.057 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSK-GFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~ 50 (463)
.|||+++..++ ....+++.|+++ |++++++.+
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~ 56 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAP 56 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEE
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 47899987763 356778888765 898777765
No 424
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=20.55 E-value=65 Score=29.11 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
++.+||.|+-.|..| ..+|..|+++||+|+++..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 345789999776655 5788999999999998765
No 425
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=20.51 E-value=1.1e+02 Score=26.49 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
+-|+++++.++.| =-.++|+.|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 5589999988764 247889999999999988765
No 426
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=20.49 E-value=98 Score=26.42 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.|.++++.++. - =-..+|++|+++|++|.++.-.
T Consensus 22 ~k~vlITGas~-g--IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILVLGGSG-A--LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 35677776653 2 3468999999999999888764
No 427
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=20.47 E-value=1e+02 Score=27.94 Aligned_cols=37 Identities=16% Similarity=0.127 Sum_probs=27.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+|++++..|..|.-.-...+.+.|.++|+++.+..+.
T Consensus 30 ~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~ 66 (332)
T 2bon_A 30 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTW 66 (332)
T ss_dssp CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECC
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEec
Confidence 3688888886655455667888999999999887663
No 428
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=20.46 E-value=2.9e+02 Score=21.32 Aligned_cols=38 Identities=16% Similarity=0.023 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCcc---CHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQG---HINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~G---H~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
...++++++|+.+ ...-+..++++|.+.+.++.+++..
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 60 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDG 60 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCS
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 3456778888776 5556778888998778888888764
No 429
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=20.42 E-value=1.1e+02 Score=26.62 Aligned_cols=35 Identities=11% Similarity=-0.002 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012474 14 GRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 14 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
.+|.++++.++ |-+ -..++++|+++|++|.++...
T Consensus 4 ~~k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 4 SAKVWLVTGAS-SGF--GRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 34677777766 333 457899999999999887653
No 430
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=20.37 E-value=1.2e+02 Score=24.59 Aligned_cols=36 Identities=19% Similarity=0.349 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccCHHHHH-HHHHHHHh-CCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPML-QLASILYS-KGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l-~La~~L~~-rGh~Vt~~~~ 50 (463)
|||+++-....|+..-+. .+++.|.+ .|++|.++.-
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l 39 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRV 39 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEEC
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEc
Confidence 578887777678876654 45666666 7999988765
No 431
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=20.36 E-value=1.4e+02 Score=25.50 Aligned_cols=32 Identities=22% Similarity=0.247 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|.++++.++ |-+ -..++++|+++|++|+++.-
T Consensus 15 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 15 KVALVTAST-DGI--GLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp CEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 566666554 323 46789999999999998765
No 432
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=20.34 E-value=1e+02 Score=26.62 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 16 RVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 16 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|.++++.++.| =-..+++.|+++|++|+++.-
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 46677766543 346789999999999998865
No 433
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=20.33 E-value=1.2e+02 Score=26.70 Aligned_cols=32 Identities=19% Similarity=0.367 Sum_probs=21.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|+|++.- +.|-+ -..|+++|.++||+|+.+..
T Consensus 1 m~vlVTG--atG~i--G~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTG--GAGFI--GSHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHTTTCEEEEECC
T ss_pred CEEEEEe--CCcHH--HHHHHHHHHHCCCEEEEEEC
Confidence 5655543 33433 35678999999999988754
No 434
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.30 E-value=87 Score=22.60 Aligned_cols=47 Identities=4% Similarity=-0.048 Sum_probs=32.7
Q ss_pred hCCceeccccccchhhhHHHHHHHhhceeecCCccCHHHHHHHHHHHhcc
Q 012474 373 EGVPMICQPCFGDQLVNARYVSHVWRVGLHLERKFERREIETAIRRVTVE 422 (463)
Q Consensus 373 ~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~t~~~l~~~i~~~l~~ 422 (463)
..+|++++ ..+.........+ .|+--.+.+.++.++|.+.|+.++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHcC
Confidence 46888888 3344444455555 37655555579999999999998864
No 435
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=20.28 E-value=47 Score=29.87 Aligned_cols=37 Identities=14% Similarity=0.048 Sum_probs=26.7
Q ss_pred ccCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 9 VQQKKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 9 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
...+...+|+++-.|..| +..|..|+++|++|+++-.
T Consensus 9 ~~~~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~ 45 (335)
T 2a87_A 9 RAHHPVRDVIVIGSGPAG-----YTAALYAARAQLAPLVFEG 45 (335)
T ss_dssp -CCCCCEEEEEECCHHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred cccCCcCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEec
Confidence 334456678888766433 6788888899999999874
No 436
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=20.25 E-value=1.1e+02 Score=24.54 Aligned_cols=35 Identities=11% Similarity=0.142 Sum_probs=25.0
Q ss_pred EEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 16 RVILFPLPLQG----HINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 16 ~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.|.++.....+ +..-...|+++|+++|+.|..=..
T Consensus 3 ~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg 41 (171)
T 1weh_A 3 LLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGY 41 (171)
T ss_dssp EEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCS
T ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCCh
Confidence 47788776554 456788899999999976655444
No 437
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=20.09 E-value=1e+02 Score=29.29 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 12 KKGRRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 12 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
.+..||+|+-.+..| +.+|+.|+++||+|+..-.
T Consensus 7 ~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 356789999987654 3469999999999998755
No 438
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=20.08 E-value=70 Score=28.13 Aligned_cols=31 Identities=10% Similarity=0.197 Sum_probs=24.4
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPL-PLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|||+|+-. |..| ..+++.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 69999977 6544 5678899999999987654
No 439
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=20.03 E-value=67 Score=30.02 Aligned_cols=31 Identities=23% Similarity=0.388 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012474 15 RRVILFPLPLQGHINPMLQLASILYSKGFSITIIHT 50 (463)
Q Consensus 15 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 50 (463)
|+|+|+-.|..| +..|..|+++|++|+++=.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 1 MRAVVVGAGLGG-----LLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 577777766544 7889999999999999854
No 440
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=20.03 E-value=63 Score=30.12 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=43.0
Q ss_pred ccccccCCCCeEEEEecCCcccCCHHHHHHHHHHHhcCCCceEEEEcCCCCCCCccCCCCchhHHHHhcCCCceeeccCh
Q 012474 267 ISWLDKQAAKSVMYVSFGSIVVVNVTEFLEIAWGLANSRVPFLWVVRPGLVPGVEWLEPLPKGFLEMLDGRGHIVKWAPQ 346 (463)
Q Consensus 267 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpq 346 (463)
.+++...+ +++++|+-.+... ...+.+.+.|++ +..+++..-.+. +-.+.+.+ ..+..-.
T Consensus 45 ~~~l~~~g-~r~liVtd~~~~~---~~~~~v~~~L~~-g~~~~~~~~~~~--------p~~~~v~~-------~~~~~~~ 104 (387)
T 3uhj_A 45 AAYLAPLG-KRALVLIDRVLFD---ALSERIGKSCGD-SLDIRFERFGGE--------CCTSEIER-------VRKVAIE 104 (387)
T ss_dssp HHHHGGGC-SEEEEEECTTTHH---HHHHHC-------CCEEEEEECCSS--------CSHHHHHH-------HHHHHHH
T ss_pred HHHHHHcC-CEEEEEECchHHH---HHHHHHHHHHHc-CCCeEEEEcCCC--------CCHHHHHH-------HHHHHhh
Confidence 33444433 5566666443321 256677788887 777643322111 11122321 1111100
Q ss_pred hhhhcCCCCcccccccChhhHHHH-----HhhCCceeccccc
Q 012474 347 QEVLAHPAVGGFWTHNGWNSTLES-----ICEGVPMICQPCF 383 (463)
Q Consensus 347 ~~lL~~~~~~~~I~hgG~~s~~ea-----l~~GvP~l~~P~~ 383 (463)
..+++ +|.=|| ||+.++ ...|+|++.+|..
T Consensus 105 ----~~~d~--IIavGG-Gs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 105 ----HGSDI--LVGVGG-GKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp ----HTCSE--EEEESS-HHHHHHHHHHHHHTTCEEEECCSS
T ss_pred ----cCCCE--EEEeCC-cHHHHHHHHHHHhcCCCEEEecCc
Confidence 13566 998888 666654 4579999999975
No 441
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.03 E-value=1.8e+02 Score=21.48 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=25.8
Q ss_pred EEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeCC
Q 012474 17 VILFPLPLQGHI--NPMLQLASILYSKGFSITIIHTN 51 (463)
Q Consensus 17 il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~ 51 (463)
+.++..+-+|+. .-.+.+|..+.+.||+|.++-..
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 444555555765 56788999999999999987764
No 442
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=20.03 E-value=1.1e+02 Score=25.17 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=24.3
Q ss_pred EEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEe
Q 012474 16 RVILFPLPLQG----HINPMLQLASILYSKGFSITIIH 49 (463)
Q Consensus 16 ~il~~~~~~~G----H~~p~l~La~~L~~rGh~Vt~~~ 49 (463)
+|.++.....| +..-...|+++|+++|+.|..=.
T Consensus 3 ~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GG 40 (191)
T 1t35_A 3 TICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGG 40 (191)
T ss_dssp EEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 48888876543 34567888899999998865543
No 443
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=20.01 E-value=1.7e+02 Score=24.51 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC
Q 012474 13 KGRRVILFPLPLQGHINPMLQLASILYSK--GFSITIIHTN 51 (463)
Q Consensus 13 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~ 51 (463)
+.++|++.- +.|-+ -..++++|.++ ||+|+.++..
T Consensus 3 ~~~~ilVtG--asG~i--G~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 3 NLPTVLVTG--ASGRT--GQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp SCCEEEEES--TTSHH--HHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCEEEEEc--CCcHH--HHHHHHHHHhcCCCcEEEEEEcC
Confidence 345665553 33433 45789999999 8999998763
Done!